Citrus Sinensis ID: 024488

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------
Protein Sequence
MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTDRRL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEcccccHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHcccccccEEEEcccccHHHHHHHHHcccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccEEEEcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHccccHHHHHHHHcccccccEEEEcccccHHHHHHHHHHccccEEEEccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEHHHHcccccccEccccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccHHHHccHcccc
Coil and Loop (DISEMBL)
mlnfgrartqqrqtrptsfggldyadpkrksnfAGKFILAAALTALCIFLlkqsptfsspspfsqheegVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVdnlsrgnigAVKVLQelfpepgrlQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVgestldplkyyhnitsNTLVVLESMARhgvdtliysstcatygepekmpiteetpqapinpygkAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIkinptdrrl
Flexible Loop (DISEMBL)
mlnfgrartqqrqtrptsfggldyadPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPekmpiteetpqapiNPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFvikinptdrrl
Low Complexity Region (SEG)
MLNFGRArtqqrqtrptSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQsptfsspspfsQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTDRRL
Disordered region (IsUnstruct)
*******************************NFAGKFILAAALTALCIFLLKQ***************GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG************************MAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKIN******
Disordered Region (DISOPRED)
**************************PKRKSNFAGKFILAAALTALCIFLLK*******************HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVI**N******
Disordered Region (DISEMBL)
****************TSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTF**********EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTDRRL
Disordered Region (DISPRO)
**********************DYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSPSPFSQ*EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTDRRL
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTDRRL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	267	2.2.26 [Sep-21-2011]
Q9SA77	419	UDP-arabinose 4-epimerase	yes	no	0.943	0.601	0.823	1e-123
Q9SUN3	411	Probable UDP-arabinose 4-	no	no	0.940	0.610	0.807	1e-119
O64749	417	Putative UDP-arabinose 4-	no	no	0.940	0.601	0.811	1e-119
Q8H0B6	391	Probable UDP-arabinose 4-	yes	no	0.865	0.590	0.786	1e-106
Q8H0B2	406	Probable UDP-arabinose 4-	no	no	0.917	0.603	0.734	1e-105
Q8H930	421	Probable UDP-arabinose 4-	no	no	0.943	0.598	0.733	1e-104
Q9FI17	436	Putative UDP-arabinose 4-	no	no	0.943	0.577	0.698	7e-99
Q9SN58	351	UDP-glucose 4-epimerase 2	no	no	0.655	0.498	0.446	9e-37
Q9T0A7	350	UDP-glucose 4-epimerase 3	no	no	0.651	0.497	0.443	2e-36
P55180	339	UDP-glucose 4-epimerase O	yes	no	0.644	0.507	0.434	3e-36

>sp|Q9SA77|ARAE1_ARATH UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana GN=MUR4 PE=1 SV=1

 Score =  441 bits (1134), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 210/255 (82%), Positives = 231/255 (90%), Gaps = 3/255 (1%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           M +FGRAR+Q RQ R  S GGLDYADPK+K+N+ GK +L A+LTALCIF+LKQSPTF++P
Sbjct: 1   MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S FS+HE GVTHVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGN+ AV++LQELFPE
Sbjct: 61  SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGDAKAVNK F+ENAFDAVMHFAAVAYVGEST  PLKYYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA HGV TLIYSSTCATYGEP+ MPITEETPQ PINPYGKAKKMAEDIILDFSKNSDM
Sbjct: 181 ETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDM 240

Query: 241 AVMILRLVVFFTLVA 255
           AVMILR   +F ++ 
Sbjct: 241 AVMILR---YFNVIG 252

Acts as a UDP-D-xylose 4-epimerase but lacks both UDP-D-glucose and UDP-D-glucuronic acid 4-epimerase activities in vitro.
Arabidopsis thaliana (taxid: 3702)
EC: 5EC: .EC: 1EC: .EC: 3EC: .EC: 5

>sp|Q9SUN3|ARAE3_ARATH Probable UDP-arabinose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g20460 PE=2 SV=3

 Score =  427 bits (1097), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 206/255 (80%), Positives = 227/255 (89%), Gaps = 4/255 (1%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           ML+F RAR+Q R TRP   GG++Y +PKRKSN  GK IL  +LTALCIF+LK +P+F+SP
Sbjct: 1   MLSFSRARSQGRNTRPLG-GGMEYLEPKRKSNVMGKIILVVSLTALCIFMLKHAPSFTSP 59

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           + FS+ EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN+GAVKVLQ LFPE
Sbjct: 60  TAFSRSEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKVLQGLFPE 119

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGDAKAV+K FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL
Sbjct: 120 PGRLQFIYADLGDAKAVDKIFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 179

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E++ARH V  LIYSSTCATYGEP+KMPI E TPQ PINPYGKAKKMAED+ILDFSKNSDM
Sbjct: 180 EAVARHKVKKLIYSSTCATYGEPDKMPIVEVTPQVPINPYGKAKKMAEDMILDFSKNSDM 239

Query: 241 AVMILRLVVFFTLVA 255
           AVMILR   +F ++ 
Sbjct: 240 AVMILR---YFNVIG 251

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|O64749|ARAE2_ARATH Putative UDP-arabinose 4-epimerase 2 OS=Arabidopsis thaliana GN=At2g34850 PE=2 SV=3

 Score =  426 bits (1095), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 207/255 (81%), Positives = 224/255 (87%), Gaps = 4/255 (1%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           MLN GRART  RQ R  SF GLD+ADPK+ +N+ GK +L   LTA+CI LL QSPTF++P
Sbjct: 1   MLNLGRARTG-RQNRSMSFEGLDFADPKKNNNYMGKIVLVMTLTAMCILLLNQSPTFNTP 59

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S FS+ E GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN+GAVK+LQ+LFPE
Sbjct: 60  SVFSRSEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKILQQLFPE 119

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PG+LQFIYADLGDA AVNK FSENAFDAVMHFAAVAYVGEST  PLKYYHNITSNTLVVL
Sbjct: 120 PGKLQFIYADLGDANAVNKIFSENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 179

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA HGV TLIYSSTCATYGEPEKMPITEETPQ PINPYGKAKKMAEDIILDFSKNS M
Sbjct: 180 ETMAAHGVKTLIYSSTCATYGEPEKMPITEETPQVPINPYGKAKKMAEDIILDFSKNSIM 239

Query: 241 AVMILRLVVFFTLVA 255
           AVMILR   +F ++ 
Sbjct: 240 AVMILR---YFNVIG 251

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|Q8H0B6|ARAE2_ORYSJ Probable UDP-arabinose 4-epimerase 2 OS=Oryza sativa subsp. japonica GN=UEL-2 PE=2 SV=1

 Score =  384 bits (987), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 184/234 (78%), Positives = 205/234 (87%), Gaps = 3/234 (1%)

Query: 22  LDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSPSPFSQHEEGVTHVLVTGGAGY 81
           +D+ D +RK N  GKF +A ALT +CI +LKQSP F+S S FS+HE GVTHVLVTGGAGY
Sbjct: 1   MDFGDSRRKPNVVGKFTVAVALTVMCIIVLKQSPGFTSTSVFSRHEIGVTHVLVTGGAGY 60

Query: 82  IGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFF 141
           IGSHA LRLL+D+YRVTIVDNLSRGN+GAV+VLQ LFPEPGRLQFIYADLGDAKAVNK F
Sbjct: 61  IGSHATLRLLRDNYRVTIVDNLSRGNMGAVRVLQRLFPEPGRLQFIYADLGDAKAVNKIF 120

Query: 142 SENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG 201
           SENAFDAVMHFAAVAYVGESTL+PL+YYHNITSNTL VLE+MA + V TLIYSSTCATYG
Sbjct: 121 SENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAAYNVKTLIYSSTCATYG 180

Query: 202 EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVA 255
           EP+ MPITE TPQ PINPYGKAKKMAEDIILDFSK S+MAVMILR   +F ++ 
Sbjct: 181 EPDTMPITEATPQNPINPYGKAKKMAEDIILDFSKRSEMAVMILR---YFNVIG 231

Oryza sativa subsp. japonica (taxid: 39947)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|Q8H0B2|ARAE3_ORYSJ Probable UDP-arabinose 4-epimerase 3 OS=Oryza sativa subsp. japonica GN=UEL-3 PE=2 SV=1

 Score =  380 bits (975), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 188/256 (73%), Positives = 210/256 (82%), Gaps = 11/256 (4%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           M+   R  +Q R       GG++Y D +RK +  GK I A  LT LCIF+LKQSP F   
Sbjct: 1   MIPLNRRASQTR-------GGMEYFDARRKPHNVGKVIAALVLTTLCIFILKQSPGFGGS 53

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S FS+HE GVTHVLVTGGAGYIGSHA+LRLLKD+YRVTIVDNLSRGN+GAVKVLQELFP+
Sbjct: 54  SVFSRHEPGVTHVLVTGGAGYIGSHASLRLLKDNYRVTIVDNLSRGNMGAVKVLQELFPQ 113

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGD K VNK F+ENAFDAVMHFAAVAYVGESTL+PL+YYHNITSNTL++L
Sbjct: 114 PGRLQFIYADLGDQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLIL 173

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN-SD 239
           E+MA HGV TLIYSSTCATYGEPEKMPI E T Q PINPYGKAKKMAEDIILDF+K   D
Sbjct: 174 EAMASHGVKTLIYSSTCATYGEPEKMPIVETTRQLPINPYGKAKKMAEDIILDFTKGRKD 233

Query: 240 MAVMILRLVVFFTLVA 255
           MAVMILR   +F ++ 
Sbjct: 234 MAVMILR---YFNVIG 246

Oryza sativa subsp. japonica (taxid: 39947)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|Q8H930|ARAE1_ORYSJ Probable UDP-arabinose 4-epimerase 1 OS=Oryza sativa subsp. japonica GN=UEL-1 PE=2 SV=2

 Score =  378 bits (971), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 190/259 (73%), Positives = 213/259 (82%), Gaps = 7/259 (2%)

Query: 1   MLNFGRARTQQRQTRPTSF-GGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFS- 58
           ML   R R QQR  R   F   +D++DPKRK  +  K ++ A LTA+C+ +L Q P    
Sbjct: 1   MLPTNRNRPQQRPARSWYFISDMDFSDPKRKPRYLSKILMVALLTAMCVVMLTQPPCHRR 60

Query: 59  SPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF 118
           +PS FS HE GVTHVLVTGGAGYIGSHAALRLLKDS+RVTIVDNLSRGN+GA+KVLQ LF
Sbjct: 61  TPSVFSIHEPGVTHVLVTGGAGYIGSHAALRLLKDSFRVTIVDNLSRGNMGAIKVLQNLF 120

Query: 119 PEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLV 178
            EPGRLQFIYADLGD KAVN+ F+ENAFDAVMHFAAVAYVGESTL+PL+YYHNITSNTLV
Sbjct: 121 SEPGRLQFIYADLGDPKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLV 180

Query: 179 VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN- 237
           VLE+MA H V TLIYSSTCATYGEPEKMPITE TPQ PINPYGKAKKMAEDIILDFSK+ 
Sbjct: 181 VLEAMAAHNVRTLIYSSTCATYGEPEKMPITEGTPQFPINPYGKAKKMAEDIILDFSKSK 240

Query: 238 -SDMAVMILRLVVFFTLVA 255
            +DMAVMILR   +F ++ 
Sbjct: 241 KADMAVMILR---YFNVIG 256

Oryza sativa subsp. japonica (taxid: 39947)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|Q9FI17|ARAE4_ARATH Putative UDP-arabinose 4-epimerase 4 OS=Arabidopsis thaliana GN=At5g44480 PE=3 SV=1

 Score =  360 bits (923), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 195/279 (69%), Positives = 215/279 (77%), Gaps = 27/279 (9%)

Query: 1   MLNFGRARTQQRQTRPTSFGG------------------------LDYADPKRKSNFAGK 36
           MLN    RTQ+R  RP S GG                        +D  +PK K+N  GK
Sbjct: 1   MLNSSGVRTQRRSPRPLSLGGRKIITPTKFAYDHHNPDKVLDFVEMDCLEPKTKNNLTGK 60

Query: 37  FILAAALTALCIFLLKQSPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYR 96
            +L A+L  L I ++ QS +F+SPS FSQ EEGVTHVLVTGGAGYIGSHAALRLL+DSYR
Sbjct: 61  LLLVASLLILAIIVISQSSSFTSPSAFSQREEGVTHVLVTGGAGYIGSHAALRLLRDSYR 120

Query: 97  VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVA 156
           VTIVDNLSRGN+GAVK LQ+LFP+ GRLQFIYADLGD  AV K FSENAFDAVMHFAAVA
Sbjct: 121 VTIVDNLSRGNLGAVKTLQQLFPQTGRLQFIYADLGDPLAVEKIFSENAFDAVMHFAAVA 180

Query: 157 YVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP 216
           YVGESTL PLKYYHNITSNTL VLE+MARH V  LIYSSTCATYGEPEKMPITE+TPQ P
Sbjct: 181 YVGESTLYPLKYYHNITSNTLGVLEAMARHKVKKLIYSSTCATYGEPEKMPITEDTPQVP 240

Query: 217 INPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVA 255
           INPYGKAKKMAED+ILDFSKNSDMAVMILR   +F ++ 
Sbjct: 241 INPYGKAKKMAEDMILDFSKNSDMAVMILR---YFNVIG 276

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|Q9SN58|GALE2_ARATH UDP-glucose 4-epimerase 2 OS=Arabidopsis thaliana GN=At4g10960 PE=2 SV=3

 Score =  154 bits (388), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 79/177 (44%), Positives = 113/177 (63%), Gaps = 2/177 (1%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYAD 130
           +VLV+GGAGYIGSH  L+LL   Y V +VDNL   +  +++ +++L  E G RL F   D
Sbjct: 5   NVLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQVD 64

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           L D  A+ K FSE  FDAV+HFA +  VGES   PL YY+N    T+ +LE MA+HG   
Sbjct: 65  LRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCKN 124

Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILD-FSKNSDMAVMILR 246
           L++SS+   YG P+++P TEE P + +NPYG+ K   E+I  D +  + +  +++LR
Sbjct: 125 LVFSSSATVYGSPKEVPCTEEFPISALNPYGRTKLFIEEICRDVYGSDPEWKIILLR 181

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|Q9T0A7|GALE3_ARATH UDP-glucose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g23920 PE=2 SV=1

 Score =  152 bits (384), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 78/176 (44%), Positives = 112/176 (63%), Gaps = 2/176 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
           VLVTGGAGYIGSH  L+LL+  Y   +VDN    +  +++ +++L  E G RL F   DL
Sbjct: 5   VLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQVDL 64

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D  A+ K FSE  FDAV+HFA +  VGES   PL YY+N    T+ +LE MA++G   L
Sbjct: 65  RDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCKNL 124

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
           ++SS+   YG P+++P TEE+P +  NPYG+ K   E+I  D  + +S+  +++LR
Sbjct: 125 VFSSSATVYGWPKEVPCTEESPISATNPYGRTKLFIEEICRDVHRSDSEWKIILLR 180

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|P55180|GALE_BACSU UDP-glucose 4-epimerase OS=Bacillus subtilis (strain 168) GN=galE PE=3 SV=1

 Score =  152 bits (383), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 76/175 (43%), Positives = 112/175 (64%), Gaps = 3/175 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTGGAGYIGSH  + LL   Y + ++DNLS  +  A+  ++E+  +   L F  ADL 
Sbjct: 3   ILVTGGAGYIGSHTCVELLNSGYEIVVLDNLSNSSAEALNRVKEITGK--DLTFYEADLL 60

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D +AV+  F+EN  +AV+HFA +  VGES   PLKYYHN  + T ++ E+M ++GV  ++
Sbjct: 61  DREAVDSVFAENEIEAVIHFAGLKAVGESVAIPLKYYHNNLTGTFILCEAMEKYGVKKIV 120

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDF-SKNSDMAVMILR 246
           +SS+   YG PE  PITE+ P    NPYG+ K M E I+ D  + +++ +V +LR
Sbjct: 121 FSSSATVYGVPETSPITEDFPLGATNPYGQTKLMLEQILRDLHTADNEWSVALLR 175

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	267
255578061	417	UDP-glucose 4-epimerase, putative [Ricin	0.943	0.604	0.843	1e-124
297846004	418	hypothetical protein ARALYDRAFT_890616 [	0.943	0.602	0.831	1e-123
449435556	417	PREDICTED: UDP-arabinose 4-epimerase 1-l	0.943	0.604	0.835	1e-122
225444161	418	PREDICTED: UDP-arabinose 4-epimerase 1 [	0.943	0.602	0.823	1e-122
22329866	419	UDP-arabinose 4-epimerase [Arabidopsis t	0.943	0.601	0.823	1e-121
24417398	419	unknown [Arabidopsis thaliana]	0.943	0.601	0.819	1e-120
145324086	418	UDP-arabinose 4-epimerase [Arabidopsis t	0.940	0.600	0.823	1e-120
224117864	417	predicted protein [Populus trichocarpa]	0.943	0.604	0.823	1e-120
211906524	413	UDP-D-xylose 4-epimerase [Gossypium hirs	0.943	0.610	0.811	1e-119
449490631	412	PREDICTED: LOW QUALITY PROTEIN: UDP-arab	0.943	0.611	0.807	1e-118

>gi|255578061|ref|XP_002529901.1| UDP-glucose 4-epimerase, putative [Ricinus communis] gi|223530628|gb|EEF32504.1| UDP-glucose 4-epimerase, putative [Ricinus communis]

 Score =  449 bits (1154), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 215/255 (84%), Positives = 229/255 (89%), Gaps = 3/255 (1%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           MLNFGRAR QQR  R     GLDYADPKRKSN  GK ILAAALTALCI +LKQSPTF++P
Sbjct: 1   MLNFGRARNQQRTNRSMPLAGLDYADPKRKSNVVGKIILAAALTALCIIMLKQSPTFNTP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           SPFS HE+GV HVLVTGGAGYIGSHA+LRLLKD YRVTIVDNLSRGN+GAVKVLQELFPE
Sbjct: 61  SPFSLHEDGVVHVLVTGGAGYIGSHASLRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLG++K+VNK FSENAFDAVMHFAAVAYVGEST+DPLKYYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGNSKSVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           ESMA H V TLIYSSTCATYGEPEKMPITE+T Q PINPYGKAKKMAEDIILDFSKNSDM
Sbjct: 181 ESMAAHDVKTLIYSSTCATYGEPEKMPITEDTAQVPINPYGKAKKMAEDIILDFSKNSDM 240

Query: 241 AVMILRLVVFFTLVA 255
           AVMILR   +F ++ 
Sbjct: 241 AVMILR---YFNVIG 252

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297846004|ref|XP_002890883.1| hypothetical protein ARALYDRAFT_890616 [Arabidopsis lyrata subsp. lyrata] gi|297336725|gb|EFH67142.1| hypothetical protein ARALYDRAFT_890616 [Arabidopsis lyrata subsp. lyrata]

 Score =  446 bits (1147), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 212/255 (83%), Positives = 232/255 (90%), Gaps = 3/255 (1%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           M NFGRAR+Q RQ R  S GGLDYADPK+K+N+ GK +L A+LTALCIF+LKQSPTF++P
Sbjct: 1   MFNFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S FS+HE GVTHVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGN+GAVK+LQELFPE
Sbjct: 61  SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLGAVKILQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGDAKAVNK F+ENAFDAVMHFAAVAYVGEST  PLKYYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA HGV TLIYSSTCATYGEP+ MPITEETPQ PINPYGKAKKMAEDIILDFSKNS+M
Sbjct: 181 ETMAAHGVKTLIYSSTCATYGEPDTMPITEETPQVPINPYGKAKKMAEDIILDFSKNSNM 240

Query: 241 AVMILRLVVFFTLVA 255
           AVMILR   +F ++ 
Sbjct: 241 AVMILR---YFNVIG 252

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435556|ref|XP_004135561.1| PREDICTED: UDP-arabinose 4-epimerase 1-like [Cucumis sativus]

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 213/255 (83%), Positives = 230/255 (90%), Gaps = 3/255 (1%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           ML+FGR+R Q R  R  SFGG+DY DPKRK+NF GK ILAA+LTA+CI +LKQSP FS+P
Sbjct: 1   MLSFGRSRNQSRFGRSVSFGGMDYPDPKRKNNFVGKIILAASLTAICIVMLKQSPNFSTP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           +PF+ H+ GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN+GAVKVLQELFPE
Sbjct: 61  TPFASHQLGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKVLQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
            GRLQFIYADLGDAK+VNK FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTL VL
Sbjct: 121 YGRLQFIYADLGDAKSVNKIFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLTVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           ESMA HGV TLIYSSTCATYGEPEKMPITEET QAPINPYGKAKKMAE+IILDFSKNS M
Sbjct: 181 ESMAAHGVKTLIYSSTCATYGEPEKMPITEETSQAPINPYGKAKKMAEEIILDFSKNSKM 240

Query: 241 AVMILRLVVFFTLVA 255
           AVMILR   +F ++ 
Sbjct: 241 AVMILR---YFNVIG 252

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225444161|ref|XP_002270765.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Vitis vinifera] gi|297740899|emb|CBI31081.3| unnamed protein product [Vitis vinifera]

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 210/255 (82%), Positives = 231/255 (90%), Gaps = 3/255 (1%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           MLNF R+R Q R +R   FGG++YADPKRKSN  GK +LAA LTALCI +LKQS  F++P
Sbjct: 1   MLNFTRSRNQPRPSRSMPFGGMEYADPKRKSNVVGKILLAATLTALCILMLKQSSNFNTP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           SPFS+HE GVTHVLVTGGAGYIGSHAALRLLKDS+RVTIVDNLSRGN+GA+KVLQE FPE
Sbjct: 61  SPFSRHEPGVTHVLVTGGAGYIGSHAALRLLKDSHRVTIVDNLSRGNLGAIKVLQEQFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGDAKAVNK FSENAFDAVMHFAAVAYVGESTL+PL+YYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA HGV+TLIYSSTCATYGEPEKMPITE+TPQ PINPYGKAKKMAEDIILDFSKNS+M
Sbjct: 181 EAMAAHGVNTLIYSSTCATYGEPEKMPITEQTPQVPINPYGKAKKMAEDIILDFSKNSEM 240

Query: 241 AVMILRLVVFFTLVA 255
           AVMILR   +F ++ 
Sbjct: 241 AVMILR---YFNVIG 252

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22329866|ref|NP_174350.2| UDP-arabinose 4-epimerase [Arabidopsis thaliana] gi|79318985|ref|NP_001031118.1| UDP-arabinose 4-epimerase [Arabidopsis thaliana] gi|75313130|sp|Q9SA77.1|ARAE1_ARATH RecName: Full=UDP-arabinose 4-epimerase 1; AltName: Full=UDP-D-xylose 4-epimerase 1 gi|4587518|gb|AAD25749.1|AC007060_7 Strong similarity to F19I3.8 gi|3033381 putative UDP-galactose-4-epimerase from Arabidopsis thaliana BAC gb|AC004238 and is a member of PF|01370 the NAD dependent epimerase/dehydratase family. EST gb|AA597338 comes from this gene [Arabidopsis thaliana] gi|13272475|gb|AAK17176.1|AF325108_1 unknown protein [Arabidopsis thaliana] gi|18086329|gb|AAL57628.1| At1g30620/T5I8_7 [Arabidopsis thaliana] gi|27363222|gb|AAO11530.1| At1g30620/T5I8_7 [Arabidopsis thaliana] gi|28395529|gb|AAO39213.1| UDP-D-xylose 4-epimerase [Arabidopsis thaliana] gi|222423784|dbj|BAH19858.1| AT1G30620 [Arabidopsis thaliana] gi|332193130|gb|AEE31251.1| UDP-arabinose 4-epimerase [Arabidopsis thaliana] gi|332193131|gb|AEE31252.1| UDP-arabinose 4-epimerase [Arabidopsis thaliana]

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 210/255 (82%), Positives = 231/255 (90%), Gaps = 3/255 (1%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           M +FGRAR+Q RQ R  S GGLDYADPK+K+N+ GK +L A+LTALCIF+LKQSPTF++P
Sbjct: 1   MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S FS+HE GVTHVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGN+ AV++LQELFPE
Sbjct: 61  SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGDAKAVNK F+ENAFDAVMHFAAVAYVGEST  PLKYYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA HGV TLIYSSTCATYGEP+ MPITEETPQ PINPYGKAKKMAEDIILDFSKNSDM
Sbjct: 181 ETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDM 240

Query: 241 AVMILRLVVFFTLVA 255
           AVMILR   +F ++ 
Sbjct: 241 AVMILR---YFNVIG 252

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|24417398|gb|AAN60309.1| unknown [Arabidopsis thaliana]

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 209/255 (81%), Positives = 230/255 (90%), Gaps = 3/255 (1%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           M +FGRAR+Q RQ R  S GGLDYADPK+K+N+ GK +L A+LTALCIF+LKQSPTF++P
Sbjct: 1   MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S FS+HE GVTHVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGN+ AV++LQELFPE
Sbjct: 61  SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGDAKAVNK F+ENAFDAVMHFAA AYVGEST  PLKYYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAGAYVGESTQFPLKYYHNITSNTLVVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA HGV TLIYSSTCATYGEP+ MPITEETPQ PINPYGKAKKMAEDIILDFSKNSDM
Sbjct: 181 ETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDM 240

Query: 241 AVMILRLVVFFTLVA 255
           AVMILR   +F ++ 
Sbjct: 241 AVMILR---YFNVIG 252

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145324086|ref|NP_001077632.1| UDP-arabinose 4-epimerase [Arabidopsis thaliana] gi|332193132|gb|AEE31253.1| UDP-arabinose 4-epimerase [Arabidopsis thaliana]

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 210/255 (82%), Positives = 231/255 (90%), Gaps = 4/255 (1%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           M +FGRAR+Q RQ R  S GGLDYADPK+K+N+ GK +L A+LTALCIF+LKQSPTF++P
Sbjct: 1   MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S FS+HE GVTHVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGN+ AV++LQELFPE
Sbjct: 61  S-FSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPE 119

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGDAKAVNK F+ENAFDAVMHFAAVAYVGEST  PLKYYHNITSNTLVVL
Sbjct: 120 PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 179

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA HGV TLIYSSTCATYGEP+ MPITEETPQ PINPYGKAKKMAEDIILDFSKNSDM
Sbjct: 180 ETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDM 239

Query: 241 AVMILRLVVFFTLVA 255
           AVMILR   +F ++ 
Sbjct: 240 AVMILR---YFNVIG 251

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117864|ref|XP_002317687.1| predicted protein [Populus trichocarpa] gi|222860752|gb|EEE98299.1| predicted protein [Populus trichocarpa]

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 210/255 (82%), Positives = 224/255 (87%), Gaps = 3/255 (1%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           MLNFGR R Q R  R  S GG+DY+DPKRK+N  GK +LAA LTALCI +LKQSPTF SP
Sbjct: 1   MLNFGRTRAQTRSNRSISLGGMDYSDPKRKNNVVGKILLAATLTALCIIMLKQSPTFYSP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           SPFS HEEGV HVLVTGGAGYIGSHAALRLLKD YRVTIVDNLSRGNIGAVKVLQELFPE
Sbjct: 61  SPFSLHEEGVIHVLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNIGAVKVLQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGD K VN  FS+NAFDAVMHFAAVAYVGEST++PLKYYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGDPKTVNIIFSQNAFDAVMHFAAVAYVGESTMEPLKYYHNITSNTLVVL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA + V TLIYSSTCATYGEPEKMPITE TPQ PINPYGKAKKMAEDIILDFSKNSDM
Sbjct: 181 EAMAANDVKTLIYSSTCATYGEPEKMPITEVTPQVPINPYGKAKKMAEDIILDFSKNSDM 240

Query: 241 AVMILRLVVFFTLVA 255
           A+MILR   +F ++ 
Sbjct: 241 AIMILR---YFNVIG 252

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|211906524|gb|ACJ11755.1| UDP-D-xylose 4-epimerase [Gossypium hirsutum]

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 207/255 (81%), Positives = 226/255 (88%), Gaps = 3/255 (1%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           MLNF R R+Q R TR     G++Y DPKRKSNF GK ++AA LTALCI +LKQSP F++ 
Sbjct: 1   MLNFARGRSQPRSTRSMPLSGMEYPDPKRKSNFVGKILMAATLTALCIIMLKQSPNFNTR 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S FS+HEEGV HVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGN+GAVKVLQ+LFPE
Sbjct: 61  SRFSEHEEGVIHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNMGAVKVLQKLFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PG+LQF+YADLGD KAVNK FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLV+L
Sbjct: 121 PGQLQFVYADLGDLKAVNKIFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVIL 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           ESMA H V TLIYSSTCATYGEPEKMPITEETPQ PINPYGKAKKMAEDIILD+SKNSDM
Sbjct: 181 ESMAAHDVRTLIYSSTCATYGEPEKMPITEETPQVPINPYGKAKKMAEDIILDYSKNSDM 240

Query: 241 AVMILRLVVFFTLVA 255
           AVMILR   +F ++ 
Sbjct: 241 AVMILR---YFNVIG 252

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449490631|ref|XP_004158661.1| PREDICTED: LOW QUALITY PROTEIN: UDP-arabinose 4-epimerase 1-like [Cucumis sativus]

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 206/255 (80%), Positives = 222/255 (87%), Gaps = 3/255 (1%)

Query: 1   MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSP 60
           MLNFGR+RTQ R  R  S GG+DY+DPKRK N  GKFILAA LTALCI +LKQSP FS+P
Sbjct: 1   MLNFGRSRTQPRSNRSLSLGGMDYSDPKRKXNVVGKFILAATLTALCIIMLKQSPAFSAP 60

Query: 61  SPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
           S F   E GVTHVLVTGGAGYIGSHA LRLLKD+YRVTIVDNLSRGN+GAV+VLQELFPE
Sbjct: 61  SQFGVREPGVTHVLVTGGAGYIGSHATLRLLKDNYRVTIVDNLSRGNLGAVRVLQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLGD KAVNK FSENAFDAVMHFAAVAYVGEST+DPLKYYHNITSNTL ++
Sbjct: 121 PGRLQFIYADLGDPKAVNKIFSENAFDAVMHFAAVAYVGESTVDPLKYYHNITSNTLTLI 180

Query: 181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           E+MA H V  LIYSSTCATYGEP+KMPITEETPQ PINPYGKAKKMAEDII DFSKNS M
Sbjct: 181 EAMAAHRVKKLIYSSTCATYGEPDKMPITEETPQVPINPYGKAKKMAEDIIKDFSKNSKM 240

Query: 241 AVMILRLVVFFTLVA 255
           AVMILR   +F ++ 
Sbjct: 241 AVMILR---YFNVIG 252

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	267
TAIR|locus:2204639	419	MUR4 "MURUS 4" [Arabidopsis th	0.921	0.587	0.796	1.1e-101
TAIR|locus:2163401	436	DUR "DEFECTIVE UGE IN ROOT" [A	0.853	0.522	0.771	1.1e-89
TAIR|locus:2123466	351	UGE5 "UDP-D-glucose/UDP-D-gala	0.655	0.498	0.446	3.5e-36
TAIR|locus:2138121	350	UGE2 "UDP-D-glucose/UDP-D-gala	0.651	0.497	0.443	4e-35
TAIR|locus:2014235	348	RHD1 "ROOT HAIR DEFECTIVE 1" [	0.662	0.508	0.418	1.3e-34
TIGR_CMR|CJE_1273	328	CJE_1273 "UDP-glucose 4-epimer	0.636	0.518	0.434	9.5e-34
TIGR_CMR|BA_5700	338	BA_5700 "UDP-glucose 4-epimera	0.644	0.508	0.4	1.4e-32
TIGR_CMR|SO_1664	337	SO_1664 "UDP-glucose 4-epimera	0.655	0.519	0.404	2e-31
TAIR|locus:2010371	351	UGE1 "UDP-D-glucose/UDP-D-gala	0.655	0.498	0.387	4.2e-31
FB|FBgn0035147	350	Gale "UDP-galactose 4'-epimera	0.651	0.497	0.438	1.1e-30

TAIR|locus:2204639 MUR4 "MURUS 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 1008 (359.9 bits), Expect = 1.1e-101, P = 1.1e-101
 Identities = 196/246 (79%), Positives = 211/246 (85%)

Query:     1 MLNFGRAXXXXXXXXXXSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQXXXXXXX 60
             M +FGRA          S GGLDYADPK+K+N+ GK +L A+LTALCIF+LKQ       
Sbjct:     1 MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query:    61 XXXXQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE 120
                 +HE GVTHVLVTGGAGYIGSHAALRLLK+SYRVTIVDNLSRGN+ AV++LQELFPE
Sbjct:    61 SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPE 120

Query:   121 PGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL 180
             PGRLQFIYADLGDAKAVNK F+ENAFDAVMHFAAVAYVGEST  PLKYYHNITSNTLVVL
Sbjct:   121 PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 180

Query:   181 ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
             E+MA HGV TLIYSSTCATYGEP+ MPITEETPQ PINPYGKAKKMAEDIILDFSKNSDM
Sbjct:   181 ETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDM 240

Query:   241 AVMILR 246
             AVMILR
Sbjct:   241 AVMILR 246

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0019567 "arabinose biosynthetic process" evidence=IMP

GO:0050373 "UDP-arabinose 4-epimerase activity" evidence=IDA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0052542 "defense response by callose deposition" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=IMP

TAIR|locus:2163401 DUR "DEFECTIVE UGE IN ROOT" [Arabidopsis thaliana (taxid:3702)]

 Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
 Identities = 176/228 (77%), Positives = 190/228 (83%)

Query:    19 FGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQXXXXXXXXXXXQHEEGVTHVLVTGG 78
             F  +D  +PK K+N  GK +L A+L  L I ++ Q           Q EEGVTHVLVTGG
Sbjct:    43 FVEMDCLEPKTKNNLTGKLLLVASLLILAIIVISQSSSFTSPSAFSQREEGVTHVLVTGG 102

Query:    79 AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVN 138
             AGYIGSHAALRLL+DSYRVTIVDNLSRGN+GAVK LQ+LFP+ GRLQFIYADLGD  AV 
Sbjct:   103 AGYIGSHAALRLLRDSYRVTIVDNLSRGNLGAVKTLQQLFPQTGRLQFIYADLGDPLAVE 162

Query:   139 KFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA 198
             K FSENAFDAVMHFAAVAYVGESTL PLKYYHNITSNTL VLE+MARH V  LIYSSTCA
Sbjct:   163 KIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLEAMARHKVKKLIYSSTCA 222

Query:   199 TYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
             TYGEPEKMPITE+TPQ PINPYGKAKKMAED+ILDFSKNSDMAVMILR
Sbjct:   223 TYGEPEKMPITEDTPQVPINPYGKAKKMAEDMILDFSKNSDMAVMILR 270

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

TAIR|locus:2123466 UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
 Identities = 79/177 (44%), Positives = 113/177 (63%)

Query:    72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYAD 130
             +VLV+GGAGYIGSH  L+LL   Y V +VDNL   +  +++ +++L  E G RL F   D
Sbjct:     5 NVLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQVD 64

Query:   131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
             L D  A+ K FSE  FDAV+HFA +  VGES   PL YY+N    T+ +LE MA+HG   
Sbjct:    65 LRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCKN 124

Query:   191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILD-FSKNSDMAVMILR 246
             L++SS+   YG P+++P TEE P + +NPYG+ K   E+I  D +  + +  +++LR
Sbjct:   125 LVFSSSATVYGSPKEVPCTEEFPISALNPYGRTKLFIEEICRDVYGSDPEWKIILLR 181

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;IDA

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0016857 "racemase and epimerase activity, acting on carbohydrates and derivatives" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IPI

TAIR|locus:2138121 UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 78/176 (44%), Positives = 112/176 (63%)

Query:    73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
             VLVTGGAGYIGSH  L+LL+  Y   +VDN    +  +++ +++L  E G RL F   DL
Sbjct:     5 VLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQVDL 64

Query:   132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
              D  A+ K FSE  FDAV+HFA +  VGES   PL YY+N    T+ +LE MA++G   L
Sbjct:    65 RDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCKNL 124

Query:   192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN-SDMAVMILR 246
             ++SS+   YG P+++P TEE+P +  NPYG+ K   E+I  D  ++ S+  +++LR
Sbjct:   125 VFSSSATVYGWPKEVPCTEESPISATNPYGRTKLFIEEICRDVHRSDSEWKIILLR 180

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;IGI;IDA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0046983 "protein dimerization activity" evidence=IPI

GO:0042546 "cell wall biogenesis" evidence=IMP

TAIR|locus:2014235 RHD1 "ROOT HAIR DEFECTIVE 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 75/179 (41%), Positives = 113/179 (63%)

Query:    70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIY- 128
             V ++LVTGGAGYIGSH  L+LL   Y   ++DNL   ++ +++ +++L  + G+   ++ 
Sbjct:     2 VGNILVTGGAGYIGSHTVLQLLLGGYNTVVIDNLDNSSLVSIQRVKDLAGDHGQNLTVHQ 61

Query:   129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
              DL D  A+ K FSE  FDAVMHFA +  VGES   PL YY+N    T+ +LE MA HG 
Sbjct:    62 VDLRDKPALEKVFSETKFDAVMHFAGLKAVGESVAKPLLYYNNNLIATITLLEVMAAHGC 121

Query:   189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS-DMAVMILR 246
               L++SS+   YG P+++P TEE+P + ++PYG+ K   EDI  D  +   +  +++LR
Sbjct:   122 KKLVFSSSATVYGWPKEVPCTEESPLSGMSPYGRTKLFIEDICRDVQRGDPEWRIIMLR 180

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;IGI;IDA;TAS

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0010053 "root epidermal cell differentiation" evidence=IMP

GO:0009832 "plant-type cell wall biogenesis" evidence=TAS

GO:0009969 "xyloglucan biosynthetic process" evidence=IMP

GO:0010246 "rhamnogalacturonan I biosynthetic process" evidence=IMP

GO:0010306 "rhamnogalacturonan II biosynthetic process" evidence=IMP

GO:0005795 "Golgi stack" evidence=IDA

GO:0046983 "protein dimerization activity" evidence=IPI

GO:0042546 "cell wall biogenesis" evidence=IMP

TIGR_CMR|CJE_1273 CJE_1273 "UDP-glucose 4-epimerase" [Campylobacter jejuni RM1221 (taxid:195099)]

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 76/175 (43%), Positives = 112/175 (64%)

Query:    73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
             +L++GGAGYIGSH   + LK  + + ++DNLS+G+  A++ LQ++       +F   DL 
Sbjct:     3 ILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDLQKI----RAFKFFEQDLS 58

Query:   133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
             D + V   F    FDA++HFAA   V ES  +PLKYY N T NT  ++E+  + GV+  I
Sbjct:    59 DFQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTGVNKFI 118

Query:   193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
             +SST ATYGEP+   ++E +P APINPYG++K M+E+++ D S  N +    ILR
Sbjct:   119 FSSTAATYGEPQTPVVSETSPLAPINPYGRSKLMSEEVLRDASMANPEFKHCILR 173

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS

GO:0006012 "galactose metabolic process" evidence=ISS

TIGR_CMR|BA_5700 BA_5700 "UDP-glucose 4-epimerase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 70/175 (40%), Positives = 112/175 (64%)

Query:    73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
             +L+TGGAGYIGSH  + LL ++Y++ +VDNLS  +I ++  ++E+  +  + +F   ++ 
Sbjct:     3 ILITGGAGYIGSHTCVELLNNNYKIIVVDNLSNSSIESLNRVKEITGK--QFEFYKENVL 60

Query:   133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
             + + +N+ F EN  +AV+HFA    VGEST  PL YY+N   + +V+ + M +H V   I
Sbjct:    61 NREKMNEIFLENNIEAVIHFAGFKAVGESTTTPLAYYYNNIISAIVLCDVMQKHNVKNFI 120

Query:   193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSD-MAVMILR 246
             +SS+   YG P+ +PITEE P +  NPYG+ K M E I+ D +K  D  ++ +LR
Sbjct:   121 FSSSATVYGIPKTLPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADDEWSIALLR 175

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS

GO:0006012 "galactose metabolic process" evidence=ISS

TIGR_CMR|SO_1664 SO_1664 "UDP-glucose 4-epimerase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 72/178 (40%), Positives = 107/178 (60%)

Query:    73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
             +LVTGGAGYIG+H  + LL     V ++DNLS  +I A+  ++ +  +   + F   D+ 
Sbjct:     3 ILVTGGAGYIGTHTVVELLNAGSEVIVLDNLSNSSIEALDRVERITGKS--VTFYQGDIL 60

Query:   133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
             +   + K FS+++ DAV+HFA +  VGES   PLKYY N  + TL++ + MA   V  L+
Sbjct:    61 NKALLQKVFSDHSIDAVIHFAGLKAVGESVAKPLKYYENNVTGTLILCQVMAEFKVKNLV 120

Query:   193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVF 250
             +SS+   YG+P  +PITE+ P    NPYG++K M E I+ D   +SD +  I RL  F
Sbjct:   121 FSSSATVYGDPASLPITEDFPTGATNPYGQSKLMVEHILADLH-HSDPSWNIARLRYF 177

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS

GO:0005975 "carbohydrate metabolic process" evidence=ISS

TAIR|locus:2010371 UGE1 "UDP-D-glucose/UDP-D-galactose 4-epimerase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 69/178 (38%), Positives = 110/178 (61%)

Query:    72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF-PEPGR-LQFIYA 129
             ++LVTGGAG+IG+H  ++LLKD ++V+I+DN     I AV  ++EL  P+  + L F   
Sbjct:     8 NILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFNLG 67

Query:   130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
             DL +   + K FS+  FDAV+HFA +  VGES  +P +Y+ N    T+ + E+MA++   
Sbjct:    68 DLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYNCK 127

Query:   190 TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
              +++SS+   YG+PEK+P  E+     +NPYG+ K   E+I  D  K   +  +++LR
Sbjct:   128 MMVFSSSATVYGQPEKIPCMEDFELKAMNPYGRTKLFLEEIARDIQKAEPEWRIILLR 185

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;IGI;IDA

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0016857 "racemase and epimerase activity, acting on carbohydrates and derivatives" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA;TAS

GO:0046983 "protein dimerization activity" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0046369 "galactose biosynthetic process" evidence=IDA

FB|FBgn0035147 Gale "UDP-galactose 4'-epimerase" [Drosophila melanogaster (taxid:7227)]

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 79/180 (43%), Positives = 103/180 (57%)

Query:    73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQEL--FPE-PGR-LQFIY 128
             VLVTGGAGYIGSH  L +L   Y V  VDNL        K+ + L    E  G+ + F  
Sbjct:     6 VLVTGGAGYIGSHTVLEMLNAGYNVICVDNLCNAYSSGAKLPEALSRVQEITGKKVNFYR 65

Query:   129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
              D+ D + V   F E+  D V HFAA+  VGES   PL+YYHN  + T V+LE+MA + V
Sbjct:    66 VDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAMADNNV 125

Query:   189 DTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSKNSDM-AVMILR 246
                +YSS+   YGEP+ +P+TEE P     +PYGK K   E+I+ D  K+    AV+ LR
Sbjct:   126 FKFVYSSSATVYGEPKFLPVTEEHPTGNCTSPYGKTKYFTEEILKDLCKSDKRWAVVSLR 185

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS;IMP;NAS

GO:0006012 "galactose metabolic process" evidence=IMP;NAS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8H0B6	ARAE2_ORYSJ	5, ., 1, ., 3, ., 5	0.7863	0.8651	0.5907	yes	no
Q9SA77	ARAE1_ARATH	5, ., 1, ., 3, ., 5	0.8235	0.9438	0.6014	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	5.1.3	0.963

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	267
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	7e-88
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	5e-77
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	5e-73
PLN02240	352	PLN02240, PLN02240, UDP-glucose 4-epimerase	2e-60
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	4e-44
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	1e-38
PRK10675	338	PRK10675, PRK10675, UDP-galactose-4-epimerase; Pro	5e-38
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	2e-37
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	7e-35
cd08946	200	cd08946, SDR_e, extended (e) SDRs	8e-35
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	3e-28
cd05253	332	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera	4e-27
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	5e-25
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	7e-23
TIGR01181	317	TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd	1e-21
COG1088	340	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel	1e-20
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	1e-19
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	4e-19
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	4e-19
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	3e-18
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	2e-17
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	3e-17
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	3e-17
PLN02260	668	PLN02260, PLN02260, probable rhamnose biosynthetic	4e-17
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	8e-17
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	2e-16
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	3e-15
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	3e-14
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	2e-12
COG1089	345	COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve	3e-12
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	6e-12
PRK10084	352	PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase;	6e-12
TIGR02197	314	TIGR02197, heptose_epim, ADP-L-glycero-D-manno-hep	1e-11
PRK10217	355	PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase;	2e-11
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	2e-11
PLN02166	436	PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase	1e-10
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	4e-10
cd05255	382	cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synth	4e-10
cd05248	317	cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannohepto	7e-10
PLN02206	442	PLN02206, PLN02206, UDP-glucuronate decarboxylase	1e-09
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	1e-09
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	1e-09
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	1e-09
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	2e-09
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	2e-09
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	3e-09
COG1091	281	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C	3e-09
TIGR01214	287	TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase	4e-09
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	5e-09
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	1e-08
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	2e-08
PRK15181	348	PRK15181, PRK15181, Vi polysaccharide biosynthesis	5e-08
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	1e-07
TIGR01472	343	TIGR01472, gmd, GDP-mannose 4,6-dehydratase	2e-07
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	2e-07
cd05233	234	cd05233, SDR_c, classical (c) SDRs	4e-07
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-07
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	6e-07
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-07
pfam04321	284	pfam04321, RmlD_sub_bind, RmlD substrate binding d	9e-07
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	2e-06
PLN02653	340	PLN02653, PLN02653, GDP-mannose 4,6-dehydratase	3e-06
cd09812	339	cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid	5e-06
PLN02572	442	PLN02572, PLN02572, UDP-sulfoquinovose synthase	1e-05
cd05272	308	cd05272, TDH_SDR_e, L-threonine dehydrogenase, ext	2e-05
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	3e-05
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	3e-05
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	3e-05
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	5e-05
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	9e-05
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	1e-04
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	1e-04
PLN02695	370	PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase	1e-04
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	3e-04
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	3e-04
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	4e-04
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	4e-04
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	5e-04
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	6e-04
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	7e-04
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	7e-04
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	0.001
TIGR02622	349	TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra	0.001
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	0.001
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	0.001
TIGR03589	324	TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehyd	0.002
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	0.002
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	0.002
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	0.002
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	0.002
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	0.002
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	0.002
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	0.003
PRK11150	308	PRK11150, rfaD, ADP-L-glycero-D-mannoheptose-6-epi	0.003
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.003
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	0.003
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	0.003
COG1090	297	COG1090, COG1090, Predicted nucleoside-diphosphate	0.004
PLN02896	353	PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase	0.004

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score =  263 bits (675), Expect = 7e-88
 Identities = 84/175 (48%), Positives = 112/175 (64%), Gaps = 5/175 (2%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            VLVTGGAGYIGSH  + LL+  Y V ++DNLS G+  A+  ++++  E     F   D+
Sbjct: 1   KVLVTGGAGYIGSHTVVELLEAGYDVVVLDNLSNGHREALPRIEKIRIE-----FYEGDI 55

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D  A++K F+E+  DAV+HFAA+  VGES   PLKYY N    TL +LE+M  HGV   
Sbjct: 56  RDRAALDKVFAEHKIDAVIHFAALKAVGESVQKPLKYYDNNVVGTLNLLEAMRAHGVKNF 115

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           ++SS+ A YGEPE +PITEE P  P NPYG+ K M E I+ D +K   +  +ILR
Sbjct: 116 VFSSSAAVYGEPETVPITEEAPLNPTNPYGRTKLMVEQILRDLAKAPGLNYVILR 170

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score =  236 bits (604), Expect = 5e-77
 Identities = 85/174 (48%), Positives = 110/174 (63%), Gaps = 8/174 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGGAGYIGSH   +LLK  + V ++DNLS G+  A+  LQ         +F   DL 
Sbjct: 3   VLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ--------FKFYEGDLL 54

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D   +   F EN  DAV+HFAA   VGES  +PLKYY N    TL ++E+M + GV   I
Sbjct: 55  DRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFI 114

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           +SST A YGEP   PI+E +P APINPYG++K M+E+I+ D +K +   V+ILR
Sbjct: 115 FSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKANPFKVVILR 168

Length = 329

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score =  226 bits (577), Expect = 5e-73
 Identities = 80/175 (45%), Positives = 113/175 (64%), Gaps = 5/175 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTGGAGYIGSH   +LL+  + V I+DNLS G+  A+   + + P      F+  DL 
Sbjct: 2   ILVTGGAGYIGSHTVRQLLESGHEVVILDNLSNGSREALPRGERITPVT----FVEGDLR 57

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D + +++ F E+  DAV+HFA +  VGES   PLKYY N    TL +LE+M + GV   I
Sbjct: 58  DRELLDRLFEEHKIDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQAGVKKFI 117

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
           +SS+ A YGEP  +PI+E++P  PINPYG++K M+E I+ D  K + D + +ILR
Sbjct: 118 FSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSEQILRDLQKADPDWSYVILR 172

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase

 Score =  194 bits (496), Expect = 2e-60
 Identities = 77/176 (43%), Positives = 110/176 (62%), Gaps = 2/176 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
           +LVTGGAGYIGSH  L+LL   Y+V ++DNL   +  A++ ++EL  + G  L F   DL
Sbjct: 8   ILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDL 67

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D +A+ K F+   FDAV+HFA +  VGES   PL YY N    T+ +LE MA+HG   L
Sbjct: 68  RDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKL 127

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
           ++SS+   YG+PE++P TEE P +  NPYG+ K   E+I  D    + +  +++LR
Sbjct: 128 VFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRDIHASDPEWKIILLR 183

Length = 352

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score =  148 bits (376), Expect = 4e-44
 Identities = 63/175 (36%), Positives = 93/175 (53%), Gaps = 10/175 (5%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTGG G+IGSH   RLL++ Y V     L R         +      GR++F   DL 
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVI---VLGRRR-------RSESLNTGRIRFHEGDLT 50

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D  A+ +  +E   DAV+H AA + VG S  DP  +       TL +LE+  R GV   +
Sbjct: 51  DPDALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKRFV 110

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRL 247
           ++S+   YG+    PITE+TP  P++PY  AK  AE ++  +++   +  +ILRL
Sbjct: 111 FASSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILRL 165

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score =  136 bits (346), Expect = 1e-38
 Identities = 63/177 (35%), Positives = 92/177 (51%), Gaps = 10/177 (5%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYAD 130
            VLVTGGAG+IGSH   RLL+  + V ++DNLS G        +E  PE    ++FI  D
Sbjct: 1   RVLVTGGAGFIGSHLVERLLERGHEVIVLDNLSTGK-------KENLPEVKPNVKFIEGD 53

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D + V   F     D V H AA A V  S  DP+K +      TL +LE+  + GV  
Sbjct: 54  IRDDELVEFAFEG--VDYVFHQAAQASVPRSIEDPIKDHEVNVLGTLNLLEAARKAGVKR 111

Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRL 247
            +Y+S+ + YG+P  +P  E+ P  P++PY  +K   E     F++   +  + LR 
Sbjct: 112 FVYASSSSVYGDPPYLPKDEDHPPNPLSPYAVSKYAGELYCQVFARLYGLPTVSLRY 168

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|182639 PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional

 Score =  136 bits (343), Expect = 5e-38
 Identities = 66/176 (37%), Positives = 101/176 (57%), Gaps = 4/176 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V  LI
Sbjct: 61  NEALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLI 120

Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
           +SS+   YG+  K+P  E  P   P +PYGK+K M E I+ D  K   D ++ +LR
Sbjct: 121 FSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLR 176

Length = 338

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  133 bits (336), Expect = 2e-37
 Identities = 60/183 (32%), Positives = 94/183 (51%), Gaps = 14/183 (7%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +LVTGGAG+IGSH   RLL   + V  +D L  G            P    ++F+  DL
Sbjct: 2   RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLD----------PLLSGVEFVVLDL 51

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTL-DPLKYYHNITSNTLVVLESMARHGVDT 190
            D   V++       DAV+H AA + V +S   DP ++       TL +LE+    GV  
Sbjct: 52  TDRDLVDELAKG-VPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKR 110

Query: 191 LIYSSTCAT-YGEPEKMPITEE-TPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLV 248
            +++S+ +  YG+P  +PI E+  P  P+NPYG +K  AE ++  +++   + V+ILR  
Sbjct: 111 FVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPF 170

Query: 249 VFF 251
             +
Sbjct: 171 NVY 173

Length = 314

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score =  126 bits (319), Expect = 7e-35
 Identities = 58/177 (32%), Positives = 84/177 (47%), Gaps = 7/177 (3%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +LVTGGAG+IGSH   RLL++   V +VDNLS G    ++   E        +F+  DL
Sbjct: 1   RILVTGGAGFIGSHLVDRLLEEGNEVVVVDNLSSGRRENIEPEFENK----AFRFVKRDL 56

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D        ++   D V H AA   V     DP          T  VLE+M  +GV  +
Sbjct: 57  LDTADK---VAKKDGDTVFHLAANPDVRLGATDPDIDLEENVLATYNVLEAMRANGVKRI 113

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLV 248
           +++S+   YGE + +P  E+ P  PI+ YG +K  AE +I  ++        I R  
Sbjct: 114 VFASSSTVYGEAKVIPTPEDYPPLPISVYGASKLAAEALISAYAHLFGFQAWIFRFA 170

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score =  123 bits (312), Expect = 8e-35
 Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 45/176 (25%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTGGAG+IGSH   RLL+  + V ++D                               
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGHEVVVIDR------------------------------ 30

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDTL 191
                         D V+H AA+  V  S  +P + +  N+   TL +LE+  + GV   
Sbjct: 31  -------------LDVVVHLAALVGVPASWDNPDEDFETNVVG-TLNLLEAARKAGVKRF 76

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRL 247
           +Y+S+ + YG PE +P  EETP  P++PYG +K  AE ++  + ++  + V+ILRL
Sbjct: 77  VYASSASVYGSPEGLPEEEETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILRL 132

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score =  109 bits (275), Expect = 3e-28
 Identities = 60/182 (32%), Positives = 101/182 (55%), Gaps = 12/182 (6%)

Query: 71  THVLVTGGAGYIGSHAALRLLK--DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIY 128
             +LVTGGAG+IGS+    LL     Y++  +D L+    G ++ L+++   P R +F+ 
Sbjct: 1   MKILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYA--GNLENLEDVSSSP-RYRFVK 57

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMAR 185
            D+ DA+ V++ F E   DAV+HFAA ++V  S  DP  +   I +N   T  +LE+  +
Sbjct: 58  GDICDAELVDRLFEEEKIDAVIHFAAESHVDRSISDPEPF---IRTNVLGTYTLLEAARK 114

Query: 186 HGVDTLIYSSTCATYGE-PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMI 244
           +GV   ++ ST   YG+  +    TE +P AP +PY  +K  A+ ++  + +   + V+I
Sbjct: 115 YGVKRFVHISTDEVYGDLLDDGEFTETSPLAPTSPYSASKAAADLLVRAYHRTYGLPVVI 174

Query: 245 LR 246
            R
Sbjct: 175 TR 176

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs

 Score =  106 bits (267), Expect = 4e-27
 Identities = 65/184 (35%), Positives = 96/184 (52%), Gaps = 9/184 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQ---ELFPEPGRLQFIYA 129
           +LVTG AG+IG H A RLL+    V  +DNL+  +   V++ +   EL  + G  +F+  
Sbjct: 3   ILVTGAAGFIGFHVAKRLLERGDEVVGIDNLN--DYYDVRLKEARLELLGKSGGFKFVKG 60

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
           DL D +A+ + F ++ FDAV+H AA A V  S  +P  Y  +     L +LE     GV 
Sbjct: 61  DLEDREALRRLFKDHEFDAVIHLAAQAGVRYSLENPHAYVDSNIVGFLNLLELCRHFGVK 120

Query: 190 TLIYSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSKNSDMAVMILRLV 248
            L+Y+S+ + YG   KMP +E+     PI+ Y   KK  E +   +S    +    LR  
Sbjct: 121 HLVYASSSSVYGLNTKMPFSEDDRVDHPISLYAATKKANELMAHTYSHLYGIPTTGLR-- 178

Query: 249 VFFT 252
            FFT
Sbjct: 179 -FFT 181

This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score =  100 bits (252), Expect = 5e-25
 Identities = 54/179 (30%), Positives = 82/179 (45%), Gaps = 10/179 (5%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           +VLVTG  G+IGSH   RLL++ + V  +D  +  N               R  FI  D+
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGHEVRALDIYNSFN----SWGLLDNAVHDRFHFISGDV 56

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            DA  V     +   D V H AA+  +  S   PL Y       TL VLE+        +
Sbjct: 57  RDASEVEYLVKKC--DVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVLYRKRV 114

Query: 192 IYSSTCATYGEPEKMPITEETPQAPIN----PYGKAKKMAEDIILDFSKNSDMAVMILR 246
           +++ST   YG  + +PI E+ P   IN    PY  +K+ A+ +   + ++  + V I+R
Sbjct: 115 VHTSTSEVYGTAQDVPIDEDHPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVTIIR 173

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score = 95.0 bits (237), Expect = 7e-23
 Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 5/177 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            L+TG  G  GS+ A  LL+  Y V  IV   S  N      +  L+    R+   Y DL
Sbjct: 2   ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTD---RIDHLYINKDRITLHYGDL 58

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D+ ++ +   +   D + H AA ++V  S  DP          TL +LE++   G+D  
Sbjct: 59  TDSSSLRRAIEKVRPDEIYHLAAQSHVKVSFDDPEYTAEVNAVGTLNLLEAIRILGLDAR 118

Query: 192 IY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRL 247
            Y +S+   YG+ +++P +E TP  P +PY  +K  A+ I  ++ +   +  +  RL
Sbjct: 119 FYQASSSEEYGKVQELPQSETTPFRPRSPYAVSKLYADWITRNYREAYGLFAVNGRL 175

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase

 Score = 91.7 bits (228), Expect = 1e-21
 Identities = 57/179 (31%), Positives = 95/179 (53%), Gaps = 9/179 (5%)

Query: 73  VLVTGGAGYIGS---HAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
           +LVTGGAG+IGS      L    D   V ++D L+    G ++ L +L   P R +F+  
Sbjct: 2   ILVTGGAGFIGSNFVRYILNEHPD-AEVIVLDKLTYA--GNLENLADLEDNP-RYRFVKG 57

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
           D+GD + V++ F+E+  DAV+HFAA ++V  S   P  +       T  +LE++ ++  +
Sbjct: 58  DIGDRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHE 117

Query: 190 T-LIYSSTCATYGEPEK-MPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
               + ST   YG+ EK    TE TP AP +PY  +K  ++ ++  + +   +  +I R
Sbjct: 118 FRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHRTYGLPALITR 176

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317

>gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 89.2 bits (222), Expect = 1e-20
 Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 17/168 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLK--DSYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYA 129
           +LVTGGAG+IGS+    +L       V  +D L+  GN+  +  +++      R +F+  
Sbjct: 3   ILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDS----PRYRFVQG 58

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARH 186
           D+ D + V++ F E   DAV+HFAA ++V  S   P  +   I +N   T  +LE+  ++
Sbjct: 59  DICDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPF---IQTNVVGTYTLLEAARKY 115

Query: 187 GVDT-LIYSSTCATYGEPEK--MPITEETPQAPINPYGKAKKMAEDII 231
                  + ST   YG+        TE TP  P +PY  A K A D++
Sbjct: 116 WGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYS-ASKAASDLL 162

Length = 340

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 85.8 bits (213), Expect = 1e-19
 Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 15/177 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+ GG G+IGSH    LL++  +V +     R       +     P  G + +I  D  
Sbjct: 2   VLIVGGNGFIGSHLVDALLEEGPQVRV---FDR------SIPPYELPLGG-VDYIKGDYE 51

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDP-LKYYHNITSNTLVVLESMARHGVDTL 191
           +   +         D V+H A+      S  +P L    N+   T+ +LE+ A  G+  +
Sbjct: 52  NRADLESALVG--IDTVIHLASTTNPATSNKNPILDIQTNVAP-TVQLLEACAAAGIGKI 108

Query: 192 IYSSTCAT-YGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRL 247
           I++S+  T YG PE++PI+E  P  PI+ YG +K   E  +  +     +   +LR+
Sbjct: 109 IFASSGGTVYGVPEQLPISESDPTLPISSYGISKLAIEKYLRLYQYLYGLDYTVLRI 165

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 84.7 bits (210), Expect = 4e-19
 Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 17/168 (10%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIY 128
            VL+TG +G++G   A RLL D    R+ ++D           V+    P    R+  I 
Sbjct: 2   KVLITGASGFVGQRLAERLLSDVPNERLILID-----------VVSPKAPSGAPRVTQIA 50

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            DL     +    +    D V H AA+   G +  D    Y      T  +LE++ ++G 
Sbjct: 51  GDLAVPALIEALANGRP-DVVFHLAAI-VSGGAEADFDLGYRVNVDGTRNLLEALRKNGP 108

Query: 189 DT-LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFS 235
               +++S+ A YG P   P+T+ T   P + YG  K M E ++ D+S
Sbjct: 109 KPRFVFTSSLAVYGLPLPNPVTDHTALDPASSYGAQKAMCELLLNDYS 156

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 84.3 bits (209), Expect = 4e-19
 Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 20/178 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTG  G+IG     +LL     V I          AV+  +   P         A+L 
Sbjct: 2   VLVTGANGFIGRALVDKLLSRGEEVRI----------AVRNAENAEPSVVL-----AELP 46

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYV-GESTLDPLKYYHNI-TSNTLVVLESMARHGVDT 190
           D  +    F     DAV+H AA  +V  +   DPL  Y  + T  T  +  + AR GV  
Sbjct: 47  DIDSFTDLFLG--VDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKR 104

Query: 191 LIYSSTCATYGEP-EKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRL 247
            ++ S+    GE     P  E  P AP + YG++K  AE  +L+   +  M V+ILR 
Sbjct: 105 FVFLSSVKVNGEGTVGAPFDETDPPAPQDAYGRSKLEAERALLELGASDGMEVVILRP 162

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 82.3 bits (204), Expect = 3e-18
 Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 38/203 (18%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR----GNIGAVKVLQELFPEPGRLQFIY 128
           VL+TGGAG+IGS+ A   LK  + V   DNL R    GN+  +K  +E     G ++F++
Sbjct: 3   VLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFGNLAWLKANRED----GGVRFVH 58

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMAR 185
            D+ +   +   F +   D ++H AA   V  S   P     +  +N   TL VLE+  +
Sbjct: 59  GDIRNRNDLEDLFED--IDLIIHTAAQPSVTTSASSP---RLDFETNALGTLNVLEAARQ 113

Query: 186 HGVDT-LIYSSTCATYG-EPEKMP-------------------ITEETP-QAPINPYGKA 223
           H  +   I++ST   YG  P  +P                   I+E  P     + YG +
Sbjct: 114 HAPNAPFIFTSTNKVYGDLPNYLPLEELETRYELAPEGWSPAGISESFPLDFSHSLYGAS 173

Query: 224 KKMAEDIILDFSKNSDMAVMILR 246
           K  A+  + ++ +   +  ++ R
Sbjct: 174 KGAADQYVQEYGRIFGLKTVVFR 196

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score = 79.6 bits (197), Expect = 2e-17
 Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 22/199 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGGAG++GSH   RLL+D + V  VDN   G     + ++ L   P   +FI  D+ 
Sbjct: 3   ILITGGAGFLGSHLCDRLLEDGHEVICVDNFFTGRK---RNIEHLIGHP-NFEFIRHDVT 58

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +             D + H A  A       +P+K        TL +L    R G   ++
Sbjct: 59  E-------PLYLEVDQIYHLACPASPVHYQYNPIKTLKTNVLGTLNMLGLAKRVGA-RVL 110

Query: 193 YSSTCATYGEPEKMPITEE-----TPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRL 247
            +ST   YG+PE  P  E       P  P + Y + K++AE + + + +   + V I R 
Sbjct: 111 LASTSEVYGDPEVHPQPESYWGNVNPIGPRSCYDEGKRVAETLCMAYHRQHGVDVRIAR- 169

Query: 248 VVFFTLVAFVIKINPTDRR 266
            +F T   +  +++P D R
Sbjct: 170 -IFNT---YGPRMHPNDGR 184

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 78.9 bits (195), Expect = 3e-17
 Identities = 56/177 (31%), Positives = 89/177 (50%), Gaps = 9/177 (5%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPE-PGRLQFIYAD 130
           VLVTG  G+IGSH    L++  Y V   V   S  + G    L    PE   +++ +  D
Sbjct: 1   VLVTGADGFIGSHLVEALVRQGYEVRAFVLYNSFNSWGW---LDTSPPEVKDKIEVVTGD 57

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVD 189
           + D  +V K  +    D V H AA+  +  S + P  Y   N+T  TL VL++    GV+
Sbjct: 58  IRDPDSVRK--AMKGCDVVFHLAALIAIPYSYIAPDSYVDTNVTG-TLNVLQAARDLGVE 114

Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
            ++++ST   YG  + +PI E+ P    +PY  +K  A+ + L F ++ +  V I+R
Sbjct: 115 KVVHTSTSEVYGTAQYVPIDEKHPLQGQSPYSASKIGADQLALSFYRSFNTPVTIIR 171

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 79.3 bits (196), Expect = 3e-17
 Identities = 49/181 (27%), Positives = 75/181 (41%), Gaps = 16/181 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG  G++GS+    LL   YRV     L R    +      L   P  ++ +  DL 
Sbjct: 1   ILVTGATGFLGSNLVRALLAQGYRVRA---LVR----SGSDAVLLDGLP--VEVVEGDLT 51

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           DA ++         D V H AA         D  + Y      T  VL++    GV  ++
Sbjct: 52  DAASLAAAMKG--CDRVFHLAAFTS--LWAKDRKELYRTNVEGTRNVLDAALEAGVRRVV 107

Query: 193 YSSTCATYGEPEKMPITEETPQAPI---NPYGKAKKMAEDIILDFSKNSDMAVMILRLVV 249
           ++S+ A  G P    I E TP       N Y ++K +AE  +L+ +      V++    V
Sbjct: 108 HTSSIAALGGPPDGRIDETTPWNERPFPNDYYRSKLLAELEVLEAAAEGLDVVIVNPSAV 167

Query: 250 F 250
           F
Sbjct: 168 F 168

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|215146 PLN02260, PLN02260, probable rhamnose biosynthetic enzyme

 Score = 80.2 bits (198), Expect = 4e-17
 Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 13/182 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPG--RLQFIY 128
           +L+TG AG+I SH A RL+++   Y++ ++D L          L+ L P       +F+ 
Sbjct: 9   ILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDY-----CSNLKNLNPSKSSPNFKFVK 63

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG- 187
            D+  A  VN        D +MHFAA  +V  S  +  ++  N    T V+LE+    G 
Sbjct: 64  GDIASADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123

Query: 188 VDTLIYSSTCATYGEPEKMPIT---EETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMI 244
           +   I+ ST   YGE ++       E +   P NPY   K  AE +++ + ++  + V+ 
Sbjct: 124 IRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183

Query: 245 LR 246
            R
Sbjct: 184 TR 185

Length = 668

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 78.3 bits (193), Expect = 8e-17
 Identities = 56/180 (31%), Positives = 85/180 (47%), Gaps = 22/180 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+TGGAG IGSH    LL+  ++V ++DN + G        +E  P+   L  +   + 
Sbjct: 3   VLITGGAGQIGSHLIEHLLERGHQVVVIDNFATGR-------REHLPDHPNLTVVEGSIA 55

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARHGVD 189
           D   V+K F +   DAV+H  A AY      DP  +Y +  +N      V+++  + GV 
Sbjct: 56  DKALVDKLFGDFKPDAVVH-TAAAYK-----DPDDWYEDTLTNVVGGANVVQAAKKAGVK 109

Query: 190 TLIYSSTCATYG-EPEKMPITEETPQAPIN-PYGKAKKMAEDIILDFSKNSDMAVMILRL 247
            LIY  T   YG +P + PI  + P+AP    Y  +K   E  +      S +  +  RL
Sbjct: 110 RLIYFQTALCYGLKPMQQPIRLDHPRAPPGSSYAISKTAGEYYLE----LSGVDFVTFRL 165

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 76.9 bits (190), Expect = 2e-16
 Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 51/203 (25%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPE---PGRLQFIY 128
           VLVTG  G+I SH   +LLK  Y+V   V +LS+        L+ L        RL+F+ 
Sbjct: 2   VLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSK-----SAKLKALLKAAGYNDRLEFVI 56

Query: 129 ADLGDAKAVNKFFSENAFD-------AVMHFA-AVAYVG----ESTLDPLKYYHNITSNT 176
            D           + NA+D        V+H A    + G    +  +DP       T N 
Sbjct: 57  VDD--------LTAPNAWDEALKGVDYVIHVASPFPFTGPDAEDDVIDPAV---EGTLN- 104

Query: 177 LVVLESMARHG-VDTLIYSSTCA----TYGEPEKMPITEE-------TPQAPINPYGKAK 224
             VLE+    G V  ++ +S+ A       E      TEE       +    ++ Y  +K
Sbjct: 105 --VLEAAKAAGSVKRVVLTSSVAAVGDPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASK 162

Query: 225 KMAEDIILDFSKNS----DMAVM 243
            +AE    +F K +    ++  +
Sbjct: 163 TLAEKAAWEFVKENKPKFELITI 185

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 73.4 bits (181), Expect = 3e-15
 Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQEL---FPEPGRLQFIYA 129
           +LVTGGAG IGS    ++LK   +  IV    R      ++++EL   FP   +L+FI  
Sbjct: 5   ILVTGGAGSIGSELVRQILKFGPKKLIV--FDRDENKLHELVRELRSRFPHD-KLRFIIG 61

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
           D+ D + + + F E   D V H AA+ +V     +P +        T  V+++   +GV+
Sbjct: 62  DVRDKERLRRAFKERGPDIVFHAAALKHVPSMEDNPEEAIKTNVLGTKNVIDAAIENGVE 121

Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN-SDMAVMILR 246
             +  ST              +    P+N  G  K++AE ++L  ++  S      +R
Sbjct: 122 KFVCIST--------------DKAVNPVNVMGATKRVAEKLLLAKNEYSSSTKFSTVR 165

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 71.0 bits (174), Expect = 3e-14
 Identities = 46/189 (24%), Positives = 78/189 (41%), Gaps = 31/189 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG  G+IGSH A RL  + + V   D  S  ++       E         F   DL 
Sbjct: 3   ALVTGAGGFIGSHLAERLKAEGHYVRGADWKSPEHMTQPTDDDE---------FHLVDLR 53

Query: 133 DAKAVNKFFSENAFDAVMHFAA----VAYVGESTLDPLKYYHNITSNTLV---VLESMAR 185
           + +   K       D V H AA    + Y+  +      +   + +NTL+   +LE+   
Sbjct: 54  EMENCLKATEG--VDHVFHLAADMGGMGYIQSN------HAVIMYNNTLINFNMLEAARI 105

Query: 186 HGVDTLIYSSTCATYG-----EPEKMPITEE--TPQAPINPYGKAKKMAEDIILDFSKNS 238
           +GV+  +++S+   Y      E   + + EE   P  P + YG  K   E +   ++++ 
Sbjct: 106 NGVERFLFASSACVYPEFKQLETTVVRLREEDAWPAEPQDAYGWEKLATERLCQHYNEDY 165

Query: 239 DMAVMILRL 247
            +   I+R 
Sbjct: 166 GIETRIVRF 174

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 65.5 bits (160), Expect = 2e-12
 Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 19/182 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG AG +G     R L  S RV  VD L R               P +++++  D+ 
Sbjct: 1   ILVTGAAGGLG-RLLARRLAASPRVIGVDGLDRRRPP---------GSPPKVEYVRLDIR 50

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D  A +  F E   DAV+H A +  +        ++  N+   T  VL++ A  GV  ++
Sbjct: 51  DPAAADV-FREREADAVVHLAFI--LDPPRDGAERHRINVDG-TQNVLDACAAAGVPRVV 106

Query: 193 YSSTCATYG--EPEKMPITEETP--QAPINPYGKAKKMAEDIILDFSK-NSDMAVMILRL 247
            +S+ A YG       P+TE+ P   +P   Y + K   E ++ +F + + ++ V +LR 
Sbjct: 107 VTSSVAVYGAHPDNPAPLTEDAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELNVTVLRP 166

Query: 248 VV 249
             
Sbjct: 167 AT 168

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 65.5 bits (160), Expect = 3e-12
 Identities = 48/155 (30%), Positives = 69/155 (44%), Gaps = 5/155 (3%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           L+TG  G  GS+ A  LL+  Y V  I    S  N   + + ++      RL   Y DL 
Sbjct: 6   LITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLT 65

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH--GVDT 190
           D+  + +   E   D + + AA ++VG S   P          TL +LE++ R      T
Sbjct: 66  DSSNLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAI-RILGEKKT 124

Query: 191 LIYS-STCATYGEPEKMPITEETPQAPINPYGKAK 224
             Y  ST   YG  +++P  E TP  P +PY  AK
Sbjct: 125 RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK 159

Length = 345

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 64.3 bits (157), Expect = 6e-12
 Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 21/179 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           VLVTG  G++GS     LL+     RV +     R N+  + V           + +  D
Sbjct: 3   VLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDV-----------EIVEGD 51

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           L D  ++ K  +     A+ H AA   +     DP + Y      T  +L +    GV+ 
Sbjct: 52  LRDPASLRKAVA--GCRALFHVAADYRLW--APDPEEMYAANVEGTRNLLRAALEAGVER 107

Query: 191 LIYSSTCATYGEPEKMPITEETPQAP----INPYGKAKKMAEDIILDFSKNSDMAVMIL 245
           ++Y+S+ AT G        +ET  +     I  Y ++K +AE   L+ +    + V+I+
Sbjct: 108 VVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKGLPVVIV 166

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|236649 PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; Provisional

 Score = 64.4 bits (157), Expect = 6e-12
 Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 27/174 (15%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYAD 130
           +LVTGGAG+IGS     ++ ++   V  VD L+  GN+ ++  + +      R  F +AD
Sbjct: 3   ILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSD----SERYVFEHAD 58

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D   +++ F+++  DAVMH AA ++V  S   P  +       T V+LE+ AR+    
Sbjct: 59  ICDRAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEA-ARNYWSA 117

Query: 191 LI----------YSSTCATYGE---------PEKMPI-TEETPQAPINPYGKAK 224
           L           + ST   YG+          E++P+ TE T  AP +PY  +K
Sbjct: 118 LDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTAYAPSSPYSASK 171

Length = 352

>gnl|CDD|233775 TIGR02197, heptose_epim, ADP-L-glycero-D-manno-heptose-6-epimerase

 Score = 63.1 bits (154), Expect = 1e-11
 Identities = 43/189 (22%), Positives = 74/189 (39%), Gaps = 31/189 (16%)

Query: 73  VLVTGGAGYIGSHAALRL----LKDSYRVTIVDNLSRG--NIGAVKVLQELFPEPGRLQF 126
           ++VTGGAG+IGS+    L    + D   + +VDNL  G   +                  
Sbjct: 1   IIVTGGAGFIGSNLVKALNERGITD---ILVVDNLRDGHKFLNLAD------------LV 45

Query: 127 IYADLGDAKAVNKFFSENA--FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMA 184
           I   +     +++         +A+ H  A +   E   D      N    +  +L+  A
Sbjct: 46  IADYIDKEDFLDRLEKGAFGKIEAIFHQGACSDTTE--TDGEYMMENNYQYSKRLLDWCA 103

Query: 185 RHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILD--FSKNSDMAV 242
             G+   IY+S+ ATYG+ E         + P+N YG +K + +  +      +     V
Sbjct: 104 EKGI-PFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPEALSAQV 162

Query: 243 MILRLVVFF 251
           + LR   +F
Sbjct: 163 VGLR---YF 168

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 314

>gnl|CDD|182313 PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase; Provisional

 Score = 63.1 bits (153), Expect = 2e-11
 Identities = 52/175 (29%), Positives = 81/175 (46%), Gaps = 23/175 (13%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS-RGNIGAVKVLQELFP--EPGRLQFIY 128
           +L+TGGAG+IGS     ++ ++   V +VD L+  GN      L  L P  +  R  F  
Sbjct: 4   ILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGN------LMSLAPVAQSERFAFEK 57

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+ D   + + F+E+  D VMH AA ++V  S   P  +       T  +LE+ AR   
Sbjct: 58  VDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA-ARAYW 116

Query: 189 DTLI----------YSSTCATYGEPEKMP--ITEETPQAPINPYGKAKKMAEDII 231
           + L           + ST   YG+        TE TP AP +PY  +K  ++ ++
Sbjct: 117 NALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171

Length = 355

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 60.5 bits (147), Expect = 2e-11
 Identities = 43/186 (23%), Positives = 72/186 (38%), Gaps = 32/186 (17%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+ G  G+IG   A  LL+  + VT++   ++        L +   EP  +     DL 
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVRNTKR-------LSKEDQEPVAVVEG--DLR 51

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARHGVD 189
           D  +++        D V+H A                     +   T  VLE+    GV 
Sbjct: 52  DLDSLSDAVQGV--DVVIHLAGAPRDTR---------DFCEVDVEGTRNVLEAAKEAGVK 100

Query: 190 TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVV 249
             I+ S+   YG+       EET  +P +PY   K   E ++ + S    +   I+R  V
Sbjct: 101 HFIFISSLGAYGDL-----HEETEPSPSSPYLAVKAKTEAVLREAS----LPYTIVRPGV 151

Query: 250 FFTLVA 255
            +  +A
Sbjct: 152 IYGDLA 157

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|165812 PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase

 Score = 61.2 bits (148), Expect = 1e-10
 Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 19/181 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           ++VTGGAG++GSH   +L+     V ++DN   G     + L  LF  P R + I  D+ 
Sbjct: 123 IVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGR---KENLVHLFGNP-RFELIRHDV- 177

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
               V     E   D + H A  A       +P+K        TL +L    R G   L+
Sbjct: 178 ----VEPILLE--VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLL 231

Query: 193 YSSTCATYGEPEKMPITEETPQAPINP------YGKAKKMAEDIILDFSKNSDMAVMILR 246
            +ST   YG+P + P  +ET    +NP      Y + K+ AE + +D+ + + + V I R
Sbjct: 232 -TSTSEVYGDPLEHP-QKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGAGVEVRIAR 289

Query: 247 L 247
           +
Sbjct: 290 I 290

Length = 436

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 59.0 bits (143), Expect = 4e-10
 Identities = 44/183 (24%), Positives = 74/183 (40%), Gaps = 26/183 (14%)

Query: 73  VLVTGGAGYIGSHAALRLL-KDSYRVTIVD-NLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           VLVTGG+G+ G     +LL +    V   D       + A +           ++F+  D
Sbjct: 2   VLVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPN--------IEFLKGD 53

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D   V +  + +  D V H AA   V  +    L +  N+   T  VL++  R GV  
Sbjct: 54  ITDRNDVEQ--ALSGADCVFHTAA--IVPLAGPRDLYWEVNVGG-TQNVLDACQRCGVQK 108

Query: 191 LIYSSTCATYG-------EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVM 243
            +Y+S+ +            E +P          + Y + K +AE I+L+ +   D+   
Sbjct: 109 FVYTSSSSVIFGGQNIHNGDETLPYPPL----DSDMYAETKAIAEIIVLEANGRDDLLTC 164

Query: 244 ILR 246
            LR
Sbjct: 165 ALR 167

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|187565 cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synthase (Arabidopsis thaliana SQD1 and related proteins), extended (e) SDRs

 Score = 58.9 bits (143), Expect = 4e-10
 Identities = 49/156 (31%), Positives = 65/156 (41%), Gaps = 19/156 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG---RLQ---- 125
           VL+ GG GY G   AL L K  + V IVDNL R  I     L+ L P      RL+    
Sbjct: 3   VLILGGDGYCGWPTALHLSKRGHEVCIVDNLVRRRIDVELGLESLTPIASIHERLRAWKE 62

Query: 126 -------FIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLD-PLKYY--HNITSN 175
                  F   D  D + + +  + +  DAV+HFA       S +D     Y  HN    
Sbjct: 63  LTGKTIEFYVGDACDYEFLAELLASHEPDAVVHFAEQRSAPYSMIDREHANYTQHNNVIG 122

Query: 176 TLVVLESMARHGVDT-LIYSSTCATYGEPEKMPITE 210
           TL +L ++     D  L+   T   YG P  + I E
Sbjct: 123 TLNLLFAIKEFDPDCHLVKLGTMGEYGTPN-IDIPE 157

Arabidopsis thaliana UDP-sulfoquinovose-synthase ( SQD1), an extended SDR, catalyzes the transfer of SO(3)(-) to UDP-glucose in the biosynthesis of plant sulfolipids. Members of this subgroup share the conserved SDR catalytic residues, and a partial match to the characteristic extended-SDR NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 382

>gnl|CDD|187559 cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannoheptose 6-epimerase (GME), extended (e) SDRs

 Score = 58.1 bits (141), Expect = 7e-10
 Identities = 44/180 (24%), Positives = 68/180 (37%), Gaps = 19/180 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           ++VTGGAG+IGS+    L +     + +VDNLS G      V  ++     +  F     
Sbjct: 2   IIVTGGAGFIGSNLVKALNERGITDILVVDNLSNGEKFKNLVGLKIADYIDKDDFK---- 57

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYY---HNITSNTLVVLESMARHGV 188
                V K       +A+ H  A +     T +    Y   +N    T  +L       +
Sbjct: 58  ---DWVRKGDENFKIEAIFHQGACS----DTTETDGKYMMDNNYQY-TKELLHYCLEKKI 109

Query: 189 DTLIYSSTCATYG--EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
              IY+S+ A YG          E     P+N YG +K + +       K     V+ LR
Sbjct: 110 -RFIYASSAAVYGNGSLGFAEDIETPNLRPLNVYGYSKLLFDQWARRHGKEVLSQVVGLR 168

This subgroup contains ADP-L-glycero-D-mannoheptose 6-epimerase, an extended SDR, which catalyzes the NAD-dependent interconversion of ADP-D-glycero-D-mannoheptose and ADP-L-glycero-D-mannoheptose. This subgroup has the canonical active site tetrad and NAD(P)-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 317

>gnl|CDD|177856 PLN02206, PLN02206, UDP-glucuronate decarboxylase

 Score = 58.1 bits (140), Expect = 1e-09
 Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 19/181 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V+VTGGAG++GSH   RL+     V +VDN   G    V      F  P   + I  D+ 
Sbjct: 122 VVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENV---MHHFSNP-NFELIRHDV- 176

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
               V     E   D + H A  A       +P+K        TL +L    R G   L+
Sbjct: 177 ----VEPILLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 230

Query: 193 YSSTCATYGEPEKMPITEETPQAPINP------YGKAKKMAEDIILDFSKNSDMAVMILR 246
            +ST   YG+P + P   ET    +NP      Y + K+ AE + +D+ + +++ V I R
Sbjct: 231 -TSTSEVYGDPLQHPQV-ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIAR 288

Query: 247 L 247
           +
Sbjct: 289 I 289

Length = 442

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 57.3 bits (139), Expect = 1e-09
 Identities = 43/183 (23%), Positives = 66/183 (36%), Gaps = 33/183 (18%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TG  G +G      L +  Y V       R      K+                DL 
Sbjct: 2   ILITGATGMLGRALVRLLKERGYEVI---GTGRSRASLFKL----------------DLT 42

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARHGVD 189
           D  AV +   +   D +++ AA   V +   DP         N      +  +    G  
Sbjct: 43  DPDAVEEAIRDYKPDVIINCAAYTRVDKCESDPEL---AYRVNVLAPENLARAAKEVGA- 98

Query: 190 TLIYSST-CATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLV 248
            LI+ ST     G+  K P  EE    P+N YGK+K + E  +L+ +       +ILR  
Sbjct: 99  RLIHISTDYVFDGK--KGPYKEEDAPNPLNVYGKSKLLGEVAVLNANPRY----LILRTS 152

Query: 249 VFF 251
             +
Sbjct: 153 WLY 155

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 30/174 (17%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAV-KVLQELFPEPGRLQFIYADL 131
           VLVTGG G IGS    ++LK + +  I+ +     +  +   L+E FPE  +L+F   D+
Sbjct: 253 VLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPEL-KLRFYIGDV 311

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-------NITSNTLVVLESMA 184
            D   V +    +  D V H AA+ +V      PL  Y+       N+   T  V E+  
Sbjct: 312 RDRDRVERAMEGHKVDIVFHAAALKHV------PLVEYNPEEAIKTNVLG-TENVAEAAI 364

Query: 185 RHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS 238
           ++GV   +  ST              +    P N  G  K++AE +    ++N 
Sbjct: 365 KNGVKKFVLIST--------------DKAVNPTNVMGATKRLAEKLFQAANRNV 404

Length = 588

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score = 57.2 bits (139), Expect = 1e-09
 Identities = 51/199 (25%), Positives = 78/199 (39%), Gaps = 35/199 (17%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           V VTG +G+IGS    RLL+  Y V   V +   G+   V  L EL     RL+   ADL
Sbjct: 1   VCVTGASGFIGSWLVKRLLQRGYTVRATVRDP--GDEKKVAHLLELEGAKERLKLFKADL 58

Query: 132 GDAKAVNKFFSENAFD---AVMHFAA-----VAYVGESTLDPLKYYHNITSNTLVVLESM 183
            D  +      + A D    V H A+          E  ++P          TL VLE+ 
Sbjct: 59  LDYGSF-----DAAIDGCDGVFHVASPVDFDSEDPEEEMIEP------AVKGTLNVLEAC 107

Query: 184 AR-HGVDTLIYSSTCATY----GEPEKMPITEE--TPQAPINPYGK----AKKMAEDIIL 232
           A+   V  ++++S+ A         E   + E   +              +K +AE    
Sbjct: 108 AKAKSVKRVVFTSSVAAVVWNPNRGEGKVVDESCWSDLDFCKKTKLWYALSKTLAEKAAW 167

Query: 233 DFSK--NSDMAVMILRLVV 249
           +F++    D+  +   LVV
Sbjct: 168 EFAEENGLDLVTVNPSLVV 186

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score = 56.9 bits (137), Expect = 2e-09
 Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 21/188 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           VLVTG +G++ SH   +LL+  Y+V   V + S   +  V  L +L  +PGRL+   ADL
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVRDPS--KVKKVNHLLDLDAKPGRLELAVADL 58

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDT 190
            D ++ ++     A   V H A    V  S+ DP +        TL  L++ A    V  
Sbjct: 59  TDEQSFDEVIKGCAG--VFHVATP--VSFSSKDPNEVIKPAIGGTLNALKAAAAAKSVKR 114

Query: 191 LIYSSTCATYGEPE---KMPITEE----------TPQAPINPYGKAKKMAEDIILDFSKN 237
            + +S+  +   P+   +  + +E           P+     Y  +K +AE     F+  
Sbjct: 115 FVLTSSAGSVLIPKPNVEGIVLDEKSWNLEEFDSDPKKSAWVYAASKTLAEKAAWKFADE 174

Query: 238 SDMAVMIL 245
           +++ ++ +
Sbjct: 175 NNIDLITV 182

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 40/183 (21%), Positives = 68/183 (37%), Gaps = 40/183 (21%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+ GG  +IG      LL   + VT+    +RG              P  ++ I  D  
Sbjct: 3   ILIIGGTRFIGKALVEELLAAGHDVTV---FNRGRTKP--------DLPEGVEHIVGDRN 51

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D  A+ +      FD V+    +AY                      L++     V   I
Sbjct: 52  DRDALEELLGGEDFDVVVDT--IAYTPRQVER--------------ALDAFKGR-VKQYI 94

Query: 193 YSSTCATYGEPEKMPITEETP--------QAPINPYGKAKKMAEDIILDFSKNSDMAVMI 244
           + S+ + Y +P +  ITE TP         +    YG+ K+ AED++++ +        I
Sbjct: 95  FISSASVYLKPGR-VITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAA---FPYTI 150

Query: 245 LRL 247
           +R 
Sbjct: 151 VRP 153

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 56.2 bits (136), Expect = 3e-09
 Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 24/168 (14%)

Query: 73  VLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            LV GG+G++G H   +LL+     V + D             +      GR+QF   DL
Sbjct: 2   CLVVGGSGFLGRHLVEQLLRRGNPTVHVFD--------IRPTFELDPSSSGRVQFHTGDL 53

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D + + K F+E   + V H A+         +   YY      T  V+E+  + GV  L
Sbjct: 54  TDPQDLEKAFNEKGPNVVFHTASPD----HGSNDDLYYKVNVQGTRNVIEACRKCGVKKL 109

Query: 192 IYSSTCATY--GEP-----EKMPITEETPQAPINPYGKAKKMAEDIIL 232
           +Y+S+ +    G+      E +P     P    + Y + K +AE ++L
Sbjct: 110 VYTSSASVVFNGQDIINGDESLPY----PDKHQDAYNETKALAEKLVL 153

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

 Score = 55.8 bits (135), Expect = 3e-09
 Identities = 38/176 (21%), Positives = 64/176 (36%), Gaps = 32/176 (18%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +L+TG  G +G+    R L   + V       R  +                     D+
Sbjct: 2   KILITGANGQLGTELR-RALPGEFEVIA---TDRAEL---------------------DI 36

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDT 190
            D  AV +   E   D V++ AA   V ++  +P   +  N T     +  + A  G   
Sbjct: 37  TDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATG-AENLARAAAEVGA-R 94

Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           L++ ST   +   +  P  E     P+N YG++K   E+ +           +ILR
Sbjct: 95  LVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAGPRH----LILR 146

Length = 281

>gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase

 Score = 55.9 bits (135), Expect = 4e-09
 Identities = 41/174 (23%), Positives = 68/174 (39%), Gaps = 29/174 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TG  G +G     +L  +  RV +    S+                        DL 
Sbjct: 2   ILITGANGQLGRELVQQLSPE-GRVVVALTRSQ-----------------------LDLT 37

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D +A+ +       DAV++ AA   V  +  DP K +         +  + ARHG   L+
Sbjct: 38  DPEALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGAR-LV 96

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           + ST   +    K P  E+    P+N YG++K   E  +     N+    +I+R
Sbjct: 97  HISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAVRAAGPNA----LIVR 146

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 55.7 bits (135), Expect = 5e-09
 Identities = 44/164 (26%), Positives = 65/164 (39%), Gaps = 37/164 (22%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG  G +GS     L +  Y   +    +          +EL            DL 
Sbjct: 2   ILVTGHRGLVGSAIVRVLARRGYENVVF--RTS---------KEL------------DLT 38

Query: 133 DAKAVNKFFSENAFDAVMHFAA-VAYVGESTLDPLKYYHNITSNTLV---VLESMARHGV 188
           D +AV  FF +   D V+H AA V  +  +   P  +  +   N L+   V+ +  R GV
Sbjct: 39  DQEAVRAFFEKEKPDYVIHLAAKVGGIVANMTYPADFLRD---NLLINDNVIHAAHRFGV 95

Query: 189 DTLIY-SSTCATYGEPEKMPITEET----PQAPIN-PYGKAKKM 226
             L++  S+C  Y +    PI E      P  P N  Y  AK+ 
Sbjct: 96  KKLVFLGSSC-IYPDLAPQPIDESDLLTGPPEPTNEGYAIAKRA 138

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 54.3 bits (131), Expect = 1e-08
 Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 39/178 (21%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVL-----QELFPEPGRLQ--- 125
           LVTGG G++G H    LL+             G +  V+V       EL  +  +LQ   
Sbjct: 1   LVTGGGGFLGRHIVRLLLR------------EGELQEVRVFDLRFSPELLEDFSKLQVIT 48

Query: 126 FIYADLGDAKAVNKFFSENAFDAVMHFAAVAYV-GESTLDPLKYYHNITSNTLVVLESMA 184
           +I  D+ D + + +  +    D V+H AA+  V G++  D           T  VL++  
Sbjct: 49  YIEGDVTDKQDLRR--ALQGSDVVIHTAAIIDVFGKAYRD--TIMKVNVKGTQNVLDACV 104

Query: 185 RHGVDTLIYSSTCA-----TYGEP-----EKMPITEETPQAPINPYGKAKKMAEDIIL 232
           + GV  L+Y+S+       +YG+P     E  P  E T Q    PY ++K +AE ++L
Sbjct: 105 KAGVRVLVYTSSMEVVGPNSYGQPIVNGDETTPY-ESTHQD---PYPESKALAEKLVL 158

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 53.9 bits (130), Expect = 2e-08
 Identities = 47/170 (27%), Positives = 65/170 (38%), Gaps = 20/170 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V VTGG G++G H   RLL++ ++V +   L R      +  + +         +    G
Sbjct: 1   VFVTGGTGFLGRHLVKRLLENGFKVLV---LVRSE-SLGEAHERIEEAGLEADRVRVLEG 56

Query: 133 DAKAVNKFFSENAF-------DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR 185
           D    N   S  A        D V+H AA         D   +  NI   T  VLE  AR
Sbjct: 57  DLTQPNLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDA--WRTNIDG-TEHVLELAAR 113

Query: 186 HGVDTLIYSSTCATYGEPEKMPITEET----PQAPINPYGKAKKMAEDII 231
             +    Y ST    G  E      ET     Q   NPY ++K  AE ++
Sbjct: 114 LDIQRFHYVSTAYVAGNRE--GNIRETELNPGQNFKNPYEQSKAEAEQLV 161

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|185103 PRK15181, PRK15181, Vi polysaccharide biosynthesis protein TviC; Provisional

 Score = 52.8 bits (126), Expect = 5e-08
 Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 10/183 (5%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NIGAVK--VLQELFPEPGRLQFIY 128
           L+TG AG+IGS     LL  +  V  +DN S G   N+  V+  V +E +    R  FI 
Sbjct: 19  LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQW---SRFIFIQ 75

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+       K  +    D V+H AA+  V  S  DP+          L +L +     V
Sbjct: 76  GDIRKFTDCQK--ACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHV 133

Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLV 248
            +  Y+++ +TYG+   +P  EE    P++PY   K + E     F+++ +   + LR  
Sbjct: 134 SSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYF 193

Query: 249 VFF 251
             F
Sbjct: 194 NVF 196

Length = 348

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 51.3 bits (124), Expect = 1e-07
 Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 34/176 (19%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG--RLQFIYAD 130
           VLVTGG G IGS    ++LK + +  I+   SR      ++ QEL  E    +L+F   D
Sbjct: 1   VLVTGGGGSIGSELCRQILKFNPKKIIL--FSRDEFKLYEIRQELRQEYNDPKLRFFIGD 58

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-------NITSNTLVVLESM 183
           + D + + +   ++  D V H AA+ +V      PL  Y+       N+   T  V E+ 
Sbjct: 59  VRDRERLERAMEQHGVDTVFHAAALKHV------PLVEYNPMEAIKTNVLG-TENVAEAA 111

Query: 184 ARHGVDTLIYSST-CATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS 238
             +GV+  +  ST  A                 P N  G  K++AE +    ++ S
Sbjct: 112 IENGVEKFVLISTDKAVN---------------PTNVMGATKRLAEKLFQAANRES 152

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

>gnl|CDD|233427 TIGR01472, gmd, GDP-mannose 4,6-dehydratase

 Score = 51.4 bits (123), Expect = 2e-07
 Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 12/170 (7%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPEP-----GRLQFI 127
           L+TG  G  GS+ A  LL+  Y V  ++   S  N      ++ ++ +P      R++  
Sbjct: 4   LITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQR---IEHIYEDPHNVNKARMKLH 60

Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESM--AR 185
           Y DL D+  + +   E     + + AA ++V  S   P          TL +LE++    
Sbjct: 61  YGDLTDSSNLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG 120

Query: 186 HGVDTLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDF 234
                  Y +ST   YG+ +++P  E TP  P +PY  AK  A  I +++
Sbjct: 121 LIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHWITVNY 170

Alternate name: GDP-D-mannose dehydratase. This enzyme converts GDP-mannose to GDP-4-dehydro-6-deoxy-D-mannose, the first of three steps for the conversion of GDP-mannose to GDP-fucose in animals, plants, and bacteria. In bacteria, GDP-L-fucose acts as a precursor of surface antigens such as the extracellular polysaccharide colanic acid of E. coli. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 343

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 51.0 bits (122), Expect = 2e-07
 Identities = 44/172 (25%), Positives = 69/172 (40%), Gaps = 23/172 (13%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYR---VTIVDN-LSRGNIGAVKVLQELFPEPGRLQFIYA 129
           LVTGG G++G H    LL+       + ++D       I       E       +  I  
Sbjct: 3   LVTGGGGFLGQHIIRLLLERKEELKEIRVLDKAFGPELIE----HFEKSQGKTYVTDIEG 58

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKY--YHNITSN-TLVVLESMARH 186
           D+ D   +  F +      V+H AA+         P  Y     +  N T  VLE+  ++
Sbjct: 59  DIKDLSFL--FRACQGVSVVIHTAAIV----DVFGPPNYEELEEVNVNGTQAVLEACVQN 112

Query: 187 GVDTLIYSSTCATYGEPEKMPIT----EETPQAPIN--PYGKAKKMAEDIIL 232
            V  L+Y+S+    G   K        E+TP    +  PY  +K +AE+I+L
Sbjct: 113 NVKRLVYTSSIEVAGPNFKGRPIFNGVEDTPYEDTSTPPYASSKLLAENIVL 164

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 49.2 bits (118), Expect = 4e-07
 Identities = 31/146 (21%), Positives = 55/146 (37%), Gaps = 18/146 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +  IG   A RL ++  +V + D  +   +  +  ++      G    + AD+ 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLAD-RNEEALAELAAIEA---LGGNAVAVQADVS 56

Query: 133 DAKAVNKFFSE--NAF---DAVMHFAAVAYVGESTLDPLKYY-----HNITSNTLV---V 179
           D + V     E    F   D +++ A +A  G       + +      N+T   L+    
Sbjct: 57  DEEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAA 116

Query: 180 LESMARHGVDTLIY-SSTCATYGEPE 204
           L  M + G   ++  SS       P 
Sbjct: 117 LPHMKKQGGGRIVNISSVAGLRPLPG 142

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 49.4 bits (119), Expect = 5e-07
 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 9/88 (10%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
             LVTG +  IG   ALRL  D  +V I D        A  +  EL    G  + +  D+
Sbjct: 7   TALVTGASRGIGRAIALRLAADGAKVVIYD---SNEEAAEALAAELRAAGGEARVLVFDV 63

Query: 132 GDAKAVNKFFSENAFDAVM-HFAAVAYV 158
            D  AV         +A +  F A+  +
Sbjct: 64  SDEAAV-----RALIEAAVEAFGALDIL 86

Length = 246

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 49.6 bits (119), Expect = 6e-07
 Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 10/166 (6%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVT--IVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           VLVTG  G+ GS  +L L +   +V    +D  +  N+  +  L         +     D
Sbjct: 7   VLVTGHTGFKGSWLSLWLQELGAKVIGYSLDPPTNPNLFELANLDNK------ISSTRGD 60

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VD 189
           + D  A+ +   E   + V H AA   V  S  DP++ +      T+ +LE++   G V 
Sbjct: 61  IRDLNALREAIREYEPEIVFHLAAQPLVRLSYKDPVETFETNVMGTVNLLEAIRETGSVK 120

Query: 190 TLIYSSTCATYGEPEKM-PITEETPQAPINPYGKAKKMAEDIILDF 234
            ++  ++   Y   E      E  P    +PY  +K  AE II  +
Sbjct: 121 AVVNVTSDKCYENKEWGWGYRENDPLGGHDPYSSSKGCAELIISSY 166

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.7 bits (117), Expect = 7e-07
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 4/67 (5%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYAD 130
             LVTG A  +G   ALRL +    V +     R +  A + L E     G R Q + AD
Sbjct: 8   VALVTGAARGLGRAIALRLARAGADVVVH---YRSDEEAAEELVEAVEALGRRAQAVQAD 64

Query: 131 LGDAKAV 137
           + D  A+
Sbjct: 65  VTDKAAL 71

Length = 249

>gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain

 Score = 48.8 bits (117), Expect = 9e-07
 Identities = 39/153 (25%), Positives = 58/153 (37%), Gaps = 27/153 (17%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG  G +G     RLL +     +                       R +    DL 
Sbjct: 1   ILVTGANGQLGR-ELTRLLAERGVEVVA--------------------LDRPEL---DLT 36

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDTL 191
           D +AV     E   D V++ AA   V ++  +P   Y  N       + E+ A  G   L
Sbjct: 37  DPEAVAALVREARPDVVVNAAAYTAVDKAESEPELAYAVNALG-PGNLAEACAARGA-PL 94

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAK 224
           I+ ST   +   +  P  E+ P  P+N YG+ K
Sbjct: 95  IHISTDYVFDGAKGGPYREDDPTGPLNVYGRTK 127

L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 41/179 (22%), Positives = 64/179 (35%), Gaps = 22/179 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
             V G +G IG   A  L +  + V +V                       ++ + AD  
Sbjct: 2   AHVLGASGPIGREVARELRRRGWDVRLVSRSGSKL-----------AWLPGVEIVAADAM 50

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           DA +V    +  A D + H A  AY     L P      +  N +    + A      L+
Sbjct: 51  DASSVIAA-ARGA-DVIYHCANPAYTRWEELFP-----PLMENVV----AAAEANGAKLV 99

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFF 251
                  YG     PITE+TP  P    G+ +   E+ +L      D+  +I+R   F+
Sbjct: 100 LPGNVYMYGPQAGSPITEDTPFQPTTRKGRIRAEMEERLLAAHAKGDIRALIVRAPDFY 158

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|178259 PLN02653, PLN02653, GDP-mannose 4,6-dehydratase

 Score = 47.5 bits (113), Expect = 3e-06
 Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 10/175 (5%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVK-VLQELFPEPGRLQFIYADL 131
           L+TG  G  GS+    LL   Y V  I+   S  N   +  +  +  P   R++  Y DL
Sbjct: 10  LITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDL 69

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            DA ++ ++  +   D V + AA ++V  S   P      + +  L +LE++  HG +T 
Sbjct: 70  SDASSLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETG 129

Query: 192 IY-----SSTCATYGE-PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
                  + +   YG  P   P +E TP  P +PY  AK  A    +++ +   +
Sbjct: 130 RQIKYYQAGSSEMYGSTPP--PQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGL 182

Length = 340

>gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs

 Score = 46.3 bits (110), Expect = 5e-06
 Identities = 44/165 (26%), Positives = 65/165 (39%), Gaps = 18/165 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+TGG GY G      L K    V + D          +  QEL      ++FI AD+ 
Sbjct: 2   VLITGGGGYFGFRLGCALAKSGVHVILFD--------IRRPQQELPEG---IKFIQADVR 50

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D   + K  +    D V H A+    G   L+           T  +++   R  V  LI
Sbjct: 51  DLSQLEKAVA--GVDCVFHIASYGMSGREQLNRELIEEINVRGTENIIQVCVRRRVPRLI 108

Query: 193 YSSTC-ATYGEPEKMPITEETPQAP----INPYGKAKKMAEDIIL 232
           Y+ST    +G        E  P  P    ++ Y + K +AE ++L
Sbjct: 109 YTSTFNVIFGGQPIRNGDESLPYLPLDLHVDHYSRTKSIAEQLVL 153

An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339

>gnl|CDD|215310 PLN02572, PLN02572, UDP-sulfoquinovose synthase

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 43/151 (28%), Positives = 58/151 (38%), Gaps = 18/151 (11%)

Query: 71  THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-------- 122
             V+V GG GY G   AL L K  Y V IVDNL R        L  L P           
Sbjct: 48  KKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRW 107

Query: 123 ------RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN- 175
                  ++    D+ D + +++ F     DAV+HF        S +D  +      +N 
Sbjct: 108 KEVSGKEIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNV 167

Query: 176 --TLVVLESMARHGVDT-LIYSSTCATYGEP 203
             TL VL ++     D  L+   T   YG P
Sbjct: 168 IGTLNVLFAIKEFAPDCHLVKLGTMGEYGTP 198

Length = 442

>gnl|CDD|187580 cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 45/164 (27%), Positives = 67/164 (40%), Gaps = 26/164 (15%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQ-----FI 127
           +L+TGG G IGS  A  LL+  Y             G   V+     +P         F 
Sbjct: 2   ILITGGLGQIGSELAK-LLRKRY-------------GKDNVIASDIRKPPAHVVLSGPFE 47

Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAV-AYVGESTLDPLKYYHNITSNTLVVLESMARH 186
           Y D+ D K++ +    +    ++H AA+ + VGE    PL +  N+      VLE    H
Sbjct: 48  YLDVLDFKSLEEIVVNHKITWIIHLAALLSAVGEKNP-PLAWDVNMNG-LHNVLELAREH 105

Query: 187 GVDTLIYSSTCATYGEPE--KMPITEETPQAPINPYGKAKKMAE 228
               +   ST   +G P   +    ++T Q P   YG +K  AE
Sbjct: 106 N-LRIFVPSTIGAFG-PTTPRNNTPDDTIQRPRTIYGVSKVAAE 147

This subgroup contains members identified as L-threonine dehydrogenase (TDH). TDH catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. This group is distinct from TDHs that are members of the medium chain dehydrogenase/reductase family. This group has the NAD-binding motif and active site tetrad of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 26/99 (26%), Positives = 36/99 (36%), Gaps = 8/99 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG A  IG   A  L  + YRV +  N S     A ++  EL         + ADL 
Sbjct: 3   ALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEA--EAQRLKDELNALRNSAVLVQADLS 60

Query: 133 DAKA----VNKFFSE-NAFDAVMHFAAVAYVGESTLDPL 166
           D  A    V   F      D +++ A+  +         
Sbjct: 61  DFAACADLVAAAFRAFGRCDVLVNNASA-FYPTPLGQGS 98

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 40/150 (26%), Positives = 52/150 (34%), Gaps = 31/150 (20%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGG G+IG     RL K  + VTI   L+R             P PG       +  
Sbjct: 1   ILITGGTGFIGRALTQRLTKRGHEVTI---LTRS------------PPPGANTKW--EGY 43

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPL---KYYHNI------TSNTLVVLESM 183
              A     S    DAV++ A     GE   D     +    I      T+  LV   + 
Sbjct: 44  KPWAGEDADSLEGADAVINLA-----GEPIADKRWTEERKQEIRDSRIDTTRLLVEAIAA 98

Query: 184 ARHGVDTLIYSSTCATYGEPEKMPITEETP 213
           A       I +S    YG  E    TEE  
Sbjct: 99  AEQKPKVFISASAVGYYGPSEDREYTEEDS 128

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 42/183 (22%), Positives = 68/183 (37%), Gaps = 36/183 (19%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           VLV G  G +G H    LL   Y+V  +V + S+              E    + +  DL
Sbjct: 2   VLVVGATGKVGRHVVRELLDRGYQVRALVRDPSQAE----------KLEAAGAEVVVGDL 51

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLK--YYHNITSNTLVVLESMARHGVD 189
            DA+++    +    DAV+  AA +  G+         Y  NI      ++++  + GV 
Sbjct: 52  TDAESLAA--ALEGIDAVI-SAAGSG-GKGGPRTEAVDYDGNIN-----LIDAAKKAGVK 102

Query: 190 TLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLV 248
             +  SS  A         +          PY  AK+ AED +    + S +   I+R  
Sbjct: 103 RFVLVSSIGADKPSHPLEALG---------PYLDAKRKAEDYL----RASGLDYTIVRPG 149

Query: 249 VFF 251
              
Sbjct: 150 GLT 152

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 43.0 bits (102), Expect = 5e-05
 Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 8/90 (8%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
             LVTG A  IG   A+RL  D   V +VD        A    + +    G+ +    D+
Sbjct: 8   VALVTGAARGIGRAIAVRLAADGAEVIVVD---ICGDDAAATAELVEAAGGKARARQVDV 64

Query: 132 GDAKAVNKFFS--ENAF---DAVMHFAAVA 156
            D  A+    +     F   D ++  A + 
Sbjct: 65  RDRAALKAAVAAGVEDFGRLDILVANAGIF 94

Length = 251

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 42.6 bits (101), Expect = 9e-05
 Identities = 32/152 (21%), Positives = 46/152 (30%), Gaps = 31/152 (20%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +++TGG G+IG     RL    + V +   LSR             P            
Sbjct: 1   KIVITGGTGFIGRALTRRLTAAGHEVVV---LSR------------RPGKAEGLAEVITW 45

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPL---KYYHNI------TSNTLVVLES 182
                        A DAV++ A     GE              I      ++  LV   +
Sbjct: 46  DGLSLGPWEL-PGA-DAVINLA-----GEPIACRRWTEANKKEILSSRIESTRVLVEAIA 98

Query: 183 MARHGVDTLIYSSTCATYGEPEKMPITEETPQ 214
            A      LI +S    YG      +TE +P 
Sbjct: 99  NAPAPPKVLISASAVGYYGHSGDEVLTENSPS 130

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 41/179 (22%), Positives = 64/179 (35%), Gaps = 33/179 (18%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           + V G  G  G      LL   ++VT    LSR    A             +  +  DL 
Sbjct: 1   IAVIGATGKTGRRLVKELLARGHQVTA---LSRNPSKAPAP---------GVTPVQKDLF 48

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D   + +  +    DAV     V   G    D     H        +L++ AR GV  ++
Sbjct: 49  DLADLAEALAG--VDAV-----VDAFGARPDDSDGVKH--------LLDAAARAGVRRIV 93

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFF 251
             S    Y +       ++ P  P  PY +AK  AE+++    + S +   I+R    F
Sbjct: 94  VVSAAGLYRDEPGTFRLDDAPLFP--PYARAKAAAEELL----RASGLDWTIVRPGALF 146

Length = 182

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +  IG   AL+L K+  +V I         GA +V++EL     +   +  D+ 
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVII--TYRSSEEGAEEVVEELKAYGVKALGVVCDVS 58

Query: 133 DAKAVNKFFSE 143
           D + V     E
Sbjct: 59  DREDVKAVVEE 69

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 43/188 (22%), Positives = 75/188 (39%), Gaps = 32/188 (17%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL- 131
           + +TG  G+I SH A RL  + + +   D     ++      +++F      +F   DL 
Sbjct: 24  ICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMS-----EDMFCH----EFHLVDLR 74

Query: 132 --GDAKAVNKFFSENAFDAVMHFAA-VAYVG--ESTLDPLKYYHNITSNTLVVLESMARH 186
              +   V K       D V + AA +  +G  +S    + Y  N T  +  +LE+   +
Sbjct: 75  VMENCLKVTK-----GVDHVFNLAADMGGMGFIQSNHSVIMY--NNTMISFNMLEAARIN 127

Query: 187 GVDTLIYSSTCATYGEPEKMPITEET--------PQAPINPYGKAKKMAEDIILDFSKNS 238
           GV    Y+S+   Y  PE   +            P  P + YG  K   E++   ++K+ 
Sbjct: 128 GVKRFFYASSACIY--PEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDF 185

Query: 239 DMAVMILR 246
            +   I R
Sbjct: 186 GIECRIGR 193

Length = 370

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            ++TG A  IG   A RL  D + + + D        A   +QE+         + AD+ 
Sbjct: 5   AIITGAAQGIGRAIAERLAADGFNIVLADLNL--EEAAKSTIQEISEAGYNAVAVGADVT 62

Query: 133 DAKAVNKFFSENA-----FDAVMHFAAVA 156
           D   V     +       FD +++ A +A
Sbjct: 63  DKDDVEALIDQAVEKFGSFDVMVNNAGIA 91

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 41.0 bits (96), Expect = 3e-04
 Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 5/75 (6%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQ--FIYA 129
             LVTG +  IG   A  L ++  RV +     R    A + L     E G  +   + A
Sbjct: 7   VALVTGASSGIGRAIARALAREGARVVVAA--RRSEEEAAEALAAAIKEAGGGRAAAVAA 64

Query: 130 DLGD-AKAVNKFFSE 143
           D+ D  ++V    + 
Sbjct: 65  DVSDDEESVEALVAA 79

Length = 251

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 40.3 bits (95), Expect = 4e-04
 Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 15/146 (10%)

Query: 71  THVLVTGGAGYIGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVLQELFPEPGRLQFIYA 129
            HVL+TGG+  IG   A  L+K+   V IV  + S+      ++  E      ++ +I A
Sbjct: 2   KHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYISA 61

Query: 130 DLGDAKAVNKFFSENAF-----DAVMHFAAVAYVGE-STLDPLKYYHNITSNTL------ 177
           DL D + V + F++        D V++ A ++  G    L   ++   +  N        
Sbjct: 62  DLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLNVA 121

Query: 178 -VVLESM-ARHGVDTLIYSSTCATYG 201
             VL  M  +     +  SS  A  G
Sbjct: 122 HAVLPLMKEQRPGHIVFVSSQAALVG 147

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 8/88 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V++TG +  +G +AA  L K  + V +     R    A    QEL   P     I+ DLG
Sbjct: 9   VIITGASSGVGLYAAKALAKRGWHVIMA---CRNLKKAEAAAQELGIPPDSYTIIHIDLG 65

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAV 155
           D  +V +F  +        DA++  AAV
Sbjct: 66  DLDSVRRFVDDFRALGKPLDALVCNAAV 93

Length = 322

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 40.5 bits (95), Expect = 5e-04
 Identities = 52/209 (24%), Positives = 80/209 (38%), Gaps = 34/209 (16%)

Query: 54  SPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVD---NLSRGNIGA 110
           +   ++   F   E     VLV G  GYIG      L++  Y V  V    +  RG  G 
Sbjct: 44  ATAAAAAQSFRSKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGK 103

Query: 111 VKVLQELFPEPGRLQFIYADLGDAKAVNK-FFSEN-AFDAVMHFAAVAYVGESTLDPLKY 168
               +EL       + ++ D+ DA ++ K  FSE    D V+   A    G    D  K 
Sbjct: 104 EDTKKELPG----AEVVFGDVTDADSLRKVLFSEGDPVDVVVSCLASRTGGVK--DSWKI 157

Query: 169 YHNITSNTLVV-LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAK-KM 226
            +  T N+L    E  A+H V   + S+ C                Q P+  + +AK K 
Sbjct: 158 DYQATKNSLDAGREVGAKHFV---LLSAICV---------------QKPLLEFQRAKLKF 199

Query: 227 AEDIILDFSKNSDMAVMILRLVVFFTLVA 255
             ++    + +SD    I+R   FF  + 
Sbjct: 200 EAELQ---ALDSDFTYSIVRPTAFFKSLG 225

Length = 390

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 39.7 bits (93), Expect = 6e-04
 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 7/85 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYADL 131
           VL+TGG+G +G   A+RL  D   V ++D    RG   A  V   +    G+   +  D+
Sbjct: 9   VLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDV 68

Query: 132 GDAKAVNKFFSENAFDA-VMHFAAV 155
            D  A        A DA V  F  +
Sbjct: 69  RDFAAT-----RAALDAGVEEFGRL 88

Length = 249

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 39.9 bits (94), Expect = 7e-04
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVT  +  IG   A  L ++  RV I    +R      +   EL      +  + ADL 
Sbjct: 4   ALVTAASSGIGLAIARALAREGARVAI---CARNRENLERAASELRAGGAGVLAVVADLT 60

Query: 133 DAKAVNKFFSE 143
           D + +++   +
Sbjct: 61  DPEDIDRLVEK 71

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 39.7 bits (93), Expect = 7e-04
 Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 11/107 (10%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD 133
           LVTGGA  IG   A RL KD + V + D        A +  +E+    G+      D+ D
Sbjct: 4   LVTGGAQGIGKGIAERLAKDGFAVAVAD---LNEETAKETAKEINQAGGKAVAYKLDVSD 60

Query: 134 AKAVNKFFSENA-----FDAVMHFAAVAYVG---ESTLDPLKYYHNI 172
              V     + A     FD +++ A VA +    E T + LK  +N+
Sbjct: 61  KDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNV 107

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 8/89 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG A  +G+  A  L +    V   D L+     A ++   L    GR   I ADL 
Sbjct: 10  ALVTGAARGLGAAFAEALAEAGATVAFNDGLAA---EARELAAALEAAGGRAHAIAADLA 66

Query: 133 DAKAVNKFFSENA-----FDAVMHFAAVA 156
           D  +V +FF   A      D +++ A + 
Sbjct: 67  DPASVQRFFDAAAAALGGLDGLVNNAGIT 95

Length = 250

>gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 9/116 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVT--IVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           VLVTG  G+ GS  +L LL+    V    +D  +  N      L EL     +++  + D
Sbjct: 7   VLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPN------LFELLNLAKKIEDHFGD 60

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
           + DA  + K  +E   + V H AA   V +S  DPL+ +      T+ +LE+  R 
Sbjct: 61  IRDAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEA-IRA 115

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +  IG   ALRL  +  +V + D   R    A + ++E+    G    + AD+ 
Sbjct: 3   ALVTGASRGIGRAIALRLAAEGAKVAVTD---RSEEAAAETVEEIKALGGNAAALEADVS 59

Query: 133 DAKAVNKFFSE 143
           D +AV     +
Sbjct: 60  DREAVEALVEK 70

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 38.7 bits (91), Expect = 0.001
 Identities = 42/201 (20%), Positives = 76/201 (37%), Gaps = 38/201 (18%)

Query: 75  VTGGAGYIGSHAALRLLKDSYRVTIV----------------DNLSRGNIG-AVKVLQEL 117
           +TG  G++G     +LL+ +  V I                   L +  +   +K L+ +
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERI 60

Query: 118 FPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYY--HNITSN 175
            P  G L     +LG +    +  +E   D ++H AA      + ++P       N+   
Sbjct: 61  IPVAGDL--SEPNLGLSDEDFQELAEEV-DVIIHNAATV----NFVEPYSDLRATNVLG- 112

Query: 176 TLVVLESMARHGVDTLIYSSTCATYGE-----PEKMPITEETPQAPI----NPYGKAKKM 226
           T  VL    +       + ST    GE      EK    +E   A +    N Y ++K +
Sbjct: 113 TREVLRLAKQMKKLPFHHVSTAYVNGERGGLLEEKPYKLDEDEPALLGGLPNGYTQSKWL 172

Query: 227 AEDIILDFSKNSDMAVMILRL 247
           AE ++ + +    + V+I R 
Sbjct: 173 AEQLVREAAGG--LPVVIYRP 191

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|132628 TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehydratase

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 22/158 (13%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGG G  G     RLL++ Y    +   SR  +   + +Q+ FP P  L+F   D+ 
Sbjct: 7   ILITGGTGSFGKAFISRLLEN-YNPKKIIIYSRDELKQWE-MQQKFPAP-CLRFFIGDVR 63

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDTL 191
           D + + +       D V+H AA+  V  +  +P +    NI     V+  ++   GV  +
Sbjct: 64  DKERLTRAL--RGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRV 120

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED 229
           +  ST              +    PIN YG A K+A D
Sbjct: 121 VALST--------------DKAANPINLYG-ATKLASD 143

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. Length = 324

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 10/89 (11%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI-GAVKVLQELFPEPGRLQFIYADLG 132
           LVTG    IG   A RL++D ++V IVD     N   A     +L  + G+   + AD+ 
Sbjct: 6   LVTGAGQGIGFAIAKRLVEDGFKVAIVDY----NEETAQAAADKLSKDGGKAIAVKADVS 61

Query: 133 DAKAVNKFFSENA-----FDAVMHFAAVA 156
           D   V     +        + V++ A VA
Sbjct: 62  DRDQVFAAVRQVVDTFGDLNVVVNNAGVA 90

Length = 256

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 41/207 (19%), Positives = 78/207 (37%), Gaps = 44/207 (21%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIV------------DNL-SRGNIGAVKVLQELF 118
            VL+TG  G++G++    LLK      I             + L        + +  EL 
Sbjct: 1   TVLLTGATGFLGAYLLRELLKRKNVSKIYCLVRAKDEEAALERLIDNLKEYGLNLWDELE 60

Query: 119 PEPGRLQFIYADLGDAK---AVNKFFSE-NAFDAVMHFAA-VAYVGESTLDPLKYYH--- 170
               R++ +  DL       + + +       D ++H  A V +V          Y    
Sbjct: 61  LS--RIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNGANVNWV--------YPYEELK 110

Query: 171 --NITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAPI-------NPY 220
             N+   T  +L+ +A  G +  L + ST + +   E   + +E     +       N Y
Sbjct: 111 PANVLG-TKELLK-LAATGKLKPLHFVSTLSVFSAEEYNALDDEESDDMLESQNGLPNGY 168

Query: 221 GKAKKMAEDIILDFSKNSDMAVMILRL 247
            ++K +AE ++ + + N  + V I+R 
Sbjct: 169 IQSKWVAEKLLREAA-NRGLPVAIIRP 194

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 11/84 (13%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            V VTG  G+IGS     L+   + V     L+R + GA K+      E    Q    DL
Sbjct: 2   KVFVTGATGFIGSAVVRELVAAGHEVV---GLARSDAGAAKL------EAAGAQVHRGDL 52

Query: 132 GDAKAVNKFFSENAFDAVMHFAAV 155
            D   + K  +E   DAV+H A  
Sbjct: 53  EDLDILRKAAAEA--DAVIHLAFT 74

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 37.5 bits (88), Expect = 0.002
 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 7/90 (7%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYAD 130
            VL+TGG G +G   A  L  +  R  ++ +      GA +++ EL    G  +     D
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAEL-EALGAEVTVAACD 60

Query: 131 LGDAKAVNKFFSENA-----FDAVMHFAAV 155
           + D  A+    +         D V+H A V
Sbjct: 61  VADRDALAALLAALPAALGPLDGVVHNAGV 90

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 22/98 (22%), Positives = 35/98 (35%), Gaps = 10/98 (10%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG--RLQFIYA 129
            V++TG    IG   A  L K    V I     R      +   E+  E G  +++ I  
Sbjct: 3   VVVITGANSGIGKETARELAKRGAHVIIA---CRNEEKGEEAAAEIKKETGNAKVEVIQL 59

Query: 130 DLGDAKAVNKFFSE-----NAFDAVMHFAAVAYVGEST 162
           DL    +V +F  E        D +++ A +       
Sbjct: 60  DLSSLASVRQFAEEFLARFPRLDILINNAGIMAPPRRL 97

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 8/69 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTG  GY+G     RLL++ ++V     L R                 R+  +  DL 
Sbjct: 1   VLVTGATGYVGGRLVPRLLQEGHQVRA---LVRSPEKLADRPWS-----ERVTVVRGDLE 52

Query: 133 DAKAVNKFF 141
           D +++    
Sbjct: 53  DPESLRAAL 61

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 38.5 bits (90), Expect = 0.003
 Identities = 51/206 (24%), Positives = 74/206 (35%), Gaps = 43/206 (20%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN--IGAVKVLQELFPEPGRLQFIYA 129
           +VL+TG  G++G++  L LL  S    I   L R      A+  L++ F        + A
Sbjct: 2   NVLLTGATGFLGAYLLLELLDRSDAKVIC--LVRAQSDEAALARLEKTFDLYRHWDELSA 59

Query: 130 D-----LGDAKAVNKF-FSE-------NAFDAVMHFAA-VAYVGE-STLDPLKYYHNITS 174
           D      GD  A      SE          D ++H AA V +V   S L          +
Sbjct: 60  DRVEVVAGD-LAEPDLGLSERTWQELAENVDLIIHNAALVNHVFPYSELRG--------A 110

Query: 175 NTLV---VLESMARHGVDTLIYSSTCATYGEPEKMPITEETP----------QAPINPYG 221
           N L    VL   A      L Y S+ +  GE E                   Q     YG
Sbjct: 111 NVLGTAEVLRLAATGKPKPLHYVSSISV-GETEYYSNFTVDFDEISPTRNVGQGLAGGYG 169

Query: 222 KAKKMAEDIILDFSKNSDMAVMILRL 247
           ++K +AE ++ +      + V I R 
Sbjct: 170 RSKWVAEKLVREAGDRG-LPVTIFRP 194

Length = 382

>gnl|CDD|182998 PRK11150, rfaD, ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

 Score = 38.1 bits (89), Expect = 0.003
 Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 23/159 (14%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA-- 129
           ++VTGGAG+IGS+    L       + +VDNL  G      V  ++     +  F+    
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLDIADYMDKEDFLAQIM 61

Query: 130 ---DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKY-YHNITSNTLVVLESMAR 185
              D GD +A+   F E A  +   +              KY   N    +  +L     
Sbjct: 62  AGDDFGDIEAI---FHEGACSSTTEWDG------------KYMMDNNYQYSKELLHYCLE 106

Query: 186 HGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAK 224
             +  L Y+S+ ATYG      I E   + P+N YG +K
Sbjct: 107 REIPFL-YASSAATYGGRTDDFIEEREYEKPLNVYGYSK 144

Length = 308

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 37.9 bits (89), Expect = 0.003
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            +VTG +G IG   A  L K+  +V I  +++     A ++L+E+  E G    + AD+ 
Sbjct: 8   AIVTGASGGIGRAIAELLAKEGAKVVIAYDINEE--AAQELLEEIKEEGGDAIAVKADVS 65

Query: 133 DAKAVNKFFSE 143
             + V     +
Sbjct: 66  SEEDVENLVEQ 76

Length = 247

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 37.6 bits (88), Expect = 0.003
 Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 17/104 (16%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD 133
           LVTG +  IG   A RL +D   V +  N +     A +V+ E+    G+   + AD+ D
Sbjct: 7   LVTGASRGIGRAIAKRLARDGASVVV--NYASSKAAAEEVVAEIEAAGGKAIAVQADVSD 64

Query: 134 AKAVNKFFSE-------------NAFDAVMHFAAVAYVGESTLD 164
              V + F               NA   VM    +A   E   D
Sbjct: 65  PSQVARLFDAAEKAFGGVDILVNNA--GVMLKKPIAETSEEEFD 106

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
             ++TGGA  IG   A  LLK   +V I+D     N GA   LQ + P+  +  F+  D
Sbjct: 2   VAIITGGASGIGLATAKLLLKKGAKVAILD--RNENPGAAAELQAINPK-VKATFVQCD 57

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

 Score = 37.6 bits (88), Expect = 0.004
 Identities = 42/150 (28%), Positives = 58/150 (38%), Gaps = 31/150 (20%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGG G IG     RL K  ++VTI   L+R      K  Q L P     + + AD  
Sbjct: 1   ILITGGTGLIGRALTARLRKGGHQVTI---LTR---RPPKASQNLHPNVTLWEGL-ADAL 53

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPL---KYYHNI------TSNTLVVLESM 183
                         DAV++ A     GE   +     K    I      T+  LV L + 
Sbjct: 54  TL----------GIDAVINLA-----GEPIAERRWTEKQKEEIRQSRINTTEKLVELIAA 98

Query: 184 ARHGVDTLIYSSTCATYGEPEKMPITEETP 213
           +      LI +S    YG      +TEE+P
Sbjct: 99  SETKPKVLISASAVGYYGHSGDRVVTEESP 128

Length = 297

>gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase

 Score = 37.9 bits (88), Expect = 0.004
 Identities = 45/178 (25%), Positives = 66/178 (37%), Gaps = 34/178 (19%)

Query: 67  EEGVTHVLVTGGAGYIGSHAALRLLKDSYRV--TIVDNLSRGNIGAVKVLQELFPEPGRL 124
           E       VTG  GYIGS     LL+  Y V  T+ D            L   + E  RL
Sbjct: 7   ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRD------PAKSLHLLSKWKEGDRL 60

Query: 125 QFIYADLGDAKAVNKFFSENAFDAVMHFAAV-------------AYVGESTLDPLKYYHN 171
           +   ADL +  + ++       D V H AA               YV    +DP      
Sbjct: 61  RLFRADLQEEGSFDEAVK--GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDP------ 112

Query: 172 ITSNTLVVLESMARHG-VDTLIYSSTCATY---GEPEKM-PITEETPQAPINPYGKAK 224
               TL VL+S  +   V  ++++S+ +T        +   + +ET Q PI+     K
Sbjct: 113 AIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTK 170

Length = 353

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	267
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.97
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.97
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.97
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.97
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.97
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.97
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.96
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.96
PLN02572	442	UDP-sulfoquinovose synthase	99.96
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.96
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.96
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.96
PLN02653	340	GDP-mannose 4,6-dehydratase	99.96
PLN02214	342	cinnamoyl-CoA reductase	99.96
PLN02240	352	UDP-glucose 4-epimerase	99.96
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.96
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.95
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.95
PLN02427	386	UDP-apiose/xylose synthase	99.95
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.95
PLN00198	338	anthocyanidin reductase; Provisional	99.95
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.95
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.95
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.95
PLN02650	351	dihydroflavonol-4-reductase	99.95
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.95
PRK08339	263	short chain dehydrogenase; Provisional	99.95
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.95
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.95
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.95
PRK05876	275	short chain dehydrogenase; Provisional	99.95
PRK05854	313	short chain dehydrogenase; Provisional	99.95
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.94
PRK07063	260	short chain dehydrogenase; Provisional	99.94
PRK08589	272	short chain dehydrogenase; Validated	99.94
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.94
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.94
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.94
PRK05993	277	short chain dehydrogenase; Provisional	99.94
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.94
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.94
PRK06139	330	short chain dehydrogenase; Provisional	99.94
PRK06197	306	short chain dehydrogenase; Provisional	99.94
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.94
PRK07478	254	short chain dehydrogenase; Provisional	99.94
PLN02260	668	probable rhamnose biosynthetic enzyme	99.94
PRK07062	265	short chain dehydrogenase; Provisional	99.94
PLN02583	297	cinnamoyl-CoA reductase	99.94
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.94
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.93
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.93
PRK06398	258	aldose dehydrogenase; Validated	99.93
PRK06114	254	short chain dehydrogenase; Provisional	99.93
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.93
PRK06196	315	oxidoreductase; Provisional	99.93
PLN02686	367	cinnamoyl-CoA reductase	99.93
PRK07024	257	short chain dehydrogenase; Provisional	99.93
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.93
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.93
PRK07109	334	short chain dehydrogenase; Provisional	99.93
KOG0725	270	consensus Reductases with broad range of substrate	99.93
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.93
PLN02206	442	UDP-glucuronate decarboxylase	99.93
PRK06194	287	hypothetical protein; Provisional	99.93
PRK06128	300	oxidoreductase; Provisional	99.93
PRK06179	270	short chain dehydrogenase; Provisional	99.93
PLN02780	320	ketoreductase/ oxidoreductase	99.93
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.93
PRK05866	293	short chain dehydrogenase; Provisional	99.93
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.93
PRK07825	273	short chain dehydrogenase; Provisional	99.93
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.93
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.93
PRK08303	305	short chain dehydrogenase; Provisional	99.93
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.93
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.93
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.93
KOG1208	314	consensus Dehydrogenases with different specificit	99.93
PRK12747	252	short chain dehydrogenase; Provisional	99.93
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.93
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.93
PRK05867	253	short chain dehydrogenase; Provisional	99.93
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.93
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.93
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.93
PRK07791	286	short chain dehydrogenase; Provisional	99.93
PRK06182	273	short chain dehydrogenase; Validated	99.93
PRK06172	253	short chain dehydrogenase; Provisional	99.93
PRK07454	241	short chain dehydrogenase; Provisional	99.93
PRK06523	260	short chain dehydrogenase; Provisional	99.93
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.93
PRK06180	277	short chain dehydrogenase; Provisional	99.93
PRK05650	270	short chain dehydrogenase; Provisional	99.93
PRK06482	276	short chain dehydrogenase; Provisional	99.93
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.93
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.93
PRK08862	227	short chain dehydrogenase; Provisional	99.93
PRK07985	294	oxidoreductase; Provisional	99.93
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.93
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.93
PRK05872	296	short chain dehydrogenase; Provisional	99.93
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.93
PRK08265	261	short chain dehydrogenase; Provisional	99.92
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.92
PRK05599	246	hypothetical protein; Provisional	99.92
PRK07904	253	short chain dehydrogenase; Provisional	99.92
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.92
PRK07035	252	short chain dehydrogenase; Provisional	99.92
PRK07890	258	short chain dehydrogenase; Provisional	99.92
PRK08643	256	acetoin reductase; Validated	99.92
PRK08263	275	short chain dehydrogenase; Provisional	99.92
PRK05717	255	oxidoreductase; Validated	99.92
PRK08278	273	short chain dehydrogenase; Provisional	99.92
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.92
PLN02253	280	xanthoxin dehydrogenase	99.92
PRK07775	274	short chain dehydrogenase; Provisional	99.92
PRK08267	260	short chain dehydrogenase; Provisional	99.92
PRK09242	257	tropinone reductase; Provisional	99.92
PRK06138	252	short chain dehydrogenase; Provisional	99.92
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.92
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
PRK09186	256	flagellin modification protein A; Provisional	99.92
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.92
PRK12743	256	oxidoreductase; Provisional	99.92
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.92
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK07831	262	short chain dehydrogenase; Provisional	99.92
PRK08628	258	short chain dehydrogenase; Provisional	99.92
PRK05855	582	short chain dehydrogenase; Validated	99.92
PRK09134	258	short chain dehydrogenase; Provisional	99.92
PRK06701	290	short chain dehydrogenase; Provisional	99.92
PRK12746	254	short chain dehydrogenase; Provisional	99.92
PRK09291	257	short chain dehydrogenase; Provisional	99.92
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.92
PRK06483	236	dihydromonapterin reductase; Provisional	99.92
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
PRK06125	259	short chain dehydrogenase; Provisional	99.92
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.92
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.92
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.92
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.92
PRK06914	280	short chain dehydrogenase; Provisional	99.92
PRK07774	250	short chain dehydrogenase; Provisional	99.92
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.92
PRK05693	274	short chain dehydrogenase; Provisional	99.92
PRK08251	248	short chain dehydrogenase; Provisional	99.92
PRK05875	276	short chain dehydrogenase; Provisional	99.92
PRK12827	249	short chain dehydrogenase; Provisional	99.91
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.91
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.91
PRK07677	252	short chain dehydrogenase; Provisional	99.91
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.91
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.91
PRK07814	263	short chain dehydrogenase; Provisional	99.91
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.91
PRK06101	240	short chain dehydrogenase; Provisional	99.91
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.91
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.91
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.91
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.91
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.91
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK07067	257	sorbitol dehydrogenase; Provisional	99.91
PRK12939	250	short chain dehydrogenase; Provisional	99.91
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK07856	252	short chain dehydrogenase; Provisional	99.91
PRK12937	245	short chain dehydrogenase; Provisional	99.91
PRK06181	263	short chain dehydrogenase; Provisional	99.91
PRK07102	243	short chain dehydrogenase; Provisional	99.91
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.91
PRK06949	258	short chain dehydrogenase; Provisional	99.91
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.91
PRK06500	249	short chain dehydrogenase; Provisional	99.91
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.91
PRK08226	263	short chain dehydrogenase; Provisional	99.91
PRK06841	255	short chain dehydrogenase; Provisional	99.91
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK07576	264	short chain dehydrogenase; Provisional	99.91
PRK12742	237	oxidoreductase; Provisional	99.91
PRK09135	249	pteridine reductase; Provisional	99.91
PRK07201	657	short chain dehydrogenase; Provisional	99.91
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.91
PRK12744	257	short chain dehydrogenase; Provisional	99.91
PRK07069	251	short chain dehydrogenase; Validated	99.91
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.91
PRK10538	248	malonic semialdehyde reductase; Provisional	99.91
PRK07023	243	short chain dehydrogenase; Provisional	99.91
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.9
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.9
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.9
PRK06123	248	short chain dehydrogenase; Provisional	99.9
PRK06484	520	short chain dehydrogenase; Validated	99.9
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.9
PRK09072	263	short chain dehydrogenase; Provisional	99.9
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.9
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.9
PRK07577	234	short chain dehydrogenase; Provisional	99.9
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.9
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.9
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.9
PRK12828	239	short chain dehydrogenase; Provisional	99.9
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.9
PRK07832	272	short chain dehydrogenase; Provisional	99.9
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.9
PRK07806	248	short chain dehydrogenase; Provisional	99.9
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.9
PRK08264	238	short chain dehydrogenase; Validated	99.9
PRK06940	275	short chain dehydrogenase; Provisional	99.9
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.9
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PLN00015	308	protochlorophyllide reductase	99.9
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.9
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.89
PRK07060	245	short chain dehydrogenase; Provisional	99.89
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK06057	255	short chain dehydrogenase; Provisional	99.89
PRK06198	260	short chain dehydrogenase; Provisional	99.89
PRK08703	239	short chain dehydrogenase; Provisional	99.89
PRK07074	257	short chain dehydrogenase; Provisional	99.89
PRK06484	520	short chain dehydrogenase; Validated	99.89
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK12829	264	short chain dehydrogenase; Provisional	99.89
PRK07041	230	short chain dehydrogenase; Provisional	99.89
PRK08324	681	short chain dehydrogenase; Validated	99.89
PRK06924	251	short chain dehydrogenase; Provisional	99.89
PRK07326	237	short chain dehydrogenase; Provisional	99.89
PRK05884	223	short chain dehydrogenase; Provisional	99.89
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.89
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.89
PRK08177	225	short chain dehydrogenase; Provisional	99.89
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.88
PLN02996	491	fatty acyl-CoA reductase	99.88
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.88
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.88
PRK08017	256	oxidoreductase; Provisional	99.88
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.88
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.88
PRK07578	199	short chain dehydrogenase; Provisional	99.87
PRK12367	245	short chain dehydrogenase; Provisional	99.87
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.87
PRK06953	222	short chain dehydrogenase; Provisional	99.87
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.87
PRK07201	657	short chain dehydrogenase; Provisional	99.86
COG1028	251	FabG Dehydrogenases with different specificities (	99.86
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.86
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.86
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.86
PRK08219	227	short chain dehydrogenase; Provisional	99.86
PLN03209	576	translocon at the inner envelope of chloroplast su	99.86
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.86
PLN02778	298	3,5-epimerase/4-reductase	99.85
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.85
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.85
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.84
CHL00194	317	ycf39 Ycf39; Provisional	99.84
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.83
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.83
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.83
PLN02503	605	fatty acyl-CoA reductase 2	99.82
PLN00016	378	RNA-binding protein; Provisional	99.81
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.81
PRK05865	854	hypothetical protein; Provisional	99.8
PLN02260	668	probable rhamnose biosynthetic enzyme	99.79
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.77
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.77
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.76
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.76
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.75
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.7
PRK12320	699	hypothetical protein; Provisional	99.69
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.69
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.69
PRK06720	169	hypothetical protein; Provisional	99.64
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.58
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.56
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.54
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.53
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.52
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.47
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.47
KOG2774	366	consensus NAD dependent epimerase [General functio	99.45
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.42
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.28
COG2910	211	Putative NADH-flavin reductase [General function p	99.26
PTZ00325	321	malate dehydrogenase; Provisional	99.23
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.17
PRK08309	177	short chain dehydrogenase; Provisional	99.11
PLN00106	323	malate dehydrogenase	99.07
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.06
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.9
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.77
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.75
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.73
PRK09620	229	hypothetical protein; Provisional	98.71
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.7
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.67
KOG4288	283	consensus Predicted oxidoreductase [General functi	98.64
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.62
PRK05086	312	malate dehydrogenase; Provisional	98.58
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.51
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.51
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.47
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.41
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	98.33
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.31
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.3
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	98.23
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	98.18
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.14
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.13
PRK14982	340	acyl-ACP reductase; Provisional	98.08
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.06
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	97.99
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	97.99
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.94
PRK05442	326	malate dehydrogenase; Provisional	97.87
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.84
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.81
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	97.81
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.8
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.77
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.72
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.67
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	97.66
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.65
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.61
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.6
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.57
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.47
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.46
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.45
PRK06223	307	malate dehydrogenase; Reviewed	97.45
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.44
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.41
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	97.39
PTZ00117	319	malate dehydrogenase; Provisional	97.38
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.34
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.32
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.31
PLN02602	350	lactate dehydrogenase	97.3
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.27
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.27
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.26
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.22
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.21
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.2
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.18
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.17
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.16
COG3268	382	Uncharacterized conserved protein [Function unknow	97.15
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.15
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.14
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.12
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.06
PRK09496	453	trkA potassium transporter peripheral membrane com	97.04
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.03
PRK06849	389	hypothetical protein; Provisional	96.98
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	96.97
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.97
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	96.96
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.94
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.88
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.86
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.86
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.85
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.85
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.82
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.8
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.72
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	96.71
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.7
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.69
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.67
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.67
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.65
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	96.63
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.63
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	96.62
PRK08328	231	hypothetical protein; Provisional	96.62
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.6
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	96.58
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.55
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.53
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.52
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	96.49
PRK09496	453	trkA potassium transporter peripheral membrane com	96.48
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.48
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	96.47
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.47
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.45
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.43
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.43
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.41
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.41
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.39
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.38
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.37
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.37
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.37
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.34
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.31
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.31
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.3
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	96.27
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.25
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.23
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	96.23
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.22
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.21
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.17
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.17
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.16
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.06
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.06
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.05
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.05
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.03
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.02
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.9
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.89
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.86
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	95.85
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	95.84
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.82
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.81
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.78
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	95.75
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.75
PRK04148	134	hypothetical protein; Provisional	95.73
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.7
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	95.68
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	95.66
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.63
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	95.6
PRK08655	437	prephenate dehydrogenase; Provisional	95.57
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	95.56
PRK10669	558	putative cation:proton antiport protein; Provision	95.55
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.51
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	95.51
COG2130	340	Putative NADP-dependent oxidoreductases [General f	95.51
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.47
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	95.47
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.46
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.42
PLN00203	519	glutamyl-tRNA reductase	95.4
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.39
PRK00048	257	dihydrodipicolinate reductase; Provisional	95.38
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	95.37
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	95.36
PRK08223	287	hypothetical protein; Validated	95.36
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.34
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.33
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	95.3
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	95.21
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.18
PRK12767	326	carbamoyl phosphate synthase-like protein; Provisi	95.16
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	95.15
PLN02383	344	aspartate semialdehyde dehydrogenase	95.14
PRK07411	390	hypothetical protein; Validated	95.14
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.13
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.09
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	95.08
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.07
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.04
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	95.04
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	95.04
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.03
PTZ00354	334	alcohol dehydrogenase; Provisional	95.01
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	95.01
PLN02928	347	oxidoreductase family protein	94.99
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	94.97
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.94
TIGR03693	637	ocin_ThiF_like putative thiazole-containing bacter	94.94
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	94.9
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	94.84
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	94.83
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	94.82
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	94.81
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	94.81
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	94.81
PRK14852	989	hypothetical protein; Provisional	94.76
PLN02740	381	Alcohol dehydrogenase-like	94.75
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.74
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	94.73
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.72
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	94.72
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	94.71
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	94.71
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	94.68

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.2e-33  Score=235.46  Aligned_cols=180  Identities=48%  Similarity=0.732  Sum_probs=165.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      ++||||||+|+||+|++.+|++.|++|+++|+...+..+.....        ...++++|+.|.+.+++++++.++|.||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~--------~~~f~~gDi~D~~~L~~vf~~~~idaVi   72 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL--------QFKFYEGDLLDRALLTAVFEENKIDAVV   72 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc--------cCceEEeccccHHHHHHHHHhcCCCEEE
Confidence            57999999999999999999999999999998665544333211        1678999999999999999999999999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (267)
                      |.||....+++...|.++++.|+.+|..+++.|.+.+.++|||.||+++||.+...|++|+.|..|.++||.||...|++
T Consensus        73 HFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~i  152 (329)
T COG1087          73 HFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEI  152 (329)
T ss_pred             ECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHH
Confidence            99999888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCcEEEEeccccccccceeecCCCCCC
Q 024488          231 ILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTDR  265 (267)
Q Consensus       231 ~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~~  265 (267)
                      ++.+++.++++.+++|.+       |+.|..++|+
T Consensus       153 L~d~~~a~~~~~v~LRYF-------N~aGA~~~G~  180 (329)
T COG1087         153 LRDAAKANPFKVVILRYF-------NVAGACPDGT  180 (329)
T ss_pred             HHHHHHhCCCcEEEEEec-------ccccCCCCCc
Confidence            999999999999999999       9988766653

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.97  E-value=8.1e-31  Score=219.35  Aligned_cols=175  Identities=19%  Similarity=0.184  Sum_probs=145.7

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      .+++++|||||+|||.++|++|+++|++|+++.|+....+++.+.+++.  .+.+++++++|+++++++..+.++     
T Consensus         5 ~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~--~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           5 KGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDK--TGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHh--hCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            3489999999999999999999999999999997555444444444432  245789999999999999988765     


Q ss_pred             CCCCEEEEccccCCcCCCc----cChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGEST----LDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ..+|+||||||.....+..    +..++.++.|+.+    |+.++|.|.+++.|+||+++|.+.+           .|.+
T Consensus        83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~-----------~p~p  151 (265)
T COG0300          83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGL-----------IPTP  151 (265)
T ss_pred             CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhc-----------CCCc
Confidence            4799999999997766433    3444566677666    7779999999999999999999998           3677


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccce
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVAF  256 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~~  256 (267)
                      ..+.|++||+++-.|.++++.|   .|++|..|.||.+.|.+..
T Consensus       152 ~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~  195 (265)
T COG0300         152 YMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD  195 (265)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc
Confidence            7899999999999999999999   6899999999999997654

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.97  E-value=3.8e-30  Score=228.11  Aligned_cols=185  Identities=26%  Similarity=0.320  Sum_probs=153.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhh-hhcCC-CCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVL-QELFP-EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      +|+||||||+|+||++|+++|+++|++|++++|............ ..... ...++.++.+|++|.+++.++++  ++|
T Consensus        15 ~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~--~~d   92 (348)
T PRK15181         15 PKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK--NVD   92 (348)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh--CCC
Confidence            489999999999999999999999999999997543322211111 11100 11357889999999999999988  799


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (267)
                      +|||+|+.........++...++.|+.++.++++++++.+.+++|++||.++||.....+..|+.+..|.+.|+.||.++
T Consensus        93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~  172 (348)
T PRK15181         93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVN  172 (348)
T ss_pred             EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHH
Confidence            99999997655445567788899999999999999999988999999999999976666677777777889999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          228 EDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       228 e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      |.+++.++++++++++++||+       ++|||++.
T Consensus       173 e~~~~~~~~~~~~~~~~lR~~-------~vyGp~~~  201 (348)
T PRK15181        173 ELYADVFARSYEFNAIGLRYF-------NVFGRRQN  201 (348)
T ss_pred             HHHHHHHHHHhCCCEEEEEec-------ceeCcCCC
Confidence            999999988899999999999       99999864

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=3.5e-30  Score=217.10  Aligned_cols=174  Identities=19%  Similarity=0.188  Sum_probs=143.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+|+|||||+|||.++|.+|+++|++++++.|..+..+.+.+.+++..+.. ++..+++|++|.++++++++.     +
T Consensus        12 ~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~-~v~~~~~Dvs~~~~~~~~~~~~~~~fg   90 (282)
T KOG1205|consen   12 GKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLE-KVLVLQLDVSDEESVKKFVEWAIRHFG   90 (282)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcC-ccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence            3999999999999999999999999999999988888777766666665443 699999999999999999855     8


Q ss_pred             CCCEEEEccccCCcCCCccCh----HHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+......+...    ...+++|+.|    |+.++|.|++++.|+||.+||.+++           .+.+.
T Consensus        91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~-----------~~~P~  159 (282)
T KOG1205|consen   91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK-----------MPLPF  159 (282)
T ss_pred             CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc-----------cCCCc
Confidence            999999999998743333222    2356677777    7889999999998999999998887           35666


Q ss_pred             CChHHHHHHHHHHHHHHhhhcC---CCcEE-EEeccccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKNS---DMAVM-ILRLVVFFTLVA  255 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e~---g~~~~-~vrp~~v~~~~~  255 (267)
                      ...|++||+|++.|.++++.|.   +..+. +|.||+|-|++.
T Consensus       160 ~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~~  202 (282)
T KOG1205|consen  160 RSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETEFT  202 (282)
T ss_pred             ccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeeccc
Confidence            6799999999999999999993   22222 599999999754

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.97  E-value=1.9e-29  Score=205.66  Aligned_cols=175  Identities=18%  Similarity=0.157  Sum_probs=140.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+++|||||+|||.++|+.|++.|++|++++|+.   +++.+...++.+  ..+..+..|++|.++++.+++.     ++
T Consensus         7 kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~---drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~g~   81 (246)
T COG4221           7 KVALITGASSGIGEATARALAEAGAKVVLAARRE---ERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEFGR   81 (246)
T ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEeccH---HHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhhCc
Confidence            8999999999999999999999999999999644   344444444422  5788999999999998887775     78


Q ss_pred             CCEEEEccccCCcCCCccChHH----HHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~----~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|+||||||.+...+..+...+    .++.|+.+    ++.+||.|.+++.|.||++||.+..           .+++..
T Consensus        82 iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~-----------~~y~~~  150 (246)
T COG4221          82 IDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGR-----------YPYPGG  150 (246)
T ss_pred             ccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccc-----------ccCCCC
Confidence            9999999999766554433333    44556555    6679999999999999999997765           377788


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccc-ccceeecCC
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFT-LVAFVIKIN  261 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~-~~~~~~Gp~  261 (267)
                      +.|++||+++.+|.+.++.|   .+++++.|.||.|-+ .++.+=.++
T Consensus       151 ~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g  198 (246)
T COG4221         151 AVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEG  198 (246)
T ss_pred             ccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCc
Confidence            99999999999999999998   589999999998854 455544443

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.97  E-value=1.8e-29  Score=212.41  Aligned_cols=187  Identities=52%  Similarity=0.801  Sum_probs=170.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      ++||||||+|+||+|++.+|+++||.|+++|+..+......+.++++...+..+.++++|++|.+.++++++...+|.|+
T Consensus         3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~   82 (343)
T KOG1371|consen    3 KHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVM   82 (343)
T ss_pred             cEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEE
Confidence            79999999999999999999999999999998766655555556666555678999999999999999999998999999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC-CCChHHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAED  229 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~-~~~~Y~~sK~a~e~  229 (267)
                      |.|+....+.+.++|..++..|+.++.++++.|++.+.+.+|+.||+.+||.+...|++|+.+.. |.++|+.+|.+.|.
T Consensus        83 Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~  162 (343)
T KOG1371|consen   83 HFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIEE  162 (343)
T ss_pred             eehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHHH
Confidence            99999888888889999999999999999999999999999999999999999999999999988 99999999999999


Q ss_pred             HHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          230 IILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       230 l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      ....+...++..++.||.+       |++|.-++|
T Consensus       163 i~~d~~~~~~~~~~~LRyf-------n~~ga~p~G  190 (343)
T KOG1371|consen  163 IIHDYNKAYGWKVTGLRYF-------NVIGAHPSG  190 (343)
T ss_pred             HHHhhhccccceEEEEEec-------cccCccccC
Confidence            9999999888999999999       888844443

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.97  E-value=4.2e-29  Score=207.46  Aligned_cols=187  Identities=27%  Similarity=0.392  Sum_probs=161.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      |++|||||+||||++.++.++++.  .+|+.+|...-  ....+.+..+ ...++..|+++|++|.+.+.+++++.++|+
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTY--Agn~~~l~~~-~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~   77 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTY--AGNLENLADV-EDSPRYRFVQGDICDRELVDRLFKEYQPDA   77 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccc--cCCHHHHHhh-hcCCCceEEeccccCHHHHHHHHHhcCCCe
Confidence            579999999999999999999885  45788875321  1122233333 224589999999999999999999888999


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEEeccccccCCCCC--CCCCCCCCCCCChHHHHHH
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSSTCATYGEPEKM--PITEETPQAPINPYGKAKK  225 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~vSS~~~~g~~~~~--~~~e~~~~~~~~~Y~~sK~  225 (267)
                      |+|.|+-++...+...|+.++++|+.||..+|+++++...+ |++++|+-.+||.....  .++|.+|..|.++|++||+
T Consensus        78 VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKA  157 (340)
T COG1088          78 VVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKA  157 (340)
T ss_pred             EEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhh
Confidence            99999999988889999999999999999999999998864 99999999999976543  6999999999999999999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCCCCC
Q 024488          226 MAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTDRRL  267 (267)
Q Consensus       226 a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~~~~  267 (267)
                      ++..++++|.+.+|+++++.|++       |-|||.+-++.|
T Consensus       158 asD~lVray~~TYglp~~ItrcS-------NNYGPyqfpEKl  192 (340)
T COG1088         158 ASDLLVRAYVRTYGLPATITRCS-------NNYGPYQFPEKL  192 (340)
T ss_pred             hHHHHHHHHHHHcCCceEEecCC-------CCcCCCcCchhh
Confidence            99999999999999999999999       999999877653

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=1.1e-28  Score=206.41  Aligned_cols=172  Identities=17%  Similarity=0.151  Sum_probs=142.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      ..+++||||||++|||+++|.+|+++|++++++|.+....+   +..++.... +++..+.||++|.+++.+..++    
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~---etv~~~~~~-g~~~~y~cdis~~eei~~~a~~Vk~e  111 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNE---ETVKEIRKI-GEAKAYTCDISDREEIYRLAKKVKKE  111 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchH---HHHHHHHhc-CceeEEEecCCCHHHHHHHHHHHHHh
Confidence            33499999999999999999999999999999996555444   444444333 3899999999999999888876    


Q ss_pred             -CCCCEEEEccccCCcCCCccChHHHHHH----hHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYVGESTLDPLKYYHN----ITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~~~~~~~~~~~~~----~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                       +.+|+||||||+....+..+.+++.++.    |..+    ++.++|.|.+.+.|+||+++|++++           .+.
T Consensus       112 ~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~-----------~g~  180 (300)
T KOG1201|consen  112 VGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGL-----------FGP  180 (300)
T ss_pred             cCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcc-----------cCC
Confidence             8999999999998777666655555544    4443    7889999999999999999998887           356


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc------CCCcEEEEecccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN------SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e------~g~~~~~vrp~~v~~~~  254 (267)
                      +....|++||+|+.++.+++..|      .|++.+.+.|+.+.|..
T Consensus       181 ~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgm  226 (300)
T KOG1201|consen  181 AGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGM  226 (300)
T ss_pred             ccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccc
Confidence            66889999999999999999877      57999999999888744

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.96  E-value=2.8e-28  Score=215.73  Aligned_cols=185  Identities=24%  Similarity=0.234  Sum_probs=150.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCC--cchhhhhhhcC-CCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN--IGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      |+||||||+||||++++++|+++|++|++++|.....  +......++.. ..+..++++.+|++|.+++.++++..++|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            6899999999999999999999999999999754321  11111111110 01235889999999999999999866689


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC---CEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV---DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAK  224 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK  224 (267)
                      +|||+|+..........+...++.|+.++.++++++.+.+.   .++|++||.++||.....+++|+.+..|.+.|+.||
T Consensus        81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK  160 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAK  160 (343)
T ss_pred             EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHH
Confidence            99999997654444455667778899999999999998764   389999999999976666788998888999999999


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCC
Q 024488          225 KMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       225 ~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      .++|.+++.++++++++++..|+.       ++|||+.
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~-------~~~gp~~  191 (343)
T TIGR01472       161 LYAHWITVNYREAYGLFAVNGILF-------NHESPRR  191 (343)
T ss_pred             HHHHHHHHHHHHHhCCceEEEeec-------ccCCCCC
Confidence            999999999998899999999998       8899874

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.96  E-value=2.7e-28  Score=222.17  Aligned_cols=189  Identities=26%  Similarity=0.314  Sum_probs=144.1

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcch-------------hhhhhhcC-CCCCceEEEEccCCC
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGA-------------VKVLQELF-PEPGRLQFIYADLGD  133 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~-------------~~~~~~~~-~~~~~~~~~~~Dl~d  133 (267)
                      ..+|+||||||+||||++|+++|+++|++|+++++..+.....             .+.++... ....+++++.+|++|
T Consensus        45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d  124 (442)
T PLN02572         45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICD  124 (442)
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCC
Confidence            3458999999999999999999999999999998643321110             01111110 012358899999999


Q ss_pred             HHHHHHHhhcCCCCEEEEccccCCcCCCccC---hHHHHHHhHHHHHHHHHHHHHcCCC-EEEEEeccccccCCCCCCCC
Q 024488          134 AKAVNKFFSENAFDAVMHFAAVAYVGESTLD---PLKYYHNITSNTLVVLESMARHGVD-TLIYSSTCATYGEPEKMPIT  209 (267)
Q Consensus       134 ~~~v~~~~~~~~~D~li~~Ag~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~vSS~~~~g~~~~~~~~  209 (267)
                      .+++.++++..++|+|||+|+.........+   .+..++.|+.++.++++.+++.+.+ +||++||.++||... .+++
T Consensus       125 ~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~-~~~~  203 (442)
T PLN02572        125 FEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN-IDIE  203 (442)
T ss_pred             HHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC-CCCc
Confidence            9999999987679999999976433222222   2445688999999999999988764 899999999998542 1222


Q ss_pred             C-----------C---CCCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          210 E-----------E---TPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       210 e-----------~---~~~~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      |           +   .+..|.+.|+.||.++|.+++.+++++|++++++||+       ++|||++..
T Consensus       204 E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~-------~vyGp~~~~  265 (442)
T PLN02572        204 EGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQG-------VVYGVRTDE  265 (442)
T ss_pred             ccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecc-------cccCCCCcc
Confidence            2           2   2456678999999999999999999899999999999       999998643

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.96  E-value=3e-28  Score=216.02  Aligned_cols=181  Identities=25%  Similarity=0.295  Sum_probs=149.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||+||||++++++|+++|++|++++|.........+.+    ....++.++.+|++|.+++.++++..++|+||
T Consensus         5 k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi   80 (349)
T TIGR02622         5 KKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELL----NLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVF   80 (349)
T ss_pred             CEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHH----hhcCCceEEEccCCCHHHHHHHHhhcCCCEEE
Confidence            89999999999999999999999999999997543322211111    11235778899999999999999876789999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEEeccccccCCC-CCCCCCCCCCCCCChHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPE-KMPITEETPQAPINPYGKAKKMAE  228 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~iV~vSS~~~~g~~~-~~~~~e~~~~~~~~~Y~~sK~a~e  228 (267)
                      |+||.........++...++.|+.++.++++++.+.+ .++||++||..+|+... ..+++|+.+..|.+.|+.||.+.|
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e  160 (349)
T TIGR02622        81 HLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAE  160 (349)
T ss_pred             ECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHH
Confidence            9999755445556778889999999999999998766 67999999999998643 245778888888999999999999


Q ss_pred             HHHHHhhhcC-------CCcEEEEeccccccccceeecCCC
Q 024488          229 DIILDFSKNS-------DMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       229 ~l~~~~a~e~-------g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      .+++.+++++       +++++++||+       ++|||++
T Consensus       161 ~~~~~~~~~~~~~~~~~~i~~~~lR~~-------~vyGp~~  194 (349)
T TIGR02622       161 LVIASYRSSFFGVANFHGIKIASARAG-------NVIGGGD  194 (349)
T ss_pred             HHHHHHHHHhhcccccCCCcEEEEccC-------cccCCCc
Confidence            9999988764       8999999999       9999975

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.96  E-value=6.3e-28  Score=211.81  Aligned_cols=184  Identities=23%  Similarity=0.254  Sum_probs=145.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||+||||++++++|+++|++|+++.|+....+...... .......++.++.+|++|.++++++++  ++|+||
T Consensus         6 k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi   82 (325)
T PLN02989          6 KVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLL-ALDGAKERLKLFKADLLDEGSFELAID--GCETVF   82 (325)
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHH-hccCCCCceEEEeCCCCCchHHHHHHc--CCCEEE
Confidence            89999999999999999999999999998886543322221111 111112468899999999999999998  799999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEEeccccccCC-----CCCCCCCCCCCCC------CC
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYGEP-----EKMPITEETPQAP------IN  218 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~iV~vSS~~~~g~~-----~~~~~~e~~~~~~------~~  218 (267)
                      ||||........+.+.+.++.|+.++.++++++.+. +.++||++||.++|+..     ...+++|+.+..|      .+
T Consensus        83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~  162 (325)
T PLN02989         83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQ  162 (325)
T ss_pred             EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhccccc
Confidence            999975433333455677899999999999999875 46799999998877532     2335677766544      36


Q ss_pred             hHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          219 PYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       219 ~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      .|+.||.++|.+++.++++++++++++||+       ++|||++..
T Consensus       163 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~-------~vyGp~~~~  201 (325)
T PLN02989        163 WYVLSKTLAEDAAWRFAKDNEIDLIVLNPG-------LVTGPILQP  201 (325)
T ss_pred             chHHHHHHHHHHHHHHHHHcCCeEEEEcCC-------ceeCCCCCC
Confidence            899999999999999998899999999999       999998653

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.96  E-value=4.6e-28  Score=215.16  Aligned_cols=184  Identities=24%  Similarity=0.342  Sum_probs=147.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEE-EecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTI-VDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      ||+||||||+||||++++++|+++|+++++ +++... .... ..+.... ...++.++.+|++|.++++++++..++|+
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~-~~~~-~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~   77 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTY-AGNL-MSLAPVA-QSERFAFEKVDICDRAELARVFTEHQPDC   77 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCcc-ccch-hhhhhcc-cCCceEEEECCCcChHHHHHHHhhcCCCE
Confidence            589999999999999999999999987554 443211 1111 1111111 12367889999999999999998667999


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHc---------CCCEEEEEeccccccCCC--CCCCCCCCCCCCC
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH---------GVDTLIYSSTCATYGEPE--KMPITEETPQAPI  217 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~iV~vSS~~~~g~~~--~~~~~e~~~~~~~  217 (267)
                      |||+||........+.+++.++.|+.++.++++++.+.         +.+++|++||.++||...  ..+++|+.+..+.
T Consensus        78 Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~  157 (355)
T PRK10217         78 VMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPS  157 (355)
T ss_pred             EEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCC
Confidence            99999976443344567788999999999999999762         356999999999998542  3468888888889


Q ss_pred             ChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          218 NPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      +.|+.||.++|.+++.++++++++++++||+       ++|||+..
T Consensus       158 s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~-------~v~Gp~~~  196 (355)
T PRK10217        158 SPYSASKASSDHLVRAWLRTYGLPTLITNCS-------NNYGPYHF  196 (355)
T ss_pred             ChhHHHHHHHHHHHHHHHHHhCCCeEEEeee-------eeeCCCCC
Confidence            9999999999999999998899999999999       99999864

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.96  E-value=5.6e-28  Score=213.49  Aligned_cols=186  Identities=23%  Similarity=0.260  Sum_probs=150.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCC--cchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN--IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      +|+||||||+||||++++++|+++|++|++++|.....  ..+.....+....+.++.++.+|++|.+++.++++..++|
T Consensus         6 ~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   85 (340)
T PLN02653          6 RKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKPD   85 (340)
T ss_pred             CCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCCC
Confidence            48999999999999999999999999999998754321  1111111111111346889999999999999999866689


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCC-----EEEEEeccccccCCCCCCCCCCCCCCCCChHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-----TLIYSSTCATYGEPEKMPITEETPQAPINPYGK  222 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~  222 (267)
                      +|||+|+..........+...++.|+.++.++++++.+.+..     ++|++||.++||.... +++|+.+..|.+.|+.
T Consensus        86 ~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~~p~~~Y~~  164 (340)
T PLN02653         86 EVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPFHPRSPYAV  164 (340)
T ss_pred             EEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCCCCCChhHH
Confidence            999999986544444566777889999999999999887654     8999999999987654 7889999889999999


Q ss_pred             HHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          223 AKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       223 sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      ||.++|.+++.+++++++.++..|+.       ++|||+..
T Consensus       165 sK~~~e~~~~~~~~~~~~~~~~~~~~-------~~~gp~~~  198 (340)
T PLN02653        165 AKVAAHWYTVNYREAYGLFACNGILF-------NHESPRRG  198 (340)
T ss_pred             HHHHHHHHHHHHHHHcCCeEEEeeec-------cccCCCCC
Confidence            99999999999999999988888988       89998653

>PLN02214 cinnamoyl-CoA reductase

Probab=99.96  E-value=2.1e-27  Score=210.12  Aligned_cols=178  Identities=26%  Similarity=0.294  Sum_probs=144.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|+|+||||+|+||++++++|+++|++|++++|+......  ..+.++.....+++++.+|++|.+++.++++  ++|+|
T Consensus        10 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~V   85 (342)
T PLN02214         10 GKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKN--THLRELEGGKERLILCKADLQDYEALKAAID--GCDGV   85 (342)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhH--HHHHHhhCCCCcEEEEecCcCChHHHHHHHh--cCCEE
Confidence            4899999999999999999999999999999975432111  1112221112358889999999999999998  79999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEecc-ccccCCCC---CCCCCCC------CCCCCCh
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTC-ATYGEPEK---MPITEET------PQAPINP  219 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~-~~~g~~~~---~~~~e~~------~~~~~~~  219 (267)
                      ||+|+..     ..++.+.++.|+.++.++++++.+.+.++||++||. ++||....   .+++|+.      +..+.+.
T Consensus        86 ih~A~~~-----~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~  160 (342)
T PLN02214         86 FHTASPV-----TDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNW  160 (342)
T ss_pred             EEecCCC-----CCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccH
Confidence            9999864     235678889999999999999999888899999996 58875332   2467764      3345678


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          220 YGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       220 Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      |+.||.++|.+++.++++++++++++||+       ++|||+..
T Consensus       161 Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~-------~vyGp~~~  197 (342)
T PLN02214        161 YCYGKMVAEQAAWETAKEKGVDLVVLNPV-------LVLGPPLQ  197 (342)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEeCC-------ceECCCCC
Confidence            99999999999999998899999999999       99999864

>PLN02240 UDP-glucose 4-epimerase

Probab=99.96  E-value=1.9e-27  Score=210.95  Aligned_cols=184  Identities=41%  Similarity=0.703  Sum_probs=151.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcC-CCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      |+|+||||+|+||++++++|+++|++|++++|..+......+.+.+.. ..+.++.++.+|++|.+++.++++..++|+|
T Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d~v   85 (352)
T PLN02240          6 RTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFDAV   85 (352)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCCEE
Confidence            899999999999999999999999999999864432222112222211 1134678899999999999999876679999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (267)
                      ||+|+..........+...++.|+.++.++++++.+.+.++||++||.++|+.....+++|+.+..+.+.|+.||.++|.
T Consensus        86 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  165 (352)
T PLN02240         86 IHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEE  165 (352)
T ss_pred             EEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            99999754444455778889999999999999999888889999999999987767789999999999999999999999


Q ss_pred             HHHHhhhc-CCCcEEEEeccccccccceeecCC
Q 024488          230 IILDFSKN-SDMAVMILRLVVFFTLVAFVIKIN  261 (267)
Q Consensus       230 l~~~~a~e-~g~~~~~vrp~~v~~~~~~~~Gp~  261 (267)
                      +++.++.+ .+++++++|++       ++|||+
T Consensus       166 ~~~~~~~~~~~~~~~~~R~~-------~v~G~~  191 (352)
T PLN02240        166 ICRDIHASDPEWKIILLRYF-------NPVGAH  191 (352)
T ss_pred             HHHHHHHhcCCCCEEEEeec-------CcCCCC
Confidence            99998765 68999999999       666654

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.96  E-value=2.3e-27  Score=210.23  Aligned_cols=176  Identities=20%  Similarity=0.336  Sum_probs=143.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCC-CHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG-DAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~v~~~~~~~~~D  147 (267)
                      ||+||||||+|+||++++++|+++ |++|++++|+...   .    ..... ...++++.+|++ +.+.+.++++  ++|
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~---~----~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~--~~d   70 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDR---L----GDLVN-HPRMHFFEGDITINKEWIEYHVK--KCD   70 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHH---H----HHhcc-CCCeEEEeCCCCCCHHHHHHHHc--CCC
Confidence            578999999999999999999986 7999999864321   1    11111 235889999998 7778888877  799


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC-------CCCChH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-------APINPY  220 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~-------~~~~~Y  220 (267)
                      +|||+|+...+.....+++..++.|+.+++++++++++.+ +++|++||..+||.....+++|+.+.       .+.+.|
T Consensus        71 ~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y  149 (347)
T PRK11908         71 VILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIY  149 (347)
T ss_pred             EEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchH
Confidence            9999999765555566778889999999999999999876 79999999999986554556655421       356689


Q ss_pred             HHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          221 GKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       221 ~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      +.||.++|.+++.++.+++++++++||+       ++|||++.
T Consensus       150 ~~sK~~~e~~~~~~~~~~~~~~~ilR~~-------~v~Gp~~~  185 (347)
T PRK11908        150 ACSKQLMDRVIWAYGMEEGLNFTLFRPF-------NWIGPGLD  185 (347)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCeEEEeee-------eeeCCCcc
Confidence            9999999999999998899999999999       99999853

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.95  E-value=3.2e-27  Score=201.72  Aligned_cols=185  Identities=23%  Similarity=0.242  Sum_probs=152.0

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      ++++|+|||||||||++++++|+.+||+|+.+.|++.+ ++..+.+.++.....++..+..|+.|++++.++++  ++|.
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~-~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~--gcdg   81 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPED-EKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID--GCDG   81 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcch-hhhHHHHHhcccCcccceEEeccccccchHHHHHh--CCCE
Confidence            45899999999999999999999999999999987655 33334566665556679999999999999999999  8999


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEEeccccccCC-----CCCCCCCCCCCCC------
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEP-----EKMPITEETPQAP------  216 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~iV~vSS~~~~g~~-----~~~~~~e~~~~~~------  216 (267)
                      |+|.|....+.... ...+.++..+.|+.++++++++.. .+|||++||.++....     ....++|+...+.      
T Consensus        82 VfH~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~  160 (327)
T KOG1502|consen   82 VFHTASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCK  160 (327)
T ss_pred             EEEeCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhh
Confidence            99999976554333 344788999999999999999987 8999999997766422     2234566654322      


Q ss_pred             CChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          217 INPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      ...|+.||..+|..++.+++|.+++.+.+.|+       .|+||....
T Consensus       161 ~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~-------lV~GP~l~~  201 (327)
T KOG1502|consen  161 KLWYALSKTLAEKAAWEFAKENGLDLVTINPG-------LVFGPGLQP  201 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCccEEEecCC-------ceECCCccc
Confidence            35799999999999999999999999999999       889987543

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.95  E-value=7.5e-27  Score=205.97  Aligned_cols=180  Identities=37%  Similarity=0.644  Sum_probs=145.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+|+||||+|+||++++++|+++|++|++++|..+........+.+..  +.++.++.+|++|.+++.++++..++|+||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vv   78 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALLTEILHDHAIDTVI   78 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhc--CCCceEEEccCCCHHHHHHHHhcCCCCEEE
Confidence            479999999999999999999999999998864333222222222221  235678899999999999998866799999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC-CCCChHHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-APINPYGKAKKMAED  229 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~-~~~~~Y~~sK~a~e~  229 (267)
                      |+|+..........+.+.++.|+.++.++++.|++.+.++||++||.++||.....+++|+.+. .+.+.|+.+|.++|.
T Consensus        79 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~  158 (338)
T PRK10675         79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQ  158 (338)
T ss_pred             ECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHH
Confidence            9999765433445567788999999999999999988889999999999987666678888876 678999999999999


Q ss_pred             HHHHhhhc-CCCcEEEEecccccc
Q 024488          230 IILDFSKN-SDMAVMILRLVVFFT  252 (267)
Q Consensus       230 l~~~~a~e-~g~~~~~vrp~~v~~  252 (267)
                      +++.++++ .+++++++|++.+++
T Consensus       159 ~~~~~~~~~~~~~~~ilR~~~v~g  182 (338)
T PRK10675        159 ILTDLQKAQPDWSIALLRYFNPVG  182 (338)
T ss_pred             HHHHHHHhcCCCcEEEEEeeeecC
Confidence            99999876 489999999993333

>PLN02427 UDP-apiose/xylose synthase

Probab=99.95  E-value=5.1e-27  Score=210.87  Aligned_cols=178  Identities=22%  Similarity=0.305  Sum_probs=139.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCCcchhhhhhhcC--CCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELF--PEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      |+||||||+||||++++++|+++ |++|++++|+.....   . +....  ....+++++.+|++|.+++.++++  ++|
T Consensus        15 ~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~---~-l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~--~~d   88 (386)
T PLN02427         15 LTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIK---H-LLEPDTVPWSGRIQFHRINIKHDSRLEGLIK--MAD   88 (386)
T ss_pred             cEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhh---h-hhccccccCCCCeEEEEcCCCChHHHHHHhh--cCC
Confidence            78999999999999999999998 599999986432211   1 11110  012368999999999999999988  689


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC-------------
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-------------  214 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~-------------  214 (267)
                      +|||+|+...+.....++.+.+..|+.++.++++++.+.+ ++||++||.++||.....+++|+.|.             
T Consensus        89 ~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~  167 (386)
T PLN02427         89 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDE  167 (386)
T ss_pred             EEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCcccccccccccccccccc
Confidence            9999999764433445566777889999999999998776 89999999999986433333332221             


Q ss_pred             ---------CCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCC
Q 024488          215 ---------APINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       215 ---------~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                               .+.+.|+.||.++|.++..++.+++++++++||+       ++|||++
T Consensus       168 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~-------~vyGp~~  217 (386)
T PLN02427        168 SPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPF-------NWIGPRM  217 (386)
T ss_pred             cccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEeccc-------ceeCCCC
Confidence                     2345799999999999999988889999999999       9999975

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.95  E-value=8.8e-27  Score=206.96  Aligned_cols=182  Identities=23%  Similarity=0.275  Sum_probs=140.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      .++||||||+|+||++++++|+++|++|++++|+...   ..+...... .+.+++++.+|++|.+++.++++  ++|+|
T Consensus        10 ~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~---~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~--~~d~V   83 (353)
T PLN02896         10 TGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAK---SLHLLSKWK-EGDRLRLFRADLQEEGSFDEAVK--GCDGV   83 (353)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHH---HHHHHHhhc-cCCeEEEEECCCCCHHHHHHHHc--CCCEE
Confidence            3899999999999999999999999999998864322   222222221 13468899999999999999987  78999


Q ss_pred             EEccccCCcCC--CccChHHHHHH-----hHHHHHHHHHHHHHcC-CCEEEEEeccccccCCCC-----CCCCCCCC---
Q 024488          150 MHFAAVAYVGE--STLDPLKYYHN-----ITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEK-----MPITEETP---  213 (267)
Q Consensus       150 i~~Ag~~~~~~--~~~~~~~~~~~-----~~~~~~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~-----~~~~e~~~---  213 (267)
                      ||+|+......  ...+++..++.     |+.++.++++.+.+.+ .++||++||.++||....     .+++|+.+   
T Consensus        84 ih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~  163 (353)
T PLN02896         84 FHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPI  163 (353)
T ss_pred             EECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcH
Confidence            99999754332  23344444444     4578999999998875 689999999999984321     34566522   


Q ss_pred             ------CCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          214 ------QAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       214 ------~~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                            .++.++|+.||.++|.+++.++++++++++++||+       ++|||+..+
T Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~-------~vyGp~~~~  213 (353)
T PLN02896        164 DHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITT-------TVAGPFLTP  213 (353)
T ss_pred             HHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCC-------cccCCCcCC
Confidence                  12445899999999999999999899999999999       999997643

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.95  E-value=8.3e-27  Score=205.87  Aligned_cols=181  Identities=22%  Similarity=0.291  Sum_probs=140.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +++||||||+||||++++++|+++|++|+++.|......... .+..+ ...++++++.+|++|.+++.++++  ++|+|
T Consensus         9 ~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~v   84 (338)
T PLN00198          9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIA-HLRAL-QELGDLKIFGADLTDEESFEAPIA--GCDLV   84 (338)
T ss_pred             CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH-HHHhc-CCCCceEEEEcCCCChHHHHHHHh--cCCEE
Confidence            489999999999999999999999999998886543221111 11111 111358889999999999999888  78999


Q ss_pred             EEccccCCcCCCccChH-HHHHHhHHHHHHHHHHHHHc-CCCEEEEEeccccccCCC----CCCCCCCC---------CC
Q 024488          150 MHFAAVAYVGESTLDPL-KYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYGEPE----KMPITEET---------PQ  214 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~-~~~~iV~vSS~~~~g~~~----~~~~~e~~---------~~  214 (267)
                      ||+|+...  ....++. ..++.|+.++.++++++.+. +.++||++||.++|+...    ..+++|+.         +.
T Consensus        85 ih~A~~~~--~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~  162 (338)
T PLN00198         85 FHVATPVN--FASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEK  162 (338)
T ss_pred             EEeCCCCc--cCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcC
Confidence            99998532  1122333 45789999999999999886 478999999999997431    23344432         23


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          215 APINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      +|.++|+.||.++|.+++.++++++++++++||+       ++|||++.
T Consensus       163 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~-------~vyGp~~~  204 (338)
T PLN00198        163 PPTWGYPASKTLAEKAAWKFAEENNIDLITVIPT-------LMAGPSLT  204 (338)
T ss_pred             CccchhHHHHHHHHHHHHHHHHhcCceEEEEeCC-------ceECCCcc
Confidence            5678899999999999999999899999999999       99999854

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.95  E-value=6.3e-27  Score=201.06  Aligned_cols=174  Identities=29%  Similarity=0.472  Sum_probs=138.0

Q ss_pred             EEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEE
Q 024488           74 LVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH  151 (267)
Q Consensus        74 lVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li~  151 (267)
                      |||||+||||++|+++|+++|  ++|.++++......  .+...+    .....++.+|++|.+++.++++  ++|+|||
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~----~~~~~~~~~Di~d~~~l~~a~~--g~d~V~H   72 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQK----SGVKEYIQGDITDPESLEEALE--GVDVVFH   72 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhc----ccceeEEEeccccHHHHHHHhc--CCceEEE
Confidence            699999999999999999999  79999886543321  111111    1233489999999999999999  8999999


Q ss_pred             ccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccC-CCCCC---CCCCCCCC--CCChHHHHHH
Q 024488          152 FAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGE-PEKMP---ITEETPQA--PINPYGKAKK  225 (267)
Q Consensus       152 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~-~~~~~---~~e~~~~~--~~~~Y~~sK~  225 (267)
                      +|+...... ....++.++.|+.||+++++++++.+.+++||+||.++++. ....+   .+|..+.+  +...|+.||+
T Consensus        73 ~Aa~~~~~~-~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~  151 (280)
T PF01073_consen   73 TAAPVPPWG-DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKA  151 (280)
T ss_pred             eCccccccC-cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHH
Confidence            999754322 45667899999999999999999999999999999999875 22222   34554433  5779999999


Q ss_pred             HHHHHHHHhhh---cC--CCcEEEEeccccccccceeecCCCC
Q 024488          226 MAEDIILDFSK---NS--DMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       226 a~e~l~~~~a~---e~--g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      .+|.++.....   +.  .++.++|||.       .+|||++.
T Consensus       152 ~AE~~V~~a~~~~~~~g~~l~t~~lRP~-------~IyGp~d~  187 (280)
T PF01073_consen  152 LAEKAVLEANGSELKNGGRLRTCALRPA-------GIYGPGDQ  187 (280)
T ss_pred             HHHHHHHhhcccccccccceeEEEEecc-------EEeCcccc
Confidence            99999999876   23  4899999999       99999864

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.95  E-value=1.3e-26  Score=201.38  Aligned_cols=159  Identities=18%  Similarity=0.211  Sum_probs=137.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||+|+||++++++|+++| +|++++|..                    ..+.+|++|.+.++++++..++|+||
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~--------------------~~~~~Dl~d~~~~~~~~~~~~~D~Vi   59 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHS--------------------TDYCGDFSNPEGVAETVRKIRPDVIV   59 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEecccc--------------------ccccCCCCCHHHHHHHHHhcCCCEEE
Confidence            479999999999999999999999 788887521                    12358999999999999866799999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (267)
                      |+|+.......+.+++..++.|..++.++++++.+.+ .++|++||..+|+.....|++|+.+..|.+.|+.||.++|.+
T Consensus        60 h~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~  138 (299)
T PRK09987         60 NAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG-AWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKA  138 (299)
T ss_pred             ECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC-CeEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHH
Confidence            9999876655666778888999999999999999887 489999999999877667899999999999999999999999


Q ss_pred             HHHhhhcCCCcEEEEeccccccccceeecCCC
Q 024488          231 ILDFSKNSDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       231 ~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      ++.+.    .+.+++||+       ++|||+.
T Consensus       139 ~~~~~----~~~~ilR~~-------~vyGp~~  159 (299)
T PRK09987        139 LQEHC----AKHLIFRTS-------WVYAGKG  159 (299)
T ss_pred             HHHhC----CCEEEEecc-------eecCCCC
Confidence            98864    356999999       9999874

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.95  E-value=2.2e-26  Score=204.21  Aligned_cols=183  Identities=26%  Similarity=0.382  Sum_probs=144.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      ++||||||+||||++++++|+++|++ |+.+++...  ....+.+..+. .+.+++++.+|++|.++++++++..++|+|
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTY--AGNLESLADVS-DSERYVFEHADICDRAELDRIFAQHQPDAV   77 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCc--cchHHHHHhcc-cCCceEEEEecCCCHHHHHHHHHhcCCCEE
Confidence            37999999999999999999999976 554554221  11111122221 124578899999999999999986679999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHc---------CCCEEEEEeccccccCCC---------C-CCCCC
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH---------GVDTLIYSSTCATYGEPE---------K-MPITE  210 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~iV~vSS~~~~g~~~---------~-~~~~e  210 (267)
                      ||+||..........+++.++.|+.++.++++.+.+.         +.+++|++||.++|+...         . .+++|
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E  157 (352)
T PRK10084         78 MHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTE  157 (352)
T ss_pred             EECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccc
Confidence            9999975443334566788999999999999999864         346899999999998531         1 23678


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      +.+..|.+.|+.||.++|.+++.++++++++++++||+       ++|||+..
T Consensus       158 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~-------~v~Gp~~~  203 (352)
T PRK10084        158 TTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCS-------NNYGPYHF  203 (352)
T ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecc-------ceeCCCcC
Confidence            88888899999999999999999998899999999999       99999853

>PLN02650 dihydroflavonol-4-reductase

Probab=99.95  E-value=2.8e-26  Score=203.52  Aligned_cols=182  Identities=20%  Similarity=0.241  Sum_probs=139.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||+||||++++++|+++|++|++++|+........... .......++.++.+|++|.+.++++++  ++|+||
T Consensus         6 k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~v~~Dl~d~~~~~~~~~--~~d~Vi   82 (351)
T PLN02650          6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLL-DLPGATTRLTLWKADLAVEGSFDDAIR--GCTGVF   82 (351)
T ss_pred             CEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHH-hccCCCCceEEEEecCCChhhHHHHHh--CCCEEE
Confidence            79999999999999999999999999999987543322221111 111112357889999999999999988  789999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEEeccccccCC-CCCC-CCCCCC---------CCCCC
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEP-EKMP-ITEETP---------QAPIN  218 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~iV~vSS~~~~g~~-~~~~-~~e~~~---------~~~~~  218 (267)
                      |+|+..... ..+...+.++.|+.++.++++++.+.+ .++||++||.++|+.. ...+ ++|+..         ..+.+
T Consensus        83 H~A~~~~~~-~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  161 (351)
T PLN02650         83 HVATPMDFE-SKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGW  161 (351)
T ss_pred             EeCCCCCCC-CCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccc
Confidence            999864321 112224678899999999999999876 6799999998777543 2223 355431         12346


Q ss_pred             hHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          219 PYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       219 ~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      .|+.||.++|.+++.++++++++++++||+       ++|||++.
T Consensus       162 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~-------~v~Gp~~~  199 (351)
T PLN02650        162 MYFVSKTLAEKAAWKYAAENGLDFISIIPT-------LVVGPFIS  199 (351)
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCeEEEECCC-------ceECCCCC
Confidence            899999999999999999899999999999       99999754

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.95  E-value=2.7e-26  Score=201.28  Aligned_cols=182  Identities=23%  Similarity=0.260  Sum_probs=140.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+|+||||+|+||++++++|+++|++|+++.|+....+...+.. ........++++.+|++|.+++.++++  ++|+||
T Consensus         6 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi   82 (322)
T PLN02986          6 KLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLL-ALDGAKERLKLFKADLLEESSFEQAIE--GCDAVF   82 (322)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHH-hccCCCCceEEEecCCCCcchHHHHHh--CCCEEE
Confidence            89999999999999999999999999998887544322222111 111112468899999999999999998  799999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEEeccccc--cCC---CCCCCCCCCCCC------CCC
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATY--GEP---EKMPITEETPQA------PIN  218 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~iV~vSS~~~~--g~~---~~~~~~e~~~~~------~~~  218 (267)
                      |+|+..... ..+...+.++.|+.++.++++.+.+. +.++||++||.++|  +..   ...+++|+.+..      +.+
T Consensus        83 h~A~~~~~~-~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~  161 (322)
T PLN02986         83 HTASPVFFT-VKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKN  161 (322)
T ss_pred             EeCCCcCCC-CCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhcccc
Confidence            999964321 11222346788999999999999885 57899999998764  322   123466665432      357


Q ss_pred             hHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          219 PYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       219 ~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      .|+.||.++|.+++.+.++++++++++||+       ++|||+..
T Consensus       162 ~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~-------~v~Gp~~~  199 (322)
T PLN02986        162 WYPLSKILAENAAWEFAKDNGIDMVVLNPG-------FICGPLLQ  199 (322)
T ss_pred             chHHHHHHHHHHHHHHHHHhCCeEEEEccc-------ceeCCCCC
Confidence            899999999999999998899999999999       99998754

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.7e-26  Score=197.01  Aligned_cols=172  Identities=16%  Similarity=0.119  Sum_probs=133.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~  145 (267)
                      +|+++||||++|||++++++|+++|++|++++|+..+.++..+.+++.  .+.++.++.+|++|++++++++++    ++
T Consensus         8 ~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~   85 (263)
T PRK08339          8 GKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSE--SNVDVSYIVADLTKREDLERTVKELKNIGE   85 (263)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh--cCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence            499999999999999999999999999999997543322222222221  134688999999999999988875    67


Q ss_pred             CCEEEEccccCCcCCCccChHH----HHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~----~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|++|||||........+.+.+    .++.|+.+    ++.++|.|.+++.++||++||.+.+.           +.+..
T Consensus        86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~-----------~~~~~  154 (263)
T PRK08339         86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKE-----------PIPNI  154 (263)
T ss_pred             CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccC-----------CCCcc
Confidence            9999999997654443333333    34445443    66788999888888999999987652           44557


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..|+++|++.+.+++.++.|   +|++++.|.||+|.|..
T Consensus       155 ~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~  194 (263)
T PRK08339        155 ALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDR  194 (263)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHH
Confidence            78999999999999999998   58999999999998854

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.95  E-value=8.8e-27  Score=194.89  Aligned_cols=174  Identities=32%  Similarity=0.526  Sum_probs=150.5

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEEc
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHF  152 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li~~  152 (267)
                      ||||||+|+||++++++|+++|+.|+.+.|+.........   +     .++.++.+|+.|.++++++++...+|+|||+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~---~-----~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~   72 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEK---K-----LNVEFVIGDLTDKEQLEKLLEKANIDVVIHL   72 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHH---H-----TTEEEEESETTSHHHHHHHHHHHTESEEEEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccc---c-----ceEEEEEeeccccccccccccccCceEEEEe
Confidence            7999999999999999999999999988864432211111   1     1688999999999999999987778999999


Q ss_pred             cccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 024488          153 AAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIIL  232 (267)
Q Consensus       153 Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~  232 (267)
                      |+............+.++.|+.++++++.++.+.+.+++|++||..+|+.....+++|+.+..+.+.|+.+|...|.+++
T Consensus        73 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~  152 (236)
T PF01370_consen   73 AAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLR  152 (236)
T ss_dssp             BSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHH
T ss_pred             eccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99753222235677888999999999999999999899999999999998877888999988999999999999999999


Q ss_pred             HhhhcCCCcEEEEeccccccccceeecCC
Q 024488          233 DFSKNSDMAVMILRLVVFFTLVAFVIKIN  261 (267)
Q Consensus       233 ~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~  261 (267)
                      .+.++++++++++||+       ++|||+
T Consensus       153 ~~~~~~~~~~~~~R~~-------~vyG~~  174 (236)
T PF01370_consen  153 DYAKKYGLRVTILRPP-------NVYGPG  174 (236)
T ss_dssp             HHHHHHTSEEEEEEES-------EEESTT
T ss_pred             cccccccccccccccc-------cccccc
Confidence            9998889999999999       999998

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.95  E-value=2.2e-26  Score=219.45  Aligned_cols=179  Identities=22%  Similarity=0.322  Sum_probs=145.8

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHH-HHHHhhcC
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKA-VNKFFSEN  144 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-v~~~~~~~  144 (267)
                      .+.+|+||||||+||||++++++|+++ ||+|++++|......       .... ..+++++.+|++|.++ ++++++  
T Consensus       312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~-------~~~~-~~~~~~~~gDl~d~~~~l~~~l~--  381 (660)
T PRK08125        312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAIS-------RFLG-HPRFHFVEGDISIHSEWIEYHIK--  381 (660)
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhh-------hhcC-CCceEEEeccccCcHHHHHHHhc--
Confidence            344689999999999999999999986 799999997442211       1111 2368889999998655 566776  


Q ss_pred             CCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC-------CCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-------API  217 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~-------~~~  217 (267)
                      ++|+|||+|+...+.....++++.++.|+.++.++++++.+.+ +++|++||.++||.....+++|+.+.       .+.
T Consensus       382 ~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~  460 (660)
T PRK08125        382 KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQR  460 (660)
T ss_pred             CCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCc
Confidence            7999999999866544556777889999999999999999887 79999999999987555567777643       245


Q ss_pred             ChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          218 NPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      +.|+.||.++|.+++.++++++++++++||+       ++|||++.
T Consensus       461 s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~-------~vyGp~~~  499 (660)
T PRK08125        461 WIYSVSKQLLDRVIWAYGEKEGLRFTLFRPF-------NWMGPRLD  499 (660)
T ss_pred             cchHHHHHHHHHHHHHHHHhcCCceEEEEEc-------eeeCCCcc
Confidence            6899999999999999998899999999999       99999753

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.95  E-value=3.9e-26  Score=200.03  Aligned_cols=181  Identities=24%  Similarity=0.283  Sum_probs=140.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||+||||++++++|+++|++|++++|+........ .+........+++++++|++|.+++.++++  ++|+||
T Consensus         5 ~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi   81 (322)
T PLN02662          5 KVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTE-HLLALDGAKERLHLFKANLLEEGSFDSVVD--GCEGVF   81 (322)
T ss_pred             CEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHH-HHHhccCCCCceEEEeccccCcchHHHHHc--CCCEEE
Confidence            89999999999999999999999999999987543221111 111111112468899999999999999998  789999


Q ss_pred             EccccCCcCCCccCh-HHHHHHhHHHHHHHHHHHHHc-CCCEEEEEecccc--ccCC---CCCCCCCCCCCCC------C
Q 024488          151 HFAAVAYVGESTLDP-LKYYHNITSNTLVVLESMARH-GVDTLIYSSTCAT--YGEP---EKMPITEETPQAP------I  217 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~-~~~~iV~vSS~~~--~g~~---~~~~~~e~~~~~~------~  217 (267)
                      |+|+....  ....+ +..++.|+.++.++++++.+. +.++||++||.+.  |+..   ...+++|+.+..+      .
T Consensus        82 h~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~  159 (322)
T PLN02662         82 HTASPFYH--DVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESK  159 (322)
T ss_pred             EeCCcccC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhccc
Confidence            99986432  22334 367889999999999999887 7789999999764  6432   2235677765443      3


Q ss_pred             ChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          218 NPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      +.|+.+|.++|.+++.+.++++++++++||+       ++|||+..
T Consensus       160 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~-------~v~Gp~~~  198 (322)
T PLN02662        160 LWYVLSKTLAEEAAWKFAKENGIDMVTINPA-------MVIGPLLQ  198 (322)
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCcEEEEeCC-------cccCCCCC
Confidence            5899999999999999998899999999999       99998753

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.5e-26  Score=195.72  Aligned_cols=171  Identities=19%  Similarity=0.197  Sum_probs=133.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+..   .+.+..+++...+.++.++.+|++|.+++++++++     +
T Consensus         6 ~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~---~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (275)
T PRK05876          6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKP---GLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG   82 (275)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            489999999999999999999999999999986533   33333334433345688899999999999988875     5


Q ss_pred             CCCEEEEccccCCcCCCccChH----HHHHHhHHHH----HHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPL----KYYHNITSNT----LVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~----~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||+.......+.+.    ..++.|+.++    +.++|.|.+++ .++||++||.+.+.           +.+
T Consensus        83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~-----------~~~  151 (275)
T PRK05876         83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLV-----------PNA  151 (275)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhcc-----------CCC
Confidence            7999999999865544443333    3446666664    44666676665 68999999988773           556


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...|+.||++++.+++.++.|   .|+++++++||.+.|..
T Consensus       152 ~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  193 (275)
T PRK05876        152 GLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNL  193 (275)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccccc
Confidence            6889999999999999999987   58999999999887754

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.9e-26  Score=199.59  Aligned_cols=183  Identities=16%  Similarity=0.085  Sum_probs=139.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||++|||+++|++|+++|++|++++|+....++..+.+.+. ..+.++.++++|++|.+++++++++     +
T Consensus        14 gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~-~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~   92 (313)
T PRK05854         14 GKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTA-VPDAKLSLRALDLSSLASVAALGEQLRAEGR   92 (313)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-CCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            499999999999999999999999999999997544333333333322 1134688999999999999988876     6


Q ss_pred             CCCEEEEccccCCcCC---CccChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccc-cCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGE---STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATY-GEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~---~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~-g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+.....   ..+..+..++.|+.+    ++.++|.|.+. .++||++||.+.+ +.....++.++.+..+
T Consensus        93 ~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~~~~~~~~  171 (313)
T PRK05854         93 PIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLNWERSYAG  171 (313)
T ss_pred             CccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCcccccccccCcc
Confidence            7999999999864322   335566678888887    45567777654 5799999997764 3333334444455667


Q ss_pred             CChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN-----SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e-----~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++.+.+++.++++     .|+++++++||+|.|.+
T Consensus       172 ~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~  214 (313)
T PRK05854        172 MRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNL  214 (313)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCc
Confidence            889999999999999999864     47999999999998855

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.94  E-value=1.5e-25  Score=203.46  Aligned_cols=174  Identities=27%  Similarity=0.422  Sum_probs=139.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      ++|+||||+||||++|+++|+++|++|++++|.......   ....... ...++++..|+.+..     +.  ++|+||
T Consensus       121 mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~---~~~~~~~-~~~~~~~~~Di~~~~-----~~--~~D~Vi  189 (436)
T PLN02166        121 LRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKE---NLVHLFG-NPRFELIRHDVVEPI-----LL--EVDQIY  189 (436)
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHh---Hhhhhcc-CCceEEEECcccccc-----cc--CCCEEE
Confidence            789999999999999999999999999999974322111   1111111 236788889987652     23  689999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCC-----CCCCCChHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET-----PQAPINPYGKAKK  225 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~-----~~~~~~~Y~~sK~  225 (267)
                      |+|+...+.....++.+.++.|+.++.++++++.+.+ .++|++||.++||.....+++|+.     |..+.+.|+.+|.
T Consensus       190 HlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~  268 (436)
T PLN02166        190 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-ARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKR  268 (436)
T ss_pred             ECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC-CEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHH
Confidence            9999765444445778889999999999999999887 499999999999976656677763     5566788999999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          226 MAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       226 a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      ++|.+++.++++++++++++||+       ++|||++.
T Consensus       269 ~aE~~~~~y~~~~~l~~~ilR~~-------~vYGp~~~  299 (436)
T PLN02166        269 TAETLAMDYHRGAGVEVRIARIF-------NTYGPRMC  299 (436)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEEc-------cccCCCCC
Confidence            99999999998889999999999       99999853

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.94  E-value=8.7e-26  Score=192.09  Aligned_cols=171  Identities=17%  Similarity=0.146  Sum_probs=131.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCC--CCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP--EPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +|+++||||+||||++++++|+++|++|++++|+...   ..+..+++..  .+.++.++++|++|+++++++++.    
T Consensus         7 ~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (260)
T PRK07063          7 GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAAL---AERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA   83 (260)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3899999999999999999999999999999975433   3333333322  245688999999999999988875    


Q ss_pred             -CCCCEEEEccccCCcCCCccC----hHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYVGESTLD----PLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~~~~~~----~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                       +++|+||||||........+.    .+..++.|+.+    ++.++|.|.+++.++||++||...+.           +.
T Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~  152 (260)
T PRK07063         84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFK-----------II  152 (260)
T ss_pred             hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhcc-----------CC
Confidence             689999999997544332222    23344555555    45577777777778999999977652           34


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +....|+.||++++.+++.+++|   .|++++.|+||+|.|.+
T Consensus       153 ~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~  195 (260)
T PRK07063        153 PGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQL  195 (260)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChh
Confidence            45678999999999999999988   57999999999988754

>PRK08589 short chain dehydrogenase; Validated

Probab=99.94  E-value=1.4e-25  Score=192.37  Aligned_cols=169  Identities=18%  Similarity=0.209  Sum_probs=131.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||++|||++++++|+++|++|++++|+    ++..+..+++...+.++.++.+|++|.++++++++.     +
T Consensus         6 ~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          6 NKVAVITGASTGIGQASAIALAQEGAYVLAVDIA----EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc----HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            4899999999999999999999999999999974    233333344333345788999999999999888875     6


Q ss_pred             CCCEEEEccccCCc-CCCccChHH----HHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYV-GESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~-~~~~~~~~~----~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||.... ....+.+.+    .++.|+.+    ++.++|.|.+.+ ++||++||.+.+.           +.+
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~-----------~~~  149 (272)
T PRK08589         82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQA-----------ADL  149 (272)
T ss_pred             CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcC-----------CCC
Confidence            79999999998632 233333333    33455554    456788887765 7999999987763           344


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ....|+.||++++.++++++.|   .|+++++|.||.|.|.+
T Consensus       150 ~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  191 (272)
T PRK08589        150 YRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPL  191 (272)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCch
Confidence            5678999999999999999987   57999999999988864

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.94  E-value=1.1e-25  Score=190.74  Aligned_cols=169  Identities=14%  Similarity=0.130  Sum_probs=130.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||++|||++++++|+++|++|++++|..  .++..+.+++   .+.++.++.+|++|.+++++++++     +
T Consensus         8 ~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~--~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   82 (251)
T PRK12481          8 GKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE--APETQAQVEA---LGRKFHFITADLIQQKDIDSIVSQAVEVMG   82 (251)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch--HHHHHHHHHH---cCCeEEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            39999999999999999999999999999988632  2222233322   245788999999999999998875     6


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHH----HHHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSN----TLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~----~~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||+....+..+    ..+..++.|+.+    ++.+++.|.+++ .++||++||.+.+.           +.+
T Consensus        83 ~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~-----------~~~  151 (251)
T PRK12481         83 HIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQ-----------GGI  151 (251)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcC-----------CCC
Confidence            8999999999865443332    233445566655    455677776654 57999999987763           334


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ....|+.||++.+.+++.++.|   +|++++.|+||+|.|..
T Consensus       152 ~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~  193 (251)
T PRK12481        152 RVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDN  193 (251)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCc
Confidence            4678999999999999999987   68999999999998754

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.94  E-value=1.5e-25  Score=196.07  Aligned_cols=180  Identities=46%  Similarity=0.776  Sum_probs=148.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEE
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH  151 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li~  151 (267)
                      +||||||+|+||++++++|+++|++|+++++..+....   .+..... ...++.+.+|+++.++++++++..++|+|||
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~   76 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPE---ALKRGER-ITRVTFVEGDLRDRELLDRLFEEHKIDAVIH   76 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchh---hhhhhcc-ccceEEEECCCCCHHHHHHHHHhCCCcEEEE
Confidence            58999999999999999999999999988753332211   1111111 1257788999999999999998778999999


Q ss_pred             ccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 024488          152 FAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDII  231 (267)
Q Consensus       152 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~  231 (267)
                      +||..........+.+.++.|+.++..+++.+.+.+.+++|++||.++|+.....+++|+.+..+.+.|+.+|.++|.++
T Consensus        77 ~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~  156 (328)
T TIGR01179        77 FAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERIL  156 (328)
T ss_pred             CccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHH
Confidence            99976544445566778889999999999999988888999999999998766667888888888899999999999999


Q ss_pred             HHhhhc-CCCcEEEEeccccccccceeecCCC
Q 024488          232 LDFSKN-SDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       232 ~~~a~e-~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      +.++++ .+++++++||+       ++|||..
T Consensus       157 ~~~~~~~~~~~~~ilR~~-------~v~g~~~  181 (328)
T TIGR01179       157 RDLSKADPGLSYVILRYF-------NVAGADP  181 (328)
T ss_pred             HHHHHhccCCCEEEEecC-------cccCCCC
Confidence            999887 89999999999       7777753

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.94  E-value=1.8e-25  Score=194.85  Aligned_cols=182  Identities=30%  Similarity=0.446  Sum_probs=145.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|+||||||+||++++++|++.|  ++|++++|..... . .+.++.... ...++++.+|++|++++.++++..++|+|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~-~-~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v   77 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAG-N-LENLADLED-NPRYRFVKGDIGDRELVSRLFTEHQPDAV   77 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcch-h-hhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhhcCCCEE
Confidence            48999999999999999999987  7898887532111 1 111122211 23678899999999999999985569999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEeccccccCCCCC-CCCCCCCCCCCChHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSSTCATYGEPEKM-PITEETPQAPINPYGKAKKMA  227 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vSS~~~~g~~~~~-~~~e~~~~~~~~~Y~~sK~a~  227 (267)
                      ||+|+........+.++..++.|+.++.++++.+.+... .++|++||.++||..... +++|+.+..+.+.|+.+|.++
T Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~  157 (317)
T TIGR01181        78 VHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAAS  157 (317)
T ss_pred             EEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHH
Confidence            999997654444556777889999999999999988643 489999999999865433 678888888889999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          228 EDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       228 e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      |.+++.++.+.+++++++||+       ++|||+..
T Consensus       158 e~~~~~~~~~~~~~~~i~R~~-------~i~G~~~~  186 (317)
T TIGR01181       158 DHLVRAYHRTYGLPALITRCS-------NNYGPYQF  186 (317)
T ss_pred             HHHHHHHHHHhCCCeEEEEec-------cccCCCCC
Confidence            999999988899999999999       88888753

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.1e-25  Score=193.49  Aligned_cols=166  Identities=19%  Similarity=0.209  Sum_probs=133.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc------
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (267)
                      +|+|+||||+||||++++++|+++|++|++++|+...   +. .+.+     ..++++.+|++|.++++++++.      
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~---~~-~l~~-----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   74 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEED---VA-ALEA-----EGLEAFQLDYAEPESIAALVAQVLELSG   74 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH---HH-HHHH-----CCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4899999999999999999999999999999975322   21 1211     2477899999999999888764      


Q ss_pred             CCCCEEEEccccCCcCCCccCh----HHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +++|+||||||........+.+    +..++.|+.+    ++.++|.|.+.+.++||++||.+.+.           +.+
T Consensus        75 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~-----------~~~  143 (277)
T PRK05993         75 GRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLV-----------PMK  143 (277)
T ss_pred             CCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcC-----------CCC
Confidence            4799999999986554433333    3456677777    67789999988889999999977652           455


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      +...|+.||++++.++++++.|   .|+++++|+||+|.|.+.
T Consensus       144 ~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~  186 (277)
T PRK05993        144 YRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFR  186 (277)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchh
Confidence            6789999999999999999876   689999999999988643

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.94  E-value=1.9e-25  Score=196.23  Aligned_cols=165  Identities=22%  Similarity=0.348  Sum_probs=133.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      +|+||||||+||||++++++|+++|  ++|++++|.....   .+..++. . ..++.++.+|++|.+++.++++  ++|
T Consensus         4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~---~~~~~~~-~-~~~~~~v~~Dl~d~~~l~~~~~--~iD   76 (324)
T TIGR03589         4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQ---WEMQQKF-P-APCLRFFIGDVRDKERLTRALR--GVD   76 (324)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHH---HHHHHHh-C-CCcEEEEEccCCCHHHHHHHHh--cCC
Confidence            3899999999999999999999986  7899888643221   1111111 1 2468899999999999999987  799


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (267)
                      +|||+||.........++++.++.|+.++.++++++.+.+.++||++||...              ..|.++|+.||+++
T Consensus        77 ~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~--------------~~p~~~Y~~sK~~~  142 (324)
T TIGR03589        77 YVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA--------------ANPINLYGATKLAS  142 (324)
T ss_pred             EEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC--------------CCCCCHHHHHHHHH
Confidence            9999999764444455677889999999999999999988889999999533              23467899999999


Q ss_pred             HHHHHHhhh---cCCCcEEEEeccccccccceeecCCC
Q 024488          228 EDIILDFSK---NSDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       228 e~l~~~~a~---e~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      |.+++.++.   +.|++++++|||       ++|||+.
T Consensus       143 E~l~~~~~~~~~~~gi~~~~lR~g-------~v~G~~~  173 (324)
T TIGR03589       143 DKLFVAANNISGSKGTRFSVVRYG-------NVVGSRG  173 (324)
T ss_pred             HHHHHHHHhhccccCcEEEEEeec-------ceeCCCC
Confidence            999988654   479999999999       9998863

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.94  E-value=3.5e-25  Score=197.79  Aligned_cols=174  Identities=22%  Similarity=0.250  Sum_probs=140.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||+|+||++++++|.++|++|++++|.....  .    ..   .....+++.+|++|.+.+..+++  ++|+||
T Consensus        22 ~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~--~----~~---~~~~~~~~~~Dl~d~~~~~~~~~--~~D~Vi   90 (370)
T PLN02695         22 LRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH--M----SE---DMFCHEFHLVDLRVMENCLKVTK--GVDHVF   90 (370)
T ss_pred             CEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc--c----cc---ccccceEEECCCCCHHHHHHHHh--CCCEEE
Confidence            8999999999999999999999999999999743211  0    00   01135678899999999888887  789999


Q ss_pred             EccccCCcC-CCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCC----CCCCCCC--CCCCCChHHHH
Q 024488          151 HFAAVAYVG-ESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEK----MPITEET--PQAPINPYGKA  223 (267)
Q Consensus       151 ~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~----~~~~e~~--~~~~~~~Y~~s  223 (267)
                      |+|+..... ....++...+..|+.++.++++++.+.+.++||++||..+|+....    .++.|+.  +..|.+.|+.+
T Consensus        91 h~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~s  170 (370)
T PLN02695         91 NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLE  170 (370)
T ss_pred             EcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHH
Confidence            999864321 1223445567789999999999999988899999999999985432    2355654  66788999999


Q ss_pred             HHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCC
Q 024488          224 KKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       224 K~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      |.+.|.+++.++++++++++++||+       ++|||+.
T Consensus       171 K~~~E~~~~~~~~~~g~~~~ilR~~-------~vyGp~~  202 (370)
T PLN02695        171 KLATEELCKHYTKDFGIECRIGRFH-------NIYGPFG  202 (370)
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEEC-------CccCCCC
Confidence            9999999999988899999999999       9999975

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.2e-25  Score=195.99  Aligned_cols=171  Identities=16%  Similarity=0.151  Sum_probs=135.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++|||||||||++++++|+++|++|++++|+..   .+.+..+++...+.++.++.+|++|.++++++++.     +
T Consensus         7 ~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~---~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (330)
T PRK06139          7 GAVVVITGASSGIGQATAEAFARRGARLVLAARDEE---ALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG   83 (330)
T ss_pred             CCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            389999999999999999999999999999997543   33333333333355788899999999999988865     6


Q ss_pred             CCCEEEEccccCCcCCCccChH----HHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPL----KYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~----~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|++|||||+.......+.+.    +.++.|+.+    ++.++|.|.+++.++||++||.+.+.           +.+.
T Consensus        84 ~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~-----------~~p~  152 (330)
T PRK06139         84 RIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFA-----------AQPY  152 (330)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcC-----------CCCC
Confidence            8999999999865554444333    345666665    45578888888778999999987763           4455


Q ss_pred             CChHHHHHHHHHHHHHHhhhc----CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN----SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e----~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++.++++++++.|    .+++++.|.||.|.|..
T Consensus       153 ~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~  194 (330)
T PRK06139        153 AAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPG  194 (330)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcc
Confidence            789999999999999999987    27999999999887753

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.7e-25  Score=195.00  Aligned_cols=185  Identities=13%  Similarity=0.052  Sum_probs=136.9

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      .+|+|+||||+||||+++|++|+++|++|++++|+....+...+.+.+. ..+.++.++.+|++|.+++++++++     
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   93 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAA-TPGADVTLQELDLTSLASVRAAADALRAAY   93 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-CCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence            3499999999999999999999999999999997543322222222221 1134688999999999999988875     


Q ss_pred             CCCCEEEEccccCCcCC--CccChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEecccccc--CCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGE--STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYG--EPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~--~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g--~~~~~~~~e~~~~~  215 (267)
                      +++|+||||||...+..  ..+..+..++.|+.+    ++.+++.|.+.+.++||++||.+.+.  .....+...+.+..
T Consensus        94 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~  173 (306)
T PRK06197         94 PRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYN  173 (306)
T ss_pred             CCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCC
Confidence            57999999999754332  234456678888888    77788888887778999999987543  22222222233455


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEE--Eecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMI--LRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~--vrp~~v~~~~  254 (267)
                      +...|+.||++.+.+++.++.+   .++++++  ++||+|.|.+
T Consensus       174 ~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~  217 (306)
T PRK06197        174 RVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL  217 (306)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence            6789999999999999999987   3666654  5799888754

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.94  E-value=3.2e-25  Score=193.12  Aligned_cols=175  Identities=33%  Similarity=0.508  Sum_probs=145.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCC-CEEE
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF-DAVM  150 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~-D~li  150 (267)
                      .||||||+||||++++++|+++|++|+.++|.........          ..+.++.+|++|.+.+.++.+  .. |+||
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----------~~~~~~~~d~~~~~~~~~~~~--~~~d~vi   69 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL----------SGVEFVVLDLTDRDLVDELAK--GVPDAVI   69 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc----------cccceeeecccchHHHHHHHh--cCCCEEE
Confidence            4999999999999999999999999999997554332111          357788999999988887777  44 9999


Q ss_pred             EccccCCcCCCcc-ChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCC-CCCCCCCC-CCCCCCChHHHHHHHH
Q 024488          151 HFAAVAYVGESTL-DPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP-EKMPITEE-TPQAPINPYGKAKKMA  227 (267)
Q Consensus       151 ~~Ag~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~-~~~~~~e~-~~~~~~~~Y~~sK~a~  227 (267)
                      |+|+......... .+.+.++.|+.++.++++++.+.+.++||+.||.++|+.. ...+++|+ .+..|.+.|+.||.++
T Consensus        70 h~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~  149 (314)
T COG0451          70 HLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAA  149 (314)
T ss_pred             EccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHH
Confidence            9999865443322 4567899999999999999999888999998888877654 33467888 6777777999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEeccccccccceeecCCCCCC
Q 024488          228 EDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTDR  265 (267)
Q Consensus       228 e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~~  265 (267)
                      |.++..+..+++++++++||+       ++|||+....
T Consensus       150 E~~~~~~~~~~~~~~~ilR~~-------~vyGp~~~~~  180 (314)
T COG0451         150 EQLLRAYARLYGLPVVILRPF-------NVYGPGDKPD  180 (314)
T ss_pred             HHHHHHHHHHhCCCeEEEeee-------eeeCCCCCCC
Confidence            999999998889999999999       9999997764

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.2e-25  Score=188.98  Aligned_cols=172  Identities=15%  Similarity=0.105  Sum_probs=133.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+..+   ..+..+++...+.++.++.+|++|++++++++++     +
T Consensus         6 ~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T PRK07478          6 GKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAE---LDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFG   82 (254)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            3899999999999999999999999999999975433   3333333333345788999999999999988875     5


Q ss_pred             CCCEEEEccccCCc-CCCc----cChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYV-GEST----LDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~-~~~~----~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||+... .+..    +..+..++.|+.+    ++.++|.|.+.+.++||++||.+.+.          .+.+
T Consensus        83 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~----------~~~~  152 (254)
T PRK07478         83 GLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHT----------AGFP  152 (254)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhc----------cCCC
Confidence            89999999997532 2211    2334456667655    45578888888788999999987652          1344


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ....|+.||++.+.++++++.|   .|+++++|+||+|.|..
T Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  194 (254)
T PRK07478        153 GMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPM  194 (254)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcc
Confidence            5789999999999999999988   47999999999888864

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.94  E-value=2.5e-25  Score=212.80  Aligned_cols=185  Identities=28%  Similarity=0.431  Sum_probs=147.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      +|+||||||+|+||++++++|+++  |++|+++++.... .... .+... ....+++++.+|++|.+.+..++...++|
T Consensus         6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~-~~~~-~l~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D   82 (668)
T PLN02260          6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC-SNLK-NLNPS-KSSPNFKFVKGDIASADLVNYLLITEGID   82 (668)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc-chhh-hhhhc-ccCCCeEEEECCCCChHHHHHHHhhcCCC
Confidence            489999999999999999999998  6899998863211 1111 11111 11246889999999999888877555899


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEEeccccccCCCCCC---CCCCCCCCCCChHHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMP---ITEETPQAPINPYGKA  223 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~---~~e~~~~~~~~~Y~~s  223 (267)
                      +|||+|+.........++.+.++.|+.++.++++++++.+ .+++|++||..+||.....+   .+|+.+..|.+.|+.+
T Consensus        83 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~s  162 (668)
T PLN02260         83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSAT  162 (668)
T ss_pred             EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHH
Confidence            9999999865444445667788999999999999999876 78999999999998654432   3566677788899999


Q ss_pred             HHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          224 KKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       224 K~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      |.++|.+++.++++++++++++||+       ++|||++..
T Consensus       163 K~~aE~~v~~~~~~~~l~~vilR~~-------~VyGp~~~~  196 (668)
T PLN02260        163 KAGAEMLVMAYGRSYGLPVITTRGN-------NVYGPNQFP  196 (668)
T ss_pred             HHHHHHHHHHHHHHcCCCEEEECcc-------cccCcCCCc
Confidence            9999999999988899999999999       999998643

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.8e-25  Score=189.51  Aligned_cols=173  Identities=17%  Similarity=0.120  Sum_probs=132.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||++|||++++++|+++|++|++++|+..+.++..+.+.+.. .+.++.++.+|++|.+++++++++     +
T Consensus         8 ~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          8 GRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKF-PGARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhC-CCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            3999999999999999999999999999999975433333333222211 123678899999999999888765     6


Q ss_pred             CCCEEEEccccCCcCCCccChHHH----HHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLKY----YHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~~----~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||........+.+.+.    ++.|+.+    ++.++|.|.+.+.++||++||.+.+.           +.+.
T Consensus        87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  155 (265)
T PRK07062         87 GVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQ-----------PEPH  155 (265)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccC-----------CCCC
Confidence            799999999986444433333333    3444443    56688888887778999999977753           3445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.+|++.+.++++++.|   .|++++.|+||+|.|..
T Consensus       156 ~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~  196 (265)
T PRK07062        156 MVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQ  196 (265)
T ss_pred             chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccch
Confidence            678999999999999999988   58999999999888754

>PLN02583 cinnamoyl-CoA reductase

Probab=99.94  E-value=4.7e-25  Score=191.41  Aligned_cols=181  Identities=15%  Similarity=0.117  Sum_probs=138.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+|+||||+|+||++++++|+++||+|+++.|+... ....+.+.++...+.++.++.+|++|.+++.+++.  ++|.++
T Consensus         7 k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~--~~d~v~   83 (297)
T PLN02583          7 KSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGE-TEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK--GCSGLF   83 (297)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchh-hhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc--CCCEEE
Confidence            899999999999999999999999999999874321 12222223322223468889999999999999887  789999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEEeccccccC--C---CCCCCCCCCCCCC------CC
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYGE--P---EKMPITEETPQAP------IN  218 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~iV~vSS~~~~g~--~---~~~~~~e~~~~~~------~~  218 (267)
                      |.++....  .....++.++.|+.++.++++++.+. +.++||++||.++++.  .   ...+++|+.+..+      ..
T Consensus        84 ~~~~~~~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  161 (297)
T PLN02583         84 CCFDPPSD--YPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKL  161 (297)
T ss_pred             EeCccCCc--ccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhccc
Confidence            98764321  12235678899999999999999886 4789999999876531  1   2235667654322      23


Q ss_pred             hHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          219 PYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       219 ~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      .|+.||..+|.+++.++++.++++++|||+       ++|||+..
T Consensus       162 ~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~-------~v~Gp~~~  199 (297)
T PLN02583        162 WHALAKTLSEKTAWALAMDRGVNMVSINAG-------LLMGPSLT  199 (297)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcEEEEcCC-------cccCCCCC
Confidence            799999999999999988889999999999       88888754

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.94  E-value=3.9e-25  Score=187.95  Aligned_cols=170  Identities=16%  Similarity=0.167  Sum_probs=132.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+||||||+||||++++++|+++|++|++++|+ ++.+++.+.+.+   .+.++.++++|+++.+++++++++     +
T Consensus        15 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   90 (258)
T PRK06935         15 GKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEK---EGRKVTFVQVDLTKPESAEKVVKEALEEFG   90 (258)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHh---cCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3999999999999999999999999999999875 222233333322   245788999999999999988875     5


Q ss_pred             CCCEEEEccccCCcCCCccCh----HHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|++|||||.....+..+.+    +..++.|+.+    ++.+++.|.+++.++||++||...+.           +.+.
T Consensus        91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  159 (258)
T PRK06935         91 KIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQ-----------GGKF  159 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhcc-----------CCCC
Confidence            799999999986443333322    3344555555    55577888887778999999987763           3345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.+|++++.+++++++|   .|+++++|+||+|.|..
T Consensus       160 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~  200 (258)
T PRK06935        160 VPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTAN  200 (258)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccc
Confidence            678999999999999999998   58999999999887754

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.93  E-value=3e-25  Score=189.00  Aligned_cols=172  Identities=13%  Similarity=0.096  Sum_probs=128.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCC-CCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      +|+++||||++|||++++++|+++|++|++++++  +.+.+.+..+++.. .+.++.++++|++|+++++++++.     
T Consensus         8 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (260)
T PRK08416          8 GKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNS--NVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF   85 (260)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC--CHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            3999999999999999999999999999988752  23333333333321 244788999999999999988876     


Q ss_pred             CCCCEEEEccccCCc------CCCccC-h---HHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYV------GESTLD-P---LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPIT  209 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~------~~~~~~-~---~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~  209 (267)
                      +++|+||||||+...      .+..+. +   ...++.|+.+    ++.+++.|.+.+.++||++||.+.+-        
T Consensus        86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------  157 (260)
T PRK08416         86 DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLV--------  157 (260)
T ss_pred             CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccccc--------
Confidence            689999999986421      121111 2   2233344433    55677888777778999999976541        


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          210 EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       210 e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                         +.+.+..|+.||++++.++++++.|   +|+++++|+||++.|..
T Consensus       158 ---~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~  202 (260)
T PRK08416        158 ---YIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDA  202 (260)
T ss_pred             ---CCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChh
Confidence               3445778999999999999999998   48999999999988864

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.93  E-value=5.1e-25  Score=187.32  Aligned_cols=167  Identities=21%  Similarity=0.133  Sum_probs=127.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+.    ...+..+++...+.++.++.+|++|.+++++++++     +
T Consensus         8 ~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          8 GKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE----LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFG   83 (260)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch----HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999999743    12222233323345688899999999998888775     5


Q ss_pred             CCCEEEEccccCC-cCCCc----cChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAY-VGEST----LDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~-~~~~~----~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||... ..+..    +..+..++.|+.+    ++.+++.|.+.+.++||++||.+.++.             
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-------------  150 (260)
T PRK12823         84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI-------------  150 (260)
T ss_pred             CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC-------------
Confidence            8999999998642 12222    2233444556555    456888888877789999999877631             


Q ss_pred             CCChHHHHHHHHHHHHHHhhhcC---CCcEEEEeccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKNS---DMAVMILRLVVFFTL  253 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e~---g~~~~~vrp~~v~~~  253 (267)
                      +..+|+.||++.+.+++.++.++   |+++++|+||.|.|.
T Consensus       151 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  191 (260)
T PRK12823        151 NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAP  191 (260)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCc
Confidence            24579999999999999999884   899999999966663

>PRK06398 aldose dehydrogenase; Validated

Probab=99.93  E-value=8.6e-25  Score=186.03  Aligned_cols=160  Identities=13%  Similarity=0.121  Sum_probs=128.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+...              ...+.++++|++|++++++++++     +
T Consensus         6 gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~--------------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   71 (258)
T PRK06398          6 DKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS--------------YNDVDYFKVDVSNKEQVIKGIDYVISKYG   71 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc--------------cCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999875321              12577899999999999888875     5


Q ss_pred             CCCEEEEccccCCcCCCccChHH----HHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLK----YYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+....+.++.+.+    .++.|+.++    +.++|.|.+.+.++||++||.+.+.           +.++
T Consensus        72 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  140 (258)
T PRK06398         72 RIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFA-----------VTRN  140 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhcc-----------CCCC
Confidence            79999999998654444433333    346666664    4467777777778999999987763           4566


Q ss_pred             CChHHHHHHHHHHHHHHhhhcC--CCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKNS--DMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e~--g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.+|++++.+++.++.|+  .+++++|+||+|.|..
T Consensus       141 ~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~  180 (258)
T PRK06398        141 AAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPL  180 (258)
T ss_pred             CchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchH
Confidence            8899999999999999999883  4999999999988754

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.93  E-value=7.5e-25  Score=185.84  Aligned_cols=174  Identities=13%  Similarity=0.069  Sum_probs=131.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||++|||+++|++|+++|++|++++|+..  ....+..+++...+.++.++++|++|++++++++++     +
T Consensus         8 ~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   85 (254)
T PRK06114          8 GQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTD--DGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG   85 (254)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcc--hHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999997432  122233333323345788899999999999988875     6


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||........+    +.++.++.|+.++    +.+++.|.+.+.++||++||.+.+...         +..+
T Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~~~  156 (254)
T PRK06114         86 ALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVN---------RGLL  156 (254)
T ss_pred             CCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCC---------CCCC
Confidence            7999999999865433322    2334455666664    556777777777899999997765211         1123


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.+|++.+.+++.++.|   .|+++++|+||+|.|..
T Consensus       157 ~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~  197 (254)
T PRK06114        157 QAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPM  197 (254)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcc
Confidence            578999999999999999987   58999999999887754

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.93  E-value=2.3e-25  Score=194.16  Aligned_cols=168  Identities=21%  Similarity=0.305  Sum_probs=129.0

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHH----HHhhc---CC
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVN----KFFSE---NA  145 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~----~~~~~---~~  145 (267)
                      ||||||+|+||++|+++|+++|++++++.++.....   . .         ..+..+|+.|..+.+    ++++.   .+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~---~-~---------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   68 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT---K-F---------VNLVDLDIADYMDKEDFLAQIMAGDDFGD   68 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcch---H-H---------HhhhhhhhhhhhhHHHHHHHHhcccccCC
Confidence            799999999999999999999997666654322110   0 0         112235555543333    33321   37


Q ss_pred             CCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHH
Q 024488          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKK  225 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~  225 (267)
                      +|+|||+||.....  ..+++..++.|+.++.++++++.+.+. ++|++||.++||.....+.+|+.+..|.+.|+.||.
T Consensus        69 ~d~Vih~A~~~~~~--~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~  145 (308)
T PRK11150         69 IEAIFHEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKF  145 (308)
T ss_pred             ccEEEECceecCCc--CCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHH
Confidence            99999999864332  224456788999999999999998876 799999999998765556788888888899999999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          226 MAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       226 a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      ++|.+++.++.+.+++++++||+       ++|||++.
T Consensus       146 ~~E~~~~~~~~~~~~~~~~lR~~-------~vyG~~~~  176 (308)
T PRK11150        146 LFDEYVRQILPEANSQICGFRYF-------NVYGPREG  176 (308)
T ss_pred             HHHHHHHHHHHHcCCCEEEEeee-------eecCCCCC
Confidence            99999999988889999999999       99999864

>PRK06196 oxidoreductase; Provisional

Probab=99.93  E-value=4.1e-25  Score=193.31  Aligned_cols=179  Identities=14%  Similarity=0.095  Sum_probs=134.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+|+||||+||||++++++|+++|++|++++|+..   ...+..+++    .++.++++|++|.+++++++++     +
T Consensus        26 ~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~---~~~~~~~~l----~~v~~~~~Dl~d~~~v~~~~~~~~~~~~   98 (315)
T PRK06196         26 GKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPD---VAREALAGI----DGVEVVMLDLADLESVRAFAERFLDSGR   98 (315)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHh----hhCeEEEccCCCHHHHHHHHHHHHhcCC
Confidence            389999999999999999999999999999997432   233333332    1377899999999999988865     6


Q ss_pred             CCCEEEEccccCCcCC--CccChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccC-CCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGE--STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGE-PEKMPITEETPQAPI  217 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~--~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~-~~~~~~~e~~~~~~~  217 (267)
                      ++|+||||||+.....  ..+..+..++.|+.+    ++.++|.|.+.+.++||++||.+.... ..........+..+.
T Consensus        99 ~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~  178 (315)
T PRK06196         99 RIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKW  178 (315)
T ss_pred             CCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChH
Confidence            8999999999754322  223445667788777    566788887777789999999765421 111111112344566


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ..|+.||++.+.+++.++++   .|+++++|+||+|.|.+.
T Consensus       179 ~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~  219 (315)
T PRK06196        179 LAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQ  219 (315)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCcc
Confidence            78999999999999999876   589999999998877653

>PLN02686 cinnamoyl-CoA reductase

Probab=99.93  E-value=4.2e-25  Score=197.04  Aligned_cols=186  Identities=17%  Similarity=0.177  Sum_probs=138.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCC---CCCceEEEEccCCCHHHHHHHhhcC
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP---EPGRLQFIYADLGDAKAVNKFFSEN  144 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~v~~~~~~~  144 (267)
                      ..+|+||||||+||||++++++|+++|++|+++.|+....+.+ +.+.....   ....+.++.+|++|.+++.++++  
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~--  127 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD--  127 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH--
Confidence            3459999999999999999999999999999887643221111 11111100   01257889999999999999998  


Q ss_pred             CCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEEecc--ccccCC--CC--CCCCCCC-----
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTC--ATYGEP--EK--MPITEET-----  212 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~iV~vSS~--~~~g~~--~~--~~~~e~~-----  212 (267)
                      ++|.+||+|+...............+.|+.++.++++++.+. +.+++|++||.  .+|+..  ..  ..++|+.     
T Consensus       128 ~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~  207 (367)
T PLN02686        128 GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDES  207 (367)
T ss_pred             hccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChh
Confidence            689999999875432211122345567899999999999886 68899999996  466531  11  2355543     


Q ss_pred             -CCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          213 -PQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       213 -~~~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                       +..+.+.|+.||.++|.+++.+++++|++++++||+       ++|||++.
T Consensus       208 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~-------~vyGp~~~  252 (367)
T PLN02686        208 FCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPA-------LVTGPGFF  252 (367)
T ss_pred             hcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCC-------ceECCCCC
Confidence             334567899999999999999998899999999999       99999864

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4.9e-25  Score=187.29  Aligned_cols=169  Identities=15%  Similarity=0.099  Sum_probs=130.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+|+||||+||||++++++|+++|++|++++|+.   +.+.+..+++...+ ++.++.+|++|.+++.+++++     +.
T Consensus         3 ~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~---~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          3 LKVFITGASSGIGQALAREYARQGATLGLVARRT---DALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAHGL   78 (257)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999999999753   23333333332222 788999999999999888765     56


Q ss_pred             CCEEEEccccCCcCCC-----ccChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGES-----TLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~-----~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      +|+||||||.......     .+..+..++.|+.++..    ++|.|.+++.++||++||.+.+.           +.+.
T Consensus        79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~-----------~~~~  147 (257)
T PRK07024         79 PDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVR-----------GLPG  147 (257)
T ss_pred             CCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC-----------CCCC
Confidence            8999999997543221     12344556677777544    66788888888999999976652           3445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|++||++.+.++++++.|   .|+++++++||.|.|..
T Consensus       148 ~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  188 (257)
T PRK07024        148 AGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPM  188 (257)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCch
Confidence            678999999999999999865   68999999999777653

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.93  E-value=6.4e-25  Score=186.78  Aligned_cols=169  Identities=15%  Similarity=0.057  Sum_probs=127.0

Q ss_pred             cEEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           71 THVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        71 k~vlVTGas--ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      |+++||||+  +|||+++|++|+++|++|++++|+.+..+.+.+..++..  +.++.++++|++|+++++++++.     
T Consensus         8 k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          8 KTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            999999997  899999999999999999999875444333443333331  35688899999999999988875     


Q ss_pred             CCCCEEEEccccCCc----CCCccChHH----HHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYV----GESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~----~~~~~~~~~----~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~  211 (267)
                      +++|++|||||+...    .+..+...+    .++.|..+    ++.++|.|.+  .++||++||.+..           
T Consensus        86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~-----------  152 (257)
T PRK08594         86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGE-----------  152 (257)
T ss_pred             CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCc-----------
Confidence            789999999997532    222222222    23344444    3456666643  4799999997654           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .+.+....|++||++++.|+++++.|   .|++++.|.||+|.|..
T Consensus       153 ~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~  198 (257)
T PRK08594        153 RVVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLS  198 (257)
T ss_pred             cCCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHh
Confidence            23445678999999999999999987   58999999999998854

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.93  E-value=1.1e-24  Score=190.93  Aligned_cols=173  Identities=26%  Similarity=0.366  Sum_probs=144.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      ++|+||||+|+||++++++|+++|++|++++|+......    +.     ...++++.+|++|.++++++++  ++|+||
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~-----~~~~~~~~~D~~~~~~l~~~~~--~~d~vi   69 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----LE-----GLDVEIVEGDLRDPASLRKAVA--GCRALF   69 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----cc-----cCCceEEEeeCCCHHHHHHHHh--CCCEEE
Confidence            479999999999999999999999999999975432111    11     1257889999999999999998  789999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccC-CCCCCCCCCCCCCC---CChHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGE-PEKMPITEETPQAP---INPYGKAKKM  226 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~-~~~~~~~e~~~~~~---~~~Y~~sK~a  226 (267)
                      |+|+...  .....+++.++.|+.++.++++.+.+.+.+++|++||.++|+. ....+++|+.+..+   .+.|+.+|.+
T Consensus        70 ~~a~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  147 (328)
T TIGR03466        70 HVAADYR--LWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFL  147 (328)
T ss_pred             Eeceecc--cCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHH
Confidence            9998542  2334567888999999999999999988899999999999985 34457788776554   4689999999


Q ss_pred             HHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          227 AEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       227 ~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      .|.+++.++.+++++++++||+       ++|||+..
T Consensus       148 ~e~~~~~~~~~~~~~~~ilR~~-------~~~G~~~~  177 (328)
T TIGR03466       148 AEQAALEMAAEKGLPVVIVNPS-------TPIGPRDI  177 (328)
T ss_pred             HHHHHHHHHHhcCCCEEEEeCC-------ccCCCCCC
Confidence            9999999998889999999999       89998754

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.93  E-value=6.5e-25  Score=193.47  Aligned_cols=170  Identities=18%  Similarity=0.178  Sum_probs=133.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+|+||||+||||++++++|+++|++|++++|+..   .+.+..+++...+.++.++.+|++|.++++++++.     +
T Consensus         8 ~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~---~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g   84 (334)
T PRK07109          8 RQVVVITGASAGVGRATARAFARRGAKVVLLARGEE---GLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG   84 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence            489999999999999999999999999999997543   33333333333356788999999999999988765     6


Q ss_pred             CCCEEEEccccCCcCCCccCh----HHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|++|||||.....+..+.+    +..++.|+.+    ++.+++.|.+++.++||++||.+.+.           +.+.
T Consensus        85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~-----------~~~~  153 (334)
T PRK07109         85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYR-----------SIPL  153 (334)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhcc-----------CCCc
Confidence            899999999976544433333    3334455444    56688889888778999999988874           3455


Q ss_pred             CChHHHHHHHHHHHHHHhhhc-----CCCcEEEEeccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN-----SDMAVMILRLVVFFTL  253 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e-----~g~~~~~vrp~~v~~~  253 (267)
                      ...|+.+|++.+.++++++.|     .++++++|+||.|.|.
T Consensus       154 ~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~  195 (334)
T PRK07109        154 QSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTP  195 (334)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCc
Confidence            789999999999999999876     3699999999988874

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.93  E-value=7.8e-25  Score=186.58  Aligned_cols=174  Identities=18%  Similarity=0.149  Sum_probs=134.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc------
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (267)
                      +|+++||||+.|||+++|++|++.|++|++++|+.+..++..+.+......+.++..+.+|+++.++++++++.      
T Consensus         8 gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~   87 (270)
T KOG0725|consen    8 GKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFF   87 (270)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhC
Confidence            49999999999999999999999999999999755444444443333323345789999999999988877765      


Q ss_pred             CCCCEEEEccccCCcC-CCccChHHHHHH----hHHH-----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVG-ESTLDPLKYYHN----ITSN-----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~-~~~~~~~~~~~~----~~~~-----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                      +++|+||||||..... ..++..++.|+.    |..+     ++.+.+.+.+.+.+.|+++||.+.+.           +
T Consensus        88 GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~-----------~  156 (270)
T KOG0725|consen   88 GKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVG-----------P  156 (270)
T ss_pred             CCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEecccccc-----------C
Confidence            7899999999987644 345555555544    3332     33355556666788999999987763           2


Q ss_pred             CCCC-ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          214 QAPI-NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       214 ~~~~-~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..+. ..|+.+|+++++++++++.|   +|+++++|.||.|.|.+
T Consensus       157 ~~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~  201 (270)
T KOG0725|consen  157 GPGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL  201 (270)
T ss_pred             CCCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence            2223 79999999999999999998   79999999999999876

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.93  E-value=7.1e-26  Score=215.78  Aligned_cols=235  Identities=17%  Similarity=0.228  Sum_probs=163.1

Q ss_pred             CCcccccccCCCCCccccccCcccCCCCCcchhhHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEEEEcCCC
Q 024488            1 MLNFGRARTQQRQTRPTSFGGLDYADPKRKSNFAGKFILAAALTALCIFLLKQSPTFSSPSPFSQHEEGVTHVLVTGGAG   80 (267)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vlVTGasg   80 (267)
                      |+++|+++..+|.+++++.+++.   ..+..+.++.+......-.+.+-+|.....+....+....+.+ |++|||||+|
T Consensus       349 ~~~~g~~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~f~~eyw~~e~~kl~~~~~~~~l~g-kvvLVTGasg  424 (676)
T TIGR02632       349 MISFGKDKETARVAREFYVNAIN---VMRGAEAVSEYVSLPEQEAFDIEYWPLEEAKLRRMPKEKTLAR-RVAFVTGGAG  424 (676)
T ss_pred             eEEecCCHHHhhhhHHHHHHHHH---HHhhhhcccceecCchhhccchhhhhhhHHhhccCCCCcCCCC-CEEEEeCCCc
Confidence            78999999999999999998777   5555555556555444444333333221111111121222334 9999999999


Q ss_pred             hhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CCCCEEEEcccc
Q 024488           81 YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NAFDAVMHFAAV  155 (267)
Q Consensus        81 gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~~D~li~~Ag~  155 (267)
                      |||++++++|+++|++|++++|+....+...+.+.+.. ....+..+.+|++|.+++++++++     +++|+||||||.
T Consensus       425 gIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~-~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~  503 (676)
T TIGR02632       425 GIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQF-GAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGI  503 (676)
T ss_pred             HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhc-CCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence            99999999999999999999975433222222221110 123577899999999999988875     589999999998


Q ss_pred             CCcCCCccChHHHH----HHhHHH----HHHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHH
Q 024488          156 AYVGESTLDPLKYY----HNITSN----TLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKM  226 (267)
Q Consensus       156 ~~~~~~~~~~~~~~----~~~~~~----~~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a  226 (267)
                      .......+.+.+.|    +.|..+    ++.+++.|.+++ .++||++||...+.           +.+....|+.||++
T Consensus       504 ~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~-----------~~~~~~aY~aSKaA  572 (676)
T TIGR02632       504 ATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVY-----------AGKNASAYSAAKAA  572 (676)
T ss_pred             CCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcC-----------CCCCCHHHHHHHHH
Confidence            65444444444444    344444    345677777765 57999999966542           34457899999999


Q ss_pred             HHHHHHHhhhc---CCCcEEEEeccccc
Q 024488          227 AEDIILDFSKN---SDMAVMILRLVVFF  251 (267)
Q Consensus       227 ~e~l~~~~a~e---~g~~~~~vrp~~v~  251 (267)
                      .+.+++.++.+   .|++++.|+|+.|.
T Consensus       573 ~~~l~r~lA~el~~~gIrVn~V~Pg~V~  600 (676)
T TIGR02632       573 EAHLARCLAAEGGTYGIRVNTVNPDAVL  600 (676)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEECCcee
Confidence            99999999987   57999999999664

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.93  E-value=7.2e-25  Score=199.35  Aligned_cols=173  Identities=27%  Similarity=0.423  Sum_probs=138.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||+|+||++++++|+++|++|+++++......   +....... ..+++++.+|+.+..     +.  ++|+||
T Consensus       120 ~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~---~~~~~~~~-~~~~~~i~~D~~~~~-----l~--~~D~Vi  188 (442)
T PLN02206        120 LRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRK---ENVMHHFS-NPNFELIRHDVVEPI-----LL--EVDQIY  188 (442)
T ss_pred             CEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccch---hhhhhhcc-CCceEEEECCccChh-----hc--CCCEEE
Confidence            78999999999999999999999999999986432211   11111111 236788899987753     23  689999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCC-----CCCCCChHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET-----PQAPINPYGKAKK  225 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~-----~~~~~~~Y~~sK~  225 (267)
                      |+|+...+.....++.+.++.|+.++.++++++++.+. ++|++||..+|+.....+.+|+.     |..+.+.|+.+|.
T Consensus       189 HlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~  267 (442)
T PLN02206        189 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR  267 (442)
T ss_pred             EeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHH
Confidence            99997654444557788999999999999999998874 99999999999876555666653     4455788999999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEeccccccccceeecCCC
Q 024488          226 MAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       226 a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      ++|.++..+.++++++++++||+       ++|||+.
T Consensus       268 ~aE~~~~~y~~~~g~~~~ilR~~-------~vyGp~~  297 (442)
T PLN02206        268 TAETLTMDYHRGANVEVRIARIF-------NTYGPRM  297 (442)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEec-------cccCCCC
Confidence            99999999988899999999999       9999974

>PRK06194 hypothetical protein; Provisional

Probab=99.93  E-value=7.8e-25  Score=188.85  Aligned_cols=172  Identities=13%  Similarity=0.038  Sum_probs=131.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+..   .+.+..+++...+.++.++++|++|.++++++++.     +
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   82 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQD---ALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFG   82 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChH---HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999997433   23333333322245688899999999999988875     5


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHH----HHHHHHHHHcCC------CEEEEEeccccccCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNT----LVVLESMARHGV------DTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~~------~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                      ++|+||||||........+    ..+..++.|+.++    +.++|.|.+++.      ++||++||.+.+.         
T Consensus        83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---------  153 (287)
T PRK06194         83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL---------  153 (287)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc---------
Confidence            7999999999865544333    2333456777664    446677877654      6999999987774         


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhcC-----CCcEEEEeccccccccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKNS-----DMAVMILRLVVFFTLVA  255 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e~-----g~~~~~vrp~~v~~~~~  255 (267)
                        +.++...|+.+|++++.+++.++.++     +++++++.||+|.+.+.
T Consensus       154 --~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~  201 (287)
T PRK06194        154 --APPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIW  201 (287)
T ss_pred             --CCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccc
Confidence              33457789999999999999998873     47888999999987654

>PRK06128 oxidoreductase; Provisional

Probab=99.93  E-value=6e-25  Score=191.01  Aligned_cols=173  Identities=14%  Similarity=0.177  Sum_probs=132.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|+++++... .....+..+.+...+.++.++++|++|.+++++++++     +
T Consensus        55 ~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  133 (300)
T PRK06128         55 GRKALITGADSGIGRATAIAFAREGADIALNYLPEE-EQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG  133 (300)
T ss_pred             CCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcc-hHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence            389999999999999999999999999998875322 1122222223322345788999999999999988875     5


Q ss_pred             CCCEEEEccccCCcC-C----CccChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVG-E----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~-~----~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      ++|+||||||..... .    ..+..+..++.|+.++..++..+.+.  ..++||++||.+.|.           +.+..
T Consensus       134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~  202 (300)
T PRK06128        134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQ-----------PSPTL  202 (300)
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccC-----------CCCCc
Confidence            899999999975322 1    22344556778888877766666542  246999999988874           34456


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..|+.||++++.+++.++++   .|+++++|+||+|.|.+
T Consensus       203 ~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~  242 (300)
T PRK06128        203 LDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPL  242 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCC
Confidence            78999999999999999987   58999999999887754

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.1e-24  Score=186.37  Aligned_cols=163  Identities=19%  Similarity=0.215  Sum_probs=129.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +++++||||+||||++++++|+++|++|++++|+..+.+           ...+++++++|++|+++++++++.     +
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   72 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA-----------PIPGVELLELDVTDDASVQAAVDEVIARAG   72 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----------ccCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence            378999999999999999999999999999997532211           123578899999999999998875     5


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||........+    ..+..++.|..++    +.+++.|.+.+.++||++||.+.+.           +.+.
T Consensus        73 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~  141 (270)
T PRK06179         73 RIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFL-----------PAPY  141 (270)
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccC-----------CCCC
Confidence            7999999999865443332    3345566676664    4466667888889999999987763           3445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.+|++.+.+++.++.|   .|+++++++||++.|.+
T Consensus       142 ~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~  182 (270)
T PRK06179        142 MALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNF  182 (270)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccc
Confidence            778999999999999999877   69999999999888754

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.93  E-value=4.1e-25  Score=193.55  Aligned_cols=177  Identities=15%  Similarity=0.122  Sum_probs=128.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC--HHHHHHHhhc---C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSE---N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~---~  144 (267)
                      +++++|||||+|||+++|++|+++|++|++++|+....++..+.+++.. .+.++..+.+|+++  .+.++++.+.   .
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~-~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKY-SKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHC-CCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            4999999999999999999999999999999975543333333332211 12367788999985  3444444433   3


Q ss_pred             CCCEEEEccccCCc--CCCcc----ChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYV--GESTL----DPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       145 ~~D~li~~Ag~~~~--~~~~~----~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      ++|+||||||+...  ....+    ..+..++.|+.+    ++.++|.|.+++.++||++||.+.+...         +.
T Consensus       132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~---------~~  202 (320)
T PLN02780        132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP---------SD  202 (320)
T ss_pred             CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC---------CC
Confidence            56799999998642  12222    223455667766    4557888888888999999998775210         12


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccce
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVAF  256 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~~  256 (267)
                      +....|++||++.+.++++++.|   .|+++++++||.|.|.+..
T Consensus       203 p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~  247 (320)
T PLN02780        203 PLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS  247 (320)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc
Confidence            44789999999999999999988   5899999999999987643

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=1.2e-24  Score=184.60  Aligned_cols=166  Identities=18%  Similarity=0.128  Sum_probs=129.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+++||||+||||++++++|+++|++|+++.+..   ++..+.+++     .++.++.+|++|+++++++++.     ++
T Consensus         8 k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~---~~~~~~l~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (255)
T PRK06463          8 KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA---ENEAKELRE-----KGVFTIKCDVGNRDQVKKSKEVVEKEFGR   79 (255)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCc---HHHHHHHHh-----CCCeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            9999999999999999999999999999887532   222222221     1477899999999999988875     58


Q ss_pred             CCEEEEccccCCcCCCc----cChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGEST----LDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|+||||||.....+..    +..+..++.|+.+    ++.+++.|.+.+.++||++||.+.++.          +.+..
T Consensus        80 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~----------~~~~~  149 (255)
T PRK06463         80 VDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGT----------AAEGT  149 (255)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCC----------CCCCc
Confidence            99999999985433322    2233456677777    566788888777789999999887641          23446


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..|+.||++.+.++++++.|   .|+++++++||+|.|.+
T Consensus       150 ~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~  189 (255)
T PRK06463        150 TFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDM  189 (255)
T ss_pred             cHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCch
Confidence            78999999999999999987   58999999999888755

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.93  E-value=1.1e-24  Score=191.20  Aligned_cols=179  Identities=20%  Similarity=0.209  Sum_probs=130.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+..   ...+..+++...+.++.++.+|++|.++++++++.     +
T Consensus         6 ~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   82 (322)
T PRK07453          6 KGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLK---KAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGK   82 (322)
T ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            489999999999999999999999999999996433   33333333322244688999999999999988875     4


Q ss_pred             CCCEEEEccccCCcC-----CCccChHHHHHHhHHHHHH----HHHHHHHcCC--CEEEEEeccccccCC-CC-C--C--
Q 024488          145 AFDAVMHFAAVAYVG-----ESTLDPLKYYHNITSNTLV----VLESMARHGV--DTLIYSSTCATYGEP-EK-M--P--  207 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~-----~~~~~~~~~~~~~~~~~~~----~l~~~~~~~~--~~iV~vSS~~~~g~~-~~-~--~--  207 (267)
                      ++|+||||||+....     ...+..+..++.|+.++..    +++.|.+.+.  ++||++||.+.+... .+ .  +  
T Consensus        83 ~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~  162 (322)
T PRK07453         83 PLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAP  162 (322)
T ss_pred             CccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCc
Confidence            699999999975331     1223445667888887544    5666666543  699999998765311 00 0  0  


Q ss_pred             --C----------------CCCCCCCCCChHHHHHHHHHHHHHHhhhcC----CCcEEEEeccccc
Q 024488          208 --I----------------TEETPQAPINPYGKAKKMAEDIILDFSKNS----DMAVMILRLVVFF  251 (267)
Q Consensus       208 --~----------------~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e~----g~~~~~vrp~~v~  251 (267)
                        +                .+..+..+...|+.||++.+.+++.+++++    |+++++++||.|+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~  228 (322)
T PRK07453        163 ADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVA  228 (322)
T ss_pred             cchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCccc
Confidence              0                011234567899999999999999998874    7999999999774

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.1e-24  Score=188.64  Aligned_cols=173  Identities=16%  Similarity=0.123  Sum_probs=133.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||+++|++|+++|++|++++|+..   .+.+..+++...+..+.++++|++|.++++++++.     +
T Consensus        40 ~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~---~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  116 (293)
T PRK05866         40 GKRILLTGASSGIGEAAAEQFARRGATVVAVARRED---LLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIG  116 (293)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999997543   23332233322245678899999999999988874     6


Q ss_pred             CCCEEEEccccCCcCCCcc------ChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL------DPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~------~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      ++|+||||||........+      ..+..++.|+.+    ++.+++.|.+.+.++||++||.+.+..          +.
T Consensus       117 ~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~  186 (293)
T PRK05866        117 GVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSE----------AS  186 (293)
T ss_pred             CCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC----------CC
Confidence            8999999999865433222      223456667666    455677787888889999999766531          23


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      +....|++||++.++++++++.|   .|+++++++||.|.|...
T Consensus       187 p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~  230 (293)
T PRK05866        187 PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMI  230 (293)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccc
Confidence            44678999999999999999887   589999999998887543

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.93  E-value=5.6e-25  Score=188.79  Aligned_cols=167  Identities=15%  Similarity=0.032  Sum_probs=125.0

Q ss_pred             cEEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           71 THVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        71 k~vlVTGas--ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      |+++||||+  +|||+++|++|+++|++|++++|+.+..+.+.+..++.   +.. .++++|++|.++++++++.     
T Consensus         6 k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~---~~~-~~~~~Dv~d~~~v~~~~~~i~~~~   81 (274)
T PRK08415          6 KKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQEL---GSD-YVYELDVSKPEHFKSLAESLKKDL   81 (274)
T ss_pred             cEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhc---CCc-eEEEecCCCHHHHHHHHHHHHHHc
Confidence            999999997  89999999999999999999987532122222222222   223 5789999999999988876     


Q ss_pred             CCCCEEEEccccCCc----CCCccC----hHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYV----GESTLD----PLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~----~~~~~~----~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~  211 (267)
                      +++|+||||||+...    .+..+.    .+..++.|+.+    ++.++|.|.+  .++||++||.+..           
T Consensus        82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~-----------  148 (274)
T PRK08415         82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGV-----------  148 (274)
T ss_pred             CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCc-----------
Confidence            789999999997532    222222    23345566555    5557777754  3699999997654           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .+.+.+..|++||+++++|+++++.|   +|+++++|.||+|.|..
T Consensus       149 ~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~  194 (274)
T PRK08415        149 KYVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLA  194 (274)
T ss_pred             cCCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHH
Confidence            13445778999999999999999988   58999999999998854

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.93  E-value=8.6e-25  Score=187.34  Aligned_cols=167  Identities=20%  Similarity=0.143  Sum_probs=130.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +++++|||||||||++++++|+++|++|++++|+.   +.+.+..+++    .++.++.+|++|+++++++++.     +
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~---~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDLDE---ALAKETAAEL----GLVVGGPLDVTDPASFAAFLDAVEADLG   77 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHh----ccceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999998643   2222222222    1477899999999998887765     6


Q ss_pred             CCCEEEEccccCCcCCCccCh----HHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|++|||||+.......+.+    +..++.|+.+    ++.+++.|.+++.++||++||.+.+.           +.+.
T Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  146 (273)
T PRK07825         78 PIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKI-----------PVPG  146 (273)
T ss_pred             CCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccC-----------CCCC
Confidence            899999999986544433333    3345566655    44577888888889999999987763           4456


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++.+.++++++.|   .|+++++|+||++.+.+
T Consensus       147 ~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~  187 (273)
T PRK07825        147 MATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTEL  187 (273)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchh
Confidence            789999999999999999887   58999999999888754

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.93  E-value=1.2e-24  Score=183.62  Aligned_cols=169  Identities=14%  Similarity=0.132  Sum_probs=129.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+.  .++..+.+++.   +.++.++++|+++.+++.++++.     +
T Consensus         5 ~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (248)
T TIGR01832         5 GKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEAL---GRRFLSLTADLSDIEAIKALVDSAVEEFG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhc---CCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            39999999999999999999999999999998642  22233333322   45688999999999999988765     5


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHH----HHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~----~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||........+    ..++.++.|+.+...    +++.|.+++ .++||++||...+.           +.+
T Consensus        80 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~  148 (248)
T TIGR01832        80 HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQ-----------GGI  148 (248)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhcc-----------CCC
Confidence            7999999999865433322    233445667666444    555555554 57999999988774           334


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ....|+.+|++.+.++++++++   +|+++++++||+|.|..
T Consensus       149 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~  190 (248)
T TIGR01832       149 RVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNN  190 (248)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcc
Confidence            4668999999999999999998   48999999999888764

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.93  E-value=6.3e-25  Score=188.23  Aligned_cols=168  Identities=14%  Similarity=0.052  Sum_probs=123.7

Q ss_pred             CcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +|++|||||++  |||+++|++|+++|++|++++|+....+...+..++.   + ...++++|++|.++++++++.    
T Consensus         7 ~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~---g-~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (271)
T PRK06505          7 GKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESL---G-SDFVLPCDVEDIASVDAVFEALEKK   82 (271)
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhc---C-CceEEeCCCCCHHHHHHHHHHHHHH
Confidence            39999999997  9999999999999999999986432211222211221   2 235789999999999988876    


Q ss_pred             -CCCCEEEEccccCCc----CCCccChH----HHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYV----GESTLDPL----KYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~----~~~~~~~~----~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                       +++|+||||||+...    .+..+.+.    ..++.|+.+    ++.++|.|.+  .++||++||.+...         
T Consensus        83 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~---------  151 (271)
T PRK06505         83 WGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTR---------  151 (271)
T ss_pred             hCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccc---------
Confidence             689999999997532    12222222    333445444    4456777763  37999999976541         


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                        +.+.+..|++||++++.|++.++.|   +|++++.|.||+|.|..
T Consensus       152 --~~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~  196 (271)
T PRK06505        152 --VMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLA  196 (271)
T ss_pred             --cCCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccc
Confidence              3445778999999999999999998   58999999999998854

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.6e-24  Score=188.66  Aligned_cols=177  Identities=12%  Similarity=0.024  Sum_probs=129.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC-------CcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhh
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG-------NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS  142 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~  142 (267)
                      +|+++||||++|||+++|++|+++|++|++++|+...       .+.+.+..+++...+.++.++++|++|+++++++++
T Consensus         8 ~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~   87 (305)
T PRK08303          8 GKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVE   87 (305)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence            3999999999999999999999999999999986421       122222223332334567889999999999998887


Q ss_pred             c-----CCCCEEEEcc-ccCC----cCCCccCh----HHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCC
Q 024488          143 E-----NAFDAVMHFA-AVAY----VGESTLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPE  204 (267)
Q Consensus       143 ~-----~~~D~li~~A-g~~~----~~~~~~~~----~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~  204 (267)
                      .     +++|+||||| |...    ..+..+..    .+.++.|+.+    ++.++|.|.+.+.++||++||....-.. 
T Consensus        88 ~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~-  166 (305)
T PRK08303         88 RIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNA-  166 (305)
T ss_pred             HHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccC-
Confidence            6     6899999999 7531    12222222    2234445544    5667888877767899999995442100 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          205 KMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       205 ~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                             .+......|++||+++.+|+++++.|   .|++++.|.||+|.|.+
T Consensus       167 -------~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~  212 (305)
T PRK08303        167 -------THYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEM  212 (305)
T ss_pred             -------cCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHH
Confidence                   01223568999999999999999998   57999999999998864

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.93  E-value=9.8e-25  Score=185.08  Aligned_cols=166  Identities=16%  Similarity=0.109  Sum_probs=125.8

Q ss_pred             CcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGas--ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +|+++||||+  +|||+++|++|+++|++|++++|+.    +..+.++++.  ...+.++++|++|+++++++++.    
T Consensus         7 ~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~----~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~   80 (252)
T PRK06079          7 GKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND----RMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKER   80 (252)
T ss_pred             CCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch----HHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHH
Confidence            3999999999  8999999999999999999998642    2333334432  23578899999999999988765    


Q ss_pred             -CCCCEEEEccccCCc----CCCccCh----HHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYV----GESTLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~----~~~~~~~----~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                       +++|+||||||...+    .+..+.+    +..++.|+.+    ++.++|.|.+  .++||++||.+..          
T Consensus        81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~----------  148 (252)
T PRK06079         81 VGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSE----------  148 (252)
T ss_pred             hCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCcc----------
Confidence             689999999997542    2222222    2334455554    4456666643  4799999997654          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                       .+.+.+..|++||++.+.++++++.|   .|++++.|.||.|.|.+
T Consensus       149 -~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~  194 (252)
T PRK06079        149 -RAIPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLA  194 (252)
T ss_pred             -ccCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccc
Confidence             13455789999999999999999998   58999999999998864

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.93  E-value=1.3e-24  Score=184.29  Aligned_cols=171  Identities=16%  Similarity=0.144  Sum_probs=131.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+|+||++++++|+++|++|++++|+..   +..+..+++...+.++.++++|++|.++++++++.     +
T Consensus        10 ~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (255)
T PRK07523         10 GRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPA---KLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIG   86 (255)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            499999999999999999999999999999987543   22223333322245688899999999999998875     5


Q ss_pred             CCCEEEEccccCCcCCCccCh----HHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||.....+..+.+    ++.+..|+.++..    +.+.|.+++.++||++||.....           +.+.
T Consensus        87 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------~~~~  155 (255)
T PRK07523         87 PIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL-----------ARPG  155 (255)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc-----------CCCC
Confidence            799999999986554444333    3344566666544    45555556678999999976542           4456


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.+|.+.+.+++.++.+   +|+++++++||.+.+..
T Consensus       156 ~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~  196 (255)
T PRK07523        156 IAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPL  196 (255)
T ss_pred             CccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCch
Confidence            789999999999999999986   68999999999777654

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.93  E-value=1.4e-24  Score=183.31  Aligned_cols=171  Identities=18%  Similarity=0.147  Sum_probs=129.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEE-ecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      +++++||||+|+||++++++|+++|++|+++ .|+.   +...+..+++...+.++.++.+|++|++++++++++     
T Consensus         4 ~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (250)
T PRK08063          4 GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSR---KAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF   80 (250)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH---HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3899999999999999999999999998874 4432   222233333323355788999999999999988875     


Q ss_pred             CCCCEEEEccccCCcCCCccChHH----HHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTLDPLK----YYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +++|+||||||.....+..+.+.+    .++.|..++    +.+++.|.+++.++||++||...+.           +.+
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~  149 (250)
T PRK08063         81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIR-----------YLE  149 (250)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcc-----------CCC
Confidence            579999999997654444333333    344565554    4456666667778999999976652           445


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...|+.+|++.+.++++++.+   .++++++++||.+.+..
T Consensus       150 ~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~  191 (250)
T PRK08063        150 NYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDA  191 (250)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCch
Confidence            6789999999999999999887   68999999999887754

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.93  E-value=6.2e-25  Score=190.02  Aligned_cols=183  Identities=18%  Similarity=0.127  Sum_probs=143.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +++++||||++|||+++|++|+.+|++|++..|+....+++.+.+.+ ......+.++++|++|.++|+++.+.     .
T Consensus        35 ~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~-~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~  113 (314)
T KOG1208|consen   35 GKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQK-GKANQKIRVIQLDLSSLKSVRKFAEEFKKKEG  113 (314)
T ss_pred             CcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh-cCCCCceEEEECCCCCHHHHHHHHHHHHhcCC
Confidence            38999999999999999999999999999999766444444444444 13355788899999999999998876     6


Q ss_pred             CCCEEEEccccCCcCC--CccChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCC-CCCC-CCC
Q 024488          145 AFDAVMHFAAVAYVGE--STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPIT-EETP-QAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~--~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~-e~~~-~~~  216 (267)
                      ++|++|||||++..+.  ..+..|..+.+|+.+    +..++|.|++...+|||++||.......+-..++ +... ...
T Consensus       114 ~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~~~~  193 (314)
T KOG1208|consen  114 PLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKLYSS  193 (314)
T ss_pred             CccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccCccc
Confidence            8999999999986654  446678888999888    6668888888777899999997761111111122 2222 334


Q ss_pred             CChHHHHHHHHHHHHHHhhhcC--CCcEEEEeccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKNS--DMAVMILRLVVFFTL  253 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e~--g~~~~~vrp~~v~~~  253 (267)
                      ...|+.||.+...++..++++.  |+.++.++||+|.+.
T Consensus       194 ~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~  232 (314)
T KOG1208|consen  194 DAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTT  232 (314)
T ss_pred             hhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCccccc
Confidence            4479999999999999999883  799999999988876

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.6e-24  Score=183.41  Aligned_cols=170  Identities=19%  Similarity=0.158  Sum_probs=126.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc------
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (267)
                      +|+++||||+||||++++++|+++|++|+++++  ++.+...+...++...+..+..+.+|+++.+++..+++.      
T Consensus         4 ~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          4 GKVALVTGASRGIGRAIAKRLANDGALVAIHYG--NRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcC--CCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            389999999999999999999999999998753  222233333333333345678899999999888766643      


Q ss_pred             -----CCCCEEEEccccCCcCCCccCh----HHHHHHhHHHHHHH----HHHHHHcCCCEEEEEeccccccCCCCCCCCC
Q 024488          144 -----NAFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       144 -----~~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~~----l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                           .++|+||||||........+.+    +..++.|+.++..+    ++.|.+  .++||++||.+.+.         
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~---------  150 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRI---------  150 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--CCeEEEECCccccc---------
Confidence                 2799999999975433333333    34455777775554    444433  37999999987763         


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                        +.+....|+.||++++.+++.++.|   .|+++++|.||+|.|..
T Consensus       151 --~~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~  195 (252)
T PRK12747        151 --SLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDM  195 (252)
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCch
Confidence              4455789999999999999999987   58999999999888865

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.93  E-value=1.1e-24  Score=187.07  Aligned_cols=171  Identities=18%  Similarity=0.173  Sum_probs=132.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+..   ...+..+++...+.++.++++|++|.++++.+++.     +
T Consensus        10 ~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (278)
T PRK08277         10 GKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQE---KAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG   86 (278)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999997533   22233333322345688999999999999888765     6


Q ss_pred             CCCEEEEccccCCcCC---------------C----ccChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEecccccc
Q 024488          145 AFDAVMHFAAVAYVGE---------------S----TLDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYG  201 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~---------------~----~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g  201 (267)
                      ++|+||||||...+..               .    .++.+..++.|+.+.    +.+++.|.+.+.++||++||.+.+.
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~  166 (278)
T PRK08277         87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT  166 (278)
T ss_pred             CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC
Confidence            8999999999643221               1    122234455566553    4577888877778999999988873


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          202 EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       202 ~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                                 +.++...|+.||++.+.++++++.+   .|+++++|+||+|.+..
T Consensus       167 -----------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~  211 (278)
T PRK08277        167 -----------PLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQ  211 (278)
T ss_pred             -----------CCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcc
Confidence                       4556788999999999999999998   48999999999888764

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.93  E-value=1.8e-24  Score=183.40  Aligned_cols=171  Identities=16%  Similarity=0.111  Sum_probs=129.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+..   ...+..+++...+.++..+.+|++|+++++++++.     +
T Consensus         9 ~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (254)
T PRK08085          9 GKNILITGSAQGIGFLLATGLAEYGAEIIINDITAE---RAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIG   85 (254)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHH---HHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            489999999999999999999999999999996533   33333333322244678899999999999988765     5


Q ss_pred             CCCEEEEccccCCcCCCccChH----HHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPL----KYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~----~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||.....+..+.+.    ..++.|+.+    ++.+++.|.+++.++||++||.....           +.++
T Consensus        86 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~  154 (254)
T PRK08085         86 PIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSEL-----------GRDT  154 (254)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhcc-----------CCCC
Confidence            7999999999764433333333    345556555    34456666666678999999965431           3445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.+|++.+.++++++.+   .|+++++|+||++.+..
T Consensus       155 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~  195 (254)
T PRK08085        155 ITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEM  195 (254)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcc
Confidence            779999999999999999988   58999999999887754

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.6e-24  Score=183.72  Aligned_cols=173  Identities=15%  Similarity=0.184  Sum_probs=129.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+..   +..+..+++...+.++..+.+|++|++++++++++     +
T Consensus         9 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T PRK05867          9 GKRALITGASTGIGKRVALAYVEAGAQVAIAARHLD---ALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG   85 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHH---HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            399999999999999999999999999999997543   33333333323345788899999999999988875     6


Q ss_pred             CCCEEEEccccCCcCCCccChHH----HHHHhHHH----HHHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLK----YYHNITSN----TLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~----~~~~~~~~----~~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||.....+..+.+.+    .++.|+.+    ++.+++.|.+++ .++||++||.+..-.         ....
T Consensus        86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------~~~~  156 (253)
T PRK05867         86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII---------NVPQ  156 (253)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC---------CCCC
Confidence            89999999998654443333333    34566655    444666666654 468999999665310         0112


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ....|+.+|++++.+++++++|   .|+++++|+||+|.|..
T Consensus       157 ~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~  198 (253)
T PRK05867        157 QVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTEL  198 (253)
T ss_pred             CccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcc
Confidence            3568999999999999999988   58999999999888754

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.93  E-value=2.4e-25  Score=183.72  Aligned_cols=186  Identities=28%  Similarity=0.441  Sum_probs=159.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +.++||||.||||++.+..+...  .++.+.++...-...  .+.+++. ...++..+++.|+.+...+.-++....+|.
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~--~~~l~~~-~n~p~ykfv~~di~~~~~~~~~~~~~~id~   83 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN--LKNLEPV-RNSPNYKFVEGDIADADLVLYLFETEEIDT   83 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc--cchhhhh-ccCCCceEeeccccchHHHHhhhccCchhh
Confidence            78999999999999999999986  577777765332211  2333333 234588999999999999999988889999


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEEeccccccCCCCCCCC-CCCCCCCCChHHHHHHH
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYGEPEKMPIT-EETPQAPINPYGKAKKM  226 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~iV~vSS~~~~g~~~~~~~~-e~~~~~~~~~Y~~sK~a  226 (267)
                      |+|.|+......+..++.+....|+.+|..+++..+.. +..++|++||-.+||+.+..... |.+...|.++|++||+|
T Consensus        84 vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaA  163 (331)
T KOG0747|consen   84 VIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAA  163 (331)
T ss_pred             hhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHH
Confidence            99999998777777788889999999999999999888 57899999999999998877666 88999999999999999


Q ss_pred             HHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCCCC
Q 024488          227 AEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTDRR  266 (267)
Q Consensus       227 ~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~~~  266 (267)
                      +|++.++|..+++++++++|.+       |||||++.+..
T Consensus       164 aE~~v~Sy~~sy~lpvv~~R~n-------nVYGP~q~~~k  196 (331)
T KOG0747|consen  164 AEMLVRSYGRSYGLPVVTTRMN-------NVYGPNQYPEK  196 (331)
T ss_pred             HHHHHHHHhhccCCcEEEEecc-------CccCCCcChHH
Confidence            9999999999999999999999       99999998653

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.93  E-value=1.8e-24  Score=183.89  Aligned_cols=170  Identities=20%  Similarity=0.158  Sum_probs=132.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+|+||++++++|+++|++|++++|++...++..   +++...+.++.++++|++|.+++++++++     +
T Consensus         7 ~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (262)
T PRK13394          7 GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVA---DEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFG   83 (262)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHH---HHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            489999999999999999999999999999997543333333   33322345688899999999999888775     5


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHH----HHHHHHHH-HHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSN----TLVVLESM-ARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~----~~~~l~~~-~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||........+    ..+..++.|+.+    ++.+++.| .+.+.++||++||...+.           +.+
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~-----------~~~  152 (262)
T PRK13394         84 SVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHE-----------ASP  152 (262)
T ss_pred             CCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcC-----------CCC
Confidence            6999999999865433222    234445677777    77788888 666778999999965542           334


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      +...|+.+|++.+.+++.++++   .++++++++||.+.+.
T Consensus       153 ~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~  193 (262)
T PRK13394        153 LKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTP  193 (262)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccch
Confidence            5678999999999999999887   5899999999966654

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.93  E-value=2.6e-24  Score=183.60  Aligned_cols=170  Identities=15%  Similarity=0.041  Sum_probs=131.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+++||++++++|+++|++|++++|+..   +..+..+++...+.++.++++|++|.+++++++++     +
T Consensus        10 ~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (265)
T PRK07097         10 GKIALITGASYGIGFAIAKAYAKAGATIVFNDINQE---LVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVG   86 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHH---HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            489999999999999999999999999999986543   33333333323345788999999999999998876     6


Q ss_pred             CCCEEEEccccCCcCCCccChHHH----HHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLKY----YHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~~----~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||.....+..+.+.+.    ++.|+.+    ++.+++.|.+.+.++||++||.....           +.++
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  155 (265)
T PRK07097         87 VIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSEL-----------GRET  155 (265)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccC-----------CCCC
Confidence            799999999986544433333333    4455555    34577778777788999999965431           3345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      ...|+.+|++++.++++++++   .|++++.|+||.|.+.
T Consensus       156 ~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  195 (265)
T PRK07097        156 VSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATP  195 (265)
T ss_pred             CccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEecccccc
Confidence            788999999999999999998   5899999999988774

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.4e-24  Score=186.02  Aligned_cols=173  Identities=17%  Similarity=0.100  Sum_probs=130.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC------CCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS------RGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~  143 (267)
                      +|+++||||++|||++++++|+++|++|++++++.      +..+.+.+..+++...+.++.++.+|++|.++++++++.
T Consensus         6 ~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~   85 (286)
T PRK07791          6 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDA   85 (286)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHH
Confidence            39999999999999999999999999999998653      111333344444433355788899999999999888865


Q ss_pred             -----CCCCEEEEccccCCcCCCcc----ChHHHHHHhHHHH----HHHHHHHHHcC------CCEEEEEeccccccCCC
Q 024488          144 -----NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSNT----LVVLESMARHG------VDTLIYSSTCATYGEPE  204 (267)
Q Consensus       144 -----~~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~------~~~iV~vSS~~~~g~~~  204 (267)
                           +++|+||||||+.......+    ..+..++.|+.++    +.+++.|.+..      .++||++||.+.+.   
T Consensus        86 ~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~---  162 (286)
T PRK07791         86 AVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ---  162 (286)
T ss_pred             HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc---
Confidence                 68999999999865433222    2334456666664    45667676542      26999999976652   


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          205 KMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       205 ~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                              +.+....|+.||++++.+++.++.|   .|++++.|.|| +.|..
T Consensus       163 --------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~  206 (286)
T PRK07791        163 --------GSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRM  206 (286)
T ss_pred             --------CCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCc
Confidence                    4455789999999999999999998   68999999999 55543

>PRK06182 short chain dehydrogenase; Validated

Probab=99.93  E-value=1e-24  Score=186.89  Aligned_cols=165  Identities=17%  Similarity=0.077  Sum_probs=129.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+.   +++.+ +.   .  ..+.++.+|++|.++++++++.     +
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~---~~l~~-~~---~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~~   73 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRV---DKMED-LA---S--LGVHPLSLDVTDEASIKAAVDTIIAEEG   73 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH---HHHHH-HH---h--CCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            38999999999999999999999999999998643   22211 11   1  2478899999999999888874     5


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||.....+..    +..+..++.|+.+    ++.+++.|++.+.++||++||.+.+.           +.+.
T Consensus        74 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~-----------~~~~  142 (273)
T PRK06182         74 RIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKI-----------YTPL  142 (273)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcC-----------CCCC
Confidence            899999999986544322    2334556667666    66788889888888999999976542           2334


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++.+.+++.++.|   .|+++++++||+|.|..
T Consensus       143 ~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  183 (273)
T PRK06182        143 GAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEW  183 (273)
T ss_pred             ccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCccccc
Confidence            568999999999999999876   68999999999887753

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.1e-24  Score=182.84  Aligned_cols=171  Identities=18%  Similarity=0.209  Sum_probs=132.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+|+||++++++|+++|++|++++|+....++..+.++   ..+.++.++.+|++|.++++++++.     +
T Consensus         7 ~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   83 (253)
T PRK06172          7 GKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIR---EAGGEALFVACDVTRDAEVKALVEQTIAAYG   83 (253)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH---hcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            3999999999999999999999999999999975433222223222   2345788999999999999888765     5


Q ss_pred             CCCEEEEccccCCcCC-----CccChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGE-----STLDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~-----~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||......     ..++.++.++.|+.+.    +.+++.+.+.+.++||++||...+.           +.+
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~-----------~~~  152 (253)
T PRK06172         84 RLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLG-----------AAP  152 (253)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcc-----------CCC
Confidence            8899999999753221     2233344556676664    4566777777778999999988774           455


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ....|+.+|++.+.+++.++.|   .|+++++++||.|.|..
T Consensus       153 ~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~  194 (253)
T PRK06172        153 KMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDM  194 (253)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChh
Confidence            6789999999999999999988   47999999999888754

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3e-24  Score=180.55  Aligned_cols=172  Identities=19%  Similarity=0.180  Sum_probs=132.3

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      .||+++||||+|+||++++++|+++|++|++++|+....+   +..+++...+.++.++.+|++|.+++.++++.     
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALE---ALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQF   81 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999997543322   22222222245788999999999998888765     


Q ss_pred             CCCCEEEEccccCCcCCCcc----ChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +++|+||||||........+    ..+..++.|+.+    ++.+++.|.+.+.++||++||.+.++           +.+
T Consensus        82 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~  150 (241)
T PRK07454         82 GCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARN-----------AFP  150 (241)
T ss_pred             CCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCc-----------CCC
Confidence            57999999999764433222    233445566665    44566777777778999999988774           445


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...|+.+|++.+.+++.++++   .|+++++|+||.+.+..
T Consensus       151 ~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~  192 (241)
T PRK07454        151 QWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPL  192 (241)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCc
Confidence            5788999999999999999876   58999999999887754

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.9e-24  Score=182.69  Aligned_cols=161  Identities=20%  Similarity=0.209  Sum_probs=126.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |++|||||+||||++++++|+++|++|++++|+....            ...++.++++|++|.+++++++++     ++
T Consensus        10 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~------------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (260)
T PRK06523         10 KRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD------------LPEGVEFVAADLTTAEGCAAVARAVLERLGG   77 (260)
T ss_pred             CEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh------------cCCceeEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            9999999999999999999999999999999753210            123578899999999999877764     57


Q ss_pred             CCEEEEccccCCc--CC----CccChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC-
Q 024488          146 FDAVMHFAAVAYV--GE----STLDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-  214 (267)
Q Consensus       146 ~D~li~~Ag~~~~--~~----~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~-  214 (267)
                      +|+||||||....  ..    ..+..+..++.|+.++    +.+++.|.+.+.++||++||...+.           +. 
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~-----------~~~  146 (260)
T PRK06523         78 VDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRL-----------PLP  146 (260)
T ss_pred             CCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccC-----------CCC
Confidence            9999999996421  11    2233344566677664    4567778777778999999977653           22 


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .+...|+.+|++++.+++.++.+   .|+++++|+||+|.|..
T Consensus       147 ~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~  189 (260)
T PRK06523        147 ESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEA  189 (260)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcc
Confidence            25788999999999999999987   58999999999887754

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.93  E-value=3.2e-24  Score=181.92  Aligned_cols=169  Identities=12%  Similarity=0.108  Sum_probs=130.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|+++++..  .++..+.+++   .+.++.++++|++|.+++++++++     +
T Consensus        10 ~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (253)
T PRK08993         10 GKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE--PTETIEQVTA---LGRRFLSLTADLRKIDGIPALLERAVAEFG   84 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc--hHHHHHHHHh---cCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            39999999999999999999999999999887532  2222233332   245688899999999999998876     6


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHHHH----HHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTL----VVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~----~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||........    ++.++.++.|+.+..    .+++.|.+++ .++||++||...+.           +.+
T Consensus        85 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  153 (253)
T PRK08993         85 HIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQ-----------GGI  153 (253)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhcc-----------CCC
Confidence            899999999986433322    334455667777644    4566666654 47999999987774           334


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ....|+.+|++.+.+++.++.|   .|++++.++||++.|..
T Consensus       154 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~  195 (253)
T PRK08993        154 RVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNN  195 (253)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcc
Confidence            4678999999999999999988   68999999999998854

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4e-24  Score=183.73  Aligned_cols=167  Identities=17%  Similarity=0.153  Sum_probs=129.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+..   ...+ +.+.  .+.++..+.+|++|.+++.++++.     +
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~---~~~~-l~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   77 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEA---ARAD-FEAL--HPDRALARLLDVTDFDAIDAVVADAEATFG   77 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHH---HHHH-HHhh--cCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence            489999999999999999999999999999997432   2211 1111  134678899999999999888875     5


Q ss_pred             CCCEEEEccccCCcCCCccCh----HHHHHHhHHHHHHHHH----HHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVVLE----SMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~~l~----~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||........+.+    +..++.|+.++.++++    .|++++.++||++||.+.+.           +.++
T Consensus        78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~-----------~~~~  146 (277)
T PRK06180         78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLI-----------TMPG  146 (277)
T ss_pred             CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccC-----------CCCC
Confidence            799999999986544433333    3446778877665544    46666678999999977663           3456


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      ...|+.+|++++.++++++.+   +|+++++++||.|.|.
T Consensus       147 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~  186 (277)
T PRK06180        147 IGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTD  186 (277)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccC
Confidence            789999999999999999987   5899999999977664

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.9e-24  Score=183.83  Aligned_cols=171  Identities=18%  Similarity=0.196  Sum_probs=133.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+++||||+||||++++++|+++|++|++++|+..   ...+...++...+.++.++.+|++|++++.++++.     ++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   77 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEE---GGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGG   77 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            47999999999999999999999999999996443   33333333333355788999999999999888764     57


Q ss_pred             CCEEEEccccCCcCCCccChHH----HHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~----~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|+||||||........+.+.+    .++.|+.+    ++.+++.|.+.+.++||++||.+.+.           +.+..
T Consensus        78 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~~~  146 (270)
T PRK05650         78 IDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLM-----------QGPAM  146 (270)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcC-----------CCCCc
Confidence            9999999998655444433333    34556544    45578888888788999999987763           45567


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ..|+.+|++.++++++++.|   .|+++++++||.+.+.+.
T Consensus       147 ~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~  187 (270)
T PRK05650        147 SSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLL  187 (270)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcc
Confidence            89999999999999999998   589999999998887543

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.5e-24  Score=183.82  Aligned_cols=165  Identities=16%  Similarity=0.140  Sum_probs=128.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |++|||||+||||++++++|+++|++|++++|+.   +...+..++.   +.++.++++|++|.+++++++++     ++
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~---~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRP---DALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAALGR   76 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            7899999999999999999999999999998643   2222211221   34688999999999999888764     57


Q ss_pred             CCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHHHHHH----HHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~~l~~----~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|+||||||........+    ..+..++.|+.++.+++..    |.+++.++||++||.+...           +.++.
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~  145 (276)
T PRK06482         77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQI-----------AYPGF  145 (276)
T ss_pred             CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccccc-----------CCCCC
Confidence            999999999865544332    2345666788887665555    5666778999999976542           34567


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFT  252 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~  252 (267)
                      +.|+.||++.+.++++++.+   +|++++++|||.+.+
T Consensus       146 ~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t  183 (276)
T PRK06482        146 SLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPART  183 (276)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccc
Confidence            89999999999999999887   699999999996654

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.93  E-value=9.7e-25  Score=189.69  Aligned_cols=159  Identities=19%  Similarity=0.223  Sum_probs=134.0

Q ss_pred             EEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEEcc
Q 024488           74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFA  153 (267)
Q Consensus        74 lVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li~~A  153 (267)
                      |||||||+||++++++|++.|++|+++.+.                       ..+|++|.++++++++..++|+|||+|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-----------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A   57 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-----------------------KELDLTRQADVEAFFAKEKPTYVILAA   57 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc-----------------------ccCCCCCHHHHHHHHhccCCCEEEEee
Confidence            699999999999999999999988765421                       148999999999998877789999999


Q ss_pred             ccCCc-CCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCC----CCCCCC-hHHHHHHHH
Q 024488          154 AVAYV-GESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET----PQAPIN-PYGKAKKMA  227 (267)
Q Consensus       154 g~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~----~~~~~~-~Y~~sK~a~  227 (267)
                      +.... ......+.+.++.|..++.++++.+.+.+.+++|++||..+|+.....+++|++    +..|.+ .|+.||.++
T Consensus        58 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~  137 (306)
T PLN02725         58 AKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAG  137 (306)
T ss_pred             eeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHH
Confidence            97532 123345677889999999999999999988899999999999876667788875    333433 599999999


Q ss_pred             HHHHHHhhhcCCCcEEEEeccccccccceeecCCC
Q 024488          228 EDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       228 e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      |.+++.+.++++++++++||+       ++|||+.
T Consensus       138 e~~~~~~~~~~~~~~~~~R~~-------~vyG~~~  165 (306)
T PLN02725        138 IKMCQAYRIQYGWDAISGMPT-------NLYGPHD  165 (306)
T ss_pred             HHHHHHHHHHhCCCEEEEEec-------ceeCCCC
Confidence            999999988889999999999       8888874

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.93  E-value=2.3e-24  Score=183.74  Aligned_cols=168  Identities=13%  Similarity=0.074  Sum_probs=124.1

Q ss_pred             cEEEEEcC--CChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           71 THVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        71 k~vlVTGa--sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      |+++||||  ++|||+++|++|+++|++|++++|..+..    +.++++....+....+++|++|.++++++++.     
T Consensus         7 k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (261)
T PRK08690          7 KKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLE----ERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW   82 (261)
T ss_pred             cEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHH----HHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence            89999997  67999999999999999999987643222    22233322222356789999999999998875     


Q ss_pred             CCCCEEEEccccCCcC----C-CccChHHHH----HHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVG----E-STLDPLKYY----HNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~----~-~~~~~~~~~----~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                      +++|+||||||+....    + .++.+.+.|    +.|+.+    ++.++|.|.++ .++||++||.+.+.         
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~---------  152 (261)
T PRK08690         83 DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVR---------  152 (261)
T ss_pred             CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEccccccc---------
Confidence            6899999999986431    1 122223333    344443    34566777554 37899999977652         


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                        +.+.+..|++||++++.+++.++.|   +|++++.|.||+|.|..
T Consensus       153 --~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~  197 (261)
T PRK08690        153 --AIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLA  197 (261)
T ss_pred             --CCCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchh
Confidence              4456788999999999999999887   68999999999998854

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4.9e-24  Score=178.05  Aligned_cols=166  Identities=10%  Similarity=0.110  Sum_probs=125.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C-
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N-  144 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~-  144 (267)
                      |+++||||++|||++++++|+++|++|++++|+..   .+.+..+++...+.++..+.+|++|+++++++++.     + 
T Consensus         6 k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~---~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          6 SIILITSAGSVLGRTISCHFARLGATLILCDQDQS---ALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             eEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHH---HHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            89999999999999999999999999999986543   33333333333345678899999999999988765     5 


Q ss_pred             CCCEEEEccccCCc-CCCccChHHHH----HHhHHH----HHHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYV-GESTLDPLKYY----HNITSN----TLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       145 ~~D~li~~Ag~~~~-~~~~~~~~~~~----~~~~~~----~~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      ++|++|||||.... ....+.+.+.+    +.|..+    ++.+++.|.+++ .+.||++||...+              
T Consensus        83 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~--------------  148 (227)
T PRK08862         83 APDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH--------------  148 (227)
T ss_pred             CCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC--------------
Confidence            89999999985432 23333333333    333333    445678887654 5799999995432              


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      ++...|+.||++.++|++.++.|   ++++++.|.||++.|.
T Consensus       149 ~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        149 QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence            23678999999999999999998   6899999999988775

>PRK07985 oxidoreductase; Provisional

Probab=99.93  E-value=3.6e-24  Score=185.63  Aligned_cols=172  Identities=18%  Similarity=0.172  Sum_probs=128.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+++||||+||||++++++|+++|++|++.+|... .+...+..+.....+.++.++.+|++|.+++++++++     ++
T Consensus        50 k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  128 (294)
T PRK07985         50 RKALVTGGDSGIGRAAAIAYAREGADVAISYLPVE-EEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGG  128 (294)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcc-hhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            89999999999999999999999999998875322 1122222122212245688899999999999888775     68


Q ss_pred             CCEEEEccccCCc-CC----CccChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYV-GE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (267)
Q Consensus       146 ~D~li~~Ag~~~~-~~----~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~  218 (267)
                      +|++|||||.... ..    ..++.++.++.|+.++..++..+...  ..++||++||.+.+.           +.+...
T Consensus       129 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~-----------~~~~~~  197 (294)
T PRK07985        129 LDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQ-----------PSPHLL  197 (294)
T ss_pred             CCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhcc-----------CCCCcc
Confidence            9999999997421 11    22334556677887766655554331  247999999988773           344567


Q ss_pred             hHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          219 PYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       219 ~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .|+.+|++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       198 ~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~  236 (294)
T PRK07985        198 DYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL  236 (294)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccc
Confidence            8999999999999999988   58999999999777754

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.93  E-value=3.3e-24  Score=182.43  Aligned_cols=168  Identities=15%  Similarity=0.049  Sum_probs=125.0

Q ss_pred             CcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGas--ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +|+++||||+  +|||+++|++|+++|++|++++|+.+..+.+.+..++.    ....++++|++|.++++++++.    
T Consensus        10 ~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~   85 (258)
T PRK07533         10 GKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL----DAPIFLPLDVREPGQLEAVFARIAEE   85 (258)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh----ccceEEecCcCCHHHHHHHHHHHHHH
Confidence            3999999998  59999999999999999999997543222222222222    2356789999999999988876    


Q ss_pred             -CCCCEEEEccccCCc----CCCcc----ChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYV----GESTL----DPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~----~~~~~----~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                       +++|+||||||....    ....+    ..+..++.|+.+    ++.++|.|.+  .++||++||.+..          
T Consensus        86 ~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~----------  153 (258)
T PRK07533         86 WGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAE----------  153 (258)
T ss_pred             cCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccc----------
Confidence             689999999997532    12222    223445566655    4556777743  4799999996553          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                       .+.+.+..|++||++++.++++++.|   +|++++.|.||+|.|.+
T Consensus       154 -~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~  199 (258)
T PRK07533        154 -KVVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRA  199 (258)
T ss_pred             -cCCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChh
Confidence             13445778999999999999999988   58999999999998865

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.93  E-value=2e-24  Score=194.04  Aligned_cols=172  Identities=26%  Similarity=0.316  Sum_probs=151.0

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      .+|+||||||+|-||+++++++++.+. +++++++++-+.....+.+++..+ ..+..++-+|+.|.+.+..++++.++|
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~-~~~~~~~igdVrD~~~~~~~~~~~kvd  327 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP-ELKLRFYIGDVRDRDRVERAMEGHKVD  327 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC-CcceEEEecccccHHHHHHHHhcCCCc
Confidence            349999999999999999999999985 788888776666666666665443 457888999999999999999988899


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (267)
                      +|+|.|+.-+.+..+.+|.+.+++|+.||.++++++.+++.+++|++||              |....|.+.||+||+.+
T Consensus       328 ~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iST--------------DKAV~PtNvmGaTKr~a  393 (588)
T COG1086         328 IVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLIST--------------DKAVNPTNVMGATKRLA  393 (588)
T ss_pred             eEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEec--------------CcccCCchHhhHHHHHH
Confidence            9999999999999999999999999999999999999999999999999              33456799999999999


Q ss_pred             HHHHHHhhhc-C--CCcEEEEeccccccccceeecCCC
Q 024488          228 EDIILDFSKN-S--DMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       228 e~l~~~~a~e-~--g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      |.++++++.+ .  +.+++++|+|       ||.|...
T Consensus       394 E~~~~a~~~~~~~~~T~f~~VRFG-------NVlGSrG  424 (588)
T COG1086         394 EKLFQAANRNVSGTGTRFCVVRFG-------NVLGSRG  424 (588)
T ss_pred             HHHHHHHhhccCCCCcEEEEEEec-------ceecCCC
Confidence            9999999875 3  4889999999       8888653

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.93  E-value=5e-24  Score=184.90  Aligned_cols=169  Identities=20%  Similarity=0.152  Sum_probs=129.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+.   +++.+..+++. .+..+..+.+|++|.+++++++++     +
T Consensus         9 gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~---~~l~~~~~~l~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (296)
T PRK05872          9 GKVVVVTGAARGIGAELARRLHARGAKLALVDLEE---AELAALAAELG-GDDRVLTVVADVTDLAAMQAAAEEAVERFG   84 (296)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHhc-CCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999999643   33333333332 234566778999999999888765     6


Q ss_pred             CCCEEEEccccCCcCCCccCh----HHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+....+..+..    ++.++.|+.++..    +++.|.+. .++||++||.+.+.           +.+.
T Consensus        85 ~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~-----------~~~~  152 (296)
T PRK05872         85 GIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFA-----------AAPG  152 (296)
T ss_pred             CCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcC-----------CCCC
Confidence            899999999986544433322    3445667666444    55656554 47999999988763           4455


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++++.+++.++.|   .|+++++++||++.|..
T Consensus       153 ~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  193 (296)
T PRK05872        153 MAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDL  193 (296)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchh
Confidence            789999999999999999877   68999999999887754

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.93  E-value=2.9e-24  Score=182.80  Aligned_cols=172  Identities=17%  Similarity=0.104  Sum_probs=127.5

Q ss_pred             CcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGas--ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +|+++||||+  +|||+++|++|+++|++|++++++.+. .+..+.++++.....++.++++|++|+++++++++.    
T Consensus         6 ~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          6 GKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEK-GRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCccc-chHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            3899999986  899999999999999999988764321 122233333322233567889999999999988876    


Q ss_pred             -CCCCEEEEccccCCc----CCCccCh----HHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYV----GESTLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~----~~~~~~~----~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                       +++|+||||||+...    .+..+.+    +..++.|+.+    ++.++|.|.+  .++||++||.+..          
T Consensus        85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~----------  152 (258)
T PRK07370         85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGV----------  152 (258)
T ss_pred             cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccc----------
Confidence             689999999997532    2222222    3344555555    4557777764  3799999997654          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                       .+.+....|++||++++.+++.++.|   .|+++++|.||+|.|...
T Consensus       153 -~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~  199 (258)
T PRK07370        153 -RAIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLAS  199 (258)
T ss_pred             -cCCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchh
Confidence             24456789999999999999999988   579999999999988653

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.92  E-value=5.4e-24  Score=181.36  Aligned_cols=167  Identities=20%  Similarity=0.191  Sum_probs=127.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+..   +..+..+++   +.++.++++|++|.++++++++.     +
T Consensus         6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   79 (261)
T PRK08265          6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDAD---NGAAVAASL---GERARFIATDITDDAAIERAVATVVARFG   79 (261)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            389999999999999999999999999999997532   233333332   34688899999999999888875     6


Q ss_pred             CCCEEEEccccCCcCCCc---cChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST---LDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~---~~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      ++|+||||||.......+   +..++.++.|+.++    +.+++.|. ++.++||++||.+...           +.+..
T Consensus        80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~-----------~~~~~  147 (261)
T PRK08265         80 RVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKF-----------AQTGR  147 (261)
T ss_pred             CCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhcc-----------CCCCC
Confidence            899999999975332222   22334455566654    44556665 4568999999976642           33457


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..|+.+|++.+.+++.++.|   .|+++++|+||++.|.+
T Consensus       148 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~  187 (261)
T PRK08265        148 WLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRV  187 (261)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChh
Confidence            78999999999999999987   58999999999988854

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.92  E-value=5.1e-24  Score=181.36  Aligned_cols=172  Identities=16%  Similarity=0.141  Sum_probs=131.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+|+||++++++|+++|++|+++.|+.  .+...+..+++...+.++.++.+|++|.++++++++.     +
T Consensus         7 ~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~--~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g   84 (261)
T PRK08936          7 GKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSD--EEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG   84 (261)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            39999999999999999999999999999987632  2222233333323345688899999999999888765     5


Q ss_pred             CCCEEEEccccCCcCCCccCh----HHHHHHhHHH----HHHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSN----TLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~----~~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||........+.+    +..++.|+.+    ++.+++.|.+.+ .++||++||...+           .+.+
T Consensus        85 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~-----------~~~~  153 (261)
T PRK08936         85 TLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ-----------IPWP  153 (261)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc-----------CCCC
Confidence            799999999986544433322    3345666554    355788887765 4799999996554           2556


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...|+.+|++.+.+++.++.+   .|+++++|+||.|.+..
T Consensus       154 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~  195 (261)
T PRK08936        154 LFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPI  195 (261)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCc
Confidence            6789999999999999999887   58999999999887754

>PRK05599 hypothetical protein; Provisional

Probab=99.92  E-value=3.6e-24  Score=180.97  Aligned_cols=170  Identities=13%  Similarity=0.134  Sum_probs=126.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCC-CceEEEEccCCCHHHHHHHhhc-----C
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEP-GRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      |+++||||++|||+++|++|+ +|++|++++|+..+   +.+..+++...+ ..+.++.+|++|.+++++++++     +
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~---~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   76 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEA---AQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAG   76 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHH---HHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcC
Confidence            579999999999999999999 59999999975433   333333332223 2478899999999999988765     6


Q ss_pred             CCCEEEEccccCCcCCCcc-Ch---HHHHHHhHHH----HHHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL-DP---LKYYHNITSN----TLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~-~~---~~~~~~~~~~----~~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|++|||||........+ ..   .+.+..|+.+    ++.++|.|.+++ .++||++||.+.+-           +.+
T Consensus        77 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~-----------~~~  145 (246)
T PRK05599         77 EISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWR-----------ARR  145 (246)
T ss_pred             CCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccccc-----------CCc
Confidence            8999999999854322111 11   1223344444    345678887664 58999999976652           344


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ....|++||++.+.+++.++.|   .|++++.+.||+|.|.+.
T Consensus       146 ~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~  188 (246)
T PRK05599        146 ANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMT  188 (246)
T ss_pred             CCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhh
Confidence            5779999999999999999998   589999999999988653

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4.2e-24  Score=181.35  Aligned_cols=173  Identities=18%  Similarity=0.159  Sum_probs=130.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCC-CcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRG-NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G-~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      .++|+||||+||||+++|++|+++| ++|++++|+... .+++.+.+++.  ...+++++.+|++|.++++++++.    
T Consensus         8 ~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~~~   85 (253)
T PRK07904          8 PQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAA--GASSVEVIDFDALDTDSHPKVIDAAFAG   85 (253)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhc--CCCceEEEEecCCChHHHHHHHHHHHhc
Confidence            4899999999999999999999995 999999975542 22233333222  123689999999999987766654    


Q ss_pred             CCCCEEEEccccCCcCC-CccChH---HHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGE-STLDPL---KYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~-~~~~~~---~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +++|++|||+|...... ...+.+   +.++.|+.+.    +.+++.|.+++.++||++||.+.+.           +.+
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~-----------~~~  154 (253)
T PRK07904         86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGER-----------VRR  154 (253)
T ss_pred             CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcC-----------CCC
Confidence            58999999999853321 112222   3467777764    4588899888889999999976542           234


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      +...|+.||++...++++++.|   +++++++++||+|.|.+.
T Consensus       155 ~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~  197 (253)
T PRK07904        155 SNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMS  197 (253)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchh
Confidence            4678999999999999999876   689999999998888544

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.92  E-value=4.8e-24  Score=183.84  Aligned_cols=155  Identities=25%  Similarity=0.327  Sum_probs=134.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEE
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH  151 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li~  151 (267)
                      +|+||||||+||++++++|+++|++|++++|.                        .+|+.+.++++++++..++|+|||
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~------------------------~~d~~~~~~~~~~~~~~~~d~vi~   56 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS------------------------QLDLTDPEALERLLRAIRPDAVVN   56 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc------------------------ccCCCCHHHHHHHHHhCCCCEEEE
Confidence            48999999999999999999999999998752                        479999999999998666899999


Q ss_pred             ccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 024488          152 FAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDII  231 (267)
Q Consensus       152 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~  231 (267)
                      +|+..........++..++.|..++.++++.+.+.+. ++|++||.++|+.....+++|+.+..+.+.|+.+|.++|.++
T Consensus        57 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~  135 (287)
T TIGR01214        57 TAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAI  135 (287)
T ss_pred             CCccccccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHH
Confidence            9997644334445677889999999999999988764 899999999998766678889888888899999999999999


Q ss_pred             HHhhhcCCCcEEEEeccccccccceeecCCC
Q 024488          232 LDFSKNSDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       232 ~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      +.+    +.+++++||+       ++|||+.
T Consensus       136 ~~~----~~~~~ilR~~-------~v~G~~~  155 (287)
T TIGR01214       136 RAA----GPNALIVRTS-------WLYGGGG  155 (287)
T ss_pred             HHh----CCCeEEEEee-------ecccCCC
Confidence            885    6799999999       8888874

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.9e-24  Score=181.03  Aligned_cols=170  Identities=17%  Similarity=0.166  Sum_probs=130.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+++||||+||||.+++++|+++|++|++++|+..+   ..+..+++...+.++.++++|++|.+++++++++     ++
T Consensus         9 k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (252)
T PRK07035          9 KIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDG---CQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR   85 (252)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999975433   2233333322345678899999999999888775     57


Q ss_pred             CCEEEEccccCC-cCCCc----cChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAY-VGEST----LDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       146 ~D~li~~Ag~~~-~~~~~----~~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      +|+||||||... ..+..    +..+..++.|+.+.    +.+++.|.+.+.++||++||...+.           +.++
T Consensus        86 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  154 (252)
T PRK07035         86 LDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS-----------PGDF  154 (252)
T ss_pred             CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcC-----------CCCC
Confidence            999999998642 12212    22334566776664    4466777777778999999976542           4456


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++++.++++++.|   .|++++.|+||.|.|.+
T Consensus       155 ~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~  195 (252)
T PRK07035        155 QGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKF  195 (252)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcc
Confidence            789999999999999999987   58999999999888754

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.4e-24  Score=181.87  Aligned_cols=168  Identities=13%  Similarity=0.056  Sum_probs=127.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+..+   ..+..+++...+.++.++.+|++|.++++++++.     +
T Consensus         5 ~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (258)
T PRK07890          5 GKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAER---LDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG   81 (258)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999975433   2232233322245688999999999999888765     6


Q ss_pred             CCCEEEEccccCCc-CCC----ccChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYV-GES----TLDPLKYYHNITSNTLVVLESMA----RHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~-~~~----~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||.... .+.    .+..+..++.|+.++..++..+.    +. .++||++||...+.           +.+
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~-----------~~~  149 (258)
T PRK07890         82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES-GGSIVMINSMVLRH-----------SQP  149 (258)
T ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCEEEEEechhhcc-----------CCC
Confidence            89999999997432 221    23334556677777655555543    33 36999999977652           455


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFT  252 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~  252 (267)
                      +...|+.+|.+.+.+++.++++   .++++++++||.|++
T Consensus       150 ~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~  189 (258)
T PRK07890        150 KYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWG  189 (258)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCc
Confidence            6789999999999999999987   589999999995555

>PRK08643 acetoin reductase; Validated

Probab=99.92  E-value=6.2e-24  Score=180.23  Aligned_cols=170  Identities=21%  Similarity=0.216  Sum_probs=128.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+++||||+||||++++++|+++|++|++++|+....++.   ..++...+.++.++++|++|++++++++++     ++
T Consensus         3 k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK08643          3 KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAA---ADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGD   79 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999999754332222   233322245788899999999999888875     57


Q ss_pred             CCEEEEccccCCcCCCcc----ChHHHHHHhHHHHH----HHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTL----DPLKYYHNITSNTL----VVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~----~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      +|+||||||.....+..+    ..+..++.|+.++.    .+++.|.+.+ .++||++||...+.           +.+.
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  148 (256)
T PRK08643         80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVV-----------GNPE  148 (256)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccccc-----------CCCC
Confidence            999999999754433322    22345566766644    4566665544 47999999976542           3345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.+|++.+.+++.++.|   .|++++.|+||+|.|..
T Consensus       149 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~  189 (256)
T PRK08643        149 LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPM  189 (256)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChh
Confidence            678999999999999999987   68999999999887754

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.92  E-value=7.1e-24  Score=181.95  Aligned_cols=168  Identities=15%  Similarity=0.073  Sum_probs=131.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+..   .+.+..+..   +..+.++++|++|.++++++++.     +
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~---~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTA---TLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHFG   76 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999996432   222222221   34678899999999999888765     5


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||........+    ..++.++.|+.++    +.+++.|++.+.++||++||.+.+.           +.+.
T Consensus        77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~~  145 (275)
T PRK08263         77 RLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGIS-----------AFPM  145 (275)
T ss_pred             CCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcC-----------CCCC
Confidence            8999999999865544333    3345566777774    4566667777778999999987763           3445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.+|++.+.+++.++.+   +|+++++++||++.+..
T Consensus       146 ~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~  186 (275)
T PRK08263        146 SGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDW  186 (275)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCc
Confidence            678999999999999999887   68999999999887744

>PRK05717 oxidoreductase; Validated

Probab=99.92  E-value=6.5e-24  Score=180.14  Aligned_cols=168  Identities=18%  Similarity=0.122  Sum_probs=127.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++++..   +..+..++.   +..+.++++|++|.+++++++++     +
T Consensus        10 ~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~---~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   83 (255)
T PRK05717         10 GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRE---RGSKVAKAL---GENAWFIAMDVADEAQVAAGVAEVLGQFG   83 (255)
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHH---HHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            399999999999999999999999999999986432   222222222   34678899999999998777655     5


Q ss_pred             CCCEEEEccccCCcC--C----CccChHHHHHHhHHHHHHHHHHHHH---cCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVG--E----STLDPLKYYHNITSNTLVVLESMAR---HGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~--~----~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||.....  +    ..++.++.++.|+.++..++..+.+   ...++||++||.+.+.           +.+
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~-----------~~~  152 (255)
T PRK05717         84 RLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQ-----------SEP  152 (255)
T ss_pred             CCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcC-----------CCC
Confidence            799999999976432  1    2223446677888887776666542   2347899999976652           334


Q ss_pred             CCChHHHHHHHHHHHHHHhhhcC--CCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKNS--DMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e~--g~~~~~vrp~~v~~~~  254 (267)
                      ....|+.+|++++.+++.++.++  ++++++++||+|.|..
T Consensus       153 ~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~  193 (255)
T PRK05717        153 DTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARD  193 (255)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCc
Confidence            46789999999999999999984  5899999999777643

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1e-23  Score=180.89  Aligned_cols=174  Identities=17%  Similarity=0.150  Sum_probs=129.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcc----hhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIG----AVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      |+++||||+||||++++++|+++|++|++++|+......    +.+..+++...+.++.++.+|+++.+++.++++.   
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   86 (273)
T PRK08278          7 KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVE   86 (273)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            899999999999999999999999999999986543221    1122222323345788999999999999988875   


Q ss_pred             --CCCCEEEEccccCCcCCCccCh----HHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                        +++|+||||||........+.+    +..++.|+.++..    +++.|.+++.++||++||......         ..
T Consensus        87 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~---------~~  157 (273)
T PRK08278         87 RFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDP---------KW  157 (273)
T ss_pred             HhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccc---------cc
Confidence              5899999999986544433333    3445567776444    556666666689999998654310         11


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecc-ccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLV-VFFTL  253 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~-~v~~~  253 (267)
                      .++...|+.||++++.+++.++.|   ++++++.|.|| ++.+.
T Consensus       158 ~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~  201 (273)
T PRK08278        158 FAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA  201 (273)
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH
Confidence            256789999999999999999998   48999999999 46553

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.92  E-value=6.5e-24  Score=179.96  Aligned_cols=169  Identities=22%  Similarity=0.145  Sum_probs=132.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+++||||+|+||++++++|+++|++|++++|+....+..   ..++...+.++.++.+|++|.++++++++.     ++
T Consensus         5 ~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          5 KVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAA---AEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH---HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999999754433322   223322345788999999999999888875     57


Q ss_pred             CCEEEEccccCCcCCCccCh----HHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|+||||||........+.+    +..++.|+.+    ++.+++.|.+.+.++||++||.+.+.           +.++.
T Consensus        82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~~~  150 (258)
T PRK12429         82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLV-----------GSAGK  150 (258)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhcc-----------CCCCc
Confidence            99999999976554333333    3345566666    66788888888889999999976653           34567


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      +.|+.+|++.+.+++.++++   .++++++++||.+.+.
T Consensus       151 ~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~  189 (258)
T PRK12429        151 AAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTP  189 (258)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcch
Confidence            89999999999999999887   5799999999977653

>PLN02253 xanthoxin dehydrogenase

Probab=99.92  E-value=7.6e-24  Score=182.12  Aligned_cols=170  Identities=16%  Similarity=0.106  Sum_probs=128.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|..+.   ..+..+++ ..+.++.++++|++|.++++++++.     +
T Consensus        18 ~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g   93 (280)
T PLN02253         18 GKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDL---GQNVCDSL-GGEPNVCFFHCDVTVEDDVSRAVDFTVDKFG   93 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHh-cCCCceEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            3899999999999999999999999999999864322   22222333 2234688999999999999988875     6


Q ss_pred             CCCEEEEccccCCcC--C----CccChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVG--E----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~--~----~~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      ++|+||||||.....  .    ..++.+..++.|+.++..    +++.|.+.+.++||++||.+..-           +.
T Consensus        94 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~-----------~~  162 (280)
T PLN02253         94 TLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAI-----------GG  162 (280)
T ss_pred             CCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcc-----------cC
Confidence            899999999975321  1    123345567778777555    45555555667999999866531           22


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +....|+.||++.+.+++.++.|   .++++++++||.|.|..
T Consensus       163 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~  205 (280)
T PLN02253        163 LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTAL  205 (280)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence            33568999999999999999988   48999999999887753

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.92  E-value=9.3e-24  Score=181.19  Aligned_cols=171  Identities=16%  Similarity=0.199  Sum_probs=129.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      ++|+++||||+|+||++++++|+++|++|++++|+..   ...+...++...+.++.++.+|++|.+++.++++.     
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVE---KCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEAL   85 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            3489999999999999999999999999999886432   22222222222244688899999999999988875     


Q ss_pred             CCCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHHH----HHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~~----l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +++|+||||||........+    ..++.++.|+.++.++    ++.+.+++.++||++||...+.           +.+
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~-----------~~~  154 (274)
T PRK07775         86 GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALR-----------QRP  154 (274)
T ss_pred             CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcC-----------CCC
Confidence            57999999999764433222    2334456777775554    5555566678999999987774           334


Q ss_pred             CCChHHHHHHHHHHHHHHhhhcC---CCcEEEEeccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKNS---DMAVMILRLVVFFTL  253 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e~---g~~~~~vrp~~v~~~  253 (267)
                      +...|+.+|++.+.+++.++++.   |++++++|||.+.+.
T Consensus       155 ~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~  195 (274)
T PRK07775        155 HMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTG  195 (274)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCc
Confidence            56789999999999999998874   899999999977554

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.92  E-value=7.2e-24  Score=180.28  Aligned_cols=169  Identities=17%  Similarity=0.145  Sum_probs=129.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc------
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (267)
                      ||++|||||+||||++++++|+++|++|++++|+..   ...+..++..  +.++.++.+|++|.+++.++++.      
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~---~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   75 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEA---GLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATG   75 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHH---HHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            589999999999999999999999999999996443   2222222221  34788999999999999887763      


Q ss_pred             CCCCEEEEccccCCcCCCc----cChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +++|+||||||........    ++.+..++.|+.++..    +.+.|.+.+.++||++||.+.+.           +..
T Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~  144 (260)
T PRK08267         76 GRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIY-----------GQP  144 (260)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCc-----------CCC
Confidence            5789999999986543322    2334556777776554    45566666778999999975542           233


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ....|+.||++.+.++++++.+   .++++++++||++.+..
T Consensus       145 ~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~  186 (260)
T PRK08267        145 GLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAM  186 (260)
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcc
Confidence            4678999999999999999876   58999999999887754

>PRK09242 tropinone reductase; Provisional

Probab=99.92  E-value=9e-24  Score=179.41  Aligned_cols=174  Identities=14%  Similarity=0.100  Sum_probs=131.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+....++..+.+.+.. .+.++.++++|+++.++++++++.     +
T Consensus         9 ~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   87 (257)
T PRK09242          9 GQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEF-PEREVHGLAADVSDDEDRRAILDWVEDHWD   87 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhC-CCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3999999999999999999999999999999975433222222222211 134788899999999999888775     6


Q ss_pred             CCCEEEEccccCCcCCC----ccChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGES----TLDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~----~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||.....+.    .++.+..+..|+.+.    +.++|.|.+++.++||++||.+.+.           +.++
T Consensus        88 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~-----------~~~~  156 (257)
T PRK09242         88 GLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLT-----------HVRS  156 (257)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCC-----------CCCC
Confidence            89999999997533322    223344556666664    4456777777778999999987763           4455


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ...|+.+|.+.+.++++++.+   .+++++.++||+|.|...
T Consensus       157 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~  198 (257)
T PRK09242        157 GAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLT  198 (257)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCccc
Confidence            778999999999999999887   589999999998877553

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.92  E-value=9.4e-24  Score=178.46  Aligned_cols=169  Identities=17%  Similarity=0.158  Sum_probs=130.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+|+||++++++|+++|++|++++|+..   ...+..+++. .+.++.++++|++|+++++++++.     +
T Consensus         5 ~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~---~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   80 (252)
T PRK06138          5 GRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAE---AAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARWG   80 (252)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHH---HHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999997543   2222223322 245688999999999999988875     5


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||........+    ..+..++.|+.++    ..+++.|.+.+.++||++||.....           +.+.
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~-----------~~~~  149 (252)
T PRK06138         81 RLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALA-----------GGRG  149 (252)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhcc-----------CCCC
Confidence            8999999999764433222    2333466777765    4566777777788999999976542           3345


Q ss_pred             CChHHHHHHHHHHHHHHhhhcC---CCcEEEEeccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKNS---DMAVMILRLVVFFTL  253 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e~---g~~~~~vrp~~v~~~  253 (267)
                      ...|+.+|++.+.+++.++.+.   ++++++++||.+.+.
T Consensus       150 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~  189 (252)
T PRK06138        150 RAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTP  189 (252)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCc
Confidence            6789999999999999999874   899999999966654

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.92  E-value=7.5e-24  Score=180.20  Aligned_cols=169  Identities=21%  Similarity=0.188  Sum_probs=126.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+++||||++|||++++++|+++|++|++++|+..   .+.+..+++.. .+++.++++|++|.+++++++++     ++
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~l~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~   76 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEE---NLEKALKELKE-YGEVYAVKADLSDKDDLKNLVKEAWELLGG   76 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHHHh-cCCceEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            47999999999999999999999999999996543   33333333322 23678899999999999988865     68


Q ss_pred             CCEEEEccccCCc--CCCcc-ChHHH---HHHhHHH----HHHHHHHHHH-cCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYV--GESTL-DPLKY---YHNITSN----TLVVLESMAR-HGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       146 ~D~li~~Ag~~~~--~~~~~-~~~~~---~~~~~~~----~~~~l~~~~~-~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      +|+||||||....  ....+ ..+++   +..|+.+    +..+++.|.+ .+.++||++||.+.+.           +.
T Consensus        77 id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~-----------~~  145 (259)
T PRK08340         77 IDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKE-----------PM  145 (259)
T ss_pred             CCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCC-----------CC
Confidence            9999999997432  12222 22222   2334333    4556777763 4568999999987752           45


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ++...|+.+|++.+.++++++.+   .|++++.|.||+|.|..
T Consensus       146 ~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~  188 (259)
T PRK08340        146 PPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPG  188 (259)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCcc
Confidence            56789999999999999999998   57999999999888753

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=8.1e-24  Score=180.48  Aligned_cols=168  Identities=15%  Similarity=0.098  Sum_probs=122.6

Q ss_pred             CcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +|+++||||++  |||+++|++|+++|++|++++|+.    ...+.++++....+.+.++.+|++|.++++++++.    
T Consensus         6 ~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (262)
T PRK07984          6 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND----KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKV   81 (262)
T ss_pred             CCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch----hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhh
Confidence            38999999985  999999999999999999988642    12222333322233567889999999999998875    


Q ss_pred             -CCCCEEEEccccCCcCC-----CccChH----HHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYVGE-----STLDPL----KYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPIT  209 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~~-----~~~~~~----~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~  209 (267)
                       +++|+||||||+.....     ..+...    ..++.|+.+    ++.+++.+. . .++||++||.+..         
T Consensus        82 ~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~-~g~Iv~iss~~~~---------  150 (262)
T PRK07984         82 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN-P-GSALLTLSYLGAE---------  150 (262)
T ss_pred             cCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc-C-CcEEEEEecCCCC---------
Confidence             67999999999753211     111222    233445554    334455443 3 3799999997654         


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          210 EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       210 e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                        .+.+.+..|++||++++++++.++.|   .|+++++|.||+|.|..
T Consensus       151 --~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~  196 (262)
T PRK07984        151 --RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLA  196 (262)
T ss_pred             --CCCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchH
Confidence              24455779999999999999999997   58999999999998854

>PRK09186 flagellin modification protein A; Provisional

Probab=99.92  E-value=1.1e-23  Score=178.62  Aligned_cols=181  Identities=17%  Similarity=0.137  Sum_probs=127.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||+++|++|+++|++|++++|+....+...+.+.+.. ....+.++.+|++|++++.++++.     +
T Consensus         4 ~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          4 GKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEF-KSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhc-CCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999875433322222222111 123466779999999999988875     5


Q ss_pred             CCCEEEEccccCCc---CCCccC----hHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYV---GESTLD----PLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       145 ~~D~li~~Ag~~~~---~~~~~~----~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                      ++|+|||||+....   ....+.    ....++.|..+    ++.+++.|.+++.++||++||.+.+..... ...+..+
T Consensus        83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-~~~~~~~  161 (256)
T PRK09186         83 KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF-EIYEGTS  161 (256)
T ss_pred             CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc-hhccccc
Confidence            69999999975321   121222    22334445444    566788888877789999999776532211 1222233


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFT  252 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~  252 (267)
                      ......|+.||++.+.+++.++.+   .++++++++||.+.+
T Consensus       162 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~  203 (256)
T PRK09186        162 MTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILD  203 (256)
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccC
Confidence            333457999999999999999987   589999999995544

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.92  E-value=1.2e-23  Score=177.31  Aligned_cols=172  Identities=19%  Similarity=0.151  Sum_probs=130.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++..+  ++.....+.++++...+.++..+.+|++|.+++++++++     +
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCG--PNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcC--CChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            389999999999999999999999999988653  222233333344333345678889999999999888765     5


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||.....+..    ++.++.++.|+.+    ++.+++.|.+.+.++||++||.....           +.+.
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~  149 (246)
T PRK12938         81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK-----------GQFG  149 (246)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccC-----------CCCC
Confidence            899999999975433222    2334455666666    45577777777778999999976541           3445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.+|++.+.++++++++   .++++++|+||++.|..
T Consensus       150 ~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~  190 (246)
T PRK12938        150 QTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDM  190 (246)
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCch
Confidence            789999999999999999887   68999999999888754

>PRK12743 oxidoreductase; Provisional

Probab=99.92  E-value=1e-23  Score=179.06  Aligned_cols=172  Identities=16%  Similarity=0.151  Sum_probs=129.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|+++.+.  +.+...+..+++...+.++.++.+|++|++++++++++     +
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHS--DEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLG   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC--ChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4899999999999999999999999999998753  22333333333333356789999999999999888875     6


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHHHHHH----HHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVV----LESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~~----l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||........    +..++.+..|+.+...+    ++.|.+++ .++||++||....           .+.+
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~-----------~~~~  148 (256)
T PRK12743         80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH-----------TPLP  148 (256)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc-----------CCCC
Confidence            799999999976433222    23344566677765554    45554443 4799999996543           3556


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...|+.+|++.+.++++++.+   .+++++.|+||.+.|..
T Consensus       149 ~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~  190 (256)
T PRK12743        149 GASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPM  190 (256)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcc
Confidence            6789999999999999999987   57999999999777654

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=1.1e-23  Score=179.03  Aligned_cols=173  Identities=13%  Similarity=0.073  Sum_probs=130.9

Q ss_pred             CcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEEecCCCC--------CcchhhhhhhcCCCCCceEEEEccCCCHHHHHH
Q 024488           70 VTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRG--------NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK  139 (267)
Q Consensus        70 ~k~vlVTGasg--gIG~~la~~L~~~G~~V~~~~r~~~~--------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~  139 (267)
                      +|+++||||++  |||+++|++|+++|++|+++++...+        .++..+..+++...+.++.++++|++|.+++++
T Consensus         6 ~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~   85 (256)
T PRK12859          6 NKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKE   85 (256)
T ss_pred             CcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence            39999999994  99999999999999999998643211        111122223333335678899999999999998


Q ss_pred             Hhhc-----CCCCEEEEccccCCcCCCcc----ChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCC
Q 024488          140 FFSE-----NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKM  206 (267)
Q Consensus       140 ~~~~-----~~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~  206 (267)
                      +++.     +++|+||||||.....+..+    ..+..++.|+.+    ++.+++.|.+.+.++||++||.+...     
T Consensus        86 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----  160 (256)
T PRK12859         86 LLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG-----  160 (256)
T ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC-----
Confidence            8875     57999999999754433222    233345666666    34567888777778999999977652     


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          207 PITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       207 ~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                            +.++...|+.+|++++.++++++.+   ++++++.|+||++.|.
T Consensus       161 ------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~  204 (256)
T PRK12859        161 ------PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTG  204 (256)
T ss_pred             ------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCC
Confidence                  4556889999999999999999987   6899999999988774

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=7.4e-24  Score=178.88  Aligned_cols=169  Identities=18%  Similarity=0.225  Sum_probs=131.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      ++++||||+|+||++++++|+++|++|++++|+....+   +...++.. +.++.++.+|++|+++++++++.     ++
T Consensus         6 ~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK07231          6 KVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAE---RVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERFGS   81 (251)
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            89999999999999999999999999999997653322   22222222 34688999999999999988765     57


Q ss_pred             CCEEEEccccCCcCC-----CccChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGE-----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~-----~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      +|+||||||......     ..+..++.++.|+.+    ++.+++.|.+.+.++||++||...+.           +.++
T Consensus        82 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  150 (251)
T PRK07231         82 VDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLR-----------PRPG  150 (251)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcC-----------CCCC
Confidence            999999999743221     223334556677766    45566667667788999999987774           4556


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.+|++.+.+++.++.+   .+++++.++||.+.+..
T Consensus       151 ~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~  191 (251)
T PRK07231        151 LGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGL  191 (251)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCc
Confidence            789999999999999999887   48999999999887754

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.6e-23  Score=178.46  Aligned_cols=173  Identities=18%  Similarity=0.152  Sum_probs=128.7

Q ss_pred             CcEEEEEcCCC-hhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           70 VTHVLVTGGAG-YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        70 ~k~vlVTGasg-gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      +|+++||||+| |||+++++.|+++|++|++++|+....++..+.+++.. ...++.++++|+++.++++++++.     
T Consensus        17 ~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   95 (262)
T PRK07831         17 GKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAEL-GLGRVEAVVCDVTSEAQVDALIDAAVERL   95 (262)
T ss_pred             CCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            48999999996 89999999999999999999865433333322222211 123678899999999999988875     


Q ss_pred             CCCCEEEEccccCCcCCCccChHH----HHHHhHHHH----HHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTLDPLK----YYHNITSNT----LVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~----~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      +++|+||||||........+.+.+    .++.|+.+.    +.+++.|.+.+ .++||++||...+-           +.
T Consensus        96 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~-----------~~  164 (262)
T PRK07831         96 GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR-----------AQ  164 (262)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC-----------CC
Confidence            689999999997544433333333    344455553    44667776665 68999999966542           34


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ++...|+.+|++.+.+++.++.|   +|+++++|+||.+.+..
T Consensus       165 ~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~  207 (262)
T PRK07831        165 HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPF  207 (262)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcc
Confidence            55778999999999999999987   68999999999887754

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.2e-23  Score=178.68  Aligned_cols=171  Identities=18%  Similarity=0.176  Sum_probs=128.1

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +.+ |++|||||+||||++++++|+++|++|++++|+..+.    +..+++...+.++.++.+|+++.+++++++++   
T Consensus         5 l~~-~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (258)
T PRK08628          5 LKD-KVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD----EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVA   79 (258)
T ss_pred             cCC-CEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH----HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            344 8999999999999999999999999999998754332    22333323345788999999999999888875   


Q ss_pred             --CCCCEEEEccccCCcCCCcc---ChHHHHHHhHHHHHHH----HHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYVGESTL---DPLKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~~~~~~---~~~~~~~~~~~~~~~~----l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                        +++|+||||||.......+.   +.+..++.|+.+...+    ++.+.+ +.++||++||...+.           +.
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~iv~~ss~~~~~-----------~~  147 (258)
T PRK08628         80 KFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKA-SRGAIVNISSKTALT-----------GQ  147 (258)
T ss_pred             hcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhc-cCcEEEEECCHHhcc-----------CC
Confidence              57999999999754332222   2334455666654444    444443 347999999976652           34


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ++...|+.||++++.+++.++.|   .+++++.|+||.|.+.+
T Consensus       148 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~  190 (258)
T PRK08628        148 GGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPL  190 (258)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHH
Confidence            45789999999999999999876   58999999999776643

>PRK05855 short chain dehydrogenase; Validated

Probab=99.92  E-value=7.7e-24  Score=199.17  Aligned_cols=171  Identities=16%  Similarity=0.137  Sum_probs=134.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      .+++|||||+||||++++++|+++|++|++++|+....++.   .+++...+.++.++.+|++|.+++++++++     +
T Consensus       315 ~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  391 (582)
T PRK05855        315 GKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERT---AELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHG  391 (582)
T ss_pred             CCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            38999999999999999999999999999999754333222   233322345788999999999999988875     5


Q ss_pred             CCCEEEEccccCCcCCCccCh----HHHHHHhHHHH----HHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNT----LVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~----~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||+.......+.+    +..++.|+.+.    +.+++.|.+++ .++||++||.+++.           +.+
T Consensus       392 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~  460 (582)
T PRK05855        392 VPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYA-----------PSR  460 (582)
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc-----------CCC
Confidence            799999999986554433333    33455676664    44677777765 47999999998884           445


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...|++||++++.+++.++.|   .|+++++|+||.|.|.+
T Consensus       461 ~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  502 (582)
T PRK05855        461 SLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNI  502 (582)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccc
Confidence            6789999999999999999987   58999999999998854

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.8e-23  Score=177.75  Aligned_cols=170  Identities=15%  Similarity=0.108  Sum_probs=126.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|+++++..  .+...+..+++...+.++.++.+|++|.+++.+++++     +
T Consensus         9 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   86 (258)
T PRK09134          9 PRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRS--RDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG   86 (258)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            48999999999999999999999999999887532  2222222233222345688899999999999988865     5


Q ss_pred             CCCEEEEccccCCcCC----CccChHHHHHHhHHHHHHHHHH----HHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~----~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||......    ..+..++.++.|+.++..++..    +.+...++||+++|...+.           +.+.
T Consensus        87 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~-----------~~p~  155 (258)
T PRK09134         87 PITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWN-----------LNPD  155 (258)
T ss_pred             CCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcC-----------CCCC
Confidence            7999999999754332    2233455677787776655544    4444567999998866652           3344


Q ss_pred             CChHHHHHHHHHHHHHHhhhcC--CCcEEEEecccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKNS--DMAVMILRLVVFFT  252 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e~--g~~~~~vrp~~v~~  252 (267)
                      ...|+.||++++.+++.+++++  ++++++++||.+.+
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t  193 (258)
T PRK09134        156 FLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLP  193 (258)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccC
Confidence            5689999999999999999873  48999999997765

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.7e-23  Score=179.80  Aligned_cols=172  Identities=17%  Similarity=0.165  Sum_probs=129.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+...  ...+..+.+...+.++.++.+|++|.+++++++++     +
T Consensus        46 ~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~  123 (290)
T PRK06701         46 GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHE--DANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG  123 (290)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcch--HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4899999999999999999999999999999875322  12222222222345788999999999999888875     5


Q ss_pred             CCCEEEEccccCCcC-CCc----cChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVG-EST----LDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~-~~~----~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      ++|+||||||..... ...    +.....++.|+.+...++..+.+.  ..++||++||.+.+.           +.+..
T Consensus       124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~-----------~~~~~  192 (290)
T PRK06701        124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYE-----------GNETL  192 (290)
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccC-----------CCCCc
Confidence            799999999975332 221    233445677777766666555432  246999999988874           33345


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..|+.+|++++.++++++.+   .|++++.|+||.|.|..
T Consensus       193 ~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~  232 (290)
T PRK06701        193 IDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPL  232 (290)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcc
Confidence            78999999999999999998   48999999999887753

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.5e-23  Score=177.64  Aligned_cols=171  Identities=20%  Similarity=0.194  Sum_probs=128.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-------
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-------  143 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-------  143 (267)
                      ++++||||+||||++++++|+++|++|+++..  ++.+...+..+++...+.+++++++|++|.+++.+++++       
T Consensus         7 ~~ilItGasg~iG~~la~~l~~~G~~v~i~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   84 (254)
T PRK12746          7 KVALVTGASRGIGRAIAMRLANDGALVAIHYG--RNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI   84 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC--CCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence            89999999999999999999999999987532  222333333333323345688999999999999888774       


Q ss_pred             ----CCCCEEEEccccCCcCCCccCh----HHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          144 ----NAFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       144 ----~~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                          +++|++|||||........+.+    +..++.|+.++.+++..+.+.  ..+++|++||..++.           +
T Consensus        85 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~-----------~  153 (254)
T PRK12746         85 RVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRL-----------G  153 (254)
T ss_pred             ccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcC-----------C
Confidence                3699999999976544433333    334457777776666665542  346999999988763           4


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .++...|+.||++.+.++++++++   .++++++++||++.+.+
T Consensus       154 ~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~  197 (254)
T PRK12746        154 FTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDI  197 (254)
T ss_pred             CCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcc
Confidence            456788999999999999999886   68999999999776644

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.6e-23  Score=177.71  Aligned_cols=169  Identities=18%  Similarity=0.159  Sum_probs=128.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|++|||||+||||++++++|+++|++|++++|+..+.+...+   .....+.++.++.+|++|.+++.++++ .++|+|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~id~v   77 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRA---EAARRGLALRVEKLDLTDAIDRAQAAE-WDVDVL   77 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HHHhcCCcceEEEeeCCCHHHHHHHhc-CCCCEE
Confidence            3789999999999999999999999999999975432222222   111223468889999999999988875 379999


Q ss_pred             EEccccCCcCCCccChH----HHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHH
Q 024488          150 MHFAAVAYVGESTLDPL----KYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYG  221 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~----~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~  221 (267)
                      |||||.....+..+.+.    ..++.|+.+    ++.+++.+.+.+.++||++||.+.+.           +.+....|+
T Consensus        78 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~-----------~~~~~~~Y~  146 (257)
T PRK09291         78 LNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLI-----------TGPFTGAYC  146 (257)
T ss_pred             EECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhcc-----------CCCCcchhH
Confidence            99999865444333333    344555555    44567777777778999999976542           234467899


Q ss_pred             HHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          222 KAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       222 ~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      .||++++.+++.++.+   .|+++++||||++.+.
T Consensus       147 ~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~  181 (257)
T PRK09291        147 ASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTG  181 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccc
Confidence            9999999999998876   6999999999988764

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.92  E-value=1.6e-23  Score=178.03  Aligned_cols=168  Identities=17%  Similarity=0.097  Sum_probs=125.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |++|||||+|+||++++++|+++|++|++++|+....+...+.+.+.. ...++.++.+|++|.+++.+++++     ++
T Consensus         3 k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          3 QVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEY-GEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhc-CCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            789999999999999999999999999999975433322222222211 113688999999999999888875     68


Q ss_pred             CCEEEEccccCCcCCCccCh----HHHHHHhHHHH----HHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTLDP----LKYYHNITSNT----LVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~----~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      +|++|||||........+.+    +..++.|+.++    +.+++.|.+.+ .++||++||.+...           +.+.
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~-----------~~~~  150 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKV-----------GSKH  150 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCccccc-----------CCCC
Confidence            99999999976554433333    33446666664    45666666666 57999999955321           2334


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVF  250 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v  250 (267)
                      ...|+.||++.+.++++++.|   +|+++++++||.+
T Consensus       151 ~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~  187 (259)
T PRK12384        151 NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNL  187 (259)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCc
Confidence            678999999999999999875   7999999999944

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.92  E-value=1.9e-23  Score=175.15  Aligned_cols=163  Identities=18%  Similarity=0.229  Sum_probs=123.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |++|||||+||||++++++|+++|++|++++|+..   ...+.+++.     .+.++.+|++|.++++++++.     ++
T Consensus         3 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~   74 (236)
T PRK06483          3 APILITGAGQRIGLALAWHLLAQGQPVIVSYRTHY---PAIDGLRQA-----GAQCIQADFSTNAGIMAFIDELKQHTDG   74 (236)
T ss_pred             ceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHHc-----CCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence            79999999999999999999999999999997542   222222221     367899999999999888876     56


Q ss_pred             CCEEEEccccCCcCCCcc----ChHHHHHHhHHH----HHHHHHHHHHcC--CCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTL----DPLKYYHNITSN----TLVVLESMARHG--VDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~----~~~~l~~~~~~~--~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +|++|||||........+    ..+..++.|+.+    ++.+++.|.+.+  .++||++||.....           +.+
T Consensus        75 id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~-----------~~~  143 (236)
T PRK06483         75 LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK-----------GSD  143 (236)
T ss_pred             ccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc-----------CCC
Confidence            999999999753332222    223344555555    345677777665  57999999966541           344


Q ss_pred             CCChHHHHHHHHHHHHHHhhhcC--CCcEEEEecccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKNS--DMAVMILRLVVFFT  252 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e~--g~~~~~vrp~~v~~  252 (267)
                      ....|+.||++.+.+++.++.|+  ++++++|+||++.+
T Consensus       144 ~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~  182 (236)
T PRK06483        144 KHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILF  182 (236)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceec
Confidence            57789999999999999999983  59999999997754

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=1.2e-23  Score=179.14  Aligned_cols=168  Identities=18%  Similarity=0.108  Sum_probs=121.5

Q ss_pred             CcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +|+++||||++  |||+++|++|+++|++|++.+|+..    ..+.++++....+...++++|++|+++++++++.    
T Consensus         8 ~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~----~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (260)
T PRK06603          8 GKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEV----LEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEK   83 (260)
T ss_pred             CcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchH----HHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHH
Confidence            38999999997  9999999999999999999886421    1222222211111234678999999999998875    


Q ss_pred             -CCCCEEEEccccCCc----CCCccChHH----HHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYV----GESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~----~~~~~~~~~----~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                       +++|+||||||....    .+..+.+.+    .++.|+.+    ++.++|.|.+  .++||++||.+...         
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~---------  152 (260)
T PRK06603         84 WGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEK---------  152 (260)
T ss_pred             cCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCcccc---------
Confidence             689999999997532    122222222    34445444    3345566643  37999999966541         


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                        +.+....|+.||++++.|+++++.|   +|+++++|.||+|.|..
T Consensus       153 --~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~  197 (260)
T PRK06603        153 --VIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLA  197 (260)
T ss_pred             --CCCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchh
Confidence              3445678999999999999999998   68999999999988854

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.9e-23  Score=177.60  Aligned_cols=170  Identities=15%  Similarity=0.066  Sum_probs=130.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCC-CCCceEEEEccCCCHHHHHHHhhc-CCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSE-NAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D  147 (267)
                      +|+++||||+||||++++++|+++|++|++++|+...   ..+..+++.. .+.++.++.+|++|+++++++++. +++|
T Consensus         7 ~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id   83 (259)
T PRK06125          7 GKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADA---LEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDID   83 (259)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence            3999999999999999999999999999999975432   2222222221 134688899999999999998876 6899


Q ss_pred             EEEEccccCCcCCCccChH----HHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCCh
Q 024488          148 AVMHFAAVAYVGESTLDPL----KYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~----~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~  219 (267)
                      ++|||||........+...    ..++.|+.+    ++.+++.|.+.+.++||++||....           .+...+..
T Consensus        84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-----------~~~~~~~~  152 (259)
T PRK06125         84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGE-----------NPDADYIC  152 (259)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCcccc-----------CCCCCchH
Confidence            9999999764433333333    334556555    4557777877766899999996553           24455778


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          220 YGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       220 Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      |+++|++++.++++++.|   .|++++.|+||.+.|.
T Consensus       153 y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~  189 (259)
T PRK06125        153 GSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATD  189 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccH
Confidence            999999999999999876   5899999999988875

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.92  E-value=2.5e-23  Score=176.51  Aligned_cols=171  Identities=13%  Similarity=0.127  Sum_probs=129.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+|+||||++|||++++++|+++|++|++++|.....+...+.++   ..+.++.++.+|++|.+++.++++.     +
T Consensus        11 ~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~---~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   87 (255)
T PRK06113         11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQ---QLGGQAFACRCDITSEQELSALADFALSKLG   87 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHH---hcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4999999999999999999999999999999864433222222222   2244688899999999999887765     6


Q ss_pred             CCCEEEEccccCCcCCCc---cChHHHHHHhHHHHHHH----HHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST---LDPLKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~---~~~~~~~~~~~~~~~~~----l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      ++|+||||||...+...+   +..+..++.|+.+...+    ++.|.+.+.++||++||.+...           +.++.
T Consensus        88 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~  156 (255)
T PRK06113         88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN-----------KNINM  156 (255)
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC-----------CCCCc
Confidence            799999999975443322   23334467777775554    4455556667999999976642           44557


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..|+.+|++.+.+++.++.+   .+++++++.||.+.|..
T Consensus       157 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~  196 (255)
T PRK06113        157 TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDA  196 (255)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccc
Confidence            78999999999999999987   57999999999887743

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.92  E-value=2e-24  Score=182.91  Aligned_cols=167  Identities=27%  Similarity=0.353  Sum_probs=126.1

Q ss_pred             EEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCCcchhhhhhhcCCCCCce----EEEEccCCCHHHHHHHhhcCCCC
Q 024488           73 VLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRL----QFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      ||||||+|.||++++++|++.+ .+++++++++.+.....+.+.+... ..++    ..+.+|++|.+.+.+++++.++|
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~-~~~v~~~~~~vigDvrd~~~l~~~~~~~~pd   79 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFP-DPKVRFEIVPVIGDVRDKERLNRIFEEYKPD   79 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC---TTCEEEEE--CTSCCHHHHHHHHTT--T-S
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhccc-ccCcccccCceeecccCHHHHHHHHhhcCCC
Confidence            7999999999999999999998 5899999765544444444432222 2234    34578999999999999988999


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (267)
                      +|||.|+.-+.+..+.+|.+.+++|+.||+++++++.+.+.+++|++||-              ....|.+.||+||..+
T Consensus        80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTD--------------KAv~PtnvmGatKrla  145 (293)
T PF02719_consen   80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTD--------------KAVNPTNVMGATKRLA  145 (293)
T ss_dssp             EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEEC--------------GCSS--SHHHHHHHHH
T ss_pred             EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccc--------------ccCCCCcHHHHHHHHH
Confidence            99999999888888899999999999999999999999999999999993              3456789999999999


Q ss_pred             HHHHHHhhhcC---CCcEEEEeccccccccceeecCC
Q 024488          228 EDIILDFSKNS---DMAVMILRLVVFFTLVAFVIKIN  261 (267)
Q Consensus       228 e~l~~~~a~e~---g~~~~~vrp~~v~~~~~~~~Gp~  261 (267)
                      |.++.+++...   +.++++||+|       ||.|..
T Consensus       146 E~l~~~~~~~~~~~~t~f~~VRFG-------NVlgS~  175 (293)
T PF02719_consen  146 EKLVQAANQYSGNSDTKFSSVRFG-------NVLGSR  175 (293)
T ss_dssp             HHHHHHHCCTSSSS--EEEEEEE--------EETTGT
T ss_pred             HHHHHHHhhhCCCCCcEEEEEEec-------ceecCC
Confidence            99999998875   6889999999       888754

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.92  E-value=2e-23  Score=176.16  Aligned_cols=171  Identities=18%  Similarity=0.122  Sum_probs=130.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|+++.+.  +.+...+..+++...+.++.++++|++|.+++.++++.     +
T Consensus         6 ~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK12935          6 GKVAIVTGGAKGIGKAITVALAQEGAKVVINYNS--SKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG   83 (247)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCC--cHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999876542  22233333333333345789999999999999988876     6


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHHHHHH----HHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~~----l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||........    +..++.++.|+.++..+    ++.+.+.+.++||++||.+.+.           +.++
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  152 (247)
T PRK12935         84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQA-----------GGFG  152 (247)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcC-----------CCCC
Confidence            799999999986543322    34455667777775554    4555556668999999976542           2345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      ...|+.+|++.+.+++.++.+   .++++++++||.|.+.
T Consensus       153 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~  192 (247)
T PRK12935        153 QTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTE  192 (247)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcCh
Confidence            789999999999999999887   4899999999977654

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.92  E-value=1.7e-23  Score=182.98  Aligned_cols=181  Identities=15%  Similarity=0.116  Sum_probs=130.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      |+++||||++|||++++++|+++| ++|++++|+..   +..+..+++...+..+.++.+|++|.++++++++.     +
T Consensus         4 k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   80 (314)
T TIGR01289         4 PTVIITGASSGLGLYAAKALAATGEWHVIMACRDFL---KAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGR   80 (314)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHH---HHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999 99999986543   33333333322244678899999999999988865     5


Q ss_pred             CCCEEEEccccCCcC-C----CccChHHHHHHhHHH----HHHHHHHHHHcC--CCEEEEEeccccccCCCC--------
Q 024488          145 AFDAVMHFAAVAYVG-E----STLDPLKYYHNITSN----TLVVLESMARHG--VDTLIYSSTCATYGEPEK--------  205 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~-~----~~~~~~~~~~~~~~~----~~~~l~~~~~~~--~~~iV~vSS~~~~g~~~~--------  205 (267)
                      ++|+||||||+..+. .    ..+..+..++.|+.+    ++.++|.|.+.+  .++||++||.+.+.....        
T Consensus        81 ~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  160 (314)
T TIGR01289        81 PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKAN  160 (314)
T ss_pred             CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccc
Confidence            799999999975321 1    112334456677666    455788887764  479999999877532100        


Q ss_pred             -C-------------CCCCCCCCCCCChHHHHHHHHHHHHHHhhhc----CCCcEEEEeccccc-ccc
Q 024488          206 -M-------------PITEETPQAPINPYGKAKKMAEDIILDFSKN----SDMAVMILRLVVFF-TLV  254 (267)
Q Consensus       206 -~-------------~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e----~g~~~~~vrp~~v~-~~~  254 (267)
                       .             +..+..+..+...|+.||++...+++.++++    .|++++.++||+|. |.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l  228 (314)
T TIGR01289       161 LGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGL  228 (314)
T ss_pred             ccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcc
Confidence             0             0011233456678999999999999999875    37999999999884 644

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.8e-23  Score=179.77  Aligned_cols=171  Identities=17%  Similarity=0.165  Sum_probs=128.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+++||||+||||++++++|+++|++|++++|+....+...+...+. ..+.+++++.+|++|++++++ +++     ++
T Consensus         4 k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~   81 (280)
T PRK06914          4 KIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQL-NLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGR   81 (280)
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhc-CCCCceeEEecCCCCHHHHHH-HHHHHHhcCC
Confidence            78999999999999999999999999999997543333332222221 113468899999999999887 543     67


Q ss_pred             CCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|+||||||........+    ..++.++.|+.++..    +++.|++.+.++||++||.+.+.           +.++.
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~~~  150 (280)
T PRK06914         82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRV-----------GFPGL  150 (280)
T ss_pred             eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccC-----------CCCCC
Confidence            999999999865443332    333455677777444    55557777778999999965542           34457


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..|+.+|++.+.++++++.+   +|+++++++||.+.+.+
T Consensus       151 ~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~  190 (280)
T PRK06914        151 SPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNI  190 (280)
T ss_pred             chhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccch
Confidence            89999999999999999855   69999999999887753

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.5e-23  Score=177.03  Aligned_cols=168  Identities=21%  Similarity=0.201  Sum_probs=127.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|.....+...+   ++...+.++.++.+|++|.++++++++.     +
T Consensus         6 ~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~---~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (250)
T PRK07774          6 DKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAK---QIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG   82 (250)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            3899999999999999999999999999999975432222222   2222234677899999999999887765     5


Q ss_pred             CCCEEEEccccCCc---CC----CccChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYV---GE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       145 ~~D~li~~Ag~~~~---~~----~~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                      ++|+||||||+...   ..    ..+..++.++.|+.++.+    +++.+.+.+.++||++||.+.+.            
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------  150 (250)
T PRK07774         83 GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL------------  150 (250)
T ss_pred             CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC------------
Confidence            79999999997532   11    222334456677777555    55556566678999999987763            


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                        +.+.|+.||++.+.++++++++   .++++++++||.+.+..
T Consensus       151 --~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~  192 (250)
T PRK07774        151 --YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEA  192 (250)
T ss_pred             --CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcc
Confidence              2568999999999999999987   47999999999766543

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=8.4e-24  Score=180.19  Aligned_cols=168  Identities=14%  Similarity=0.054  Sum_probs=123.6

Q ss_pred             CcEEEEEcC--CChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGa--sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      .|+++||||  ++|||+++|++|+++|++|++++|..+..+.+.+..++.    +....+++|++|+++++++++.    
T Consensus         6 ~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~   81 (260)
T PRK06997          6 GKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF----GSDLVFPCDVASDEQIDALFASLGQH   81 (260)
T ss_pred             CcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhc----CCcceeeccCCCHHHHHHHHHHHHHH
Confidence            389999996  689999999999999999999876433333332222222    1234689999999999998876    


Q ss_pred             -CCCCEEEEccccCCcC----C-CccCh----HHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYVG----E-STLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPIT  209 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~----~-~~~~~----~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~  209 (267)
                       +++|+||||||.....    + .++.+    +..++.|+.+    ++.++|.|.  +.++||++||.+..         
T Consensus        82 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~--~~g~Ii~iss~~~~---------  150 (260)
T PRK06997         82 WDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS--DDASLLTLSYLGAE---------  150 (260)
T ss_pred             hCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC--CCceEEEEeccccc---------
Confidence             7899999999985321    1 11122    2334555555    455677773  24789999997653         


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          210 EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       210 e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                        .+.+....|++||++++.++++++.|   +|++++.|.||+|.|..
T Consensus       151 --~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~  196 (260)
T PRK06997        151 --RVVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLA  196 (260)
T ss_pred             --cCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccch
Confidence              23455778999999999999999987   58999999999998854

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=1.7e-23  Score=177.02  Aligned_cols=167  Identities=21%  Similarity=0.246  Sum_probs=124.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+++||||+||||+++++.|+++|++|+++.++  ..+...+...+.   +.++.++++|++|+++++++++.     ++
T Consensus         6 k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~--~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (253)
T PRK08642          6 QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQ--SEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEHFGK   80 (253)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCC--CHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999987642  222222222222   24688899999999999988875     34


Q ss_pred             -CCEEEEccccCCc------CCC----ccChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCC
Q 024488          146 -FDAVMHFAAVAYV------GES----TLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       146 -~D~li~~Ag~~~~------~~~----~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                       +|++|||||....      ...    .+..++.++.|+.++..    +++.|.+.+.++||++||....          
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~----------  150 (253)
T PRK08642         81 PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQ----------  150 (253)
T ss_pred             CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcccc----------
Confidence             9999999986321      111    12233456677776544    4555556667899999996543          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                       .+..+...|+.||++.+.+++.++++   .|++++.|+||++.+.
T Consensus       151 -~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~  195 (253)
T PRK08642        151 -NPVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTT  195 (253)
T ss_pred             -CCCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCc
Confidence             24456779999999999999999987   5799999999988774

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.92  E-value=2.8e-23  Score=176.18  Aligned_cols=171  Identities=16%  Similarity=0.114  Sum_probs=131.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+|+||++++++|+++|++|++++|+..   .+.+..+++...+.++.++.+|++|++++.+++++     +
T Consensus        11 ~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   87 (256)
T PRK06124         11 GQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAA---TLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHG   87 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHH---HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            499999999999999999999999999999997542   22232333323345688999999999999888875     5


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||.....+..+    ..++.++.|+.++..    +++.|.+.+.++||++||...+.           +.+.
T Consensus        88 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~~~~  156 (256)
T PRK06124         88 RLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQV-----------ARAG  156 (256)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhcc-----------CCCC
Confidence            7899999999764433322    333456667666544    45777667788999999976652           3445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.+|++.+.+++.++.|   .+++++.|+||.|.+..
T Consensus       157 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~  197 (256)
T PRK06124        157 DAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATET  197 (256)
T ss_pred             ccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcc
Confidence            689999999999999999987   48999999999877754

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.5e-23  Score=179.83  Aligned_cols=166  Identities=14%  Similarity=0.124  Sum_probs=126.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      ||+++||||+||||++++++|+++|++|++++|+..+   ..+ +.+     ..+.++.+|++|.++++++++.     +
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~---~~~-~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   71 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAED---VEA-LAA-----AGFTAVQLDVNDGAALARLAEELEAEHG   71 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHH---HHH-HHH-----CCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            5899999999999999999999999999999964322   211 111     1467889999999999888765     5


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||........    +..+..++.|+.++..    +++.|.+ +.++||++||.+.+.           +.+.
T Consensus        72 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~g~iv~isS~~~~~-----------~~~~  139 (274)
T PRK05693         72 GLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRR-SRGLVVNIGSVSGVL-----------VTPF  139 (274)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-cCCEEEEECCccccC-----------CCCC
Confidence            799999999976544332    2334456677777544    5555544 347899999976652           3345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccce
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVAF  256 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~~  256 (267)
                      ...|+.+|++.+.++++++.|   .|+++++++||.|.|.+..
T Consensus       140 ~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~  182 (274)
T PRK05693        140 AGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFAS  182 (274)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccccc
Confidence            678999999999999999887   6899999999999886543

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.6e-23  Score=175.54  Aligned_cols=175  Identities=13%  Similarity=0.093  Sum_probs=130.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+++||||+||||++++++|+++|++|++++|+..+.++..+.+.+. ..+.+++++++|++|.+++++++++     ++
T Consensus         3 k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          3 QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLAR-YPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhh-CCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999997543332222222221 1134788999999999999888775     57


Q ss_pred             CCEEEEccccCCcCCCc----cChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|++|||||+.......    +..+..++.|+.+...    +++.|.+.+.++||++||......          ...+.
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~~~~~  151 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRG----------LPGVK  151 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccC----------CCCCc
Confidence            99999999986544322    2233456677776444    555666777789999999665421          11235


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccce
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVAF  256 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~~  256 (267)
                      ..|+.||++++.+++.++.+   .++++++++||+|.|....
T Consensus       152 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~  193 (248)
T PRK08251        152 AAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNA  193 (248)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhh
Confidence            78999999999999999977   4799999999988775443

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.6e-23  Score=179.62  Aligned_cols=172  Identities=21%  Similarity=0.198  Sum_probs=127.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+++||||+|+||+++++.|+++|++|++++|+....+...+.+.+.. ...++.++++|++|++++++++++     ++
T Consensus         8 k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (276)
T PRK05875          8 RTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALK-GAGAVRYEPADVTDEDQVARAVDAATAWHGR   86 (276)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcc-CCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999975433222222222211 124688899999999999888775     57


Q ss_pred             CCEEEEccccCCc-CCCc----cChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYV-GEST----LDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       146 ~D~li~~Ag~~~~-~~~~----~~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      +|+||||||.... ....    +.....++.|..+...    +++.|.+.+.++||++||.+.+.           +.++
T Consensus        87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~~  155 (276)
T PRK05875         87 LHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASN-----------THRW  155 (276)
T ss_pred             CCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcC-----------CCCC
Confidence            9999999996422 1111    1223445566666544    44556656668999999988763           3455


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .+.|+.+|++.+.+++.++++   .++++++++||.+.+..
T Consensus       156 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~  196 (276)
T PRK05875        156 FGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDL  196 (276)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcc
Confidence            789999999999999999987   46999999999887654

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.4e-23  Score=175.42  Aligned_cols=173  Identities=16%  Similarity=0.104  Sum_probs=131.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcch-hhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGA-VKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      +|+++||||+||||++++++|+++|++|+++++.....++. .+...+....+.++.++.+|++|.++++++++.     
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (249)
T PRK12827          6 SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEF   85 (249)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            38999999999999999999999999999988644332222 222233323345788999999999999888764     


Q ss_pred             CCCCEEEEccccCCcCCCc----cChHHHHHHhHHHHHHHHHHHH-----HcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESMA-----RHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      +++|+||||||........    ++....++.|+.++..++..+.     +.+.++||++||.+.+.           +.
T Consensus        86 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~  154 (249)
T PRK12827         86 GRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVR-----------GN  154 (249)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcC-----------CC
Confidence            5799999999986533322    2334456778888777766655     55668999999977763           34


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      ++...|+.+|++.+.++++++.+   .++++++++||++.+.
T Consensus       155 ~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~  196 (249)
T PRK12827        155 RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTP  196 (249)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCC
Confidence            45778999999999999999987   4899999999976664

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=1.4e-23  Score=179.91  Aligned_cols=168  Identities=14%  Similarity=0.044  Sum_probs=123.3

Q ss_pred             CcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGas--ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +|+++||||+  +|||+++|++|+++|++|++++|+.+..+.+.+..+++    +....+++|++|+++++++++.    
T Consensus        10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~~~   85 (272)
T PRK08159         10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAEL----GAFVAGHCDVTDEASIDAVFETLEKK   85 (272)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhc----CCceEEecCCCCHHHHHHHHHHHHHh
Confidence            3899999997  89999999999999999999876422222222222222    2355789999999999998876    


Q ss_pred             -CCCCEEEEccccCCc----CCCcc----ChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYV----GESTL----DPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~----~~~~~----~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                       +++|+||||||+...    .+..+    ..+..++.|+.+...    ++|.|.  +.++||++||.+..          
T Consensus        86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~--~~g~Iv~iss~~~~----------  153 (272)
T PRK08159         86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMT--DGGSILTLTYYGAE----------  153 (272)
T ss_pred             cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcC--CCceEEEEeccccc----------
Confidence             689999999997532    12222    233445566666444    445453  24799999996554          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                       .+.+.+..|++||++.+.++++++.|   .|+++++|.||+|.|..
T Consensus       154 -~~~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~  199 (272)
T PRK08159        154 -KVMPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLA  199 (272)
T ss_pred             -cCCCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHH
Confidence             24455778999999999999999998   58999999999998854

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.91  E-value=2.1e-23  Score=176.14  Aligned_cols=170  Identities=17%  Similarity=0.160  Sum_probs=130.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+|+||++++++|+++|++|++++|+....+++.+.++   ..+.+++++++|++|.++++++++.     +
T Consensus         3 ~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   79 (250)
T TIGR03206         3 DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIR---AKGGNAQAFACDITDRDSVDTAVAAAEQALG   79 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHH---hcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999865433222222222   2245788999999999999988864     5


Q ss_pred             CCCEEEEccccCCcCCCccC----hHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|++|||||........+.    .+..++.|+.+...    +++.|.+.+.++||++||.+.+.           +.+.
T Consensus        80 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~-----------~~~~  148 (250)
T TIGR03206        80 PVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARV-----------GSSG  148 (250)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhcc-----------CCCC
Confidence            79999999997543332222    23456677777655    45556667778999999988774           3345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      ...|+.+|++.+.++++++++   .++++++++||.+++.
T Consensus       149 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~  188 (250)
T TIGR03206       149 EAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTA  188 (250)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccch
Confidence            678999999999999999988   4899999999977664

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.91  E-value=2.2e-23  Score=175.92  Aligned_cols=170  Identities=18%  Similarity=0.135  Sum_probs=128.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+|+||++++++|+++|++|++++|+...   ..+..+++...+.++.++.+|++|.+++++++++     +
T Consensus         6 ~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (251)
T PRK12826          6 GRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDD---AAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG   82 (251)
T ss_pred             CCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            3899999999999999999999999999999975432   2222233323345688999999999999998875     4


Q ss_pred             CCCEEEEccccCCcCCC----ccChHHHHHHhHHHHHHHH----HHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~----~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+|||+||.....+.    .++..+.++.|+.+...++    +.|.+.+.++||++||...++          .+.++
T Consensus        83 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~----------~~~~~  152 (251)
T PRK12826         83 RLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPR----------VGYPG  152 (251)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhc----------cCCCC
Confidence            79999999987654332    2233445667777755544    555666778999999987762          13445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFT  252 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~  252 (267)
                      ...|+.+|++++.+++.++.+   .++++++++||.+.+
T Consensus       153 ~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~  191 (251)
T PRK12826        153 LAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDT  191 (251)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCc
Confidence            778999999999999999876   589999999994433

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.4e-23  Score=176.35  Aligned_cols=168  Identities=15%  Similarity=0.140  Sum_probs=125.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+++||||+||||++++++|+++|++|++++|+....++..+.++   ..+..+.++++|++|++++++++++     ++
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIE---QFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH---hcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999999975433222222222   2235788999999999999988875     57


Q ss_pred             CCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHHH----HHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLVV----LESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~~----l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      +|+||||||.....+..+    ..+..++.|+.++..+    ++.|.+.+ .++||++||...+.           +...
T Consensus        79 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~-----------~~~~  147 (252)
T PRK07677         79 IDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWD-----------AGPG  147 (252)
T ss_pred             ccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhcc-----------CCCC
Confidence            999999998643322222    2344566777765554    44444443 47999999976652           3344


Q ss_pred             CChHHHHHHHHHHHHHHhhhc----CCCcEEEEecccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN----SDMAVMILRLVVFFT  252 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e----~g~~~~~vrp~~v~~  252 (267)
                      ...|+.||++.+.+++.++.|    +|++++.|+||.|.+
T Consensus       148 ~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~  187 (252)
T PRK07677        148 VIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIER  187 (252)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeeccccc
Confidence            678999999999999998877    489999999997764

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.91  E-value=1.2e-23  Score=183.03  Aligned_cols=181  Identities=28%  Similarity=0.360  Sum_probs=146.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      +.+++||||+||+|++++.+|++++  .+|.++|..+.......+....   ....+.++.+|+.|..++..+++  ++ 
T Consensus         4 ~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~---~~~~v~~~~~D~~~~~~i~~a~~--~~-   77 (361)
T KOG1430|consen    4 KLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF---RSGRVTVILGDLLDANSISNAFQ--GA-   77 (361)
T ss_pred             CCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc---cCCceeEEecchhhhhhhhhhcc--Cc-
Confidence            4899999999999999999999998  8999998654311111111111   35689999999999999999998  77 


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCC-CCCCCCCCCCC--CChHHHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEK-MPITEETPQAP--INPYGKAK  224 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~-~~~~e~~~~~~--~~~Y~~sK  224 (267)
                      .+||+|+...+.....+++..++.|+.+|.++++.|.+.+.+++|++||..+...... ..-+|+.|.+.  ...|+.||
T Consensus        78 ~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sK  157 (361)
T KOG1430|consen   78 VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESK  157 (361)
T ss_pred             eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHH
Confidence            8888887765555556788899999999999999999999999999999998864443 44556655553  36999999


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          225 KMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       225 ~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      +.+|.+++..+...++..+++||.       .+||||+.
T Consensus       158 a~aE~~Vl~an~~~~l~T~aLR~~-------~IYGpgd~  189 (361)
T KOG1430|consen  158 ALAEKLVLEANGSDDLYTCALRPP-------GIYGPGDK  189 (361)
T ss_pred             HHHHHHHHHhcCCCCeeEEEEccc-------cccCCCCc
Confidence            999999999886667999999999       99999875

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.91  E-value=3.2e-23  Score=174.37  Aligned_cols=171  Identities=18%  Similarity=0.135  Sum_probs=130.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+++||||+|+||++++++|+++|++|++++|+..  +...+........+.++.++.+|++|.+++.++++.     ++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGN--DCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            78999999999999999999999999999997532  222222232222345688999999999999888765     57


Q ss_pred             CCEEEEccccCCcCCCc----cChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|+||||||........    +..+..++.|+.+...    +++.|.+.+.++||++||...+.           +.+..
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~~~  149 (245)
T PRK12824         81 VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLK-----------GQFGQ  149 (245)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhcc-----------CCCCC
Confidence            99999999976433322    2333445667666444    57777777778999999987763           34456


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..|+.+|++.+++++.++.+   .++++++++||++.+..
T Consensus       150 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~  189 (245)
T PRK12824        150 TNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPM  189 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcc
Confidence            78999999999999999876   58999999999776644

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.2e-23  Score=176.79  Aligned_cols=171  Identities=15%  Similarity=0.109  Sum_probs=129.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      ++++|||||+||||++++++|+++|++|++++|+..+   ..+..+++...+..+.++.+|+++++++.++++.     +
T Consensus        10 ~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~---~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (263)
T PRK07814         10 DQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQ---LDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG   86 (263)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4899999999999999999999999999999975432   2222223222245688899999999999887775     5


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHHHHHHHHHHH----H-cCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESMA----R-HGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~----~-~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||........    +..+..++.|+.++..+.+.+.    + .+.++||++||.+...           +.+
T Consensus        87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~  155 (263)
T PRK07814         87 RLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL-----------AGR  155 (263)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC-----------CCC
Confidence            899999999975443332    3344556677777666555543    3 4568999999966542           445


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc--CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN--SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e--~g~~~~~vrp~~v~~~~  254 (267)
                      +...|+++|++++.+++.++.+  .+++++.|+||++.|..
T Consensus       156 ~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~  196 (263)
T PRK07814        156 GFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSA  196 (263)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCch
Confidence            6789999999999999999987  35899999999887753

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=2e-23  Score=176.95  Aligned_cols=170  Identities=18%  Similarity=0.126  Sum_probs=127.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+++||||+||||++++++|+++|++|++++|...  +...+..+++...+.++.++++|++|++++.++++.     ++
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDD--EELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGR   80 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCch--hHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            78999999999999999999999999999997432  222222233222245788999999999999888765     57


Q ss_pred             CCEEEEccccCCcC--C----CccChHHHHHHhHHHHHHHHH----HHHHcC------CCEEEEEeccccccCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVG--E----STLDPLKYYHNITSNTLVVLE----SMARHG------VDTLIYSSTCATYGEPEKMPIT  209 (267)
Q Consensus       146 ~D~li~~Ag~~~~~--~----~~~~~~~~~~~~~~~~~~~l~----~~~~~~------~~~iV~vSS~~~~g~~~~~~~~  209 (267)
                      +|++|||||.....  .    ..+..++.++.|+.++..++.    .|.+..      .++||++||...+.        
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--------  152 (256)
T PRK12745         81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIM--------  152 (256)
T ss_pred             CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhcc--------
Confidence            99999999975321  1    123334556777777666544    444432      45799999977653        


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          210 EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       210 e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                         +.++.+.|+.+|++.+.+++.++.+   +|+++++++||.+.+.
T Consensus       153 ---~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~  196 (256)
T PRK12745        153 ---VSPNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTD  196 (256)
T ss_pred             ---CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCc
Confidence               3445778999999999999999986   7899999999977664

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.6e-23  Score=176.28  Aligned_cols=167  Identities=14%  Similarity=0.121  Sum_probs=126.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc--CCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--NAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--~~~D  147 (267)
                      |++++||||+||||++++++|+++|++|++++|+..   .. +.+.+   ...++.++.+|++|.+++++++++  ..+|
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~---~~-~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d   73 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQS---VL-DELHT---QSANIFTLAFDVTDHPGTKAALSQLPFIPE   73 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHH---HH-HHHHH---hcCCCeEEEeeCCCHHHHHHHHHhcccCCC
Confidence            478999999999999999999999999999997432   22 22222   124678899999999999999886  3579


Q ss_pred             EEEEccccCCcCC----CccChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCCCCChHH
Q 024488          148 AVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYG  221 (267)
Q Consensus       148 ~li~~Ag~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~  221 (267)
                      ++|||||......    ..+..++.++.|..++.+++..+...  ..++||++||.+..           .+.+....|+
T Consensus        74 ~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~-----------~~~~~~~~Y~  142 (240)
T PRK06101         74 LWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASE-----------LALPRAEAYG  142 (240)
T ss_pred             EEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhc-----------cCCCCCchhh
Confidence            9999998643222    11223456778888877777665542  34689999996543           1344577899


Q ss_pred             HHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          222 KAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       222 ~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ++|++++.+++.++.|   .|+++++++||+|.|..
T Consensus       143 asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~  178 (240)
T PRK06101        143 ASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPL  178 (240)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCC
Confidence            9999999999999865   68999999999777654

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.91  E-value=1.6e-23  Score=165.48  Aligned_cols=166  Identities=19%  Similarity=0.183  Sum_probs=132.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +.+||||||++|||+++|++|.+.|-+|++++|+   .+.+.+...+    .+.+....||+.|.++.+++++.     .
T Consensus         5 gnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~---e~~L~e~~~~----~p~~~t~v~Dv~d~~~~~~lvewLkk~~P   77 (245)
T COG3967           5 GNTILITGGASGIGLALAKRFLELGNTVIICGRN---EERLAEAKAE----NPEIHTEVCDVADRDSRRELVEWLKKEYP   77 (245)
T ss_pred             CcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCc---HHHHHHHHhc----CcchheeeecccchhhHHHHHHHHHhhCC
Confidence            3899999999999999999999999999999964   3344333332    35677889999999988887765     5


Q ss_pred             CCCEEEEccccCCcCC------CccChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGE------STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~------~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      .+++||||||+...-+      +.++.++.+..|..+    +..++|.+.++....||++||.-.+           .|.
T Consensus        78 ~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLaf-----------vPm  146 (245)
T COG3967          78 NLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAF-----------VPM  146 (245)
T ss_pred             chheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEecccccc-----------Ccc
Confidence            7999999999864322      223345566677766    5557888888878899999997776           366


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      .....|+++|++...++.+++++   .+++|+-+-|+.|-+.
T Consensus       147 ~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         147 ASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             cccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            66789999999999999999987   5899999999977765

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.91  E-value=2.3e-23  Score=177.48  Aligned_cols=167  Identities=16%  Similarity=0.142  Sum_probs=124.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+..   .+.+ +.+.  .+.++.++++|++|.+++++++++     +
T Consensus         5 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~-l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (262)
T TIGR03325         5 GEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAA---GLQE-LEAA--HGDAVVGVEGDVRSLDDHKEAVARCVAAFG   78 (262)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH---HHHH-HHhh--cCCceEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            389999999999999999999999999999986432   2222 2211  134688899999999999888765     6


Q ss_pred             CCCEEEEccccCCc-CCCcc--------ChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYV-GESTL--------DPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (267)
Q Consensus       145 ~~D~li~~Ag~~~~-~~~~~--------~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~  211 (267)
                      ++|+||||||+... .+..+        ..++.++.|+.++    +.++|.|.+.+ ++||++||...+.          
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~----------  147 (262)
T TIGR03325        79 KIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFY----------  147 (262)
T ss_pred             CCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceec----------
Confidence            89999999997421 11111        1234556666664    44566665544 6889988866552          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhcC--CCcEEEEecccccccc
Q 024488          212 TPQAPINPYGKAKKMAEDIILDFSKNS--DMAVMILRLVVFFTLV  254 (267)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~a~e~--g~~~~~vrp~~v~~~~  254 (267)
                       +.+....|+.||++++.+++.++.|+  .++++.|.||+|.|.+
T Consensus       148 -~~~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~  191 (262)
T TIGR03325       148 -PNGGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDL  191 (262)
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCC
Confidence             34456789999999999999999983  3899999999998865

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.91  E-value=8e-25  Score=175.54  Aligned_cols=169  Identities=20%  Similarity=0.206  Sum_probs=136.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++++|||.||||++++++|+++|..+.+++.+.++.+.. ..+++..+ ...+.|+++|+++..++++++++     +
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~-akL~ai~p-~~~v~F~~~DVt~~~~~~~~f~ki~~~fg   82 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAI-AKLQAINP-SVSVIFIKCDVTNRGDLEAAFDKILATFG   82 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHH-HHHhccCC-CceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence            49999999999999999999999999888887555443222 22333322 35789999999999999999987     8


Q ss_pred             CCCEEEEccccCCcCCCccChHHHHHHhHHH----HHHHHHHHHHcC---CCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLKYYHNITSN----TLVVLESMARHG---VDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~---~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      .+|++||+||+..    +.+.+..+..|..+    |...+|+|.+..   +|-||++||++.+           +|.+-.
T Consensus        83 ~iDIlINgAGi~~----dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL-----------~P~p~~  147 (261)
T KOG4169|consen   83 TIDILINGAGILD----DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGL-----------DPMPVF  147 (261)
T ss_pred             ceEEEEccccccc----chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccccc-----------Cccccc
Confidence            9999999999875    33455556666554    778999998764   5789999998887           377778


Q ss_pred             ChHHHHHHHHHHHHHHhhhc-----CCCcEEEEeccccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN-----SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e-----~g~~~~~vrp~~v~~~~~  255 (267)
                      ..|++||++...|+++++..     .|+++..++||++.+.+.
T Consensus       148 pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~  190 (261)
T KOG4169|consen  148 PVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLA  190 (261)
T ss_pred             hhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHH
Confidence            89999999999999998876     599999999999888544

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.91  E-value=2.9e-23  Score=176.89  Aligned_cols=167  Identities=13%  Similarity=0.132  Sum_probs=125.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||++|||++++++|+++|++|++++|+..   .+.+..++.   +.++.++++|++|.+++++++++     +
T Consensus         6 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   79 (263)
T PRK06200          6 GQVALITGGGSGIGRALVERFLAEGARVAVLERSAE---KLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAFG   79 (263)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhcC
Confidence            389999999999999999999999999999996432   222222222   34678899999999999888775     5


Q ss_pred             CCCEEEEccccCCc-CCCcc-C-------hHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYV-GESTL-D-------PLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (267)
Q Consensus       145 ~~D~li~~Ag~~~~-~~~~~-~-------~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~  211 (267)
                      ++|+||||||+... .+..+ .       .+..++.|+.+    ++.+++.|.+. .++||++||.+.+.          
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~----------  148 (263)
T PRK06200         80 KLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFY----------  148 (263)
T ss_pred             CCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcC----------
Confidence            89999999997532 12111 1       22334556555    44466666554 37999999987763          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc--CCCcEEEEecccccccc
Q 024488          212 TPQAPINPYGKAKKMAEDIILDFSKN--SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~a~e--~g~~~~~vrp~~v~~~~  254 (267)
                       +.++...|+.||++++.++++++.|  .+++++.|.||+|.|.+
T Consensus       149 -~~~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~  192 (263)
T PRK06200        149 -PGGGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDL  192 (263)
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCC
Confidence             3445678999999999999999998  35999999999998865

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=6e-23  Score=172.45  Aligned_cols=171  Identities=19%  Similarity=0.175  Sum_probs=130.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      ++++||||+|+||++++++|+++|++|++++|+....   .+...++...+.++.++.+|++++++++++++.     ++
T Consensus         8 ~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          8 KNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENL---KAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999999754322   222222222345788999999999999888874     58


Q ss_pred             CCEEEEccccCCcCCCc----cChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|+||||||........    +..++.++.|+.++..    +++.+.+.+.+++|++||.+.+.           +.++.
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~~~~~  153 (239)
T PRK07666         85 IDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQK-----------GAAVT  153 (239)
T ss_pred             ccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhcc-----------CCCCC
Confidence            99999999976443322    2224456777776544    44555566778999999977653           34456


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ..|+.+|++.+.+++.++.+   .|+++++++||.|.+...
T Consensus       154 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~  194 (239)
T PRK07666        154 SAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMA  194 (239)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcch
Confidence            78999999999999999876   689999999998777543

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=4.2e-23  Score=175.25  Aligned_cols=172  Identities=17%  Similarity=0.115  Sum_probs=129.7

Q ss_pred             cEEEEEcCCC--hhHHHHHHHHHhCCCeEEEEecCCCC--------CcchhhhhhhcCCCCCceEEEEccCCCHHHHHHH
Q 024488           71 THVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRG--------NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF  140 (267)
Q Consensus        71 k~vlVTGasg--gIG~~la~~L~~~G~~V~~~~r~~~~--------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~  140 (267)
                      |++|||||+|  |||.+++++|+++|++|++++|++.+        ..+..+..+++...+.+++++++|+++.++++++
T Consensus         6 k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   85 (256)
T PRK12748          6 KIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRV   85 (256)
T ss_pred             cEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            8999999995  89999999999999999999875211        1111111222222345789999999999999888


Q ss_pred             hhc-----CCCCEEEEccccCCcCCCc----cChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEEeccccccCCCCCC
Q 024488          141 FSE-----NAFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESMA----RHGVDTLIYSSTCATYGEPEKMP  207 (267)
Q Consensus       141 ~~~-----~~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~----~~~~~~iV~vSS~~~~g~~~~~~  207 (267)
                      ++.     +++|+||||||.....+..    +..+..++.|+.++..++..+.    +...++||++||...+.      
T Consensus        86 ~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~------  159 (256)
T PRK12748         86 FYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG------  159 (256)
T ss_pred             HHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC------
Confidence            775     6799999999975433322    2334556788888766665543    44567999999987764      


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          208 ITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       208 ~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                           +.+....|+.+|++++.+++.++.+   .+++++.++||.+.+.
T Consensus       160 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~  203 (256)
T PRK12748        160 -----PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTG  203 (256)
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCC
Confidence                 4455778999999999999999887   5899999999988764

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=3.9e-23  Score=173.81  Aligned_cols=171  Identities=18%  Similarity=0.098  Sum_probs=128.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+|+||++++++|+++|++|+++.++..  +...+........+.++.++.+|++|.+++++++++     +
T Consensus         6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDE--EAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCH--HHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            489999999999999999999999999988775322  222222222222245688999999999999988764     5


Q ss_pred             CCCEEEEccccCCcCCC----ccChHHHHHHhHHHHHHHH----HHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~----~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|++||+||.......    .+..++.++.|+.+..+++    +.+.+.+.+++|++||...+.           +..+
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~-----------~~~~  152 (249)
T PRK12825         84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLP-----------GWPG  152 (249)
T ss_pred             CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCC-----------CCCC
Confidence            79999999997644332    2233445666777655544    445667778999999987763           3345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      ...|+.+|++.+.+++.++++   .+++++++|||.+++.
T Consensus       153 ~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~  192 (249)
T PRK12825        153 RSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTD  192 (249)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCC
Confidence            778999999999999999887   6899999999966553

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.91  E-value=4.1e-23  Score=175.32  Aligned_cols=167  Identities=17%  Similarity=0.140  Sum_probs=127.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+..   ...+..++.   ...+.++.+|++|.++++++++.     +
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~---~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPA---RARLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVERFG   79 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHH---HHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999986432   233322232   23588899999999999988875     5


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHHHHHHHHH----HHHcC-CCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLES----MARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~~l~~----~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||.....+..    +..+..++.|+.++..++..    |.+++ .++||++||.....           +.+
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~  148 (257)
T PRK07067         80 GIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR-----------GEA  148 (257)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC-----------CCC
Confidence            799999999976433322    33445567777776555544    44433 46999999965431           345


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      +...|+.||++.+.+++.++.|   .|+++++++||+|.+.
T Consensus       149 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~  189 (257)
T PRK07067        149 LVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTP  189 (257)
T ss_pred             CCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccch
Confidence            6789999999999999999986   6899999999977664

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.91  E-value=5.2e-23  Score=173.62  Aligned_cols=171  Identities=19%  Similarity=0.208  Sum_probs=129.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+|+||++++++|+++|++|++++|+...   ..+..+++...+.++.++.+|++|.++++++++.     +
T Consensus         7 ~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (250)
T PRK12939          7 GKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAE---ARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALG   83 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999864332   2222233322245788999999999999988865     5


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||........+    ..+..++.|+.++..    +++.|.+++.++||++||...+.           +.+.
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  152 (250)
T PRK12939         84 GLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALW-----------GAPK  152 (250)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhcc-----------CCCC
Confidence            8999999999865433222    223445567766544    45555566678999999977653           3445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.+|++.+.+++.++.+   .+++++.++||.+.+..
T Consensus       153 ~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~  193 (250)
T PRK12939        153 LGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEA  193 (250)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCcc
Confidence            678999999999999999876   58999999999887754

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=5.6e-23  Score=179.14  Aligned_cols=170  Identities=16%  Similarity=0.107  Sum_probs=126.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~  145 (267)
                      +|+++||||+||||++++++|+++|++|+++++..  .+...+..+++...+.++.++.+|++|.++++++++.    ++
T Consensus        12 ~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~--~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~   89 (306)
T PRK07792         12 GKVAVVTGAAAGLGRAEALGLARLGATVVVNDVAS--ALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG   89 (306)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCc--hhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence            49999999999999999999999999999988632  2223333333333356788999999999999988875    68


Q ss_pred             CCEEEEccccCCcCCCc----cChHHHHHHhHHHHHHH----HHHHHHc-------CCCEEEEEeccccccCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVV----LESMARH-------GVDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~~----l~~~~~~-------~~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                      +|+||||||+.......    ++.+..++.|+.++..+    ++.|.+.       ..++||++||.+.+.         
T Consensus        90 iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------  160 (306)
T PRK07792         90 LDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV---------  160 (306)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc---------
Confidence            99999999986543322    23344556777765554    4455432       126999999977652         


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                        +.+....|+.+|++++.+++.++.|   +|+++++|.|+. .+.
T Consensus       161 --~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~  203 (306)
T PRK07792        161 --GPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTA  203 (306)
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCc
Confidence              3345678999999999999999987   689999999983 443

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.91  E-value=6.3e-23  Score=173.79  Aligned_cols=163  Identities=18%  Similarity=0.163  Sum_probs=126.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+...         +  ..+.++.++++|++|.++++++++.     +
T Consensus         6 ~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~---------~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   74 (252)
T PRK07856          6 GRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE---------T--VDGRPAEFHAADVRDPDQVAALVDAIVERHG   74 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh---------h--hcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3999999999999999999999999999999974321         0  1134678899999999999888865     5


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHHHHHHHHH----HHHc-CCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLES----MARH-GVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~~l~~----~~~~-~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||........    +..+..++.|+.++..++..    |.++ +.++||++||.+.+.           +.+
T Consensus        75 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~-----------~~~  143 (252)
T PRK07856         75 RLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR-----------PSP  143 (252)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC-----------CCC
Confidence            789999999975433322    22344566777776555544    4443 357999999977652           445


Q ss_pred             CCChHHHHHHHHHHHHHHhhhcC--CCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKNS--DMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e~--g~~~~~vrp~~v~~~~  254 (267)
                      ....|+.+|++.+.+++.++.|+  .++++.++||.|.|..
T Consensus       144 ~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~  184 (252)
T PRK07856        144 GTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQ  184 (252)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChH
Confidence            67899999999999999999873  3899999999887754

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.91  E-value=4.5e-23  Score=173.56  Aligned_cols=172  Identities=25%  Similarity=0.271  Sum_probs=129.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      .|+++||||+|+||++++++|+++|++|+++.++.  .....+..+++...+.++.++.+|++|.+++++++++     +
T Consensus         5 ~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (245)
T PRK12937          5 NKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGS--AAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG   82 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCC--HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999887532  2222222233323345788999999999999998875     5


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~  218 (267)
                      ++|+||||||.....+..+    ..+..++.|+.++..++..+.+.  ..++||++||.+.+.           +.++..
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~~~~~~  151 (245)
T PRK12937         83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIAL-----------PLPGYG  151 (245)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccC-----------CCCCCc
Confidence            7999999999754333222    23344567777766655555432  246999999976652           455678


Q ss_pred             hHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          219 PYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       219 ~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .|+.+|.+++.+++.++++   .+++++.++||++.|..
T Consensus       152 ~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~  190 (245)
T PRK12937        152 PYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATEL  190 (245)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCch
Confidence            9999999999999999887   47999999999887754

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.91  E-value=5.8e-23  Score=174.95  Aligned_cols=171  Identities=15%  Similarity=0.125  Sum_probs=131.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      ++++|||||+||||++++++|+++|++|++++|+..+.++.   .+++...+.++.++.+|++|.++++++++.     +
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~---~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   77 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASL---AQELADHGGEALVVPTDVSDAEACERLIEAAVARFG   77 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            37899999999999999999999999999999754332222   222322345788899999999999888875     5


Q ss_pred             CCCEEEEccccCCcCCCccC-----hHHHHHHhHHHHHHHHHHHHH---cCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLD-----PLKYYHNITSNTLVVLESMAR---HGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~---~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||........+.     ..+.++.|+.++..++..+.+   .+.++||++||...+.           +.++
T Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  146 (263)
T PRK06181         78 GIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLT-----------GVPT  146 (263)
T ss_pred             CCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccC-----------CCCC
Confidence            79999999997654433322     344567788887776665532   2357999999987763           4455


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.+|++.+.+++.++.+   .++++++++||+|.+.+
T Consensus       147 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~  187 (263)
T PRK06181        147 RSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDI  187 (263)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCc
Confidence            789999999999999999876   58999999999887754

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.6e-23  Score=174.27  Aligned_cols=172  Identities=15%  Similarity=0.115  Sum_probs=128.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc--CCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--NAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--~~~D  147 (267)
                      ||+++||||+||||++++++|+++|++|++++|+..+.+...+.+..  ..+.++.++++|++|+++++++++.  ..+|
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d   78 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRA--RGAVAVSTHELDILDTASHAAFLDSLPALPD   78 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHH--hcCCeEEEEecCCCChHHHHHHHHHHhhcCC
Confidence            58999999999999999999999999999999754333222222221  1134788999999999999988875  3579


Q ss_pred             EEEEccccCCcCCCc----cChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCCh
Q 024488          148 AVMHFAAVAYVGEST----LDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~  219 (267)
                      ++|||||........    ++..+.++.|+.++..    +++.|.+.+.++||++||.....           +.+....
T Consensus        79 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~  147 (243)
T PRK07102         79 IVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDR-----------GRASNYV  147 (243)
T ss_pred             EEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccC-----------CCCCCcc
Confidence            999999975433322    2233456677777554    44556666778999999965432           2344668


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          220 YGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       220 Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      |+.+|++.++++++++.|   .|+++++++||.|.+..
T Consensus       148 Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~  185 (243)
T PRK07102        148 YGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPM  185 (243)
T ss_pred             cHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChh
Confidence            999999999999999876   58999999999777653

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=4.9e-23  Score=175.07  Aligned_cols=167  Identities=17%  Similarity=0.103  Sum_probs=123.5

Q ss_pred             CcEEEEEcC--CChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGa--sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +|+++||||  ++|||++++++|+++|++|++++|+. +.+...+..+++   +.++.++.+|++|+++++++++.    
T Consensus         7 ~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~-~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~~~   82 (256)
T PRK07889          7 GKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGR-ALRLTERIAKRL---PEPAPVLELDVTNEEHLASLADRVREH   82 (256)
T ss_pred             CCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCcc-chhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHHHHHHH
Confidence            389999999  89999999999999999999998642 112222222222   23577899999999999988865    


Q ss_pred             -CCCCEEEEccccCCc----CCCcc-Ch---HHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYV----GESTL-DP---LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~----~~~~~-~~---~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                       +++|+||||||+...    .+..+ +.   +..++.|+.+    ++.++|.|.+  .++||++|+.+..          
T Consensus        83 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~~~----------  150 (256)
T PRK07889         83 VDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDATV----------  150 (256)
T ss_pred             cCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeecccc----------
Confidence             689999999998632    11222 22   2335666665    4456777753  3689998864332          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                        +.+.+..|++||++.+.|+++++.|   .|+++++|.||+|.|..
T Consensus       151 --~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~  195 (256)
T PRK07889        151 --AWPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLA  195 (256)
T ss_pred             --cCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChh
Confidence              2345678999999999999999998   68999999999998854

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.91  E-value=7.6e-23  Score=172.98  Aligned_cols=162  Identities=19%  Similarity=0.187  Sum_probs=127.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+|+||++++++|+++|++|++++|+.         ..   ..+.++.++++|++|.+++++++++     +
T Consensus         8 ~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (252)
T PRK08220          8 GKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LT---QEDYPFATFVLDVSDAAAVAQVCQRLLAETG   75 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hh---hcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999999643         11   1134688899999999999998875     5


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||.....+..    +..+..++.|+.+...    +++.|.+++.++||++||.....           +..+
T Consensus        76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~-----------~~~~  144 (252)
T PRK08220         76 PLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV-----------PRIG  144 (252)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc-----------CCCC
Confidence            799999999986443322    2334456667666444    45556666778999999976542           4456


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.+|++.+.+++.+++|   +++++++++||.+.+..
T Consensus       145 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~  185 (252)
T PRK08220        145 MAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDM  185 (252)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchh
Confidence            789999999999999999988   78999999999776643

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.91  E-value=7.3e-23  Score=173.68  Aligned_cols=171  Identities=15%  Similarity=0.130  Sum_probs=128.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+..   ++.+...++...+.++.++.+|+++.+++++++++     +
T Consensus         9 ~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~---~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (258)
T PRK06949          9 GKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVE---RLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG   85 (258)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            399999999999999999999999999999997543   22222222222244688999999999999988875     5


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHH----HHHHHHHcC--------CCEEEEEeccccccCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLV----VLESMARHG--------VDTLIYSSTCATYGEPEKMPI  208 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~----~l~~~~~~~--------~~~iV~vSS~~~~g~~~~~~~  208 (267)
                      ++|+||||||........+    ..+..++.|+.+...    +++.|.+..        .++||++||.+.+.       
T Consensus        86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-------  158 (258)
T PRK06949         86 TIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR-------  158 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccC-------
Confidence            7999999999754433222    233445566555444    455555443        36999999987763       


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          209 TEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                          +.+...+|+.+|++.+.+++.++.+   .++++++|+||+|.|..
T Consensus       159 ----~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~  203 (258)
T PRK06949        159 ----VLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEI  203 (258)
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCc
Confidence                4455789999999999999999887   58999999999776644

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.91  E-value=5.3e-23  Score=175.51  Aligned_cols=159  Identities=18%  Similarity=0.190  Sum_probs=123.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++++....+            ..++.++.+|++|+++++++++.     +
T Consensus         9 ~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   76 (266)
T PRK06171          9 GKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ------------HENYQFVPTDVSSAEEVNHTVAEIIEKFG   76 (266)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc------------cCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999986443211            23577899999999999988875     6


Q ss_pred             CCCEEEEccccCCcCC-------------CccChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGE-------------STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMP  207 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~-------------~~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~  207 (267)
                      ++|+||||||......             ..+..+..++.|+.++..    +++.|.+.+.++||++||.+.+.      
T Consensus        77 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------  150 (266)
T PRK06171         77 RIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLE------  150 (266)
T ss_pred             CCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccC------
Confidence            8999999999753221             111223345566666444    55666666678999999977652      


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccc
Q 024488          208 ITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFF  251 (267)
Q Consensus       208 ~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~  251 (267)
                           +.+....|+.+|++++.+++.++.|   .|+++++|+||.+.
T Consensus       151 -----~~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~  192 (266)
T PRK06171        151 -----GSEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE  192 (266)
T ss_pred             -----CCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence                 3445789999999999999999987   58999999999775

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.91  E-value=6.1e-23  Score=173.16  Aligned_cols=166  Identities=19%  Similarity=0.178  Sum_probs=125.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+|+||++++++|+++|++|++++|+.   +...+..+++   +.++.++++|++|.+++..+++.     +
T Consensus         6 ~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~---~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (249)
T PRK06500          6 GKTALITGGTSGIGLETARQFLAEGARVAITGRDP---ASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAFG   79 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCH---HHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            38999999999999999999999999999998642   2222322332   34678899999999988877664     5


Q ss_pred             CCCEEEEccccCCcCCC----ccChHHHHHHhHHHHHHHHHHHHH--cCCCEEEEEeccc-cccCCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLVVLESMAR--HGVDTLIYSSTCA-TYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~iV~vSS~~-~~g~~~~~~~~e~~~~~~~  217 (267)
                      ++|+||||||.....+.    .+..+..++.|+.++..++..+.+  ...+++|++||.+ .++            .+..
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~------------~~~~  147 (249)
T PRK06500         80 RLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIG------------MPNS  147 (249)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccC------------CCCc
Confidence            79999999997544332    234455677888887777776653  2346788877744 442            3456


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      ..|+.+|++.+.++++++.|   .|+++++++||.+.+.
T Consensus       148 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~  186 (249)
T PRK06500        148 SVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTP  186 (249)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCH
Confidence            89999999999999999887   4899999999966553

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.91  E-value=6.6e-23  Score=174.27  Aligned_cols=175  Identities=17%  Similarity=0.170  Sum_probs=129.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+|+||.+++++|+++|++|++++|+..+   ..+..+++...+.++.++++|++|+++++++++.     +
T Consensus        12 ~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~---~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~   88 (259)
T PRK08213         12 GKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEE---LEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFG   88 (259)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            3899999999999999999999999999999975432   2222223322345788899999999999877764     5


Q ss_pred             CCCEEEEccccCCcCCCccCh----HHHHHHhHHHHHHHHHHHH-----HcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVVLESMA-----RHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~-----~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||........+.+    ++.++.|+.++..++..+.     +.+.++||++||...+.....       ...
T Consensus        89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~-------~~~  161 (259)
T PRK08213         89 HVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP-------EVM  161 (259)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc-------ccc
Confidence            799999999975433333222    3456677777777666543     335679999999766532110       113


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...|+.+|++.+.++++++++   .|+++++++||++.+..
T Consensus       162 ~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~  203 (259)
T PRK08213        162 DTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKM  203 (259)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcc
Confidence            4578999999999999999887   57999999999777643

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.91  E-value=9e-23  Score=173.76  Aligned_cols=170  Identities=16%  Similarity=0.094  Sum_probs=127.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+..    ..+..+++...+.++.++.+|++++++++++++.     +
T Consensus         6 ~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   81 (263)
T PRK08226          6 GKTALITGALQGIGEGIARVFARHGANLILLDISPE----IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEG   81 (263)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH----HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999987432    2222222222245678899999999999988875     5


Q ss_pred             CCCEEEEccccCCcCCCccChH----HHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPL----KYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||........+.+.    +.++.|+.+...    +++.|.+.+.++||++||.....          .+.+.
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------~~~~~  151 (263)
T PRK08226         82 RIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDM----------VADPG  151 (263)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc----------cCCCC
Confidence            8999999999865444333333    345666666544    44555555667999999965421          13345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      ...|+.+|++.+.+++.++.+   .+++++.++||.+.|.
T Consensus       152 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~  191 (263)
T PRK08226        152 ETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTP  191 (263)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCH
Confidence            678999999999999999987   4799999999988774

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.91  E-value=6.9e-23  Score=173.63  Aligned_cols=168  Identities=19%  Similarity=0.175  Sum_probs=128.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+|+||++++++|+++|++|++++|+..    ..+...+..  ...+.++++|++++++++++++.     +
T Consensus        15 ~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~----~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   88 (255)
T PRK06841         15 GKVAVVTGGASGIGHAIAELFAAKGARVALLDRSED----VAEVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAFG   88 (255)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            389999999999999999999999999999997532    112222221  24567899999999999988875     5


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||.....+..+    ..+..++.|+.+...    +++.|.+.+.++||++||.+...           +.+.
T Consensus        89 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  157 (255)
T PRK06841         89 RIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVV-----------ALER  157 (255)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhcc-----------CCCC
Confidence            7999999999864433222    223456677776554    45555566678999999976542           3445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.+|++.+.+++.++.+   .|++++.|+||+|.+..
T Consensus       158 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~  198 (255)
T PRK06841        158 HVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTEL  198 (255)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcc
Confidence            678999999999999999988   58999999999887754

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=9.4e-23  Score=172.31  Aligned_cols=172  Identities=15%  Similarity=0.110  Sum_probs=128.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      ++++|||||+||||++++++|+++|++|++..+..  .+...+.++.+...+.++.++.+|+++++++++++++     +
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKR--AEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG   83 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCC--hHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999998876522  2222233333322244677899999999999888775     5


Q ss_pred             CCCEEEEccccCCcCCCccCh----HHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~  218 (267)
                      ++|+||||||.....+..+.+    +..++.|+.++..++..+.+.  ..++||++||.+.+.           +.++..
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~  152 (252)
T PRK06077         84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIR-----------PAYGLS  152 (252)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccC-----------CCCCch
Confidence            799999999985544433222    344566777655544444322  236999999988874           556788


Q ss_pred             hHHHHHHHHHHHHHHhhhcC--CCcEEEEecccccccc
Q 024488          219 PYGKAKKMAEDIILDFSKNS--DMAVMILRLVVFFTLV  254 (267)
Q Consensus       219 ~Y~~sK~a~e~l~~~~a~e~--g~~~~~vrp~~v~~~~  254 (267)
                      .|+.+|++.+.+++.+++++  ++++.+++||+|.+..
T Consensus       153 ~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~  190 (252)
T PRK06077        153 IYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKL  190 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChH
Confidence            99999999999999999984  7899999999887754

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.91  E-value=8.7e-23  Score=174.26  Aligned_cols=167  Identities=16%  Similarity=0.078  Sum_probs=125.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+...   ..+..+++...+.++.++.+|++|.+++++++++     +
T Consensus         9 ~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~   85 (264)
T PRK07576          9 GKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEK---VDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFG   85 (264)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999975432   2222222222234678899999999999988876     5


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHHHHHHH----HHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~~l----~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||........    +..+..++.|+.++..++    +.|.+. .++||++||.+.+.           +.+.
T Consensus        86 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~-----------~~~~  153 (264)
T PRK07576         86 PIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFV-----------PMPM  153 (264)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhcc-----------CCCC
Confidence            799999999865333222    223345567777755544    444444 37999999976652           4455


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFF  251 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~  251 (267)
                      ...|+.+|++.+.++++++.+   .+++++.++||.+.
T Consensus       154 ~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~  191 (264)
T PRK07576        154 QAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIA  191 (264)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence            789999999999999999887   57999999999765

>PRK12742 oxidoreductase; Provisional

Probab=99.91  E-value=9.3e-23  Score=170.90  Aligned_cols=168  Identities=18%  Similarity=0.188  Sum_probs=124.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (267)
                      +|+||||||+||||++++++|+++|++|+++.+.  +.+...+..++.     .+.++.+|++|.+++.++++. +++|+
T Consensus         6 ~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~--~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~id~   78 (237)
T PRK12742          6 GKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAG--SKDAAERLAQET-----GATAVQTDSADRDAVIDVVRKSGALDI   78 (237)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCC--CHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHHHhCCCcE
Confidence            3899999999999999999999999999987652  222222222222     356788999999999888876 57999


Q ss_pred             EEEccccCCcCCCc----cChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHH
Q 024488          149 VMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGK  222 (267)
Q Consensus       149 li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~  222 (267)
                      ||||||........    ++.+..++.|+.+...++..+.+.  ..++||++||.....          .+.++...|+.
T Consensus        79 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----------~~~~~~~~Y~~  148 (237)
T PRK12742         79 LVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR----------MPVAGMAAYAA  148 (237)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc----------CCCCCCcchHH
Confidence            99999975433222    233455667777765554333322  347999999965421          24556789999


Q ss_pred             HHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          223 AKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       223 sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +|++++.+++.++.+   .|+++++|+||.+.|..
T Consensus       149 sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~  183 (237)
T PRK12742        149 SKSALQGMARGLARDFGPRGITINVVQPGPIDTDA  183 (237)
T ss_pred             hHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCc
Confidence            999999999999887   57999999999888754

>PRK09135 pteridine reductase; Provisional

Probab=99.91  E-value=8.1e-23  Score=172.24  Aligned_cols=171  Identities=21%  Similarity=0.209  Sum_probs=128.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCC-CCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +++|||||+||||++++++|+++|++|++++|+..  +...+..+++.. .+..+.++.+|++|.+++.++++.     +
T Consensus         7 ~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          7 KVALITGGARRIGAAIARTLHAAGYRVAIHYHRSA--AEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH--HHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            89999999999999999999999999999997432  112111111111 123578899999999999988875     5


Q ss_pred             CCCEEEEccccCCcCCC----ccChHHHHHHhHHHHHHHHHHHHH---cCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLVVLESMAR---HGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      ++|+||||||.....+.    .+..+..++.|+.++.++++.+.+   ...+.+++++|...           ..+.++.
T Consensus        85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~  153 (249)
T PRK09135         85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHA-----------ERPLKGY  153 (249)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhh-----------cCCCCCc
Confidence            79999999997544332    233456777899888887777653   23467777776332           2366778


Q ss_pred             ChHHHHHHHHHHHHHHhhhcC--CCcEEEEeccccccccceeecCC
Q 024488          218 NPYGKAKKMAEDIILDFSKNS--DMAVMILRLVVFFTLVAFVIKIN  261 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e~--g~~~~~vrp~~v~~~~~~~~Gp~  261 (267)
                      ..|+.||+++|.+++.+++++  ++++++++||       .++||.
T Consensus       154 ~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg-------~~~~~~  192 (249)
T PRK09135        154 PVYCAAKAALEMLTRSLALELAPEVRVNAVAPG-------AILWPE  192 (249)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEec-------cccCcc
Confidence            899999999999999999874  6999999999       666654

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.91  E-value=6.1e-23  Score=196.21  Aligned_cols=171  Identities=15%  Similarity=0.145  Sum_probs=134.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+..   .+.+..+++...+.++.++.+|++|.+++++++++     +
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  447 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGE---ALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG  447 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            489999999999999999999999999999997543   33333333322345788999999999999988875     5


Q ss_pred             CCCEEEEccccCCcCCCc------cChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST------LDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~------~~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      ++|+||||||........      +..+..++.|+.++    +.+++.|.+.+.++||++||.+++.           +.
T Consensus       448 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~  516 (657)
T PRK07201        448 HVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQT-----------NA  516 (657)
T ss_pred             CCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC-----------CC
Confidence            799999999975332211      23445667777774    4467778777888999999988874           34


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +....|+.||++.+.++++++.|   .|+++++|+||.|.|.+
T Consensus       517 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~  559 (657)
T PRK07201        517 PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPM  559 (657)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccc
Confidence            45778999999999999999987   58999999999888854

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.91  E-value=8.3e-23  Score=172.87  Aligned_cols=170  Identities=18%  Similarity=0.142  Sum_probs=127.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+|+||++++++|+++|++|++++|+....+.+.+.++   ..+.++.++.+|+.|.++++++++.     .
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVAT---DAGGSVIYLVADVTKEDEIADMIAAAAAEFG   77 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH---hcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3789999999999999999999999999999975433222222222   2245688899999999988877754     5


Q ss_pred             CCCEEEEccccCCcCCCccC----hHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLD----PLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+|||+||..........    .+..++.|+.++    +.+++.|.+.+.++||++||.+.+.           +.+.
T Consensus        78 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~-----------~~~~  146 (255)
T TIGR01963        78 GLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLV-----------ASPF  146 (255)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcC-----------CCCC
Confidence            69999999997654332222    233455666664    4455666777778999999976653           3344


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      ...|+.+|.+.+.+++.++.+   .+++++++|||++++.
T Consensus       147 ~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~  186 (255)
T TIGR01963       147 KSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTP  186 (255)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccH
Confidence            678999999999999999876   4899999999976653

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.91  E-value=6.2e-23  Score=174.30  Aligned_cols=174  Identities=17%  Similarity=0.138  Sum_probs=124.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC-CCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR-GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      +|+++||||+||||+++|++|+++|++|+++.++.. ..+...+..+++...+.++.++++|++|+++++++++.     
T Consensus         8 ~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (257)
T PRK12744          8 GKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAF   87 (257)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhh
Confidence            389999999999999999999999999777765432 22333333333322244788899999999999988875     


Q ss_pred             CCCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +++|+||||||........+    ..+..++.|..++..++..+.+.  ..+++++++|.....           +.+..
T Consensus        88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~-----------~~~~~  156 (257)
T PRK12744         88 GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGA-----------FTPFY  156 (257)
T ss_pred             CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcc-----------cCCCc
Confidence            58999999999854433222    33445667777766655555432  235677653322211           22346


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..|+.||++++.+++++++|   .|+++++++||.|.|..
T Consensus       157 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~  196 (257)
T PRK12744        157 SAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPF  196 (257)
T ss_pred             ccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccch
Confidence            78999999999999999988   47999999999887753

>PRK07069 short chain dehydrogenase; Validated

Probab=99.91  E-value=7.9e-23  Score=172.68  Aligned_cols=170  Identities=14%  Similarity=0.167  Sum_probs=128.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCC--CCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE--PGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +++||||+||||+++++.|+++|++|++++|+.  .+...+..+++...  ...+..+++|++|.++++++++.     +
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   78 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDIND--AAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMG   78 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCc--chHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999752  22222222222111  12355688999999999888765     6


Q ss_pred             CCCEEEEccccCCcCCCccCh----HHHHHHhHH----HHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITS----NTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~----~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||........+.+    +..++.|+.    .++.+++.|.+.+.++||++||.+.+.           +.+.
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~-----------~~~~  147 (251)
T PRK07069         79 GLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFK-----------AEPD  147 (251)
T ss_pred             CccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhcc-----------CCCC
Confidence            799999999976543332222    334455665    577899999888888999999988774           3445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---C--CCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---S--DMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~--g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.+|++.+.+++.++.|   .  +++++.++||++.|..
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~  190 (251)
T PRK07069        148 YTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGI  190 (251)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcc
Confidence            678999999999999999887   2  4889999999877754

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.91  E-value=9.3e-23  Score=172.12  Aligned_cols=173  Identities=16%  Similarity=0.184  Sum_probs=124.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|+++.+  ++.+...+..+++...+.++.++++|++|.+++++++++     +
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYA--RDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeC--CCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            489999999999999999999999999988764  222333333333322345788999999999999887764     5


Q ss_pred             CCCEEEEccccCCcCC-C----ccChHHHHHHhHHHHHHH----HHHHHHcC---CCEEEEEeccccccCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGE-S----TLDPLKYYHNITSNTLVV----LESMARHG---VDTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~-~----~~~~~~~~~~~~~~~~~~----l~~~~~~~---~~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                      ++|+||||||...... .    .++.+..+..|+.++..+    ++.+...+   .++||++||.+.+..          
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~----------  149 (248)
T PRK06947         80 RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLG----------  149 (248)
T ss_pred             CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCC----------
Confidence            7999999999754321 1    122234466777765444    44444332   467999999765411          


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .......|+.||++.+.+++.++++   .++++++++||+|.|..
T Consensus       150 ~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~  194 (248)
T PRK06947        150 SPNEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEI  194 (248)
T ss_pred             CCCCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccc
Confidence            1112457999999999999999987   48999999999888754

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.91  E-value=1.2e-22  Score=171.71  Aligned_cols=164  Identities=20%  Similarity=0.208  Sum_probs=126.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+++||||+||||.++++.|+++|++|++++|+..   .+.+...+.   +.++.++.+|++|.++++++++.     ++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~---~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~   74 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQE---RLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWRN   74 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            47999999999999999999999999999997432   222222222   34688899999999999888764     57


Q ss_pred             CCEEEEccccCCc-CC----CccChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYV-GE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       146 ~D~li~~Ag~~~~-~~----~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      +|+||||||.... .+    ..+..++.++.|+.+    ++.+++.|.+.+.++||++||.+.+.           +..+
T Consensus        75 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~  143 (248)
T PRK10538         75 IDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW-----------PYAG  143 (248)
T ss_pred             CCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC-----------CCCC
Confidence            9999999997432 11    222334456667666    56677778777778999999976542           4455


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFF  251 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~  251 (267)
                      ...|+.+|++.+++++.++.+   .++++++++||.+.
T Consensus       144 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~  181 (248)
T PRK10538        144 GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVG  181 (248)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeec
Confidence            779999999999999999887   57999999999776

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.7e-23  Score=174.17  Aligned_cols=166  Identities=16%  Similarity=0.095  Sum_probs=127.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc------
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (267)
                      |++++||||+||||++++++|+++|++|++++|+...  ..   .+   ..+.++.++++|++|.+++++++++      
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~--~~---~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   72 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP--SL---AA---AAGERLAEVELDLSDAAAAAAWLAGDLLAAF   72 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch--hh---hh---ccCCeEEEEEeccCCHHHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999975322  11   11   1234688899999999999885543      


Q ss_pred             ---CCCCEEEEccccCCc-CCCc----cChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCC
Q 024488          144 ---NAFDAVMHFAAVAYV-GEST----LDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (267)
Q Consensus       144 ---~~~D~li~~Ag~~~~-~~~~----~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~  211 (267)
                         .++|++|||||.... .+..    +..++.++.|+.+    ++.+++.|.+.+.++||++||.+.+.          
T Consensus        73 ~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------  142 (243)
T PRK07023         73 VDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARN----------  142 (243)
T ss_pred             ccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcC----------
Confidence               368999999997543 2221    2223445666666    45567777766678999999987763          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc--CCCcEEEEecccccccc
Q 024488          212 TPQAPINPYGKAKKMAEDIILDFSKN--SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~a~e--~g~~~~~vrp~~v~~~~  254 (267)
                       +.++...|+.+|++.+.+++.++.+  .++++++|+||++.|..
T Consensus       143 -~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~  186 (243)
T PRK07023        143 -AYAGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGM  186 (243)
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHH
Confidence             5566889999999999999999876  68999999999887643

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.90  E-value=5.8e-23  Score=175.55  Aligned_cols=168  Identities=18%  Similarity=0.162  Sum_probs=119.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCC-CCCceEEEEccCCCHHHHH----HHhhc--
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVN----KFFSE--  143 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~----~~~~~--  143 (267)
                      ++++||||++|||++++++|+++|++|++++|.  +.+.+.+..+++.. .+.++.++.+|++|.+++.    ++++.  
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~   79 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHR--SAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACF   79 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCC--cHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHH
Confidence            689999999999999999999999999998752  22233333333321 1345778999999987553    33322  


Q ss_pred             ---CCCCEEEEccccCCcCCCcc---------------ChHHHHHHhHHHHHH----HHHHHHHc------CCCEEEEEe
Q 024488          144 ---NAFDAVMHFAAVAYVGESTL---------------DPLKYYHNITSNTLV----VLESMARH------GVDTLIYSS  195 (267)
Q Consensus       144 ---~~~D~li~~Ag~~~~~~~~~---------------~~~~~~~~~~~~~~~----~l~~~~~~------~~~~iV~vS  195 (267)
                         +++|+||||||.....+..+               ...+.++.|+.+...    +++.|.+.      ..++||++|
T Consensus        80 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~  159 (267)
T TIGR02685        80 RAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLC  159 (267)
T ss_pred             HccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEeh
Confidence               57999999999754332211               123456777666444    45555432      135789998


Q ss_pred             ccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccc
Q 024488          196 TCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFF  251 (267)
Q Consensus       196 S~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~  251 (267)
                      |....           .+.++..+|++||++++++++.++.|   .|++++.|+||++.
T Consensus       160 s~~~~-----------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~  207 (267)
T TIGR02685       160 DAMTD-----------QPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSL  207 (267)
T ss_pred             hhhcc-----------CCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCcc
Confidence            86554           24566789999999999999999988   68999999999764

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.90  E-value=6.7e-23  Score=164.46  Aligned_cols=176  Identities=19%  Similarity=0.184  Sum_probs=133.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      ++.++||||++|||..|+++|++. |.++++..+  ++.+.+.++++.......+++.++.|+++.+++..++++     
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~--r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iV   80 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATA--RDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIV   80 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEec--CChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence            377999999999999999999876 777777765  444454555555545577999999999999999988876     


Q ss_pred             --CCCCEEEEccccCCcCCCc-c----ChHHHHHHhHHH----HHHHHHHHHHcCCC-----------EEEEEecccccc
Q 024488          144 --NAFDAVMHFAAVAYVGEST-L----DPLKYYHNITSN----TLVVLESMARHGVD-----------TLIYSSTCATYG  201 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~~~~~-~----~~~~~~~~~~~~----~~~~l~~~~~~~~~-----------~iV~vSS~~~~g  201 (267)
                        .++|+||||||+...-... +    ...+.+++|..+    ++.++|.+++...+           .|||+||.+.--
T Consensus        81 g~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~  160 (249)
T KOG1611|consen   81 GSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSI  160 (249)
T ss_pred             ccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccccc
Confidence              5899999999986432211 1    123455666555    77899998876543           799999865531


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          202 EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       202 ~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      .        .....+..+|..||+|...++++++-|   .++-++.++||||.|...
T Consensus       161 ~--------~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMg  209 (249)
T KOG1611|consen  161 G--------GFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMG  209 (249)
T ss_pred             C--------CCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCC
Confidence            0        124456889999999999999999987   567789999999998554

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.90  E-value=1.5e-22  Score=169.93  Aligned_cols=171  Identities=20%  Similarity=0.153  Sum_probs=129.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |++|||||+|+||++++++|+++|++|+++.|  ++.+...+..++....+.++.++.+|++|+++++++++.     ++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCG--PNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC--CCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999886  222333333333322245788999999999999888764     57


Q ss_pred             CCEEEEccccCCcCCCcc----ChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTL----DPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|+||||||........+    ..++.++.|+.+    ++.+++.|.+.+.++||++||.....           +....
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~~~  147 (242)
T TIGR01829        79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQK-----------GQFGQ  147 (242)
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC-----------CCCCc
Confidence            999999999764433222    233445566666    34477888877778999999965542           33456


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..|+.+|.+.+.+++.++++   .+++++.++||++.+..
T Consensus       148 ~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~  187 (242)
T TIGR01829       148 TNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDM  187 (242)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcc
Confidence            78999999999999999887   58999999999877654

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.90  E-value=7.1e-23  Score=172.74  Aligned_cols=170  Identities=18%  Similarity=0.224  Sum_probs=122.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      ++++||||+|+||++++++|+++|++|+++++.  +.+...+...++...+.++.++++|++|.++++++++.     ++
T Consensus         3 ~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06123          3 KVMIITGASRGIGAATALLAAERGYAVCLNYLR--NRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGR   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEecCC--CHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            789999999999999999999999999887642  22222222223322245678899999999999988875     57


Q ss_pred             CCEEEEccccCCcC-CC----ccChHHHHHHhHHHHHHH----HHHHHHcC---CCEEEEEeccccccCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVG-ES----TLDPLKYYHNITSNTLVV----LESMARHG---VDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       146 ~D~li~~Ag~~~~~-~~----~~~~~~~~~~~~~~~~~~----l~~~~~~~---~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                      +|+||||||..... ..    .++.+..++.|+.++..+    ++.|.+..   .++||++||.+.+.           +
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~  149 (248)
T PRK06123         81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARL-----------G  149 (248)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcC-----------C
Confidence            99999999975432 11    123345567777775554    44444332   35899999976542           1


Q ss_pred             CCC-CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          214 QAP-INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       214 ~~~-~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      .+. ...|+.+|++.+.+++.++.+   +|+++++++||.|++.
T Consensus       150 ~~~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~  193 (248)
T PRK06123        150 SPGEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTE  193 (248)
T ss_pred             CCCCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCc
Confidence            111 346999999999999999987   4899999999955543

>PRK06484 short chain dehydrogenase; Validated

Probab=99.90  E-value=1.6e-22  Score=188.45  Aligned_cols=167  Identities=23%  Similarity=0.216  Sum_probs=128.6

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      .+|++|||||++|||+++|++|+++|++|++++|+.   +.+.+..++.   +.++..+.+|++|+++++++++.     
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~  341 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDA---EGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARW  341 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHc
Confidence            359999999999999999999999999999999643   2333322222   34677889999999999988876     


Q ss_pred             CCCCEEEEccccCCc-CCCc----cChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYV-GEST----LDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~-~~~~----~~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      +++|+||||||.... .+..    +..+..++.|+.++..    +++.|  .+.++||++||.+.+.           +.
T Consensus       342 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~-----------~~  408 (520)
T PRK06484        342 GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQGGVIVNLGSIASLL-----------AL  408 (520)
T ss_pred             CCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh--ccCCEEEEECchhhcC-----------CC
Confidence            689999999997532 2222    2334456677777544    45555  3457999999987763           45


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ++...|+++|++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       409 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  451 (520)
T PRK06484        409 PPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPA  451 (520)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCch
Confidence            56789999999999999999988   48999999999888754

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.90  E-value=1.5e-22  Score=170.49  Aligned_cols=172  Identities=19%  Similarity=0.248  Sum_probs=123.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      |++++||||+||||++++++|+++|++|+++.+  ++.+...+...++...+.++.++++|++|.++++++++.     +
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   78 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQ--QNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDE   78 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC--CChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            579999999999999999999999999987542  222333333333322345688899999999999988875     6


Q ss_pred             CCCEEEEccccCCcC-CCc----cChHHHHHHhHHHHHH----HHHHHHHc---CCCEEEEEeccccccCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVG-EST----LDPLKYYHNITSNTLV----VLESMARH---GVDTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~-~~~----~~~~~~~~~~~~~~~~----~l~~~~~~---~~~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                      ++|+||||||..... ...    ++.+..++.|+.++..    +++.+.+.   ..++||++||.+.+..          
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~----------  148 (247)
T PRK09730         79 PLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLG----------  148 (247)
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccC----------
Confidence            799999999975322 111    2223456667776544    45555544   2468999999766421          


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      .......|+.+|++.+.+++.++.+   .+++++++|||++++.
T Consensus       149 ~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~  192 (247)
T PRK09730        149 APGEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTE  192 (247)
T ss_pred             CCCcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCc
Confidence            1112357999999999999999876   5899999999955554

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3e-22  Score=170.69  Aligned_cols=170  Identities=16%  Similarity=0.153  Sum_probs=128.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~  145 (267)
                      +++++||||+||||++++++|+++|++|++++|+..   ...+...++ ..+.++.++.+|++|.++++++++.    ++
T Consensus         5 ~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   80 (263)
T PRK09072          5 DKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAE---KLEALAARL-PYPGRHRWVVADLTSEAGREAVLARAREMGG   80 (263)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHhcCC
Confidence            389999999999999999999999999999997532   222333333 2345788999999999999887764    57


Q ss_pred             CCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|+||||||........+    .....++.|+.++..    +++.|.+.+.++||++||...+.           +.+..
T Consensus        81 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~  149 (263)
T PRK09072         81 INVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSI-----------GYPGY  149 (263)
T ss_pred             CCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCc-----------CCCCc
Confidence            999999999764433222    223455677777554    44555556668999999965542           33446


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..|+.+|++.+.+++.++.+   .+++++++.||++.+.+
T Consensus       150 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~  189 (263)
T PRK09072        150 ASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAM  189 (263)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccc
Confidence            78999999999999999987   57999999999887654

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.90  E-value=2.5e-23  Score=179.52  Aligned_cols=154  Identities=29%  Similarity=0.370  Sum_probs=123.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||+|+||.+++++|.++|++|+.+.|.                        .+|++|.+++.+++++.++|+||
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~------------------------~~dl~d~~~~~~~~~~~~pd~Vi   56 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS------------------------DLDLTDPEAVAKLLEAFKPDVVI   56 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT------------------------CS-TTSHHHHHHHHHHH--SEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch------------------------hcCCCCHHHHHHHHHHhCCCeEe
Confidence            689999999999999999999999999988642                        57999999999999887899999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (267)
                      |+||...+...+.+++..+..|+.++.++.+.+.+.+ .++|++||..+|+.....+++|+++..|.+.||.+|...|..
T Consensus        57 n~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~-~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~  135 (286)
T PF04321_consen   57 NCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERG-ARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQA  135 (286)
T ss_dssp             E------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHH
T ss_pred             ccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC-CcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHH
Confidence            9999877666778899999999999999999999877 499999999999877778899999999999999999999999


Q ss_pred             HHHhhhcCCCcEEEEeccccccccceeecC
Q 024488          231 ILDFSKNSDMAVMILRLVVFFTLVAFVIKI  260 (267)
Q Consensus       231 ~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp  260 (267)
                      ++..    .-+..++|++       .+||+
T Consensus       136 v~~~----~~~~~IlR~~-------~~~g~  154 (286)
T PF04321_consen  136 VRAA----CPNALILRTS-------WVYGP  154 (286)
T ss_dssp             HHHH-----SSEEEEEE--------SEESS
T ss_pred             HHHh----cCCEEEEecc-------eeccc
Confidence            9984    2389999999       66666

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR02415 23BDH acetoin reductases

Probab=99.90  E-value=1.7e-22  Score=170.98  Aligned_cols=170  Identities=21%  Similarity=0.231  Sum_probs=128.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+++||||+|+||++++++|+++|++|++++|+..   ...+..+++...+.++.++.+|++|++++.++++.     ++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~   77 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEE---TAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGG   77 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999987532   22223333323345788999999999999888764     57


Q ss_pred             CCEEEEccccCCcCCCcc----ChHHHHHHhHHHHH----HHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTL----DPLKYYHNITSNTL----VVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~----~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      +|+||||||.....+..+    ..+..++.|+.++.    .+++.|.+.+ .++||++||.+...           +.+.
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  146 (254)
T TIGR02415        78 FDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHE-----------GNPI  146 (254)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcC-----------CCCC
Confidence            899999999854433222    22345666766644    4566666654 47999999966542           3445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.+|++.+.+++.++.+   .++++++++||.+.+..
T Consensus       147 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~  187 (254)
T TIGR02415       147 LSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPM  187 (254)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChh
Confidence            789999999999999999887   47999999999887754

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.3e-22  Score=168.15  Aligned_cols=158  Identities=18%  Similarity=0.168  Sum_probs=124.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----CCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NAF  146 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~~  146 (267)
                      |+++||||+|+||++++++|+++|++|++++|.....         .     ..+++.+|++|.++++++++.    .++
T Consensus         4 k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~   69 (234)
T PRK07577          4 RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---------F-----PGELFACDLADIEQTAATLAQINEIHPV   69 (234)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc---------c-----CceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence            8999999999999999999999999999999754320         0     124688999999998887764    468


Q ss_pred             CEEEEccccCCcCCCc----cChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCC
Q 024488          147 DAVMHFAAVAYVGEST----LDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~  218 (267)
                      |+||||||.....+..    +..+..++.|+.+    ++.+++.|.+.+.++||++||.+.|+            .+...
T Consensus        70 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------~~~~~  137 (234)
T PRK07577         70 DAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFG------------ALDRT  137 (234)
T ss_pred             cEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccC------------CCCch
Confidence            9999999986544322    2233445566666    44567778777788999999987764            23467


Q ss_pred             hHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          219 PYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       219 ~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .|+.+|++.+.++++++.+   .|+++++++||.+.+..
T Consensus       138 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~  176 (234)
T PRK07577        138 SYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETEL  176 (234)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcc
Confidence            8999999999999999887   58999999999888754

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.90  E-value=3.2e-22  Score=168.31  Aligned_cols=168  Identities=17%  Similarity=0.113  Sum_probs=126.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +++++||||+|+||++++++|+++|+.|++.+|+.   +.+.+...+.   +.++.++.+|++|.+++++++++     +
T Consensus         6 ~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~---~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T PRK12936          6 GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRV---EKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEADLE   79 (245)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH---HHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999998877532   2232222222   34688899999999999988764     5


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||........    ++.++.++.|+.+...    +++.+.+++.++||++||.+.+.           +.+.
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  148 (245)
T PRK12936         80 GVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVT-----------GNPG  148 (245)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCc-----------CCCC
Confidence            799999999986443322    2334456667776544    44455556678999999965542           2334


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.+|++.+.+++.++++   .++++++++||++.+..
T Consensus       149 ~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~  189 (245)
T PRK12936        149 QANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAM  189 (245)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCch
Confidence            678999999999999999887   58999999999887744

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.90  E-value=1.3e-22  Score=170.37  Aligned_cols=169  Identities=18%  Similarity=0.143  Sum_probs=127.2

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CCCC
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NAFD  147 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~~D  147 (267)
                      ++||||+||||.+++++|+++|++|+++++..  .+...+..+++...+.++.++++|++|.+++++++++     +++|
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~   78 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSG--RSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYY   78 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            58999999999999999999999999988632  2223333333333345789999999999999888765     6789


Q ss_pred             EEEEccccCCcCC----CccChHHHHHHhHHHHHHHHHH-----HHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCC
Q 024488          148 AVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLES-----MARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (267)
Q Consensus       148 ~li~~Ag~~~~~~----~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~  218 (267)
                      ++|||||......    ..++.+..++.|+.++..++..     +.+.+.++||++||.+.+.           +.+...
T Consensus        79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~~~~  147 (239)
T TIGR01831        79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVM-----------GNRGQV  147 (239)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhcc-----------CCCCCc
Confidence            9999999754332    2234455667777776655443     3445567999999966542           344567


Q ss_pred             hHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          219 PYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       219 ~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .|+.+|++.+.++++++.|   .|++++.++||.+.|..
T Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  186 (239)
T TIGR01831       148 NYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEM  186 (239)
T ss_pred             chHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCcccc
Confidence            8999999999999999987   58999999999877754

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.90  E-value=1.9e-22  Score=174.80  Aligned_cols=172  Identities=12%  Similarity=-0.061  Sum_probs=119.3

Q ss_pred             CcEEEEEcC--CChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhc-----C--CCC---CceEEEEccC--CC--
Q 024488           70 VTHVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQEL-----F--PEP---GRLQFIYADL--GD--  133 (267)
Q Consensus        70 ~k~vlVTGa--sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~--~~~---~~~~~~~~Dl--~d--  133 (267)
                      +|++|||||  |+|||+++|+.|+++|++|++ +|.....+.....+++.     .  ..+   .....+.+|+  ++  
T Consensus         9 gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   87 (303)
T PLN02730          9 GKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPE   87 (303)
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccc
Confidence            499999999  899999999999999999998 55433332222222110     0  001   1245788898  33  


Q ss_pred             ----------------HHHHHHHhhc-----CCCCEEEEccccCC--cCCCccC----hHHHHHHhHHH----HHHHHHH
Q 024488          134 ----------------AKAVNKFFSE-----NAFDAVMHFAAVAY--VGESTLD----PLKYYHNITSN----TLVVLES  182 (267)
Q Consensus       134 ----------------~~~v~~~~~~-----~~~D~li~~Ag~~~--~~~~~~~----~~~~~~~~~~~----~~~~l~~  182 (267)
                                      ++++++++++     +++|+||||||...  ..+..+.    .+..++.|+.+    ++.++|.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~  167 (303)
T PLN02730         88 DVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPI  167 (303)
T ss_pred             cCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                            3377777765     68999999997532  1232322    23344556555    5567788


Q ss_pred             HHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHhhhc----CCCcEEEEeccccccccc
Q 024488          183 MARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSKN----SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       183 ~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~-~~Y~~sK~a~e~l~~~~a~e----~g~~~~~vrp~~v~~~~~  255 (267)
                      |.+.  ++||++||.+..-           +.+.. ..|++||++++.|++.++.|    .|++++.|.||+|.|.+.
T Consensus       168 m~~~--G~II~isS~a~~~-----------~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~  232 (303)
T PLN02730        168 MNPG--GASISLTYIASER-----------IIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAA  232 (303)
T ss_pred             HhcC--CEEEEEechhhcC-----------CCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchh
Confidence            8653  7999999976641           23333 47999999999999999987    369999999999998653

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.5e-22  Score=168.08  Aligned_cols=168  Identities=19%  Similarity=0.178  Sum_probs=126.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+|+||++++++|+++|++|++++|+....   .+.++++..  ..+.++.+|++|.++++++++.     +
T Consensus         7 ~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (239)
T PRK12828          7 GKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPL---SQTLPGVPA--DALRIGGIDLVDPQAARRAVDEVNRQFG   81 (239)
T ss_pred             CCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhH---HHHHHHHhh--cCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            38999999999999999999999999999999754322   222222221  2467788999999999888875     5


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHHH----HHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~~----l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+|||+||.........    ..++.+..|..++..+    ++.+.+.+.++||++||...++           +.++
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  150 (239)
T PRK12828         82 RLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALK-----------AGPG  150 (239)
T ss_pred             CcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhcc-----------CCCC
Confidence            7999999999754332222    2233455666665554    4445566778999999988774           3445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      ...|+.+|.+.+.+++.++.+   .++++++++||.|++.
T Consensus       151 ~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~  190 (239)
T PRK12828        151 MGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTP  190 (239)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCc
Confidence            778999999999999998876   5899999999966654

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.90  E-value=4.6e-23  Score=170.25  Aligned_cols=172  Identities=27%  Similarity=0.427  Sum_probs=143.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      ++|+||||+||||+||+..|..+|+.|+++|..-.....   .++.... ...++.+.-|+..+     ++.  .+|-|+
T Consensus        28 lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~---n~~~~~~-~~~fel~~hdv~~p-----l~~--evD~Iy   96 (350)
T KOG1429|consen   28 LRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKE---NLEHWIG-HPNFELIRHDVVEP-----LLK--EVDQIY   96 (350)
T ss_pred             cEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchh---hcchhcc-CcceeEEEeechhH-----HHH--Hhhhhh
Confidence            899999999999999999999999999999964433222   2222211 34677777777655     555  689999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCC-----CCCCCChHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET-----PQAPINPYGKAKK  225 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~-----~~~~~~~Y~~sK~  225 (267)
                      |+|+.+.+..+..++...+..|..++.+.+-.+++-+ +|+++.||+.+||++...|..|+.     |..+.+.|...|.
T Consensus        97 hLAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr  175 (350)
T KOG1429|consen   97 HLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKR  175 (350)
T ss_pred             hhccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHH
Confidence            9999998888888999999999999999999887766 799999999999987666665553     5567889999999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEeccccccccceeecCC
Q 024488          226 MAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKIN  261 (267)
Q Consensus       226 a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~  261 (267)
                      ++|.|+.+|.++.|+.+.+.|++       |+|||.
T Consensus       176 ~aE~L~~~y~k~~giE~rIaRif-------NtyGPr  204 (350)
T KOG1429|consen  176 VAETLCYAYHKQEGIEVRIARIF-------NTYGPR  204 (350)
T ss_pred             HHHHHHHHhhcccCcEEEEEeee-------cccCCc
Confidence            99999999999999999999999       999996

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.3e-22  Score=172.35  Aligned_cols=170  Identities=18%  Similarity=0.160  Sum_probs=125.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCC-ceEEEEccCCCHHHHHHHhhc-----C
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      |+++||||+||||++++++|+++|++|++++|+..   ...+..+++...+. ...++.+|++|++++++++++     +
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDAD---GLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHG   77 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            57999999999999999999999999999986543   22222233222222 345678999999999887765     5


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHH----HHHHHHHc-CCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLV----VLESMARH-GVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~----~l~~~~~~-~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||........+    +.+..++.|+.+...    +++.|.+. ..++||++||...+.           +.+
T Consensus        78 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~-----------~~~  146 (272)
T PRK07832         78 SMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLV-----------ALP  146 (272)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccC-----------CCC
Confidence            7999999999754333222    334456677776544    45555554 357999999976542           344


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ....|+.+|++.+.+++.++.|   +++++++++||.+.+..
T Consensus       147 ~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~  188 (272)
T PRK07832        147 WHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPL  188 (272)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence            5678999999999999999876   68999999999887744

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.90  E-value=4.8e-23  Score=161.45  Aligned_cols=171  Identities=18%  Similarity=0.092  Sum_probs=129.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |.++||||++|||+++++.|++.|++|.+.++..   ..+++....+... ..-..+.||+++.++++..+++     +.
T Consensus        15 k~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~---~~A~ata~~L~g~-~~h~aF~~DVS~a~~v~~~l~e~~k~~g~   90 (256)
T KOG1200|consen   15 KVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDS---AAAEATAGDLGGY-GDHSAFSCDVSKAHDVQNTLEEMEKSLGT   90 (256)
T ss_pred             ceeEEecCCchHHHHHHHHHHhcCcEEEEeecch---hhHHHHHhhcCCC-CccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence            8999999999999999999999999999999533   3444444555332 3556789999999999887776     78


Q ss_pred             CCEEEEccccCCcCCCcc----ChHHHHHHhHHH----HHHHHHHHH--HcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTL----DPLKYYHNITSN----TLVVLESMA--RHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~----~~~~l~~~~--~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +++||||||+........    +.+..+..|..+    ++.+...|.  ++++.+||++||.-..           ....
T Consensus        91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGk-----------iGN~  159 (256)
T KOG1200|consen   91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGK-----------IGNF  159 (256)
T ss_pred             CcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcc-----------cccc
Confidence            999999999986654333    333444455555    444555533  2344599999995543           1234


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccce
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVAF  256 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~~  256 (267)
                      ..+.|++||.....|+++.++|   .+++++.+.||+|.+...-
T Consensus       160 GQtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~  203 (256)
T KOG1200|consen  160 GQTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTE  203 (256)
T ss_pred             cchhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhh
Confidence            5789999999999999999998   6899999999988875443

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.8e-22  Score=170.40  Aligned_cols=172  Identities=17%  Similarity=0.167  Sum_probs=126.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+++||||+||||++++++|+++|++|++++|+...  ...+...++...+.++.++.+|++|.++++++++.     ++
T Consensus         7 k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~--~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (248)
T PRK07806          7 KTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAP--RANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG   84 (248)
T ss_pred             cEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchH--hHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            899999999999999999999999999998874321  12222222222244678899999999999888764     57


Q ss_pred             CCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHH
Q 024488          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKA  223 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~s  223 (267)
                      +|+||||||....  ....+...++.|..++.+++..+.+.  ..++||++||........      ..+.+....|+.|
T Consensus        85 ~d~vi~~ag~~~~--~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~------~~~~~~~~~Y~~s  156 (248)
T PRK07806         85 LDALVLNASGGME--SGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT------VKTMPEYEPVARS  156 (248)
T ss_pred             CcEEEECCCCCCC--CCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc------ccCCccccHHHHH
Confidence            9999999986432  12234556778888888877777653  246999999954431110      0122336789999


Q ss_pred             HHHHHHHHHHhhhc---CCCcEEEEecccccc
Q 024488          224 KKMAEDIILDFSKN---SDMAVMILRLVVFFT  252 (267)
Q Consensus       224 K~a~e~l~~~~a~e---~g~~~~~vrp~~v~~  252 (267)
                      |+++|.+++.++.+   .++++++++|+.+.+
T Consensus       157 K~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~  188 (248)
T PRK07806        157 KRAGEDALRALRPELAEKGIGFVVVSGDMIEG  188 (248)
T ss_pred             HHHHHHHHHHHHHHhhccCeEEEEeCCccccC
Confidence            99999999999876   689999999996665

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.90  E-value=2e-22  Score=169.79  Aligned_cols=152  Identities=23%  Similarity=0.306  Sum_probs=138.5

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEEc
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHF  152 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li~~  152 (267)
                      +||||++|.+|.+|++.|. .+++|+.+++.                        .+|++|++.+.+++++.++|+|||+
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~------------------------~~Ditd~~~v~~~i~~~~PDvVIn~   57 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRA------------------------ELDITDPDAVLEVIRETRPDVVINA   57 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCc------------------------cccccChHHHHHHHHhhCCCEEEEC
Confidence            9999999999999999999 77999988741                        1899999999999999899999999


Q ss_pred             cccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 024488          153 AAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIIL  232 (267)
Q Consensus       153 Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~  232 (267)
                      |+.......+..++..|..|..+..++..++.+.+ .++|++||-.+|+...+.++.|+++..|.+.||.||.+.|..++
T Consensus        58 AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g-a~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~  136 (281)
T COG1091          58 AAYTAVDKAESEPELAFAVNATGAENLARAAAEVG-ARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVR  136 (281)
T ss_pred             ccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC-CeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHH
Confidence            99998888888999999999999999999999887 48999999999987778899999999999999999999999999


Q ss_pred             HhhhcCCCcEEEEecccccccc
Q 024488          233 DFSKNSDMAVMILRLVVFFTLV  254 (267)
Q Consensus       233 ~~a~e~g~~~~~vrp~~v~~~~  254 (267)
                      +    .+.+..++|.+|||+..
T Consensus       137 ~----~~~~~~I~Rtswv~g~~  154 (281)
T COG1091         137 A----AGPRHLILRTSWVYGEY  154 (281)
T ss_pred             H----hCCCEEEEEeeeeecCC
Confidence            9    55788999999666543

>PRK08264 short chain dehydrogenase; Validated

Probab=99.90  E-value=4.3e-22  Score=167.07  Aligned_cols=163  Identities=14%  Similarity=0.058  Sum_probs=126.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (267)
                      ++++||||+|+||++++++|+++|+ +|++++|+....   .+       .+.++.++.+|++|.++++++++. +++|+
T Consensus         7 ~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~---~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~~id~   76 (238)
T PRK08264          7 KVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESV---TD-------LGPRVVPLQLDVTDPASVAAAAEAASDVTI   76 (238)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhh---hh-------cCCceEEEEecCCCHHHHHHHHHhcCCCCE
Confidence            8999999999999999999999999 999999754321   11       234788999999999999998876 46899


Q ss_pred             EEEcccc-CCcCCCc----cChHHHHHHhHHHHHHHHH----HHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCCh
Q 024488          149 VMHFAAV-AYVGEST----LDPLKYYHNITSNTLVVLE----SMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (267)
Q Consensus       149 li~~Ag~-~~~~~~~----~~~~~~~~~~~~~~~~~l~----~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~  219 (267)
                      |||+||. .......    +...+.++.|..+...++.    .+.+.+.++||++||...+.           +..+...
T Consensus        77 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~-----------~~~~~~~  145 (238)
T PRK08264         77 LVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWV-----------NFPNLGT  145 (238)
T ss_pred             EEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcc-----------CCCCchH
Confidence            9999998 3322222    2333445666666555444    45556678999999987763           4455788


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          220 YGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       220 Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      |+.+|++.+.+++.++.+   .++++++++||.+.+..
T Consensus       146 y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~  183 (238)
T PRK08264        146 YSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDM  183 (238)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence            999999999999999887   48999999999776654

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.2e-22  Score=172.82  Aligned_cols=176  Identities=16%  Similarity=0.144  Sum_probs=125.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----CCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NAF  146 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~~  146 (267)
                      |+++|||| ||||++++++|+ +|++|++++|+..   .+.+..+++...+.++.++++|++|.++++++++.    +++
T Consensus         3 k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~i   77 (275)
T PRK06940          3 EVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEE---NLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPV   77 (275)
T ss_pred             CEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHH---HHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCC
Confidence            78999998 699999999996 8999999997543   23333333322345788899999999999988875    689


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCC-----C---CCCCCC----C
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPE-----K---MPITEE----T  212 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~-----~---~~~~e~----~  212 (267)
                      |+||||||+..   .....+..++.|+.++..+++.+.+.  ..+++|++||.+......     .   ..++..    .
T Consensus        78 d~li~nAG~~~---~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (275)
T PRK06940         78 TGLVHTAGVSP---SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSL  154 (275)
T ss_pred             CEEEECCCcCC---chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccc
Confidence            99999999752   23456778888988866655544332  235678888866542110     0   000000    0


Q ss_pred             C-------CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          213 P-------QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       213 ~-------~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +       ..+...|+.||++.+.+++.++.|   .|++++.|+||+|.|..
T Consensus       155 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~  206 (275)
T PRK06940        155 PFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPL  206 (275)
T ss_pred             ccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCcc
Confidence            0       124678999999999999999887   58999999999998864

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.90  E-value=9.3e-23  Score=161.88  Aligned_cols=155  Identities=18%  Similarity=0.264  Sum_probs=120.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      |+|+||||++|||++++++|+++|. +|++++|+ .+.+...+...++...+.++.++++|+++.++++++++.     +
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~-~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRS-EDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFG   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESS-CHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeec-ccccccccccccccccccccccccccccccccccccccccccccc
Confidence            6899999999999999999999954 77777764 123334444444444457899999999999999998887     6


Q ss_pred             CCCEEEEccccCCcCCCccChHH----HHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChH
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (267)
                      .+|+||||||........+.+.+    .++.|+.+...+...+..++.++||++||.+..           .+.+....|
T Consensus        80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~-----------~~~~~~~~Y  148 (167)
T PF00106_consen   80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGV-----------RGSPGMSAY  148 (167)
T ss_dssp             SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGT-----------SSSTTBHHH
T ss_pred             cccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhc-----------cCCCCChhH
Confidence            89999999999775554444444    445555555556666555667899999998776           356678899


Q ss_pred             HHHHHHHHHHHHHhhhc
Q 024488          221 GKAKKMAEDIILDFSKN  237 (267)
Q Consensus       221 ~~sK~a~e~l~~~~a~e  237 (267)
                      +++|++.++|+++++.|
T Consensus       149 ~askaal~~~~~~la~e  165 (167)
T PF00106_consen  149 SASKAALRGLTQSLAAE  165 (167)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            99999999999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.90  E-value=5.1e-22  Score=166.83  Aligned_cols=169  Identities=20%  Similarity=0.175  Sum_probs=126.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+|+||++++++|+++|++|++++|+....   .+...+....+.++.++.+|++|++++.++++.     +
T Consensus         5 ~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK05653          5 GKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAA---EALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG   81 (246)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHH---HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            38999999999999999999999999999999754332   222232322355788999999999999888775     5


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      .+|+|||+||........+    ..++.++.|+.+..+    +++.+.+.+.++||++||.....           +..+
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~-----------~~~~  150 (246)
T PRK05653         82 ALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVT-----------GNPG  150 (246)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc-----------CCCC
Confidence            7899999999754433222    223445666666554    44555566778999999976542           3345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFT  252 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~  252 (267)
                      ...|+.+|.+.+.+++.++++   .+++++++|||.+.+
T Consensus       151 ~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~  189 (246)
T PRK05653        151 QTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDT  189 (246)
T ss_pred             CcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCC
Confidence            778999999999999999876   589999999995544

>PLN00015 protochlorophyllide reductase

Probab=99.90  E-value=2.6e-22  Score=175.08  Aligned_cols=175  Identities=13%  Similarity=0.117  Sum_probs=125.6

Q ss_pred             EEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CCCC
Q 024488           74 LVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NAFD  147 (267)
Q Consensus        74 lVTGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~~D  147 (267)
                      +||||++|||++++++|+++| ++|++++|+.   +...+..+++...+..+.++.+|++|.++++++++.     +++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD   77 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDF---LKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLD   77 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCH---HHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCC
Confidence            699999999999999999999 9999998643   333333333322244688899999999999888865     5799


Q ss_pred             EEEEccccCCcC-C----CccChHHHHHHhHHH----HHHHHHHHHHcC--CCEEEEEeccccccCCC-C--C------C
Q 024488          148 AVMHFAAVAYVG-E----STLDPLKYYHNITSN----TLVVLESMARHG--VDTLIYSSTCATYGEPE-K--M------P  207 (267)
Q Consensus       148 ~li~~Ag~~~~~-~----~~~~~~~~~~~~~~~----~~~~l~~~~~~~--~~~iV~vSS~~~~g~~~-~--~------~  207 (267)
                      +||||||+.... .    ..+..+..++.|+.+    ++.++|.|.+.+  .++||++||.+.+-... .  .      .
T Consensus        78 ~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~  157 (308)
T PLN00015         78 VLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGD  157 (308)
T ss_pred             EEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhh
Confidence            999999975321 1    122334566777777    556788887765  58999999976641100 0  0      0


Q ss_pred             -------CC--------CCCCCCCCChHHHHHHHHHHHHHHhhhc----CCCcEEEEeccccc
Q 024488          208 -------IT--------EETPQAPINPYGKAKKMAEDIILDFSKN----SDMAVMILRLVVFF  251 (267)
Q Consensus       208 -------~~--------e~~~~~~~~~Y~~sK~a~e~l~~~~a~e----~g~~~~~vrp~~v~  251 (267)
                             ..        ...+..+...|+.||++.+.+++.++.+    .|+++++++||+|.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~  220 (308)
T PLN00015        158 LRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIA  220 (308)
T ss_pred             hhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCccc
Confidence                   00        0012345678999999988888988876    37999999999884

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=5.3e-22  Score=167.05  Aligned_cols=171  Identities=19%  Similarity=0.159  Sum_probs=128.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEE-ecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      +|+++||||+|+||++++++|+++|++|+++ +|+..   ...+..+.+...+.++.++.+|++|+++++++++.     
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEE---AAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4899999999999999999999999999998 76432   22222222222245688999999999999888765     


Q ss_pred             CCCCEEEEccccCCcCCCcc----ChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +++|+|||+||........+    ..+..++.|+.+.    +.+++.+.+.+.+++|++||...+.           +.+
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~-----------~~~  150 (247)
T PRK05565         82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLI-----------GAS  150 (247)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhcc-----------CCC
Confidence            47999999999864333222    2344556677764    4455666666778999999976653           233


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ....|+.+|++.+.+++.++++   .|++++.++||++.+..
T Consensus       151 ~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~  192 (247)
T PRK05565        151 CEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEM  192 (247)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCcc
Confidence            4678999999999999999887   58999999999887644

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.90  E-value=4.3e-22  Score=173.69  Aligned_cols=170  Identities=25%  Similarity=0.346  Sum_probs=130.5

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc--CCCCEE
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--NAFDAV  149 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--~~~D~l  149 (267)
                      ||||||+|+||++++++|.++|+ +|++++|..+..     .+.+.     ....+..|+.+.+.++.+.+.  .++|+|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-----~~~~~-----~~~~~~~d~~~~~~~~~~~~~~~~~~D~v   70 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-----KFLNL-----ADLVIADYIDKEDFLDRLEKGAFGKIEAI   70 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-----hhhhh-----hheeeeccCcchhHHHHHHhhccCCCCEE
Confidence            68999999999999999999998 788887643211     11111     113466888888888776652  579999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC-CCCCChHHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP-QAPINPYGKAKKMAE  228 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~-~~~~~~Y~~sK~a~e  228 (267)
                      ||+|+....  ...+++..++.|+.++.++++.+.+.+. ++|++||.++|+.... +++|+.+ ..+.+.|+.+|.++|
T Consensus        71 vh~A~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~-~~~e~~~~~~p~~~Y~~sK~~~e  146 (314)
T TIGR02197        71 FHQGACSDT--TETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEA-GFREGRELERPLNVYGYSKFLFD  146 (314)
T ss_pred             EECccccCc--cccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCC-CcccccCcCCCCCHHHHHHHHHH
Confidence            999996432  2345677888999999999999998875 8999999999986543 4555544 347889999999999


Q ss_pred             HHHHHhhh--cCCCcEEEEeccccccccceeecCCCC
Q 024488          229 DIILDFSK--NSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       229 ~l~~~~a~--e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      .+++.+..  ..+++++++||+       ++|||+..
T Consensus       147 ~~~~~~~~~~~~~~~~~~lR~~-------~vyG~~~~  176 (314)
T TIGR02197       147 QYVRRRVLPEALSAQVVGLRYF-------NVYGPREY  176 (314)
T ss_pred             HHHHHHhHhhccCCceEEEEEe-------eccCCCCC
Confidence            99987543  246799999999       99998753

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.89  E-value=2.5e-22  Score=170.57  Aligned_cols=171  Identities=15%  Similarity=0.071  Sum_probs=126.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHh----CCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           72 HVLVTGGAGYIGSHAALRLLK----DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +++||||++|||++++++|++    .|++|++++|+....+.+.+.++.. ..+..+.++.+|++|.++++++++.    
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAE-RSGLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhc-CCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            689999999999999999997    7999999997543333222222221 1234688899999999999888764    


Q ss_pred             -C----CCCEEEEccccCCcC--CC-----ccChHHHHHHhHHH----HHHHHHHHHHcC--CCEEEEEeccccccCCCC
Q 024488          144 -N----AFDAVMHFAAVAYVG--ES-----TLDPLKYYHNITSN----TLVVLESMARHG--VDTLIYSSTCATYGEPEK  205 (267)
Q Consensus       144 -~----~~D~li~~Ag~~~~~--~~-----~~~~~~~~~~~~~~----~~~~l~~~~~~~--~~~iV~vSS~~~~g~~~~  205 (267)
                       +    +.|+||||||.....  ..     .+..++.++.|+.+    ++.++|.|.+.+  .++||++||.+.+.    
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~----  156 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQ----  156 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCC----
Confidence             1    136999999974321  11     12334566777777    455677776552  36899999977652    


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          206 MPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       206 ~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                             +.+....|+.||++.+.+++.++.|   .|++++++.||+|.|..
T Consensus       157 -------~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~  201 (256)
T TIGR01500       157 -------PFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDM  201 (256)
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchH
Confidence                   4556789999999999999999988   57999999999998754

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.9e-22  Score=166.74  Aligned_cols=166  Identities=19%  Similarity=0.175  Sum_probs=125.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (267)
                      +++++||||+|+||+++++.|+++|++|++++|+..   +..+..++.     ...++.+|++|.++++++++. +++|+
T Consensus         9 ~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~---~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~d~   80 (245)
T PRK07060          9 GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAA---ALDRLAGET-----GCEPLRLDVGDDAAIRAALAAAGAFDG   80 (245)
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHh-----CCeEEEecCCCHHHHHHHHHHhCCCCE
Confidence            389999999999999999999999999999996432   222221211     356788999999999998876 57999


Q ss_pred             EEEccccCCcCCCc----cChHHHHHHhHHHHHHHHHHH----HHcC-CCEEEEEeccccccCCCCCCCCCCCCCCCCCh
Q 024488          149 VMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESM----ARHG-VDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (267)
Q Consensus       149 li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~----~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~  219 (267)
                      ||||||........    +..++.+..|+.++..++..+    .+.+ .++||++||.+.+.           +.++...
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~  149 (245)
T PRK07060         81 LVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALV-----------GLPDHLA  149 (245)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcC-----------CCCCCcH
Confidence            99999986443322    233444557777765555544    3333 47999999987763           3445778


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          220 YGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       220 Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      |+.+|.+++.+++.++++   .+++++.++||.+.+..
T Consensus       150 y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~  187 (245)
T PRK07060        150 YCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPM  187 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCch
Confidence            999999999999999987   48999999999776654

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=5.5e-22  Score=167.54  Aligned_cols=168  Identities=16%  Similarity=0.151  Sum_probs=125.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      ++++||||+|+||+++++.|+++|++|++++|+..   +..+..+++...+.++.++.+|+++.++++++++.     ++
T Consensus         6 ~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          6 KVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQE---KLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999986442   22223333322355788899999999998887775     57


Q ss_pred             CCEEEEccccCCcCC-------------CccChHHHHHHhHHHHH----HHHHHHHHc-CCCEEEEEeccccccCCCCCC
Q 024488          146 FDAVMHFAAVAYVGE-------------STLDPLKYYHNITSNTL----VVLESMARH-GVDTLIYSSTCATYGEPEKMP  207 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~-------------~~~~~~~~~~~~~~~~~----~~l~~~~~~-~~~~iV~vSS~~~~g~~~~~~  207 (267)
                      +|+||||||......             ..+.....++.|+.+..    .+++.+.+. ..++||++||.+.++      
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~------  156 (253)
T PRK08217         83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAG------  156 (253)
T ss_pred             CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccC------
Confidence            899999999743211             11222334556666643    456666655 346899999987664      


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          208 ITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       208 ~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                            .++...|+.+|++.+.++++++++   .+++++.++||.|.+.
T Consensus       157 ------~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~  199 (253)
T PRK08217        157 ------NMGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETE  199 (253)
T ss_pred             ------CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCc
Confidence                  335678999999999999999987   6899999999977653

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.5e-22  Score=168.85  Aligned_cols=166  Identities=19%  Similarity=0.175  Sum_probs=123.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+|+||||+||||++++++|+++|++|++++|+..   ...+..+++     ...++++|++|.++++++++.     +
T Consensus         7 ~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~---~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~   78 (255)
T PRK06057          7 GRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPE---AGKAAADEV-----GGLFVPTDVTDEDAVNALFDTAAETYG   78 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHc-----CCcEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999986432   222222222     125789999999999988875     5


Q ss_pred             CCCEEEEccccCCcC--CCcc----ChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccc-cccCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVG--ESTL----DPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCA-TYGEPEKMPITEETP  213 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~--~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~-~~g~~~~~~~~e~~~  213 (267)
                      ++|+||||||...+.  ...+    ..+..++.|+.++    +.+++.|.+++.++||++||.. .++           +
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g-----------~  147 (255)
T PRK06057         79 SVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMG-----------S  147 (255)
T ss_pred             CCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccC-----------C
Confidence            799999999975321  1112    2344556666664    4567777777778999999864 443           1


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..+...|+.+|++.+.+++.++.+   .|+++++++||++.+..
T Consensus       148 ~~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~  191 (255)
T PRK06057        148 ATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPL  191 (255)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCch
Confidence            234668999999999999998876   58999999999776643

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.89  E-value=7.8e-22  Score=167.62  Aligned_cols=171  Identities=17%  Similarity=0.153  Sum_probs=127.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      .|+++||||+|+||++++++|+++|++ |++++|+..+.   .+...++...+.++.++.+|+++++++.++++.     
T Consensus         6 ~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~---~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK06198          6 GKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKG---EAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF   82 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHH---HHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            389999999999999999999999999 99988753322   222222222345688899999999999888765     


Q ss_pred             CCCCEEEEccccCCcCCCccC----hHHHHHHhHHHHHH----HHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~----~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      +++|+||||||........+.    .+..++.|+.+...    +++.|.+.+ .++||++||.+.++           +.
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~-----------~~  151 (260)
T PRK06198         83 GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHG-----------GQ  151 (260)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCccccc-----------CC
Confidence            579999999997643332222    23345666666554    455555543 47899999988774           23


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +....|+.+|.+++.+++.++.+   .+++++.++||++.+..
T Consensus       152 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~  194 (260)
T PRK06198        152 PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEG  194 (260)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcc
Confidence            44678999999999999999987   46999999999777653

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.89  E-value=7e-22  Score=166.02  Aligned_cols=172  Identities=16%  Similarity=0.143  Sum_probs=123.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC--HHHHHHHhhc----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~----  143 (267)
                      +|+++||||+||||++++++|+++|++|++++|+....+...+.+.+.  ....+.++.+|+++  .+++.++++.    
T Consensus         6 ~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          6 DKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEA--GHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHc--CCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            389999999999999999999999999999997654332222222221  12356778899975  4455554432    


Q ss_pred             --CCCCEEEEccccCCc-CCCcc----ChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYV-GESTL----DPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~-~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                        +++|+||||||.... .+..+    +..+.++.|+.+.    +.+++.|.+.+.++||++||....           .
T Consensus        84 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~-----------~  152 (239)
T PRK08703         84 TQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGE-----------T  152 (239)
T ss_pred             hCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccc-----------c
Confidence              478999999997432 22222    2234566777764    445666666667899999996554           2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhcC----CCcEEEEecccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKNS----DMAVMILRLVVFFTLV  254 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e~----g~~~~~vrp~~v~~~~  254 (267)
                      +.+....|+.||++.+.+++.++.|.    ++++++|+||+|.+..
T Consensus       153 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~  198 (239)
T PRK08703        153 PKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQ  198 (239)
T ss_pred             CCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcc
Confidence            44557789999999999999999883    5999999999776653

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.89  E-value=7.7e-22  Score=167.44  Aligned_cols=167  Identities=19%  Similarity=0.126  Sum_probs=123.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+++||||+|+||++++++|+++|++|++++|+..   ...+..+++  .+.++.++++|++|.+++.+++++     ++
T Consensus         3 k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~---~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (257)
T PRK07074          3 RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAA---ALAAFADAL--GDARFVPVACDLTDAASLAAALANAAAERGP   77 (257)
T ss_pred             CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHh--cCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            78999999999999999999999999999996543   222222333  134688899999999999887765     57


Q ss_pred             CCEEEEccccCCcCCCccChHH----HHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|++|||||........+...+    .+..|+.+...    +++.+.+.+.++||++||...+.            ....
T Consensus        78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------------~~~~  145 (257)
T PRK07074         78 VDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA------------ALGH  145 (257)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC------------CCCC
Confidence            9999999998644332222222    23455555444    44555666678999999965542            1124


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..|+.+|++.+.++++++++   +|+++++++||++.+..
T Consensus       146 ~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~  185 (257)
T PRK07074        146 PAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQA  185 (257)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcch
Confidence            57999999999999999987   47999999999776643

>PRK06484 short chain dehydrogenase; Validated

Probab=99.89  E-value=7e-22  Score=184.08  Aligned_cols=168  Identities=17%  Similarity=0.146  Sum_probs=129.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||++|||++++++|+++|++|++++|+.   +++.+..+++   +.++.++.+|++|+++++++++.     +
T Consensus         5 ~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (520)
T PRK06484          5 SRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNV---ERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREFG   78 (520)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHhC
Confidence            38999999999999999999999999999998643   3333333333   34677899999999999998876     6


Q ss_pred             CCCEEEEccccCCc--CCC----ccChHHHHHHhHHH----HHHHHHHHHHcCCC-EEEEEeccccccCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYV--GES----TLDPLKYYHNITSN----TLVVLESMARHGVD-TLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       145 ~~D~li~~Ag~~~~--~~~----~~~~~~~~~~~~~~----~~~~l~~~~~~~~~-~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                      ++|+||||||+..+  .+.    .++.+..++.|+.+    ++.+++.|.+.+.+ +||++||.+...           +
T Consensus        79 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~-----------~  147 (520)
T PRK06484         79 RIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLV-----------A  147 (520)
T ss_pred             CCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCC-----------C
Confidence            89999999997421  121    22234455666666    44567777665544 999999977652           3


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .+....|+++|++++.+++.++.|   .+++++.|+||.|.|..
T Consensus       148 ~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~  191 (520)
T PRK06484        148 LPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQM  191 (520)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchh
Confidence            445779999999999999999998   58999999999888754

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.89  E-value=1.4e-21  Score=164.27  Aligned_cols=171  Identities=18%  Similarity=0.142  Sum_probs=125.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+|+||++++++|+++|++|+++.|+...  ...+...++...+.++.++++|+++.+++.++++.     +
T Consensus         5 ~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (248)
T PRK05557          5 GKVALVTGASRGIGRAIAERLAAQGANVVINYASSEA--GAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG   82 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchh--HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999888864321  12222222222345788899999999999888765     5


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHHHHHHHHH----HHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLES----MARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~~l~~----~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+|||+||........    +..++.++.|+.++..+++.    +.+.+.++||++||.+...           +.+.
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~-----------~~~~  151 (248)
T PRK05557         83 GVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLM-----------GNPG  151 (248)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCc-----------CCCC
Confidence            799999999976543322    22334456677776555544    4455667999999964431           2334


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      ...|+.+|.+.+.+++.++++   .++++++++||++.+.
T Consensus       152 ~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~  191 (248)
T PRK05557        152 QANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETD  191 (248)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCc
Confidence            778999999999999998876   5899999999977653

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=7.3e-22  Score=165.35  Aligned_cols=159  Identities=18%  Similarity=0.203  Sum_probs=120.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~l  149 (267)
                      |+++||||+||||++++++|+++|++|++++|.....            ...++.++.+|++++  ++++++. +++|+|
T Consensus         6 k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------------~~~~~~~~~~D~~~~--~~~~~~~~~~id~l   71 (235)
T PRK06550          6 KTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------------LSGNFHFLQLDLSDD--LEPLFDWVPSVDIL   71 (235)
T ss_pred             CEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------------cCCcEEEEECChHHH--HHHHHHhhCCCCEE
Confidence            8999999999999999999999999999998743211            123578899999987  5555544 589999


Q ss_pred             EEccccCCc-CCC----ccChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChH
Q 024488          150 MHFAAVAYV-GES----TLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (267)
Q Consensus       150 i~~Ag~~~~-~~~----~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (267)
                      |||||.... ...    .++.++.++.|+.++..    +++.+.+.+.++||++||.+.+.           +.+....|
T Consensus        72 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~Y  140 (235)
T PRK06550         72 CNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFV-----------AGGGGAAY  140 (235)
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc-----------CCCCCccc
Confidence            999996421 121    22334556677777544    55556666678999999977652           33456789


Q ss_pred             HHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          221 GKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       221 ~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +.+|++++.+++.++.+   .|+++++++||+|.|..
T Consensus       141 ~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~  177 (235)
T PRK06550        141 TASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPM  177 (235)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcc
Confidence            99999999999999987   48999999999887654

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.9e-22  Score=169.06  Aligned_cols=166  Identities=19%  Similarity=0.181  Sum_probs=122.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      ++++||||+|+||++++++|+++|++|++++|+...   ..+..++..  ..++.++.+|++|++++++++++     ++
T Consensus        12 ~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~---~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (264)
T PRK12829         12 LRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAA---LAATAARLP--GAKVTATVADVADPAQVERVFDTAVERFGG   86 (264)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHh--cCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999999974322   222222221  11568899999999999888765     58


Q ss_pred             CCEEEEccccCCc-CC----CccChHHHHHHhHHHHHHHHHH----HHHcCC-CEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYV-GE----STLDPLKYYHNITSNTLVVLES----MARHGV-DTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       146 ~D~li~~Ag~~~~-~~----~~~~~~~~~~~~~~~~~~~l~~----~~~~~~-~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +|+|||+||.... ..    ..+..++.++.|+.++..++..    +.+.+. ++||++||.+...           +.+
T Consensus        87 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~-----------~~~  155 (264)
T PRK12829         87 LDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRL-----------GYP  155 (264)
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccccc-----------CCC
Confidence            9999999997622 11    2233455677777776655444    444444 6788888865431           334


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFT  252 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~  252 (267)
                      +...|+.+|++.+.+++.++++   .+++++++|||.+++
T Consensus       156 ~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~  195 (264)
T PRK12829        156 GRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRG  195 (264)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCC
Confidence            4678999999999999999887   489999999995544

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.3e-22  Score=165.66  Aligned_cols=166  Identities=21%  Similarity=0.150  Sum_probs=129.5

Q ss_pred             EEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CCCCEEEEc
Q 024488           74 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDAVMHF  152 (267)
Q Consensus        74 lVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~li~~  152 (267)
                      +||||+||||++++++|+++|++|++++|+.   ++..+..+++. .+.+++++.+|++|.++++++++. +++|+||||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~---~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~   76 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSR---DRLAAAARALG-GGAPVRTAALDITDEAAVDAFFAEAGPFDHVVIT   76 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence            6999999999999999999999999999743   22322222221 245688999999999999999986 678999999


Q ss_pred             cccCCcCCCc----cChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 024488          153 AAVAYVGEST----LDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (267)
Q Consensus       153 Ag~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (267)
                      ||.....+..    +..++.++.|+.+...+.......+.++||++||.+.+.           +.++...|+.+|++++
T Consensus        77 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~-----------~~~~~~~Y~~sK~a~~  145 (230)
T PRK07041         77 AADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVR-----------PSASGVLQGAINAALE  145 (230)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcC-----------CCCcchHHHHHHHHHH
Confidence            9986543322    334455677777777777755545568999999988874           4556789999999999


Q ss_pred             HHHHHhhhc-CCCcEEEEecccccccc
Q 024488          229 DIILDFSKN-SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       229 ~l~~~~a~e-~g~~~~~vrp~~v~~~~  254 (267)
                      +++++++.| .+++++.++||++.+..
T Consensus       146 ~~~~~la~e~~~irv~~i~pg~~~t~~  172 (230)
T PRK07041        146 ALARGLALELAPVRVNTVSPGLVDTPL  172 (230)
T ss_pred             HHHHHHHHHhhCceEEEEeecccccHH
Confidence            999999988 46899999999887643

>PRK08324 short chain dehydrogenase; Validated

Probab=99.89  E-value=1.1e-22  Score=194.53  Aligned_cols=166  Identities=22%  Similarity=0.271  Sum_probs=127.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+|+||||+||||++++++|+++|++|++++|+..   ...+..+++... ..+.++.+|++|.++++++++.     +
T Consensus       422 gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~---~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~g  497 (681)
T PRK08324        422 GKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEE---AAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAFG  497 (681)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHH---HHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            489999999999999999999999999999997543   222222333222 4688999999999999888765     5


Q ss_pred             CCCEEEEccccCCcCCCccCh----HHHHHHhHHHHHHH----HHHHHHcCC-CEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVV----LESMARHGV-DTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~~----l~~~~~~~~-~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||........+.+    +..++.|+.++..+    ++.|.+++. ++||++||...+.           +.+
T Consensus       498 ~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~-----------~~~  566 (681)
T PRK08324        498 GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVN-----------PGP  566 (681)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccC-----------CCC
Confidence            899999999986554433333    34456677765555    666666664 8999999976652           344


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVF  250 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v  250 (267)
                      ....|+.+|++.+.+++.++.+   .|+++++++|+.|
T Consensus       567 ~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v  604 (681)
T PRK08324        567 NFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAV  604 (681)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCcee
Confidence            5789999999999999999987   4699999999955

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.6e-22  Score=168.80  Aligned_cols=169  Identities=16%  Similarity=0.122  Sum_probs=125.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      ||+++||||+||||++++++|+++|++|++++|...  +.+.+..++   .+.+++++++|++|.+++++++++     +
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~--~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTEN--KELTKLAEQ---YNSNLTFHSLDLQDVHELETNFNEILSSIQ   75 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCch--HHHHHHHhc---cCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            589999999999999999999999999999997431  222221111   235788999999999999888865     1


Q ss_pred             --CC--CEEEEccccCCc-CCCccChHHH----HHHhHHH----HHHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCC
Q 024488          145 --AF--DAVMHFAAVAYV-GESTLDPLKY----YHNITSN----TLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       145 --~~--D~li~~Ag~~~~-~~~~~~~~~~----~~~~~~~----~~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                        +.  +++|||||...+ .+..+.+.+.    ++.|+.+    ++.+++.|.+.+ .++||++||..++          
T Consensus        76 ~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~----------  145 (251)
T PRK06924         76 EDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAK----------  145 (251)
T ss_pred             cccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhc----------
Confidence              12  289999997533 2222333333    3445544    566778777653 5799999997665          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecccccccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKN-----SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e-----~g~~~~~vrp~~v~~~~  254 (267)
                       .+.++...|+.+|++.+.+++.++.|     .+++++.|+||++.+..
T Consensus       146 -~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~  193 (251)
T PRK06924        146 -NPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNM  193 (251)
T ss_pred             -CCCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHh
Confidence             25566889999999999999999876     47999999999887754

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.8e-21  Score=163.08  Aligned_cols=169  Identities=18%  Similarity=0.132  Sum_probs=126.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      ++++||||+|+||++++++|+++|++|++++|++.   ...+..+++... ..+.++.+|++|.+++.++++.     ++
T Consensus         7 ~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~---~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (237)
T PRK07326          7 KVALITGGSKGIGFAIAEALLAEGYKVAITARDQK---ELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAFGG   82 (237)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHH---HHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999997543   222333333221 4688899999999999888875     47


Q ss_pred             CCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHHHHHHHH---HcCCCEEEEEeccccccCCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLVVLESMA---RHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~---~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~  218 (267)
                      +|+|||+||........+    ..++.++.|+.+...+++.+.   +.+.++||++||.+.+.           +.....
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~~~~~~  151 (237)
T PRK07326         83 LDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTN-----------FFAGGA  151 (237)
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhcc-----------CCCCCc
Confidence            999999999764433222    233456667666555444332   34557999999976653           344567


Q ss_pred             hHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          219 PYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       219 ~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .|+.+|++.+.+++.++.+   .|+++++++||.+.+..
T Consensus       152 ~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~  190 (237)
T PRK07326        152 AYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHF  190 (237)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcc
Confidence            8999999999999998765   68999999999887654

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.89  E-value=8.9e-22  Score=163.98  Aligned_cols=157  Identities=14%  Similarity=0.071  Sum_probs=116.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc--CCCCEE
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--NAFDAV  149 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--~~~D~l  149 (267)
                      +++||||+||||++++++|+++|++|++++|+.   +++.+..++.     ++.++++|++|.++++++++.  .++|+|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~---~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~id~l   73 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARR---DDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFPHHLDTI   73 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHhhcCcEE
Confidence            699999999999999999999999999998643   2222222222     356789999999999998875  369999


Q ss_pred             EEccccCCc---C---CC---ccChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          150 MHFAAVAYV---G---ES---TLDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       150 i~~Ag~~~~---~---~~---~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      |||||....   .   ..   .+..++.++.|+.+.    +.++|.|.+  .++||++||.+.               +.
T Consensus        74 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~---------------~~  136 (223)
T PRK05884         74 VNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPENP---------------PA  136 (223)
T ss_pred             EECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCCC---------------CC
Confidence            999985321   1   11   122334456666664    445565643  479999999541               22


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      ...|++||++.+.+++.++.|   +|++++.|.||++.+.
T Consensus       137 ~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~  176 (223)
T PRK05884        137 GSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQP  176 (223)
T ss_pred             ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCch
Confidence            568999999999999999997   6899999999988764

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.89  E-value=1.5e-21  Score=164.35  Aligned_cols=169  Identities=20%  Similarity=0.155  Sum_probs=132.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc------
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (267)
                      .|.|+|||.-+|.|+.+|++|.++|++|.+-...+...+    .+..... .++...++.|++++++++++.+.      
T Consensus        29 ~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae----~L~~~~~-s~rl~t~~LDVT~~esi~~a~~~V~~~l~  103 (322)
T KOG1610|consen   29 DKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAE----SLRGETK-SPRLRTLQLDVTKPESVKEAAQWVKKHLG  103 (322)
T ss_pred             CcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHH----HHhhhhc-CCcceeEeeccCCHHHHHHHHHHHHHhcc
Confidence            388999999999999999999999999999873332222    2222211 45788889999999999988764      


Q ss_pred             -CCCCEEEEccccCC-cCCCc----cChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAY-VGEST----LDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       144 -~~~D~li~~Ag~~~-~~~~~----~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                       .++-.||||||+.. .++.+    ++....++.|..|    |+.++|.+++.. ||||++||....           .+
T Consensus       104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR-----------~~  171 (322)
T KOG1610|consen  104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGR-----------VA  171 (322)
T ss_pred             cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccC-----------cc
Confidence             56899999999753 33322    3334455677777    666888887776 799999997774           36


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      .+...+|++||+|+|.++.+++.|   +|++|.+|-||.+.|.+.
T Consensus       172 ~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~  216 (322)
T KOG1610|consen  172 LPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLA  216 (322)
T ss_pred             CcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccC
Confidence            677899999999999999999999   899999999997777443

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=9.5e-22  Score=166.01  Aligned_cols=172  Identities=16%  Similarity=0.133  Sum_probs=125.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCC--CHHHHHHHhhc----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG--DAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--d~~~v~~~~~~----  143 (267)
                      +|+++||||+|+||.+++++|+++|++|++++|+....++..+.+++.  ...++.++.+|++  +.++++++++.    
T Consensus        12 ~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   89 (247)
T PRK08945         12 DRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAA--GGPQPAIIPLDLLTATPQNYQQLADTIEEQ   89 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhc--CCCCceEEEecccCCCHHHHHHHHHHHHHH
Confidence            499999999999999999999999999999997543322222222222  1235677788886  67777666554    


Q ss_pred             -CCCCEEEEccccCCcC-C----CccChHHHHHHhHHHHH----HHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYVG-E----STLDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~-~----~~~~~~~~~~~~~~~~~----~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                       +++|+||||||..... +    ..+..++.++.|+.++.    .+++.|.+.+.++||++||.....           +
T Consensus        90 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-----------~  158 (247)
T PRK08945         90 FGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQ-----------G  158 (247)
T ss_pred             hCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcC-----------C
Confidence             5799999999975331 1    22334556777877744    455666677788999999976542           3


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .+....|+.||++.+.+++.++.+   .++++++++||.+.+..
T Consensus       159 ~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~  202 (247)
T PRK08945        159 RANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAM  202 (247)
T ss_pred             CCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcc
Confidence            345678999999999999999887   47899999999876643

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.89  E-value=7e-22  Score=164.63  Aligned_cols=169  Identities=15%  Similarity=0.182  Sum_probs=122.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---CCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~~~  146 (267)
                      ||+|+||||+||||++++++|+++|++|++++|+....+    .+++.    .++.++.+|++|.++++++++.   +++
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~----~~~~~----~~~~~~~~D~~d~~~~~~~~~~~~~~~i   72 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDT----ALQAL----PGVHIEKLDMNDPASLDQLLQRLQGQRF   72 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchH----HHHhc----cccceEEcCCCCHHHHHHHHHHhhcCCC
Confidence            589999999999999999999999999999997654322    12222    2567789999999999888875   479


Q ss_pred             CEEEEccccCCcC--CCcc----ChHHHHHHhHHHHHHH----HHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          147 DAVMHFAAVAYVG--ESTL----DPLKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       147 D~li~~Ag~~~~~--~~~~----~~~~~~~~~~~~~~~~----l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      |+||||||.....  +..+    +....+..|+.++..+    ++.+.+ +.++++++||......        ..+..+
T Consensus        73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~ss~~g~~~--------~~~~~~  143 (225)
T PRK08177         73 DLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRP-GQGVLAFMSSQLGSVE--------LPDGGE  143 (225)
T ss_pred             CEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhh-cCCEEEEEccCccccc--------cCCCCC
Confidence            9999999985331  1122    2223344555555444    444433 3468999988543311        112334


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ...|+.+|++.+.+++.++.|   .+++++.++||++.|...
T Consensus       144 ~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~  185 (225)
T PRK08177        144 MPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMG  185 (225)
T ss_pred             ccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCC
Confidence            668999999999999999887   579999999998888653

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.88  E-value=1.5e-21  Score=173.16  Aligned_cols=180  Identities=20%  Similarity=0.232  Sum_probs=131.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCc---chhhhhhhcCC---C-C-CceEEEEccCCCH------H
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNI---GAVKVLQELFP---E-P-GRLQFIYADLGDA------K  135 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~---~~~~~~~~~~~---~-~-~~~~~~~~Dl~d~------~  135 (267)
                      +|+||||||+||++++++|+++|  ++|+++.|......   ++.+.++....   . . .+++++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999999  67999997543221   11111111100   0 1 4788999999753      4


Q ss_pred             HHHHHhhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC--
Q 024488          136 AVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP--  213 (267)
Q Consensus       136 ~v~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~--  213 (267)
                      ++..+.+  ++|+|||||+....   ....+...+.|+.++.++++.+.+.+.++||++||.++|+.....+..|+.+  
T Consensus        81 ~~~~~~~--~~d~vih~a~~~~~---~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~  155 (367)
T TIGR01746        81 EWERLAE--NVDTIVHNGALVNW---VYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIV  155 (367)
T ss_pred             HHHHHHh--hCCEEEeCCcEecc---CCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCcccccccc
Confidence            5666655  79999999997532   2234566778999999999999988888899999999997543332333322  


Q ss_pred             ---CCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          214 ---QAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       214 ---~~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                         ..+.+.|+.||.++|.+++.+++. |++++++|||       ++|||...+
T Consensus       156 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg-------~v~G~~~~g  201 (367)
T TIGR01746       156 TPPPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPG-------RILGNSYTG  201 (367)
T ss_pred             ccccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCC-------ceeecCCCC
Confidence               123568999999999999988764 9999999999       888874443

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02996 fatty acyl-CoA reductase

Probab=99.88  E-value=2.8e-21  Score=178.10  Aligned_cols=181  Identities=18%  Similarity=0.237  Sum_probs=132.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC---CeEEEEecCCCCCcchhhhhhhcC-------------CC-----CCceEEEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS---YRVTIVDNLSRGNIGAVKVLQELF-------------PE-----PGRLQFIY  128 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~-------------~~-----~~~~~~~~  128 (267)
                      +|+|+|||||||||++++++|++.+   .+|+++.|.........+...++.             ..     ..+++++.
T Consensus        11 ~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~   90 (491)
T PLN02996         11 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVP   90 (491)
T ss_pred             CCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEe
Confidence            3999999999999999999999865   367888876543322211100110             00     14789999


Q ss_pred             ccCC-------CHHHHHHHhhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEEeccccc
Q 024488          129 ADLG-------DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATY  200 (267)
Q Consensus       129 ~Dl~-------d~~~v~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~iV~vSS~~~~  200 (267)
                      +|++       +.+.++.+++  ++|+|||+|+....   ...++..++.|+.++.++++++.+. +.+++|++||.++|
T Consensus        91 GDl~~~~LGLs~~~~~~~l~~--~vD~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vy  165 (491)
T PLN02996         91 GDISYDDLGVKDSNLREEMWK--EIDIVVNLAATTNF---DERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVC  165 (491)
T ss_pred             cccCCcCCCCChHHHHHHHHh--CCCEEEECccccCC---cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEe
Confidence            9998       4555677777  79999999997643   3467788899999999999999885 57899999999999


Q ss_pred             cCCCC----CCCCCCC-----------------------------------------------CCCCCChHHHHHHHHHH
Q 024488          201 GEPEK----MPITEET-----------------------------------------------PQAPINPYGKAKKMAED  229 (267)
Q Consensus       201 g~~~~----~~~~e~~-----------------------------------------------~~~~~~~Y~~sK~a~e~  229 (267)
                      |...+    .++++..                                               .....+.|+.||+++|.
T Consensus       166 G~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~  245 (491)
T PLN02996        166 GEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEM  245 (491)
T ss_pred             cCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHH
Confidence            86431    1111000                                               11234679999999999


Q ss_pred             HHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          230 IILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       230 l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      +++.++  .+++++++||+       ++|||+..+
T Consensus       246 lv~~~~--~~lpv~i~RP~-------~V~G~~~~p  271 (491)
T PLN02996        246 LLGNFK--ENLPLVIIRPT-------MITSTYKEP  271 (491)
T ss_pred             HHHHhc--CCCCEEEECCC-------EeccCCcCC
Confidence            999876  38999999999       888886543

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.88  E-value=1.2e-21  Score=155.65  Aligned_cols=165  Identities=15%  Similarity=0.063  Sum_probs=128.2

Q ss_pred             cEEEEEcCC-ChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc------
Q 024488           71 THVLVTGGA-GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (267)
Q Consensus        71 k~vlVTGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (267)
                      |+|+|||+| ||||.+++++|+++||.|+++.|+..   ...+...+     .++..++.|+++++++..+..+      
T Consensus         8 k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e---~M~~L~~~-----~gl~~~kLDV~~~~~V~~v~~evr~~~~   79 (289)
T KOG1209|consen    8 KKVLITGCSSGGIGYALAKEFARNGYLVYATARRLE---PMAQLAIQ-----FGLKPYKLDVSKPEEVVTVSGEVRANPD   79 (289)
T ss_pred             CeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccc---hHhhHHHh-----hCCeeEEeccCChHHHHHHHHHHhhCCC
Confidence            889999876 89999999999999999999996433   22222111     2577899999999998876654      


Q ss_pred             CCCCEEEEccccCCcCCCcc----ChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +.+|+||||||.....+..+    ..++.++.|+.|    ++.+...+.+. .|.||++.|..+|           .|.+
T Consensus        80 Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika-KGtIVnvgSl~~~-----------vpfp  147 (289)
T KOG1209|consen   80 GKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA-KGTIVNVGSLAGV-----------VPFP  147 (289)
T ss_pred             CceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc-cceEEEecceeEE-----------eccc
Confidence            78999999999865444333    335566777766    45555445544 4799999999888           3677


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ..+.|.+||+|...+++.++-|   +|++|+.+-+|=|.|.+.
T Consensus       148 f~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia  190 (289)
T KOG1209|consen  148 FGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIA  190 (289)
T ss_pred             hhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccc
Confidence            7889999999999999999988   799999999997777443

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.88  E-value=2.4e-22  Score=168.96  Aligned_cols=171  Identities=15%  Similarity=0.161  Sum_probs=135.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHH----HHHHhhcCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKA----VNKFFSENAF  146 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~----v~~~~~~~~~  146 (267)
                      +.++|||||.|||++.|++|+++|.+|++++|+..+.+...+++++..  +-++.++.+|.++.+.    +++.+++..+
T Consensus        50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~--~vev~~i~~Dft~~~~~ye~i~~~l~~~~V  127 (312)
T KOG1014|consen   50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKY--KVEVRIIAIDFTKGDEVYEKLLEKLAGLDV  127 (312)
T ss_pred             CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHh--CcEEEEEEEecCCCchhHHHHHHHhcCCce
Confidence            899999999999999999999999999999976655555555555543  3578889999986654    5555555677


Q ss_pred             CEEEEccccCCc--CCCccChHHHHH----HhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          147 DAVMHFAAVAYV--GESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       147 D~li~~Ag~~~~--~~~~~~~~~~~~----~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      -+||||+|....  ....+.+++.++    .|..+    ++.++|.|.+++.|.||++||.+..           .|.+.
T Consensus       128 gILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~-----------~p~p~  196 (312)
T KOG1014|consen  128 GILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL-----------IPTPL  196 (312)
T ss_pred             EEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc-----------ccChh
Confidence            899999998763  223344443332    23332    7779999999999999999997776           37788


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ++.|++||+..+.+.+++++|   +|+.+-.+-|..|-|..
T Consensus       197 ~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm  237 (312)
T KOG1014|consen  197 LSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKM  237 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccc
Confidence            999999999999999999998   58999999999877744

>PRK08017 oxidoreductase; Provisional

Probab=99.88  E-value=1.9e-21  Score=164.74  Aligned_cols=164  Identities=21%  Similarity=0.199  Sum_probs=125.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc------C
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------N  144 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------~  144 (267)
                      |+++||||+|+||+++++.|+++|++|++++|+..+.    +.+.+     .++..+.+|++|.+++.++++.      +
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~----~~~~~-----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   73 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDV----ARMNS-----LGFTGILLDLDDPESVERAADEVIALTDN   73 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHh----HHHHh-----CCCeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            6899999999999999999999999999998754221    11111     1467889999999988776654      4


Q ss_pred             CCCEEEEccccCCcCC----CccChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~----~~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|.+|||||.....+    ..+..++.++.|+.++.+    +++.|.+.+.++||++||.+.+.           +.+.
T Consensus        74 ~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~~~~  142 (256)
T PRK08017         74 RLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLI-----------STPG  142 (256)
T ss_pred             CCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCccccc-----------CCCC
Confidence            6899999999754332    222334556777776544    67888888888999999975542           3445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.+|++.+.++++++.+   .++++++++||.+.+.+
T Consensus       143 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~  183 (256)
T PRK08017        143 RGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRF  183 (256)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccch
Confidence            778999999999999988664   68999999999887743

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.88  E-value=2.9e-22  Score=169.68  Aligned_cols=177  Identities=21%  Similarity=0.267  Sum_probs=111.4

Q ss_pred             EEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCC----------CCCceEEEEccCCCH------HH
Q 024488           75 VTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFP----------EPGRLQFIYADLGDA------KA  136 (267)
Q Consensus        75 VTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dl~d~------~~  136 (267)
                      |||||||||.+++++|++.+.  +|+++.|.........+..+.+..          ...+++++.+|++++      ++
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  999999854332222222122211          146899999999864      56


Q ss_pred             HHHHhhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCC------
Q 024488          137 VNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE------  210 (267)
Q Consensus       137 v~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e------  210 (267)
                      ++.+.+  .+|+|||+|+.....   ...++..+.|+.+++++++.+.+.+.++++|+||..+.+.... .+.|      
T Consensus        81 ~~~L~~--~v~~IiH~Aa~v~~~---~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~-~~~~~~~~~~  154 (249)
T PF07993_consen   81 YQELAE--EVDVIIHCAASVNFN---APYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPG-TIEEKVYPEE  154 (249)
T ss_dssp             HHHHHH--H--EEEE--SS-SBS----S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TT-T--SSS-HHH
T ss_pred             hhcccc--ccceeeecchhhhhc---ccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCC-cccccccccc
Confidence            777766  789999999976433   2345577899999999999999777679999999555443332 1111      


Q ss_pred             ----CCCCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          211 ----ETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       211 ----~~~~~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                          .......+.|..||+.+|.+++.++++.|++++++|||       .++|...+|
T Consensus       155 ~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~-------~i~g~~~~G  205 (249)
T PF07993_consen  155 EDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPG-------IIVGDSRTG  205 (249)
T ss_dssp             --EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE--------EEE-SSSSS
T ss_pred             cccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecC-------cccccCCCc
Confidence                12234456899999999999999998889999999999       777744333

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.88  E-value=2.9e-22  Score=154.44  Aligned_cols=169  Identities=19%  Similarity=0.169  Sum_probs=131.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (267)
                      +++|++||+..|||++++++|++.|++|+.+.|.   .+.+.+..++.   +.-++.+.+|+.+.+.+.+++.. +.+|.
T Consensus         7 G~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~---~a~L~sLV~e~---p~~I~Pi~~Dls~wea~~~~l~~v~pidg   80 (245)
T KOG1207|consen    7 GVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARN---EANLLSLVKET---PSLIIPIVGDLSAWEALFKLLVPVFPIDG   80 (245)
T ss_pred             ceEEEeecccccccHHHHHHHHhcCCEEEEEecC---HHHHHHHHhhC---CcceeeeEecccHHHHHHHhhcccCchhh
Confidence            4999999999999999999999999999999954   44455555443   34578899999998888877765 67899


Q ss_pred             EEEccccCCcCCCccChHHHHHH----hHHH----HHHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCCCCCh
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHN----ITSN----TLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~----~~~~----~~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~  219 (267)
                      +|||||+....++.+-.++.++.    |+.+    ++.+..-+..+. .+.||++||.+..           .+....+.
T Consensus        81 LVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~-----------R~~~nHtv  149 (245)
T KOG1207|consen   81 LVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASI-----------RPLDNHTV  149 (245)
T ss_pred             hhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcc-----------cccCCceE
Confidence            99999998766666555555554    3333    233333344443 5789999997664           36667899


Q ss_pred             HHHHHHHHHHHHHHhhhcC---CCcEEEEeccccccccc
Q 024488          220 YGKAKKMAEDIILDFSKNS---DMAVMILRLVVFFTLVA  255 (267)
Q Consensus       220 Y~~sK~a~e~l~~~~a~e~---g~~~~~vrp~~v~~~~~  255 (267)
                      |+++|+|.++++++++.|.   .+++..+.|.+|+|...
T Consensus       150 YcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG  188 (245)
T KOG1207|consen  150 YCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMG  188 (245)
T ss_pred             EeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEeccc
Confidence            9999999999999999994   58899999999998654

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.87  E-value=5.3e-21  Score=156.37  Aligned_cols=150  Identities=14%  Similarity=0.126  Sum_probs=117.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~l  149 (267)
                      ++++||||+||||++++++|+++ ++|++++|+..                    .+++|++|.++++++++. +++|+|
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~--------------------~~~~D~~~~~~~~~~~~~~~~id~l   59 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG--------------------DVQVDITDPASIRALFEKVGKVDAV   59 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC--------------------ceEecCCChHHHHHHHHhcCCCCEE
Confidence            37999999999999999999999 99999886321                    368999999999999887 689999


Q ss_pred             EEccccCCcCCCccC----hHHHHHHhHHHHHHHH----HHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHH
Q 024488          150 MHFAAVAYVGESTLD----PLKYYHNITSNTLVVL----ESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYG  221 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~~l----~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~  221 (267)
                      |||||........+.    ..+.++.|+.++.++.    |.|.+  .++||++||....           .+.+....|+
T Consensus        60 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~iss~~~~-----------~~~~~~~~Y~  126 (199)
T PRK07578         60 VSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND--GGSFTLTSGILSD-----------EPIPGGASAA  126 (199)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCeEEEEcccccC-----------CCCCCchHHH
Confidence            999997644433222    2334456666655544    44433  4689999986654           2455678999


Q ss_pred             HHHHHHHHHHHHhhhc--CCCcEEEEecccccccc
Q 024488          222 KAKKMAEDIILDFSKN--SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       222 ~sK~a~e~l~~~~a~e--~g~~~~~vrp~~v~~~~  254 (267)
                      .+|++.+.+++.++.|  .|++++.|+||++-+..
T Consensus       127 ~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~  161 (199)
T PRK07578        127 TVNGALEGFVKAAALELPRGIRINVVSPTVLTESL  161 (199)
T ss_pred             HHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCch
Confidence            9999999999999987  58999999999887754

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.87  E-value=8e-21  Score=160.43  Aligned_cols=171  Identities=13%  Similarity=0.137  Sum_probs=114.9

Q ss_pred             CCCCCCCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHh
Q 024488           62 PFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFF  141 (267)
Q Consensus        62 ~~~~~~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~  141 (267)
                      |+.+....+|+++||||+||||++++++|+++|++|++++|+..  +...+    . ... ...++.+|++|.+++.+.+
T Consensus         6 ~~~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~--~~~~~----~-~~~-~~~~~~~D~~~~~~~~~~~   77 (245)
T PRK12367          6 PMAQSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKI--NNSES----N-DES-PNEWIKWECGKEESLDKQL   77 (245)
T ss_pred             hhhHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCch--hhhhh----h-ccC-CCeEEEeeCCCHHHHHHhc
Confidence            33333334499999999999999999999999999999987531  11111    1 111 2256889999999998876


Q ss_pred             hcCCCCEEEEccccCCcCC-CccChHHHHHHhHHHHH----HHHHHHHHc---CCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          142 SENAFDAVMHFAAVAYVGE-STLDPLKYYHNITSNTL----VVLESMARH---GVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       142 ~~~~~D~li~~Ag~~~~~~-~~~~~~~~~~~~~~~~~----~~l~~~~~~---~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                      .  ++|+||||||...... ..++.++.++.|+.+..    .++|.|.++   +.+.++..||.+...           +
T Consensus        78 ~--~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~-----------~  144 (245)
T PRK12367         78 A--SLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ-----------P  144 (245)
T ss_pred             C--CCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC-----------C
Confidence            5  7999999999753322 23445566778887744    456666553   233344445544431           1


Q ss_pred             CCCCChHHHHHHHHHHHH---HHhhhc---CCCcEEEEecccccccc
Q 024488          214 QAPINPYGKAKKMAEDII---LDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~---~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                       +....|++||++.+.+.   +.++.|   .++.+..+.||.+.|.+
T Consensus       145 -~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~  190 (245)
T PRK12367        145 -ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSEL  190 (245)
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCccccc
Confidence             23567999999986544   333323   68899999999877654

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.87  E-value=6.5e-21  Score=159.64  Aligned_cols=169  Identities=20%  Similarity=0.165  Sum_probs=126.5

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CCCC
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NAFD  147 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~~D  147 (267)
                      +||||++|+||++++++|+++|++|++++|+..  +...+..+.+...+.++.++.+|++|.++++++++.     +++|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSE--EGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCch--hHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            589999999999999999999999999987431  222222233323345688999999999999888765     5789


Q ss_pred             EEEEccccCCcCC----CccChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEEeccccccCCCCCCCCCCCCCCCCCh
Q 024488          148 AVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMA----RHGVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (267)
Q Consensus       148 ~li~~Ag~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~  219 (267)
                      +|||+||......    ..+..+..++.|..++..+++.+.    +.+.+++|++||.+.+.           ..+....
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~-----------g~~~~~~  147 (239)
T TIGR01830        79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLM-----------GNAGQAN  147 (239)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccC-----------CCCCCch
Confidence            9999999754322    223445566777777666666554    34567999999965442           2334678


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          220 YGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       220 Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      |+.+|.+.+.+++.++++   .|+++++++||.+.+..
T Consensus       148 y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~  185 (239)
T TIGR01830       148 YAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDM  185 (239)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChh
Confidence            999999999999999876   58999999999776643

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.87  E-value=7.8e-21  Score=158.02  Aligned_cols=167  Identities=18%  Similarity=0.107  Sum_probs=123.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---CCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~~~  146 (267)
                      |++++||||+|+||++++++|+++|++|++++|+....    +.+..     ..++++.+|++|.++++++++.   .++
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~----~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~   71 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAAL----AALQA-----LGAEALALDVADPASVAGLAWKLDGEAL   71 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHH----HHHHh-----ccceEEEecCCCHHHHHHHHHHhcCCCC
Confidence            58999999999999999999999999999999753221    11221     1356889999999999987643   469


Q ss_pred             CEEEEccccCCcC--C----CccChHHHHHHhHHHHHHHHHHHHH---cCCCEEEEEecccc-ccCCCCCCCCCCCCCCC
Q 024488          147 DAVMHFAAVAYVG--E----STLDPLKYYHNITSNTLVVLESMAR---HGVDTLIYSSTCAT-YGEPEKMPITEETPQAP  216 (267)
Q Consensus       147 D~li~~Ag~~~~~--~----~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~iV~vSS~~~-~g~~~~~~~~e~~~~~~  216 (267)
                      |++|||||.....  .    ..++.+..++.|+.++..+++.+.+   ...+++|++||... ++..         +..+
T Consensus        72 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~~~~  142 (222)
T PRK06953         72 DAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA---------TGTT  142 (222)
T ss_pred             CEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc---------cCCC
Confidence            9999999975321  1    2234455677788877776665543   23568999998654 4311         1112


Q ss_pred             CChHHHHHHHHHHHHHHhhhc-CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN-SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e-~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.+|++.+.+++.++.+ .+++++.++||++.+..
T Consensus       143 ~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~  181 (222)
T PRK06953        143 GWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDM  181 (222)
T ss_pred             ccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCC
Confidence            246999999999999999887 48999999999887754

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.87  E-value=1.4e-20  Score=157.57  Aligned_cols=166  Identities=13%  Similarity=0.106  Sum_probs=119.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D  147 (267)
                      |+|+||||+||||++++++|+++|  +.|+...|....         +.  ...++.++++|++|.++++++.+. +++|
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~---------~~--~~~~~~~~~~Dls~~~~~~~~~~~~~~id   69 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP---------DF--QHDNVQWHALDVTDEAEIKQLSEQFTQLD   69 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc---------cc--ccCceEEEEecCCCHHHHHHHHHhcCCCC
Confidence            489999999999999999999985  566655542211         01  134678899999999999887665 6899


Q ss_pred             EEEEccccCCcC------CCccChH----HHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          148 AVMHFAAVAYVG------ESTLDPL----KYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       148 ~li~~Ag~~~~~------~~~~~~~----~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                      +||||||.....      ..++.+.    ..+..|+.+    ++.++|.|.+.+.++|+++||....  .     . ..+
T Consensus        70 ~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~--~-----~-~~~  141 (235)
T PRK09009         70 WLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGS--I-----S-DNR  141 (235)
T ss_pred             EEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccc--c-----c-cCC
Confidence            999999986421      1122222    334455544    5567777777666799999884321  0     0 012


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc-----CCCcEEEEeccccccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKN-----SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e-----~g~~~~~vrp~~v~~~~~  255 (267)
                      .+++..|+.+|++++.+++.++.|     .+++++.+.||++.|...
T Consensus       142 ~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~  188 (235)
T PRK09009        142 LGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALS  188 (235)
T ss_pred             CCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCC
Confidence            345679999999999999999977     378999999998888654

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.6e-20  Score=179.59  Aligned_cols=174  Identities=23%  Similarity=0.266  Sum_probs=131.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHH--hCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH------HHHHHHhh
Q 024488           71 THVLVTGGAGYIGSHAALRLL--KDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA------KAVNKFFS  142 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~v~~~~~  142 (267)
                      |+||||||||+||++++++|+  +.|++|++++|... .....+.....  ...+++++.+|++|+      +.++++ +
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~-~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~   76 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQS-LSRLEALAAYW--GADRVVPLVGDLTEPGLGLSEADIAEL-G   76 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcch-HHHHHHHHHhc--CCCcEEEEecccCCccCCcCHHHHHHh-c
Confidence            479999999999999999999  58999999997432 11221211111  114688999999984      455555 4


Q ss_pred             cCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCC---CCCCCCh
Q 024488          143 ENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET---PQAPINP  219 (267)
Q Consensus       143 ~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~---~~~~~~~  219 (267)
                        ++|+|||+||....   .....+..+.|+.++.++++.+.+.+.+++|++||.++||.... +.+|+.   +..+.+.
T Consensus        77 --~~D~Vih~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~-~~~e~~~~~~~~~~~~  150 (657)
T PRK07201         77 --DIDHVVHLAAIYDL---TADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEG-VFREDDFDEGQGLPTP  150 (657)
T ss_pred             --CCCEEEECceeecC---CCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccC-ccccccchhhcCCCCc
Confidence              89999999997533   23456677899999999999999988899999999999975432 234432   2334578


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          220 YGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       220 Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      |+.||.++|.+++.   ..+++++++||+       ++|||+..+
T Consensus       151 Y~~sK~~~E~~~~~---~~g~~~~ilRp~-------~v~G~~~~g  185 (657)
T PRK07201        151 YHRTKFEAEKLVRE---ECGLPWRVYRPA-------VVVGDSRTG  185 (657)
T ss_pred             hHHHHHHHHHHHHH---cCCCcEEEEcCC-------eeeecCCCC
Confidence            99999999999875   368999999999       888876543

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.86  E-value=2.8e-20  Score=157.28  Aligned_cols=168  Identities=18%  Similarity=0.168  Sum_probs=122.8

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC--CcchhhhhhhcCCCC-CceEEEEccCCC-HHHHHHHhhc-
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG--NIGAVKVLQELFPEP-GRLQFIYADLGD-AKAVNKFFSE-  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~-~~~~~~~~Dl~d-~~~v~~~~~~-  143 (267)
                      .+|+++||||++|||+++|++|+++|++|+++.+....  .+...+...   ... ..+.+..+|+++ .++++.+++. 
T Consensus         4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dvs~~~~~v~~~~~~~   80 (251)
T COG1028           4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK---EAGGGRAAAVAADVSDDEESVEALVAAA   80 (251)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH---hcCCCcEEEEEecCCCCHHHHHHHHHHH
Confidence            35999999999999999999999999999888864332  111222211   111 357788899998 9998888876 


Q ss_pred             ----CCCCEEEEccccCCcC-CCc----cChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCC
Q 024488          144 ----NAFDAVMHFAAVAYVG-EST----LDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       144 ----~~~D~li~~Ag~~~~~-~~~----~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                          +++|++|||||+.... ...    +..+..+..|+.+    ++.+.+.+.++   +||++||.... .        
T Consensus        81 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~--------  148 (251)
T COG1028          81 EEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-G--------  148 (251)
T ss_pred             HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-C--------
Confidence                6799999999986541 322    2334455566655    33455555533   99999997764 2        


Q ss_pred             CCCCCC-CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          211 ETPQAP-INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       211 ~~~~~~-~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                         ..+ ...|+.||++++.+++.++.|   +|++++.|.||.+.|..
T Consensus       149 ---~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~  193 (251)
T COG1028         149 ---GPPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPM  193 (251)
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcc
Confidence               122 589999999999999999977   68999999999776643

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.86  E-value=8.1e-21  Score=164.47  Aligned_cols=172  Identities=9%  Similarity=-0.056  Sum_probs=110.3

Q ss_pred             CcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCC------CCCcchhhhhhhcCCCCC---------------ceEE
Q 024488           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLS------RGNIGAVKVLQELFPEPG---------------RLQF  126 (267)
Q Consensus        70 ~k~vlVTGas--ggIG~~la~~L~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~---------------~~~~  126 (267)
                      +|+++||||+  +|||+++|++|+++|++|++.++.+      +..+............+.               ..+-
T Consensus         8 gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~   87 (299)
T PRK06300          8 GKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPED   87 (299)
T ss_pred             CCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCEE
Confidence            4999999995  9999999999999999999976421      010000000000000000               1122


Q ss_pred             EEccCCC--------HHHHHHHhhc-----CCCCEEEEccccCC--cCCCccCh----HHHHHHhHHH----HHHHHHHH
Q 024488          127 IYADLGD--------AKAVNKFFSE-----NAFDAVMHFAAVAY--VGESTLDP----LKYYHNITSN----TLVVLESM  183 (267)
Q Consensus       127 ~~~Dl~d--------~~~v~~~~~~-----~~~D~li~~Ag~~~--~~~~~~~~----~~~~~~~~~~----~~~~l~~~  183 (267)
                      +.+|+.+        .++++++++.     +++|+||||||...  ..+..+..    +..++.|+.+    ++.++|.|
T Consensus        88 v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m  167 (299)
T PRK06300         88 VPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIM  167 (299)
T ss_pred             eecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence            2222222        1346665554     78999999998643  22322222    3344566655    45577777


Q ss_pred             HHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHhhhc----CCCcEEEEecccccccc
Q 024488          184 ARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN-PYGKAKKMAEDIILDFSKN----SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       184 ~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~-~Y~~sK~a~e~l~~~~a~e----~g~~~~~vrp~~v~~~~  254 (267)
                      .+.  ++||++||....-           +.+... .|++||++++.+++.++.|    +|++++.|.||+|.|..
T Consensus       168 ~~~--G~ii~iss~~~~~-----------~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~  230 (299)
T PRK06300        168 NPG--GSTISLTYLASMR-----------AVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRA  230 (299)
T ss_pred             hcC--CeEEEEeehhhcC-----------cCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChh
Confidence            553  6899999866541           233343 7999999999999999987    38999999999998865

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.86  E-value=2.1e-20  Score=157.08  Aligned_cols=176  Identities=18%  Similarity=0.154  Sum_probs=138.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      .+++|||||.|||..+|.++..+|++|.++.|+.+...++...++-... ...+.+..+|+.|.+++..++++     +.
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~-~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~  112 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQ-VEDVSYKSVDVIDYDSVSKVIEELRDLEGP  112 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhc-cceeeEeccccccHHHHHHHHhhhhhccCC
Confidence            7999999999999999999999999999999766555444444433322 22377999999999999999987     57


Q ss_pred             CCEEEEccccCCcCCCccCh----HHHHHHhHHHHHH----HHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~----~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      +|.+|||||...++..++..    +...++|+.++.+    .++.|++.. .++|+.+||.+..           .+..+
T Consensus       113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~-----------~~i~G  181 (331)
T KOG1210|consen  113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAM-----------LGIYG  181 (331)
T ss_pred             cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhh-----------cCccc
Confidence            99999999998776654443    3455677777655    556666654 5699999997664           25667


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccceeecCCCCCC
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVAFVIKINPTDR  265 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~~~~Gp~~~~~  265 (267)
                      +++|+.+|.|..+|++.+++|   +++.++..-|+       ++-.||-+.+
T Consensus       182 ysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~-------~~~tpGfE~E  226 (331)
T KOG1210|consen  182 YSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPP-------DTLTPGFERE  226 (331)
T ss_pred             ccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCC-------CCCCCccccc
Confidence            999999999999999999999   68999999999       7777765443

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.86  E-value=2.9e-20  Score=147.92  Aligned_cols=167  Identities=16%  Similarity=0.148  Sum_probs=125.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      ++++||||+|+||.+++++|+++|+ .|+++.|+....+.....++++...+.++.++.+|++++++++++++.     +
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999996 678777754433322221233323345788899999999998887764     5


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChH
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (267)
                      ++|+|||+||........    +..+..++.|+.++..+++.+.+.+.+++|++||....-           +......|
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~-----------~~~~~~~y  149 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVL-----------GNPGQANY  149 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhc-----------CCCCchhh
Confidence            689999999975433222    334455778888899999988777778999999965531           23456789


Q ss_pred             HHHHHHHHHHHHHhhhcCCCcEEEEeccc
Q 024488          221 GKAKKMAEDIILDFSKNSDMAVMILRLVV  249 (267)
Q Consensus       221 ~~sK~a~e~l~~~~a~e~g~~~~~vrp~~  249 (267)
                      +.+|.+.+.+++.++. .+++++.+.||.
T Consensus       150 ~~sk~~~~~~~~~~~~-~~~~~~~~~~g~  177 (180)
T smart00822      150 AAANAFLDALAAHRRA-RGLPATSINWGA  177 (180)
T ss_pred             HHHHHHHHHHHHHHHh-cCCceEEEeecc
Confidence            9999999999977664 688899998883

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.9e-20  Score=155.67  Aligned_cols=163  Identities=15%  Similarity=0.109  Sum_probs=122.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (267)
                      ||+++||||+|+||++++++|+++ ++|++++|+..   ...+..++    ...++++++|++|.++++++++. +++|+
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~---~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~id~   74 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAE---RLDELAAE----LPGATPFPVDLTDPEAIAAAVEQLGRLDV   74 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHH---HHHHHHHH----hccceEEecCCCCHHHHHHHHHhcCCCCE
Confidence            489999999999999999999999 99999997532   21111111    12578899999999999998875 46999


Q ss_pred             EEEccccCCcCCCccC----hHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChH
Q 024488          149 VMHFAAVAYVGESTLD----PLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~----~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (267)
                      |||+||..........    ..+.+..|..+    ++.+++.+.+. .+++|++||...++           +.++...|
T Consensus        75 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~-----------~~~~~~~y  142 (227)
T PRK08219         75 LVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLR-----------ANPGWGSY  142 (227)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcC-----------cCCCCchH
Confidence            9999998544332222    22335566665    55666766665 47999999987764           34456789


Q ss_pred             HHHHHHHHHHHHHhhhc-CC-CcEEEEecccccc
Q 024488          221 GKAKKMAEDIILDFSKN-SD-MAVMILRLVVFFT  252 (267)
Q Consensus       221 ~~sK~a~e~l~~~~a~e-~g-~~~~~vrp~~v~~  252 (267)
                      +.+|.+.+.+++.++.+ .+ ++++.++||.+.+
T Consensus       143 ~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~  176 (227)
T PRK08219        143 AASKFALRALADALREEEPGNVRVTSVHPGRTDT  176 (227)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCceEEEEecCCccc
Confidence            99999999999999876 34 8999999996554

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.86  E-value=2.7e-20  Score=170.90  Aligned_cols=172  Identities=16%  Similarity=0.134  Sum_probs=124.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcC----C--CCCceEEEEccCCCHHHHHHHh
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF----P--EPGRLQFIYADLGDAKAVNKFF  141 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~--~~~~~~~~~~Dl~d~~~v~~~~  141 (267)
                      +.+|+|+||||+||||++++++|+++|++|++++|+....+.+.+.+.+..    .  ...++.++.+|++|.+++.+++
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            445899999999999999999999999999999975443322222222110    0  1135889999999999999888


Q ss_pred             hcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHH
Q 024488          142 SENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYG  221 (267)
Q Consensus       142 ~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~  221 (267)
                      .  ++|+||||||....  ...+....++.|+.++.++++++.+.+.++||++||.+++...    ..+ ........|.
T Consensus       158 g--giDiVVn~AG~~~~--~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g----~p~-~~~~sk~~~~  228 (576)
T PLN03209        158 G--NASVVICCIGASEK--EVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVG----FPA-AILNLFWGVL  228 (576)
T ss_pred             c--CCCEEEEccccccc--cccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccC----ccc-cchhhHHHHH
Confidence            6  89999999986532  1123345677888999999999999888999999998764110    000 0112344566


Q ss_pred             HHHHHHHHHHHHhhhcCCCcEEEEecccccc
Q 024488          222 KAKKMAEDIILDFSKNSDMAVMILRLVVFFT  252 (267)
Q Consensus       222 ~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~  252 (267)
                      ..|..+|..+..    .|+++++||||++.+
T Consensus       229 ~~KraaE~~L~~----sGIrvTIVRPG~L~t  255 (576)
T PLN03209        229 CWKRKAEEALIA----SGLPYTIVRPGGMER  255 (576)
T ss_pred             HHHHHHHHHHHH----cCCCEEEEECCeecC
Confidence            777777776654    799999999996653

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=1.8e-20  Score=157.09  Aligned_cols=167  Identities=13%  Similarity=0.103  Sum_probs=120.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      ++|+||||+|+||.++++.|+++|++|++++|+..   ...+..++... ..+++++++|+++.+++++++++     ++
T Consensus         6 ~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (238)
T PRK05786          6 KKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNEN---KLKRMKKTLSK-YGNIHYVVGDVSSTESARNVIEKAAKVLNA   81 (238)
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHh-cCCeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            89999999999999999999999999999997543   22222122211 23678899999999999887765     46


Q ss_pred             CCEEEEccccCCcCCCc--cChHHHHHHhHHHHH----HHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCCh
Q 024488          146 FDAVMHFAAVAYVGEST--LDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~--~~~~~~~~~~~~~~~----~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~  219 (267)
                      +|.+||++|........  +..+..++.|+.+..    .+++.+.+  .++||++||.....          .+.++...
T Consensus        82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~----------~~~~~~~~  149 (238)
T PRK05786         82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIY----------KASPDQLS  149 (238)
T ss_pred             CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcc----------cCCCCchH
Confidence            89999999864322211  222334455555543    34555433  36899999865521          13345678


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          220 YGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       220 Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      |+.+|++.+.+++.++++   .++++++++||+|++.
T Consensus       150 Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~  186 (238)
T PRK05786        150 YAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGD  186 (238)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCC
Confidence            999999999999999987   4899999999977764

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.86  E-value=2.6e-20  Score=167.42  Aligned_cols=163  Identities=22%  Similarity=0.274  Sum_probs=125.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcC--C
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSEN--A  145 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~  145 (267)
                      ..+++|+||||||+||++++++|+++|++|++++|+......... ..+......+++++.+|++|.+++.++++..  +
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~-~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~  136 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNG-KEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP  136 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccch-hhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence            445899999999999999999999999999999975433211000 0111111246889999999999999999853  6


Q ss_pred             CCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHH
Q 024488          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKK  225 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~  225 (267)
                      +|+||||++....     ...+.++.|+.++.++++.+.+.+.++||++||.+++.              +...|..+|.
T Consensus       137 ~D~Vi~~aa~~~~-----~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~--------------p~~~~~~sK~  197 (390)
T PLN02657        137 VDVVVSCLASRTG-----GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK--------------PLLEFQRAKL  197 (390)
T ss_pred             CcEEEECCccCCC-----CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC--------------cchHHHHHHH
Confidence            9999999874321     12345677888999999999999999999999987752              2457899999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEecccccc
Q 024488          226 MAEDIILDFSKNSDMAVMILRLVVFFT  252 (267)
Q Consensus       226 a~e~l~~~~a~e~g~~~~~vrp~~v~~  252 (267)
                      ..|..++.  .+.+++++++||+.++.
T Consensus       198 ~~E~~l~~--~~~gl~~tIlRp~~~~~  222 (390)
T PLN02657        198 KFEAELQA--LDSDFTYSIVRPTAFFK  222 (390)
T ss_pred             HHHHHHHh--ccCCCCEEEEccHHHhc
Confidence            99998766  34799999999996664

>PLN02778 3,5-epimerase/4-reductase

Probab=99.85  E-value=3.9e-20  Score=160.61  Aligned_cols=145  Identities=17%  Similarity=0.191  Sum_probs=110.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||+||||++++++|+++|++|+...                           .|+.|.+.+...++..++|+||
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~---------------------------~~~~~~~~v~~~l~~~~~D~Vi   62 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS---------------------------GRLENRASLEADIDAVKPTHVF   62 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEec---------------------------CccCCHHHHHHHHHhcCCCEEE
Confidence            7899999999999999999999999987421                           2345566666666656799999


Q ss_pred             EccccCCcCC---CccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCC------CCCCCCCCCC-CCCChH
Q 024488          151 HFAAVAYVGE---STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPE------KMPITEETPQ-APINPY  220 (267)
Q Consensus       151 ~~Ag~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~------~~~~~e~~~~-~~~~~Y  220 (267)
                      |+||......   .+.++.+.++.|+.++.++++++.+.+.+ +|++||..+|+...      ..+++|+++. ++.+.|
T Consensus        63 H~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Y  141 (298)
T PLN02778         63 NAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFY  141 (298)
T ss_pred             ECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCch
Confidence            9999864322   44678889999999999999999998875 55667767775322      2246766544 455899


Q ss_pred             HHHHHHHHHHHHHhhhcCCCcEEEEecc
Q 024488          221 GKAKKMAEDIILDFSKNSDMAVMILRLV  248 (267)
Q Consensus       221 ~~sK~a~e~l~~~~a~e~g~~~~~vrp~  248 (267)
                      +.||.++|.+++.+++     ..++|++
T Consensus       142 g~sK~~~E~~~~~y~~-----~~~lr~~  164 (298)
T PLN02778        142 SKTKAMVEELLKNYEN-----VCTLRVR  164 (298)
T ss_pred             HHHHHHHHHHHHHhhc-----cEEeeec
Confidence            9999999999998764     3456665

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.85  E-value=1.6e-20  Score=155.40  Aligned_cols=186  Identities=26%  Similarity=0.224  Sum_probs=157.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhc-CCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQEL-FPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +|++||||-||.-|..|++.|+++||.|+.+.|..+......-.+.+. .....+++++.+|++|...+.++++.-++|-
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE   81 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE   81 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence            489999999999999999999999999999987532221111011122 1223468899999999999999999989999


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC--CEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHH
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV--DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKM  226 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a  226 (267)
                      |+|+|+.++.+.+.+.|+...+.+..|+.++|++++-.+.  -||...||+..||.....|.+|..|..|.++|+++|..
T Consensus        82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlY  161 (345)
T COG1089          82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLY  161 (345)
T ss_pred             heeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHH
Confidence            9999999999889999999999999999999999988754  58888999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhcCCCcEEEEeccccccccceeecCCC
Q 024488          227 AEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       227 ~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      +..++..|++.+|+-.+.=..+       |.-+|..
T Consensus       162 a~W~tvNYResYgl~AcnGILF-------NHESP~R  190 (345)
T COG1089         162 AYWITVNYRESYGLFACNGILF-------NHESPLR  190 (345)
T ss_pred             HHheeeehHhhcCceeecceee-------cCCCCCC
Confidence            9999999999999887776666       7777654

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.85  E-value=4.6e-20  Score=159.27  Aligned_cols=182  Identities=21%  Similarity=0.263  Sum_probs=137.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCCcchhhhhhhcC--------CCCCceEEEEccCC------CHH
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELF--------PEPGRLQFIYADLG------DAK  135 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~~Dl~------d~~  135 (267)
                      ++||+||||||+|++++.+|+.+- .+|+|+.|-. +.+.+.+.+++..        ....+++.+.+|+.      +..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~-s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~   79 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQ-SDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER   79 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecC-CHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence            479999999999999999998874 5999999743 3233333232221        12468999999998      555


Q ss_pred             HHHHHhhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCC----CCC
Q 024488          136 AVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPI----TEE  211 (267)
Q Consensus       136 ~v~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~----~e~  211 (267)
                      .++.+.+  .+|.|||||+...   ......+....|+.||..++..+...+.+.+.++||.+++........    ++.
T Consensus        80 ~~~~La~--~vD~I~H~gA~Vn---~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~  154 (382)
T COG3320          80 TWQELAE--NVDLIIHNAALVN---HVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEI  154 (382)
T ss_pred             HHHHHhh--hcceEEecchhhc---ccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccc
Confidence            7777777  7999999998643   122345677889999999999998888888999999998754322211    211


Q ss_pred             C-----CCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCCCC
Q 024488          212 T-----PQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTDRR  266 (267)
Q Consensus       212 ~-----~~~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~~~  266 (267)
                      +     ...+.+.|+.||.++|.+++...+. |++++++|||       .+.|+..+|..
T Consensus       155 ~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg-------~I~gds~tG~~  206 (382)
T COG3320         155 SPTRNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPG-------YITGDSRTGAL  206 (382)
T ss_pred             cccccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecC-------eeeccCccCcc
Confidence            1     2345678999999999999999886 9999999999       88888877654

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=7.4e-20  Score=167.65  Aligned_cols=168  Identities=15%  Similarity=0.078  Sum_probs=127.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +++++||||+||||++++++|+++|++|+++++.. ..+.+.+..+++     ...++.+|++|.++++++++.     +
T Consensus       210 g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~-~~~~l~~~~~~~-----~~~~~~~Dv~~~~~~~~~~~~~~~~~g  283 (450)
T PRK08261        210 GKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPA-AGEALAAVANRV-----GGTALALDITAPDAPARIAEHLAERHG  283 (450)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCc-cHHHHHHHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHhCC
Confidence            38999999999999999999999999999998632 222222222222     235788999999999888875     4


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESMAR----HGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~----~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+.......    +..+..++.|+.++..+...+..    ...++||++||.+.+.           +.+.
T Consensus       284 ~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~-----------g~~~  352 (450)
T PRK08261        284 GLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIA-----------GNRG  352 (450)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC-----------CCCC
Confidence            799999999986543322    23344566777887777766654    2347999999977652           3345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.+|++.+.++++++.+   .|++++.+.||.+.+.+
T Consensus       353 ~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~  393 (450)
T PRK08261        353 QTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQM  393 (450)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchh
Confidence            789999999999999999887   58999999999887744

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.84  E-value=3.5e-20  Score=156.03  Aligned_cols=161  Identities=20%  Similarity=0.206  Sum_probs=119.7

Q ss_pred             cCC--ChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc------CCCCE
Q 024488           77 GGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------NAFDA  148 (267)
Q Consensus        77 Gas--ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------~~~D~  148 (267)
                      |++  +|||+++|++|+++|++|++++|+..   +..+.++++.... ...++++|++|+++++++++.      +++|+
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~---~~~~~~~~l~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~   76 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEE---KLADALEELAKEY-GAEVIQCDLSDEESVEALFDEAVERFGGRIDI   76 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHH---HHHHHHHHHHHHT-TSEEEESCTTSHHHHHHHHHHHHHHHCSSESE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChH---HHHHHHHHHHHHc-CCceEeecCcchHHHHHHHHHHHhhcCCCeEE
Confidence            566  99999999999999999999996443   3222232222111 233699999999999998876      78999


Q ss_pred             EEEccccCCc----CCCccChHHHHHHhHHH--------HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          149 VMHFAAVAYV----GESTLDPLKYYHNITSN--------TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       149 li~~Ag~~~~----~~~~~~~~~~~~~~~~~--------~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ||||||....    .+..+...+.|+..+..        ++.++|.|.+.  ++||++||.+...           +.+.
T Consensus        77 lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~-----------~~~~  143 (241)
T PF13561_consen   77 LVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQR-----------PMPG  143 (241)
T ss_dssp             EEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTS-----------BSTT
T ss_pred             EEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcc-----------cCcc
Confidence            9999998654    34444444555444333        45566666554  6899999976652           4556


Q ss_pred             CChHHHHHHHHHHHHHHhhhc----CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN----SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e----~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.+|++++.+++.++.|    +||++++|.||+|.|..
T Consensus       144 ~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~  185 (241)
T PF13561_consen  144 YSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPM  185 (241)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccc
Confidence            779999999999999999987    47999999999888743

...

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.84  E-value=7.9e-20  Score=160.07  Aligned_cols=149  Identities=21%  Similarity=0.280  Sum_probs=118.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+|+||||||+||++++++|+++|++|++++|+....    +.+.     ..+++++.+|++|++++.++++  ++|+||
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~----~~l~-----~~~v~~v~~Dl~d~~~l~~al~--g~d~Vi   69 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKA----SFLK-----EWGAELVYGDLSLPETLPPSFK--GVTAII   69 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHh----hhHh-----hcCCEEEECCCCCHHHHHHHHC--CCCEEE
Confidence            4799999999999999999999999999999754221    1111     1258899999999999999998  799999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (267)
                      |+++..     ..++...++.|..++.++++++.+.+.+++|++||.+...             .+...|..+|...|.+
T Consensus        70 ~~~~~~-----~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~-------------~~~~~~~~~K~~~e~~  131 (317)
T CHL00194         70 DASTSR-----PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQ-------------YPYIPLMKLKSDIEQK  131 (317)
T ss_pred             ECCCCC-----CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccc-------------cCCChHHHHHHHHHHH
Confidence            987642     1233456677889999999999999999999999954321             1135689999999987


Q ss_pred             HHHhhhcCCCcEEEEecccccc
Q 024488          231 ILDFSKNSDMAVMILRLVVFFT  252 (267)
Q Consensus       231 ~~~~a~e~g~~~~~vrp~~v~~  252 (267)
                      ++.    .+++++++||+.++.
T Consensus       132 l~~----~~l~~tilRp~~~~~  149 (317)
T CHL00194        132 LKK----SGIPYTIFRLAGFFQ  149 (317)
T ss_pred             HHH----cCCCeEEEeecHHhh
Confidence            764    789999999996654

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.83  E-value=1.3e-19  Score=153.47  Aligned_cols=167  Identities=21%  Similarity=0.179  Sum_probs=116.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC-HHHHHHHh-hcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFF-SENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~-~~~~~D  147 (267)
                      +|+|+||||||+||++++++|+++|++|+++.|+...   ..+..    .....+.++.+|++| .+++.+.+ .  ++|
T Consensus        17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~---~~~~~----~~~~~~~~~~~Dl~d~~~~l~~~~~~--~~d   87 (251)
T PLN00141         17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDK---AKTSL----PQDPSLQIVRADVTEGSDKLVEAIGD--DSD   87 (251)
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHH---HHHhc----ccCCceEEEEeeCCCCHHHHHHHhhc--CCC
Confidence            5899999999999999999999999999998865422   11111    112368889999998 45665555 3  799


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCC-CCCCCChHHHHHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET-PQAPINPYGKAKKM  226 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~-~~~~~~~Y~~sK~a  226 (267)
                      +|||++|.....    .+...++.|..++.++++.+.+.+.++||++||.++|+.....+..+.. ...+...|..+|..
T Consensus        88 ~vi~~~g~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~  163 (251)
T PLN00141         88 AVICATGFRRSF----DPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQ  163 (251)
T ss_pred             EEEECCCCCcCC----CCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHH
Confidence            999999864211    1222346677889999999999888999999999998743222111110 00112233445666


Q ss_pred             HHHHHHHhhhcCCCcEEEEeccccccc
Q 024488          227 AEDIILDFSKNSDMAVMILRLVVFFTL  253 (267)
Q Consensus       227 ~e~l~~~~a~e~g~~~~~vrp~~v~~~  253 (267)
                      .|.+++.    .++++++|||+++++.
T Consensus       164 ~e~~l~~----~gi~~~iirpg~~~~~  186 (251)
T PLN00141        164 AEKYIRK----SGINYTIVRPGGLTND  186 (251)
T ss_pred             HHHHHHh----cCCcEEEEECCCccCC
Confidence            6665543    6899999999977763

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.83  E-value=1.8e-19  Score=155.42  Aligned_cols=166  Identities=22%  Similarity=0.255  Sum_probs=118.6

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEEc
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHF  152 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li~~  152 (267)
                      ||||||+|+||++++++|+++|++|++++|+........           ...  ..|+.. +.+...+.  ++|+|||+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~--~~~~~~-~~~~~~~~--~~D~Vvh~   64 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK-----------WEG--YKPWAP-LAESEALE--GADAVINL   64 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc-----------cee--eecccc-cchhhhcC--CCCEEEEC
Confidence            689999999999999999999999999998654322110           001  112222 23334444  79999999


Q ss_pred             cccCCcCC--CccChHHHHHHhHHHHHHHHHHHHHcCCC--EEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 024488          153 AAVAYVGE--STLDPLKYYHNITSNTLVVLESMARHGVD--TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (267)
Q Consensus       153 Ag~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (267)
                      ||......  ....+++.++.|+.+++++++++.+.+.+  ++|+.||...||.....+++|+.+..+.+.|+..+...|
T Consensus        65 a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e  144 (292)
T TIGR01777        65 AGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWE  144 (292)
T ss_pred             CCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHH
Confidence            99753321  22344567788999999999999988753  566667777898766667888875555666777777777


Q ss_pred             HHHHHhhhcCCCcEEEEeccccccccceeecCCC
Q 024488          229 DIILDFSKNSDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       229 ~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      .....+. +.+++++++||+       ++|||++
T Consensus       145 ~~~~~~~-~~~~~~~ilR~~-------~v~G~~~  170 (292)
T TIGR01777       145 EAAQAAE-DLGTRVVLLRTG-------IVLGPKG  170 (292)
T ss_pred             HHhhhch-hcCCceEEEeee-------eEECCCc
Confidence            7766543 468999999999       8888863

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.83  E-value=3.5e-19  Score=159.52  Aligned_cols=164  Identities=17%  Similarity=0.136  Sum_probs=115.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|+++|||||||||++++++|+++|++|++++|+.   ++..+...+   ....+..+.+|++|.+++.+.+.  ++|++
T Consensus       178 gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~---~~l~~~~~~---~~~~v~~v~~Dvsd~~~v~~~l~--~IDiL  249 (406)
T PRK07424        178 GKTVAVTGASGTLGQALLKELHQQGAKVVALTSNS---DKITLEING---EDLPVKTLHWQVGQEAALAELLE--KVDIL  249 (406)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHhh---cCCCeEEEEeeCCCHHHHHHHhC--CCCEE
Confidence            48999999999999999999999999999998643   222222211   12346788999999999988876  89999


Q ss_pred             EEccccCCcCC-CccChHHHHHHhHHHHHH----HHHHHHHcCC----CEEEEEeccccccCCCCCCCCCCCCCCCCChH
Q 024488          150 MHFAAVAYVGE-STLDPLKYYHNITSNTLV----VLESMARHGV----DTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (267)
Q Consensus       150 i~~Ag~~~~~~-~~~~~~~~~~~~~~~~~~----~l~~~~~~~~----~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (267)
                      |||||...... ..++.++.++.|..++..    ++|.|.+.+.    +.+|++|+ +..            ..+....|
T Consensus       250 InnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~------------~~~~~~~Y  316 (406)
T PRK07424        250 IINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEV------------NPAFSPLY  316 (406)
T ss_pred             EECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccc------------cCCCchHH
Confidence            99999754322 223445667788887544    5666665532    34566655 222            11224579


Q ss_pred             HHHHHHHHHHHHHhhhcCCCcEEEEecccccccc
Q 024488          221 GKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLV  254 (267)
Q Consensus       221 ~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~  254 (267)
                      ++||++.+.++...+.+.++.+..+.||.+.+.+
T Consensus       317 ~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~~  350 (406)
T PRK07424        317 ELSKRALGDLVTLRRLDAPCVVRKLILGPFKSNL  350 (406)
T ss_pred             HHHHHHHHHHHHHHHhCCCCceEEEEeCCCcCCC
Confidence            9999999999865555567777778888766644

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.82  E-value=8.4e-19  Score=163.52  Aligned_cols=175  Identities=15%  Similarity=0.198  Sum_probs=128.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC---eEEEEecCCCCCcchhhhh-hhcC------------C------CCCceEEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY---RVTIVDNLSRGNIGAVKVL-QELF------------P------EPGRLQFI  127 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~~-~~~~------------~------~~~~~~~~  127 (267)
                      +|+|+|||||||||.+++++|++.+.   +|+++.|...... ..+.+ +++.            .      ...++..+
T Consensus       119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~-a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        119 GKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEA-AIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchh-HHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            49999999999999999999998764   6788887544322 22222 1110            0      02468899


Q ss_pred             EccCCCH------HHHHHHhhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEEeccccc
Q 024488          128 YADLGDA------KAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATY  200 (267)
Q Consensus       128 ~~Dl~d~------~~v~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~iV~vSS~~~~  200 (267)
                      .+|++++      ++.+.+.+  .+|+|||+|+....   ....+..++.|+.++.++++.+.+. +.+++|++||..+|
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~~--~vDiVIH~AA~v~f---~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVy  272 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIAK--EVDVIINSAANTTF---DERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVN  272 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHHh--cCCEEEECcccccc---ccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceee
Confidence            9999986      45566665  69999999997642   3467788999999999999999886 46789999999999


Q ss_pred             cCCCC----CCCC--C--------------------------------C---C-----------------CCCCCChHHH
Q 024488          201 GEPEK----MPIT--E--------------------------------E---T-----------------PQAPINPYGK  222 (267)
Q Consensus       201 g~~~~----~~~~--e--------------------------------~---~-----------------~~~~~~~Y~~  222 (267)
                      |...+    .+++  +                                .   .                 -....+.|..
T Consensus       273 G~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~  352 (605)
T PLN02503        273 GQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVF  352 (605)
T ss_pred             cCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHH
Confidence            86532    1111  0                                0   0                 0112378999


Q ss_pred             HHHHHHHHHHHhhhcCCCcEEEEecccccc
Q 024488          223 AKKMAEDIILDFSKNSDMAVMILRLVVFFT  252 (267)
Q Consensus       223 sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~  252 (267)
                      ||+.+|++++..+  .+++++++||+.|-+
T Consensus       353 TK~lAE~lV~~~~--~~LPv~IvRPsiV~s  380 (605)
T PLN02503        353 TKAMGEMVINSMR--GDIPVVIIRPSVIES  380 (605)
T ss_pred             HHHHHHHHHHHhc--CCCCEEEEcCCEecc
Confidence            9999999999765  479999999998843

>PLN00016 RNA-binding protein; Provisional

Probab=99.81  E-value=5.7e-19  Score=158.29  Aligned_cols=159  Identities=18%  Similarity=0.247  Sum_probs=118.8

Q ss_pred             CCcEEEEE----cCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhh----hhhhcCCCCCceEEEEccCCCHHHHHHH
Q 024488           69 GVTHVLVT----GGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVK----VLQELFPEPGRLQFIYADLGDAKAVNKF  140 (267)
Q Consensus        69 ~~k~vlVT----GasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~d~~~v~~~  140 (267)
                      .+++||||    ||+|+||++++++|+++||+|++++|..........    ...++.  ...++++.+|+.|   +.++
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d---~~~~  125 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS--SAGVKTVWGDPAD---VKSK  125 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh--hcCceEEEecHHH---HHhh
Confidence            34789999    999999999999999999999999986432111100    011111  1247888999876   4455


Q ss_pred             hhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChH
Q 024488          141 FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (267)
Q Consensus       141 ~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (267)
                      +...++|+|||+++..                ..+++.+++++.+.+.++||++||.++|+.....+..|+.+..+..  
T Consensus       126 ~~~~~~d~Vi~~~~~~----------------~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~--  187 (378)
T PLN00016        126 VAGAGFDVVYDNNGKD----------------LDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA--  187 (378)
T ss_pred             hccCCccEEEeCCCCC----------------HHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc--
Confidence            5444799999997521                2357788999999999999999999999876666677776655543  


Q ss_pred             HHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          221 GKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       221 ~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                        +|..+|.+++.    .+++++++||+       ++|||+..
T Consensus       188 --sK~~~E~~l~~----~~l~~~ilRp~-------~vyG~~~~  217 (378)
T PLN00016        188 --GHLEVEAYLQK----LGVNWTSFRPQ-------YIYGPGNN  217 (378)
T ss_pred             --hHHHHHHHHHH----cCCCeEEEece-------eEECCCCC
Confidence              89999987754    68999999999       88888653

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.81  E-value=1.9e-18  Score=139.29  Aligned_cols=150  Identities=24%  Similarity=0.356  Sum_probs=118.2

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEEc
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHF  152 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li~~  152 (267)
                      |+|+||||++|+.++++|+++|++|+++.|++.+   ..+        ..+++++.+|+.|++++.++++  ++|+||++
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~---~~~--------~~~~~~~~~d~~d~~~~~~al~--~~d~vi~~   67 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSK---AED--------SPGVEIIQGDLFDPDSVKAALK--GADAVIHA   67 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGG---HHH--------CTTEEEEESCTTCHHHHHHHHT--TSSEEEEC
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchh---ccc--------ccccccceeeehhhhhhhhhhh--hcchhhhh
Confidence            7999999999999999999999999999975432   211        3579999999999999999998  89999999


Q ss_pred             cccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 024488          153 AAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIIL  232 (267)
Q Consensus       153 Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~  232 (267)
                      +|....       +      ...++.+++++.+.+.+++|++||..+|...........  .+....|...|...|.+++
T Consensus        68 ~~~~~~-------~------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~e~~~~  132 (183)
T PF13460_consen   68 AGPPPK-------D------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDED--KPIFPEYARDKREAEEALR  132 (183)
T ss_dssp             CHSTTT-------H------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGT--CGGGHHHHHHHHHHHHHHH
T ss_pred             hhhhcc-------c------ccccccccccccccccccceeeeccccCCCCCccccccc--ccchhhhHHHHHHHHHHHH
Confidence            975322       1      567888999999999999999999999864322101111  1112578899988888775


Q ss_pred             HhhhcCCCcEEEEeccccccccceeecCC
Q 024488          233 DFSKNSDMAVMILRLVVFFTLVAFVIKIN  261 (267)
Q Consensus       233 ~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~  261 (267)
                      .    .+++++++||+       .+||+.
T Consensus       133 ~----~~~~~~ivrp~-------~~~~~~  150 (183)
T PF13460_consen  133 E----SGLNWTIVRPG-------WIYGNP  150 (183)
T ss_dssp             H----STSEEEEEEES-------EEEBTT
T ss_pred             h----cCCCEEEEECc-------EeEeCC
Confidence            4    69999999999       666665

...

>PRK05865 hypothetical protein; Provisional

Probab=99.80  E-value=2.2e-18  Score=165.66  Aligned_cols=132  Identities=27%  Similarity=0.362  Sum_probs=111.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+|+||||+|+||++++++|+++|++|++++|+....         .   ...+.++.+|++|.+++.++++  ++|+||
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---------~---~~~v~~v~gDL~D~~~l~~al~--~vD~VV   66 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS---------W---PSSADFIAADIRDATAVESAMT--GADVVA   66 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---------c---ccCceEEEeeCCCHHHHHHHHh--CCCEEE
Confidence            4799999999999999999999999999999743210         0   1257789999999999999998  799999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (267)
                      |+|+....         .++.|+.++.+++++|.+.+.++||++||..                         |.++|.+
T Consensus        67 HlAa~~~~---------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~-------------------------K~aaE~l  112 (854)
T PRK05865         67 HCAWVRGR---------NDHINIDGTANVLKAMAETGTGRIVFTSSGH-------------------------QPRVEQM  112 (854)
T ss_pred             ECCCcccc---------hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH-------------------------HHHHHHH
Confidence            99985321         4678999999999999999889999999931                         8888887


Q ss_pred             HHHhhhcCCCcEEEEeccccccccceeecCC
Q 024488          231 ILDFSKNSDMAVMILRLVVFFTLVAFVIKIN  261 (267)
Q Consensus       231 ~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~  261 (267)
                      ++.    ++++++++||+       ++|||+
T Consensus       113 l~~----~gl~~vILRp~-------~VYGP~  132 (854)
T PRK05865        113 LAD----CGLEWVAVRCA-------LIFGRN  132 (854)
T ss_pred             HHH----cCCCEEEEEec-------eEeCCC
Confidence            754    78999999999       888886

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.79  E-value=3.3e-18  Score=163.88  Aligned_cols=145  Identities=17%  Similarity=0.174  Sum_probs=115.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||+|+||+++++.|.++|++|...                           ..|++|.+.+...++..++|+||
T Consensus       381 mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~---------------------------~~~l~d~~~v~~~i~~~~pd~Vi  433 (668)
T PLN02260        381 LKFLIYGRTGWIGGLLGKLCEKQGIAYEYG---------------------------KGRLEDRSSLLADIRNVKPTHVF  433 (668)
T ss_pred             ceEEEECCCchHHHHHHHHHHhCCCeEEee---------------------------ccccccHHHHHHHHHhhCCCEEE
Confidence            689999999999999999999999987321                           14678888888888777899999


Q ss_pred             EccccCCcC---CCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCC------CCCCCCCCCCCC-CCChH
Q 024488          151 HFAAVAYVG---ESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP------EKMPITEETPQA-PINPY  220 (267)
Q Consensus       151 ~~Ag~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~------~~~~~~e~~~~~-~~~~Y  220 (267)
                      |+|+.....   ..+.++++.++.|..++.++++++++.+. ++|++||..+|+..      ...+++|+++.. +.+.|
T Consensus       434 h~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Y  512 (668)
T PLN02260        434 NAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFY  512 (668)
T ss_pred             ECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCCCCChh
Confidence            999976432   24567888999999999999999999887 56777888887531      134677776554 45899


Q ss_pred             HHHHHHHHHHHHHhhhcCCCcEEEEecc
Q 024488          221 GKAKKMAEDIILDFSKNSDMAVMILRLV  248 (267)
Q Consensus       221 ~~sK~a~e~l~~~~a~e~g~~~~~vrp~  248 (267)
                      +.||.++|.+++.+.     +..++|+.
T Consensus       513 g~sK~~~E~~~~~~~-----~~~~~r~~  535 (668)
T PLN02260        513 SKTKAMVEELLREYD-----NVCTLRVR  535 (668)
T ss_pred             hHHHHHHHHHHHhhh-----hheEEEEE
Confidence            999999999998864     34566666

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.77  E-value=8.3e-18  Score=176.41  Aligned_cols=173  Identities=16%  Similarity=0.153  Sum_probs=134.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCC----------------------------------------
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGN----------------------------------------  107 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~-G~~V~~~~r~~~~~----------------------------------------  107 (267)
                      .++++|||||++|||.+++++|+++ |++|++++|+....                                        
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            3489999999999999999999998 69999999862100                                        


Q ss_pred             ----cchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----CCCCEEEEccccCCcCCC----ccChHHHHHHhHHH
Q 024488          108 ----IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NAFDAVMHFAAVAYVGES----TLDPLKYYHNITSN  175 (267)
Q Consensus       108 ----~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~~D~li~~Ag~~~~~~~----~~~~~~~~~~~~~~  175 (267)
                          .+..+.++++...+.++.++.+|++|.++++++++.    +++|+||||||+......    .+..+..++.|+.+
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence                011112233333456789999999999999988876    579999999998654432    23444567788888


Q ss_pred             HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhcC-CCcEEEEecccccc
Q 024488          176 TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS-DMAVMILRLVVFFT  252 (267)
Q Consensus       176 ~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e~-g~~~~~vrp~~v~~  252 (267)
                      +.++++.+.....++||++||.+.+.           +......|+.+|.++..+++.++.+. +++++.|.||.+-+
T Consensus      2156 ~~~Ll~al~~~~~~~IV~~SSvag~~-----------G~~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdt 2222 (2582)
T TIGR02813      2156 LLSLLAALNAENIKLLALFSSAAGFY-----------GNTGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDG 2222 (2582)
T ss_pred             HHHHHHHHHHhCCCeEEEEechhhcC-----------CCCCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecC
Confidence            99999999887778999999977652           33457789999999999999999874 68999999995544

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.77  E-value=1.7e-17  Score=170.65  Aligned_cols=183  Identities=20%  Similarity=0.219  Sum_probs=133.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC----CeEEEEecCCCCCcchhhhhhhcC-------CCCCceEEEEccCC------
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS----YRVTIVDNLSRGNIGAVKVLQELF-------PEPGRLQFIYADLG------  132 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~~~Dl~------  132 (267)
                      .++|+||||+|+||.+++++|++++    ++|+++.|.........+......       ....+++++.+|++      
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            4899999999999999999999887    899998875433222211111100       01136889999997      


Q ss_pred             CHHHHHHHhhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCC--------
Q 024488          133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPE--------  204 (267)
Q Consensus       133 d~~~v~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~--------  204 (267)
                      +.+.+..+.+  ++|+|||||+....   ..........|+.++.++++.+.+.+.++++++||.++|+...        
T Consensus      1051 ~~~~~~~l~~--~~d~iiH~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~ 1125 (1389)
T TIGR03443      1051 SDEKWSDLTN--EVDVIIHNGALVHW---VYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDEL 1125 (1389)
T ss_pred             CHHHHHHHHh--cCCEEEECCcEecC---ccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhh
Confidence            4456666665  79999999997532   2223344457999999999999988888999999999986321        


Q ss_pred             ----CCCCCCCCC-----CCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCCC
Q 024488          205 ----KMPITEETP-----QAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTDR  265 (267)
Q Consensus       205 ----~~~~~e~~~-----~~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~~  265 (267)
                          ...+.|+.+     ..+.+.|+.||.++|.++..+++ .|++++++|||       ++|||+..+.
T Consensus      1126 ~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg-------~v~G~~~~g~ 1187 (1389)
T TIGR03443      1126 VQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPG-------YVTGDSKTGA 1187 (1389)
T ss_pred             hhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCC-------ccccCCCcCC
Confidence                112333322     22346799999999999998776 59999999999       9999876654

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.76  E-value=3e-19  Score=137.71  Aligned_cols=165  Identities=24%  Similarity=0.305  Sum_probs=126.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      -+.+||||.+|+|++.++.|+++|+.|++++--..   +..+..+++   ++++.|.+.|++++++++.++..     ++
T Consensus        10 lvalvtggasglg~ataerlakqgasv~lldlp~s---kg~~vakel---g~~~vf~padvtsekdv~aala~ak~kfgr   83 (260)
T KOG1199|consen   10 LVALVTGGASGLGKATAERLAKQGASVALLDLPQS---KGADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKFGR   83 (260)
T ss_pred             eeEEeecCcccccHHHHHHHHhcCceEEEEeCCcc---cchHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhccc
Confidence            78999999999999999999999999999984222   223334444   67899999999999999988875     79


Q ss_pred             CCEEEEccccCCcCC----------CccChHHHHHHhHHHHHHHHHH----HHHc----C--CCEEEEEeccccccCCCC
Q 024488          146 FDAVMHFAAVAYVGE----------STLDPLKYYHNITSNTLVVLES----MARH----G--VDTLIYSSTCATYGEPEK  205 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~----------~~~~~~~~~~~~~~~~~~~l~~----~~~~----~--~~~iV~vSS~~~~g~~~~  205 (267)
                      +|.+|||||+.....          ..++....++.|..+|.+++..    |-++    +  .+.||+..|++.+.    
T Consensus        84 ld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafd----  159 (260)
T KOG1199|consen   84 LDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFD----  159 (260)
T ss_pred             eeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeec----
Confidence            999999999853211          1123333445677777776554    3222    1  35799999999984    


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccc
Q 024488          206 MPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFT  252 (267)
Q Consensus       206 ~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~  252 (267)
                             ......+|++||.+...++.-++++   .|++++.|-||.+.|
T Consensus       160 -------gq~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~t  202 (260)
T KOG1199|consen  160 -------GQTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDT  202 (260)
T ss_pred             -------CccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCC
Confidence                   3445789999999999999988887   589999999997766

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.76  E-value=8.2e-18  Score=141.69  Aligned_cols=151  Identities=19%  Similarity=0.116  Sum_probs=113.5

Q ss_pred             HHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc--CCCCEEEEccccCCcCCCcc
Q 024488           86 AALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--NAFDAVMHFAAVAYVGESTL  163 (267)
Q Consensus        86 la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--~~~D~li~~Ag~~~~~~~~~  163 (267)
                      +|++|+++|++|++++|+....    +          ..+++++|++|.++++++++.  +++|+||||||...    ..
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~----~----------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~----~~   62 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGM----T----------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG----TA   62 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchh----h----------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC----CC
Confidence            4789999999999999754221    0          124578999999999999886  57999999999752    23


Q ss_pred             ChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCC----------------CCCCCCCChHHHHHH
Q 024488          164 DPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITE----------------ETPQAPINPYGKAKK  225 (267)
Q Consensus       164 ~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e----------------~~~~~~~~~Y~~sK~  225 (267)
                      ..+..++.|+.++..++..+.+.  ..++||++||.+.++.....+..+                ..+.++...|+.||+
T Consensus        63 ~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  142 (241)
T PRK12428         63 PVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKE  142 (241)
T ss_pred             CHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHH
Confidence            45677888888877766665542  247999999998885322111111                135566789999999


Q ss_pred             HHHHHHHHhh-hc---CCCcEEEEecccccccc
Q 024488          226 MAEDIILDFS-KN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       226 a~e~l~~~~a-~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +.+.+++.++ .+   .|+++++|+||.|.|.+
T Consensus       143 a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~  175 (241)
T PRK12428        143 ALILWTMRQAQPWFGARGIRVNCVAPGPVFTPI  175 (241)
T ss_pred             HHHHHHHHHHHHhhhccCeEEEEeecCCccCcc
Confidence            9999999999 54   68999999999888764

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.75  E-value=6.1e-17  Score=130.59  Aligned_cols=165  Identities=17%  Similarity=0.219  Sum_probs=117.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      ++|||||+|+||..+++.|+++|. +|++++|+.....+..+.++++...+.++.++.+|++|++++++++++     ++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            689999999999999999999975 899999874334444455666655577999999999999999999977     47


Q ss_pred             CCEEEEccccCCcCCCccChHHHH----HHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHH
Q 024488          146 FDAVMHFAAVAYVGESTLDPLKYY----HNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYG  221 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~  221 (267)
                      +|.|||+||........+...+.+    ...+.++.++.+.+.......+|..||.+..-           ..+....|+
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~-----------G~~gq~~Ya  150 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLL-----------GGPGQSAYA  150 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHT-----------T-TTBHHHH
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhc-----------cCcchHhHH
Confidence            899999999865544444333333    44556678888888887888999999976541           334578999


Q ss_pred             HHHHHHHHHHHHhhhcCCCcEEEEecc
Q 024488          222 KAKKMAEDIILDFSKNSDMAVMILRLV  248 (267)
Q Consensus       222 ~sK~a~e~l~~~~a~e~g~~~~~vrp~  248 (267)
                      +.-...+.+++..+. .|.++..|..+
T Consensus       151 aAN~~lda~a~~~~~-~g~~~~sI~wg  176 (181)
T PF08659_consen  151 AANAFLDALARQRRS-RGLPAVSINWG  176 (181)
T ss_dssp             HHHHHHHHHHHHHHH-TTSEEEEEEE-
T ss_pred             HHHHHHHHHHHHHHh-CCCCEEEEEcc
Confidence            999999999998765 68888888666

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.70  E-value=7.3e-17  Score=129.91  Aligned_cols=169  Identities=14%  Similarity=0.091  Sum_probs=115.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      ++.+||||+|.|||..++..+.+++-+....+......+  .+.+.-  ..++.......|++...-+.++.+.     +
T Consensus         6 r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v--~~gd~~v~~~g~~~e~~~l~al~e~~r~k~g   81 (253)
T KOG1204|consen    6 RKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKV--AYGDDFVHVVGDITEEQLLGALREAPRKKGG   81 (253)
T ss_pred             ceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEE--EecCCcceechHHHHHHHHHHHHhhhhhcCC
Confidence            488999999999999999999988866554442211111  111111  1122333445677766655555544     6


Q ss_pred             CCCEEEEccccCCcCC--C--c---cChHHHHHHhHHH----HHHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGE--S--T---LDPLKYYHNITSN----TLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~--~--~---~~~~~~~~~~~~~----~~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                      ..|+||||||...+-.  .  .   +....+|+.|+..    +..++|.+++.. .+.+||+||.+..           .
T Consensus        82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav-----------~  150 (253)
T KOG1204|consen   82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV-----------R  150 (253)
T ss_pred             ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh-----------c
Confidence            7899999999754321  1  1   1223455666555    345666666664 5789999997765           3


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc-C-CCcEEEEeccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKN-S-DMAVMILRLVVFFTL  253 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e-~-g~~~~~vrp~~v~~~  253 (267)
                      |...+.+||.+|+|.+++...++.| + ++++..++||+|-|.
T Consensus       151 p~~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~  193 (253)
T KOG1204|consen  151 PFSSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQ  193 (253)
T ss_pred             cccHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccch
Confidence            7888999999999999999999877 3 899999999988773

>PRK12320 hypothetical protein; Provisional

Probab=99.69  E-value=8e-16  Score=145.32  Aligned_cols=138  Identities=20%  Similarity=0.286  Sum_probs=104.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||+|+||++++++|+++|++|++++|.....            ....++++.+|++|.. +.++++  ++|+||
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~------------~~~~ve~v~~Dl~d~~-l~~al~--~~D~VI   65 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA------------LDPRVDYVCASLRNPV-LQELAG--EADAVI   65 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc------------ccCCceEEEccCCCHH-HHHHhc--CCCEEE
Confidence            3799999999999999999999999999999643210            1235788999999984 677766  789999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (267)
                      |+|+....     .   ....|+.++.++++++++.+. ++|++||.  +|..              ..|.    ..|.+
T Consensus        66 HLAa~~~~-----~---~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~--~G~~--------------~~~~----~aE~l  116 (699)
T PRK12320         66 HLAPVDTS-----A---PGGVGITGLAHVANAAARAGA-RLLFVSQA--AGRP--------------ELYR----QAETL  116 (699)
T ss_pred             EcCccCcc-----c---hhhHHHHHHHHHHHHHHHcCC-eEEEEECC--CCCC--------------cccc----HHHHH
Confidence            99986321     1   124788999999999998886 89999985  3311              1122    35555


Q ss_pred             HHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          231 ILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       231 ~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      +..    ++++++++|++       |+|||+..
T Consensus       117 l~~----~~~p~~ILR~~-------nVYGp~~~  138 (699)
T PRK12320        117 VST----GWAPSLVIRIA-------PPVGRQLD  138 (699)
T ss_pred             HHh----cCCCEEEEeCc-------eecCCCCc
Confidence            543    56899999999       99999654

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.69  E-value=8.3e-16  Score=127.52  Aligned_cols=160  Identities=23%  Similarity=0.255  Sum_probs=115.3

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEEc
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHF  152 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li~~  152 (267)
                      |+||||||+||++|+.+|.+.||+|+++.|++...+..             ...   -+...+.+.+..+. ++|+|||+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~-------------~~~---~v~~~~~~~~~~~~-~~DavINL   63 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQN-------------LHP---NVTLWEGLADALTL-GIDAVINL   63 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhh-------------cCc---cccccchhhhcccC-CCCEEEEC
Confidence            68999999999999999999999999999866433211             110   01112223333332 69999999


Q ss_pred             cccCCcCC--CccChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 024488          153 AAVAYVGE--STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (267)
Q Consensus       153 Ag~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (267)
                      ||......  .....+...+.-+..|+.+.+++.+.  +++.+|+.|.++.||......++|+++ ++...-+..-...|
T Consensus        64 AG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~-~g~~Fla~lc~~WE  142 (297)
T COG1090          64 AGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESP-PGDDFLAQLCQDWE  142 (297)
T ss_pred             CCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCC-CCCChHHHHHHHHH
Confidence            99765433  33455666777888899999998854  566788888888999988888999943 44556666677777


Q ss_pred             HHHHHhhhcCCCcEEEEeccccc
Q 024488          229 DIILDFSKNSDMAVMILRLVVFF  251 (267)
Q Consensus       229 ~l~~~~a~e~g~~~~~vrp~~v~  251 (267)
                      ..+.... +.|.+++.+|.|.|.
T Consensus       143 ~~a~~a~-~~gtRvvllRtGvVL  164 (297)
T COG1090         143 EEALQAQ-QLGTRVVLLRTGVVL  164 (297)
T ss_pred             HHHhhhh-hcCceEEEEEEEEEe
Confidence            7776643 379999999999444

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.69  E-value=3.3e-16  Score=125.92  Aligned_cols=163  Identities=20%  Similarity=0.246  Sum_probs=134.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC---eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY---RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (267)
                      +++|+|||++|-+|++|.+.+.+.|.   +.+..+.                        -.+|+++..+.+++++..++
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s------------------------kd~DLt~~a~t~~lF~~ekP   56 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS------------------------KDADLTNLADTRALFESEKP   56 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc------------------------ccccccchHHHHHHHhccCC
Confidence            48999999999999999999999875   2322220                        14899999999999999899


Q ss_pred             CEEEEccccCCc-CCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCC----CC-CCCChH
Q 024488          147 DAVMHFAAVAYV-GESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET----PQ-APINPY  220 (267)
Q Consensus       147 D~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~----~~-~~~~~Y  220 (267)
                      ..|||.|+.... -.-...+.++++.|+..+-+++..+.+.+.+++|+..|..+|......|++|..    |+ +..-.|
T Consensus        57 thVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gY  136 (315)
T KOG1431|consen   57 THVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGY  136 (315)
T ss_pred             ceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHH
Confidence            999999986422 123446678899999999999999999999999999999999888888998874    23 334479


Q ss_pred             HHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          221 GKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       221 ~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      +.+|..+.-..++|+.++|-..+.+-|.       |+|||.++
T Consensus       137 syAKr~idv~n~aY~~qhg~~~tsviPt-------NvfGphDN  172 (315)
T KOG1431|consen  137 SYAKRMIDVQNQAYRQQHGRDYTSVIPT-------NVFGPHDN  172 (315)
T ss_pred             HHHHHHHHHHHHHHHHHhCCceeeeccc-------cccCCCCC
Confidence            9999888877799999999999999999       99999764

>PRK06720 hypothetical protein; Provisional

Probab=99.64  E-value=5.7e-15  Score=117.56  Aligned_cols=127  Identities=17%  Similarity=0.129  Sum_probs=89.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||++|||++++++|+++|++|++++|+...   ..+..+++...+....++.+|+++.+++++++++     +
T Consensus        16 gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~---~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G   92 (169)
T PRK06720         16 GKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQES---GQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFS   92 (169)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999965432   2222233322345677889999999999887754     6


Q ss_pred             CCCEEEEccccCCcCC-CccChHHHHH-Hh----HHHHHHHHHHHHHcC-------CCEEEEEecccc
Q 024488          145 AFDAVMHFAAVAYVGE-STLDPLKYYH-NI----TSNTLVVLESMARHG-------VDTLIYSSTCAT  199 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~-~~~~~~~~~~-~~----~~~~~~~l~~~~~~~-------~~~iV~vSS~~~  199 (267)
                      ++|++|||||...... .++.+++.++ .+    ..-++.+.+.|.+++       .+|+-.+||.+.
T Consensus        93 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720         93 RIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             CCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence            8999999999865332 3232222222 11    223566777766653       478888888654

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.58  E-value=3.5e-14  Score=122.41  Aligned_cols=136  Identities=18%  Similarity=0.131  Sum_probs=98.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----CC-C
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA-F  146 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~-~  146 (267)
                      +|+||||||+||++++++|+++|++|+++.|++.+..            ..+++.+.+|+.|++++..+++.    .+ +
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~------------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~   68 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA------------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEI   68 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc------------CCCCccccccCCCHHHHHHHHhcccCcCCce
Confidence            4899999999999999999999999999998654321            12456678999999999998842    25 8


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHH
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKM  226 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a  226 (267)
                      |.++++++...     ..        .....++++++++.+.++||++||...+.           . .      ..+..
T Consensus        69 d~v~~~~~~~~-----~~--------~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~-----------~-~------~~~~~  117 (285)
T TIGR03649        69 SAVYLVAPPIP-----DL--------APPMIKFIDFARSKGVRRFVLLSASIIEK-----------G-G------PAMGQ  117 (285)
T ss_pred             eEEEEeCCCCC-----Ch--------hHHHHHHHHHHHHcCCCEEEEeeccccCC-----------C-C------chHHH
Confidence            99999876321     00        12345789999999999999999865531           0 0      12223


Q ss_pred             HHHHHHHhhhcCCCcEEEEeccccccc
Q 024488          227 AEDIILDFSKNSDMAVMILRLVVFFTL  253 (267)
Q Consensus       227 ~e~l~~~~a~e~g~~~~~vrp~~v~~~  253 (267)
                      .+.+++.   ..+++++++||++++..
T Consensus       118 ~~~~l~~---~~gi~~tilRp~~f~~~  141 (285)
T TIGR03649       118 VHAHLDS---LGGVEYTVLRPTWFMEN  141 (285)
T ss_pred             HHHHHHh---ccCCCEEEEeccHHhhh
Confidence            3433332   14899999999988764

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.56  E-value=2.1e-14  Score=117.12  Aligned_cols=171  Identities=25%  Similarity=0.264  Sum_probs=138.9

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCC-----CCCceEEEEccCCCHHHHHHHhhc
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP-----EPGRLQFIYADLGDAKAVNKFFSE  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~d~~~v~~~~~~  143 (267)
                      ..|++||||-+|.=|+.+++-|+.+||+|..+-|...+...  ..++.+..     ++.......+|++|..++.+++..
T Consensus        27 ~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT--~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~  104 (376)
T KOG1372|consen   27 PRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNT--ARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIST  104 (376)
T ss_pred             cceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccch--hhhhhhhcCchhcccceeEEeeccccchHHHHHHHhc
Confidence            34799999999999999999999999999998875443221  11222222     234677888999999999999998


Q ss_pred             CCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC---CCEEEEEeccccccCCCCCCCCCCCCCCCCChH
Q 024488          144 NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG---VDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (267)
                      -+++-|+|+|+.....-+.+.++-.-+....|+..+|++++.++   .-++-..||+..||.....|-.|..|.-|.++|
T Consensus       105 ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPY  184 (376)
T KOG1372|consen  105 IKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPY  184 (376)
T ss_pred             cCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChh
Confidence            88999999999887766556666556667788999999999876   357888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCc
Q 024488          221 GKAKKMAEDIILDFSKNSDMA  241 (267)
Q Consensus       221 ~~sK~a~e~l~~~~a~e~g~~  241 (267)
                      +++|...-..+-.|++.+++=
T Consensus       185 a~aKmy~~WivvNyREAYnmf  205 (376)
T KOG1372|consen  185 AAAKMYGYWIVVNYREAYNMF  205 (376)
T ss_pred             HHhhhhheEEEEEhHHhhcce
Confidence            999999988887877776653

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.54  E-value=8.9e-14  Score=113.77  Aligned_cols=181  Identities=12%  Similarity=0.183  Sum_probs=123.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-----eEEEEecCCCCCcchhhhhhhcCCC-CCceEEEEccCCCHHHHHHHhhc
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-----RVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSE  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-----~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~  143 (267)
                      .|.++|||+++|||.+++++|++...     ++++++|+-++.+++...+++..+. .-++.++.+|+++..++..+.++
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            48899999999999999999998754     4666676655555555555554332 34788999999999998887766


Q ss_pred             -----CCCCEEEEccccCCcCC-------------------------------CccChHHHHHHhHHH----HHHHHHHH
Q 024488          144 -----NAFDAVMHFAAVAYVGE-------------------------------STLDPLKYYHNITSN----TLVVLESM  183 (267)
Q Consensus       144 -----~~~D~li~~Ag~~~~~~-------------------------------~~~~~~~~~~~~~~~----~~~~l~~~  183 (267)
                           .++|.|+-|||++..+.                               +.+.-.+.++.|+.|    ...+.|.+
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence                 68999999999864321                               111223345555555    33456665


Q ss_pred             HHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccc
Q 024488          184 ARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFT  252 (267)
Q Consensus       184 ~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~  252 (267)
                      -......+|++||...--  ..-.+.+-.......+|..||.+..-+-.+.-+.   .|+...++.||..-+
T Consensus       163 ~~~~~~~lvwtSS~~a~k--k~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt  232 (341)
T KOG1478|consen  163 CHSDNPQLVWTSSRMARK--KNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTT  232 (341)
T ss_pred             hcCCCCeEEEEeeccccc--ccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeec
Confidence            555556999999965531  1111111123345678999999999988887765   478888889985443

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.53  E-value=7.7e-13  Score=116.38  Aligned_cols=174  Identities=16%  Similarity=0.009  Sum_probs=110.0

Q ss_pred             CCCcEEEEEcCCChhHHH--HHHHHHhCCCeEEEEecCCCCCcc---------hhhhhhhcCCCCCceEEEEccCCCHHH
Q 024488           68 EGVTHVLVTGGAGYIGSH--AALRLLKDSYRVTIVDNLSRGNIG---------AVKVLQELFPEPGRLQFIYADLGDAKA  136 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~--la~~L~~~G~~V~~~~r~~~~~~~---------~~~~~~~~~~~~~~~~~~~~Dl~d~~~  136 (267)
                      .++|++|||||++|||.+  +|++| +.|++|+++++.....+.         .....+.....+..+..+.+|+++.++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            345999999999999999  89999 999999888753211110         011111122224457789999999999


Q ss_pred             HHHHhhc-----CCCCEEEEccccCCcCC-----------------Cc-----------------cChHHHHHHh--HHH
Q 024488          137 VNKFFSE-----NAFDAVMHFAAVAYVGE-----------------ST-----------------LDPLKYYHNI--TSN  175 (267)
Q Consensus       137 v~~~~~~-----~~~D~li~~Ag~~~~~~-----------------~~-----------------~~~~~~~~~~--~~~  175 (267)
                      ++++++.     +++|+||||+|......                 ..                 .-.++.++..  +.+
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMg  197 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMG  197 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhc
Confidence            9988876     78999999999763211                 00                 0001111100  111


Q ss_pred             ---------HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC--ChHHHHHHHHHHHHHHhhhc---CCCc
Q 024488          176 ---------TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI--NPYGKAKKMAEDIILDFSKN---SDMA  241 (267)
Q Consensus       176 ---------~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~--~~Y~~sK~a~e~l~~~~a~e---~g~~  241 (267)
                               .+...+.|.  ...++|..|..+.-           ...+-+  ..-|.+|+++|..++.++.+   .|++
T Consensus       198 gedw~~Wi~al~~a~lla--~g~~~va~TY~G~~-----------~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~gir  264 (398)
T PRK13656        198 GEDWELWIDALDEAGVLA--EGAKTVAYSYIGPE-----------LTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGD  264 (398)
T ss_pred             cchHHHHHHHHHhccccc--CCcEEEEEecCCcc-----------eeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCE
Confidence                     111122221  24677777763321           122222  46799999999999999988   4789


Q ss_pred             EEEEeccccccccc
Q 024488          242 VMILRLVVFFTLVA  255 (267)
Q Consensus       242 ~~~vrp~~v~~~~~  255 (267)
                      +.++..+.+.|.-+
T Consensus       265 an~i~~g~~~T~As  278 (398)
T PRK13656        265 AYVSVLKAVVTQAS  278 (398)
T ss_pred             EEEEecCcccchhh
Confidence            99999998887443

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.52  E-value=1.7e-13  Score=114.00  Aligned_cols=156  Identities=15%  Similarity=0.159  Sum_probs=121.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +-++-|.|||||+|+.++.+|++.|-+|++-.|.....-   ..++-+ ..-+++.+++.|+.|+++++++++  .-++|
T Consensus        61 GiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~---r~lkvm-GdLGQvl~~~fd~~DedSIr~vvk--~sNVV  134 (391)
T KOG2865|consen   61 GIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDP---RHLKVM-GDLGQVLFMKFDLRDEDSIRAVVK--HSNVV  134 (391)
T ss_pred             ceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccch---hheeec-ccccceeeeccCCCCHHHHHHHHH--hCcEE
Confidence            367889999999999999999999999999987433221   122222 123578999999999999999999  67999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (267)
                      ||+-|--    .+.....+.+.|..+.+.+...+++.+..++|++|+...-             ....+-|-.+|++.|.
T Consensus       135 INLIGrd----~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lgan-------------v~s~Sr~LrsK~~gE~  197 (391)
T KOG2865|consen  135 INLIGRD----YETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGAN-------------VKSPSRMLRSKAAGEE  197 (391)
T ss_pred             EEeeccc----cccCCcccccccchHHHHHHHHHHhhChhheeehhhcccc-------------ccChHHHHHhhhhhHH
Confidence            9999853    2333345667888899999999999999999999996632             3335678899999999


Q ss_pred             HHHHhhhcCCCcEEEEecccccc
Q 024488          230 IILDFSKNSDMAVMILRLVVFFT  252 (267)
Q Consensus       230 l~~~~a~e~g~~~~~vrp~~v~~  252 (267)
                      .++..-    ...+++||..||+
T Consensus       198 aVrdaf----PeAtIirPa~iyG  216 (391)
T KOG2865|consen  198 AVRDAF----PEATIIRPADIYG  216 (391)
T ss_pred             HHHhhC----Ccceeechhhhcc
Confidence            888743    3478999995544

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.47  E-value=5.9e-13  Score=111.44  Aligned_cols=149  Identities=22%  Similarity=0.282  Sum_probs=104.1

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEEc
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHF  152 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li~~  152 (267)
                      |+||||+|.+|+++++.|++.+++|.++.|..  .....+.++..     .++.+.+|+.|.+++.++++  ++|.||.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~--~~~~~~~l~~~-----g~~vv~~d~~~~~~l~~al~--g~d~v~~~   71 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDP--SSDRAQQLQAL-----GAEVVEADYDDPESLVAALK--GVDAVFSV   71 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSS--HHHHHHHHHHT-----TTEEEES-TT-HHHHHHHHT--TCSEEEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEecc--chhhhhhhhcc-----cceEeecccCCHHHHHHHHc--CCceEEee
Confidence            78999999999999999999999999999754  22222223322     46778999999999999999  89999988


Q ss_pred             cccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 024488          153 AAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIIL  232 (267)
Q Consensus       153 Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~  232 (267)
                      -+...            ........++++++++.+.++||+.|....+..        .....|....-..|...|..++
T Consensus        72 ~~~~~------------~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~--------~~~~~p~~~~~~~k~~ie~~l~  131 (233)
T PF05368_consen   72 TPPSH------------PSELEQQKNLIDAAKAAGVKHFVPSSFGADYDE--------SSGSEPEIPHFDQKAEIEEYLR  131 (233)
T ss_dssp             SSCSC------------CCHHHHHHHHHHHHHHHT-SEEEESEESSGTTT--------TTTSTTHHHHHHHHHHHHHHHH
T ss_pred             cCcch------------hhhhhhhhhHHHhhhccccceEEEEEecccccc--------cccccccchhhhhhhhhhhhhh
Confidence            76432            011334567889999999999997554444311        0112222334467888887776


Q ss_pred             HhhhcCCCcEEEEecccccccc
Q 024488          233 DFSKNSDMAVMILRLVVFFTLV  254 (267)
Q Consensus       233 ~~a~e~g~~~~~vrp~~v~~~~  254 (267)
                      .    .+++++++|||.++.++
T Consensus       132 ~----~~i~~t~i~~g~f~e~~  149 (233)
T PF05368_consen  132 E----SGIPYTIIRPGFFMENL  149 (233)
T ss_dssp             H----CTSEBEEEEE-EEHHHH
T ss_pred             h----ccccceeccccchhhhh
Confidence            6    59999999999777643

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.47  E-value=1.7e-12  Score=116.54  Aligned_cols=183  Identities=18%  Similarity=0.190  Sum_probs=125.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC---CeEEEEecCCCCCcchhhhhhhc---------CC----CCCceEEEEccCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS---YRVTIVDNLSRGNIGAVKVLQEL---------FP----EPGRLQFIYADLGD  133 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~---------~~----~~~~~~~~~~Dl~d  133 (267)
                      +|+|+|||||||+|.-+++.|++.-   -+++++-|..+..+. .+.++.+         .+    .-.++..+.+|+++
T Consensus        12 ~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~-~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~   90 (467)
T KOG1221|consen   12 NKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAA-QERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE   90 (467)
T ss_pred             CCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCH-HHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence            3999999999999999999998753   277777765444322 2212111         11    12467778899884


Q ss_pred             H------HHHHHHhhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEEeccccccCCC--
Q 024488          134 A------KAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPE--  204 (267)
Q Consensus       134 ~------~~v~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~iV~vSS~~~~g~~~--  204 (267)
                      +      .+.+.+.+  .+|+|||.|+...+   .+........|..|+++++..+++.. .+.+|++|++.+.-...  
T Consensus        91 ~~LGis~~D~~~l~~--eV~ivih~AAtvrF---de~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i  165 (467)
T KOG1221|consen   91 PDLGISESDLRTLAD--EVNIVIHSAATVRF---DEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHI  165 (467)
T ss_pred             cccCCChHHHHHHHh--cCCEEEEeeeeecc---chhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccc
Confidence            4      45555555  89999999997643   23334566789999999999998874 67899999977652111  


Q ss_pred             -CCCC--CC------------CC------------CCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecccccc-----
Q 024488          205 -KMPI--TE------------ET------------PQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFT-----  252 (267)
Q Consensus       205 -~~~~--~e------------~~------------~~~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~-----  252 (267)
                       ..++  .+            ..            -....+.|.-+|+.+|+++...+  .+++++++||+.|-+     
T Consensus       166 ~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~--~~lPivIiRPsiI~st~~EP  243 (467)
T KOG1221|consen  166 EEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA--ENLPLVIIRPSIITSTYKEP  243 (467)
T ss_pred             cccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc--cCCCeEEEcCCceeccccCC
Confidence             1111  11            00            01235679999999999999976  579999999998775     


Q ss_pred             ---ccceeecC
Q 024488          253 ---LVAFVIKI  260 (267)
Q Consensus       253 ---~~~~~~Gp  260 (267)
                         |..|.+||
T Consensus       244 ~pGWidn~~gp  254 (467)
T KOG1221|consen  244 FPGWIDNLNGP  254 (467)
T ss_pred             CCCccccCCCC
Confidence               55555555

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.45  E-value=2.2e-13  Score=110.42  Aligned_cols=166  Identities=22%  Similarity=0.253  Sum_probs=126.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC-CC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKD-SY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~-G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      ..+|||||+-|.+|..+|..|..+ |- +|++-+.... .+.+          -..-.++..|+.|...+++++-..++|
T Consensus        44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KP-p~~V----------~~~GPyIy~DILD~K~L~eIVVn~RId  112 (366)
T KOG2774|consen   44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKP-PANV----------TDVGPYIYLDILDQKSLEEIVVNKRID  112 (366)
T ss_pred             CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCC-chhh----------cccCCchhhhhhccccHHHhhcccccc
Confidence            478999999999999999998776 65 4554332111 1111          112346789999999999999888999


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCC-CCCCCCCCCCCCChHHHHHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEK-MPITEETPQAPINPYGKAKKM  226 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~-~~~~e~~~~~~~~~Y~~sK~a  226 (267)
                      .+||..+.... --+.+..-..+.|+.|..++++.+++++. ++...|+.+++|..+. .|..+-....|.+.||.||..
T Consensus       113 WL~HfSALLSA-vGE~NVpLA~~VNI~GvHNil~vAa~~kL-~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVH  190 (366)
T KOG2774|consen  113 WLVHFSALLSA-VGETNVPLALQVNIRGVHNILQVAAKHKL-KVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVH  190 (366)
T ss_pred             eeeeHHHHHHH-hcccCCceeeeecchhhhHHHHHHHHcCe-eEeecccccccCCCCCCCCCCCeeeecCceeechhHHH
Confidence            99998764211 12334445567899999999999999876 5666888999986554 344444566789999999999


Q ss_pred             HHHHHHHhhhcCCCcEEEEecc
Q 024488          227 AEDIILDFSKNSDMAVMILRLV  248 (267)
Q Consensus       227 ~e~l~~~~a~e~g~~~~~vrp~  248 (267)
                      +|.+.+.+...+|+++.++|++
T Consensus       191 AEL~GEy~~hrFg~dfr~~rfP  212 (366)
T KOG2774|consen  191 AELLGEYFNHRFGVDFRSMRFP  212 (366)
T ss_pred             HHHHHHHHHhhcCccceecccC
Confidence            9999999998899999999998

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.42  E-value=5e-12  Score=102.31  Aligned_cols=167  Identities=16%  Similarity=0.102  Sum_probs=118.4

Q ss_pred             CcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGas--ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +|++||+|-.  ..|+..||++|.++|+++..+...+    ++.+.++++.+.-+...+++||+++.+++++++++    
T Consensus         6 GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e----~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~   81 (259)
T COG0623           6 GKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE----RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK   81 (259)
T ss_pred             CceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH----HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence            4999999976  6899999999999999999998543    44444444433333456799999999999999987    


Q ss_pred             -CCCCEEEEccccCCcC----CCccChHHHHHHhHHH--------HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYVG----ESTLDPLKYYHNITSN--------TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~----~~~~~~~~~~~~~~~~--------~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                       +++|.|||+-+.....    .+.+.+.+-|..-...        .+.+.|.|.  +++.||..+=.+.-          
T Consensus        82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~--~ggSiltLtYlgs~----------  149 (259)
T COG0623          82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMN--NGGSILTLTYLGSE----------  149 (259)
T ss_pred             hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcC--CCCcEEEEEeccce----------
Confidence             7999999998875422    2223333333322222        223333332  25677776643221          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                       ...|.++.-|..|+++|.-++.++.+   .|+|++.|.-|.|.|.
T Consensus       150 -r~vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTL  194 (259)
T COG0623         150 -RVVPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTL  194 (259)
T ss_pred             -eecCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHH
Confidence             24566889999999999999999988   5799999988877763

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.28  E-value=2e-10  Score=98.02  Aligned_cols=142  Identities=20%  Similarity=0.263  Sum_probs=103.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      ++++||||||++|++++++|+++|++|++..|++....   .    ..   ..+++...|+.+.+++...++  ++|.++
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~---~----~~---~~v~~~~~d~~~~~~l~~a~~--G~~~~~   68 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAA---A----LA---GGVEVVLGDLRDPKSLVAGAK--GVDGVL   68 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHH---h----hc---CCcEEEEeccCCHhHHHHHhc--cccEEE
Confidence            47999999999999999999999999999997543221   1    11   478889999999999999998  889999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (267)
                      +..+... ...     ...........+...... .+..+++.+|+....             ......|..+|...|..
T Consensus        69 ~i~~~~~-~~~-----~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~-------------~~~~~~~~~~~~~~e~~  128 (275)
T COG0702          69 LISGLLD-GSD-----AFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGAD-------------AASPSALARAKAAVEAA  128 (275)
T ss_pred             EEecccc-ccc-----chhHHHHHHHHHHHHHhc-CCceEEEEeccCCCC-------------CCCccHHHHHHHHHHHH
Confidence            9887653 211     111122222233333332 335678888875553             12357899999999999


Q ss_pred             HHHhhhcCCCcEEEEecc
Q 024488          231 ILDFSKNSDMAVMILRLV  248 (267)
Q Consensus       231 ~~~~a~e~g~~~~~vrp~  248 (267)
                      +.+    .|+..+++|+.
T Consensus       129 l~~----sg~~~t~lr~~  142 (275)
T COG0702         129 LRS----SGIPYTTLRRA  142 (275)
T ss_pred             HHh----cCCCeEEEecC
Confidence            998    89998999966

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.26  E-value=3.5e-10  Score=88.71  Aligned_cols=162  Identities=14%  Similarity=0.139  Sum_probs=112.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+|.|.||||-+|+++++++.++||+|+++.|++.+...           ...+..++.|+.|++++.+.+.  +.|+||
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~-----------~~~~~i~q~Difd~~~~a~~l~--g~DaVI   67 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAA-----------RQGVTILQKDIFDLTSLASDLA--GHDAVI   67 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccc-----------cccceeecccccChhhhHhhhc--CCceEE
Confidence            467788999999999999999999999999976533211           1356778999999999988888  889999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEecccccc-CCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG-EPEKMPITEETPQAPINPYGKAKKMAED  229 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g-~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (267)
                      ..-+...+.     .++.   .......++..+...+..|++.++-.+..- ..+  -.-.+.|..|..-|...+..+|.
T Consensus        68 sA~~~~~~~-----~~~~---~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g--~rLvD~p~fP~ey~~~A~~~ae~  137 (211)
T COG2910          68 SAFGAGASD-----NDEL---HSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEG--TRLVDTPDFPAEYKPEALAQAEF  137 (211)
T ss_pred             EeccCCCCC-----hhHH---HHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCC--ceeecCCCCchhHHHHHHHHHHH
Confidence            987654221     1111   122355677777777888998887755432 111  11122344455556666666654


Q ss_pred             HHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          230 IILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       230 l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                       +..+..+..++|+-+.|.       -.|-||+.
T Consensus       138 -L~~Lr~~~~l~WTfvSPa-------a~f~PGer  163 (211)
T COG2910         138 -LDSLRAEKSLDWTFVSPA-------AFFEPGER  163 (211)
T ss_pred             -HHHHhhccCcceEEeCcH-------HhcCCccc
Confidence             556666667999999999       77777643

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.23  E-value=1.5e-10  Score=100.96  Aligned_cols=177  Identities=14%  Similarity=0.080  Sum_probs=120.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCC
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENA  145 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (267)
                      ..|++|.|||++|.||..++..|+.++  .+++++|+.  ..+.....+...   ..  .....+.+|++++.+.++  +
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~---~~--~~~v~~~td~~~~~~~l~--g   76 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHI---DT--PAKVTGYADGELWEKALR--G   76 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhc---Cc--CceEEEecCCCchHHHhC--C
Confidence            446899999999999999999998655  689999971  111111111111   11  223345666555445555  7


Q ss_pred             CCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCC--CCCCCCCCCCCCChHHHH
Q 024488          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEK--MPITEETPQAPINPYGKA  223 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~--~~~~e~~~~~~~~~Y~~s  223 (267)
                      .|+||++||....  ...+..+.+..|...++.+++.|.+.+..++|+++|.-+-....-  ..+.+....++...||.+
T Consensus        77 aDvVVitaG~~~~--~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g  154 (321)
T PTZ00325         77 ADLVLICAGVPRK--PGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVT  154 (321)
T ss_pred             CCEEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeech
Confidence            8999999997532  234567788999999999999999999999999999655321100  012244566778888887


Q ss_pred             HHHHHHHHHHhhhcCCCcEEEEeccccccccce
Q 024488          224 KKMAEDIILDFSKNSDMAVMILRLVVFFTLVAF  256 (267)
Q Consensus       224 K~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~  256 (267)
                      -.-.-.|-..+++..++....|+ +.|+++|..
T Consensus       155 ~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        155 TLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             hHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence            55555667777888888887777 766666654

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.17  E-value=9.2e-10  Score=97.63  Aligned_cols=164  Identities=21%  Similarity=0.157  Sum_probs=104.5

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH-HHHHHHhhcC-
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSEN-  144 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~-  144 (267)
                      ...+.+|+|+||+|.+|+-+++.|.++|+.|.++.|.....++...    .........-+..|.... +....++... 
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~----~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~  151 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG----VFFVDLGLQNVEADVVTAIDILKKLVEAVP  151 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc----ccccccccceeeeccccccchhhhhhhhcc
Confidence            3445899999999999999999999999999999865444333322    001111233344444433 3334444431 


Q ss_pred             -CCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCC-----
Q 024488          145 -AFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN-----  218 (267)
Q Consensus       145 -~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~-----  218 (267)
                       ...+++-++|-...  .+ +...-+..-..++++++++|...+.+|+|++||...-.           ...+.+     
T Consensus       152 ~~~~~v~~~~ggrp~--~e-d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~-----------~~~~~~~~~~~  217 (411)
T KOG1203|consen  152 KGVVIVIKGAGGRPE--EE-DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTK-----------FNQPPNILLLN  217 (411)
T ss_pred             ccceeEEecccCCCC--cc-cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcc-----------cCCCchhhhhh
Confidence             24566666653221  11 11112334567899999999999999999999866542           222222     


Q ss_pred             -hHHHHHHHHHHHHHHhhhcCCCcEEEEecccccc
Q 024488          219 -PYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFT  252 (267)
Q Consensus       219 -~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~  252 (267)
                       .+..+|..+|.+.+.    .|++.++|||+....
T Consensus       218 ~~~~~~k~~~e~~~~~----Sgl~ytiIR~g~~~~  248 (411)
T KOG1203|consen  218 GLVLKAKLKAEKFLQD----SGLPYTIIRPGGLEQ  248 (411)
T ss_pred             hhhhHHHHhHHHHHHh----cCCCcEEEecccccc
Confidence             334677777777664    899999999995443

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.11  E-value=7.5e-10  Score=88.71  Aligned_cols=102  Identities=19%  Similarity=0.248  Sum_probs=74.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+++||||||++| .+++.|+++|++|++++|+.   ++..+....+. ....+.++.+|++|.+++.++++.     ++
T Consensus         1 m~vlVtGGtG~gg-~la~~L~~~G~~V~v~~R~~---~~~~~l~~~l~-~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~   75 (177)
T PRK08309          1 MHALVIGGTGMLK-RVSLWLCEKGFHVSVIARRE---VKLENVKREST-TPESITPLPLDYHDDDALKLAIKSTIEKNGP   75 (177)
T ss_pred             CEEEEECcCHHHH-HHHHHHHHCcCEEEEEECCH---HHHHHHHHHhh-cCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4799999996554 59999999999999998643   23322222232 234788899999999999988875     67


Q ss_pred             CCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCC----EEEEEe
Q 024488          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD----TLIYSS  195 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~iV~vS  195 (267)
                      +|++|+.+-.                  .+..++...+.+.+.+    ++|++=
T Consensus        76 id~lv~~vh~------------------~~~~~~~~~~~~~gv~~~~~~~~h~~  111 (177)
T PRK08309         76 FDLAVAWIHS------------------SAKDALSVVCRELDGSSETYRLFHVL  111 (177)
T ss_pred             CeEEEEeccc------------------cchhhHHHHHHHHccCCCCceEEEEe
Confidence            8999977632                  2456677788888777    888843

>PLN00106 malate dehydrogenase

Probab=99.07  E-value=1.8e-09  Score=94.33  Aligned_cols=166  Identities=12%  Similarity=0.086  Sum_probs=114.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      ++|.|||++|.||..++..|+..+.  +++++|...  .+.....+...   ....  ...|+++.+++.+.++  +.|+
T Consensus        19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~---~~~~--~i~~~~~~~d~~~~l~--~aDi   89 (323)
T PLN00106         19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHI---NTPA--QVRGFLGDDQLGDALK--GADL   89 (323)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhC---CcCc--eEEEEeCCCCHHHHcC--CCCE
Confidence            7899999999999999999997664  899999644  11111111111   1111  2234434444566666  8999


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCC--CCCCCCCCCCCCCCChHHHHHHH
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP--EKMPITEETPQAPINPYGKAKKM  226 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~--~~~~~~e~~~~~~~~~Y~~sK~a  226 (267)
                      ||+.||....+  ....++.+..|...++.+.+.+.+.+...+|+++|.-+-+..  -...+......++...||.++.-
T Consensus        90 VVitAG~~~~~--g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LD  167 (323)
T PLN00106         90 VIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLD  167 (323)
T ss_pred             EEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecch
Confidence            99999985432  345678889999999999999999998888888883321000  00011233456778899999988


Q ss_pred             HHHHHHHhhhcCCCcEEEEec
Q 024488          227 AEDIILDFSKNSDMAVMILRL  247 (267)
Q Consensus       227 ~e~l~~~~a~e~g~~~~~vrp  247 (267)
                      .+.+-..++++.++....|+-
T Consensus       168 s~Rl~~~lA~~lgv~~~~V~~  188 (323)
T PLN00106        168 VVRANTFVAEKKGLDPADVDV  188 (323)
T ss_pred             HHHHHHHHHHHhCCChhheEE
Confidence            889999999999988776643

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.06  E-value=2.5e-09  Score=83.44  Aligned_cols=150  Identities=13%  Similarity=0.120  Sum_probs=111.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      ++.++|.||||-.|..+.+++++.+-  +|+++.|......          +....+....+|....+++...++  ++|
T Consensus        18 ~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~----------at~k~v~q~~vDf~Kl~~~a~~~q--g~d   85 (238)
T KOG4039|consen   18 NMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDP----------ATDKVVAQVEVDFSKLSQLATNEQ--GPD   85 (238)
T ss_pred             ccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCc----------cccceeeeEEechHHHHHHHhhhc--CCc
Confidence            48899999999999999999999984  8999887432211          113356667788877777777666  899


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (267)
                      +++.+-|.+....-   .+.++..-.+-+..+.+++++.+.+.||.+||.+.-             ....-.|-..|..+
T Consensus        86 V~FcaLgTTRgkaG---adgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd-------------~sSrFlY~k~KGEv  149 (238)
T KOG4039|consen   86 VLFCALGTTRGKAG---ADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGAD-------------PSSRFLYMKMKGEV  149 (238)
T ss_pred             eEEEeecccccccc---cCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCC-------------cccceeeeeccchh
Confidence            99999987644322   344455555667778888899999999999997763             12244688889999


Q ss_pred             HHHHHHhhhcCCC-cEEEEeccccc
Q 024488          228 EDIILDFSKNSDM-AVMILRLVVFF  251 (267)
Q Consensus       228 e~l~~~~a~e~g~-~~~~vrp~~v~  251 (267)
                      |.=+..+    ++ +++++|||.+.
T Consensus       150 E~~v~eL----~F~~~~i~RPG~ll  170 (238)
T KOG4039|consen  150 ERDVIEL----DFKHIIILRPGPLL  170 (238)
T ss_pred             hhhhhhc----cccEEEEecCccee
Confidence            8877664    44 58999999444

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.90  E-value=3.3e-09  Score=88.42  Aligned_cols=85  Identities=16%  Similarity=0.212  Sum_probs=59.0

Q ss_pred             cEEEEEcC-CChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           71 THVLVTGG-AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        71 k~vlVTGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      .+=.||.. |||||+++|++|+++|++|+++++..    .    +...   .    ...+|+.+.++++++++.     +
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~----~----l~~~---~----~~~~Dv~d~~s~~~l~~~v~~~~g   79 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKR----A----LKPE---P----HPNLSIREIETTKDLLITLKELVQ   79 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChh----h----cccc---c----CCcceeecHHHHHHHHHHHHHHcC
Confidence            45567766 78999999999999999999987411    0    0000   0    135799998888877654     6


Q ss_pred             CCCEEEEccccCCcCCCccChHHHHH
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLKYYH  170 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~~~~  170 (267)
                      ++|+||||||+....+..+.+.+.|+
T Consensus        80 ~iDiLVnnAgv~d~~~~~~~s~e~~~  105 (227)
T TIGR02114        80 EHDILIHSMAVSDYTPVYMTDLEQVQ  105 (227)
T ss_pred             CCCEEEECCEeccccchhhCCHHHHh
Confidence            79999999998655444444444444

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.77  E-value=3.6e-08  Score=88.59  Aligned_cols=76  Identities=24%  Similarity=0.201  Sum_probs=59.4

Q ss_pred             CcEEEEEcC----------------CChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC
Q 024488           70 VTHVLVTGG----------------AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD  133 (267)
Q Consensus        70 ~k~vlVTGa----------------sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d  133 (267)
                      +|+|+||||                ||++|.++|++|+++|++|+++++...    . +    .   +..  ...+|+++
T Consensus       188 gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~----~-~----~---~~~--~~~~dv~~  253 (399)
T PRK05579        188 GKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN----L-P----T---PAG--VKRIDVES  253 (399)
T ss_pred             CCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc----c-c----C---CCC--cEEEccCC
Confidence            399999999                777999999999999999999985321    1 0    0   111  34679999


Q ss_pred             HHHHHHHhhc--CCCCEEEEccccCCcC
Q 024488          134 AKAVNKFFSE--NAFDAVMHFAAVAYVG  159 (267)
Q Consensus       134 ~~~v~~~~~~--~~~D~li~~Ag~~~~~  159 (267)
                      .+++.+++.+  +++|++|||||+....
T Consensus       254 ~~~~~~~v~~~~~~~DilI~~Aav~d~~  281 (399)
T PRK05579        254 AQEMLDAVLAALPQADIFIMAAAVADYR  281 (399)
T ss_pred             HHHHHHHHHHhcCCCCEEEEcccccccc
Confidence            9998888865  6799999999986443

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.75  E-value=4.5e-08  Score=81.72  Aligned_cols=76  Identities=20%  Similarity=0.187  Sum_probs=49.7

Q ss_pred             cEEEEEcC-CChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC--HHHHHHHhhcCCCC
Q 024488           71 THVLVTGG-AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~D  147 (267)
                      .+-.||+. ||+||+++|++|+++|++|+++++....        ...  ....+.++.++..+  .+.+.+.+.  ++|
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~--------~~~--~~~~v~~i~v~s~~~m~~~l~~~~~--~~D   83 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAV--------KPE--PHPNLSIIEIENVDDLLETLEPLVK--DHD   83 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccc--------cCC--CCCCeEEEEEecHHHHHHHHHHHhc--CCC
Confidence            45667755 5679999999999999999999853211        000  11245666654322  234444444  789


Q ss_pred             EEEEccccCCc
Q 024488          148 AVMHFAAVAYV  158 (267)
Q Consensus       148 ~li~~Ag~~~~  158 (267)
                      +||||||+...
T Consensus        84 ivIh~AAvsd~   94 (229)
T PRK06732         84 VLIHSMAVSDY   94 (229)
T ss_pred             EEEeCCccCCc
Confidence            99999998653

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.73  E-value=1.3e-07  Score=82.92  Aligned_cols=118  Identities=14%  Similarity=0.075  Sum_probs=77.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC-------CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS-------YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE  143 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~  143 (267)
                      .+|+||||+|+||.+++..|+..+       .+|+++++... .+.+.....++..   -......|+....++.+.++ 
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~-~~~~~g~~~Dl~d---~~~~~~~~~~~~~~~~~~l~-   77 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPA-LKALEGVVMELQD---CAFPLLKSVVATTDPEEAFK-   77 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCc-cccccceeeehhh---ccccccCCceecCCHHHHhC-
Confidence            579999999999999999999854       58999997432 1111111111100   00011224443455555565 


Q ss_pred             CCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC--CCEEEEEec
Q 024488          144 NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG--VDTLIYSST  196 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~iV~vSS  196 (267)
                       +.|+|||+||....  ...+..+.++.|....+.+.+.+.+..  ...+|.+|.
T Consensus        78 -~aDiVI~tAG~~~~--~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          78 -DVDVAILVGAMPRK--EGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             -CCCEEEEeCCcCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence             89999999998533  234568889999999999999998884  345555664

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09620 hypothetical protein; Provisional

Probab=98.71  E-value=5.6e-08  Score=80.97  Aligned_cols=83  Identities=19%  Similarity=0.171  Sum_probs=56.6

Q ss_pred             CcEEEEEcCC----------------ChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC
Q 024488           70 VTHVLVTGGA----------------GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD  133 (267)
Q Consensus        70 ~k~vlVTGas----------------ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d  133 (267)
                      +|+||||+|.                |++|+++|++|+++|++|++++........      .. ........+..|...
T Consensus         3 gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~------~~-~~~~~~~~V~s~~d~   75 (229)
T PRK09620          3 GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN------DI-NNQLELHPFEGIIDL   75 (229)
T ss_pred             CCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc------cc-CCceeEEEEecHHHH
Confidence            3899999886                999999999999999999998853221100      00 001123345554334


Q ss_pred             HHHHHHHhhcCCCCEEEEccccCCcC
Q 024488          134 AKAVNKFFSENAFDAVMHFAAVAYVG  159 (267)
Q Consensus       134 ~~~v~~~~~~~~~D~li~~Ag~~~~~  159 (267)
                      .+.+.+++...++|+|||+|++....
T Consensus        76 ~~~l~~~~~~~~~D~VIH~AAvsD~~  101 (229)
T PRK09620         76 QDKMKSIITHEKVDAVIMAAAGSDWV  101 (229)
T ss_pred             HHHHHHHhcccCCCEEEECcccccee
Confidence            46777777655789999999986443

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.70  E-value=6.7e-08  Score=83.58  Aligned_cols=85  Identities=15%  Similarity=0.113  Sum_probs=61.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +|+++|||| ||+|++++..|++.|++ |++++|+....+++.+..+++......+.+..+|+.+.+++++.++  ..|+
T Consensus       126 ~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~--~~Di  202 (289)
T PRK12548        126 GKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA--SSDI  202 (289)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc--cCCE
Confidence            389999998 79999999999999986 9999975421233444334443223345566789988888887776  6799


Q ss_pred             EEEccccCC
Q 024488          149 VMHFAAVAY  157 (267)
Q Consensus       149 li~~Ag~~~  157 (267)
                      |||+-.+..
T Consensus       203 lINaTp~Gm  211 (289)
T PRK12548        203 LVNATLVGM  211 (289)
T ss_pred             EEEeCCCCC
Confidence            999876543

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.67  E-value=2.7e-07  Score=80.83  Aligned_cols=165  Identities=13%  Similarity=0.074  Sum_probs=109.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-------eEEEEecCCCC--CcchhhhhhhcC-CCCCceEEEEccCCCHHHHHHH
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRG--NIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKF  140 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~  140 (267)
                      ++|.|+|++|.+|..++..|+..|.       +++++|.....  .+.....+.... .....+.+ .  -.+.+++   
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~--~~~~~~~---   76 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-T--DDPNVAF---   76 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-e--cCcHHHh---
Confidence            6899999999999999999998875       79999863221  111111122111 11112221 1  1233333   


Q ss_pred             hhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC--CCEEEEEeccc---cccCCCCCCCCCCCC-C
Q 024488          141 FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG--VDTLIYSSTCA---TYGEPEKMPITEETP-Q  214 (267)
Q Consensus       141 ~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~iV~vSS~~---~~g~~~~~~~~e~~~-~  214 (267)
                       +  +.|+||..||....  ...+..+.+..|....+.+.+.+.+..  ...+|.+|--.   +|-      .....+ .
T Consensus        77 -~--daDivvitaG~~~k--~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~------~~k~sg~~  145 (322)
T cd01338          77 -K--DADWALLVGAKPRG--PGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALI------AMKNAPDI  145 (322)
T ss_pred             -C--CCCEEEEeCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHH------HHHHcCCC
Confidence             2  78999999997532  245667889999999999999998887  34555555311   110      011122 5


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFT  252 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~  252 (267)
                      ++...||.++...+.+...+++.++++...+|...|++
T Consensus       146 p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~G  183 (322)
T cd01338         146 PPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWG  183 (322)
T ss_pred             ChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEe
Confidence            66778999999999999999999999999999883333

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=98.64  E-value=1.4e-07  Score=76.67  Aligned_cols=159  Identities=18%  Similarity=0.145  Sum_probs=108.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      .+.++.|+.++.|.++++...+.|+.|.++.++.+.     +.++..   .+.+.++.+|.-..+-.+....  ++..++
T Consensus        53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k-----~~l~sw---~~~vswh~gnsfssn~~k~~l~--g~t~v~  122 (283)
T KOG4288|consen   53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENK-----QTLSSW---PTYVSWHRGNSFSSNPNKLKLS--GPTFVY  122 (283)
T ss_pred             HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCc-----chhhCC---CcccchhhccccccCcchhhhc--CCcccH
Confidence            578999999999999999999999999999875442     112222   3456666777654443333333  566677


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (267)
                      -++|...      +.......|-..+.+...+..+.+.++++++|.... |          .+.--..-|-.+|.++|.-
T Consensus       123 e~~ggfg------n~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~-~----------~~~~i~rGY~~gKR~AE~E  185 (283)
T KOG4288|consen  123 EMMGGFG------NIILMDRINGTANINAVKAAAKAGVPRFVYISAHDF-G----------LPPLIPRGYIEGKREAEAE  185 (283)
T ss_pred             HHhcCcc------chHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhc-C----------CCCccchhhhccchHHHHH
Confidence            6665421      223445566667788888999999999999997432 1          1111233699999999975


Q ss_pred             HHHhhhcCCCcEEEEeccccccccceeecC
Q 024488          231 ILDFSKNSDMAVMILRLVVFFTLVAFVIKI  260 (267)
Q Consensus       231 ~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp  260 (267)
                      +...   ++.+-+++|||++|+. -++.|+
T Consensus       186 ll~~---~~~rgiilRPGFiyg~-R~v~g~  211 (283)
T KOG4288|consen  186 LLKK---FRFRGIILRPGFIYGT-RNVGGI  211 (283)
T ss_pred             HHHh---cCCCceeeccceeecc-cccCcc
Confidence            5553   6789999999966665 344443

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.62  E-value=3.3e-07  Score=81.36  Aligned_cols=77  Identities=26%  Similarity=0.421  Sum_probs=62.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      |++|||.|+ |+||+.+|..|+++| .+|++.+|+..+   ..+.....   ..+++.+++|+.|.+.+.++++  +.|+
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~---~~~i~~~~---~~~v~~~~vD~~d~~al~~li~--~~d~   71 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEK---CARIAELI---GGKVEALQVDAADVDALVALIK--DFDL   71 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHH---HHHHHhhc---cccceeEEecccChHHHHHHHh--cCCE
Confidence            588999997 999999999999999 899999975433   22222211   3478999999999999999999  5699


Q ss_pred             EEEcccc
Q 024488          149 VMHFAAV  155 (267)
Q Consensus       149 li~~Ag~  155 (267)
                      |||++..
T Consensus        72 VIn~~p~   78 (389)
T COG1748          72 VINAAPP   78 (389)
T ss_pred             EEEeCCc
Confidence            9999864

>PRK05086 malate dehydrogenase; Provisional

Probab=98.58  E-value=1.9e-06  Score=75.22  Aligned_cols=170  Identities=16%  Similarity=0.033  Sum_probs=98.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHh---CCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLK---DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~---~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      |+++|.||+|+||++++..|..   .+++++++++++. .+.   ...++. +......+.+  .+.+++.+.++  +.|
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g---~alDl~-~~~~~~~i~~--~~~~d~~~~l~--~~D   71 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPG---VAVDLS-HIPTAVKIKG--FSGEDPTPALE--GAD   71 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-Ccc---eehhhh-cCCCCceEEE--eCCCCHHHHcC--CCC
Confidence            5789999999999999988854   3568888886432 111   001111 1111112222  11223333444  689


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEecccc----ccCCCCCCCCCCCCCCCCChHHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCAT----YGEPEKMPITEETPQAPINPYGKA  223 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~----~g~~~~~~~~e~~~~~~~~~Y~~s  223 (267)
                      +||.++|....  ...+..+.+..|......+++.|.+.+..++|.+.|.=+    |--..  .+......++....|.+
T Consensus        72 iVIitaG~~~~--~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~D~~t~~~~~--~~~~~sg~p~~rvig~~  147 (312)
T PRK05086         72 VVLISAGVARK--PGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPVNTTVAIAAE--VLKKAGVYDKNKLFGVT  147 (312)
T ss_pred             EEEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchHHHHHHHHH--HHHHhcCCCHHHEEeee
Confidence            99999997543  234567888999999999999999999888888888322    10000  00000011111122222


Q ss_pred             HHHHHHHHHHhhhcCCCcEEEEecccccccc
Q 024488          224 KKMAEDIILDFSKNSDMAVMILRLVVFFTLV  254 (267)
Q Consensus       224 K~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~  254 (267)
                      -.-.-.+...+++..+++..-|+ +.|+++|
T Consensus       148 ~Lds~R~~~~ia~~l~~~~~~v~-~~v~GeH  177 (312)
T PRK05086        148 TLDVIRSETFVAELKGKQPGEVE-VPVIGGH  177 (312)
T ss_pred             cHHHHHHHHHHHHHhCCChhheE-EEEEEec
Confidence            22334566666777788777776 6566666

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.51  E-value=3.5e-07  Score=81.92  Aligned_cols=106  Identities=18%  Similarity=0.126  Sum_probs=69.5

Q ss_pred             CcEEEEEcC---------------CCh-hHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC
Q 024488           70 VTHVLVTGG---------------AGY-IGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD  133 (267)
Q Consensus        70 ~k~vlVTGa---------------sgg-IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d  133 (267)
                      +|+|+||||               |+| +|.++|++|..+|++|+++.+.....            .+..+  ..+|+++
T Consensus       185 ~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~------------~~~~~--~~~~v~~  250 (390)
T TIGR00521       185 GKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL------------TPPGV--KSIKVST  250 (390)
T ss_pred             CceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC------------CCCCc--EEEEecc
Confidence            399999999               445 99999999999999999987432110            11122  4689999


Q ss_pred             HHHH-HHHhhc--CCCCEEEEccccCCcCCCccCh------HHHHHHhHHHHHHHHHHHHHcCCC
Q 024488          134 AKAV-NKFFSE--NAFDAVMHFAAVAYVGESTLDP------LKYYHNITSNTLVVLESMARHGVD  189 (267)
Q Consensus       134 ~~~v-~~~~~~--~~~D~li~~Ag~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~  189 (267)
                      .+++ +++++.  +++|++|||||+....+.+...      .+.+..+..-+..++..+.+...+
T Consensus       251 ~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~~~  315 (390)
T TIGR00521       251 AEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIKKH  315 (390)
T ss_pred             HHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhCCC
Confidence            9888 555533  5789999999997543321111      111222333366678877765433

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.51  E-value=4.6e-07  Score=73.75  Aligned_cols=79  Identities=24%  Similarity=0.201  Sum_probs=59.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      ++++|+||+|++|+.+++.|++.|++|++++|+.   +++.+..+++.. ........+|..+.+++.++++  +.|+||
T Consensus        29 ~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~---~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~--~~diVi  102 (194)
T cd01078          29 KTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDL---ERAQKAADSLRA-RFGEGVGAVETSDDAARAAAIK--GADVVF  102 (194)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH---HHHHHHHHHHHh-hcCCcEEEeeCCCHHHHHHHHh--cCCEEE
Confidence            8999999999999999999999999999998643   333333332211 1134456678889999888887  789999


Q ss_pred             Ecccc
Q 024488          151 HFAAV  155 (267)
Q Consensus       151 ~~Ag~  155 (267)
                      ++...
T Consensus       103 ~at~~  107 (194)
T cd01078         103 AAGAA  107 (194)
T ss_pred             ECCCC
Confidence            97654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.47  E-value=5e-06  Score=76.50  Aligned_cols=169  Identities=15%  Similarity=0.118  Sum_probs=112.7

Q ss_pred             CcEEEEEcCC-ChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhh----cCCCCCceEEEEccCCCHHHHHHHhhc-
Q 024488           70 VTHVLVTGGA-GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQE----LFPEPGRLQFIYADLGDAKAVNKFFSE-  143 (267)
Q Consensus        70 ~k~vlVTGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~~~Dl~d~~~v~~~~~~-  143 (267)
                      .+.+|||||+ |-||.+++..|++.|++|+++.-+-  .++..+..+.    ....+..+.++..+..+..+++.+++- 
T Consensus       396 d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~--s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewI  473 (866)
T COG4982         396 DKVALVTGASKGSIAAAVVARLLAGGATVIATTSRL--SEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWI  473 (866)
T ss_pred             cceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccc--cHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHh
Confidence            3999999998 7899999999999999999987311  1122222233    223355677888999999999888863 


Q ss_pred             ------------------CCCCEEEEccccCCcCCCc---cChHHHHHHhHHHHHHHHHHHHHcCC-------CEEEEEe
Q 024488          144 ------------------NAFDAVMHFAAVAYVGEST---LDPLKYYHNITSNTLVVLESMARHGV-------DTLIYSS  195 (267)
Q Consensus       144 ------------------~~~D~li~~Ag~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~iV~vS  195 (267)
                                        ..+|.+|-.|++...+...   ...+-..+.+..+.++++-.+++.+.       -++|...
T Consensus       474 g~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPg  553 (866)
T COG4982         474 GDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPG  553 (866)
T ss_pred             ccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecC
Confidence                              2478899988875443321   22233445566667777777766542       2466666


Q ss_pred             ccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhcC----CCcEEEEecccccc
Q 024488          196 TCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS----DMAVMILRLVVFFT  252 (267)
Q Consensus       196 S~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e~----g~~~~~vrp~~v~~  252 (267)
                      |-..-            -+.....|+.+|.+.+.++..|..|.    .+.++..+.||+.+
T Consensus       554 SPNrG------------~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrG  602 (866)
T COG4982         554 SPNRG------------MFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRG  602 (866)
T ss_pred             CCCCC------------ccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeecc
Confidence            62110            12235689999999999999998874    24556666675443

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.41  E-value=6.8e-06  Score=72.09  Aligned_cols=159  Identities=13%  Similarity=0.100  Sum_probs=91.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-------eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHH---------
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---------  135 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---------  135 (267)
                      +|.|+|++|.+|..++..|+..|.       +++++|+.+... .              .+....|+.|..         
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-~--------------a~g~~~Dl~d~~~~~~~~~~~   65 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-V--------------LEGVVMELMDCAFPLLDGVVP   65 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-c--------------cceeEeehhcccchhcCceec
Confidence            588999999999999999998553       599988643211 0              111222332222         


Q ss_pred             --HHHHHhhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC-C-CEEEEEeccc---cccCCCCCCC
Q 024488          136 --AVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-V-DTLIYSSTCA---TYGEPEKMPI  208 (267)
Q Consensus       136 --~v~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~-~~iV~vSS~~---~~g~~~~~~~  208 (267)
                        +..+.++  +.|+||+.||....  ..++..+.+..|....+.+.+.+.+.. . +.||.+|--.   .|-      .
T Consensus        66 ~~~~~~~~~--~aDiVVitAG~~~~--~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v------~  135 (324)
T TIGR01758        66 THDPAVAFT--DVDVAILVGAFPRK--EGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALV------L  135 (324)
T ss_pred             cCChHHHhC--CCCEEEEcCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHH------H
Confidence              1123333  78999999997533  234567888999999999999999883 4 4555555311   010      0


Q ss_pred             CCCC-CCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccc
Q 024488          209 TEET-PQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       209 ~e~~-~~~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~  255 (267)
                      .+.. ..++...=+.+..-.-.+-..+++..+++...++-..|+++|.
T Consensus       136 ~~~sg~~~~~vig~gt~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG  183 (324)
T TIGR01758       136 SNYAPSIPPKNFSALTRLDHNRALAQVAERAGVPVSDVKNVIIWGNHS  183 (324)
T ss_pred             HHHcCCCCcceEEEeeehHHHHHHHHHHHHhCCChhhceEeEEEECCC
Confidence            0000 0111111111222333444555666777766666665666554

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=98.33  E-value=0.00012  Score=56.75  Aligned_cols=157  Identities=17%  Similarity=0.174  Sum_probs=92.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHH---H----HHHHhhc
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---A----VNKFFSE  143 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~----v~~~~~~  143 (267)
                      .+|+|-||-|-+|+++++.|.+++|-|.-++-.+...             .+.-..+..|-.=-+   +    +.+.++.
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~-------------Ad~sI~V~~~~swtEQe~~v~~~vg~sL~g   70 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ-------------ADSSILVDGNKSWTEQEQSVLEQVGSSLQG   70 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc-------------ccceEEecCCcchhHHHHHHHHHHHHhhcc
Confidence            5899999999999999999999999998888533211             011223333332112   2    2223333


Q ss_pred             CCCCEEEEccccCCcCC-----CccChHHHHHHhHHHHHHHHHHHHHc--C-CCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGE-----STLDPLKYYHNITSNTLVVLESMARH--G-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~--~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      .++|.|+.-||--..+.     ...+.+-.|.+-+.. -.+...+...  + ++-+-..+..+..+           +.+
T Consensus        71 ekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwt-SaIsa~lAt~HLK~GGLL~LtGAkaAl~-----------gTP  138 (236)
T KOG4022|consen   71 EKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWT-SAISAKLATTHLKPGGLLQLTGAKAALG-----------GTP  138 (236)
T ss_pred             cccceEEEeeccccCCCcchhhhhhchhhHHHHHHHH-HHHHHHHHHhccCCCceeeecccccccC-----------CCC
Confidence            68999999998643222     222333333333322 1222222221  2 33444455555553           567


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc-CCCc----EEEEecccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN-SDMA----VMILRLVVFFT  252 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e-~g~~----~~~vrp~~v~~  252 (267)
                      .+--|+..|+++.+++++++.+ .|++    .+.|-|-.+-+
T Consensus       139 gMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDT  180 (236)
T KOG4022|consen  139 GMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDT  180 (236)
T ss_pred             cccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccC
Confidence            7889999999999999999877 4443    45555654443

>cd00704 MDH Malate dehydrogenase

Probab=98.31  E-value=1.3e-05  Score=70.39  Aligned_cols=113  Identities=17%  Similarity=0.192  Sum_probs=71.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-------eEEEEecCC--CCCcchhhhhhhcC-CCCCceEEEEccCCCHHHHHHHh
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLS--RGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFF  141 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~  141 (267)
                      +|.||||+|.+|..++..|+..|.       +++++|+..  ...+.....+.... ......     .++  ....+.+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~-----~i~--~~~~~~~   74 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGV-----VIT--TDPEEAF   74 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCc-----EEe--cChHHHh
Confidence            689999999999999999998653       599998643  11111111111110 000011     111  1223344


Q ss_pred             hcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC-CC-EEEEEe
Q 024488          142 SENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VD-TLIYSS  195 (267)
Q Consensus       142 ~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~-~iV~vS  195 (267)
                      +  +.|+||+.||....  ..++..+.+..|....+.+.+.+.+.. .. .+|.+|
T Consensus        75 ~--~aDiVVitAG~~~~--~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          75 K--DVDVAILVGAFPRK--PGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             C--CCCEEEEeCCCCCC--cCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            4  78999999997532  345677888999999999999999883 44 455554

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.30  E-value=3.2e-06  Score=76.18  Aligned_cols=76  Identities=25%  Similarity=0.406  Sum_probs=56.2

Q ss_pred             EEEEcCCChhHHHHHHHHHhCC-C-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           73 VLVTGGAGYIGSHAALRLLKDS-Y-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+|.|| |++|+.+++.|++.+ . +|++.+|+.   +++.+..++.  ...++.++++|+.|.+++.++++  +.|+||
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~---~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~--~~dvVi   72 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNP---EKAERLAEKL--LGDRVEAVQVDVNDPESLAELLR--GCDVVI   72 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSH---HHHHHHHT----TTTTEEEEE--TTTHHHHHHHHT--TSSEEE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCH---HHHHHHHhhc--cccceeEEEEecCCHHHHHHHHh--cCCEEE
Confidence            689999 999999999999997 4 899999644   3333333332  35689999999999999999998  679999


Q ss_pred             EccccC
Q 024488          151 HFAAVA  156 (267)
Q Consensus       151 ~~Ag~~  156 (267)
                      |+++..
T Consensus        73 n~~gp~   78 (386)
T PF03435_consen   73 NCAGPF   78 (386)
T ss_dssp             E-SSGG
T ss_pred             ECCccc
Confidence            999864

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=98.23  E-value=5.7e-05  Score=65.95  Aligned_cols=114  Identities=18%  Similarity=0.258  Sum_probs=76.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCC-CCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      ++|.|.|+ |++|+.++..|+..|  ++|+++++.....+.....+.+... .+...... .  .+.+++    +  +.|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~~l----~--~aD   70 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYSDC----K--DAD   70 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHHHh----C--CCC
Confidence            36888895 999999999999999  5899999765444444333333221 11222222 1  233332    3  789


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEEec
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~vSS  196 (267)
                      ++|+++|....  ..++..+.+..|....+.+.+.+.+.+.. .|+.+|-
T Consensus        71 IVIitag~~~~--~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsN  118 (306)
T cd05291          71 IVVITAGAPQK--PGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASN  118 (306)
T ss_pred             EEEEccCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            99999997532  24456788889999999999999887644 4555553

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=98.18  E-value=0.00015  Score=63.49  Aligned_cols=114  Identities=18%  Similarity=0.201  Sum_probs=76.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      .++|.|+|+ |.+|..++..|+..|.  +++++|++....+.....+............. .  .+.+++    +  +.|
T Consensus         6 ~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~~~----~--~ad   75 (315)
T PRK00066          6 HNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYSDC----K--DAD   75 (315)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHHHh----C--CCC
Confidence            379999997 9999999999999986  89999965443333333333332211223222 2  233333    3  789


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEe
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSS  195 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vS  195 (267)
                      ++|..||....  ...+..+.+..|....+.+++.+.+.+. +.+|.+|
T Consensus        76 ivIitag~~~k--~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         76 LVVITAGAPQK--PGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             EEEEecCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            99999997532  2345678888999999999999988764 4555555

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.14  E-value=2.9e-05  Score=65.81  Aligned_cols=75  Identities=15%  Similarity=0.168  Sum_probs=57.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      ++|||+||||. |+.++++|.+.|++|++..+.....+..    .+     .....+..+..|.+++.+++++.++|+||
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~----~~-----~g~~~v~~g~l~~~~l~~~l~~~~i~~VI   70 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLY----PI-----HQALTVHTGALDPQELREFLKRHSIDILV   70 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccc----cc-----cCCceEEECCCCHHHHHHHHHhcCCCEEE
Confidence            47999999998 9999999999999999988654332111    11     11233556777888899999888899999


Q ss_pred             Ecccc
Q 024488          151 HFAAV  155 (267)
Q Consensus       151 ~~Ag~  155 (267)
                      +.+..
T Consensus        71 DAtHP   75 (256)
T TIGR00715        71 DATHP   75 (256)
T ss_pred             EcCCH
Confidence            98764

This enzyme was found to be a monomer by gel filtration.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.13  E-value=2.1e-05  Score=60.64  Aligned_cols=114  Identities=21%  Similarity=0.260  Sum_probs=74.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCCC-CCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      ++|.|+|++|.+|.+++..|...+  .+++++|+.....+.....++..... ........   .+++++    +  +.|
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~~----~--~aD   71 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEAL----K--DAD   71 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGGG----T--TES
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cccccc----c--ccc
Confidence            478899999999999999999987  48999996433222222223322111 11222222   333332    2  789


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEEe
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~vS  195 (267)
                      ++|..||...  ....+..+.+..|....+.+.+.+.+.+.. .++.+|
T Consensus        72 ivvitag~~~--~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   72 IVVITAGVPR--KPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             EEEETTSTSS--STTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             EEEEeccccc--cccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            9999999753  223456788899999999999999888754 455454

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.08  E-value=9.4e-06  Score=71.27  Aligned_cols=71  Identities=20%  Similarity=0.186  Sum_probs=48.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC-C-CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKD-S-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~-G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      +|+|+||||+|.||++++++|+++ | .+++++.|+..   .+.+..+++         ...|+.   ++.+++.  +.|
T Consensus       155 ~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~---rl~~La~el---------~~~~i~---~l~~~l~--~aD  217 (340)
T PRK14982        155 KATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQE---RLQELQAEL---------GGGKIL---SLEEALP--EAD  217 (340)
T ss_pred             CCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHH---HHHHHHHHh---------ccccHH---hHHHHHc--cCC
Confidence            399999999999999999999865 5 58888886432   222222221         112333   3455665  789


Q ss_pred             EEEEccccCC
Q 024488          148 AVMHFAAVAY  157 (267)
Q Consensus       148 ~li~~Ag~~~  157 (267)
                      +|||+++...
T Consensus       218 iVv~~ts~~~  227 (340)
T PRK14982        218 IVVWVASMPK  227 (340)
T ss_pred             EEEECCcCCc
Confidence            9999998743

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.06  E-value=7.9e-06  Score=70.72  Aligned_cols=80  Identities=10%  Similarity=0.209  Sum_probs=64.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHh----CCCeEEEEecCCCCCcchhhhhhhcCCCC----CceEEEEccCCCHHHHHHHhhc
Q 024488           72 HVLVTGGAGYIGSHAALRLLK----DSYRVTIVDNLSRGNIGAVKVLQELFPEP----GRLQFIYADLGDAKAVNKFFSE  143 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~d~~~v~~~~~~  143 (267)
                      -++|-||||+-|..+++++.+    .|...-+.+|+   .+++.+.+++.....    ....++.+|.+|++++.++++ 
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn---~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak-   82 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRN---EKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK-   82 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCC---HHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh-
Confidence            589999999999999999999    78888888854   455555555543322    233488899999999999999 


Q ss_pred             CCCCEEEEccccC
Q 024488          144 NAFDAVMHFAAVA  156 (267)
Q Consensus       144 ~~~D~li~~Ag~~  156 (267)
                       +..+|+|++|..
T Consensus        83 -~~~vivN~vGPy   94 (423)
T KOG2733|consen   83 -QARVIVNCVGPY   94 (423)
T ss_pred             -hhEEEEeccccc
Confidence             779999999975

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=97.99  E-value=0.00041  Score=59.74  Aligned_cols=162  Identities=10%  Similarity=0.128  Sum_probs=97.2

Q ss_pred             cEEEEEcC-CChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc------
Q 024488           71 THVLVTGG-AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (267)
Q Consensus        71 k~vlVTGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (267)
                      ..|+|.|. +-=|++.+|..|-++|+-|+++..+.   ++. +.++.. . ...+..+..|..+..++...+..      
T Consensus         4 evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~---ed~-~~ve~e-~-~~dI~~L~ld~~~~~~~~~~l~~f~~~L~   77 (299)
T PF08643_consen    4 EVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSA---EDE-KYVESE-D-RPDIRPLWLDDSDPSSIHASLSRFASLLS   77 (299)
T ss_pred             eEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCH---HHH-HHHHhc-c-CCCCCCcccCCCCCcchHHHHHHHHHHhc
Confidence            67899995 78999999999999999999988432   221 112221 1 23466666777554444433332      


Q ss_pred             -C------CCCEEEEcccc------C-CcCCCccChHHHHHH----hH----HHHHHHHHHHHH---cCCCEEEEEeccc
Q 024488          144 -N------AFDAVMHFAAV------A-YVGESTLDPLKYYHN----IT----SNTLVVLESMAR---HGVDTLIYSSTCA  198 (267)
Q Consensus       144 -~------~~D~li~~Ag~------~-~~~~~~~~~~~~~~~----~~----~~~~~~l~~~~~---~~~~~iV~vSS~~  198 (267)
                       .      ..-...+..|+      . ..++.+..+.+.|..    ++    ..++.++|.+..   .+.+-|++.-|..
T Consensus        78 ~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~  157 (299)
T PF08643_consen   78 RPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSIS  157 (299)
T ss_pred             CCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchh
Confidence             1      11122233333      1 123333434444433    22    236779999988   3444444444421


Q ss_pred             cccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhcC---CCcEEEEeccc
Q 024488          199 TYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS---DMAVMILRLVV  249 (267)
Q Consensus       199 ~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e~---g~~~~~vrp~~  249 (267)
                      .           ....+..++-.....+.+.+++.+++|.   +++|+.++.|.
T Consensus       158 s-----------sl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~  200 (299)
T PF08643_consen  158 S-----------SLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGN  200 (299)
T ss_pred             h-----------ccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeee
Confidence            1           1234556778888889999999999884   59999999993

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=97.99  E-value=3.7e-05  Score=75.41  Aligned_cols=165  Identities=16%  Similarity=0.170  Sum_probs=112.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~  145 (267)
                      |..+|+||-||.|.+++.-|..+|++ ++++.|+.-+.-=....++.+...+..+.+-..|++..+..+.++++    +.
T Consensus      1769 ksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~~ 1848 (2376)
T KOG1202|consen 1769 KSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLGP 1848 (2376)
T ss_pred             ceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhccc
Confidence            78899999999999999999999985 55555543221111223344544455676677888888888888876    66


Q ss_pred             CCEEEEccccCCcCCCccChHHHHHHh----HHHHHHHHHHHHHc--CCCEEEEEeccc-cccCCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTLDPLKYYHNI----TSNTLVVLESMARH--GVDTLIYSSTCA-TYGEPEKMPITEETPQAPIN  218 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~--~~~~iV~vSS~~-~~g~~~~~~~~e~~~~~~~~  218 (267)
                      +-.++|.|.+......++...+.|+..    +.+|.++-..-++.  -...||..||.. ..|            ....+
T Consensus      1849 vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRG------------N~GQt 1916 (2376)
T KOG1202|consen 1849 VGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRG------------NAGQT 1916 (2376)
T ss_pred             ccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCC------------CCccc
Confidence            788999999876666666555555443    22344433333322  136788888843 333            34578


Q ss_pred             hHHHHHHHHHHHHHHhhhcCCCcEEEEecc
Q 024488          219 PYGKAKKMAEDIILDFSKNSDMAVMILRLV  248 (267)
Q Consensus       219 ~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~  248 (267)
                      .||.+..+.|.+++.-+. .|++.+.|.-|
T Consensus      1917 NYG~aNS~MERiceqRr~-~GfPG~AiQWG 1945 (2376)
T KOG1202|consen 1917 NYGLANSAMERICEQRRH-EGFPGTAIQWG 1945 (2376)
T ss_pred             ccchhhHHHHHHHHHhhh-cCCCcceeeee
Confidence            999999999999998655 57776666555

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.94  E-value=0.00036  Score=61.27  Aligned_cols=169  Identities=13%  Similarity=0.102  Sum_probs=98.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-------eEEEEecCCCC--CcchhhhhhhcC-CCCCceEEEEccCCCHHHHHHH
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRG--NIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKF  140 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~  140 (267)
                      -+|.|+|++|.+|.+++..|+..|.       +++++|.....  .+.....+.... ....... +..  .+.++++  
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-i~~--~~~~~~~--   78 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV-ATT--DPEEAFK--   78 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE-Eec--ChHHHhC--
Confidence            5899999999999999999998884       79999864311  111111122211 1111121 111  2333332  


Q ss_pred             hhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEecccc----ccCCCCCCCCCCC-CC
Q 024488          141 FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSSTCAT----YGEPEKMPITEET-PQ  214 (267)
Q Consensus       141 ~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vSS~~~----~g~~~~~~~~e~~-~~  214 (267)
                          +.|+||..||...  ...++..+.+..|....+.+.+.+.+... ..+|.+-|.=+    |-      ..+.. ..
T Consensus        79 ----daDvVVitAG~~~--k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v------~~k~s~g~  146 (323)
T TIGR01759        79 ----DVDAALLVGAFPR--KPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALI------ASKNAPDI  146 (323)
T ss_pred             ----CCCEEEEeCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHH------HHHHcCCC
Confidence                7899999999753  23456788899999999999999998864 44444444111    10      00011 12


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccce
Q 024488          215 APINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAF  256 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~  256 (267)
                      ++....|.+..-.-.+-..+++..++....++-.+|+++|+.
T Consensus       147 p~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~  188 (323)
T TIGR01759       147 PPKNFSAMTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHSN  188 (323)
T ss_pred             CHHHEEEeeHHHHHHHHHHHHHHhCcChHHeEEeEEEecCCC
Confidence            222233334444445555666667877777766666666553

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK05442 malate dehydrogenase; Provisional

Probab=97.87  E-value=0.00042  Score=60.93  Aligned_cols=170  Identities=11%  Similarity=0.052  Sum_probs=96.2

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCC-------eEEEEecCCCC--CcchhhhhhhcC-CCCCceEEEEccCCCHHHHH
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRG--NIGAVKVLQELF-PEPGRLQFIYADLGDAKAVN  138 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~  138 (267)
                      .+++|.|+|++|.+|..++..|+..|.       +++++|.....  .+.....+.... .....+.+ ..  .+.+++ 
T Consensus         3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-~~--~~y~~~-   78 (326)
T PRK05442          3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-TD--DPNVAF-   78 (326)
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-ec--ChHHHh-
Confidence            347899999999999999999988764       78998864321  111111122211 11112221 11  222322 


Q ss_pred             HHhhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC--CCEEEEEeccc---cccCCCCCCCCCCC-
Q 024488          139 KFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG--VDTLIYSSTCA---TYGEPEKMPITEET-  212 (267)
Q Consensus       139 ~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~iV~vSS~~---~~g~~~~~~~~e~~-  212 (267)
                         +  +.|+||-.||....  ..++..+.+..|....+.+.+.+.+..  .+.+|.+|--.   .|-      ..+.+ 
T Consensus        79 ---~--daDiVVitaG~~~k--~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v------~~k~s~  145 (326)
T PRK05442         79 ---K--DADVALLVGARPRG--PGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALI------AMKNAP  145 (326)
T ss_pred             ---C--CCCEEEEeCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHH------HHHHcC
Confidence               2  78999999997532  245678889999999999999999854  44555565311   110      00001 


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~  255 (267)
                      ..++....|.+-.-.-.+-..+++..+++...|+-.+|+++|+
T Consensus       146 g~p~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG  188 (326)
T PRK05442        146 DLPAENFTAMTRLDHNRALSQLAAKAGVPVADIKKMTVWGNHS  188 (326)
T ss_pred             CCCHHHEEeeeHHHHHHHHHHHHHHhCcChHHeEEeEEEECCc
Confidence            1111222233333344455556666777766666555555554

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.84  E-value=9.7e-05  Score=67.90  Aligned_cols=74  Identities=23%  Similarity=0.253  Sum_probs=52.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+|+|+|+++ +|..+|+.|+++|++|+++++..  .+...+..+++...  .+.++..|..+.     ..  +++|+||
T Consensus         6 k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~--~~~~~~~~~~l~~~--~~~~~~~~~~~~-----~~--~~~d~vv   73 (450)
T PRK14106          6 KKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKE--EDQLKEALEELGEL--GIELVLGEYPEE-----FL--EGVDLVV   73 (450)
T ss_pred             CEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCc--hHHHHHHHHHHHhc--CCEEEeCCcchh-----Hh--hcCCEEE
Confidence            8999999776 99999999999999999998632  12233333333222  356777887752     22  2789999


Q ss_pred             EccccC
Q 024488          151 HFAAVA  156 (267)
Q Consensus       151 ~~Ag~~  156 (267)
                      +++|+.
T Consensus        74 ~~~g~~   79 (450)
T PRK14106         74 VSPGVP   79 (450)
T ss_pred             ECCCCC
Confidence            999874

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.81  E-value=0.00034  Score=64.34  Aligned_cols=120  Identities=17%  Similarity=0.129  Sum_probs=74.3

Q ss_pred             EEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEEccc
Q 024488           75 VTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAA  154 (267)
Q Consensus        75 VTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li~~Ag  154 (267)
                      |+||+|++|.++++.|...|++|+.+.+.....                      +.         ....+++.++.-+.
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~----------------------~~---------~~~~~~~~~~~d~~   91 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTW----------------------AA---------GWGDRFGALVFDAT   91 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCcccccc----------------------cc---------CcCCcccEEEEECC
Confidence            888899999999999999999999865322100                      00         00013343332221


Q ss_pred             cCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHh
Q 024488          155 VAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDF  234 (267)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~  234 (267)
                      .      ...+++ +..........++.|.+  .++||+++|.....              ....|+.+|++++.+++.+
T Consensus        92 ~------~~~~~~-l~~~~~~~~~~l~~l~~--~griv~i~s~~~~~--------------~~~~~~~akaal~gl~rsl  148 (450)
T PRK08261         92 G------ITDPAD-LKALYEFFHPVLRSLAP--CGRVVVLGRPPEAA--------------ADPAAAAAQRALEGFTRSL  148 (450)
T ss_pred             C------CCCHHH-HHHHHHHHHHHHHhccC--CCEEEEEccccccC--------------CchHHHHHHHHHHHHHHHH
Confidence            1      011111 11222334445555533  46999999865531              1236999999999999999


Q ss_pred             hhc--CCCcEEEEecc
Q 024488          235 SKN--SDMAVMILRLV  248 (267)
Q Consensus       235 a~e--~g~~~~~vrp~  248 (267)
                      ++|  .++++..+.|+
T Consensus       149 a~E~~~gi~v~~i~~~  164 (450)
T PRK08261        149 GKELRRGATAQLVYVA  164 (450)
T ss_pred             HHHhhcCCEEEEEecC
Confidence            998  47888888776

>cd05295 MDH_like Malate dehydrogenase-like

Probab=97.81  E-value=0.00039  Score=63.28  Aligned_cols=168  Identities=8%  Similarity=-0.008  Sum_probs=97.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC---C----CeEEEEecCCCCCcchhhhhhhcC----CCCCceEEEEccCCCHHHHHH
Q 024488           71 THVLVTGGAGYIGSHAALRLLKD---S----YRVTIVDNLSRGNIGAVKVLQELF----PEPGRLQFIYADLGDAKAVNK  139 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~---G----~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~Dl~d~~~v~~  139 (267)
                      -+|+||||+|.||.++.-.++.-   |    ..+++++.. .+.+.+.-...++.    .....+.+. .  .+.    +
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~-~~~~~l~G~amDL~D~a~pll~~v~i~-~--~~~----e  195 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSP-ENLEKLKGLVMEVEDLAFPLLRGISVT-T--DLD----V  195 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCC-CchhhHHHHHHHHHHhHHhhcCCcEEE-E--CCH----H
Confidence            67999999999999999999873   3    245666641 12222222222221    111123222 2  233    3


Q ss_pred             HhhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC--CEEEEEecccc----ccCCCCCCCCCCC-
Q 024488          140 FFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV--DTLIYSSTCAT----YGEPEKMPITEET-  212 (267)
Q Consensus       140 ~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~iV~vSS~~~----~g~~~~~~~~e~~-  212 (267)
                      .++  +.|++|-.||....  ...+-.+.++.|....+...+.+.+...  .+|+.+.|.-+    |-      ..... 
T Consensus       196 a~~--daDvvIitag~prk--~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i------~~k~ap  265 (452)
T cd05295         196 AFK--DAHVIVLLDDFLIK--EGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSI------LIKYAP  265 (452)
T ss_pred             HhC--CCCEEEECCCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHH------HHHHcC
Confidence            333  78999999997532  3456678889999999999999988775  66776665111    00      00001 


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccce
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAF  256 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~  256 (267)
                      ..++...-|.+..-...+-..++++.+++...|+-..|+++|++
T Consensus       266 giP~~rVig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~  309 (452)
T cd05295         266 SIPRKNIIAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIGG  309 (452)
T ss_pred             CCCHHHEEEecchHHHHHHHHHHHHhCcCHHHceeeEEEEccCC
Confidence            11222223333333444555666667888777777777776553

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.80  E-value=0.00069  Score=58.73  Aligned_cols=116  Identities=22%  Similarity=0.230  Sum_probs=75.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      ++|.|+|+ |+||+.++..|+.++  .++++++......+.....+.........-..+..| .+.++++      +.|+
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~~~------~aDi   72 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYEDLK------GADI   72 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhhhc------CCCE
Confidence            47889999 999999999998876  389999975333332222222221111111223333 3344333      7899


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEec
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS  196 (267)
                      +|-.||...-  ...+-.+.+..|......+.+.+.+....-+|.+-|
T Consensus        73 VvitAG~prK--pGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          73 VVITAGVPRK--PGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             EEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence            9999997532  335667888999999999999998887655555544

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.77  E-value=0.00089  Score=58.52  Aligned_cols=114  Identities=14%  Similarity=0.181  Sum_probs=71.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcC----CCCCceEEEEccC-CCHHHHHHHhhc
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELF----PEPGRLQFIYADL-GDAKAVNKFFSE  143 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~Dl-~d~~~v~~~~~~  143 (267)
                      ++|.|+|++|.+|..++..|+..|.  +|+++++.. +.+.+.....++.    ..+....   ... +|.+   . ++ 
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~-~~~~l~~~~~dl~d~~~~~~~~~~---i~~~~d~~---~-l~-   71 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPK-SLEKLKGLRLDIYDALAAAGIDAE---IKISSDLS---D-VA-   71 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc-cccccccccchhhhchhccCCCcE---EEECCCHH---H-hC-
Confidence            4789999999999999999999986  499999732 1122211111111    1111111   111 1322   2 33 


Q ss_pred             CCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEec
Q 024488          144 NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSST  196 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vSS  196 (267)
                       +.|++|-++|....  ...+..+.++.|....+.+.+.+.+... ..||.+++
T Consensus        72 -~aDiViitag~p~~--~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n  122 (309)
T cd05294          72 -GSDIVIITAGVPRK--EGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN  122 (309)
T ss_pred             -CCCEEEEecCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence             78999999997532  2234467778888888888888877653 46666665

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.72  E-value=0.00012  Score=56.00  Aligned_cols=75  Identities=21%  Similarity=0.186  Sum_probs=50.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +++++|.|+ ||.|+.++..|++.|++ |+++.|+   .+++.+..++.  .+..+.++..  .+.   .+.+.  ..|+
T Consensus        12 ~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt---~~ra~~l~~~~--~~~~~~~~~~--~~~---~~~~~--~~Di   78 (135)
T PF01488_consen   12 GKRVLVIGA-GGAARAVAAALAALGAKEITIVNRT---PERAEALAEEF--GGVNIEAIPL--EDL---EEALQ--EADI   78 (135)
T ss_dssp             TSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESS---HHHHHHHHHHH--TGCSEEEEEG--GGH---CHHHH--TESE
T ss_pred             CCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECC---HHHHHHHHHHc--CccccceeeH--HHH---HHHHh--hCCe
Confidence            499999995 99999999999999986 9998864   34444444443  1223444443  233   34444  6899


Q ss_pred             EEEccccCC
Q 024488          149 VMHFAAVAY  157 (267)
Q Consensus       149 li~~Ag~~~  157 (267)
                      |||+.+...
T Consensus        79 vI~aT~~~~   87 (135)
T PF01488_consen   79 VINATPSGM   87 (135)
T ss_dssp             EEE-SSTTS
T ss_pred             EEEecCCCC
Confidence            999977543

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.67  E-value=0.00079  Score=61.32  Aligned_cols=169  Identities=11%  Similarity=0.053  Sum_probs=99.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC-------CC--eEEEEecCCCCCcchhhhhhhcC-CCCCceEEEEccCCCHHHHHHH
Q 024488           71 THVLVTGGAGYIGSHAALRLLKD-------SY--RVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKF  140 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~-------G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~  140 (267)
                      -+|.|+|++|.+|.+++-.|+..       |.  ++++++++....+...-.++... ....++. +..  .++++++  
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~-i~~--~~ye~~k--  175 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVS-IGI--DPYEVFQ--  175 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceE-Eec--CCHHHhC--
Confidence            58999999999999999999988       64  78888865444333333333221 1111221 112  2444433  


Q ss_pred             hhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHH-cCC-CEEEEEeccc---cccCCCCCCCCCCCCCC
Q 024488          141 FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR-HGV-DTLIYSSTCA---TYGEPEKMPITEETPQA  215 (267)
Q Consensus       141 ~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~-~~iV~vSS~~---~~g~~~~~~~~e~~~~~  215 (267)
                          +.|++|-.||....  ...+..+.++.|....+.+.+.+.+ .+. +.||.+|--.   .|-      ..+..+.+
T Consensus       176 ----daDiVVitAG~prk--pG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~v------~~k~sg~~  243 (444)
T PLN00112        176 ----DAEWALLIGAKPRG--PGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNALI------CLKNAPNI  243 (444)
T ss_pred             ----cCCEEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHHH------HHHHcCCC
Confidence                78999999997532  2456778899999999999999998 453 4555555311   010      00001111


Q ss_pred             C-CChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccce
Q 024488          216 P-INPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAF  256 (267)
Q Consensus       216 ~-~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~  256 (267)
                      + ...=..+..-.-.+-..++++.++....|+-.+|+++|++
T Consensus       244 ~~rViGtgT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGd  285 (444)
T PLN00112        244 PAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST  285 (444)
T ss_pred             CcceEEeeccHHHHHHHHHHHHHhCcCHHHcccceEEecCCC
Confidence            1 1111122223334444556667777777766667776654

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=97.66  E-value=9.2e-05  Score=60.52  Aligned_cols=160  Identities=14%  Similarity=0.070  Sum_probs=101.0

Q ss_pred             cEEEEEcCCChhHHHHHH-----HHHhCC----CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHH-HHHHH
Q 024488           71 THVLVTGGAGYIGSHAAL-----RLLKDS----YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK-AVNKF  140 (267)
Q Consensus        71 k~vlVTGasggIG~~la~-----~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~v~~~  140 (267)
                      ++.++-+++|.|+..|.-     ++-+.+    |.|+++.|++...               ++.+.+.|..-.- ++.+ 
T Consensus        13 r~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~---------------ritw~el~~~Gip~sc~a-   76 (315)
T KOG3019|consen   13 RDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA---------------RITWPELDFPGIPISCVA-   76 (315)
T ss_pred             ccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCc---------------ccccchhcCCCCceehHH-
Confidence            678888999999988876     444444    8999999765432               2222222222111 1221 


Q ss_pred             hhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC--CCEEEEEeccccccCCCCCCCCCCCCCCCCC
Q 024488          141 FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG--VDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (267)
Q Consensus       141 ~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~  218 (267)
                          .+..+.+|+......-.++-..+.+...+..+..+.+++.+..  .+..|++|-+++|-......++|+.+...+.
T Consensus        77 ----~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd  152 (315)
T KOG3019|consen   77 ----GVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFD  152 (315)
T ss_pred             ----HHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChH
Confidence                2234445554332211222222223333344777888877653  4579999999999877778889999988888


Q ss_pred             hHHHHHHHHHHHHHHhhhcCCCcEEEEecccccc
Q 024488          219 PYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFT  252 (267)
Q Consensus       219 ~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~  252 (267)
                      ..+.--.+.|..+..-.+  ..+++++|.|+|.+
T Consensus       153 ~~srL~l~WE~aA~~~~~--~~r~~~iR~GvVlG  184 (315)
T KOG3019|consen  153 ILSRLCLEWEGAALKANK--DVRVALIRIGVVLG  184 (315)
T ss_pred             HHHHHHHHHHHHhhccCc--ceeEEEEEEeEEEe
Confidence            887777777777666544  38999999996654

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.65  E-value=0.0002  Score=57.69  Aligned_cols=75  Identities=25%  Similarity=0.342  Sum_probs=45.8

Q ss_pred             cEEEEEcC----------------CChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH
Q 024488           71 THVLVTGG----------------AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA  134 (267)
Q Consensus        71 k~vlVTGa----------------sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~  134 (267)
                      |+||||+|                ||-.|.++|+++..+|++|+++.... ..           ..+..+..+.  +.+.
T Consensus         4 k~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~-~~-----------~~p~~~~~i~--v~sa   69 (185)
T PF04127_consen    4 KKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPS-SL-----------PPPPGVKVIR--VESA   69 (185)
T ss_dssp             -EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TT-S---------------TTEEEEE---SSH
T ss_pred             CEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCc-cc-----------cccccceEEE--ecch
Confidence            77777765                78999999999999999999987431 10           1133565555  4455


Q ss_pred             HHHHHHhhc--CCCCEEEEccccCCcC
Q 024488          135 KAVNKFFSE--NAFDAVMHFAAVAYVG  159 (267)
Q Consensus       135 ~~v~~~~~~--~~~D~li~~Ag~~~~~  159 (267)
                      +++.+.+.+  ...|++|++|++....
T Consensus        70 ~em~~~~~~~~~~~Di~I~aAAVsDf~   96 (185)
T PF04127_consen   70 EEMLEAVKELLPSADIIIMAAAVSDFR   96 (185)
T ss_dssp             HHHHHHHHHHGGGGSEEEE-SB--SEE
T ss_pred             hhhhhhhccccCcceeEEEecchhhee
Confidence            555554443  3569999999987543

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.61  E-value=0.0021  Score=56.12  Aligned_cols=166  Identities=14%  Similarity=0.062  Sum_probs=95.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      ++|.|+|++|.+|.++|..|+..|  .+++++|..  ..+...-.+....   ......... .+ +++.+.++  +.|+
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~---~~~~i~~~~-~~-~~~y~~~~--daDi   71 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHIN---TPAKVTGYL-GP-EELKKALK--GADV   71 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCC---CcceEEEec-CC-CchHHhcC--CCCE
Confidence            378899999999999999999888  489999964  2221111122211   111221110 11 11223333  7899


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEEeccc-------cccCCCCCCCCCCCCCCCCChH
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSSTCA-------TYGEPEKMPITEETPQAPINPY  220 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~vSS~~-------~~g~~~~~~~~e~~~~~~~~~Y  220 (267)
                      +|-.||....  ..++..+.++.|....+.+.+.+.+.+.. .||++|--.       .|-      .......++....
T Consensus        72 vvitaG~~~k--~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~------~~~~s~~p~~rvi  143 (310)
T cd01337          72 VVIPAGVPRK--PGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPVNSTVPIAAEV------LKKAGVYDPKRLF  143 (310)
T ss_pred             EEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchhhHHHHHHHH------HHHhcCCCHHHEE
Confidence            9999997532  24567888899999999999999888644 555555422       110      0000112222223


Q ss_pred             HHHHHHHHHHHHHhhhcCCCcEEEEecccccccc
Q 024488          221 GKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLV  254 (267)
Q Consensus       221 ~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~  254 (267)
                      |.+-.-...+-..++++.++....++ ++|+++|
T Consensus       144 G~~~LDs~R~~~~la~~l~v~~~~V~-~~v~GeH  176 (310)
T cd01337         144 GVTTLDVVRANTFVAELLGLDPAKVN-VPVIGGH  176 (310)
T ss_pred             eeechHHHHHHHHHHHHhCcCHHHEE-EEEEecC
Confidence            33322334555666666777666665 6566666

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.60  E-value=0.0012  Score=56.32  Aligned_cols=114  Identities=18%  Similarity=0.170  Sum_probs=73.5

Q ss_pred             EEEEcCCChhHHHHHHHHHhCC----CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           73 VLVTGGAGYIGSHAALRLLKDS----YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      |.|.||+|.+|..++..|+..|    .+|+++|......+.....+++.........+..  -+|   ..+.++  +.|+
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~--~~d---~~~~~~--~aDi   73 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSI--TDD---PYEAFK--DADV   73 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEE--CCc---hHHHhC--CCCE
Confidence            4689998999999999999998    7999999755444444444443322110111111  112   233444  7899


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEe
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSS  195 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vS  195 (267)
                      ||..+|....  ......+....|....+.+.+.+.+... ..+|++|
T Consensus        74 Vv~t~~~~~~--~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          74 VIITAGVGRK--PGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             EEECCCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999987532  2334556677888888889998887764 4555554

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.57  E-value=0.001  Score=58.80  Aligned_cols=78  Identities=21%  Similarity=0.312  Sum_probs=53.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcc---------------------hhhhhhhcCCCCCceEEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIG---------------------AVKVLQELFPEPGRLQFIY  128 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~  128 (267)
                      ++|+|.| .|++|.++++.|+..|. +++++|+..-...+                     +.+.++++. ..-+++.+.
T Consensus        25 ~~VlIiG-~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~in-p~v~i~~~~  102 (338)
T PRK12475         25 KHVLIVG-AGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKIN-SEVEIVPVV  102 (338)
T ss_pred             CcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHC-CCcEEEEEe
Confidence            8899999 58999999999999997 89989874311111                     112223321 123566677


Q ss_pred             ccCCCHHHHHHHhhcCCCCEEEEcc
Q 024488          129 ADLGDAKAVNKFFSENAFDAVMHFA  153 (267)
Q Consensus       129 ~Dl~d~~~v~~~~~~~~~D~li~~A  153 (267)
                      .|++ .+.++++++  +.|+||.+.
T Consensus       103 ~~~~-~~~~~~~~~--~~DlVid~~  124 (338)
T PRK12475        103 TDVT-VEELEELVK--EVDLIIDAT  124 (338)
T ss_pred             ccCC-HHHHHHHhc--CCCEEEEcC
Confidence            7875 456777777  789999875

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.47  E-value=0.0046  Score=54.09  Aligned_cols=115  Identities=16%  Similarity=0.102  Sum_probs=72.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      ++|.|+|+ |.+|..++..|+..|.  +++++|......+.....+...............  .|++++    +  +.|+
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~~~----~--~adi   74 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYSVT----A--NSKV   74 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHHHh----C--CCCE
Confidence            68999995 9999999999988874  7999986443222222223332211111122211  244433    3  7899


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEec
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSST  196 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vSS  196 (267)
                      ||..||....  ...+..+.+..|....+.+.+.+.+.+. +.++.+|-
T Consensus        75 vvitaG~~~k--~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN  121 (312)
T cd05293          75 VIVTAGARQN--EGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSN  121 (312)
T ss_pred             EEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccC
Confidence            9999997543  2345677888888888888888887753 34555553

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.46  E-value=0.0033  Score=54.96  Aligned_cols=114  Identities=18%  Similarity=0.212  Sum_probs=71.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|.|+|++|.+|.+++..|+..+.  +++++|...  .+.....+...   .......... .+ ++..+.++  +.|++
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~---~~~~~i~~~~-~~-~~~~~~~~--daDiv   71 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHI---PTAASVKGFS-GE-EGLENALK--GADVV   71 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcC---CcCceEEEec-CC-CchHHHcC--CCCEE
Confidence            578999999999999999998875  799998644  11111112221   1111222111 01 11223444  78999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEEec
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~vSS  196 (267)
                      |-.||....  ...+..+.+..|....+.+.+.+.+.+.. .||.+|-
T Consensus        72 vitaG~~~~--~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsN  117 (312)
T TIGR01772        72 VIPAGVPRK--PGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITN  117 (312)
T ss_pred             EEeCCCCCC--CCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            999997532  24456778888998888899888887644 4444544

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.45  E-value=0.002  Score=57.07  Aligned_cols=108  Identities=26%  Similarity=0.401  Sum_probs=66.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCc------------------c---hhhhhhhcCCCCCceEEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNI------------------G---AVKVLQELFPEPGRLQFIY  128 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~------------------~---~~~~~~~~~~~~~~~~~~~  128 (267)
                      ++|+|.|+ ||+|.++++.|+..|. +++++|...-...                  +   +.+.++++. ..-+++.+.
T Consensus        25 ~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~in-p~v~v~~~~  102 (339)
T PRK07688         25 KHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEIN-SDVRVEAIV  102 (339)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHC-CCcEEEEEe
Confidence            78999995 9999999999999998 8999986421111                  1   112222221 122455666


Q ss_pred             ccCCCHHHHHHHhhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEecccccc
Q 024488          129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG  201 (267)
Q Consensus       129 ~Dl~d~~~v~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g  201 (267)
                      .|++ .+.+.++++  +.|+||.+..         +        ......+-+.+.+.+ ..+|+.++.+.+|
T Consensus       103 ~~~~-~~~~~~~~~--~~DlVid~~D---------n--------~~~r~~ln~~~~~~~-iP~i~~~~~g~~G  154 (339)
T PRK07688        103 QDVT-AEELEELVT--GVDLIIDATD---------N--------FETRFIVNDAAQKYG-IPWIYGACVGSYG  154 (339)
T ss_pred             ccCC-HHHHHHHHc--CCCEEEEcCC---------C--------HHHHHHHHHHHHHhC-CCEEEEeeeeeee
Confidence            6775 455666776  6799988742         1        111223445556655 4577777766655

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.45  E-value=0.0042  Score=54.17  Aligned_cols=115  Identities=18%  Similarity=0.144  Sum_probs=68.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCC-CCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      |++|.|.|+ |.+|..++..++..|. +|++.|+++...+.....+.+... ...... +.. -+|.+   . ++  +.|
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~-i~~-~~d~~---~-~~--~aD   72 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTK-ITG-TNDYE---D-IA--GSD   72 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcE-EEe-CCCHH---H-HC--CCC
Confidence            578999998 9999999999999875 999999744322211111111111 111111 111 12332   2 33  789


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEEe
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~vS  195 (267)
                      ++|..+|....  ......+.+..|....+.+++.+.+.... .+|++|
T Consensus        73 iVii~~~~p~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         73 VVVITAGVPRK--PGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             EEEECCCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99999987532  23344566667777777777777766543 355444

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.44  E-value=0.0066  Score=53.36  Aligned_cols=117  Identities=14%  Similarity=0.099  Sum_probs=70.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcc-hhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIG-AVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      ++|.|.| +|.+|..++..++..|. +|+++|.++...+. ..+........+....+..  .+|.++    ++  +.|+
T Consensus         7 ~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~~----l~--~aDi   77 (321)
T PTZ00082          7 RKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYED----IA--GSDV   77 (321)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHHH----hC--CCCE
Confidence            7899999 69999999999999995 99999975543211 1111111111111222221  134432    33  7899


Q ss_pred             EEEccccCCcCCC---ccChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEEec
Q 024488          149 VMHFAAVAYVGES---TLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (267)
Q Consensus       149 li~~Ag~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~vSS  196 (267)
                      ||..||....+..   +.+..+.+..|....+.+.+.+.+.... .+|++|-
T Consensus        78 VI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         78 VIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             EEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9999997542211   1144566777777777788888776644 4555553

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.41  E-value=0.0058  Score=53.33  Aligned_cols=114  Identities=14%  Similarity=0.116  Sum_probs=72.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCCC--CceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEP--GRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      +|.|.|+ |.+|..+|..|+..|.  +++++|......+.....+.......  ..+....   .|.++++      +.|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~y~~~~------~aD   70 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GDYDDCA------DAD   70 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CCHHHhC------CCC
Confidence            4678897 9999999999998874  79999964433333222233321111  1333332   3444433      789


Q ss_pred             EEEEccccCCcCCCccC-hHHHHHHhHHHHHHHHHHHHHcCCCEEEEEec
Q 024488          148 AVMHFAAVAYVGESTLD-PLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS  196 (267)
                      +||-.||....+ .+.. -.+.+..|....+.+.+.+.+.+..-++.+-|
T Consensus        71 ivvitaG~~~kp-g~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvs  119 (307)
T cd05290          71 IIVITAGPSIDP-GNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILIT  119 (307)
T ss_pred             EEEECCCCCCCC-CCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            999999975322 1221 47788899999999999998887544444443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=97.39  E-value=0.0045  Score=53.90  Aligned_cols=113  Identities=16%  Similarity=0.156  Sum_probs=71.9

Q ss_pred             EEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           73 VLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |.|.|+ |++|..++..|+..|  .+++++|+.....+.....+.+.............  .|.+    .++  +.|++|
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~~----~l~--~aDiVI   71 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDYA----DAA--DADIVV   71 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCHH----HhC--CCCEEE
Confidence            357785 889999999999998  68999996543333333333333221112222221  2333    233  789999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEec
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSST  196 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vSS  196 (267)
                      ..||....  ...+..+.+..|....+.+.+.+.+... +.+|++|-
T Consensus        72 itag~p~~--~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sN  116 (300)
T cd00300          72 ITAGAPRK--PGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSN  116 (300)
T ss_pred             EcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            99997532  2345677788888888889998888764 45555553

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.38  E-value=0.0079  Score=52.83  Aligned_cols=115  Identities=18%  Similarity=0.148  Sum_probs=69.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCCcchhhhhhhcCCC-CCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      ++|.|.|| |.+|..++..++..| ++++++|.+....+...-.+...... +... .+.+ -+|.+    .++  +.|+
T Consensus         6 ~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~-~i~~-~~d~~----~l~--~ADi   76 (319)
T PTZ00117          6 KKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNI-NILG-TNNYE----DIK--DSDV   76 (319)
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCe-EEEe-CCCHH----HhC--CCCE
Confidence            78999996 999999999999998 78999996543222111111111110 1111 1221 12333    333  7899


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCE-EEEEec
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT-LIYSST  196 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-iV~vSS  196 (267)
                      ||..||....  ......+.+..|....+.+.+.+.+..... +|++|-
T Consensus        77 VVitag~~~~--~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         77 VVITAGVQRK--EEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             EEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9999987532  233456667777777777888887775443 555543

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.34  E-value=0.0027  Score=51.99  Aligned_cols=78  Identities=27%  Similarity=0.323  Sum_probs=50.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchh-------------------hhhhhcCCCCCceEEEEcc
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAV-------------------KVLQELFPEPGRLQFIYAD  130 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~D  130 (267)
                      ++|+|.| .||+|.++++.|+..|. +++++|...-...++.                   +.++++. ..-+++.+..+
T Consensus        22 ~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n-p~v~i~~~~~~   99 (202)
T TIGR02356        22 SHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELN-SDIQVTALKER   99 (202)
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhC-CCCEEEEehhc
Confidence            7899998 89999999999999997 8999986432222211                   1222221 11234444445


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEcc
Q 024488          131 LGDAKAVNKFFSENAFDAVMHFA  153 (267)
Q Consensus       131 l~d~~~v~~~~~~~~~D~li~~A  153 (267)
                      +. .+.+.++++  +.|+||.+.
T Consensus       100 i~-~~~~~~~~~--~~D~Vi~~~  119 (202)
T TIGR02356       100 VT-AENLELLIN--NVDLVLDCT  119 (202)
T ss_pred             CC-HHHHHHHHh--CCCEEEECC
Confidence            53 355666776  789998875

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.32  E-value=0.00051  Score=53.46  Aligned_cols=72  Identities=18%  Similarity=0.181  Sum_probs=47.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      ++++|+|+ |++|..+++.|.+.| ++|++++|+..   ...+..++...   .  .+..+..+.++   +++  +.|+|
T Consensus        20 ~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~---~~~~~~~~~~~---~--~~~~~~~~~~~---~~~--~~Dvv   85 (155)
T cd01065          20 KKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLE---KAKALAERFGE---L--GIAIAYLDLEE---LLA--EADLI   85 (155)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHH---HHHHHHHHHhh---c--ccceeecchhh---ccc--cCCEE
Confidence            78999996 999999999999996 78999986433   22222222211   0  02233444433   244  78999


Q ss_pred             EEccccC
Q 024488          150 MHFAAVA  156 (267)
Q Consensus       150 i~~Ag~~  156 (267)
                      |++....
T Consensus        86 i~~~~~~   92 (155)
T cd01065          86 INTTPVG   92 (155)
T ss_pred             EeCcCCC
Confidence            9998654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.31  E-value=0.0025  Score=54.99  Aligned_cols=74  Identities=18%  Similarity=0.234  Sum_probs=48.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHH---HHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKA---VNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---v~~~~~~~~~D  147 (267)
                      ++++|+|+++++|..+++.+.+.|++|+++++....    .+.+.+.   +.. .  ..|..+.+.   +.+.....++|
T Consensus       146 ~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~----~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~~~~~d  215 (325)
T cd08253         146 ETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEG----AELVRQA---GAD-A--VFNYRAEDLADRILAATAGQGVD  215 (325)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHc---CCC-E--EEeCCCcCHHHHHHHHcCCCceE
Confidence            899999999999999999999999999998853321    2222222   111 1  133343333   33333335799


Q ss_pred             EEEEccc
Q 024488          148 AVMHFAA  154 (267)
Q Consensus       148 ~li~~Ag  154 (267)
                      .++++++
T Consensus       216 ~vi~~~~  222 (325)
T cd08253         216 VIIEVLA  222 (325)
T ss_pred             EEEECCc
Confidence            9999986

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PLN02602 lactate dehydrogenase

Probab=97.30  E-value=0.011  Score=52.55  Aligned_cols=114  Identities=20%  Similarity=0.167  Sum_probs=73.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      ++|.|+|+ |.+|..++..|+..|.  +++++|......+.....+........... +..+ .|.++    ++  +.|+
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~~-~dy~~----~~--daDi  108 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILAS-TDYAV----TA--GSDL  108 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEeC-CCHHH----hC--CCCE
Confidence            58999995 9999999999998874  799999644333222222333211111222 2221 23433    33  7899


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEe
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSS  195 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vS  195 (267)
                      ||-.||....  ...+..+.+..|....+.+.+.+.+.+. +.+|++|
T Consensus       109 VVitAG~~~k--~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        109 CIVTAGARQI--PGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             EEECCCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999997532  2345677888888888888888887764 4555555

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.27  E-value=0.00049  Score=59.20  Aligned_cols=74  Identities=18%  Similarity=0.260  Sum_probs=47.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +++|+|+|+ ||+|++++..|++.| .+|++++|+..+.   .+..+++.... .+.+   ++    +..+.+.  ..|+
T Consensus       123 ~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a---~~l~~~~~~~~-~~~~---~~----~~~~~~~--~~Di  188 (278)
T PRK00258        123 GKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERA---EELAKLFGALG-KAEL---DL----ELQEELA--DFDL  188 (278)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHH---HHHHHHhhhcc-ceee---cc----cchhccc--cCCE
Confidence            389999996 999999999999999 7999999754333   22222221111 1111   11    1123333  6899


Q ss_pred             EEEccccCC
Q 024488          149 VMHFAAVAY  157 (267)
Q Consensus       149 li~~Ag~~~  157 (267)
                      |||+.....
T Consensus       189 vInaTp~g~  197 (278)
T PRK00258        189 IINATSAGM  197 (278)
T ss_pred             EEECCcCCC
Confidence            999976543

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.27  E-value=0.0013  Score=60.45  Aligned_cols=77  Identities=26%  Similarity=0.269  Sum_probs=48.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|+|+|||+++ +|.++|+.|++.|++|++.++.........+.+++   .  .+.+...+  +..++   .. .++|+|
T Consensus         5 ~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~---~--g~~~~~~~--~~~~~---~~-~~~d~v   72 (447)
T PRK02472          5 NKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE---E--GIKVICGS--HPLEL---LD-EDFDLM   72 (447)
T ss_pred             CCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh---c--CCEEEeCC--CCHHH---hc-CcCCEE
Confidence            38999999876 99999999999999999998643222222122222   1  23333322  11121   22 148999


Q ss_pred             EEccccCCc
Q 024488          150 MHFAAVAYV  158 (267)
Q Consensus       150 i~~Ag~~~~  158 (267)
                      |+++|+...
T Consensus        73 V~s~gi~~~   81 (447)
T PRK02472         73 VKNPGIPYT   81 (447)
T ss_pred             EECCCCCCC
Confidence            999998643

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.26  E-value=0.0009  Score=57.34  Aligned_cols=74  Identities=22%  Similarity=0.271  Sum_probs=47.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      .|+++|+|+ |++|++++..|++.|++|++++|+..   +..+..+++... ........|     +  ...  ...|+|
T Consensus       117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~---~~~~la~~~~~~-~~~~~~~~~-----~--~~~--~~~Div  182 (270)
T TIGR00507       117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVS---KAEELAERFQRY-GEIQAFSMD-----E--LPL--HRVDLI  182 (270)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHhhc-CceEEechh-----h--hcc--cCccEE
Confidence            388999997 89999999999999999999986543   332322332111 122222111     1  111  268999


Q ss_pred             EEccccCC
Q 024488          150 MHFAAVAY  157 (267)
Q Consensus       150 i~~Ag~~~  157 (267)
                      ||+.+...
T Consensus       183 Inatp~gm  190 (270)
T TIGR00507       183 INATSAGM  190 (270)
T ss_pred             EECCCCCC
Confidence            99987653

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.22  E-value=0.0017  Score=54.11  Aligned_cols=74  Identities=19%  Similarity=0.299  Sum_probs=55.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHH-hhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~-~~~~~~D~l  149 (267)
                      |+++|.| .|-+|+.+|+.|.++|++|+++++.   .+...+...+    ......+.+|-+|++.++++ ++  +.|++
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d---~~~~~~~~~~----~~~~~~v~gd~t~~~~L~~agi~--~aD~v   70 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRD---EERVEEFLAD----ELDTHVVIGDATDEDVLEEAGID--DADAV   70 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcC---HHHHHHHhhh----hcceEEEEecCCCHHHHHhcCCC--cCCEE
Confidence            4677777 6899999999999999999999953   3333332221    23678899999999998887 44  78998


Q ss_pred             EEccc
Q 024488          150 MHFAA  154 (267)
Q Consensus       150 i~~Ag  154 (267)
                      |-.-+
T Consensus        71 va~t~   75 (225)
T COG0569          71 VAATG   75 (225)
T ss_pred             EEeeC
Confidence            87655

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.21  E-value=0.0035  Score=54.65  Aligned_cols=99  Identities=20%  Similarity=0.171  Sum_probs=62.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhh---cCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS---ENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~---~~~~D  147 (267)
                      ++++|+|+++++|..+++.+...|++|++++++..   + .+.+.+.   +..   ...|..+.+..+.+.+   ..++|
T Consensus       168 ~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~---~-~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~d  237 (342)
T cd08266         168 ETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSED---K-LERAKEL---GAD---YVIDYRKEDFVREVRELTGKRGVD  237 (342)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHH---H-HHHHHHc---CCC---eEEecCChHHHHHHHHHhCCCCCc
Confidence            78999999999999999999999999998875332   2 1222222   111   1235555444444333   34799


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEecccc
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCAT  199 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~  199 (267)
                      ++++++|..           .+       ...++.+.+  .+++|.+++...
T Consensus       238 ~~i~~~g~~-----------~~-------~~~~~~l~~--~G~~v~~~~~~~  269 (342)
T cd08266         238 VVVEHVGAA-----------TW-------EKSLKSLAR--GGRLVTCGATTG  269 (342)
T ss_pred             EEEECCcHH-----------HH-------HHHHHHhhc--CCEEEEEecCCC
Confidence            999998731           11       122334433  378999887544

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.20  E-value=0.0067  Score=54.45  Aligned_cols=115  Identities=11%  Similarity=0.090  Sum_probs=70.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-e----EEE--E--ecCCCCCcchhhhhhhcC-CCCCceEEEEccCCCHHHHHHH
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-R----VTI--V--DNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKF  140 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~----V~~--~--~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~  140 (267)
                      -+|.|+|++|.+|.+++-.|+..|. .    |.+  +  +++....+.....+.... ....++.+ ..  .+.++++  
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i-~~--~~y~~~k--  119 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSI-GI--DPYEVFE--  119 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEE-ec--CCHHHhC--
Confidence            6899999999999999999998874 3    333  3  433322222222222211 11112211 11  2333333  


Q ss_pred             hhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC--CCEEEEEec
Q 024488          141 FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG--VDTLIYSST  196 (267)
Q Consensus       141 ~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~iV~vSS  196 (267)
                          +.|++|..||....  ...+..+.+..|....+.+.+.+.+..  ..+||.+|-
T Consensus       120 ----daDIVVitAG~prk--pg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       120 ----DADWALLIGAKPRG--PGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             ----CCCEEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence                78999999997532  245677888999999999999998843  345555553

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.18  E-value=0.0082  Score=52.46  Aligned_cols=112  Identities=18%  Similarity=0.182  Sum_probs=69.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|.|.|+ |.+|..++..|+..|  .+|++++++....+.....+..............   .|.++    ++  +.|++
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~~----l~--~aDiV   71 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYAD----CK--GADVV   71 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHHH----hC--CCCEE
Confidence            6888896 999999999999999  6899999754322211111221111111222221   23333    33  78999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEe
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSS  195 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vS  195 (267)
                      |.+++....  ...+..+....|....+.+.+.+.+.+. +.++.++
T Consensus        72 iita~~~~~--~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          72 VITAGANQK--PGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             EEccCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999987532  2334566677788778888888877653 4444454

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.17  E-value=0.005  Score=54.67  Aligned_cols=78  Identities=19%  Similarity=0.202  Sum_probs=52.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhh--cC
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS--EN  144 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~--~~  144 (267)
                      ..++.|||.||+||+|++.++-+...| ++|+.++ +..    ..+.++++..    -  ...|..+++-++...+  ..
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~-s~e----~~~l~k~lGA----d--~vvdy~~~~~~e~~kk~~~~  224 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTAC-SKE----KLELVKKLGA----D--EVVDYKDENVVELIKKYTGK  224 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEc-ccc----hHHHHHHcCC----c--EeecCCCHHHHHHHHhhcCC
Confidence            345899999999999999998888889 5555443 222    2233344321    1  2357777666655555  35


Q ss_pred             CCCEEEEccccC
Q 024488          145 AFDAVMHFAAVA  156 (267)
Q Consensus       145 ~~D~li~~Ag~~  156 (267)
                      ++|+|+.++|..
T Consensus       225 ~~DvVlD~vg~~  236 (347)
T KOG1198|consen  225 GVDVVLDCVGGS  236 (347)
T ss_pred             CccEEEECCCCC
Confidence            799999999863

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.16  E-value=0.0053  Score=54.08  Aligned_cols=76  Identities=24%  Similarity=0.187  Sum_probs=47.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~  146 (267)
                      +++|||+||+||+|...++-+.+.|++++++..+.   ++.. .++++   +...   ..|..+.   +.++++....++
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~---~k~~-~~~~l---GAd~---vi~y~~~~~~~~v~~~t~g~gv  212 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSS---EKLE-LLKEL---GADH---VINYREEDFVEQVRELTGGKGV  212 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH---HHHH-HHHhc---CCCE---EEcCCcccHHHHHHHHcCCCCc
Confidence            38999999999999998888888897776666322   2222 33333   2111   1222232   233333333479


Q ss_pred             CEEEEcccc
Q 024488          147 DAVMHFAAV  155 (267)
Q Consensus       147 D~li~~Ag~  155 (267)
                      |+++...|.
T Consensus       213 Dvv~D~vG~  221 (326)
T COG0604         213 DVVLDTVGG  221 (326)
T ss_pred             eEEEECCCH
Confidence            999998873

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.15  E-value=0.001  Score=57.43  Aligned_cols=76  Identities=17%  Similarity=0.215  Sum_probs=56.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      ..++|-||+|+.|.-++++|+.+|.+-.+.+|+.   .++......+   +.+...++  +-+++.+++++.  +.++|+
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~---~kl~~l~~~L---G~~~~~~p--~~~p~~~~~~~~--~~~VVl   76 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSS---AKLDALRASL---GPEAAVFP--LGVPAALEAMAS--RTQVVL   76 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCH---HHHHHHHHhc---CccccccC--CCCHHHHHHHHh--cceEEE
Confidence            5689999999999999999999999998888644   3333333333   33343344  444888888888  789999


Q ss_pred             EccccC
Q 024488          151 HFAAVA  156 (267)
Q Consensus       151 ~~Ag~~  156 (267)
                      ||+|..
T Consensus        77 ncvGPy   82 (382)
T COG3268          77 NCVGPY   82 (382)
T ss_pred             eccccc
Confidence            999974

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.15  E-value=0.017  Score=50.34  Aligned_cols=115  Identities=13%  Similarity=0.134  Sum_probs=68.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcch-hhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGA-VKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      ++|.|.|+ |.+|..+|..|+..|+ +|+++|......+.. .+..+......... .+.. -+|.++    ++  +.|+
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~-~i~~-t~d~~~----~~--~aDi   72 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDT-KVTG-TNNYAD----TA--NSDI   72 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCc-EEEe-cCCHHH----hC--CCCE
Confidence            57889995 9999999999999886 899999643211101 01111100000011 1111 123333    23  6899


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEec
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSST  196 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vSS  196 (267)
                      +|-.||....  ......+.+..|....+.+.+.+.+... ..||.+|-
T Consensus        73 VIitag~p~~--~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        73 VVITAGLPRK--PGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             EEEcCCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9999997532  2334556777888888888888887753 45555554

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.14  E-value=0.01  Score=44.28  Aligned_cols=96  Identities=18%  Similarity=0.229  Sum_probs=53.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCC-CCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           72 HVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSR-GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~-G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|.|.||||.+|+++++.|++. .++++.+..+.. ......+..... .....+.+..   .+.+.+    .  ++|++
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~---~~~~~~----~--~~Dvv   70 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHP-KGFEDLSVED---ADPEEL----S--DVDVV   70 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGG-TTTEEEBEEE---TSGHHH----T--TESEE
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhcccc-ccccceeEee---cchhHh----h--cCCEE
Confidence            5899999999999999999986 346555543222 222222221111 1111222222   344333    2  78999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEec
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS  196 (267)
                      |.+.+.                  .....+.+.+.+.+. +||=.|+
T Consensus        71 f~a~~~------------------~~~~~~~~~~~~~g~-~ViD~s~   98 (121)
T PF01118_consen   71 FLALPH------------------GASKELAPKLLKAGI-KVIDLSG   98 (121)
T ss_dssp             EE-SCH------------------HHHHHHHHHHHHTTS-EEEESSS
T ss_pred             EecCch------------------hHHHHHHHHHhhCCc-EEEeCCH
Confidence            998642                  234556666667665 5555555

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.12  E-value=0.019  Score=43.61  Aligned_cols=108  Identities=23%  Similarity=0.331  Sum_probs=67.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchh-------------------hhhhhcCCCCCceEEEEcc
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAV-------------------KVLQELFPEPGRLQFIYAD  130 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~D  130 (267)
                      ++|+|.| .|++|.++++.|+..|. +++++|...-...++.                   +.++++. ...++..+..+
T Consensus         3 ~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~n-p~~~v~~~~~~   80 (135)
T PF00899_consen    3 KRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEIN-PDVEVEAIPEK   80 (135)
T ss_dssp             -EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHS-TTSEEEEEESH
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhc-Cceeeeeeecc
Confidence            6899998 79999999999999997 7888885322211111                   1122221 12356677777


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEecccccc
Q 024488          131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG  201 (267)
Q Consensus       131 l~d~~~v~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g  201 (267)
                      + +.+...++++  +.|+||.+...                 ......+.+.+.+.+ ..+|..+..+.+|
T Consensus        81 ~-~~~~~~~~~~--~~d~vi~~~d~-----------------~~~~~~l~~~~~~~~-~p~i~~~~~g~~G  130 (135)
T PF00899_consen   81 I-DEENIEELLK--DYDIVIDCVDS-----------------LAARLLLNEICREYG-IPFIDAGVNGFYG  130 (135)
T ss_dssp             C-SHHHHHHHHH--TSSEEEEESSS-----------------HHHHHHHHHHHHHTT--EEEEEEEETTEE
T ss_pred             c-cccccccccc--CCCEEEEecCC-----------------HHHHHHHHHHHHHcC-CCEEEEEeecCEE
Confidence            7 5566777776  78999987531                 112223444566665 4788877765554

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.06  E-value=0.0017  Score=60.88  Aligned_cols=33  Identities=24%  Similarity=0.250  Sum_probs=30.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      .|+|+|+|+ ||+|++++..|++.|++|++++|+
T Consensus       379 ~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~  411 (529)
T PLN02520        379 GKLFVVIGA-GGAGKALAYGAKEKGARVVIANRT  411 (529)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCC
Confidence            389999998 799999999999999999998864

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.04  E-value=0.0027  Score=58.32  Aligned_cols=72  Identities=15%  Similarity=0.248  Sum_probs=53.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHH-hhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~-~~~~~~D~l  149 (267)
                      |+|+|.|+ |.+|+++++.|.+.|++|+++++++.   .. +.+++    ...+.++.+|.++.+.++++ ++  +.|.+
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~---~~-~~~~~----~~~~~~~~gd~~~~~~l~~~~~~--~a~~v   69 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEE---RL-RRLQD----RLDVRTVVGNGSSPDVLREAGAE--DADLL   69 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHH---HH-HHHHh----hcCEEEEEeCCCCHHHHHHcCCC--cCCEE
Confidence            46888886 99999999999999999999985332   22 12211    12577888999999888877 54  67888


Q ss_pred             EEcc
Q 024488          150 MHFA  153 (267)
Q Consensus       150 i~~A  153 (267)
                      |-+.
T Consensus        70 i~~~   73 (453)
T PRK09496         70 IAVT   73 (453)
T ss_pred             EEec
Confidence            7764

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.03  E-value=0.0037  Score=56.17  Aligned_cols=101  Identities=20%  Similarity=0.296  Sum_probs=61.7

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHH-hhcCCC
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAF  146 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~-~~~~~~  146 (267)
                      .+++|.|.||||.+|.++++.|.++ +.+|..+.+.....+    .+....     ......|+.+.++++.. ++  ++
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~----~i~~~~-----~~l~~~~~~~~~~~~~~~~~--~~  105 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQ----SFGSVF-----PHLITQDLPNLVAVKDADFS--DV  105 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCC----CchhhC-----ccccCccccceecCCHHHhc--CC
Confidence            3468999999999999999999998 679998875322111    111110     01112233322222221 33  78


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccc
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATY  200 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~  200 (267)
                      |++|-+.+.                  .....+++.+ +. ..+||-.|+..-+
T Consensus       106 DvVf~Alp~------------------~~s~~i~~~~-~~-g~~VIDlSs~fRl  139 (381)
T PLN02968        106 DAVFCCLPH------------------GTTQEIIKAL-PK-DLKIVDLSADFRL  139 (381)
T ss_pred             CEEEEcCCH------------------HHHHHHHHHH-hC-CCEEEEcCchhcc
Confidence            999987642                  1455677776 33 3688888886654

>PRK06849 hypothetical protein; Provisional

Probab=96.98  E-value=0.0048  Score=55.65  Aligned_cols=78  Identities=15%  Similarity=0.117  Sum_probs=49.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH----HHHHHHhhcCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA----KAVNKFFSENA  145 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~----~~v~~~~~~~~  145 (267)
                      +|+|||||++..+|.++++.|.+.|++|++++.....   .... .+.   -.+...+...-.|.    +.+.+++++.+
T Consensus         4 ~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~---~~~~-s~~---~d~~~~~p~p~~d~~~~~~~L~~i~~~~~   76 (389)
T PRK06849          4 KKTVLITGARAPAALELARLFHNAGHTVILADSLKYP---LSRF-SRA---VDGFYTIPSPRWDPDAYIQALLSIVQREN   76 (389)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH---HHHH-HHh---hhheEEeCCCCCCHHHHHHHHHHHHHHcC
Confidence            4899999999999999999999999999999854221   1111 000   01121221112232    44555566678


Q ss_pred             CCEEEEccc
Q 024488          146 FDAVMHFAA  154 (267)
Q Consensus       146 ~D~li~~Ag  154 (267)
                      +|+||-...
T Consensus        77 id~vIP~~e   85 (389)
T PRK06849         77 IDLLIPTCE   85 (389)
T ss_pred             CCEEEECCh
Confidence            999998654

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.97  E-value=0.0099  Score=52.55  Aligned_cols=33  Identities=18%  Similarity=0.308  Sum_probs=27.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCe---EEEEec
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYR---VTIVDN  102 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~---V~~~~r  102 (267)
                      |++|+|.||||++|+++++.|.++||.   +..+.+
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s   36 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLAS   36 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEc
Confidence            478999999999999999999998875   355553

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.97  E-value=0.015  Score=52.11  Aligned_cols=73  Identities=22%  Similarity=0.212  Sum_probs=51.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      ++|+|.|+ |.+|+..++.|...|++|++++++..   ++.+.....   +.   .+..+..+.+++.+.+.  ..|+||
T Consensus       168 ~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~---~~~~l~~~~---g~---~v~~~~~~~~~l~~~l~--~aDvVI  235 (370)
T TIGR00518       168 GDVTIIGG-GVVGTNAAKMANGLGATVTILDINID---RLRQLDAEF---GG---RIHTRYSNAYEIEDAVK--RADLLI  235 (370)
T ss_pred             ceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHH---HHHHHHHhc---Cc---eeEeccCCHHHHHHHHc--cCCEEE
Confidence            67899985 89999999999999999999986432   222111111   11   12345567778888877  789999


Q ss_pred             Ecccc
Q 024488          151 HFAAV  155 (267)
Q Consensus       151 ~~Ag~  155 (267)
                      ++++.
T Consensus       236 ~a~~~  240 (370)
T TIGR00518       236 GAVLI  240 (370)
T ss_pred             Ecccc
Confidence            98854

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.96  E-value=0.0019  Score=56.49  Aligned_cols=33  Identities=27%  Similarity=0.347  Sum_probs=30.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      ++|.|.| +|.+|..++..|++.|++|++++++.
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~   35 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADP   35 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCH
Confidence            5799999 89999999999999999999999754

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.94  E-value=0.011  Score=49.20  Aligned_cols=80  Identities=24%  Similarity=0.296  Sum_probs=50.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhh----------------hhhhcCCCCC--ceEEEEccC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVK----------------VLQELFPEPG--RLQFIYADL  131 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~----------------~~~~~~~~~~--~~~~~~~Dl  131 (267)
                      ++|+|.| .||+|.++++.|+..|. +++++|...-...++.+                ..+.+....+  +++.+..++
T Consensus        22 ~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~i  100 (228)
T cd00757          22 ARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNERL  100 (228)
T ss_pred             CcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEeccee
Confidence            7899998 89999999999999996 77777643211111111                1111111122  455555556


Q ss_pred             CCHHHHHHHhhcCCCCEEEEccc
Q 024488          132 GDAKAVNKFFSENAFDAVMHFAA  154 (267)
Q Consensus       132 ~d~~~v~~~~~~~~~D~li~~Ag  154 (267)
                       +.+.+.++++  ++|+||.+..
T Consensus       101 -~~~~~~~~~~--~~DvVi~~~d  120 (228)
T cd00757         101 -DAENAEELIA--GYDLVLDCTD  120 (228)
T ss_pred             -CHHHHHHHHh--CCCEEEEcCC
Confidence             3456667776  6899998764

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.88  E-value=0.0083  Score=55.19  Aligned_cols=76  Identities=22%  Similarity=0.201  Sum_probs=53.8

Q ss_pred             CcEEEEEcC----------------CChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC
Q 024488           70 VTHVLVTGG----------------AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD  133 (267)
Q Consensus        70 ~k~vlVTGa----------------sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d  133 (267)
                      +|+||||+|                ||-.|.+||+++..+|++|+++.- +.+.           ..+..++.+.+  .+
T Consensus       256 gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~G-p~~~-----------~~p~~v~~i~V--~t  321 (475)
T PRK13982        256 GRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISG-PVDL-----------ADPQGVKVIHV--ES  321 (475)
T ss_pred             CCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeC-CcCC-----------CCCCCceEEEe--cC
Confidence            399999986                688999999999999999999862 1110           11334665554  45


Q ss_pred             HHHHHHHhhc-CCCCEEEEccccCCcC
Q 024488          134 AKAVNKFFSE-NAFDAVMHFAAVAYVG  159 (267)
Q Consensus       134 ~~~v~~~~~~-~~~D~li~~Ag~~~~~  159 (267)
                      .+++.+++.+ ...|++|++|++....
T Consensus       322 a~eM~~av~~~~~~Di~I~aAAVaDyr  348 (475)
T PRK13982        322 ARQMLAAVEAALPADIAIFAAAVADWR  348 (475)
T ss_pred             HHHHHHHHHhhCCCCEEEEecccccee
Confidence            5665555543 3479999999986543

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.86  E-value=0.033  Score=46.99  Aligned_cols=78  Identities=22%  Similarity=0.221  Sum_probs=50.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchh-------------------hhhhhcCCCCCceEEEEcc
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAV-------------------KVLQELFPEPGRLQFIYAD  130 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~D  130 (267)
                      ++|+|.|+ ||+|.++++.|+..|. +++++|...-...++.                   +.++++. ...+++.+...
T Consensus        33 ~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~ln-p~v~i~~~~~~  110 (245)
T PRK05690         33 ARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARIN-PHIAIETINAR  110 (245)
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHC-CCCEEEEEecc
Confidence            88999986 9999999999999996 7888875322222211                   1122221 12245555555


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEcc
Q 024488          131 LGDAKAVNKFFSENAFDAVMHFA  153 (267)
Q Consensus       131 l~d~~~v~~~~~~~~~D~li~~A  153 (267)
                      ++ .+.+.++++  ++|+||.+.
T Consensus       111 i~-~~~~~~~~~--~~DiVi~~~  130 (245)
T PRK05690        111 LD-DDELAALIA--GHDLVLDCT  130 (245)
T ss_pred             CC-HHHHHHHHh--cCCEEEecC
Confidence            54 445666676  789999875

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.86  E-value=0.0037  Score=62.61  Aligned_cols=77  Identities=19%  Similarity=0.264  Sum_probs=56.5

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhC-CCe-------------EEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKD-SYR-------------VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA  134 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~-G~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~  134 (267)
                      .+|+|+|.|+ |.||+..++.|++. +++             |.+++++   .+.+.+..+..    .++..+.+|++|.
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~---~~~a~~la~~~----~~~~~v~lDv~D~  639 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLY---LKDAKETVEGI----ENAEAVQLDVSDS  639 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCC---HHHHHHHHHhc----CCCceEEeecCCH
Confidence            3689999995 99999999999875 334             6666643   22332222222    2567789999999


Q ss_pred             HHHHHHhhcCCCCEEEEcccc
Q 024488          135 KAVNKFFSENAFDAVMHFAAV  155 (267)
Q Consensus       135 ~~v~~~~~~~~~D~li~~Ag~  155 (267)
                      +++.++++  ++|+||++...
T Consensus       640 e~L~~~v~--~~DaVIsalP~  658 (1042)
T PLN02819        640 ESLLKYVS--QVDVVISLLPA  658 (1042)
T ss_pred             HHHHHhhc--CCCEEEECCCc
Confidence            99999888  69999999754

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.85  E-value=0.018  Score=45.99  Aligned_cols=77  Identities=21%  Similarity=0.256  Sum_probs=47.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchh------------------hhhhhcCCCCCceEEEEccCC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAV------------------KVLQELFPEPGRLQFIYADLG  132 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~Dl~  132 (267)
                      +|+|.| .|++|.++++.|+..|. +++++|...-...++.                  +.++++. ...+++.+...+.
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~ln-p~v~i~~~~~~~~   78 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREIN-PFVKIEAINIKID   78 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHC-CCCEEEEEEeecC
Confidence            478888 69999999999999998 5999986431111111                  1111221 1224445555554


Q ss_pred             CHHHHHHHhhcCCCCEEEEcc
Q 024488          133 DAKAVNKFFSENAFDAVMHFA  153 (267)
Q Consensus       133 d~~~v~~~~~~~~~D~li~~A  153 (267)
                      . +.+.++++  ++|+||.+.
T Consensus        79 ~-~~~~~~l~--~~DlVi~~~   96 (174)
T cd01487          79 E-NNLEGLFG--DCDIVVEAF   96 (174)
T ss_pred             h-hhHHHHhc--CCCEEEECC
Confidence            3 45666676  788888773

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.85  E-value=0.015  Score=52.26  Aligned_cols=79  Identities=27%  Similarity=0.310  Sum_probs=49.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCC----------------Ccch---hhhhhhcCCCCCceEEEEcc
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRG----------------NIGA---VKVLQELFPEPGRLQFIYAD  130 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~----------------~~~~---~~~~~~~~~~~~~~~~~~~D  130 (267)
                      ++|+|.| .||+|.++++.|+..|. +++++|+..-.                ..++   .+.++++.+ ..+++.+...
T Consensus       136 ~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~v~v~~~~~~  213 (376)
T PRK08762        136 ARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNP-DVQVEAVQER  213 (376)
T ss_pred             CcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCC-CCEEEEEecc
Confidence            7888886 69999999999999997 78888864111                1111   122222211 1234445444


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEccc
Q 024488          131 LGDAKAVNKFFSENAFDAVMHFAA  154 (267)
Q Consensus       131 l~d~~~v~~~~~~~~~D~li~~Ag  154 (267)
                      +. .+.+.++++  +.|+||++..
T Consensus       214 ~~-~~~~~~~~~--~~D~Vv~~~d  234 (376)
T PRK08762        214 VT-SDNVEALLQ--DVDVVVDGAD  234 (376)
T ss_pred             CC-hHHHHHHHh--CCCEEEECCC
Confidence            44 345666676  7899998763

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.82  E-value=0.0047  Score=54.03  Aligned_cols=33  Identities=21%  Similarity=0.191  Sum_probs=29.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      .+|+|+||+|++|..+++.+...|++|++++++
T Consensus       140 ~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s  172 (325)
T TIGR02825       140 ETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGS  172 (325)
T ss_pred             CEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCC
Confidence            799999999999999988888889999988753

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.80  E-value=0.042  Score=44.82  Aligned_cols=110  Identities=24%  Similarity=0.307  Sum_probs=63.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchh---------------------hhhhhcCCCCCceEEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAV---------------------KVLQELFPEPGRLQFIY  128 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~  128 (267)
                      .+|+|.| .||+|.++++.|+..|. +++++|...-...++.                     +.++++- ..-+++.+.
T Consensus        20 s~VlviG-~gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lN-p~v~i~~~~   97 (198)
T cd01485          20 AKVLIIG-AGALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELN-PNVKLSIVE   97 (198)
T ss_pred             CcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHC-CCCEEEEEe
Confidence            7888988 56699999999999996 6888875322111111                     1122221 112444555


Q ss_pred             ccCCC-HHHHHHHhhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccC
Q 024488          129 ADLGD-AKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGE  202 (267)
Q Consensus       129 ~Dl~d-~~~v~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~  202 (267)
                      .++.+ .+...++++  .+|+||.+-.         +        ......+-+.+.+.+. .+|..++.+.+|.
T Consensus        98 ~~~~~~~~~~~~~~~--~~dvVi~~~d---------~--------~~~~~~ln~~c~~~~i-p~i~~~~~G~~G~  152 (198)
T cd01485          98 EDSLSNDSNIEEYLQ--KFTLVIATEE---------N--------YERTAKVNDVCRKHHI-PFISCATYGLIGY  152 (198)
T ss_pred             cccccchhhHHHHHh--CCCEEEECCC---------C--------HHHHHHHHHHHHHcCC-CEEEEEeecCEEE
Confidence            55542 344556666  6788886531         0        1112234455666654 6788888777763

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.72  E-value=0.011  Score=51.17  Aligned_cols=81  Identities=12%  Similarity=0.124  Sum_probs=48.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCC-CCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      |+++|.|+ ||-+++++..|+..|+ +|+++.|+....+++.+..+++... +..+.+  .++.+.+.+.+.+.  +.|+
T Consensus       125 k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~l~~~~~--~aDi  199 (288)
T PRK12749        125 KTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTV--TDLADQQAFAEALA--SADI  199 (288)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEE--echhhhhhhhhhcc--cCCE
Confidence            89999995 8889999999999996 8989887543223333333333111 111222  22222222333333  6899


Q ss_pred             EEEccccC
Q 024488          149 VMHFAAVA  156 (267)
Q Consensus       149 li~~Ag~~  156 (267)
                      |||+-.+.
T Consensus       200 vINaTp~G  207 (288)
T PRK12749        200 LTNGTKVG  207 (288)
T ss_pred             EEECCCCC
Confidence            99976543

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=96.71  E-value=0.04  Score=47.94  Aligned_cols=112  Identities=14%  Similarity=0.154  Sum_probs=65.3

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCC-CCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |.|.|+ |.+|..++..|+..|. +|+++|+++...+.....+.+... ...... +... +|.++    ++  +.|++|
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~-I~~t-~d~~~----l~--dADiVI   71 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTK-VTGT-NDYED----IA--GSDVVV   71 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeE-EEEc-CCHHH----hC--CCCEEE
Confidence            458897 9999999999998876 999999754321111111111111 111111 1211 23332    33  789999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEEe
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~vS  195 (267)
                      .++|....  ...+..+....|....+.+++.+.+.... .+|++|
T Consensus        72 it~g~p~~--~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          72 ITAGIPRK--PGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             EecCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99987532  22344456667777777888888776544 444444

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.70  E-value=0.0013  Score=53.70  Aligned_cols=33  Identities=27%  Similarity=0.328  Sum_probs=29.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      +|+++|+|. |.+|+++++.|.+.|++|++.+++
T Consensus        28 gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~   60 (200)
T cd01075          28 GKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADIN   60 (200)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCC
Confidence            389999996 699999999999999999988754

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.69  E-value=0.0063  Score=52.54  Aligned_cols=72  Identities=22%  Similarity=0.179  Sum_probs=45.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      ++|+|.| +||.|++++..|++.|+ +|++++|+..+.+.+.+.+.+.   .....+...     +++.+.+.  ..|+|
T Consensus       128 k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~---~~~~~~~~~-----~~~~~~~~--~aDiV  196 (284)
T PRK12549        128 ERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR---FPAARATAG-----SDLAAALA--AADGL  196 (284)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh---CCCeEEEec-----cchHhhhC--CCCEE
Confidence            8899999 58999999999999997 7999987543333332222211   112222221     22233333  68999


Q ss_pred             EEcc
Q 024488          150 MHFA  153 (267)
Q Consensus       150 i~~A  153 (267)
                      ||+.
T Consensus       197 InaT  200 (284)
T PRK12549        197 VHAT  200 (284)
T ss_pred             EECC
Confidence            9994

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.67  E-value=0.0087  Score=52.70  Aligned_cols=75  Identities=19%  Similarity=0.139  Sum_probs=46.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhh-cCCCCCceEEEEccCCC-HHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQE-LFPEPGRLQFIYADLGD-AKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~D  147 (267)
                      .+|+|+||+|++|..+++.+...|+ +|++++++.   ++. +.+.+ +   +.. .++..+-.+ .+.+.++.. .++|
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~---~~~-~~~~~~l---Ga~-~vi~~~~~~~~~~i~~~~~-~gvd  226 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSD---EKC-QLLKSEL---GFD-AAINYKTDNVAERLRELCP-EGVD  226 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCH---HHH-HHHHHhc---CCc-EEEECCCCCHHHHHHHHCC-CCce
Confidence            7999999999999999888888898 798887432   221 22222 2   111 122211112 233444332 4799


Q ss_pred             EEEEccc
Q 024488          148 AVMHFAA  154 (267)
Q Consensus       148 ~li~~Ag  154 (267)
                      ++++++|
T Consensus       227 ~vid~~g  233 (345)
T cd08293         227 VYFDNVG  233 (345)
T ss_pred             EEEECCC
Confidence            9999876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.67  E-value=0.033  Score=45.94  Aligned_cols=78  Identities=19%  Similarity=0.229  Sum_probs=48.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchh------------------hhhhhcCCCCCceEEEEccC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAV------------------KVLQELFPEPGRLQFIYADL  131 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~Dl  131 (267)
                      .+|+|.| .||+|.++++.|+..|. +++++|...-...++.                  +.++++. ...+++.+...+
T Consensus        29 ~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~ln-p~v~v~~~~~~i  106 (212)
T PRK08644         29 AKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEIN-PFVEIEAHNEKI  106 (212)
T ss_pred             CCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHC-CCCEEEEEeeec
Confidence            7899999 69999999999999997 5888886421111111                  1111211 122445555555


Q ss_pred             CCHHHHHHHhhcCCCCEEEEcc
Q 024488          132 GDAKAVNKFFSENAFDAVMHFA  153 (267)
Q Consensus       132 ~d~~~v~~~~~~~~~D~li~~A  153 (267)
                      ++ +.+.++++  ++|+||.+.
T Consensus       107 ~~-~~~~~~~~--~~DvVI~a~  125 (212)
T PRK08644        107 DE-DNIEELFK--DCDIVVEAF  125 (212)
T ss_pred             CH-HHHHHHHc--CCCEEEECC
Confidence            44 45556666  678888773

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.65  E-value=0.0038  Score=53.93  Aligned_cols=67  Identities=19%  Similarity=0.144  Sum_probs=46.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +++++|.|. |.+|+.+++.|...|++|++.+|+..   +..+ ..+.     ....     .+.+++.++++  +.|+|
T Consensus       151 gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~---~~~~-~~~~-----g~~~-----~~~~~l~~~l~--~aDiV  213 (287)
T TIGR02853       151 GSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSA---DLAR-ITEM-----GLIP-----FPLNKLEEKVA--EIDIV  213 (287)
T ss_pred             CCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHH---HHHH-HHHC-----CCee-----ecHHHHHHHhc--cCCEE
Confidence            389999995 88999999999999999999986432   2111 1111     1111     12455666666  78999


Q ss_pred             EEcc
Q 024488          150 MHFA  153 (267)
Q Consensus       150 i~~A  153 (267)
                      ||+.
T Consensus       214 int~  217 (287)
T TIGR02853       214 INTI  217 (287)
T ss_pred             EECC
Confidence            9976

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=96.63  E-value=0.0073  Score=51.82  Aligned_cols=69  Identities=22%  Similarity=0.306  Sum_probs=54.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      ++|++.| ||=+|++++.++.+.|.+|+.+||.....  +.+.         .-.-+..|..|.+.+++++++.++|.+|
T Consensus        13 ~kvmLLG-SGELGKEvaIe~QRLG~eViAVDrY~~AP--AmqV---------Ahrs~Vi~MlD~~al~avv~rekPd~IV   80 (394)
T COG0027          13 TKVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAP--AMQV---------AHRSYVIDMLDGDALRAVVEREKPDYIV   80 (394)
T ss_pred             eEEEEec-CCccchHHHHHHHhcCCEEEEecCcCCCh--hhhh---------hhheeeeeccCHHHHHHHHHhhCCCeee
Confidence            6788888 89999999999999999999999865432  1111         1123567999999999999988888876


Q ss_pred             E
Q 024488          151 H  151 (267)
Q Consensus       151 ~  151 (267)
                      -
T Consensus        81 p   81 (394)
T COG0027          81 P   81 (394)
T ss_pred             e
Confidence            5

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.63  E-value=0.0051  Score=52.97  Aligned_cols=74  Identities=16%  Similarity=0.192  Sum_probs=48.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHH---HHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---AVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~v~~~~~~~~~D  147 (267)
                      ++++|+|++|++|..+++.+...|++|+++++...   . .+.+++.   +.. .  ..|..+.+   .+.+.....++|
T Consensus       141 ~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~---~-~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~~~~~d  210 (323)
T cd05276         141 ETVLIHGGASGVGTAAIQLAKALGARVIATAGSEE---K-LEACRAL---GAD-V--AINYRTEDFAEEVKEATGGRGVD  210 (323)
T ss_pred             CEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHH---H-HHHHHHc---CCC-E--EEeCCchhHHHHHHHHhCCCCeE
Confidence            79999999999999999999999999998875321   1 2222222   111 1  12333322   233333334799


Q ss_pred             EEEEccc
Q 024488          148 AVMHFAA  154 (267)
Q Consensus       148 ~li~~Ag  154 (267)
                      .+++++|
T Consensus       211 ~vi~~~g  217 (323)
T cd05276         211 VILDMVG  217 (323)
T ss_pred             EEEECCc
Confidence            9999987

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=96.62  E-value=0.038  Score=46.89  Aligned_cols=112  Identities=19%  Similarity=0.157  Sum_probs=69.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeE---EEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRV---TIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V---~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (267)
                      +-+|.|.||+||||+.|...|. ....|   .+.|.  .+.......+..+   ..+.  .....+-.++++.+++  +.
T Consensus        28 ~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi--~~~~GVaaDlSHI---~T~s--~V~g~~g~~~L~~al~--~a   97 (345)
T KOG1494|consen   28 GLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDI--ANTPGVAADLSHI---NTNS--SVVGFTGADGLENALK--GA   97 (345)
T ss_pred             cceEEEEecCCccCccHHHHHh-cCcccceeeeeec--ccCCccccccccc---CCCC--ceeccCChhHHHHHhc--CC
Confidence            4789999999999999987655 44433   33232  1222221111111   1111  1233445678888888  88


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEE
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIY  193 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~  193 (267)
                      |+||--||+..  ....+.++.|..|....+.+..++.+.-....|+
T Consensus        98 dvVvIPAGVPR--KPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~  142 (345)
T KOG1494|consen   98 DVVVIPAGVPR--KPGMTRDDLFNINAGIVKTLAAAIAKCCPNALIL  142 (345)
T ss_pred             CEEEecCCCCC--CCCCcHHHhhhcchHHHHHHHHHHHhhCccceeE
Confidence            99999999853  3344567788888888777777777665444443

>PRK08328 hypothetical protein; Provisional

Probab=96.62  E-value=0.037  Score=46.24  Aligned_cols=31  Identities=32%  Similarity=0.503  Sum_probs=27.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEec
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDN  102 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r  102 (267)
                      .+|+|.| .||+|.++++.|+..|. +++++|.
T Consensus        28 ~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~   59 (231)
T PRK08328         28 AKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDE   59 (231)
T ss_pred             CcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            7899998 79999999999999996 7888874

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.60  E-value=0.027  Score=50.25  Aligned_cols=78  Identities=21%  Similarity=0.163  Sum_probs=50.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchh-------------------hhhhhcCCCCCceEEEEcc
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAV-------------------KVLQELFPEPGRLQFIYAD  130 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~D  130 (267)
                      .+|+|.| .||+|.++++.|+..|. +++++|...-...++.                   +.++++- ..-+++.+...
T Consensus        29 ~~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~n-p~v~v~~~~~~  106 (355)
T PRK05597         29 AKVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALN-PDVKVTVSVRR  106 (355)
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHC-CCcEEEEEEee
Confidence            7899998 59999999999999996 7888875431111111                   1222221 12245555566


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEcc
Q 024488          131 LGDAKAVNKFFSENAFDAVMHFA  153 (267)
Q Consensus       131 l~d~~~v~~~~~~~~~D~li~~A  153 (267)
                      ++. +...++++  +.|+||.+.
T Consensus       107 i~~-~~~~~~~~--~~DvVvd~~  126 (355)
T PRK05597        107 LTW-SNALDELR--DADVILDGS  126 (355)
T ss_pred             cCH-HHHHHHHh--CCCEEEECC
Confidence            653 44555666  789999876

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=96.58  E-value=0.016  Score=51.42  Aligned_cols=33  Identities=24%  Similarity=0.421  Sum_probs=28.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC-CCeEEEEec
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDN  102 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~-G~~V~~~~r  102 (267)
                      |++|.|.||||.+|+++++.|.+. +++++.+.+
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~   35 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTS   35 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEEC
Confidence            478999999999999999999987 678877664

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.55  E-value=0.061  Score=41.22  Aligned_cols=106  Identities=18%  Similarity=0.219  Sum_probs=60.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcch-------------------hhhhhhcCCCCCceEEEEccC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGA-------------------VKVLQELFPEPGRLQFIYADL  131 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~Dl  131 (267)
                      +|+|.| .|++|.++++.|+..|. +++++|...-...++                   .+.++++. ..-+++.+..++
T Consensus         1 ~VliiG-~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~-p~v~i~~~~~~~   78 (143)
T cd01483           1 RVLLVG-LGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELN-PGVNVTAVPEGI   78 (143)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHC-CCcEEEEEeeec
Confidence            478888 59999999999999997 788887542111111                   11122221 122445555555


Q ss_pred             CCHHHHHHHhhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccc
Q 024488          132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATY  200 (267)
Q Consensus       132 ~d~~~v~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~  200 (267)
                      .+.. ....++  +.|++|.+...                 ......+.+.+++.+ ..+|..++....
T Consensus        79 ~~~~-~~~~~~--~~diVi~~~d~-----------------~~~~~~l~~~~~~~~-i~~i~~~~~g~~  126 (143)
T cd01483          79 SEDN-LDDFLD--GVDLVIDAIDN-----------------IAVRRALNRACKELG-IPVIDAGGLGLG  126 (143)
T ss_pred             Chhh-HHHHhc--CCCEEEECCCC-----------------HHHHHHHHHHHHHcC-CCEEEEcCCCcE
Confidence            4433 244555  67888877531                 112233455666655 356666665443

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.53  E-value=0.025  Score=50.86  Aligned_cols=34  Identities=29%  Similarity=0.524  Sum_probs=31.6

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r  102 (267)
                      .+++|.|.||.|.+|..+++.|.+.|++|+++++
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~  130 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQ  130 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCC
Confidence            4588999999999999999999999999999986

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.52  E-value=0.0091  Score=52.09  Aligned_cols=73  Identities=19%  Similarity=0.194  Sum_probs=46.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH---HHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~D  147 (267)
                      .+|+|+||+|++|..+++.+...|++|+++.++..    ..+.++++   +.. .++  |-.+.   +.+.++.. .++|
T Consensus       145 ~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~----~~~~l~~~---Ga~-~vi--~~~~~~~~~~v~~~~~-~gvd  213 (329)
T cd08294         145 ETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDD----KVAWLKEL---GFD-AVF--NYKTVSLEEALKEAAP-DGID  213 (329)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHc---CCC-EEE--eCCCccHHHHHHHHCC-CCcE
Confidence            89999999999999998888889999988874332    12223332   211 122  22222   23333332 4699


Q ss_pred             EEEEccc
Q 024488          148 AVMHFAA  154 (267)
Q Consensus       148 ~li~~Ag  154 (267)
                      +++++.|
T Consensus       214 ~vld~~g  220 (329)
T cd08294         214 CYFDNVG  220 (329)
T ss_pred             EEEECCC
Confidence            9999876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.49  E-value=0.025  Score=50.33  Aligned_cols=34  Identities=21%  Similarity=0.297  Sum_probs=28.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNL  103 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~  103 (267)
                      +.+|.|+||+|++|+++++.|.+... +++.+.++
T Consensus         3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s   37 (349)
T PRK08664          3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAAS   37 (349)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcC
Confidence            37899999999999999999998754 88887443

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.48  E-value=0.01  Score=54.58  Aligned_cols=75  Identities=25%  Similarity=0.302  Sum_probs=54.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +++++|.|+ |.+|+.+++.|.+.|++|+++++++.   .. +.+.+.   ...+.++.+|.++.+.++++-- .+.|.+
T Consensus       231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~---~~-~~~~~~---~~~~~~i~gd~~~~~~L~~~~~-~~a~~v  301 (453)
T PRK09496        231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPE---RA-EELAEE---LPNTLVLHGDGTDQELLEEEGI-DEADAF  301 (453)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHH---HH-HHHHHH---CCCCeEEECCCCCHHHHHhcCC-ccCCEE
Confidence            489999996 99999999999999999999985432   22 222221   2356788999999988865432 267888


Q ss_pred             EEcc
Q 024488          150 MHFA  153 (267)
Q Consensus       150 i~~A  153 (267)
                      |-+.
T Consensus       302 i~~~  305 (453)
T PRK09496        302 IALT  305 (453)
T ss_pred             EECC
Confidence            7543

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.48  E-value=0.014  Score=46.23  Aligned_cols=33  Identities=27%  Similarity=0.367  Sum_probs=29.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r  102 (267)
                      +++|+|.|++..+|..+++.|.++|++|+++.|
T Consensus        44 gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r   76 (168)
T cd01080          44 GKKVVVVGRSNIVGKPLAALLLNRNATVTVCHS   76 (168)
T ss_pred             CCEEEEECCcHHHHHHHHHHHhhCCCEEEEEEC
Confidence            399999998666899999999999999988875

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=96.47  E-value=0.09  Score=45.75  Aligned_cols=109  Identities=18%  Similarity=0.223  Sum_probs=69.5

Q ss_pred             EcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCC-CCceEEEEccCCCHHHHHHHhhcCCCCEEEEc
Q 024488           76 TGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSENAFDAVMHF  152 (267)
Q Consensus        76 TGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li~~  152 (267)
                      .| +|.+|..++..|+..+.  +++++|......+.....+...... ...+.+. .  .+.++++      +.|+||-.
T Consensus         2 IG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~-~--~~~~~~~------daDivVit   71 (299)
T TIGR01771         2 IG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR-S--GDYSDCK------DADLVVIT   71 (299)
T ss_pred             CC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe-c--CCHHHHC------CCCEEEEC
Confidence            45 59999999999998874  7999996443333332233332111 1223222 2  3444333      78999999


Q ss_pred             cccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEec
Q 024488          153 AAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSST  196 (267)
Q Consensus       153 Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vSS  196 (267)
                      ||....  ...+..+.+..|....+.+.+.+.+.+. +.++.+|-
T Consensus        72 ag~~rk--~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN  114 (299)
T TIGR01771        72 AGAPQK--PGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATN  114 (299)
T ss_pred             CCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            997532  2345678888999999999999888764 34555553

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.47  E-value=0.023  Score=46.39  Aligned_cols=77  Identities=19%  Similarity=0.276  Sum_probs=49.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecC---CCCCcch---------------hhhhhhcCCCCCceEEEEccC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNL---SRGNIGA---------------VKVLQELFPEPGRLQFIYADL  131 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~---~~~~~~~---------------~~~~~~~~~~~~~~~~~~~Dl  131 (267)
                      ++|+|.| .|++|..++..|++.|. +++++|..   ..+..+.               .+.+.++. ...+++.+..++
T Consensus        22 ~~V~IvG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~in-p~~~i~~~~~~i   99 (200)
T TIGR02354        22 ATVAICG-LGGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEIN-PYTEIEAYDEKI   99 (200)
T ss_pred             CcEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHC-CCCEEEEeeeeC
Confidence            7899999 58999999999999998 79999875   2221110               01111111 112455555566


Q ss_pred             CCHHHHHHHhhcCCCCEEEEc
Q 024488          132 GDAKAVNKFFSENAFDAVMHF  152 (267)
Q Consensus       132 ~d~~~v~~~~~~~~~D~li~~  152 (267)
                      + .+.+.++++  ++|+||-+
T Consensus       100 ~-~~~~~~~~~--~~DlVi~a  117 (200)
T TIGR02354       100 T-EENIDKFFK--DADIVCEA  117 (200)
T ss_pred             C-HhHHHHHhc--CCCEEEEC
Confidence            4 455666666  67888876

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.45  E-value=0.0069  Score=55.05  Aligned_cols=72  Identities=13%  Similarity=0.127  Sum_probs=48.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +++|+|.|+ |++|+.+++.|.+.|. +++++.|+.   +++.+..++..    ...     +...+++...+.  ..|+
T Consensus       181 ~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~---~ra~~La~~~~----~~~-----~~~~~~l~~~l~--~aDi  245 (414)
T PRK13940        181 SKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTI---EKAQKITSAFR----NAS-----AHYLSELPQLIK--KADI  245 (414)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCH---HHHHHHHHHhc----CCe-----EecHHHHHHHhc--cCCE
Confidence            389999995 9999999999999995 688877643   33333323221    111     223355566666  6799


Q ss_pred             EEEccccC
Q 024488          149 VMHFAAVA  156 (267)
Q Consensus       149 li~~Ag~~  156 (267)
                      ||++.+..
T Consensus       246 VI~aT~a~  253 (414)
T PRK13940        246 IIAAVNVL  253 (414)
T ss_pred             EEECcCCC
Confidence            99987753

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.43  E-value=0.0082  Score=52.69  Aligned_cols=72  Identities=15%  Similarity=0.099  Sum_probs=49.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +++|+|+|+. |+|...++.+.+.|++|+++++++++.+    ..+++   +. -++  .|-+|.+..+.+.+  .+|++
T Consensus       167 G~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e----~a~~l---GA-d~~--i~~~~~~~~~~~~~--~~d~i  233 (339)
T COG1064         167 GKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLE----LAKKL---GA-DHV--INSSDSDALEAVKE--IADAI  233 (339)
T ss_pred             CCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHH----HHHHh---CC-cEE--EEcCCchhhHHhHh--hCcEE
Confidence            4999999976 9999888777779999999997654332    22333   11 122  23335555555554  38999


Q ss_pred             EEccc
Q 024488          150 MHFAA  154 (267)
Q Consensus       150 i~~Ag  154 (267)
                      |+.++
T Consensus       234 i~tv~  238 (339)
T COG1064         234 IDTVG  238 (339)
T ss_pred             EECCC
Confidence            99986

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.43  E-value=0.0096  Score=51.87  Aligned_cols=33  Identities=36%  Similarity=0.342  Sum_probs=30.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      .+++|+||+|.+|..+++.+.+.|++|+++.++
T Consensus       164 ~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~  196 (332)
T cd08259         164 DTVLVTGAGGGVGIHAIQLAKALGARVIAVTRS  196 (332)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCC
Confidence            789999999999999999999999999988753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.41  E-value=0.0071  Score=52.52  Aligned_cols=66  Identities=21%  Similarity=0.182  Sum_probs=46.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      ++|+|.|. |.+|+.++..|.+.|++|++++|+...    .+..+..   +  ..++     +.+++.+.++  +.|+||
T Consensus       153 ~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~----~~~~~~~---G--~~~~-----~~~~l~~~l~--~aDiVI  215 (296)
T PRK08306        153 SNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH----LARITEM---G--LSPF-----HLSELAEEVG--KIDIIF  215 (296)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH----HHHHHHc---C--Ceee-----cHHHHHHHhC--CCCEEE
Confidence            89999995 889999999999999999999875321    1112221   1  2221     2345566666  789999


Q ss_pred             Ecc
Q 024488          151 HFA  153 (267)
Q Consensus       151 ~~A  153 (267)
                      |++
T Consensus       216 ~t~  218 (296)
T PRK08306        216 NTI  218 (296)
T ss_pred             ECC
Confidence            975

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.41  E-value=0.0081  Score=40.47  Aligned_cols=32  Identities=25%  Similarity=0.199  Sum_probs=22.2

Q ss_pred             CCcEEEEEcCCChhHHH--HHHHHHhCCCeEEEEe
Q 024488           69 GVTHVLVTGGAGYIGSH--AALRLLKDSYRVTIVD  101 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~--la~~L~~~G~~V~~~~  101 (267)
                      +.|+|||+|+|.|.|.+  ++..+ ..|++.+.+.
T Consensus        38 GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~   71 (78)
T PF12242_consen   38 GPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVS   71 (78)
T ss_dssp             S-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE
T ss_pred             CCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEe
Confidence            34899999999999999  55444 6678887776

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.39  E-value=0.015  Score=51.16  Aligned_cols=34  Identities=15%  Similarity=0.071  Sum_probs=30.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      +.+|+|+||+|++|..+++.+...|++|+.+.++
T Consensus       152 g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~  185 (338)
T cd08295         152 GETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGS  185 (338)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCC
Confidence            3899999999999999998888889999888753

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.38  E-value=0.013  Score=50.55  Aligned_cols=72  Identities=19%  Similarity=0.220  Sum_probs=49.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCC-CHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG-DAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~v~~~~~~~~~D~  148 (267)
                      ++++.|+|+.| ||.--++...+.|++|++++++.++.+++.   +.+   +  ++.+ .|.+ |++.++++.+  -.|.
T Consensus       182 G~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~---~~L---G--Ad~f-v~~~~d~d~~~~~~~--~~dg  249 (360)
T KOG0023|consen  182 GKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAI---KSL---G--ADVF-VDSTEDPDIMKAIMK--TTDG  249 (360)
T ss_pred             CcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHH---Hhc---C--ccee-EEecCCHHHHHHHHH--hhcC
Confidence            49999999877 998777777778999999997655544443   333   2  2222 3555 8888888887  3455


Q ss_pred             EEEcc
Q 024488          149 VMHFA  153 (267)
Q Consensus       149 li~~A  153 (267)
                      ++|.+
T Consensus       250 ~~~~v  254 (360)
T KOG0023|consen  250 GIDTV  254 (360)
T ss_pred             cceee
Confidence            55544

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.37  E-value=0.061  Score=45.24  Aligned_cols=32  Identities=28%  Similarity=0.393  Sum_probs=28.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNL  103 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~  103 (267)
                      .+|+|.| .||+|.++++.|+..|. +++++|..
T Consensus        25 ~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        25 SRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             CcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            7899988 79999999999999995 78888754

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.37  E-value=0.014  Score=50.28  Aligned_cols=33  Identities=30%  Similarity=0.446  Sum_probs=30.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r  102 (267)
                      +|+|+|.|++|-.|+.++..|+++|++|+++.+
T Consensus       159 Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~  191 (283)
T PRK14192        159 GKHAVVVGRSAILGKPMAMMLLNANATVTICHS  191 (283)
T ss_pred             CCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence            389999999888999999999999999998764

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.37  E-value=0.085  Score=42.95  Aligned_cols=107  Identities=21%  Similarity=0.327  Sum_probs=61.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcch-------------------hhhhhhcCCCCCceEEEEcc
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGA-------------------VKVLQELFPEPGRLQFIYAD  130 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~D  130 (267)
                      ++|+|.| .||+|.++++.|+..|. +++++|...-...++                   .+.++++-+ .-+++.+...
T Consensus        22 s~VlIiG-~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp-~v~i~~~~~~   99 (197)
T cd01492          22 ARILLIG-LKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNP-RVKVSVDTDD   99 (197)
T ss_pred             CcEEEEc-CCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCC-CCEEEEEecC
Confidence            7889987 67799999999999996 688887532211111                   111222211 1244444444


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEecccccc
Q 024488          131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG  201 (267)
Q Consensus       131 l~d~~~v~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g  201 (267)
                      +.+  ...++++  ++|+||.+...                 ......+-+.+.+.+. .+|+.++.+.+|
T Consensus       100 ~~~--~~~~~~~--~~dvVi~~~~~-----------------~~~~~~ln~~c~~~~i-p~i~~~~~G~~G  148 (197)
T cd01492         100 ISE--KPEEFFS--QFDVVVATELS-----------------RAELVKINELCRKLGV-KFYATGVHGLFG  148 (197)
T ss_pred             ccc--cHHHHHh--CCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEEecCCEE
Confidence            542  2344555  67888865321                 1112233455666664 578877777665

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.34  E-value=0.018  Score=42.31  Aligned_cols=70  Identities=26%  Similarity=0.345  Sum_probs=49.0

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEEc
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHF  152 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li~~  152 (267)
                      |+|.|. |-+|+++++.|.+.+.+|+++++.+   +.. +.+.+.     .+.++.+|.+|++.++++-- .+.+.+|-.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~---~~~-~~~~~~-----~~~~i~gd~~~~~~l~~a~i-~~a~~vv~~   69 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDP---ERV-EELREE-----GVEVIYGDATDPEVLERAGI-EKADAVVIL   69 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSH---HHH-HHHHHT-----TSEEEES-TTSHHHHHHTTG-GCESEEEEE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCc---HHH-HHHHhc-----ccccccccchhhhHHhhcCc-cccCEEEEc
Confidence            577785 7899999999999877999998532   222 222221     37789999999999887633 267777765


Q ss_pred             c
Q 024488          153 A  153 (267)
Q Consensus       153 A  153 (267)
                      .
T Consensus        70 ~   70 (116)
T PF02254_consen   70 T   70 (116)
T ss_dssp             S
T ss_pred             c
Confidence            4

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.31  E-value=0.024  Score=51.16  Aligned_cols=72  Identities=18%  Similarity=0.254  Sum_probs=52.9

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +.|+|+|+|+ |.+|+.+++.+.+.|++|++++..+....  ..    .   .  -.++..|..|.+.+.+++++.++|.
T Consensus        11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~--~~----~---a--d~~~~~~~~d~~~l~~~~~~~~id~   78 (395)
T PRK09288         11 SATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPA--MQ----V---A--HRSHVIDMLDGDALRAVIEREKPDY   78 (395)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCch--HH----h---h--hheEECCCCCHHHHHHHHHHhCCCE
Confidence            3378999985 68999999999999999999985432211  00    0   0  0245678889999998888778898


Q ss_pred             EEEc
Q 024488          149 VMHF  152 (267)
Q Consensus       149 li~~  152 (267)
                      |+-.
T Consensus        79 vi~~   82 (395)
T PRK09288         79 IVPE   82 (395)
T ss_pred             EEEe
Confidence            8764

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.31  E-value=0.013  Score=47.79  Aligned_cols=33  Identities=36%  Similarity=0.411  Sum_probs=28.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      ||++.| ||+|-||..++++|++.||+|++-.|+
T Consensus         1 m~~~~i-~GtGniG~alA~~~a~ag~eV~igs~r   33 (211)
T COG2085           1 MMIIAI-IGTGNIGSALALRLAKAGHEVIIGSSR   33 (211)
T ss_pred             CcEEEE-eccChHHHHHHHHHHhCCCeEEEecCC
Confidence            466766 559999999999999999999998653

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.30  E-value=0.013  Score=50.54  Aligned_cols=75  Identities=15%  Similarity=0.097  Sum_probs=46.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      ++|+|.| +||.|++++.+|++.|+ +|+++.|+..   ++.+..++.... ..+  ..  +...+++...+.  ..|+|
T Consensus       126 k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~---ka~~La~~~~~~-~~~--~~--~~~~~~~~~~~~--~~DiV  194 (282)
T TIGR01809       126 FRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPD---KLSRLVDLGVQV-GVI--TR--LEGDSGGLAIEK--AAEVL  194 (282)
T ss_pred             ceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHH---HHHHHHHHhhhc-Ccc--ee--ccchhhhhhccc--CCCEE
Confidence            8899998 59999999999999997 7999886543   333333322111 111  11  112233333333  68999


Q ss_pred             EEccccC
Q 024488          150 MHFAAVA  156 (267)
Q Consensus       150 i~~Ag~~  156 (267)
                      ||+....
T Consensus       195 InaTp~g  201 (282)
T TIGR01809       195 VSTVPAD  201 (282)
T ss_pred             EECCCCC
Confidence            9997654

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=96.27  E-value=0.046  Score=48.60  Aligned_cols=30  Identities=27%  Similarity=0.482  Sum_probs=25.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC-CCeEEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIV  100 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~-G~~V~~~  100 (267)
                      ++|.|.||||.+|.++++.|.+. +++++.+
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l   31 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYL   31 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEE
Confidence            36899999999999999999987 6788844

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.25  E-value=0.027  Score=49.97  Aligned_cols=32  Identities=16%  Similarity=0.132  Sum_probs=29.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r  102 (267)
                      .+|+|+||+|++|..+++.+...|++|+++++
T Consensus       160 ~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~  191 (348)
T PLN03154        160 DSVFVSAASGAVGQLVGQLAKLHGCYVVGSAG  191 (348)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEcC
Confidence            89999999999999999888888999988774

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.23  E-value=0.06  Score=40.37  Aligned_cols=74  Identities=16%  Similarity=0.193  Sum_probs=42.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHh-CCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      ++|.|.|++|-+|+.+++.+.+ .+.+++.......+ +...+.+.++....      ...+.-.++++++++  .+|++
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~-~~~g~d~g~~~~~~------~~~~~v~~~l~~~~~--~~DVv   71 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPS-AKVGKDVGELAGIG------PLGVPVTDDLEELLE--EADVV   71 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTS-TTTTSBCHHHCTSS------T-SSBEBS-HHHHTT--H-SEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCc-ccccchhhhhhCcC------CcccccchhHHHhcc--cCCEE
Confidence            4789999999999999999999 68887766532211 11111111111100      111112255677777  48999


Q ss_pred             EEcc
Q 024488          150 MHFA  153 (267)
Q Consensus       150 i~~A  153 (267)
                      |...
T Consensus        72 IDfT   75 (124)
T PF01113_consen   72 IDFT   75 (124)
T ss_dssp             EEES
T ss_pred             EEcC
Confidence            9865

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=96.23  E-value=0.024  Score=50.88  Aligned_cols=67  Identities=25%  Similarity=0.375  Sum_probs=50.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      |++|+|.|| |.+|+.++..+.+.|++|++++..+...  ..+.         --..+..|..|.+.+.++++  .+|+|
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~p--a~~~---------ad~~~~~~~~D~~~l~~~a~--~~dvi   67 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSP--AAQV---------ADEVIVADYDDVAALRELAE--QCDVI   67 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCc--hhHh---------CceEEecCCCCHHHHHHHHh--cCCEE
Confidence            589999996 7999999999999999999998543221  1111         11345678899999999988  77876


Q ss_pred             E
Q 024488          150 M  150 (267)
Q Consensus       150 i  150 (267)
                      .
T Consensus        68 t   68 (372)
T PRK06019         68 T   68 (372)
T ss_pred             E
Confidence            4

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.22  E-value=0.0099  Score=51.10  Aligned_cols=76  Identities=22%  Similarity=0.305  Sum_probs=47.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +++++|.| +||.+++++.+|++.| .+|+++.|...+.+++.+...+.   +..+.  ..+..+.+..+      ..|+
T Consensus       126 ~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~---~~~~~--~~~~~~~~~~~------~~dl  193 (283)
T COG0169         126 GKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGEL---GAAVE--AAALADLEGLE------EADL  193 (283)
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc---ccccc--ccccccccccc------ccCE
Confidence            38999999 7999999999999999 48999986554444443333322   11111  12222222111      3699


Q ss_pred             EEEccccCC
Q 024488          149 VMHFAAVAY  157 (267)
Q Consensus       149 li~~Ag~~~  157 (267)
                      |||+-....
T Consensus       194 iINaTp~Gm  202 (283)
T COG0169         194 LINATPVGM  202 (283)
T ss_pred             EEECCCCCC
Confidence            999876643

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.21  E-value=0.06  Score=48.29  Aligned_cols=78  Identities=23%  Similarity=0.283  Sum_probs=50.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchh-------------------hhhhhcCCCCCceEEEEcc
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAV-------------------KVLQELFPEPGRLQFIYAD  130 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~D  130 (267)
                      .+|+|.| .||+|.++++.|+..|. +++++|...-...++.                   +.++++. ..-+++.+...
T Consensus        42 ~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~n-p~v~i~~~~~~  119 (370)
T PRK05600         42 ARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQ-PDIRVNALRER  119 (370)
T ss_pred             CcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHC-CCCeeEEeeee
Confidence            7899998 69999999999999996 8888886422211111                   1122221 12245555555


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEcc
Q 024488          131 LGDAKAVNKFFSENAFDAVMHFA  153 (267)
Q Consensus       131 l~d~~~v~~~~~~~~~D~li~~A  153 (267)
                      ++ .+.+.++++  ++|+||.+.
T Consensus       120 i~-~~~~~~~~~--~~DlVid~~  139 (370)
T PRK05600        120 LT-AENAVELLN--GVDLVLDGS  139 (370)
T ss_pred             cC-HHHHHHHHh--CCCEEEECC
Confidence            54 445666776  789998775

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.17  E-value=0.0056  Score=56.75  Aligned_cols=33  Identities=21%  Similarity=0.279  Sum_probs=29.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      +++++|+|+ ||+|++++..|++.|++|++++|+
T Consensus       332 ~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~  364 (477)
T PRK09310        332 NQHVAIVGA-GGAAKAIATTLARAGAELLIFNRT  364 (477)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCC
Confidence            389999995 899999999999999999988854

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.17  E-value=0.046  Score=50.94  Aligned_cols=34  Identities=29%  Similarity=0.157  Sum_probs=30.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      +.+|+|+| .|.+|...+..+...|++|+++|+++
T Consensus       165 g~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~  198 (509)
T PRK09424        165 PAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRP  198 (509)
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            38999999 69999999999999999999998644

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.16  E-value=0.017  Score=49.78  Aligned_cols=74  Identities=18%  Similarity=0.173  Sum_probs=47.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHH---HHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---AVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~v~~~~~~~~~D  147 (267)
                      .+++|+|++|++|..+++.+...|++|+++.++..   . .+.+.+.   +.. ..  .+..+.+   .+.+.....++|
T Consensus       141 ~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~---~-~~~~~~~---g~~-~~--~~~~~~~~~~~~~~~~~~~~~d  210 (325)
T TIGR02824       141 ETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDE---K-CAACEAL---GAD-IA--INYREEDFVEVVKAETGGKGVD  210 (325)
T ss_pred             CEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHH---H-HHHHHHc---CCc-EE--EecCchhHHHHHHHHcCCCCeE
Confidence            79999999999999999999999999998875322   1 1222222   111 11  2222222   233333324699


Q ss_pred             EEEEccc
Q 024488          148 AVMHFAA  154 (267)
Q Consensus       148 ~li~~Ag  154 (267)
                      .+|+++|
T Consensus       211 ~~i~~~~  217 (325)
T TIGR02824       211 VILDIVG  217 (325)
T ss_pred             EEEECCc
Confidence            9999986

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.06  E-value=0.018  Score=48.41  Aligned_cols=99  Identities=17%  Similarity=0.186  Sum_probs=58.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHH--HhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK--FFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~--~~~~~~~D~  148 (267)
                      .+|+|+|+++ +|..+++.+...|.+|++++++...    .+.+++.   +. -..  .|..+.+..+.  ......+|+
T Consensus       136 ~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~----~~~~~~~---g~-~~~--~~~~~~~~~~~~~~~~~~~~d~  204 (271)
T cd05188         136 DTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEK----LELAKEL---GA-DHV--IDYKEEDLEEELRLTGGGGADV  204 (271)
T ss_pred             CEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHH----HHHHHHh---CC-cee--ccCCcCCHHHHHHHhcCCCCCE
Confidence            7899999988 9999999999999999998854321    2222222   11 111  23222222222  223357999


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEecccc
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCAT  199 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~  199 (267)
                      +|++++..                 .....+++.+.  ..+++|.++....
T Consensus       205 vi~~~~~~-----------------~~~~~~~~~l~--~~G~~v~~~~~~~  236 (271)
T cd05188         205 VIDAVGGP-----------------ETLAQALRLLR--PGGRIVVVGGTSG  236 (271)
T ss_pred             EEECCCCH-----------------HHHHHHHHhcc--cCCEEEEEccCCC
Confidence            99998631                 11222344443  3468888887543

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.06  E-value=0.038  Score=47.65  Aligned_cols=77  Identities=21%  Similarity=0.313  Sum_probs=46.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      |+|+|.| +||.|++++-.|++.|+ +|+++.|...   ++.+..+.+....+.......|   ..++.....  ..|+|
T Consensus       128 k~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~---ka~~La~~~~~~~~~~~~~~~~---~~~~~~~~~--~~div  198 (283)
T PRK14027        128 DSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLDTS---RAQALADVINNAVGREAVVGVD---ARGIEDVIA--AADGV  198 (283)
T ss_pred             CeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHH---HHHHHHHHHhhccCcceEEecC---HhHHHHHHh--hcCEE
Confidence            8899999 59999999999999997 7888886443   3333333221111111111122   222232333  57999


Q ss_pred             EEccccC
Q 024488          150 MHFAAVA  156 (267)
Q Consensus       150 i~~Ag~~  156 (267)
                      ||+....
T Consensus       199 INaTp~G  205 (283)
T PRK14027        199 VNATPMG  205 (283)
T ss_pred             EEcCCCC
Confidence            9987654

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.05  E-value=0.02  Score=49.45  Aligned_cols=76  Identities=20%  Similarity=0.156  Sum_probs=47.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH-HHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~D~l  149 (267)
                      ++++|+|++|++|..++..+...|++|++++++..   . .+.+.+.   +. -.++..+..+. +.+.......++|++
T Consensus       146 ~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~---~-~~~~~~~---g~-~~~~~~~~~~~~~~~~~~~~~~~~d~v  217 (328)
T cd08268         146 DSVLITAASSSVGLAAIQIANAAGATVIATTRTSE---K-RDALLAL---GA-AHVIVTDEEDLVAEVLRITGGKGVDVV  217 (328)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHH---H-HHHHHHc---CC-CEEEecCCccHHHHHHHHhCCCCceEE
Confidence            78999999999999999999999999999875332   1 1222222   11 12222222221 223333333469999


Q ss_pred             EEccc
Q 024488          150 MHFAA  154 (267)
Q Consensus       150 i~~Ag  154 (267)
                      +++++
T Consensus       218 i~~~~  222 (328)
T cd08268         218 FDPVG  222 (328)
T ss_pred             EECCc
Confidence            99876

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.05  E-value=0.11  Score=45.44  Aligned_cols=78  Identities=23%  Similarity=0.286  Sum_probs=47.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchh-------------------hhhhhcCCCCCceEEEEccC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAV-------------------KVLQELFPEPGRLQFIYADL  131 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~Dl  131 (267)
                      +|+|.| .||+|.++++.|+..|. +++++|...-...++.                   +.++++- ..-+++.+..++
T Consensus         1 kVlIVG-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lN-p~v~V~~~~~~i   78 (312)
T cd01489           1 KVLVVG-AGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFN-PNVKIVAYHANI   78 (312)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHC-CCCeEEEEeccC
Confidence            478888 59999999999999996 7888875322211111                   1112221 123455566667


Q ss_pred             CCHHHHHHHhhcCCCCEEEEcc
Q 024488          132 GDAKAVNKFFSENAFDAVMHFA  153 (267)
Q Consensus       132 ~d~~~v~~~~~~~~~D~li~~A  153 (267)
                      .+.+...++++  ++|+||++.
T Consensus        79 ~~~~~~~~f~~--~~DvVv~a~   98 (312)
T cd01489          79 KDPDFNVEFFK--QFDLVFNAL   98 (312)
T ss_pred             CCccchHHHHh--cCCEEEECC
Confidence            65433345555  678888764

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.03  E-value=0.032  Score=48.01  Aligned_cols=33  Identities=24%  Similarity=0.350  Sum_probs=30.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r  102 (267)
                      +|+|+|.|+|.-+|+.++..|.++|++|+++.+
T Consensus       158 Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s  190 (286)
T PRK14175        158 GKNAVVIGRSHIVGQPVSKLLLQKNASVTILHS  190 (286)
T ss_pred             CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeC
Confidence            399999999999999999999999999998874

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.02  E-value=0.025  Score=45.29  Aligned_cols=34  Identities=32%  Similarity=0.239  Sum_probs=30.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      +++|.|.| .|.||+++|+.|..-|++|+..+|+.
T Consensus        36 g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~   69 (178)
T PF02826_consen   36 GKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSP   69 (178)
T ss_dssp             TSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSC
T ss_pred             CCEEEEEE-EcCCcCeEeeeeecCCceeEEecccC
Confidence            49999998 79999999999999999999999754

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.90  E-value=0.01  Score=49.10  Aligned_cols=34  Identities=32%  Similarity=0.395  Sum_probs=30.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      ++|.|.||+|.+|..++..|++.|++|++.+|+.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~   34 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDL   34 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCH
Confidence            3688999999999999999999999999988654

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.89  E-value=0.17  Score=43.23  Aligned_cols=32  Identities=34%  Similarity=0.457  Sum_probs=28.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC-CeEEEEecC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNL  103 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G-~~V~~~~r~  103 (267)
                      .+|+|.| .||+|.++++.|+..| -+++++|..
T Consensus        31 s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         31 AHICVVG-IGGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             CCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            7899988 7999999999999999 588888853

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.86  E-value=0.034  Score=48.30  Aligned_cols=74  Identities=12%  Similarity=0.132  Sum_probs=47.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH---HHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~D  147 (267)
                      .+|+|.|++|.+|..+++.+.+.|++|+++.++...    .+.+++.   +.. .++  +..+.   +.+.++....++|
T Consensus       141 ~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~----~~~~~~~---g~~-~~~--~~~~~~~~~~i~~~~~~~~~d  210 (324)
T cd08292         141 QWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAG----VAELRAL---GIG-PVV--STEQPGWQDKVREAAGGAPIS  210 (324)
T ss_pred             CEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHH----HHHHHhc---CCC-EEE--cCCCchHHHHHHHHhCCCCCc
Confidence            799999999999999999999999999888743322    1222222   111 122  22222   2344444334799


Q ss_pred             EEEEccc
Q 024488          148 AVMHFAA  154 (267)
Q Consensus       148 ~li~~Ag  154 (267)
                      ++++++|
T Consensus       211 ~v~d~~g  217 (324)
T cd08292         211 VALDSVG  217 (324)
T ss_pred             EEEECCC
Confidence            9999887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=95.85  E-value=0.033  Score=50.91  Aligned_cols=70  Identities=20%  Similarity=0.271  Sum_probs=46.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +++|+|.|+ |.+|+.+++.|...|+ +|++++|+.   +++.+..+++   +.       ++.+.+++.+.+.  +.|+
T Consensus       182 ~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~---~ra~~la~~~---g~-------~~~~~~~~~~~l~--~aDv  245 (423)
T PRK00045        182 GKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTL---ERAEELAEEF---GG-------EAIPLDELPEALA--EADI  245 (423)
T ss_pred             CCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCH---HHHHHHHHHc---CC-------cEeeHHHHHHHhc--cCCE
Confidence            489999985 9999999999999997 788888643   2222222222   11       1223345555555  6799


Q ss_pred             EEEcccc
Q 024488          149 VMHFAAV  155 (267)
Q Consensus       149 li~~Ag~  155 (267)
                      ||.+.+.
T Consensus       246 VI~aT~s  252 (423)
T PRK00045        246 VISSTGA  252 (423)
T ss_pred             EEECCCC
Confidence            9988654

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=95.84  E-value=0.081  Score=46.89  Aligned_cols=27  Identities=19%  Similarity=0.406  Sum_probs=23.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEE
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVT   98 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~   98 (267)
                      +|.|.||||++|+++++.|.++++.++
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~   27 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPID   27 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChh
Confidence            478999999999999999999888643

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.82  E-value=0.028  Score=49.37  Aligned_cols=74  Identities=19%  Similarity=0.213  Sum_probs=46.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC--HHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~D  147 (267)
                      .+|+|+|+ |++|..++..+...|++ |++++++..   + .+.++++   +.. .+  .|..+  .+.+.++....++|
T Consensus       165 ~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~---~-~~~~~~~---ga~-~~--i~~~~~~~~~~~~~~~~~~~d  233 (339)
T cd08239         165 DTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPE---R-LELAKAL---GAD-FV--INSGQDDVQEIRELTSGAGAD  233 (339)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH---H-HHHHHHh---CCC-EE--EcCCcchHHHHHHHhCCCCCC
Confidence            89999985 99999999988889998 888774322   1 2222333   111 11  23333  33444444334799


Q ss_pred             EEEEcccc
Q 024488          148 AVMHFAAV  155 (267)
Q Consensus       148 ~li~~Ag~  155 (267)
                      ++|.+.|.
T Consensus       234 ~vid~~g~  241 (339)
T cd08239         234 VAIECSGN  241 (339)
T ss_pred             EEEECCCC
Confidence            99998873

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.81  E-value=0.029  Score=48.83  Aligned_cols=73  Identities=21%  Similarity=0.297  Sum_probs=46.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC--HHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~D~  148 (267)
                      .+|+|.|++|.+|..+++.+.+.|++|++++++..+    .+.++++   +.. .+  .|..+  .+.+.++ ...++|+
T Consensus       148 ~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~----~~~~~~~---g~~-~v--~~~~~~~~~~~~~~-~~~~~d~  216 (326)
T cd08289         148 GPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADA----ADYLKKL---GAK-EV--IPREELQEESIKPL-EKQRWAG  216 (326)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHH----HHHHHHc---CCC-EE--EcchhHHHHHHHhh-ccCCcCE
Confidence            799999999999999999999999999988754322    2222332   111 11  12222  2333333 2346899


Q ss_pred             EEEccc
Q 024488          149 VMHFAA  154 (267)
Q Consensus       149 li~~Ag  154 (267)
                      ++++.|
T Consensus       217 vld~~g  222 (326)
T cd08289         217 AVDPVG  222 (326)
T ss_pred             EEECCc
Confidence            998876

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.78  E-value=0.034  Score=50.76  Aligned_cols=70  Identities=20%  Similarity=0.345  Sum_probs=46.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +++|+|.|+ |.+|..+++.|.+.| .+|++++|+..   .+.+..++.   +.  ..+     +.+++.+.+.  +.|+
T Consensus       180 ~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~---ra~~la~~~---g~--~~i-----~~~~l~~~l~--~aDv  243 (417)
T TIGR01035       180 GKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYE---RAEDLAKEL---GG--EAV-----KFEDLEEYLA--EADI  243 (417)
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHH---HHHHHHHHc---CC--eEe-----eHHHHHHHHh--hCCE
Confidence            389999995 999999999999999 78999886432   222222222   11  112     2245556665  6799


Q ss_pred             EEEcccc
Q 024488          149 VMHFAAV  155 (267)
Q Consensus       149 li~~Ag~  155 (267)
                      ||.+.+.
T Consensus       244 Vi~aT~s  250 (417)
T TIGR01035       244 VISSTGA  250 (417)
T ss_pred             EEECCCC
Confidence            9988654

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.75  E-value=0.05  Score=48.12  Aligned_cols=28  Identities=21%  Similarity=0.349  Sum_probs=24.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRV   97 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V   97 (267)
                      |.+|.|+||||.+|.++++.|.++++.+
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~   31 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPV   31 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCc
Confidence            3689999999999999999999877643

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.75  E-value=0.042  Score=47.70  Aligned_cols=74  Identities=18%  Similarity=0.125  Sum_probs=47.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHH---HHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---AVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~v~~~~~~~~~D  147 (267)
                      .+++|+|++|.+|..++..+...|++|+.+++....    .+.+++.   +.. .++  |..+.+   .+.+.....++|
T Consensus       144 ~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~----~~~~~~~---g~~-~~~--~~~~~~~~~~~~~~~~~~~~d  213 (324)
T cd08244         144 DVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAK----TALVRAL---GAD-VAV--DYTRPDWPDQVREALGGGGVT  213 (324)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHc---CCC-EEE--ecCCccHHHHHHHHcCCCCce
Confidence            789999999999999999999999999988753322    1222322   111 122  322322   333333324699


Q ss_pred             EEEEccc
Q 024488          148 AVMHFAA  154 (267)
Q Consensus       148 ~li~~Ag  154 (267)
                      .++++.|
T Consensus       214 ~vl~~~g  220 (324)
T cd08244         214 VVLDGVG  220 (324)
T ss_pred             EEEECCC
Confidence            9999876

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK04148 hypothetical protein; Provisional

Probab=95.73  E-value=0.012  Score=44.57  Aligned_cols=66  Identities=18%  Similarity=0.268  Sum_probs=45.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      +++++.|. | -|.++|..|.+.|++|+++|.++.    ..+..++.     .+.++.+|+.+++-  ++-+  +.|.++
T Consensus        18 ~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~----aV~~a~~~-----~~~~v~dDlf~p~~--~~y~--~a~liy   82 (134)
T PRK04148         18 KKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEK----AVEKAKKL-----GLNAFVDDLFNPNL--EIYK--NAKLIY   82 (134)
T ss_pred             CEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHH----HHHHHHHh-----CCeEEECcCCCCCH--HHHh--cCCEEE
Confidence            67999994 4 889999999999999999996543    22222221     46789999987652  1122  567766


Q ss_pred             E
Q 024488          151 H  151 (267)
Q Consensus       151 ~  151 (267)
                      .
T Consensus        83 s   83 (134)
T PRK04148         83 S   83 (134)
T ss_pred             E
Confidence            4

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.70  E-value=0.02  Score=45.08  Aligned_cols=34  Identities=32%  Similarity=0.454  Sum_probs=28.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      |++|-+.| .|-+|+.+++.|++.|++|++.+|+.
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~   34 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSP   34 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSH
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccch
Confidence            68899999 69999999999999999999999654

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=95.68  E-value=0.054  Score=48.59  Aligned_cols=69  Identities=19%  Similarity=0.270  Sum_probs=51.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEE
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH  151 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li~  151 (267)
                      +|+|.| +|.+|..+++.+.+.|++|++++.++...  ..+    .   .  -..+..|..|.+.+.+++++.++|+|+-
T Consensus         1 kililG-~g~~~~~l~~aa~~~G~~v~~~d~~~~~~--~~~----~---a--d~~~~~~~~d~~~l~~~~~~~~id~v~~   68 (380)
T TIGR01142         1 RVLLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAP--AMQ----V---A--HRSYVINMLDGDALRAVIEREKPDYIVP   68 (380)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCEEEEEeCCCCCc--hhh----h---C--ceEEEcCCCCHHHHHHHHHHhCCCEEEe
Confidence            588999 58999999999999999999998643221  111    1   0  1345678889999999988778999885


Q ss_pred             c
Q 024488          152 F  152 (267)
Q Consensus       152 ~  152 (267)
                      .
T Consensus        69 ~   69 (380)
T TIGR01142        69 E   69 (380)
T ss_pred             c
Confidence            4

This enzyme is an alternative to PurN (TIGR00639)

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=95.66  E-value=0.22  Score=41.75  Aligned_cols=31  Identities=29%  Similarity=0.437  Sum_probs=26.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEecC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNL  103 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~  103 (267)
                      +|+|.| .||+|.++++.|+..|. +++++|..
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D   32 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMD   32 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            478888 79999999999999996 78888753

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.63  E-value=0.042  Score=47.25  Aligned_cols=76  Identities=21%  Similarity=0.162  Sum_probs=48.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC-HHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~D~l  149 (267)
                      .+++|+|++|.+|..++..+...|++|+.++++...    .+.+.+.   +.. ..+..+-.+ .+.+.......++|.+
T Consensus       141 ~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~----~~~~~~~---g~~-~~~~~~~~~~~~~i~~~~~~~~~d~v  212 (323)
T cd08241         141 ETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEK----LALARAL---GAD-HVIDYRDPDLRERVKALTGGRGVDVV  212 (323)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHH----HHHHHHc---CCc-eeeecCCccHHHHHHHHcCCCCcEEE
Confidence            799999999999999999999999999988753321    1222222   111 122222112 2334444443469999


Q ss_pred             EEccc
Q 024488          150 MHFAA  154 (267)
Q Consensus       150 i~~Ag  154 (267)
                      +++.|
T Consensus       213 ~~~~g  217 (323)
T cd08241         213 YDPVG  217 (323)
T ss_pred             EECcc
Confidence            99876

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=95.60  E-value=0.059  Score=46.96  Aligned_cols=33  Identities=24%  Similarity=0.179  Sum_probs=30.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      .+|+|.|++|.+|..+++.+.+.|++|+.++++
T Consensus       147 ~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~  179 (329)
T cd05288         147 ETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGS  179 (329)
T ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Confidence            799999999999999999999999999888753

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.57  E-value=0.034  Score=51.00  Aligned_cols=34  Identities=21%  Similarity=0.349  Sum_probs=30.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      ++|.|.||+|.+|..+++.|.+.|++|++++|+.
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~   34 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDP   34 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence            3689999999999999999999999999999643

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=95.56  E-value=0.05  Score=47.50  Aligned_cols=76  Identities=12%  Similarity=0.124  Sum_probs=45.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC-HHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~D~l  149 (267)
                      ..++++||+|++|..++..+...|++|++++++..+    .+.++++   +.. .++..+-.+ .+.+.++....++|++
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~----~~~~~~~---g~~-~~i~~~~~~~~~~v~~~~~~~~~d~v  216 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQ----VDLLKKI---GAE-YVLNSSDPDFLEDLKELIAKLNATIF  216 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHc---CCc-EEEECCCccHHHHHHHHhCCCCCcEE
Confidence            555666999999999988888889999888753321    2222332   211 222222112 2334444433479999


Q ss_pred             EEccc
Q 024488          150 MHFAA  154 (267)
Q Consensus       150 i~~Ag  154 (267)
                      |++.|
T Consensus       217 id~~g  221 (324)
T cd08291         217 FDAVG  221 (324)
T ss_pred             EECCC
Confidence            99876

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.55  E-value=0.026  Score=53.47  Aligned_cols=71  Identities=14%  Similarity=0.248  Sum_probs=51.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      .+++|.| .|-+|++++++|.++|++|++++.++   +.. +.+++     .....+.+|.+|++.++++-- .+.|.++
T Consensus       418 ~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~---~~~-~~~~~-----~g~~~i~GD~~~~~~L~~a~i-~~a~~vi  486 (558)
T PRK10669        418 NHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSR---TRV-DELRE-----RGIRAVLGNAANEEIMQLAHL-DCARWLL  486 (558)
T ss_pred             CCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCH---HHH-HHHHH-----CCCeEEEcCCCCHHHHHhcCc-cccCEEE
Confidence            5788888 78999999999999999999999432   222 22222     257789999999988776432 2567665


Q ss_pred             Ec
Q 024488          151 HF  152 (267)
Q Consensus       151 ~~  152 (267)
                      -.
T Consensus       487 v~  488 (558)
T PRK10669        487 LT  488 (558)
T ss_pred             EE
Confidence            44

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.51  E-value=0.27  Score=41.07  Aligned_cols=32  Identities=38%  Similarity=0.506  Sum_probs=28.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNL  103 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~  103 (267)
                      .+|+|.| .||+|.++++.|+..|. +++++|..
T Consensus        12 ~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755          12 AHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            7899998 79999999999999996 88888753

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=95.51  E-value=0.49  Score=40.00  Aligned_cols=72  Identities=15%  Similarity=0.193  Sum_probs=55.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      |++|+|.|||+ =|+.+++.|.+.|+.|++..-....   .       .. ...+....+-+.|.+++.+++++.+++.|
T Consensus         2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g---~-------~~-~~~~~v~~G~l~~~~~l~~~l~~~~i~~V   69 (248)
T PRK08057          2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTG---G-------PA-DLPGPVRVGGFGGAEGLAAYLREEGIDLV   69 (248)
T ss_pred             CceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCC---C-------cc-cCCceEEECCCCCHHHHHHHHHHCCCCEE
Confidence            47899999884 5999999999999988876632211   1       01 12456677788799999999999899999


Q ss_pred             EEcc
Q 024488          150 MHFA  153 (267)
Q Consensus       150 i~~A  153 (267)
                      |...
T Consensus        70 IDAT   73 (248)
T PRK08057         70 IDAT   73 (248)
T ss_pred             EECC
Confidence            9875

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=95.51  E-value=0.16  Score=43.74  Aligned_cols=104  Identities=17%  Similarity=0.158  Sum_probs=62.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---CCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~~~  146 (267)
                      +.+|+|++|+|.+|+-..+-..-+|++|+.+.-   ..+ ..+.+.+......-     .|-.+. ++.+.+++   .++
T Consensus       151 GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaG---g~e-K~~~l~~~lGfD~~-----idyk~~-d~~~~L~~a~P~GI  220 (340)
T COG2130         151 GETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAG---GAE-KCDFLTEELGFDAG-----IDYKAE-DFAQALKEACPKGI  220 (340)
T ss_pred             CCEEEEEecccccchHHHHHHHhhCCeEEEecC---CHH-HHHHHHHhcCCcee-----eecCcc-cHHHHHHHHCCCCe
Confidence            499999999999998766555567999999872   222 22333331111111     222222 33333333   589


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCC
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP  203 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~  203 (267)
                      |+.|-|.|-.                  ..-.+++.|..  ..||+..+-.+.|...
T Consensus       221 DvyfeNVGg~------------------v~DAv~~~ln~--~aRi~~CG~IS~YN~~  257 (340)
T COG2130         221 DVYFENVGGE------------------VLDAVLPLLNL--FARIPVCGAISQYNAP  257 (340)
T ss_pred             EEEEEcCCch------------------HHHHHHHhhcc--ccceeeeeehhhcCCC
Confidence            9999998832                  11123344433  3589988888888643

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.47  E-value=0.068  Score=47.43  Aligned_cols=74  Identities=22%  Similarity=0.337  Sum_probs=45.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      .+|+|+|+ |++|...+..+...|++|++++++..+.+ ..+.++++   +  +..+  |..+. ++.+.....++|++|
T Consensus       174 ~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~-~~~~~~~~---G--a~~v--~~~~~-~~~~~~~~~~~d~vi  243 (355)
T cd08230         174 RRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDP-KADIVEEL---G--ATYV--NSSKT-PVAEVKLVGEFDLII  243 (355)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHH-HHHHHHHc---C--CEEe--cCCcc-chhhhhhcCCCCEEE
Confidence            78999985 99999999888888999999886422222 22233333   2  2222  32221 111111124789999


Q ss_pred             Eccc
Q 024488          151 HFAA  154 (267)
Q Consensus       151 ~~Ag  154 (267)
                      .++|
T Consensus       244 d~~g  247 (355)
T cd08230         244 EATG  247 (355)
T ss_pred             ECcC
Confidence            9987

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=95.47  E-value=0.15  Score=46.23  Aligned_cols=32  Identities=38%  Similarity=0.418  Sum_probs=28.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNL  103 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~  103 (267)
                      .+|+|.| .||+|.++++.|+..|. +++++|..
T Consensus        43 ~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D   75 (392)
T PRK07878         43 ARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFD   75 (392)
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCC
Confidence            7899998 79999999999999996 78888753

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.46  E-value=0.042  Score=45.81  Aligned_cols=32  Identities=25%  Similarity=0.417  Sum_probs=29.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC---eEEEEecC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY---RVTIVDNL  103 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~---~V~~~~r~  103 (267)
                      ++++|.|| |+.|+.++.+|.+.|.   +|++++|.
T Consensus        26 ~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          26 VKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            88999995 9999999999999997   59999986

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.42  E-value=0.054  Score=47.39  Aligned_cols=70  Identities=24%  Similarity=0.284  Sum_probs=46.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +++|+|.|+ |.+|+.+++.|...| .+|++++|+.   ++..+..+++   +.  .     ..+.+++.+.+.  ..|+
T Consensus       178 ~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~---~ra~~la~~~---g~--~-----~~~~~~~~~~l~--~aDv  241 (311)
T cd05213         178 GKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTY---ERAEELAKEL---GG--N-----AVPLDELLELLN--EADV  241 (311)
T ss_pred             CCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCH---HHHHHHHHHc---CC--e-----EEeHHHHHHHHh--cCCE
Confidence            388999985 999999999999876 6788888643   2222222332   11  1     223345666665  6799


Q ss_pred             EEEcccc
Q 024488          149 VMHFAAV  155 (267)
Q Consensus       149 li~~Ag~  155 (267)
                      ||.+.+.
T Consensus       242 Vi~at~~  248 (311)
T cd05213         242 VISATGA  248 (311)
T ss_pred             EEECCCC
Confidence            9998764

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PLN00203 glutamyl-tRNA reductase

Probab=95.40  E-value=0.034  Score=51.98  Aligned_cols=73  Identities=15%  Similarity=0.206  Sum_probs=47.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      .++|+|.|+ |.+|+.+++.|...|+ +|+++.|+.   +.+.+..++..  +..+.+     ...+++..++.  ..|+
T Consensus       266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~---era~~La~~~~--g~~i~~-----~~~~dl~~al~--~aDV  332 (519)
T PLN00203        266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSE---ERVAALREEFP--DVEIIY-----KPLDEMLACAA--EADV  332 (519)
T ss_pred             CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCH---HHHHHHHHHhC--CCceEe-----ecHhhHHHHHh--cCCE
Confidence            489999996 9999999999999996 788888643   23322222221  111211     23334455555  6799


Q ss_pred             EEEcccc
Q 024488          149 VMHFAAV  155 (267)
Q Consensus       149 li~~Ag~  155 (267)
                      ||.+.+.
T Consensus       333 VIsAT~s  339 (519)
T PLN00203        333 VFTSTSS  339 (519)
T ss_pred             EEEccCC
Confidence            9987653

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.39  E-value=0.029  Score=49.28  Aligned_cols=34  Identities=26%  Similarity=0.273  Sum_probs=30.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~  105 (267)
                      ++|.|.| +|-+|..+|..|+..|++|++.++++.
T Consensus         8 ~~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~~   41 (321)
T PRK07066          8 KTFAAIG-SGVIGSGWVARALAHGLDVVAWDPAPG   41 (321)
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence            6788888 699999999999999999999997543

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=95.38  E-value=0.055  Score=45.98  Aligned_cols=31  Identities=16%  Similarity=0.222  Sum_probs=26.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC-CCeEEEEe
Q 024488           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVD  101 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~-G~~V~~~~  101 (267)
                      .+|.|+|++|.+|+.+++.+.+. +.+++.+.
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~   33 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAV   33 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence            68999999999999999988864 68877754

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=95.37  E-value=0.25  Score=39.95  Aligned_cols=35  Identities=26%  Similarity=0.251  Sum_probs=31.9

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r  102 (267)
                      ..+ |+|+|.|.|.-+|+-++..|+++|++|++++.
T Consensus        60 l~G-K~vvVIGrS~iVGkPla~lL~~~~AtVti~~~   94 (197)
T cd01079          60 LYG-KTITIINRSEVVGRPLAALLANDGARVYSVDI   94 (197)
T ss_pred             CCC-CEEEEECCCccchHHHHHHHHHCCCEEEEEec
Confidence            344 99999999999999999999999999999863

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=95.36  E-value=0.043  Score=48.47  Aligned_cols=73  Identities=16%  Similarity=0.269  Sum_probs=45.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (267)
                      ++|+|+|+ |++|...++.+...|+ +|+++++++.    ..+.++++   +... .  .|..+. ++.+..+. +++|+
T Consensus       171 ~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~----~~~~a~~l---Ga~~-v--i~~~~~-~~~~~~~~~g~~D~  238 (343)
T PRK09880        171 KRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPR----SLSLAREM---GADK-L--VNPQND-DLDHYKAEKGYFDV  238 (343)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHH----HHHHHHHc---CCcE-E--ecCCcc-cHHHHhccCCCCCE
Confidence            78999985 9999999988888898 5888775432    22333333   2111 1  233322 23333332 45899


Q ss_pred             EEEcccc
Q 024488          149 VMHFAAV  155 (267)
Q Consensus       149 li~~Ag~  155 (267)
                      +|.++|.
T Consensus       239 vid~~G~  245 (343)
T PRK09880        239 SFEVSGH  245 (343)
T ss_pred             EEECCCC
Confidence            9999873

>PRK08223 hypothetical protein; Validated

Probab=95.36  E-value=0.1  Score=44.92  Aligned_cols=32  Identities=28%  Similarity=0.355  Sum_probs=28.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNL  103 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~  103 (267)
                      .+|+|.| .||+|.++++.|+..|. +++++|..
T Consensus        28 s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         28 SRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            7899998 78999999999999996 78888753

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.34  E-value=0.058  Score=46.26  Aligned_cols=76  Identities=16%  Similarity=0.048  Sum_probs=47.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH-HHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~D~l  149 (267)
                      .+++|.|++|++|..+++.+...|++|+++.++..   + .+.+.+.   +.. .++..+-.+. +.+..+....++|.+
T Consensus       138 ~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~---~-~~~~~~~---g~~-~~~~~~~~~~~~~~~~~~~~~~~d~v  209 (320)
T cd05286         138 DTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEE---K-AELARAA---GAD-HVINYRDEDFVERVREITGGRGVDVV  209 (320)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHH---H-HHHHHHC---CCC-EEEeCCchhHHHHHHHHcCCCCeeEE
Confidence            78999999999999999999999999988874322   2 2222222   111 1222221111 223333333469999


Q ss_pred             EEccc
Q 024488          150 MHFAA  154 (267)
Q Consensus       150 i~~Ag  154 (267)
                      +++.+
T Consensus       210 l~~~~  214 (320)
T cd05286         210 YDGVG  214 (320)
T ss_pred             EECCC
Confidence            99876

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.33  E-value=0.12  Score=47.54  Aligned_cols=75  Identities=20%  Similarity=0.186  Sum_probs=48.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|+++|+|+ |++|.++++.|+++|++|++.+.....  ...+.+++.   ...+.++..+.. ..    .+.  +.|.|
T Consensus         5 ~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~--~~~~~l~~~---~~gi~~~~g~~~-~~----~~~--~~d~v   71 (445)
T PRK04308          5 NKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKP--ERVAQIGKM---FDGLVFYTGRLK-DA----LDN--GFDIL   71 (445)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCc--hhHHHHhhc---cCCcEEEeCCCC-HH----HHh--CCCEE
Confidence            389999996 599999999999999999998853321  111112221   123454444322 11    222  67999


Q ss_pred             EEccccCC
Q 024488          150 MHFAAVAY  157 (267)
Q Consensus       150 i~~Ag~~~  157 (267)
                      |...|+..
T Consensus        72 v~spgi~~   79 (445)
T PRK04308         72 ALSPGISE   79 (445)
T ss_pred             EECCCCCC
Confidence            99999863

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=95.30  E-value=0.086  Score=46.37  Aligned_cols=73  Identities=21%  Similarity=0.307  Sum_probs=47.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      .+++|+|++|.+|..+++.+...|++|+++.+.  .   ..+.+++.   +.. .  ..|..+.+..+.+....++|+++
T Consensus       164 ~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~--~---~~~~~~~~---g~~-~--~~~~~~~~~~~~l~~~~~vd~vi  232 (350)
T cd08248         164 KRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST--D---AIPLVKSL---GAD-D--VIDYNNEDFEEELTERGKFDVIL  232 (350)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc--c---hHHHHHHh---CCc-e--EEECCChhHHHHHHhcCCCCEEE
Confidence            899999999999999999999999999887642  1   12222332   111 1  12333333334444335799999


Q ss_pred             Eccc
Q 024488          151 HFAA  154 (267)
Q Consensus       151 ~~Ag  154 (267)
                      ++.|
T Consensus       233 ~~~g  236 (350)
T cd08248         233 DTVG  236 (350)
T ss_pred             ECCC
Confidence            9876

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=95.21  E-value=0.28  Score=44.38  Aligned_cols=75  Identities=19%  Similarity=0.253  Sum_probs=44.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCC---C-HHHHHHHhhcCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG---D-AKAVNKFFSENAF  146 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---d-~~~v~~~~~~~~~  146 (267)
                      .+|+|. |+|.||..++..+...|++++++..  .+ .+..+..+++   +  +..  .|..   + .+.+.++....++
T Consensus       187 ~~VlV~-G~G~iG~~aiqlAk~~Ga~~vi~~d--~~-~~r~~~a~~~---G--a~~--v~~~~~~~~~~~v~~~~~~~g~  255 (393)
T TIGR02819       187 STVYIA-GAGPVGLAAAASAQLLGAAVVIVGD--LN-PARLAQARSF---G--CET--VDLSKDATLPEQIEQILGEPEV  255 (393)
T ss_pred             CEEEEE-CCCHHHHHHHHHHHHcCCceEEEeC--CC-HHHHHHHHHc---C--CeE--EecCCcccHHHHHHHHcCCCCC
Confidence            789994 5799999999888889998665431  11 2222333333   2  221  2222   1 2334444433469


Q ss_pred             CEEEEccccC
Q 024488          147 DAVMHFAAVA  156 (267)
Q Consensus       147 D~li~~Ag~~  156 (267)
                      |++|.++|..
T Consensus       256 Dvvid~~G~~  265 (393)
T TIGR02819       256 DCAVDCVGFE  265 (393)
T ss_pred             cEEEECCCCc
Confidence            9999999854

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.18  E-value=0.077  Score=47.16  Aligned_cols=74  Identities=18%  Similarity=0.165  Sum_probs=45.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH---HHHHHHhhcCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENA  145 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~  145 (267)
                      +.+|+|.| +|++|...+..+...|++ |++++++..+    .+.++++   +.. .+  .|..+.   +.+.++....+
T Consensus       177 g~~VlV~G-~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~----~~~~~~~---Ga~-~~--i~~~~~~~~~~i~~~~~~~g  245 (358)
T TIGR03451       177 GDSVAVIG-CGGVGDAAIAGAALAGASKIIAVDIDDRK----LEWAREF---GAT-HT--VNSSGTDPVEAIRALTGGFG  245 (358)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHH----HHHHHHc---CCc-eE--EcCCCcCHHHHHHHHhCCCC
Confidence            38999998 599999999888888985 8887753322    2222333   111 11  233332   23333333346


Q ss_pred             CCEEEEccc
Q 024488          146 FDAVMHFAA  154 (267)
Q Consensus       146 ~D~li~~Ag  154 (267)
                      +|++|.+.|
T Consensus       246 ~d~vid~~g  254 (358)
T TIGR03451       246 ADVVIDAVG  254 (358)
T ss_pred             CCEEEECCC
Confidence            999999887

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PRK12767 carbamoyl phosphate synthase-like protein; Provisional

Probab=95.16  E-value=0.08  Score=46.36  Aligned_cols=70  Identities=17%  Similarity=0.184  Sum_probs=44.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEcc-CCC---HHHHHHHhhc
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD-LGD---AKAVNKFFSE  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-l~d---~~~v~~~~~~  143 (267)
                      |++|||||+++.+  .+++.|.+.|  ++|++++.++...  .....       ..  ++..+ ..+   .+.+.+++++
T Consensus         1 ~~~vLv~g~~~~~--~~~~~l~~~~~g~~vi~~d~~~~~~--~~~~~-------d~--~~~~p~~~~~~~~~~l~~~~~~   67 (326)
T PRK12767          1 MMNILVTSAGRRV--QLVKALKKSLLKGRVIGADISELAP--ALYFA-------DK--FYVVPKVTDPNYIDRLLDICKK   67 (326)
T ss_pred             CceEEEecCCccH--HHHHHHHHhccCCEEEEECCCCcch--hhHhc-------cC--cEecCCCCChhHHHHHHHHHHH
Confidence            6899999998777  8899999984  9999998543221  11110       11  12222 233   3556666666


Q ss_pred             CCCCEEEEc
Q 024488          144 NAFDAVMHF  152 (267)
Q Consensus       144 ~~~D~li~~  152 (267)
                      .++|+++-+
T Consensus        68 ~~id~ii~~   76 (326)
T PRK12767         68 EKIDLLIPL   76 (326)
T ss_pred             hCCCEEEEC
Confidence            789998865

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=95.15  E-value=0.12  Score=45.37  Aligned_cols=33  Identities=12%  Similarity=0.014  Sum_probs=30.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r  102 (267)
                      +.+|+|.|++|.+|..+++.+...|++|+++.+
T Consensus       147 g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~  179 (341)
T cd08290         147 GDWVIQNGANSAVGQAVIQLAKLLGIKTINVVR  179 (341)
T ss_pred             CCEEEEccchhHHHHHHHHHHHHcCCeEEEEEc
Confidence            389999999999999999999999999988875

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=95.14  E-value=0.51  Score=41.94  Aligned_cols=25  Identities=20%  Similarity=0.331  Sum_probs=23.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY   95 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~   95 (267)
                      .+|.|.||||.+|.++++.|.+++|
T Consensus         8 ~kVaVvGAtG~vG~eLlrlL~~~~h   32 (344)
T PLN02383          8 PSVAIVGVTGAVGQEFLSVLTDRDF   32 (344)
T ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC
Confidence            6899999999999999999999887

>PRK07411 hypothetical protein; Validated

Probab=95.14  E-value=0.36  Score=43.66  Aligned_cols=79  Identities=20%  Similarity=0.228  Sum_probs=49.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchh-------------------hhhhhcCCCCCceEEEEcc
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAV-------------------KVLQELFPEPGRLQFIYAD  130 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~D  130 (267)
                      .+|+|.| .||+|.++++.|+..|. +++++|...-...++.                   +.++++- ..-+++.+...
T Consensus        39 ~~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~n-p~v~v~~~~~~  116 (390)
T PRK07411         39 ASVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEIN-PYCQVDLYETR  116 (390)
T ss_pred             CcEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHC-CCCeEEEEecc
Confidence            7899998 78999999999999996 7888875322222211                   1112221 12245555555


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEccc
Q 024488          131 LGDAKAVNKFFSENAFDAVMHFAA  154 (267)
Q Consensus       131 l~d~~~v~~~~~~~~~D~li~~Ag  154 (267)
                      ++. +...+++.  ..|+||.+..
T Consensus       117 ~~~-~~~~~~~~--~~D~Vvd~~d  137 (390)
T PRK07411        117 LSS-ENALDILA--PYDVVVDGTD  137 (390)
T ss_pred             cCH-HhHHHHHh--CCCEEEECCC
Confidence            554 34556666  6899988753

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.13  E-value=0.02  Score=45.88  Aligned_cols=40  Identities=30%  Similarity=0.365  Sum_probs=30.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhh
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVK  112 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~  112 (267)
                      +|.|.|+ |.+|+.+|..++..|++|++.+++....+...+
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~   40 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARK   40 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhh
Confidence            5788896 999999999999999999999975544444333

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.09  E-value=0.38  Score=44.67  Aligned_cols=74  Identities=23%  Similarity=0.069  Sum_probs=46.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +++|+|.|+ |++|.++|+.|.++|++|+++++...  +......+.+...  .+.++..+-..      ..  ..+|.|
T Consensus        16 ~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~--~~~~~~~~~l~~~--gv~~~~~~~~~------~~--~~~D~V   82 (480)
T PRK01438         16 GLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDD--ERHRALAAILEAL--GATVRLGPGPT------LP--EDTDLV   82 (480)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCch--hhhHHHHHHHHHc--CCEEEECCCcc------cc--CCCCEE
Confidence            378999994 88999999999999999999985332  1111111222221  34444433211      11  267999


Q ss_pred             EEccccC
Q 024488          150 MHFAAVA  156 (267)
Q Consensus       150 i~~Ag~~  156 (267)
                      |...|+.
T Consensus        83 v~s~Gi~   89 (480)
T PRK01438         83 VTSPGWR   89 (480)
T ss_pred             EECCCcC
Confidence            9988874

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.08  E-value=0.16  Score=44.59  Aligned_cols=75  Identities=21%  Similarity=0.195  Sum_probs=46.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +.+++|.|++|.+|..++..+...|++|+.+....     ..+.++++   +.. .++..+-.+... .......++|++
T Consensus       178 g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-----~~~~~~~~---g~~-~~~~~~~~~~~~-~~~~~~~~~d~v  247 (350)
T cd08274         178 GETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-----KEEAVRAL---GAD-TVILRDAPLLAD-AKALGGEPVDVV  247 (350)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-----hhHHHHhc---CCe-EEEeCCCccHHH-HHhhCCCCCcEE
Confidence            38999999999999999999999999998887421     12222332   211 222221112222 222233579999


Q ss_pred             EEccc
Q 024488          150 MHFAA  154 (267)
Q Consensus       150 i~~Ag  154 (267)
                      |++.|
T Consensus       248 i~~~g  252 (350)
T cd08274         248 ADVVG  252 (350)
T ss_pred             EecCC
Confidence            99876

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.07  E-value=0.077  Score=45.99  Aligned_cols=74  Identities=11%  Similarity=0.057  Sum_probs=47.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHH---HHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---AVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~v~~~~~~~~~D  147 (267)
                      .+++|.|++|.+|..+++.+.+.|++|+++.++...    .+.++++   +.. .+  .|..+.+   .+.+.....++|
T Consensus       140 ~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~----~~~~~~~---g~~-~~--~~~~~~~~~~~~~~~~~~~~~d  209 (323)
T cd05282         140 DWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQ----VEELKAL---GAD-EV--IDSSPEDLAQRVKEATGGAGAR  209 (323)
T ss_pred             CEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHH----HHHHHhc---CCC-EE--ecccchhHHHHHHHHhcCCCce
Confidence            799999999999999999999999999888754322    2222222   111 11  1222222   233333334799


Q ss_pred             EEEEccc
Q 024488          148 AVMHFAA  154 (267)
Q Consensus       148 ~li~~Ag  154 (267)
                      +++++.|
T Consensus       210 ~vl~~~g  216 (323)
T cd05282         210 LALDAVG  216 (323)
T ss_pred             EEEECCC
Confidence            9999876

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.04  E-value=0.13  Score=45.88  Aligned_cols=72  Identities=18%  Similarity=0.218  Sum_probs=45.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      ++|+|.| +|+||..++..+...|++|++++.+...   ..+..+++   +.. .+  .|..+.+.+.+...  ++|++|
T Consensus       185 ~~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~---~~~~~~~~---Ga~-~v--i~~~~~~~~~~~~~--~~D~vi  252 (360)
T PLN02586        185 KHLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNK---EDEAINRL---GAD-SF--LVSTDPEKMKAAIG--TMDYII  252 (360)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcch---hhhHHHhC---CCc-EE--EcCCCHHHHHhhcC--CCCEEE
Confidence            7899976 5999999999888899999887743322   12222222   111 11  23333444555432  689999


Q ss_pred             Eccc
Q 024488          151 HFAA  154 (267)
Q Consensus       151 ~~Ag  154 (267)
                      .+.|
T Consensus       253 d~~g  256 (360)
T PLN02586        253 DTVS  256 (360)
T ss_pred             ECCC
Confidence            9887

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=95.04  E-value=0.071  Score=45.66  Aligned_cols=73  Identities=19%  Similarity=0.235  Sum_probs=43.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC-HHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~D~  148 (267)
                      ++|+|.|+ |+||...++.+...|++ |++++++..    ..+..+++   +.. ..  .|..+ .+.+.++....++|+
T Consensus       122 ~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~----r~~~a~~~---Ga~-~~--i~~~~~~~~~~~~~~~~g~d~  190 (280)
T TIGR03366       122 RRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPD----RRELALSF---GAT-AL--AEPEVLAERQGGLQNGRGVDV  190 (280)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH----HHHHHHHc---CCc-Ee--cCchhhHHHHHHHhCCCCCCE
Confidence            78999986 89999998888888987 777664321    12223333   111 11  12222 223333333346999


Q ss_pred             EEEccc
Q 024488          149 VMHFAA  154 (267)
Q Consensus       149 li~~Ag  154 (267)
                      +|.+.|
T Consensus       191 vid~~G  196 (280)
T TIGR03366       191 ALEFSG  196 (280)
T ss_pred             EEECCC
Confidence            999887

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.04  E-value=0.076  Score=43.93  Aligned_cols=31  Identities=29%  Similarity=0.314  Sum_probs=27.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEe
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVD  101 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~  101 (267)
                      +++|+|-| .|.+|+++++.|.+.|++|+.+.
T Consensus        23 g~~vaIqG-fGnVG~~~a~~L~~~G~~vV~vs   53 (217)
T cd05211          23 GLTVAVQG-LGNVGWGLAKKLAEEGGKVLAVS   53 (217)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEE
Confidence            38999998 89999999999999999777765

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.03  E-value=0.099  Score=45.56  Aligned_cols=33  Identities=27%  Similarity=0.127  Sum_probs=29.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      .+++|.|++|.+|..+++.+.+.|++|+.+.++
T Consensus       141 ~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~  173 (329)
T cd08250         141 ETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSS  173 (329)
T ss_pred             CEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCc
Confidence            789999999999999999888899999888753

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.01  E-value=0.089  Score=45.78  Aligned_cols=74  Identities=23%  Similarity=0.256  Sum_probs=46.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH----HHHHHHhhcCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA----KAVNKFFSENAF  146 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~----~~v~~~~~~~~~  146 (267)
                      .+++|+|++|.+|..+++.+.+.|++++++.++..   . .+.+.++   +.. .++  |..+.    +.+.+.....++
T Consensus       142 ~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~---~-~~~~~~~---g~~-~~~--~~~~~~~~~~~~~~~~~~~~~  211 (334)
T PTZ00354        142 QSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEE---K-VDFCKKL---AAI-ILI--RYPDEEGFAPKVKKLTGEKGV  211 (334)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH---H-HHHHHHc---CCc-EEE--ecCChhHHHHHHHHHhCCCCc
Confidence            78999999999999999999999999887764322   1 2222222   111 112  22222    233333333469


Q ss_pred             CEEEEccc
Q 024488          147 DAVMHFAA  154 (267)
Q Consensus       147 D~li~~Ag  154 (267)
                      |.++++.|
T Consensus       212 d~~i~~~~  219 (334)
T PTZ00354        212 NLVLDCVG  219 (334)
T ss_pred             eEEEECCc
Confidence            99999875

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=95.01  E-value=0.094  Score=45.46  Aligned_cols=34  Identities=38%  Similarity=0.422  Sum_probs=30.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      .+|+|.|++|.+|..++..+...|++|++++++.
T Consensus       148 ~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~  181 (325)
T cd05280         148 GPVLVTGATGGVGSIAVAILAKLGYTVVALTGKE  181 (325)
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCH
Confidence            5899999999999999988888999998887543

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>PLN02928 oxidoreductase family protein

Probab=94.99  E-value=0.075  Score=47.25  Aligned_cols=34  Identities=24%  Similarity=0.165  Sum_probs=30.9

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      .+|++.|.| .|.||+++|+.|...|++|++.+|+
T Consensus       158 ~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~  191 (347)
T PLN02928        158 FGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRS  191 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCC
Confidence            349999999 6999999999999999999999875

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=94.97  E-value=0.24  Score=45.16  Aligned_cols=34  Identities=29%  Similarity=0.324  Sum_probs=30.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      +++|.|.| .|.+|..+|..|++.|++|+++++++
T Consensus         3 ~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~   36 (415)
T PRK11064          3 FETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQ   36 (415)
T ss_pred             ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCH
Confidence            46788887 79999999999999999999999644

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.94  E-value=0.0096  Score=51.45  Aligned_cols=36  Identities=22%  Similarity=0.361  Sum_probs=31.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN  107 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~  107 (267)
                      ++|.|.|+ |-+|..+|..|++.|++|+++++++...
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~   37 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQL   37 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHH
Confidence            67899995 9999999999999999999999755433

>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein

Probab=94.94  E-value=0.27  Score=46.47  Aligned_cols=80  Identities=15%  Similarity=0.226  Sum_probs=55.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEE--ecCCCCCcchhhhhhhcC-CCCCceEEEEccCCCHHHHHHHhhcCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIV--DNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAF  146 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~--~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (267)
                      .+|+|.| +|++|.+++..|+..|. ++.++  |....+..+..+. .+.. ..+.++.+-..|.++.+++...++  +.
T Consensus       130 akVlVlG-~Gg~~s~lv~sL~~sG~~~I~~vd~D~v~SNlnRIgEl-~e~A~~~n~~v~v~~i~~~~~~dl~ev~~--~~  205 (637)
T TIGR03693       130 AKILAAG-SGDFLTKLVRSLIDSGFPRFHAIVTDAEEHALDRIHEL-AEIAEETDDALLVQEIDFAEDQHLHEAFE--PA  205 (637)
T ss_pred             ccEEEEe-cCchHHHHHHHHHhcCCCcEEEEeccccchhhhHHHHH-HHHHHHhCCCCceEeccCCcchhHHHhhc--CC
Confidence            6899999 89999999999999995 55555  4433333322222 2221 124566666667788889999998  78


Q ss_pred             CEEEEccc
Q 024488          147 DAVMHFAA  154 (267)
Q Consensus       147 D~li~~Ag  154 (267)
                      |+||+.+-
T Consensus       206 DiVi~vsD  213 (637)
T TIGR03693       206 DWVLYVSD  213 (637)
T ss_pred             cEEEEECC
Confidence            99999874

Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=94.90  E-value=0.35  Score=42.75  Aligned_cols=33  Identities=21%  Similarity=0.138  Sum_probs=29.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      +.+|+|.|+ |.+|...+..+...|++|++++++
T Consensus       167 g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~  199 (349)
T TIGR03201       167 GDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDID  199 (349)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCC
Confidence            389999998 999999999998999999888753

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=94.84  E-value=0.089  Score=46.48  Aligned_cols=73  Identities=22%  Similarity=0.277  Sum_probs=45.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~  146 (267)
                      .+|+|+| +|++|..+++.+.+.|+ +|++++++..   + .+.+.++   +...   ..|..+.   +.+.++....++
T Consensus       174 ~~vlI~g-~g~vG~~a~q~a~~~G~~~v~~~~~~~~---~-~~~~~~~---ga~~---~i~~~~~~~~~~l~~~~~~~~~  242 (351)
T cd08233         174 DTALVLG-AGPIGLLTILALKAAGASKIIVSEPSEA---R-RELAEEL---GATI---VLDPTEVDVVAEVRKLTGGGGV  242 (351)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHH---H-HHHHHHh---CCCE---EECCCccCHHHHHHHHhCCCCC
Confidence            7999998 48999999999999999 7887764322   2 2222232   1111   1233332   234444333459


Q ss_pred             CEEEEccc
Q 024488          147 DAVMHFAA  154 (267)
Q Consensus       147 D~li~~Ag  154 (267)
                      |++++++|
T Consensus       243 d~vid~~g  250 (351)
T cd08233         243 DVSFDCAG  250 (351)
T ss_pred             CEEEECCC
Confidence            99999987

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=94.83  E-value=0.16  Score=41.50  Aligned_cols=32  Identities=25%  Similarity=0.517  Sum_probs=29.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r  102 (267)
                      +|+|+|.|| |-+|...++.|++.|++|+++.+
T Consensus        10 ~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~   41 (202)
T PRK06718         10 NKRVVIVGG-GKVAGRRAITLLKYGAHIVVISP   41 (202)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcC
Confidence            399999996 99999999999999999999874

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=94.82  E-value=0.15  Score=45.63  Aligned_cols=80  Identities=14%  Similarity=0.211  Sum_probs=51.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCC---------------
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG---------------  132 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---------------  132 (267)
                      ||+|.|.|+||.||......+.+.  .++|+.+.- ..+.+.+.+..++..   ++..++ .|-.               
T Consensus         1 mk~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa-~~n~~~l~~q~~~f~---p~~v~i-~~~~~~~~l~~~l~~~~~~   75 (385)
T PRK05447          1 MKRITILGSTGSIGTQTLDVIRRNPDRFRVVALSA-GKNVELLAEQAREFR---PKYVVV-ADEEAAKELKEALAAAGIE   75 (385)
T ss_pred             CceEEEEcCChHHHHHHHHHHHhCccccEEEEEEc-CCCHHHHHHHHHHhC---CCEEEE-cCHHHHHHHHHhhccCCce
Confidence            589999999999999999888664  578888763 234445555555442   222222 1111               


Q ss_pred             ---CHHHHHHHhhcCCCCEEEEccc
Q 024488          133 ---DAKAVNKFFSENAFDAVMHFAA  154 (267)
Q Consensus       133 ---d~~~v~~~~~~~~~D~li~~Ag  154 (267)
                         -.+.+.++++...+|+|++..+
T Consensus        76 v~~G~~~~~~l~~~~~vD~Vv~Ai~  100 (385)
T PRK05447         76 VLAGEEGLCELAALPEADVVVAAIV  100 (385)
T ss_pred             EEEChhHHHHHhcCCCCCEEEEeCc
Confidence               2345555555567899998754

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=94.81  E-value=0.16  Score=44.89  Aligned_cols=66  Identities=21%  Similarity=0.302  Sum_probs=48.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      |++|.|.| +|.+|+-++.+-...|++|++++-.+....  .+.         .-..+..+..|.+.++++++  ++|+|
T Consensus         1 ~~tvgIlG-GGQLgrMm~~aa~~lG~~v~vLdp~~~~PA--~~v---------a~~~i~~~~dD~~al~ela~--~~DVi   66 (375)
T COG0026           1 MKTVGILG-GGQLGRMMALAAARLGIKVIVLDPDADAPA--AQV---------ADRVIVAAYDDPEALRELAA--KCDVI   66 (375)
T ss_pred             CCeEEEEc-CcHHHHHHHHHHHhcCCEEEEecCCCCCch--hhc---------ccceeecCCCCHHHHHHHHh--hCCEE
Confidence            47899999 699999999999999999999984333221  111         11234566668888888888  66766

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=94.81  E-value=0.041  Score=43.19  Aligned_cols=33  Identities=30%  Similarity=0.419  Sum_probs=27.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r  102 (267)
                      +|+|+|.|.|.-+|+.++..|.++|+.|+++..
T Consensus        36 Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~   68 (160)
T PF02882_consen   36 GKKVVVVGRSNIVGKPLAMLLLNKGATVTICHS   68 (160)
T ss_dssp             T-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-T
T ss_pred             CCEEEEECCcCCCChHHHHHHHhCCCeEEeccC
Confidence            499999999999999999999999999998763

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=94.81  E-value=0.1  Score=45.04  Aligned_cols=74  Identities=20%  Similarity=0.252  Sum_probs=47.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      .+|+|.|++|.+|..+++.+...|++|+.+.++..   + .+.+.++   +.. .++..+-...+.+.++  ..++|.++
T Consensus       144 ~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~---~-~~~~~~~---g~~-~~~~~~~~~~~~i~~~--~~~~d~vl  213 (320)
T cd08243         144 DTLLIRGGTSSVGLAALKLAKALGATVTATTRSPE---R-AALLKEL---GAD-EVVIDDGAIAEQLRAA--PGGFDKVL  213 (320)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHH---H-HHHHHhc---CCc-EEEecCccHHHHHHHh--CCCceEEE
Confidence            79999999999999999999999999988874332   1 2222222   111 1121111112334444  34799999


Q ss_pred             Eccc
Q 024488          151 HFAA  154 (267)
Q Consensus       151 ~~Ag  154 (267)
                      ++.|
T Consensus       214 ~~~~  217 (320)
T cd08243         214 ELVG  217 (320)
T ss_pred             ECCC
Confidence            9876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK14852 hypothetical protein; Provisional

Probab=94.76  E-value=0.61  Score=46.70  Aligned_cols=78  Identities=12%  Similarity=0.168  Sum_probs=50.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchh-------------------hhhhhcCCCCCceEEEEcc
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAV-------------------KVLQELFPEPGRLQFIYAD  130 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~D  130 (267)
                      .+|+|.| .||+|..+++.|+..|. +++++|...-...++.                   +.++++ ...-+++.+...
T Consensus       333 srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~I-NP~v~I~~~~~~  410 (989)
T PRK14852        333 SRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSV-NPFLDIRSFPEG  410 (989)
T ss_pred             CcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHH-CCCCeEEEEecC
Confidence            7899998 79999999999999996 7777764321111111                   112222 112245556566


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEcc
Q 024488          131 LGDAKAVNKFFSENAFDAVMHFA  153 (267)
Q Consensus       131 l~d~~~v~~~~~~~~~D~li~~A  153 (267)
                      + +.+.+.++++  ++|+||.+.
T Consensus       411 I-~~en~~~fl~--~~DiVVDa~  430 (989)
T PRK14852        411 V-AAETIDAFLK--DVDLLVDGI  430 (989)
T ss_pred             C-CHHHHHHHhh--CCCEEEECC
Confidence            6 4566778887  789999754

>PLN02740 Alcohol dehydrogenase-like

Probab=94.75  E-value=0.13  Score=46.22  Aligned_cols=74  Identities=18%  Similarity=0.149  Sum_probs=46.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH-----HHHHHHhhc
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-----KAVNKFFSE  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-----~~v~~~~~~  143 (267)
                      +.+|+|.|+ |+||...+..+...|+ +|++++++..+    .+.++++   +.. .++  |..+.     +.+.++.. 
T Consensus       199 g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r----~~~a~~~---Ga~-~~i--~~~~~~~~~~~~v~~~~~-  266 (381)
T PLN02740        199 GSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEK----FEKGKEM---GIT-DFI--NPKDSDKPVHERIREMTG-  266 (381)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHH----HHHHHHc---CCc-EEE--ecccccchHHHHHHHHhC-
Confidence            389999985 9999999998888998 68888753322    2222333   211 122  33221     23333333 


Q ss_pred             CCCCEEEEcccc
Q 024488          144 NAFDAVMHFAAV  155 (267)
Q Consensus       144 ~~~D~li~~Ag~  155 (267)
                      +++|++|.++|.
T Consensus       267 ~g~dvvid~~G~  278 (381)
T PLN02740        267 GGVDYSFECAGN  278 (381)
T ss_pred             CCCCEEEECCCC
Confidence            369999999883

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.74  E-value=0.1  Score=44.94  Aligned_cols=32  Identities=19%  Similarity=0.330  Sum_probs=30.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEe
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVD  101 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~  101 (267)
                      +|+|+|.|.|.-+|+-++..|.++|++|+++.
T Consensus       164 Gk~vvViGrs~iVGkPla~lL~~~~atVtv~h  195 (287)
T PRK14176        164 GKNAVIVGHSNVVGKPMAAMLLNRNATVSVCH  195 (287)
T ss_pred             CCEEEEECCCcccHHHHHHHHHHCCCEEEEEe
Confidence            39999999999999999999999999999876

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=94.73  E-value=0.13  Score=35.10  Aligned_cols=32  Identities=31%  Similarity=0.483  Sum_probs=28.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      +|+|.| +|.+|.++|..|.+.|.+|+++.+++
T Consensus         1 ~vvViG-gG~ig~E~A~~l~~~g~~vtli~~~~   32 (80)
T PF00070_consen    1 RVVVIG-GGFIGIELAEALAELGKEVTLIERSD   32 (80)
T ss_dssp             EEEEES-SSHHHHHHHHHHHHTTSEEEEEESSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHhCcEEEEEeccc
Confidence            467777 79999999999999999999999754

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.72  E-value=0.1  Score=44.89  Aligned_cols=33  Identities=24%  Similarity=0.385  Sum_probs=30.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r  102 (267)
                      +|+|+|.|.|.-+|+-++..|.++|++|+++.+
T Consensus       159 Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs  191 (285)
T PRK10792        159 GLNAVVVGASNIVGRPMSLELLLAGCTVTVCHR  191 (285)
T ss_pred             CCEEEEECCCcccHHHHHHHHHHCCCeEEEEEC
Confidence            399999999999999999999999999999863

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=94.72  E-value=0.11  Score=47.33  Aligned_cols=34  Identities=29%  Similarity=0.286  Sum_probs=30.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      +++|+|.| .|.||+.++..|...|++|+++++.+
T Consensus       212 Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp  245 (425)
T PRK05476        212 GKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDP  245 (425)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCc
Confidence            49999999 58999999999999999999998644

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=94.71  E-value=0.11  Score=45.19  Aligned_cols=76  Identities=12%  Similarity=0.041  Sum_probs=47.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC-HHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~D~l  149 (267)
                      .+++|.||+|.+|..+++.+...|++|+.+++...   + .+.++++   +. -.++..+-.+ .+.+..+....++|++
T Consensus       142 ~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~---~-~~~~~~~---g~-~~~~~~~~~~~~~~~~~~~~~~~~d~v  213 (327)
T PRK10754        142 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQ---K-AQRAKKA---GA-WQVINYREENIVERVKEITGGKKVRVV  213 (327)
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHH---H-HHHHHHC---CC-CEEEcCCCCcHHHHHHHHcCCCCeEEE
Confidence            79999999999999999888899999988874322   1 1222222   11 1222222112 2334444443578999


Q ss_pred             EEccc
Q 024488          150 MHFAA  154 (267)
Q Consensus       150 i~~Ag  154 (267)
                      +++.|
T Consensus       214 l~~~~  218 (327)
T PRK10754        214 YDSVG  218 (327)
T ss_pred             EECCc
Confidence            98875

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=94.71  E-value=0.47  Score=40.87  Aligned_cols=105  Identities=13%  Similarity=0.103  Sum_probs=62.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---CCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~~~  146 (267)
                      +++++|.||+|-.|+-.-+-..-.|+.|+...-   +.++ ...++........+     |-.++.++.+++++   .++
T Consensus       154 geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaG---S~EK-v~ll~~~~G~d~af-----NYK~e~~~~~aL~r~~P~GI  224 (343)
T KOG1196|consen  154 GETVFVSAASGAVGQLVGQFAKLMGCYVVGSAG---SKEK-VDLLKTKFGFDDAF-----NYKEESDLSAALKRCFPEGI  224 (343)
T ss_pred             CCEEEEeeccchhHHHHHHHHHhcCCEEEEecC---Chhh-hhhhHhccCCccce-----eccCccCHHHHHHHhCCCcc
Confidence            399999999999998655544556998888662   2222 22232221111112     22233344555544   479


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCC
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP  203 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~  203 (267)
                      |+-+-|.|-.                  ....++..|..+  +||+.-+-.+.|...
T Consensus       225 DiYfeNVGG~------------------~lDavl~nM~~~--gri~~CG~ISqYN~~  261 (343)
T KOG1196|consen  225 DIYFENVGGK------------------MLDAVLLNMNLH--GRIAVCGMISQYNLE  261 (343)
T ss_pred             eEEEeccCcH------------------HHHHHHHhhhhc--cceEeeeeehhcccc
Confidence            9999998832                  122344455554  588888888888543

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=94.68  E-value=0.14  Score=45.01  Aligned_cols=76  Identities=21%  Similarity=0.254  Sum_probs=47.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEc-cCCCHHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA-DLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      .+++|.|+++++|..+++.+.+.|++|+.+.++..   + .+.++++   +.. .++.. +....+.+.+.....++|++
T Consensus       167 ~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~---~-~~~~~~~---g~~-~v~~~~~~~~~~~~~~~~~~~~vd~v  238 (341)
T cd08297         167 DWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDE---K-LELAKEL---GAD-AFVDFKKSDDVEAVKELTGGGGAHAV  238 (341)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHH---H-HHHHHHc---CCc-EEEcCCCccHHHHHHHHhcCCCCCEE
Confidence            79999999999999999999999999999875332   1 2222332   111 11111 11122334444433579999


Q ss_pred             EEccc
Q 024488          150 MHFAA  154 (267)
Q Consensus       150 i~~Ag  154 (267)
                      +++.+
T Consensus       239 l~~~~  243 (341)
T cd08297         239 VVTAV  243 (341)
T ss_pred             EEcCC
Confidence            98654

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	267
1z45_A	699	Crystal Structure Of The Gal10 Fusion Protein Galac		1e-32
1hzj_A	348	Human Udp-Galactose 4-Epimerase: Accommodation Of U		5e-28
1kvs_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		6e-28
2udp_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		1e-27
1i3k_A	348	Molecular Basis For Severe Epimerase-Deficiency Gal		1e-27
1ek5_A	348	Structure Of Human Udp-Galactose 4-Epimerase In Com		1e-27
1lrk_A	338	Crystal Structure Of Escherichia Coli Udp-Galactose		1e-27
1lrj_A	338	Crystal Structure Of E. Coli Udp-Galactose 4-Epimer		1e-27
1kvr_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		2e-27
1kvt_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		2e-27
1kvq_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		2e-27
1kvu_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		3e-27
1a9y_A	338	Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX		5e-27
1a9z_A	338	Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX		7e-27
2c20_A	330	Crystal Structure Of Udp-Glucose 4-Epimerase Length		1e-26
3enk_A	341	1.9a Crystal Structure Of Udp-Glucose 4-Epimerase F		5e-26
1gy8_A	397	Trypanosoma Brucei Udp-Galactose 4' Epimerase Lengt		2e-21
3ehe_A	313	Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-		3e-18
3icp_A	312	Crystal Structure Of Udp-Galactose 4-Epimerase Leng		2e-17
3aw9_A	308	Structure Of Udp-Galactose 4-Epimerase Mutant Lengt		2e-15
2p5u_A	311	Crystal Structure Of Thermus Thermophilus Hb8 Udp-G		1e-14
4egb_A	346	3.0 Angstrom Resolution Crystal Structure Of Dtdp-G		2e-14
1r6d_A	337	Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc		1e-13
1r66_A	337	Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr		1e-13
2pzk_A	330	Crystal Structure Of The Bordetella Bronchiseptica		2e-12
4ef7_B	337	Udp-Xylose Synthase Length = 337		5e-12
3vps_A	321	Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5		6e-12
2hun_A	336	Crystal Structure Of Hypothetical Protein Ph0414 Fr		1e-11
2b69_A	343	Crystal Structure Of Human Udp-Glucoronic Acid Deca		2e-11
1orr_A	347	Crystal Structure Of Cdp-tyvelose 2-epimerase Compl		3e-11
1g1a_A	361	The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra		2e-10
2q1w_A	333	Crystal Structure Of The Bordetella Bronchiseptica		3e-10
3ruc_A	351	Specific Recognition Of N-Acetylated Substrates And		4e-10
3ru9_A	351	Specific Recognition Of N-Acetylated Substrates And		4e-10
3ru7_A	351	Specific Recognition Of N-Acetylated Substrates And		4e-10
3lu1_A	364	Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-		4e-10
1sb8_A	352	Crystal Structure Of Pseudomonas Aeruginosa Udp-N-A		5e-10
1bxk_A	355	Dtdp-Glucose 4,6-Dehydratase From E. Coli Length =		3e-09
2pk3_A	321	Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose		2e-08
1t2a_A	375	Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydr		3e-08
2z1m_A	345	Crystal Structure Of Gdp-D-Mannose Dehydratase From		5e-08
1kep_A	348	The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra		6e-08
4id9_A	347	Crystal Structure Of A Short-Chain DehydrogenaseRED		7e-08
1db3_A	372	E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372		1e-06
1rpn_A	335	Crystal Structure Of Gdp-D-Mannose 4,6-Dehydratase		7e-06
2hrz_A	342	The Crystal Structure Of The Nucleoside-diphosphate		7e-06
3a1n_A	317	Crystal Structure Of L-Threonine Dehydrogenase From		2e-05
3a9w_A	317	Crystal Structure Of L-Threonine Bound L-Threonine		5e-05
1i24_A	404	High Resolution Crystal Structure Of The Wild-Type		8e-05
1qrr_A	394	Crystal Structure Of Sqd1 Protein Complex With Nad		9e-05
2pzj_A	377	Crystal Structure Of The Bordetella Bronchiseptica		2e-04
1i2b_A	404	Crystal Structure Of Mutant T145a Sqd1 Protein Comp		3e-04
3ay3_A	267	Crystal Structure Of Glucuronic Acid Dehydrogeanse		4e-04
2c29_D	337	Structure Of Dihydroflavonol Reductase From Vitis V		6e-04

>pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699

Iteration: 1
 Score =  136 bits (343), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 77/195 (39%), Positives = 105/195 (53%), Gaps = 7/195 (3%)
Query: 65  QHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRL 124
           Q E     VLVTGGAGYIGSH  + L+++ Y   + DNLS     +V  L+ L      +
Sbjct: 6   QSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKH--HI 63
Query: 125 QFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMA 184
            F   DL D K + K F E   D+V+HFA +  VGEST  PL+YYHN    T+V+LE M 
Sbjct: 64  PFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQ 123
Query: 185 RHGVDTLIYSSTCATYGE----PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           ++ V   ++SS+   YG+    P  +PI EE P  P NPYG  K   E+I+ D   NSD 
Sbjct: 124 QYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLY-NSDK 182
Query: 241 AVMILRLVVFFTLVA 255
                 ++ +F  + 
Sbjct: 183 KSWKFAILRYFNPIG 197

>pdb|1HZJ|A Chain A, Human Udp-Galactose 4-Epimerase: Accommodation Of Udp-N- Acetylglucosamine Within The Active Site Length = 348

Iteration: 1
 Score =  121 bits (303), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 102/180 (56%), Gaps = 6/180 (3%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNIGAVKVLQELFPEPGR-LQFIY 128
           VLVTGGAGYIGSH  L LL+  Y   ++DN     RG     + L+ +    GR ++F  
Sbjct: 5   VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+ D  A+ + F + +F AV+HFA +  VGES   PL YY    + T+ +LE M  HGV
Sbjct: 65  MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
             L++SS+   YG P+ +P+ E  P     NPYGK+K   E++I D  + +    V++LR
Sbjct: 125 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNVVLLR 184

>pdb|1KVS|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score =  120 bits (302), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 100/176 (56%), Gaps = 4/176 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
           +SST   YG+  K+P  E  P   P +PYGK+K M E I+ D  K   D ++ +LR
Sbjct: 121 FSSTATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLR 176

>pdb|2UDP|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score =  120 bits (300), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/176 (36%), Positives = 100/176 (56%), Gaps = 4/176 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
           +SS+   YG+  K+P  E  P   P +PYGK+K M E I+ D  K   D ++ +LR
Sbjct: 121 FSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLR 176

>pdb|1I3K|A Chain A, Molecular Basis For Severe Epimerase-Deficiency Galactosemia: X-Ray Structure Of The Human V94m- Substituted Udp-Galactose 4-Epimerase Length = 348

Iteration: 1
 Score =  119 bits (299), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 102/180 (56%), Gaps = 6/180 (3%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNIGAVKVLQELFPEPGR-LQFIY 128
           VLVTGGAGYIGSH  L LL+  Y   ++DN     RG     + L+ +    GR ++F  
Sbjct: 5   VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+ D  A+ + F + +F AV+HFA +  +GES   PL YY    + T+ +LE M  HGV
Sbjct: 65  MDILDQGALQRLFKKYSFMAVIHFAGLKAMGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
             L++SS+   YG P+ +P+ E  P     NPYGK+K   E++I D  + +    V++LR
Sbjct: 125 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNVVLLR 184

>pdb|1EK5|A Chain A, Structure Of Human Udp-Galactose 4-Epimerase In Complex With Nad+ Length = 348

Iteration: 1
 Score =  119 bits (299), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 96/169 (56%), Gaps = 5/169 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNIGAVKVLQELFPEPGR-LQFIY 128
           VLVTGGAGYIGSH  L LL+  Y   ++DN     RG     + L+ +    GR ++F  
Sbjct: 5   VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+ D  A+ + F + +F AV+HFA +  VGES   PL YY    + T+ +LE M  HGV
Sbjct: 65  MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSK 236
             L++SS+   YG P+ +P+ E  P     NPYGK+K   E++I D  +
Sbjct: 125 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQ 173

>pdb|1LRK|A Chain A, Crystal Structure Of Escherichia Coli Udp-Galactose 4-Epimerase Mutant Y299c Complexed With Udp-N-Acetylglucosamine Length = 338

Iteration: 1
 Score =  119 bits (299), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/176 (36%), Positives = 100/176 (56%), Gaps = 4/176 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
           +SS+   YG+  K+P  E  P   P +PYGK+K M E I+ D  K   D ++ +LR
Sbjct: 121 FSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLR 176

>pdb|1LRJ|A Chain A, Crystal Structure Of E. Coli Udp-Galactose 4-Epimerase Complexed With Udp-N-Acetylglucosamine Length = 338

Iteration: 1
 Score =  119 bits (299), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/176 (36%), Positives = 100/176 (56%), Gaps = 4/176 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
           +SS+   YG+  K+P  E  P   P +PYGK+K M E I+ D  K   D ++ +LR
Sbjct: 121 FSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLR 176

>pdb|1KVR|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/176 (36%), Positives = 99/176 (56%), Gaps = 4/176 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
           +SS    YG+  K+P  E  P   P +PYGK+K M E I+ D  K   D ++ +LR
Sbjct: 121 FSSAATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLR 176

>pdb|1KVT|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score =  119 bits (297), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/176 (36%), Positives = 99/176 (56%), Gaps = 4/176 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
           +SS    YG+  K+P  E  P   P +PYGK+K M E I+ D  K   D ++ +LR
Sbjct: 121 FSSVATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLR 176

>pdb|1KVQ|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score =  119 bits (297), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/176 (36%), Positives = 99/176 (56%), Gaps = 4/176 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
           +SS    YG+  K+P  E  P   P +PYGK+K M E I+ D  K   D ++ +LR
Sbjct: 121 FSSAATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLR 176

>pdb|1KVU|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score =  118 bits (296), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 100/176 (56%), Gaps = 4/176 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
           +SS+   YG+  K+P  E  P   P +P+GK+K M E I+ D  K   D ++ +LR
Sbjct: 121 FSSSATVYGDQPKIPYVESFPTGTPQSPFGKSKLMVEQILTDLQKAQPDWSIALLR 176

>pdb|1A9Y|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Glucose Length = 338

Iteration: 1
 Score =  117 bits (294), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 99/176 (56%), Gaps = 4/176 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
           +SS    YG+  K+P  E  P   P +P+GK+K M E I+ D  K   D ++ +LR
Sbjct: 121 FSSAATVYGDQPKIPYVESFPTGTPQSPFGKSKLMVEQILTDLQKAQPDWSIALLR 176

>pdb|1A9Z|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Galactose Length = 338

Iteration: 1
 Score =  117 bits (293), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 99/176 (56%), Gaps = 4/176 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 193 YSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
           +SS    YG+  K+P  E  P   P +P+GK+K M E I+ D  K   D ++ +LR
Sbjct: 121 FSSAATVYGDNPKIPYVESFPTGTPQSPFGKSKLMVEQILTDLQKAQPDWSIALLR 176

>pdb|2C20|A Chain A, Crystal Structure Of Udp-Glucose 4-Epimerase Length = 330

Iteration: 1
 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 95/174 (54%), Gaps = 9/174 (5%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+ GGAGYIGSHA  +L+ +   V +VDNL  G+  A+             +F   DL 
Sbjct: 4   ILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITE---------GAKFYNGDLR 54
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D   +   F++   +AVMHFAA + VG S   PL+YY+N     L +LE M    VD  I
Sbjct: 55  DKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFI 114
Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           +SST ATYGE +   ITEET   P N YG+ K   E ++  +S+ S++   I R
Sbjct: 115 FSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFR 168

>pdb|3ENK|A Chain A, 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase From Burkholderia Pseudomallei Length = 341

Iteration: 1
 Score =  114 bits (286), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 97/176 (55%), Gaps = 5/176 (2%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRL-QFIYADL 131
           +LVTGGAGYIGSH A+ LL   Y V I DNL      A+  ++++    G+   F   D+
Sbjct: 8   ILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT---GKTPAFHETDV 64
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D +A+ + F  +   A +HFAA+  VGES   P++YY N   + L +L  M    V  +
Sbjct: 65  SDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRI 124
Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDF-SKNSDMAVMILR 246
           ++SS+   YG PE+ PI E  P +  NPYG+ K MAE I+ D  + +    V  LR
Sbjct: 125 VFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADPSWRVATLR 180

>pdb|1GY8|A Chain A, Trypanosoma Brucei Udp-Galactose 4' Epimerase Length = 397

Iteration: 1
 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 106/198 (53%), Gaps = 25/198 (12%)
Query: 73  VLVTGGAGYIGSHAALRLLKDS-YRVTIVDNL-----------SRGNIGAVKVLQELFPE 120
           VLV GGAGYIGSH    LL+D+ + V IVD+L           +R N+ A K+ Q   P+
Sbjct: 5   VLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENV-ARKLQQSDGPK 63
Query: 121 PGRL-QFIYADLGDAKA---VNKFFSENA-FDAVMHFAAVAYVGESTLDPLKYYHNITSN 175
           P    ++   ++GD +    +N  F+ +   DAV+H  A   VGES  DPLKYY N    
Sbjct: 64  PPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVG 123
Query: 176 TLVVLESMARHGVDTLIYSSTCATYGEP-------EKMPITEETPQAPINPYGKAKKMAE 228
            L +L++M  H  D +I+SS+ A +G P          PI     ++P +PYG++K +AE
Sbjct: 124 ILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAE 183
Query: 229 DIILDFSKNSDMAVMILR 246
            +I D ++   +  + LR
Sbjct: 184 RMIRDCAEAYGIKGICLR 201

>pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 13/175 (7%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           ++VTGGAG+IGSH   +L  +S  + ++DNLS GN       +E   E  RL  + ADL 
Sbjct: 4   IVVTGGAGFIGSHVVDKL-SESNEIVVIDNLSSGN-------EEFVNEAARL--VKADLA 53
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
            A  +  +      + V H AA   V     +P + Y N    T  +LE+M + GV  ++
Sbjct: 54  -ADDIKDYLK--GAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIV 110
Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRL 247
           ++ST   YGE + +P  E+ P  PI+ YG +K   E +I  +    DM   I R 
Sbjct: 111 FTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAWIYRF 165

>pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 19/168 (11%)
Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            ++VTGGAG+IGSH   +L++  Y V +VDNLS G    V    EL            DL
Sbjct: 2   RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELH---------VRDL 52
Query: 132 GDAKAVNKFFSENAF---DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D       +S  A    D V HFAA   V  ST +P+ +++     T  VLE   + GV
Sbjct: 53  KD-------YSWGAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGV 105
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK 236
            T++++S+   YG+ + +P  EE P  PI+ YG AK   E +   +++
Sbjct: 106 RTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYAR 153

>pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 23/168 (13%)
Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            ++VTGGAG+IGSH   +L++  Y V +VD + R   G+              +    DL
Sbjct: 2   RIVVTGGAGFIGSHLVDKLVELGYEVVVVDIVQRDTGGSA-------------ELHVRDL 48
Query: 132 GDAKAVNKFFSENAF---DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D       +S  A    D V HFAA   V  ST +P+ +++     T  VLE   + GV
Sbjct: 49  KD-------YSWGAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGV 101
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK 236
            T++++S+   YG+ + +P  EE P  PI+ YG AK   E +   +++
Sbjct: 102 RTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYAR 149

>pdb|2P5U|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8 Udp-Glucose 4- Epimerase Complex With Nad Length = 311

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 85/176 (48%), Gaps = 11/176 (6%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGGAG+IGSH    LL     V ++DNL+ G    V         P  + F   DL 
Sbjct: 3   VLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV---------PKGVPFFRVDLR 53
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D + V + F E     V H AA A V  S  DP+  +       L +LE+  ++GV+ L+
Sbjct: 54  DKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLV 113
Query: 193 YSST-CATYGE-PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           ++ST  A YGE PE     E  P  P +PY  +K   E  +  + ++  +  + LR
Sbjct: 114 FASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLR 169

>pdb|4EGB|A Chain A, 3.0 Angstrom Resolution Crystal Structure Of Dtdp-Glucose 4,6- Dehydratase (Rfbb) From Bacillus Anthracis Str. Ames In Complex With Nad Length = 346

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 72  HVLVTGGAGYIGSHAALRLLK--DSYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIY 128
           ++LVTGGAG+IGS+     L+  ++Y++   D L+  GN+  VK +Q+    P    F+ 
Sbjct: 26  NILVTGGAGFIGSNFVHYXLQSYETYKIINFDALTYSGNLNNVKSIQD---HPNYY-FVK 81
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            ++ + + +     E     +++FAA ++V  S  +P+ +Y      T+ +LE + ++  
Sbjct: 82  GEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPH 141
Query: 189 DTLIYSSTCATYGEPEKM-PITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
             L+  ST   YG   K    TEETP AP +PY  +K  A+ I L + K   + V++ R
Sbjct: 142 IKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADXIALAYYKTYQLPVIVTR 200

>pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 19/184 (10%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSY------RVTIVDNLS----RGNIGAVKVLQELFPEPG 122
           +LVTGGAG+IGSH   +LL  +Y       V ++D+L+    R N+  V        +P 
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDA------DP- 55
Query: 123 RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLES 182
           RL+F++ D+ DA  + +       DA++HFAA ++V  S      +       T  +L+ 
Sbjct: 56  RLRFVHGDIRDAGLLAREL--RGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQC 113
Query: 183 MARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
               GV  +++ ST   YG  +    TE +P  P +PY  +K  ++ +   + +   + V
Sbjct: 114 AVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDV 173
Query: 243 MILR 246
            I R
Sbjct: 174 RITR 177

>pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 19/184 (10%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSY------RVTIVDNLS----RGNIGAVKVLQELFPEPG 122
           +LVTGGAG+IGSH   +LL  +Y       V ++D+L+    R N+  V        +P 
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDA------DP- 55
Query: 123 RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLES 182
           RL+F++ D+ DA  + +       DA++HFAA ++V  S      +       T  +L+ 
Sbjct: 56  RLRFVHGDIRDAGLLAREL--RGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQC 113
Query: 183 MARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
               GV  +++ ST   YG  +    TE +P  P +PY  +K  ++ +   + +   + V
Sbjct: 114 AVDAGVGRVVHVSTDEVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDV 173
Query: 243 MILR 246
            I R
Sbjct: 174 RITR 177

>pdb|2PZK|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmg In Complex With Nad Length = 330

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 20/179 (11%)
Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +L+TGGAG +GS+     L   + + ++DN + G        +E+ P    L  I   +
Sbjct: 22  RILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGK-------REVLPPVAGLSVIEGSV 74
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARHGV 188
            DA  + + F       V+H AA AY      DP  +  +  +N   ++ V ++ ++ GV
Sbjct: 75  TDAGLLERAFDSFKPTHVVHSAA-AY-----KDPDDWAEDAATNVQGSINVAKAASKAGV 128
Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRL 247
             L+   T   YG P  +PI  ++P AP   YG +K   E  ++     SD+ V+ LRL
Sbjct: 129 KRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLM----MSDVPVVSLRL 183

>pdb|3VPS|A Chain A, Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5,6-Dehydratase, Tuna, Involved In Tunicamycin Biosynthesis Length = 321

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +L+TGGAG+IG H A  L+     VT++D+L          +  + P  G  +F+    
Sbjct: 9   RILITGGAGFIGGHLARALVASGEEVTVLDDLR---------VPPMIPPEGTGKFL---- 55
Query: 132 GDAKAVNKFFSENAFDA--VMHFAAVAYVGESTLDPLKYYHNITSNT--LVVLESMARHG 187
              K V +    +  D   V H A+   V  S   PL Y  N+ S    L +  S+   G
Sbjct: 56  --EKPVLELEERDLSDVRLVYHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSV---G 110
Query: 188 VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAK 224
           V  ++  STC  YG+ + +P  E++P +P +PY  +K
Sbjct: 111 VPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASK 147

>pdb|2HUN|A Chain A, Crystal Structure Of Hypothetical Protein Ph0414 From Pyrococcus Horikoshii Ot3 Length = 336

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 8/193 (4%)
Query: 73  VLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           +LVTGG G+IGS+    +L+    + V  +D L  G+  A   L++L  +P R  F+  D
Sbjct: 6   LLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPAN--LKDLEDDP-RYTFVKGD 62
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D + V +   +   D V+H AA ++V  S   P  + H+    T  +LES+ R   + 
Sbjct: 63  VADYELVKELVRK--VDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEV 120
Query: 191 -LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVV 249
             ++ ST   YG+  K   TE     P +PY   K  ++ ++L +++  ++   I R   
Sbjct: 121 RFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTYNLNASITRCTN 180
Query: 250 FFTLVAFVIKINP 262
            +    F  K+ P
Sbjct: 181 NYGPYQFPEKLIP 193

>pdb|2B69|A Chain A, Crystal Structure Of Human Udp-Glucoronic Acid Decarboxylase Length = 343

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 21/192 (10%)
Query: 67  EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVK--VLQELFPEPGRL 124
           E+    +L+TGGAG++GSH   +L  D + VT+VDN   G    V+  +  E F      
Sbjct: 24  EKDRKRILITGGAGFVGSHLTDKLXXDGHEVTVVDNFFTGRKRNVEHWIGHENF------ 77
Query: 125 QFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMA 184
                +L +   V   + E   D + H A+ A       +P+K     T  TL  L    
Sbjct: 78  -----ELINHDVVEPLYIE--VDQIYHLASPASPPNYXYNPIKTLKTNTIGTLNXLGLAK 130
Query: 185 RHGVDTLIYSSTCATYGEPEKMPITEE-----TPQAPINPYGKAKKMAEDIILDFSKNSD 239
           R G   L+ +ST   YG+PE  P +E+      P  P   Y + K++AE     + K   
Sbjct: 131 RVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETXCYAYXKQEG 189
Query: 240 MAVMILRLVVFF 251
           + V + R+   F
Sbjct: 190 VEVRVARIFNTF 201

>pdb|1ORR|A Chain A, Crystal Structure Of Cdp-tyvelose 2-epimerase Complexed With Nad And Cdp Length = 347

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGG G++GS+ A   L     + + DNLSR   GA   L  L    G  +F++ D+ 
Sbjct: 4   LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRK--GATDNLHWL-SSLGNFEFVHGDIR 60
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TL 191
           +   V +  ++   D+  H A    +  S  +P   +      TL +LE++ ++  +  +
Sbjct: 61  NKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNI 120
Query: 192 IYSSTCATYGEPEKMPITE---------------ETPQAPI-NPYGKAKKMAEDIILDFS 235
           IYSST   YG+ E+    E               E+ Q    +PYG +K  A+  +LD++
Sbjct: 121 IYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYA 180
Query: 236 KNSDMAVMILR 246
           +   +  ++ R
Sbjct: 181 RIFGLNTVVFR 191

>pdb|1G1A|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb)from Salmonella Enterica Serovar Typhimurium Length = 361

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTI-VDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           +L+TGGAG+IGS     ++K++    + +D L+    G ++ L ++  E  R  F +AD+
Sbjct: 3   ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYA--GNLESLSDI-SESNRYNFEHADI 59
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH----G 187
            D+  + + F +   DAVMH AA ++V  S   P  +       T  +LE   ++    G
Sbjct: 60  CDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALG 119
Query: 188 VDT-----LIYSSTCATYGE---PEK------MPI-TEETPQAPINPYGKAKKMAEDIIL 232
            D        + ST   YG+   P++      +P+ TE T  AP +PY  +K  ++ ++ 
Sbjct: 120 EDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVR 179
Query: 233 DFSKNSDMAVMILRLVVFFTLVAFVIKINP 262
            + +   +  ++      +    F  K+ P
Sbjct: 180 AWRRTYGLPTIVTNCSNNYGPYHFPEKLIP 209

>pdb|2Q1W|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmh In Complex With Nad+ Length = 333

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 17/167 (10%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V +TG  G IGSH A  LL+   +V  +DN + G        +E   +   L F+   + 
Sbjct: 24  VFITGICGQIGSHIAELLLERGDKVVGIDNFATGR-------REHLKDHPNLTFVEGSIA 76
Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTL---VVLESMARHGVD 189
           D   VN+   +   DAV+H AA      S  DP  +Y++  +N +    V+++  ++ V 
Sbjct: 77  DHALVNQLIGDLQPDAVVHTAA------SYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVG 130
Query: 190 TLIYSSTCATYG-EPEKMPITEETPQAPINPYGKAKKMAEDIILDFS 235
             +Y  T   YG +P + P+  + P+ P N      K A +  L++S
Sbjct: 131 RFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYS 177

>pdb|3RUC|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NIGAVKVLQELFPEPGRLQFIYAD 130
           L+TG AG+IGS+   +LLK +  V  +DN S G   N+  VK L     +  R  FI  D
Sbjct: 29  LITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVST-EQWSRFCFIEGD 87
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D     +       D V+H AA+  V  S +DP+       +  L +L +     V +
Sbjct: 88  IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQS 145
Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE 228
             Y+++ +TYG+   +P  EE    P++PY   K + E
Sbjct: 146 FTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNE 183

>pdb|3RU9|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NIGAVKVLQELFPEPGRLQFIYAD 130
           L+TG AG+IGS+   +LLK +  V  +DN S G   N+  VK L     +  R  FI  D
Sbjct: 29  LITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVST-EQWSRFCFIEGD 87
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D     +       D V+H AA+  V  S +DP+       +  L +L +     V +
Sbjct: 88  IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQS 145
Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE 228
             Y+++ +TYG+   +P  EE    P++PY   K + E
Sbjct: 146 FTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNE 183

>pdb|3RU7|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NIGAVKVLQELFPEPGRLQFIYAD 130
           L+TG AG+IGS+   +LLK +  V  +DN S G   N+  VK L     +  R  FI  D
Sbjct: 23  LITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVST-EQWSRFCFIEGD 81
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D     +       D V+H AA+  V  S +DP+       +  L +L +     V +
Sbjct: 82  IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQS 139
Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE 228
             Y+++ +TYG+   +P  EE    P++PY   K + E
Sbjct: 140 FTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNE 177

>pdb|3LU1|A Chain A, Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-Epimerase Length = 364

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NIGAVKVLQELFPEPGRLQFIYAD 130
           L+TG AG+IGS+   +LLK +  V  +DN S G   N+  VK L     +  R  FI  D
Sbjct: 42  LITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVST-EQWSRFCFIEGD 100
Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D     +       D V+H AA+  V  S +DP+       +  L +L +     V +
Sbjct: 101 IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQS 158
Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE 228
             Y+++ +TYG+   +P  EE    P++PY   K + E
Sbjct: 159 FTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNE 196

>pdb|1SB8|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Udp-N-Acetylglucosamine 4- Epimerase Complexed With Udp-N-Acetylgalactosamine Length = 352

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 4/180 (2%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEP--GRLQFIYADL 131
           L+TG AG+IGS+    LLK   +V  +DN + G+   +  ++ L  E      +FI  D+
Sbjct: 31  LITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDI 90
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            +    N   +    D V+H AA+  V  S  DP+          L +L +     V + 
Sbjct: 91  RNLDDCNNACA--GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSF 148
Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFF 251
            Y+++ +TYG+   +P  E+T   P++PY   K + E     FS+    + + LR    F
Sbjct: 149 TYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVF 208

>pdb|1BXK|A Chain A, Dtdp-Glucose 4,6-Dehydratase From E. Coli Length = 355

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 25/189 (13%)
Query: 73  VLVTGGAGYIGSHAALRLL--KDSYRVTIVDNLS-RGNIGAVKVLQELFP--EPGRLQFI 127
           +L+TGGAG+IGS A +R +  + S  V +VD L+  GN      L  L P  +  R  F 
Sbjct: 4   ILITGGAGFIGS-ALVRYIINETSDAVVVVDKLTYAGN------LMSLAPVAQSERFAFE 56
Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG 187
             D+ D   + + F+E+  D VMH AA ++V  S   P  +       T  +LE+ AR  
Sbjct: 57  KVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA-ARAY 115
Query: 188 VDTLI----------YSSTCATYGEPEKMP--ITEETPQAPINPYGKAKKMAEDIILDFS 235
            + L           + ST   YG+        TE TP AP +PY  +K  ++ ++  + 
Sbjct: 116 WNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWL 175
Query: 236 KNSDMAVMI 244
           +   +  +I
Sbjct: 176 RTYGLPTLI 184

>pdb|2PK3|A Chain A, Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose Reductase Length = 321

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 16/159 (10%)
Query: 69  GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIY 128
           G    L+TG AG++G + A  L + +  V      SR N       +   P    ++ I 
Sbjct: 11  GSMRALITGVAGFVGKYLANHLTEQNVEVF---GTSRNN-------EAKLPN---VEMIS 57
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+ D++ V K  S+   D + H AA + V +S L+    +      TL VL+++    +
Sbjct: 58  LDIMDSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNL 117
Query: 189 DTLIYS-STCATYGE--PEKMPITEETPQAPINPYGKAK 224
           D  I +  +   YG   PE+ P++EE    P++PYG +K
Sbjct: 118 DCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSK 156

>pdb|1T2A|A Chain A, Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydratase Length = 375

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 86/173 (49%), Gaps = 14/173 (8%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEP-----GRLQFI 127
           L+TG  G  GS+ A  LL+  Y V  IV   S  N G +   + L+  P     G ++  
Sbjct: 28  LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRI---EHLYKNPQAHIEGNMKLH 84
Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARH 186
           Y DL D+  + K  +E     + +  A ++V + + D  +Y  ++    TL +L+++   
Sbjct: 85  YGDLTDSTCLVKIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAVKTC 143
Query: 187 GVDTLI---YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK 236
           G+   +    +ST   YG+ +++P  E TP  P +PYG AK  A  I+++F +
Sbjct: 144 GLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 196

>pdb|2Z1M|A Chain A, Crystal Structure Of Gdp-D-Mannose Dehydratase From Aquifex Aeolicus Vf5 Length = 345

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 4/170 (2%)
Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
             L+TG  G  G++ A  LL+  Y V   D  S G   + + L+EL  E   ++ I+ DL
Sbjct: 5   RALITGIRGQDGAYLAKLLLEKGYEVYGADRRS-GEFASWR-LKELGIE-NDVKIIHMDL 61
Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            +   + +   +   D V + AA ++VG S   P+          L +LE++     DT 
Sbjct: 62  LEFSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTK 121
Query: 192 IY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
            Y +ST   +G+ +++P TE+TP  P +PY  AK     I +++ +  +M
Sbjct: 122 FYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNM 171

>pdb|1KEP|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Streptococcus Suis With Dtdp-Xylose Bound Length = 348

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 22/175 (12%)
Query: 72  HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
           +++VTGGAG+IGS+    +  +     VT++D L+    G    L+ +  +  R++ +  
Sbjct: 6   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYA--GNKANLEAILGD--RVELVVG 61
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
           D+ DA+ V+K  ++   DA++H+AA ++   S  DP  + H     T  +LE+  ++ + 
Sbjct: 62  DIADAELVDKLAAK--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI- 118
Query: 190 TLIYSSTCATYGE---PEKMP---------ITEETPQAPINPYGKAKKMAEDIIL 232
              + ST   YG+    E +P          T ET   P +PY  + K A D+I+
Sbjct: 119 RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPY-SSTKAASDLIV 172

>pdb|4ID9|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SUPERFAMILY Protein From Agrobacterium Tumefaciens (Target Efi-506441) With Bound Nad, Monoclinic Form 1 Length = 347

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 29/185 (15%)
Query: 69  GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIY 128
           G   +LVTG AG +G  A +  L+   R     +L     G  +V+              
Sbjct: 18  GSHMILVTGSAGRVG-RAVVAALRTQGRTVRGFDLRPSGTGGEEVV-------------- 62
Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMA 184
             L D +A++        DA+M  +AV ++G     +  D  + +      T  +L++ +
Sbjct: 63  GSLEDGQALS--------DAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAAS 114
Query: 185 RHGVDTLIYSSTCATYGE--PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAV 242
             GV   +++S+   Y E  PE +P+TE+ P  P +PYG  K + E+++    ++  M  
Sbjct: 115 AAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSGAMET 174
Query: 243 MILRL 247
           +ILR 
Sbjct: 175 VILRF 179

>pdb|1DB3|A Chain A, E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 11/175 (6%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG----RLQFIYA 129
           L+TG  G  GS+ A  LL+  Y V  +    R +    + +  ++ +P     +    Y 
Sbjct: 5   LITGVTGQDGSYLAEFLLEKGYEVHGIKR--RASSFNTERVDHIYQDPHTCNPKFHLHYG 62
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARHGV 188
           DL D   + +   E   D V +  A+++V  S   P +Y  ++ +  TL +LE++   G+
Sbjct: 63  DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESP-EYTADVDAMGTLRLLEAIRFLGL 121
Query: 189 D--TLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           +  T  Y +ST   YG  +++P  E TP  P +PY  AK  A  I +++ ++  M
Sbjct: 122 EKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGM 176

>pdb|1RPN|A Chain A, Crystal Structure Of Gdp-D-Mannose 4,6-Dehydratase In Complexes With Gdp And Nadph Length = 335

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Query: 74  LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD 133
           LVTG  G  G++ A  LL+  YRV  +  ++R +      L+EL  E G +Q+   D+ D
Sbjct: 18  LVTGITGQDGAYLAKLLLEKGYRVHGL--VARRSSDTRWRLRELGIE-GDIQYEDGDMAD 74
Query: 134 AKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIY 193
           A +V +   +     V + AA ++VG S   P+            +LE++ +   +T  Y
Sbjct: 75  ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFY 134
Query: 194 -SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN 237
            +ST   +G  +     E TP  P +PYG AK     I +++ ++
Sbjct: 135 QASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRES 179

>pdb|2HRZ|A Chain A, The Crystal Structure Of The Nucleoside-diphosphate-sugar Epimerase From Agrobacterium Tumefaciens Length = 342

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 27/190 (14%)
Query: 72  HVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNIGAVKVLQELFPE--PG 122
           H+ + G AG +G     RL+KD         + T++D           V Q   P    G
Sbjct: 16  HIAIIGAAGXVGRKLTQRLVKDGSLGGKPVEKFTLID-----------VFQPEAPAGFSG 64
Query: 123 RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLES 182
            +    ADL       K   E   D + H AA+   GE+ LD  K Y      T  + ++
Sbjct: 65  AVDARAADLSAPGEAEKLV-EARPDVIFHLAAIVS-GEAELDFDKGYRINLDGTRYLFDA 122
Query: 183 MA-RHGVD----TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN 237
           +   +G D     ++++S+ A +G P   PI +E    P+  YG  K + E ++ D+S+ 
Sbjct: 123 IRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRR 182
Query: 238 SDMAVMILRL 247
                + +RL
Sbjct: 183 GFFDGIGIRL 192

>pdb|3A1N|A Chain A, Crystal Structure Of L-Threonine Dehydrogenase From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG +G IG+     L          +   + N+ A  ++Q    + G ++FI  D+ 
Sbjct: 2   ILVTGSSGQIGTELVPYL---------AEKYGKKNVIASDIVQR---DTGGIKFITLDVS 49
Query: 133 DAKAVNKFFSENAFDAVMHFAAV-AYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
           +   +++   + + DA+ H A + +  GE   DP   Y    + T  +LE+  +H V+ +
Sbjct: 50  NRDEIDRAVEKYSIDAIFHLAGILSAKGEK--DPALAYKVNMNGTYNILEAAKQHRVEKV 107
Query: 192 IYSSTCATYG-EPEKMPITEETPQAPINPYGKAKKMAE 228
           +  ST   +G E  K  +   T   P   YG  K  AE
Sbjct: 108 VIPSTIGVFGPETPKNKVPSITITRPRTMYGVTKIAAE 145

>pdb|3A9W|A Chain A, Crystal Structure Of L-Threonine Bound L-Threonine Dehydrogenase (Y137f) From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG +G IG+     L          +   + N+ A  ++Q    + G ++FI  D+ 
Sbjct: 2   ILVTGSSGQIGTELVPYL---------AEKYGKKNVIASDIVQR---DTGGIKFITLDVS 49
Query: 133 DAKAVNKFFSENAFDAVMHFAAV-AYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
           +   +++   + + DA+ H A + +  GE   DP   Y    + T  +LE+  +H V+ +
Sbjct: 50  NRDEIDRAVEKYSIDAIFHLAGILSAKGEK--DPALAYKVNMNGTYNILEAAKQHRVEKV 107
Query: 192 IYSSTCATYG-EPEKMPITEETPQAPINPYGKAKKMAE 228
           +  ST   +G E  K  +   T   P   +G  K  AE
Sbjct: 108 VIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAE 145

>pdb|1I24|A Chain A, High Resolution Crystal Structure Of The Wild-Type Protein Sqd1, With Nad And Udp-Glucose Length = 404

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 61/151 (40%), Gaps = 18/151 (11%)
Query: 71  THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP----------- 119
           + V+V GG GY G   AL L K +Y V IVDNL R        L+ L P           
Sbjct: 12  SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRW 71
Query: 120 ---EPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLK---YYHNIT 173
                  ++    D+ D + + + F     D+V+HF        S +D  +     HN  
Sbjct: 72  KALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNV 131
Query: 174 SNTLVVLESMARHGVDT-LIYSSTCATYGEP 203
             TL VL ++   G +  L+   T   YG P
Sbjct: 132 IGTLNVLFAIKEFGEECHLVKLGTMGEYGTP 162

>pdb|1QRR|A Chain A, Crystal Structure Of Sqd1 Protein Complex With Nad And Udp- Glucose Length = 394

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 18/149 (12%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP------------- 119
           V+V GG GY G   AL L K +Y V IVDNL R        L+ L P             
Sbjct: 4   VMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA 63
Query: 120 -EPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLK---YYHNITSN 175
                ++    D+ D + + + F     D+V+HF        S +D  +     HN    
Sbjct: 64  LTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIG 123
Query: 176 TLVVLESMARHGVDT-LIYSSTCATYGEP 203
           TL VL ++   G +  L+   T   YG P
Sbjct: 124 TLNVLFAIKEFGEECHLVKLGTMGEYGTP 152

>pdb|2PZJ|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmf In Complex With Nad+ Length = 377

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 17/166 (10%)
Query: 71  THVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
           T+V+V GGAG++GS+   RLL+    +V +VDNL    + A K+     P+   ++F   
Sbjct: 33  TNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNL----LSAEKI---NVPDHPAVRFSET 85
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR-HGV 188
            + D   +     E  +D V H A       S  DPL  + N T  TL + E +     +
Sbjct: 86  SITDDALLASLQDE--YDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRL 143
Query: 189 DTLIYSSTCATYGEP--EKMPITEETPQAPIN----PYGKAKKMAE 228
             ++YS+   +  E   +    TEET    ++    PY  +K   E
Sbjct: 144 KKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGE 189

>pdb|1I2B|A Chain A, Crystal Structure Of Mutant T145a Sqd1 Protein Complex With Nad And Udp-SulfoquinovoseUDP-Glucose Length = 404

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 18/151 (11%)
Query: 71  THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP----------- 119
           + V+V GG GY G   AL L K +Y V IVDNL R        L+ L P           
Sbjct: 12  SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRW 71
Query: 120 ---EPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLK---YYHNIT 173
                  ++    D+ D + + + F     D+V+HF        S +D  +     HN  
Sbjct: 72  KALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNV 131
Query: 174 SNTLVVLESMARHGVDT-LIYSSTCATYGEP 203
             TL VL ++   G +  L+       YG P
Sbjct: 132 IGTLNVLFAIKEFGEECHLVKLGAMGEYGTP 162

>pdb|3AY3|A Chain A, Crystal Structure Of Glucuronic Acid Dehydrogeanse From Chromohalobacter Salexigens Length = 267

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 83/187 (44%), Gaps = 27/187 (14%)
Query: 70  VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
           +  +LVTG AG +GS     L   ++ V + D +   ++GA +  +E+         +  
Sbjct: 2   LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIV---DLGAAEAHEEI---------VAC 49
Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLV----VLESMAR 185
           DL DA+AV+    +   D ++H   V+          + +++I    ++    + E+   
Sbjct: 50  DLADAQAVHDLVKD--CDGIIHLGGVSVE--------RPWNDILQANIIGAYNLYEAARN 99
Query: 186 HGVDTLIYSSTCATYGE-PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMI 244
            G   ++++S+  T G  P    I  E P+ P + YG +K   ED+   +    D+  + 
Sbjct: 100 LGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETLN 159
Query: 245 LRLVVFF 251
           +R+   F
Sbjct: 160 IRIGSCF 166

>pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 44/204 (21%)
Query: 73  VLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           V VTG +G+IGS   +RLL+  Y  R T+ D     N+  VK L +L      L    AD
Sbjct: 8   VCVTGASGFIGSWLVMRLLERGYTVRATVRDPT---NVKKVKHLLDLPKAETHLTLWKAD 64
Query: 131 LGDAKAVNKFFSENAFD-AVMHFAAVAYVGESTLDPLKYYHNITSNTLV--VLESM---- 183
           L D         E +FD A+     V +V      P+ +      N ++   +E M    
Sbjct: 65  LAD---------EGSFDEAIKGCTGVFHVAT----PMDFESKDPENEVIKPTIEGMLGIM 111
Query: 184 ----ARHGVDTLIYSSTCATYG-EPEKMPITEETPQAPINPYGKAKKM-----------A 227
               A   V  L+++S+  T   +  ++P+ +E+  + +  + +AKKM           A
Sbjct: 112 KSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDME-FCRAKKMTAWMYFVSKTLA 170
Query: 228 EDIILDFSK--NSDMAVMILRLVV 249
           E     ++K  N D   +I  LVV
Sbjct: 171 EQAAWKYAKENNIDFITIIPTLVV 194

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	267
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	6e-82
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	4e-73
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	9e-73
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	4e-71
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	4e-70
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	8e-69
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	2e-68
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	3e-67
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	1e-65
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	9e-63
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	7e-53
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	5e-51
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	5e-49
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	3e-48
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	1e-47
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	2e-46
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	1e-45
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	2e-43
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	4e-40
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	7e-40
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	1e-38
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	1e-38
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	3e-37
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	9e-36
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	2e-34
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	5e-29
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	5e-28
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	2e-26
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	3e-24
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	1e-23
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	3e-23
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	8e-23
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	2e-21
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	2e-21
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	4e-20
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	6e-20
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	2e-19
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	7e-19
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	2e-18
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	9e-18
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	3e-17
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	2e-15
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	6e-14
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	3e-13
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	4e-13
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	4e-12
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	3e-11
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	7e-11
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	3e-10
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	3e-10
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	8e-10
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	9e-10
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	1e-09
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	2e-09
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	2e-09
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	1e-08
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	2e-08
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	3e-08
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	4e-07
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	9e-07
1xq6_A	253	Unknown protein; structural genomics, protein stru	1e-06
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	2e-06
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	8e-06
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	1e-05
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	1e-05
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	2e-05
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	5e-05
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	5e-05
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	5e-05
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	5e-05
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	6e-05
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	9e-05
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	1e-04
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	1e-04
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	1e-04
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	2e-04
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	2e-04
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	2e-04
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	2e-04
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	2e-04
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	2e-04
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	3e-04
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	3e-04
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-04
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	3e-04
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-04
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	4e-04
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	5e-04
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	5e-04
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	5e-04
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	5e-04
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	5e-04
1xkq_A	280	Short-chain reductase family member (5D234); parra	6e-04
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	6e-04
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	6e-04
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	7e-04
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	8e-04
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	8e-04

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score =  248 bits (635), Expect = 6e-82
 Identities = 69/174 (39%), Positives = 95/174 (54%), Gaps = 9/174 (5%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+ GGAGYIGSHA  +L+ +   V +VDNL  G+  A+             +F   DL 
Sbjct: 4   ILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAI---------TEGAKFYNGDLR 54

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D   +   F++   +AVMHFAA + VG S   PL+YY+N     L +LE M    VD  I
Sbjct: 55  DKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFI 114

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           +SST ATYGE +   ITEET   P N YG+ K   E ++  +S+ S++   I R
Sbjct: 115 FSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFR 168

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score =  225 bits (576), Expect = 4e-73
 Identities = 47/194 (24%), Positives = 79/194 (40%), Gaps = 20/194 (10%)

Query: 59  SPSPFSQHEEGVT------HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVK 112
           S      H  G+        +L+TGGAG +GS+     L   + + ++DN + G    + 
Sbjct: 3   SSHHHHHHSSGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVL- 61

Query: 113 VLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNI 172
                 P    L  I   + DA  + + F       V+H AA     +   D  +     
Sbjct: 62  ------PPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAAYKDPD---DWAEDAATN 112

Query: 173 TSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIIL 232
              ++ V ++ ++ GV  L+   T   YG P  +PI  ++P AP   YG +K   E  ++
Sbjct: 113 VQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLM 172

Query: 233 DFSKNSDMAVMILR 246
                 D+ V+ LR
Sbjct: 173 MS----DVPVVSLR 182

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397

 Score =  227 bits (580), Expect = 9e-73
 Identities = 64/197 (32%), Positives = 95/197 (48%), Gaps = 23/197 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVL--------------QEL 117
           VLV GGAGYIGSH    LL+D+ + V IVD+L   +  +  V                + 
Sbjct: 5   VLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKP 64

Query: 118 FPEPGRLQFIYADLGDAKAVNKFFSENA-FDAVMHFAAVAYVGESTLDPLKYYHNITSNT 176
                       D+ +   +N  F+ +   DAV+H  A   VGES  DPLKYY N     
Sbjct: 65  PWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGI 124

Query: 177 LVVLESMARHGVDTLIYSSTCATYGEP-------EKMPITEETPQAPINPYGKAKKMAED 229
           L +L++M  H  D +I+SS+ A +G P          PI     ++P +PYG++K +AE 
Sbjct: 125 LRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAER 184

Query: 230 IILDFSKNSDMAVMILR 246
           +I D ++   +  + LR
Sbjct: 185 MIRDCAEAYGIKGICLR 201

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score =  220 bits (562), Expect = 4e-71
 Identities = 60/176 (34%), Positives = 85/176 (48%), Gaps = 11/176 (6%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGGAG+IGSH    LL     V ++DNL+ G    V         P  + F   DL 
Sbjct: 3   VLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV---------PKGVPFFRVDLR 53

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D + V + F E     V H AA A V  S  DP+  +       L +LE+  ++GV+ L+
Sbjct: 54  DKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLV 113

Query: 193 YSST-CATYGE-PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           ++ST  A YGE PE     E  P  P +PY  +K   E  +  + ++  +  + LR
Sbjct: 114 FASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLR 169

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341

 Score =  218 bits (558), Expect = 4e-70
 Identities = 68/176 (38%), Positives = 95/176 (53%), Gaps = 5/176 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
           +LVTGGAGYIGSH A+ LL   Y V I DNL      A+  ++++    G    F   D+
Sbjct: 8   ILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKI---TGKTPAFHETDV 64

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D +A+ + F  +   A +HFAA+  VGES   P++YY N   + L +L  M    V  +
Sbjct: 65  SDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRI 124

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
           ++SS+   YG PE+ PI E  P +  NPYG+ K MAE I+ D    +    V  LR
Sbjct: 125 VFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADPSWRVATLR 180

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338

 Score =  215 bits (549), Expect = 8e-69
 Identities = 66/177 (37%), Positives = 100/177 (56%), Gaps = 6/177 (3%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L    G    F+  D+
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL---GGKHPTFVEGDI 59

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   
Sbjct: 60  RNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNF 119

Query: 192 IYSSTCATYGEPEKMPITEETP-QAPINPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
           I+SS+   YG+  K+P  E  P   P +PYGK+K M E I+ D  K   D ++ +LR
Sbjct: 120 IFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLR 176

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score =  213 bits (544), Expect = 2e-68
 Identities = 54/175 (30%), Positives = 82/175 (46%), Gaps = 13/175 (7%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            ++VTGGAG+IGSH   +L +    + ++DNLS GN   V             + + ADL
Sbjct: 3   LIVVTGGAGFIGSHVVDKLSES-NEIVVIDNLSSGNEEFV---------NEAARLVKADL 52

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
                 +        + V H AA   V     +P + Y N    T  +LE+M + GV  +
Sbjct: 53  AADDIKDYLKG---AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRI 109

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           +++ST   YGE + +P  E+ P  PI+ YG +K   E +I  +    DM   I R
Sbjct: 110 VFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAWIYR 164

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score =  210 bits (536), Expect = 3e-67
 Identities = 55/174 (31%), Positives = 85/174 (48%), Gaps = 13/174 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           ++VTGGAG+IGSH   +L++  Y V +VDNLS G    V             +    DL 
Sbjct: 3   IVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV---------NPSAELHVRDLK 53

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D             D V HFAA   V  ST +P+ +++     T  VLE   + GV T++
Sbjct: 54  DYSWGAGIK----GDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVV 109

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           ++S+   YG+ + +P  EE P  PI+ YG AK   E +   +++   +  + +R
Sbjct: 110 FASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVR 163

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348

 Score =  207 bits (529), Expect = 1e-65
 Identities = 69/183 (37%), Positives = 101/183 (55%), Gaps = 12/183 (6%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS------RGNIGAVKVLQELFPEPG-RLQ 125
           VLVTGGAGYIGSH  L LL+  Y   ++DN             +++ +QEL    G  ++
Sbjct: 5   VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL---TGRSVE 61

Query: 126 FIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR 185
           F   D+ D  A+ + F + +F AV+HFA +  VGES   PL YY    + T+ +LE M  
Sbjct: 62  FEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA 121

Query: 186 HGVDTLIYSSTCATYGEPEKMPITEETP-QAPINPYGKAKKMAEDIILDFSK-NSDMAVM 243
           HGV  L++SS+   YG P+ +P+ E  P     NPYGK+K   E++I D  + +     +
Sbjct: 122 HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAV 181

Query: 244 ILR 246
           +LR
Sbjct: 182 LLR 184

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score =  208 bits (530), Expect = 9e-63
 Identities = 74/180 (41%), Positives = 98/180 (54%), Gaps = 8/180 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGGAGYIGSH  + L+++ Y   + DNLS     +V  L+ L      + F   DL 
Sbjct: 14  VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKH--HIPFYEVDLC 71

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D K + K F E   D+V+HFA +  VGEST  PL+YYHN    T+V+LE M ++ V   +
Sbjct: 72  DRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFV 131

Query: 193 YSSTCATYGE----PEKMPITEETPQAPINPYGKAKKMAEDIILDFSK--NSDMAVMILR 246
           +SS+   YG+    P  +PI EE P  P NPYG  K   E+I+ D            ILR
Sbjct: 132 FSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILR 191

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score =  175 bits (446), Expect = 7e-53
 Identities = 51/206 (24%), Positives = 73/206 (35%), Gaps = 31/206 (15%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG--------- 122
            V+V GG GY G   AL L K +Y V IVDNL R        L+ L P            
Sbjct: 13  RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 72

Query: 123 -----RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDP---LKYYHNITS 174
                 ++    D+ D + + + F     D+V+HF        S +D    +   HN   
Sbjct: 73  ALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVI 132

Query: 175 NTLVVLESMARHGVDT-LIYSSTCATYGEPEK------MPITEE-------TPQAPINPY 220
            TL VL ++   G +  L+   T   YG P        + IT          P+   + Y
Sbjct: 133 GTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFY 192

Query: 221 GKAKKMAEDIILDFSKNSDMAVMILR 246
             +K      I    K   +    L 
Sbjct: 193 HLSKVHDSHNIAFTCKAWGIRATDLN 218

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score =  169 bits (430), Expect = 5e-51
 Identities = 44/188 (23%), Positives = 74/188 (39%), Gaps = 23/188 (12%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNIGAVKVLQELFPEPGRL 124
           H+ + G AG +G     RL+KD         + T++D                    G +
Sbjct: 16  HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGF---------SGAV 66

Query: 125 QFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMA 184
               ADL       K   E   D + H AA+   GE+ LD  K Y      T  + +++ 
Sbjct: 67  DARAADLSAPGEAEKLV-EARPDVIFHLAAIV-SGEAELDFDKGYRINLDGTRYLFDAIR 124

Query: 185 RHGVDT-----LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSD 239
                      ++++S+ A +G P   PI +E    P+  YG  K + E ++ D+S+   
Sbjct: 125 IANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGF 184

Query: 240 MAVMILRL 247
              + +RL
Sbjct: 185 FDGIGIRL 192

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score =  163 bits (416), Expect = 5e-49
 Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 25/185 (13%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V +TG  G IGSH A  LL+   +V  +DN + G    +        +   L F+   + 
Sbjct: 24  VFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHL-------KDHPNLTFVEGSIA 76

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARHGVD 189
           D   VN+   +   DAV+H AA          P  +Y++  +N      V+++  ++ V 
Sbjct: 77  DHALVNQLIGDLQPDAVVHTAASYKD------PDDWYNDTLTNCVGGSNVVQAAKKNNVG 130

Query: 190 TLIYSSTCATYG-EPEKMPITEETPQAPIN-PYGKAKKMAEDIILDFSKNSDMAVMILRL 247
             +Y  T   YG +P + P+  + P+ P N  Y  +K   E    D+ + S +  +  R 
Sbjct: 131 RFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANE----DYLEYSGLDFVTFR- 185

Query: 248 VVFFT 252
                
Sbjct: 186 --LAN 188

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score =  162 bits (412), Expect = 3e-48
 Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 11/184 (5%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NIGAVKVLQELFPEPGRLQFIYA 129
            L+TG AG+IGS+    LLK   +V  +DN + G   N+  V+ L          +FI  
Sbjct: 30  WLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWS-NFKFIQG 88

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGV 188
           D+ +    N   +    D V+H AA+  V  S  DP+     NI    L +L +     V
Sbjct: 89  DIRNLDDCNNACAG--VDYVLHQAALGSVPRSINDPITSNATNIDG-FLNMLIAARDAKV 145

Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLV 248
            +  Y+++ +TYG+   +P  E+T   P++PY   K + E     FS+    + + LR  
Sbjct: 146 QSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLR-- 203

Query: 249 VFFT 252
            +F 
Sbjct: 204 -YFN 206

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score =  160 bits (406), Expect = 1e-47
 Identities = 34/181 (18%), Positives = 63/181 (34%), Gaps = 22/181 (12%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            + VTGG G++G +    +  D     I+                       +      +
Sbjct: 4   KIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNK---------------AINDYEYRV 48

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
            D    +     N  DAV+H AA         +    + N    T  + ++   + +  +
Sbjct: 49  SDYTLEDLINQLNDVDAVVHLAATRGSQGKISEF---HDNEIL-TQNLYDACYENNISNI 104

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFF 251
           +Y+ST + Y +   +P  E+    P   YG +K   E I   +S+   + +  LR   F 
Sbjct: 105 VYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLR---FA 161

Query: 252 T 252
            
Sbjct: 162 H 162

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score =  157 bits (400), Expect = 2e-46
 Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 11/185 (5%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NIGAVKVLQELFPEPGRLQFIY 128
             L+TG AG+IGS+   +LLK +  V  +DN S G   N+  VK L        R  FI 
Sbjct: 27  TWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWS-RFCFIE 85

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHG 187
            D+ D     +       D V+H AA+  V  S +DP+     NIT   L +L +     
Sbjct: 86  GDIRDLTTCEQVMKG--VDHVLHQAALGSVPRSIVDPITTNATNITG-FLNILHAAKNAQ 142

Query: 188 VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRL 247
           V +  Y+++ +TYG+   +P  EE    P++PY   K + E     +++      + LR 
Sbjct: 143 VQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLR- 201

Query: 248 VVFFT 252
             +F 
Sbjct: 202 --YFN 204

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score =  154 bits (392), Expect = 1e-45
 Identities = 51/181 (28%), Positives = 79/181 (43%), Gaps = 18/181 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGGAG+IG H A  L+     VT++D+L    +   +   +   +P   +    DL 
Sbjct: 10  ILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVL-ELEERDLS 68

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D               V H A+   V  S   PL Y  N+ S    +L      GV  ++
Sbjct: 69  D------------VRLVYHLASHKSVPRSFKQPLDYLDNVDS-GRHLLALCTSVGVPKVV 115

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM-AVMILRLVVFF 251
             STC  YG+ + +P  E++P +P +PY  +K   E +     + S    V I+R   FF
Sbjct: 116 VGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRASVAPEVGIVR---FF 172

Query: 252 T 252
            
Sbjct: 173 N 173

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score =  147 bits (374), Expect = 2e-43
 Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 19/175 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG AG +GS     L   ++ V + D +  G                  + +  DL 
Sbjct: 5   LLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA------------AEAHEEIVACDLA 52

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           DA+AV+    +   D ++H   V  V     D L+   NI      + E+    G   ++
Sbjct: 53  DAQAVHDLVKD--CDGIIHLGGV-SVERPWNDILQ--ANIIG-AYNLYEAARNLGKPRIV 106

Query: 193 YSSTCATYGE-PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           ++S+  T G  P    I  E P+ P + YG +K   ED+   +    D+  + +R
Sbjct: 107 FASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIR 161

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score =  140 bits (354), Expect = 4e-40
 Identities = 39/184 (21%), Positives = 74/184 (40%), Gaps = 22/184 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRG----NIGAVKVLQELFPEPGRLQFI 127
           ++VTGGAG+IGS+    L       + +VDNL  G    N+  + +   +  E       
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKE------- 54

Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG 187
             D        + F +   +A+ H  A +   E     +   +N    +  +L       
Sbjct: 55  --DFLIQIMAGEEFGD--VEAIFHEGACSSTTEWDGKYM-MDNNYQY-SKELLHYCLERE 108

Query: 188 VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRL 247
           +   +Y+S+ ATYG      I     + P+N YG +K + ++ +      ++  ++  R 
Sbjct: 109 IP-FLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFR- 166

Query: 248 VVFF 251
             +F
Sbjct: 167 --YF 168

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score =  139 bits (353), Expect = 7e-40
 Identities = 39/185 (21%), Positives = 79/185 (42%), Gaps = 21/185 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           +LVTG +G IG+     L +   +  ++  ++ + +              G ++FI  D+
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRD-------------TGGIKFITLDV 48

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDT 190
            +   +++   + + DA+ H A +    +   DP   Y  N+   T  +LE+  +H V+ 
Sbjct: 49  SNRDEIDRAVEKYSIDAIFHLAGILSA-KGEKDPALAYKVNMNG-TYNILEAAKQHRVEK 106

Query: 191 LIYSSTCATYG-EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVV 249
           ++  ST   +G E  K  +   T   P   +G  K  AE +   + +   + V  LR   
Sbjct: 107 VVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLR--- 163

Query: 250 FFTLV 254
           +  ++
Sbjct: 164 YPGII 168

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score =  137 bits (347), Expect = 1e-38
 Identities = 38/180 (21%), Positives = 71/180 (39%), Gaps = 14/180 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           ++VTGGAG+IGS+    L       + +VDNL  G       L +L            D 
Sbjct: 49  IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT--KFVNLVDLNI---ADYMDKEDF 103

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
                  + F +   +A+ H  A +   E     +   +N    +  +L       +   
Sbjct: 104 LIQIMAGEEFGD--VEAIFHEGACSSTTEWDGKYM-MDNNYQY-SKELLHYCLEREI-PF 158

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFF 251
           +Y+S+ ATYG      I     + P+N +G +K + ++ +      ++  ++  R   +F
Sbjct: 159 LYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFR---YF 215

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score =  134 bits (340), Expect = 1e-38
 Identities = 40/178 (22%), Positives = 68/178 (38%), Gaps = 23/178 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG AG +G     RL   +  + + D            L  L P     + +  DL 
Sbjct: 6   LLVTGAAGQLGRVMRERLAPMAEILRLAD------------LSPLDPAGPNEECVQCDLA 53

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH--NITSNTLVVLESMARHGVDT 190
           DA AVN   +    D ++H         S   P +     NI      + E+   HG   
Sbjct: 54  DANAVNAMVAG--CDGIVHLGG-----ISVEKPFEQILQGNIIG-LYNLYEAARAHGQPR 105

Query: 191 LIYSSTCATYGE-PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRL 247
           ++++S+  T G  P+   +  + P  P   YG +K   E++   +         ++R+
Sbjct: 106 IVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKFGQETALVRI 163

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score =  132 bits (334), Expect = 3e-37
 Identities = 32/185 (17%), Positives = 61/185 (32%), Gaps = 18/185 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           +L+ G  G IG+    +L K       I  ++ + N   V              F   + 
Sbjct: 5   ILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVN----------SGPFEVVNA 54

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDT 190
            D   +      +    +   AA+     +  +P   +  N+ S    VL       +  
Sbjct: 55  LDFNQIEHLVEVHKITDIYLMAALLSA-TAEKNPAFAWDLNMNS-LFHVLNLAKAKKIKK 112

Query: 191 LIYSSTCATYGEPEKMPITEE-TPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVV 249
           + + S+ A +G       T + T   P   YG +K+  E     +     + V  +R   
Sbjct: 113 IFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIYGVDVRSIR--- 169

Query: 250 FFTLV 254
           +  L+
Sbjct: 170 YPGLI 174

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score =  130 bits (328), Expect = 9e-36
 Identities = 45/195 (23%), Positives = 76/195 (38%), Gaps = 17/195 (8%)

Query: 60  PSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELF 118
           P   +  +   T+V+V GGAG++GS+   RLL+    +V +VDNL       V       
Sbjct: 22  PVIMNASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINV------- 74

Query: 119 PEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLV 178
           P+   ++F    + D   +     E  +D V H A       S  DPL  + N T  TL 
Sbjct: 75  PDHPAVRFSETSITDDALLASLQDE--YDYVFHLATYHGNQSSIHDPLADHENNTLTTLK 132

Query: 179 VLESMARH-GVDTLIYSSTCATYGEPEKMPITEE------TPQAPINPYGKAKKMAEDII 231
           + E +     +  ++YS+   +  E               +     +PY  +K   E   
Sbjct: 133 LYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYS 192

Query: 232 LDFSKNSDMAVMILR 246
           + + K   +  +  R
Sbjct: 193 VYYHKQHQLPTVRAR 207

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score =  126 bits (319), Expect = 2e-34
 Identities = 40/186 (21%), Positives = 76/186 (40%), Gaps = 16/186 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFP----EPGRLQF 126
           +L+TGGAG++GS+ A    ++    +V ++D      + +      L         + + 
Sbjct: 13  ILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEV 72

Query: 127 IYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
           I AD+ +   + +    + FD + H AAV+       +            L +LE     
Sbjct: 73  IAADINNPLDLRRLEKLH-FDYLFHQAAVSDTTML--NQELVMKTNYQAFLNLLEIARSK 129

Query: 187 GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
               +IY+S+   YG  +  P      ++P N YG +K   ++ +L  S ++      LR
Sbjct: 130 KAK-VIYASSAGVYGNTK-APNVVGKNESPENVYGFSKLCMDEFVLSHSNDNVQV--GLR 185

Query: 247 LVVFFT 252
              +F 
Sbjct: 186 ---YFN 188

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score =  112 bits (281), Expect = 5e-29
 Identities = 37/185 (20%), Positives = 71/185 (38%), Gaps = 25/185 (13%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           + +TG  G+I SH A RL  + + V   D     ++       E        +F   DL 
Sbjct: 32  ISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TEDMFCD---EFHLVDLR 82

Query: 133 DAKAVNKFFSENAFDAVMHFAAVA----YVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
             +   K       D V + AA      ++     +     +N T  +  ++E+   +G+
Sbjct: 83  VMENCLKVTEG--VDHVFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMIEAARINGI 137

Query: 189 DTLIYSSTCATYGEPEKMPITEET-------PQAPINPYGKAKKMAEDIILDFSKNSDMA 241
               Y+S+   Y E +++  T  +       P  P + +G  K   E++   ++K+  + 
Sbjct: 138 KRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIE 197

Query: 242 VMILR 246
             I R
Sbjct: 198 CRIGR 202

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score =  108 bits (273), Expect = 5e-28
 Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 26/172 (15%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR-GNIGAVKVLQELFPEPGRLQFIYADL 131
           +L+TGG G++GS+ A   L     + + DNLSR G    +  L  L    G  +F++ D+
Sbjct: 4   LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL----GNFEFVHGDI 59

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDT 190
            +   V +  ++   D+  H A    +  S  +P   +  N+   TL +LE++ ++  + 
Sbjct: 60  RNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGG-TLNLLEAVRQYNSNC 118

Query: 191 -LIYSSTCATYGEPEKMPI----------------TEETPQAPINPYG--KA 223
            +IYSST   YG+ E+                    E T     +PYG  K 
Sbjct: 119 NIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKG 170

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  104 bits (261), Expect = 2e-26
 Identities = 26/180 (14%), Positives = 57/180 (31%), Gaps = 21/180 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
             V G  G +G HAA  +    + + +   + R     ++ L  L       +   A++ 
Sbjct: 16  YAVLGATGLLGHHAARAIRAAGHDLVL---IHR-PSSQIQRLAYL-----EPECRVAEML 66

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDTL 191
           D   + +       D V+  A             +     +   T     +  +  V  +
Sbjct: 67  DHAGLERALRG--LDGVIFSAGY--YPSRPRRWQEEVASALGQ-TNPFYAACLQARVPRI 121

Query: 192 IYSSTCATYGE-PEKMPITEETPQAP----INPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           +Y  +       P+ +P  E           + Y   K   ++   + ++N  + V+I  
Sbjct: 122 LYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARN-GLPVVIGI 180

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score = 99.1 bits (247), Expect = 3e-24
 Identities = 35/183 (19%), Positives = 71/183 (38%), Gaps = 17/183 (9%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            VL+ G  G+IG H + R+L+ +       ++    +       +L     R+ F   D+
Sbjct: 26  KVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRL------GDLVKHE-RMHFFEGDI 78

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
              K   ++  +   D ++   A+A        PL+ +       L ++ S  ++G   L
Sbjct: 79  TINKEWVEYHVKK-CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGK-HL 136

Query: 192 IYSSTCATYG---EPEKMPITEETPQAPINP----YGKAKKMAEDIILDFSKNSDMAVMI 244
           ++ ST   YG   + +  P        PIN     Y  +K++ + +I  +     +   +
Sbjct: 137 VFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME-GLNFTL 195

Query: 245 LRL 247
            R 
Sbjct: 196 FRP 198

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 97.3 bits (242), Expect = 1e-23
 Identities = 25/176 (14%), Positives = 53/176 (30%), Gaps = 49/176 (27%)

Query: 73  VLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           +++TG  G++G +    L     + +  V   +                           
Sbjct: 3   IVITGAKGFVGKNLKADLTSTTDHHIFEVHRQT--------------------------- 35

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
              + +     +   D ++H A V           ++     S    VL+ + R+     
Sbjct: 36  -KEEELESALLK--ADFIVHLAGVNRP----EHDKEFSLGNVSYLDHVLDILTRNTKKPA 88

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRL 247
           I  S+                     NPYG++K   E ++ ++++     V I R 
Sbjct: 89  ILLSS--------------SIQATQDNPYGESKLQGEQLLREYAEEYGNTVYIYRW 130

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score = 95.9 bits (239), Expect = 3e-23
 Identities = 37/183 (20%), Positives = 71/183 (38%), Gaps = 18/183 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           VL+ G  G+IG+H   RLL++  Y V  +D  S         +      P    F+  D+
Sbjct: 3   VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDA-------ISRFLNHP-HFHFVEGDI 54

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
                  ++  +   D V+   A+A   E T +PL+ +       L ++    ++    +
Sbjct: 55  SIHSEWIEYHVKKC-DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RI 112

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINP-------YGKAKKMAEDIILDFSKNSDMAVMI 244
           I+ ST   YG        E+     + P       Y  +K++ + +I  + +   +   +
Sbjct: 113 IFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 172

Query: 245 LRL 247
            R 
Sbjct: 173 FRP 175

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score = 94.8 bits (236), Expect = 8e-23
 Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 17/181 (9%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +L+TGGAG++GSH   +L+ D + VT+VDN   G     + ++         + I  D+
Sbjct: 29  RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRK---RNVEHWIGHE-NFELINHDV 84

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
                V   + E   D + H A+ A       +P+K     T  TL +L    R G   L
Sbjct: 85  -----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RL 136

Query: 192 IYSSTCATYGEPEKMPITEE-----TPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           + +ST   YG+PE  P +E+      P  P   Y + K++AE +   + K   + V + R
Sbjct: 137 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 196

Query: 247 L 247
           +
Sbjct: 197 I 197

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} Length = 346

 Score = 91.0 bits (227), Expect = 2e-21
 Identities = 45/164 (27%), Positives = 84/164 (51%), Gaps = 15/164 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLK--DSYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYA 129
           +LVTGGAG+IGS+    +L+  ++Y++   D L+  GN+     ++ +   P    F+  
Sbjct: 27  ILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNN---VKSIQDHP-NYYFVKG 82

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARH 186
           ++ + + +     E     +++FAA ++V  S  +P+ +     +N   T+ +LE + ++
Sbjct: 83  EIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPF---YDTNVIGTVTLLELVKKY 139

Query: 187 GVDTLIYSSTCATYGE-PEKMPITEETPQAPINPYGKAKKMAED 229
               L+  ST   YG   +    TEETP AP +PY  + K + D
Sbjct: 140 PHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPY-SSSKASAD 182

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337

 Score = 90.6 bits (226), Expect = 2e-21
 Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 20/168 (11%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDS------YRVTIVDNLS-RGNIGAVKVLQELFPEPGRL 124
            +LVTGGAG+IGSH   +LL  +        V ++D+L+  GN      L  +  +P RL
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRAN---LAPVDADP-RL 57

Query: 125 QFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLE 181
           +F++ D+ DA  + +       DA++HFAA ++V  S      +     +N   T  +L+
Sbjct: 58  RFVHGDIRDAGLLARELRG--VDAIVHFAAESHVDRSIAGASVF---TETNVQGTQTLLQ 112

Query: 182 SMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED 229
                GV  +++ ST   YG  +    TE +P  P +PY  A K   D
Sbjct: 113 CAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYA-ASKAGSD 159

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* Length = 348

 Score = 87.2 bits (217), Expect = 4e-20
 Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 23/164 (14%)

Query: 72  HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIY 128
           +++VTGGAG+IGS+    +  +     VT++D L+  GN   ++ +        R++ + 
Sbjct: 6   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI-----LGDRVELVV 60

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHG 187
            D+ DA+ V+K  ++   DA++H+AA ++   S  DP  + H N    T  +LE+  ++ 
Sbjct: 61  GDIADAELVDKLAAK--ADAIVHYAAESHNDNSLNDPSPFIHTNFIG-TYTLLEAARKYD 117

Query: 188 V-------D----TLIYSSTCATYGEPEKMPITEETPQAPINPY 220
           +       D     L        +GE      T ET   P +PY
Sbjct: 118 IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPY 161

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} Length = 336

 Score = 86.4 bits (215), Expect = 6e-20
 Identities = 51/165 (30%), Positives = 77/165 (46%), Gaps = 17/165 (10%)

Query: 72  HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIY 128
            +LVTGG G+IGS+    +L+    + V  +D L    N   +K L++   +P R  F+ 
Sbjct: 5   KLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLED---DP-RYTFVK 60

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMAR 185
            D+ D + V +   +   D V+H AA ++V  S   P  +   + SN   T  +LES+ R
Sbjct: 61  GDVADYELVKELVRK--VDGVVHLAAESHVDRSISSPEIF---LHSNVIGTYTLLESIRR 115

Query: 186 HGVDTLIYS-STCATYGEPEKMPITEETPQAPINPYGKAKKMAED 229
              +      ST   YG+  K   TE     P +PY  A K A D
Sbjct: 116 ENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPY-SATKAASD 159

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 83.6 bits (207), Expect = 2e-19
 Identities = 27/185 (14%), Positives = 61/185 (32%), Gaps = 21/185 (11%)

Query: 68  EGVTHVLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQF 126
           E V  +++ G +G++GS      L   + VT +V +  +           +  E   L+ 
Sbjct: 2   EKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEK-----------IKIENEHLKV 50

Query: 127 IYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
             AD+     V +       DAV+      +      D            L +++ + + 
Sbjct: 51  KKADVSSLDEVCEVC--KGADAVISAFNPGWNNPDIYDET------IKVYLTIIDGVKKA 102

Query: 187 GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           GV+  +      +      + +  ++ + P N     K + E  +    K  ++  +   
Sbjct: 103 GVNRFLMVGGAGSLFIAPGLRLM-DSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFS 161

Query: 247 LVVFF 251
                
Sbjct: 162 PAADM 166

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* Length = 361

 Score = 83.7 bits (208), Expect = 7e-19
 Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 34/183 (18%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLS-RGNIGAVKVLQELFPEPGRLQFIYA 129
            +L+TGGAG+IGS     ++K++   V  +D L+  GN+ +   L ++     R  F +A
Sbjct: 2   KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLES---LSDISESN-RYNFEHA 57

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARH 186
           D+ D+  + + F +   DAVMH AA ++V  S   P  +   I +N   T  +LE  AR 
Sbjct: 58  DICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAF---IETNIVGTYALLEV-ARK 113

Query: 187 GVDTLIYS----------STCATYG----------EPEKMPITEETPQAPINPYGKAKKM 226
               L             ST   YG                 TE T  AP +PY  A K 
Sbjct: 114 YWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPY-SASKA 172

Query: 227 AED 229
           + D
Sbjct: 173 SSD 175

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 82.3 bits (204), Expect = 2e-18
 Identities = 49/210 (23%), Positives = 72/210 (34%), Gaps = 56/210 (26%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           V VTG +G+IGS   +RLL+  Y V   V + +      VK L +L      L    ADL
Sbjct: 8   VCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVK--KVKHLLDLPKAETHLTLWKADL 65

Query: 132 GDAKAVNKFFSENAFDA-------VMHFAAVAYVGESTLDPLKYYHNITSN--------- 175
            D         E +FD        V H A           P                   
Sbjct: 66  AD---------EGSFDEAIKGCTGVFHVAT----------P--MDFESKDPENEVIKPTI 104

Query: 176 --TLVVLESMARHG-VDTLIYSSTCAT--YGEPEKMPITE---------ETPQAPINPYG 221
              L +++S A    V  L+++S+  T    E +     E            +     Y 
Sbjct: 105 EGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYF 164

Query: 222 KAKKMAEDIILDFSKNS--DMAVMILRLVV 249
            +K +AE     ++K +  D   +I  LVV
Sbjct: 165 VSKTLAEQAAWKYAKENNIDFITIIPTLVV 194

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 80.3 bits (199), Expect = 9e-18
 Identities = 46/211 (21%), Positives = 79/211 (37%), Gaps = 57/211 (27%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRV--TIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           V VTGG G++GS     LL++ Y V  TI  +  R     V  L  L     +L F  AD
Sbjct: 4   VCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRD--VSFLTNLPGASEKLHFFNAD 61

Query: 131 LGDAKAVNKFFSENAFDA-------VMHFAAVAYVGESTLDPLKYYHNITSN-------- 175
           L +          ++F A       + H A+          P      ++          
Sbjct: 62  LSN---------PDSFAAAIEGCVGIFHTAS----------P--IDFAVSEPEEIVTKRT 100

Query: 176 ---TLVVLESMARHG-VDTLIYSSTCAT--YGEPEKMPITEE---------TPQAPINPY 220
               L +L++      V   IY+S+ +   +   +K  + E          + +     Y
Sbjct: 101 VDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNY 160

Query: 221 GKAKKMAEDIILDFSKNS--DMAVMILRLVV 249
             +K +AE  +L+F + +  D+  +IL  +V
Sbjct: 161 AVSKTLAEKAVLEFGEQNGIDVVTLILPFIV 191

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 79.2 bits (196), Expect = 3e-17
 Identities = 48/221 (21%), Positives = 78/221 (35%), Gaps = 59/221 (26%)

Query: 64  SQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPEPG 122
           +QH  G     V GG G++ S     LL+  Y V T V +        V  L EL  E G
Sbjct: 3   TQHPIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQK--KVSHLLEL-QELG 59

Query: 123 RLQFIYADLGDAKAVNKFFSENAFDA-------VMHFAAVAYVGESTLDPLKYYHNITSN 175
            L+   ADL D         E +F+A       V H A           P   +      
Sbjct: 60  DLKIFRADLTD---------ELSFEAPIAGCDFVFHVAT----------P--VHFASEDP 98

Query: 176 -----------TLVVLESMAR-HGVDTLIYSSTCAT----YGEPEKMPITEE-------- 211
                       + V+++  R   V  +I +S+ A       +   + + E+        
Sbjct: 99  ENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFL 158

Query: 212 -TPQAPINPYGKAKKMAEDIILDFSKNS--DMAVMILRLVV 249
            + + P   Y  +K +AE     F++ +  D+  +I  L+ 
Sbjct: 159 TSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMA 199

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321

 Score = 73.4 bits (181), Expect = 2e-15
 Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 18/156 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            L+TG AG++G + A  L + +  V      SR N   +            ++ I  D+ 
Sbjct: 15  ALITGVAGFVGKYLANHLTEQNVEVF---GTSRNNEAKLP----------NVEMISLDIM 61

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN-TLVVLESMARHGVDTL 191
           D++ V K  S+   D + H AA + V +S L+      +     TL VL+++    +D  
Sbjct: 62  DSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKK-GTFSTNVFGTLHVLDAVRDSNLDCR 120

Query: 192 IY-SSTCATYG--EPEKMPITEETPQAPINPYGKAK 224
           I    +   YG   PE+ P++EE    P++PYG +K
Sbjct: 121 ILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSK 156

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 69.0 bits (169), Expect = 6e-14
 Identities = 32/176 (18%), Positives = 62/176 (35%), Gaps = 26/176 (14%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +L+ G  G +G   A RL    + VT    L R          +  P    +Q + AD+
Sbjct: 5   KILIAG-CGDLGLELARRLTAQGHEVTG---LRRS--------AQPMPA--GVQTLIADV 50

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
                +         + +++  A +   +        Y     N    L ++    +  +
Sbjct: 51  TRPDTLASI-VHLRPEILVYCVAASEYSDE--HYRLSYVEGLRN---TLSALEGAPLQHV 104

Query: 192 IYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRL 247
            + S+   YG+  +  + E+TP    +  GK    AE ++      +  +  ILR 
Sbjct: 105 FFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEALL------AAYSSTILRF 154

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 67.8 bits (165), Expect = 3e-13
 Identities = 38/192 (19%), Positives = 56/192 (29%), Gaps = 26/192 (13%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTI--VDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
            L+ G  G IG+  A  L           V  ++R    A         E   + ++  D
Sbjct: 4   ALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------HEDNPINYVQCD 56

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNI--TSNTLVVLESMARH-- 186
           + D        S      V H   V +   ST        N     N L  +     +  
Sbjct: 57  ISDPDDSQAKLS--PLTDVTHVFYVTWANRSTEQEN-CEANSKMFRNVLDAVIPNCPNLK 113

Query: 187 ----GVDTLIYSSTCATYG--EPEKMPITEETPQAPINPYGKAKKMAEDIIL-DFSKNSD 239
                     Y     +YG  E    P TE+ P+     Y       EDI+L +  K   
Sbjct: 114 HISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRL---KYMNFYYDLEDIMLEEVEKKEG 170

Query: 240 MAVMILRLVVFF 251
           +   + R    F
Sbjct: 171 LTWSVHRPGNIF 182

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 67.2 bits (164), Expect = 4e-13
 Identities = 39/170 (22%), Positives = 62/170 (36%), Gaps = 7/170 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V VTG  G+ G   +L L      V             V  L E       +Q    D+ 
Sbjct: 12  VFVTGHTGFKGGWLSLWLQTMGATVKGYSL----TAPTVPSLFETARVADGMQSEIGDIR 67

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR-HGVDTL 191
           D   + +   E   + V H AA   V  S  +P++ Y      T+ +LE++    GV  +
Sbjct: 68  DQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAV 127

Query: 192 IYSSTCATYGEPE-KMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
           +  ++   Y   E      E       +PY  +K  AE ++    +NS  
Sbjct: 128 VNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAE-LVTSSYRNSFF 176

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 62.7 bits (153), Expect = 4e-12
 Identities = 29/183 (15%), Positives = 57/183 (31%), Gaps = 37/183 (20%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           + + G  G  G     + ++  Y VT +V + SR        L    P       +  D+
Sbjct: 6   IAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR--------LPSEGPR--PAHVVVGDV 55

Query: 132 GDAKAVNKFFSENAF---DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
             A  V     +      DAV+          + L P         N   ++ +M  HGV
Sbjct: 56  LQAADV-----DKTVAGQDAVIV----LLGTRNDLSPTTVMSEGARN---IVAAMKAHGV 103

Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLV 248
           D ++  ++     +P K+P         +            ++    + S +  + +   
Sbjct: 104 DKVVACTSAFLLWDPTKVP-------PRLQAVTDDHIRMHKVL----RESGLKYVAVMPP 152

Query: 249 VFF 251
              
Sbjct: 153 HIG 155

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 61.5 bits (150), Expect = 3e-11
 Identities = 43/234 (18%), Positives = 73/234 (31%), Gaps = 80/234 (34%)

Query: 71  THVLVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPEPGRLQFIY- 128
           + VLVTG  G++ SH   +LL+  Y+V     + S+        LQ+ +      +F   
Sbjct: 12  SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKL-----ANLQKRWDAKYPGRFETA 66

Query: 129 --ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-----NITSN------ 175
              D+           + A+D V      A V           H     + ++       
Sbjct: 67  VVEDMLK---------QGAYDEV--IKGAAGV----------AHIASVVSFSNKYDEVVT 105

Query: 176 -----TLVVLESMARHG-VDTLIYSSTCAT----YGEPEKMPITEET------------- 212
                TL  L + A    V   + +S+  +        E + + E++             
Sbjct: 106 PAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLP 165

Query: 213 ---PQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT 263
              PQ  +  Y  +K  AE     F   +            FTL A    + P 
Sbjct: 166 ESDPQKSLWVYAASKTEAELAAWKFMDENK---------PHFTLNA----VLPN 206

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score = 61.2 bits (149), Expect = 7e-11
 Identities = 41/222 (18%), Positives = 79/222 (35%), Gaps = 21/222 (9%)

Query: 33  FAGKFILAAALTALCIFLLKQSPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLK 92
                 +  +        L Q    +S    +      T VL+ G  G+IG+H   RLL+
Sbjct: 281 AGDGITMQGS-QLAQTLGLVQGSRLNSQPACTARRR--TRVLILGVNGFIGNHLTERLLR 337

Query: 93  D-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH 151
           +  Y V  +D  S         +      P    F+  D+       ++  +   D V+ 
Sbjct: 338 EDHYEVYGLDIGS-------DAISRFLNHP-HFHFVEGDISIHSEWIEYHVKKC-DVVLP 388

Query: 152 FAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE 211
             A+A   E T +PL+ +       L ++    ++    +I+ ST   YG        E+
Sbjct: 389 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDED 447

Query: 212 TPQAPINP-------YGKAKKMAEDIILDFSKNSDMAVMILR 246
                + P       Y  +K++ + +I  + +   +   + R
Sbjct: 448 HSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFR 489

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 57.7 bits (140), Expect = 3e-10
 Identities = 23/179 (12%), Positives = 56/179 (31%), Gaps = 27/179 (15%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           + + G  G +G      L    Y++      +R  +  V     +      + +   ++ 
Sbjct: 3   IFIVGSTGRVGKSLLKSLSTTDYQIYA---GAR-KVEQVPQYNNVKAVHFDVDWTPEEMA 58

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
                         DA+++ +         +D            + ++++  +  V   I
Sbjct: 59  KQLH--------GMDAIINVSGSGGKSLLKVD--------LYGAVKLMQAAEKAEVKRFI 102

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFF 251
             ST  +  +PEK           +  Y  AK  A+  +    K +++   I++     
Sbjct: 103 LLSTIFS-LQPEKWI---GAGFDALKDYYIAKHFADLYLT---KETNLDYTIIQPGALT 154

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 57.7 bits (139), Expect = 3e-10
 Identities = 23/182 (12%), Positives = 50/182 (27%), Gaps = 26/182 (14%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
            + + G  G  GS          + VT IV N  +           +      +  +  D
Sbjct: 2   KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGK-----------ITQTHKDINILQKD 50

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + D          +  + V+   A     +     +    ++       +  +       
Sbjct: 51  IFDLTLS----DLSDQNVVVD--AYGISPDEAEKHVTSLDHL-------ISVLNGTVSPR 97

Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPY-GKAKKMAEDIILDFSKNSDMAVMILRLVV 249
           L+     A+    E      E+      PY   A+  A+ +    S  ++ +   +    
Sbjct: 98  LLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSA 157

Query: 250 FF 251
            F
Sbjct: 158 MF 159

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 335

 Score = 57.2 bits (139), Expect = 8e-10
 Identities = 46/162 (28%), Positives = 70/162 (43%), Gaps = 18/162 (11%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRV------TIVDNLSRGNIGAVKVLQELFPEPGRLQFI 127
           LVTG  G  G++ A  LL+  YRV         D   R        L+EL  E   +Q+ 
Sbjct: 18  LVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWR--------LRELGIEG-DIQYE 68

Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARH 186
             D+ DA +V +   +     V + AA ++VG S   P+     +       +LE++ + 
Sbjct: 69  DGDMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPV-TTGVVDGLGVTHLLEAIRQF 127

Query: 187 GVDTLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMA 227
             +T  Y +ST   +G  +     E TP  P +PYG AK   
Sbjct: 128 SPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYG 169

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 56.6 bits (137), Expect = 9e-10
 Identities = 33/182 (18%), Positives = 58/182 (31%), Gaps = 34/182 (18%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLV G  G +  +    L    +       + R N      L+E     G    + A+L 
Sbjct: 24  VLVVGANGKVARYLLSELKNKGHEPVA---MVR-NEEQGPELRER----GASDIVVANLE 75

Query: 133 D--AKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           +  + A        + DAV+ FAA +         +             ++   + G+  
Sbjct: 76  EDFSHAF------ASIDAVV-FAAGSGPHTGADKTILIDLWGAIK---TIQEAEKRGIKR 125

Query: 191 LIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVV 249
            I  SS               +     +  Y  AK++A+D +    K S +   I+R   
Sbjct: 126 FIMVSSVGTV---------DPDQGPMNMRHYLVAKRLADDEL----KRSSLDYTIVRPGP 172

Query: 250 FF 251
             
Sbjct: 173 LS 174

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 56.9 bits (137), Expect = 1e-09
 Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 44/230 (19%)

Query: 53  QSPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVT-------------- 98
            + T ++          +  VL+TG  G++G +  L LL+                    
Sbjct: 56  DADTLATAVNLPGPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDA 115

Query: 99  ---IVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK-----AVNKFFSENAFDAVM 150
              +      G+   ++  +EL  +  RL+ +  D  +        + +  +E   D ++
Sbjct: 116 RRRLEKTFDSGDPELLRHFKELAAD--RLEVVAGDKSEPDLGLDQPMWRRLAETV-DLIV 172

Query: 151 HFAA-VAYVGESTL-DPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPI 208
             AA V       L  P     N+   T  ++       +    Y ST       E    
Sbjct: 173 DSAAMVNAFPYHELFGP-----NVAG-TAELIRIALTTKLKPFTYVSTADVGAAIEPSAF 226

Query: 209 TEETPQAPINP-----------YGKAKKMAEDIILDFSKNSDMAVMILRL 247
           TE+     I+P           YG +K   E ++ + +    + V + R 
Sbjct: 227 TEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRC 276

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 55.8 bits (134), Expect = 2e-09
 Identities = 17/182 (9%), Positives = 46/182 (25%), Gaps = 23/182 (12%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
            + V G  G  GS       +  + V  +V +  +              +          
Sbjct: 2   KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA------------ADRLGATVATLV 49

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
                         + DAV+   +V +        L +  ++       +  +       
Sbjct: 50  KEPLVLTEADLD--SVDAVVDALSVPWGSGRGYLHLDFATHL-------VSLLRNSDTLA 100

Query: 191 LIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSKNSDMAVMILRLVV 249
           +    + +        P+  + P++    P+                N+++  + +    
Sbjct: 101 VFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSE 160

Query: 250 FF 251
            F
Sbjct: 161 AF 162

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 55.6 bits (134), Expect = 2e-09
 Identities = 36/183 (19%), Positives = 58/183 (31%), Gaps = 34/183 (18%)

Query: 71  THVLVTGGAGYIGSHAALRLL-KDSYRVT-IVDNLSRGNIGAVKVLQELFPEPGRLQFIY 128
            +VL+ G  G I  H   +L  K + + T      ++        + + +P     Q I 
Sbjct: 24  KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAK--------IHKPYPT--NSQIIM 73

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+ +  A+     + A          A +    LD              V+ +M    V
Sbjct: 74  GDVLNHAAL-----KQAMQGQ--DIVYANLTGEDLDIQ---------ANSVIAAMKACDV 117

Query: 189 DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLV 248
             LI+  +   Y E        E   A I    K  + A D I    + S +   ILR  
Sbjct: 118 KRLIFVLSLGIYDEV--PGKFVEWNNAVIGEPLKPFRRAADAI----EASGLEYTILRPA 171

Query: 249 VFF 251
              
Sbjct: 172 WLT 174

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* Length = 345

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 18/162 (11%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRV------TIVDNLSRGNIGAVKVLQELFPEPGRLQFI 127
           L+TG  G  G++ A  LL+  Y V      +      R        L+EL  E   ++ I
Sbjct: 7   LITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWR--------LKELGIEN-DVKII 57

Query: 128 YADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLESMARH 186
           + DL +   + +   +   D V + AA ++VG S   P+     + +   L +LE++   
Sbjct: 58  HMDLLEFSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPI-LTAEVDAIGVLRILEALRTV 116

Query: 187 GVDTLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMA 227
             DT  Y +ST   +G+ +++P TE+TP  P +PY  AK   
Sbjct: 117 KPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFG 158

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 51.9 bits (124), Expect = 3e-08
 Identities = 26/181 (14%), Positives = 61/181 (33%), Gaps = 30/181 (16%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           ++ + G AG I       LL  +   +T+     R        +     +  R+  I   
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITL---YGR---QLKTRIPPEIIDHERVTVIEGS 60

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
             +   + +  +    + V  F      G                   ++++++R  +  
Sbjct: 61  FQNPGXLEQAVT--NAEVV--FVGAMESGSDMAS--------------IVKALSRXNIRR 102

Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVF 250
           +I  S     GE   + + + T       Y + ++ A +++    + S++   ILRL   
Sbjct: 103 VIGVSMAGLSGE-FPVALEKWTFDNLPISYVQGERQARNVL----RESNLNYTILRLTWL 157

Query: 251 F 251
           +
Sbjct: 158 Y 158

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 Length = 372

 Score = 49.2 bits (118), Expect = 4e-07
 Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 23/168 (13%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRV------TIVDNLSRGNIGAVKVLQELFPEP----GR 123
           L+TG  G  GS+ A  LL+  Y V          N  R        +  ++ +P     +
Sbjct: 5   LITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTER--------VDHIYQDPHTCNPK 56

Query: 124 LQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLES 182
               Y DL D   + +   E   D V +  A+++V  S   P +Y  ++ +  TL +LE+
Sbjct: 57  FHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESP-EYTADVDAMGTLRLLEA 115

Query: 183 MARHGVD--TLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMA 227
           +   G++  T  Y +ST   YG  +++P  E TP  P +PY  AK  A
Sbjct: 116 IRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYA 163

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 375

 Score = 48.4 bits (116), Expect = 9e-07
 Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 24/169 (14%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRV------TIVDNLSRGNIGAVKVLQELFPEP-----G 122
           L+TG  G  GS+ A  LL+  Y V      +   N  R        ++ L+  P     G
Sbjct: 28  LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGR--------IEHLYKNPQAHIEG 79

Query: 123 RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLE 181
            ++  Y DL D+  + K  +E     + +  A ++V  S     +Y  ++    TL +L+
Sbjct: 80  NMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLD 138

Query: 182 SMARHGV--DTLIY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMA 227
           ++   G+      Y +ST   YG+ +++P  E TP  P +PYG AK  A
Sbjct: 139 AVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYA 187

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 47.5 bits (113), Expect = 1e-06
 Identities = 33/192 (17%), Positives = 57/192 (29%), Gaps = 33/192 (17%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTG +G  G     +L + S +            G V+  Q      G       D+ 
Sbjct: 7   VLVTGASGRTGQIVYKKLKEGSDKFVAK--------GLVRSAQGKEKIGGEADVFIGDIT 58

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN-------------TLVV 179
           DA ++N  F     DA++   +     +   DP K                         
Sbjct: 59  DADSINPAF--QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQ 116

Query: 180 LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSD 239
           +++    GV  ++   +    G     P+ +             K+ AE  +     +S 
Sbjct: 117 IDAAKVAGVKHIVVVGSMG--GTNPDHPLNKLGNG----NILVWKRKAEQYL----ADSG 166

Query: 240 MAVMILRLVVFF 251
               I+R     
Sbjct: 167 TPYTIIRAGGLL 178

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 28/164 (17%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            L+TG +G +G     RLL + + V  V N S    G      +L            DL 
Sbjct: 3   TLITGASGQLG-IELSRLLSERHEVIKVYNSSEIQGG-----YKL------------DLT 44

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NITSNTLVVLESMARHGVDTL 191
           D   +  F  +   D +++ AA+  V +  ++  K Y  N  +    ++ +        +
Sbjct: 45  DFPRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEA-VRHIVRAGKVIDS-YI 102

Query: 192 IYSSTCATY---GEPEKMPITEETPQAPINPYGKAKKMAEDIIL 232
           ++ ST   Y   GE  K    EE    PIN YG +K + E   L
Sbjct: 103 VHIST--DYVFDGE--KGNYKEEDIPNPINYYGLSKLLGETFAL 142

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 45.3 bits (108), Expect = 8e-06
 Identities = 39/171 (22%), Positives = 71/171 (41%), Gaps = 27/171 (15%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGG G  G    +R + D+     +   SR  +   + +   F +P R++F   D+ 
Sbjct: 24  ILITGGTGSFG-KCFVRKVLDTTNAKKIIVYSRDELKQSE-MAMEFNDP-RMRFFIGDVR 80

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYH-NI--TSNTLVVLESMARHGVD 189
           D + +N        D  +H AA+ +V  +  +PL+    NI   SN   V+ +  ++ + 
Sbjct: 81  DLERLNYALEG--VDICIHAAALKHVPIAEYNPLECIKTNIMGASN---VINACLKNAIS 135

Query: 190 TLIYSST-CATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSD 239
            +I  ST  A                 PIN YG  K  ++ + +  +    
Sbjct: 136 QVIALSTDKAAN---------------PINLYGATKLCSDKLFVSANNFKG 171

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Length = 315

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 43/183 (23%), Positives = 68/183 (37%), Gaps = 41/183 (22%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTG  G +G  A  +  + +    +     R      +V                +L 
Sbjct: 5   VLVTGATGLLG-RAVHKEFQQNNWHAVGCGFRRARPKFEQV----------------NLL 47

Query: 133 DAKAVNKFFSENAFDAVMHFAA-----VAYVGESTLDPLKYYH-NITSNTLVVLESMARH 186
           D+ AV+    +     ++H AA     V    E+   P      N+ + +  + +  A  
Sbjct: 48  DSNAVHHIIHDFQPHVIVHCAAERRPDVV---EN--QPDAASQLNVDA-SGNLAKEAAAV 101

Query: 187 GVDTLIYSSTCATY---GEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVM 243
           G   LIY S+   Y   G     P  EE   AP+N YGK K   E  +L+ +  +     
Sbjct: 102 GA-FLIYISS--DYVFDG--TNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGA----A 152

Query: 244 ILR 246
           +LR
Sbjct: 153 VLR 155

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 20/145 (13%), Positives = 39/145 (26%), Gaps = 30/145 (20%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LV GG+G +G+         S+    +D                   P           
Sbjct: 25  ILVLGGSGALGAEVVKFFKSKSWNTISID---------------FRENPNADHSFTIKDS 69

Query: 133 DAKAVNKFFSENA-----FDAVMHFAAVAYVGESTLD-PLKYYH-----NITSNTLV--- 178
             + +     +        D  +  A     G ++ D  LK        N+ S       
Sbjct: 70  GEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHI 129

Query: 179 VLESMARHGVDTLIYSSTCATYGEP 203
             + + + G+  L   ++ A     
Sbjct: 130 GAKLLNQGGLFVLT-GASAALNRTS 153

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* Length = 321

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 47/173 (27%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V + G  G +GS A  R L+    V +V          ++   EL            +L 
Sbjct: 6   VFIAGHRGMVGS-AIRRQLEQRGDVELV----------LRTRDEL------------NLL 42

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVG----ESTLDPLKY-YHN--ITSNTLVVLESMAR 185
           D++AV+ FF+    D V  + A A VG     +T  P  + Y N  I SN   ++ +  +
Sbjct: 43  DSRAVHDFFASERIDQV--YLAAAKVGGIVANNTY-PADFIYQNMMIESN---IIHAAHQ 96

Query: 186 HGVDTLIY-SSTCATYGEPEKMPITEET----PQAPIN-PYGKAK----KMAE 228
           + V+ L++  S+C  Y +  K P+ E         P N PY  AK    K+ E
Sbjct: 97  NDVNKLLFLGSSCI-YPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCE 148

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 Length = 292

 Score = 42.5 bits (101), Expect = 5e-05
 Identities = 45/179 (25%), Positives = 69/179 (38%), Gaps = 39/179 (21%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TG  G +G     +L   +  V   D            +Q+L            D+ 
Sbjct: 15  ILITGANGQLGREIQKQLKGKNVEVIPTD------------VQDL------------DIT 50

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYV--GESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           +  AVNKFF+E   + V++ AA   V   E   D L Y  N       +  +    G   
Sbjct: 51  NVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYD-LAYKINAIG-PKNLAAAAYSVGA-E 107

Query: 191 LIYSSTCATY---GEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           ++  ST   Y   GE ++ PITE     P + YGK K   E+ +   +        I+R
Sbjct: 108 IVQIST--DYVFDGEAKE-PITEFDEVNPQSAYGKTKLEGENFVKALNPKY----YIVR 159

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* Length = 381

 Score = 43.1 bits (102), Expect = 5e-05
 Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 27/171 (15%)

Query: 74  LVTGGAGYIGSHAALRLLKDSYRV------TIVDNLSRGNIGAVKVLQELFPEP-----G 122
           L+TG  G  GS+    LL   Y V      +   N  R        +  ++ +P      
Sbjct: 32  LITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQR--------INHIYIDPHNVNKA 83

Query: 123 RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITS-NTLVVLE 181
            ++  YADL DA ++ ++      D V + AA ++V  S   P  Y  ++ +   L +LE
Sbjct: 84  LMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPD-YTADVVATGALRLLE 142

Query: 182 SMARHGVDTL----IY-SSTCATYGEPEKMPITEETPQAPINPYGKAKKMA 227
           ++  H +D+      Y + +   +G     P +E TP  P +PY  +K  A
Sbjct: 143 AVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAA 192

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 42.6 bits (100), Expect = 5e-05
 Identities = 31/175 (17%), Positives = 55/175 (31%), Gaps = 32/175 (18%)

Query: 78  GAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAV 137
           G GY     +  L    +R+      SR N   ++ ++    EP         L     +
Sbjct: 12  GHGYTARVLSRALAPQGWRIIG---TSR-NPDQMEAIRASGAEPLLWPGEEPSLDGVTHL 67

Query: 138 NKFFSENAFDAVMHFAAVAYVGESTLDP-LKYYHNITSNTLVVLESMARHGVDTLIYSST 196
                      ++  A  +       DP L    +  +                + Y ST
Sbjct: 68  -----------LISTAPDSGG-----DPVLAALGDQIAARA--------AQFRWVGYLST 103

Query: 197 CATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFF 251
            A YG+ +   + E TP  P    G+ + MAE          ++ + + RL   +
Sbjct: 104 TAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAV---PNLPLHVFRLAGIY 155

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 42.5 bits (101), Expect = 5e-05
 Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            +VTGGA  IG   + +L  D + + + D L +    A + ++ +     +  F+  D+ 
Sbjct: 5   AMVTGGAQGIGRGISEKLAADGFDIAVAD-LPQQEEQAAETIKLIEAADQKAVFVGLDVT 63

Query: 133 DAKAVNKFFSE 143
           D    +    E
Sbjct: 64  DKANFDSAIDE 74

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 42.5 bits (101), Expect = 6e-05
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYAD 130
           H L+T G   +G     +LL   Y VT+       +  A++ ++E + +   RLQF+ AD
Sbjct: 9   HALITAGTKGLGKQVTEKLLAKGYSVTVTY---HSDTTAMETMKETYKDVEERLQFVQAD 65

Query: 131 LGDAKAVNKFFSE 143
           +   + ++K   E
Sbjct: 66  VTKKEDLHKIVEE 78

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287

 Score = 42.1 bits (100), Expect = 9e-05
 Identities = 40/179 (22%), Positives = 59/179 (32%), Gaps = 39/179 (21%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V++TG  G +G      L  + Y +   D             + L            D+ 
Sbjct: 8   VIITGANGQLGKQLQEELNPEEYDIYPFD------------KKLL------------DIT 43

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYV--GESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           +   V +   E     ++H AA   V   E   D L Y  N       V  +    G   
Sbjct: 44  NISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERD-LAYVINAIG-ARNVAVASQLVGA-K 100

Query: 191 LIYSSTCATY---GEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           L+Y ST   Y   G+  +    E    APIN YG +K   E  + +          I+R
Sbjct: 101 LVYIST--DYVFQGDRPE-GYDEFHNPAPINIYGASKYAGEQFVKELHNKY----FIVR 152

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
             VTGG G IG+    RL KD +RV      +      VK L++             ++G
Sbjct: 16  AYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSP--RRVKWLEDQKALGFDFYASEGNVG 73

Query: 133 DAKAVNKFFSE 143
           D  +  + F +
Sbjct: 74  DWDSTKQAFDK 84

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A Length = 450

 Score = 41.8 bits (97), Expect = 1e-04
 Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 10/80 (12%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            VL+  G+G++       L     +VT+           ++  ++L         I  D+
Sbjct: 5   SVLM-LGSGFVTRPTLDVLTDSGIKVTVACR-------TLESAKKLSAGVQHSTPISLDV 56

Query: 132 GDAKAVNKFFSENAFDAVMH 151
            D  A++   ++   D V+ 
Sbjct: 57  NDDAALDAEVAK--HDLVIS 74

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 41.4 bits (98), Expect = 2e-04
 Identities = 19/71 (26%), Positives = 26/71 (36%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            +VTGG   IG   A  L    + + I         G   V+ EL     R+ F+ ADL 
Sbjct: 32  AIVTGGRRGIGLGIARALAASGFDIAITGIGDAE--GVAPVIAELSGLGARVIFLRADLA 89

Query: 133 DAKAVNKFFSE 143
           D  +       
Sbjct: 90  DLSSHQATVDA 100

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 19/72 (26%), Positives = 25/72 (34%), Gaps = 3/72 (4%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
             LVTG    IG   A RL K+  RV +     RG  G    L+EL            D+
Sbjct: 24  VALVTGATSGIGLEIARRLGKEGLRVFVCA---RGEEGLRTTLKELREAGVEADGRTCDV 80

Query: 132 GDAKAVNKFFSE 143
                +    + 
Sbjct: 81  RSVPEIEALVAA 92

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 5/78 (6%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTGG   IG   A  L+     V IV        GAV+ L+ L    G +++   D+ 
Sbjct: 14  YLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDIT 73

Query: 133 DAKAVNKFFSENAFDAVM 150
           +           A DAV 
Sbjct: 74  NEDET-----ARAVDAVT 86

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 12/72 (16%), Positives = 18/72 (25%), Gaps = 3/72 (4%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
              VTG +  IG   A  L      V       R        +  L      +     D+
Sbjct: 26  TAFVTGVSSGIGLAVARTLAARGIAVYGCA---RDAKNVSAAVDGLRAAGHDVDGSSCDV 82

Query: 132 GDAKAVNKFFSE 143
                V+   + 
Sbjct: 83  TSTDEVHAAVAA 94

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 41.2 bits (96), Expect = 2e-04
 Identities = 30/176 (17%), Positives = 54/176 (30%), Gaps = 31/176 (17%)

Query: 56  TFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQ 115
               PSP  +       VL+ G  G+IG   A   L       I+      +    K+ +
Sbjct: 3   VSPVPSPKGR-------VLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFK 55

Query: 116 ELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN 175
            L  E      +Y  + + +A+ K   E+  D V+          ST+        I   
Sbjct: 56  AL--EDKGAIIVYGLINEQEAMEKILKEHEIDIVV----------STVGGESILDQIA-- 101

Query: 176 TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDII 231
              ++++M   G       S            +    P  P     + K+    ++
Sbjct: 102 ---LVKAMKAVGTIKRFLPSEF-------GHDVNRADPVEPGLNMYREKRRVRQLV 147

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 14/71 (19%), Positives = 33/71 (46%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +++ GG   +G+  A     +S  + +  + ++ +  A K+  EL  +  ++    +DL 
Sbjct: 14  IVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLS 73

Query: 133 DAKAVNKFFSE 143
           + + V K F  
Sbjct: 74  NEEEVAKLFDF 84

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 11/73 (15%), Positives = 21/73 (28%), Gaps = 3/73 (4%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYAD 130
             ++TG    IG   A  L K    + +    +        V  E+       +    AD
Sbjct: 27  TAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPD--EIRTVTDEVAGLSSGTVLHHPAD 84

Query: 131 LGDAKAVNKFFSE 143
           +     +    + 
Sbjct: 85  MTKPSEIADMMAM 97

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 40.2 bits (95), Expect = 3e-04
 Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
             VTGG G +G+  + RL      V +  + S  N      L          +    D+ 
Sbjct: 28  AFVTGGMGGLGAAISRRLHDAGMAVAV--SHSERNDHVSTWLMHERDAGRDFKAYAVDVA 85

Query: 133 DAKAVNKFFSE 143
           D ++  +   +
Sbjct: 86  DFESCERCAEK 96

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 21/79 (26%), Positives = 28/79 (35%), Gaps = 9/79 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
            LVTGG   +G   A  L  + Y V I     R          E+    G  ++ +  D+
Sbjct: 36  ALVTGGGTGVGRGIAQALSAEGYSVVITG---RRPDVLDAAAGEIGGRTGNIVRAVVCDV 92

Query: 132 GDAKAVNKFFSENAFDAVM 150
           GD   V        F AV 
Sbjct: 93  GDPDQV-----AALFAAVR 106

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 40.2 bits (95), Expect = 3e-04
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+TG +  IG   A    +   +V +    +       + +  +  + G   F  ADL 
Sbjct: 10  VLITGSSQGIGLATARLFARAGAKVGLHGRKAPA--NIDETIASMRADGGDAAFFAADLA 67

Query: 133 DAKAVNKFFSE 143
            ++A  +   E
Sbjct: 68  TSEACQQLVDE 78

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 39.8 bits (94), Expect = 4e-04
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +  IG   AL+L ++ Y V +    S+    A  V++E+  +      I A++ 
Sbjct: 7   ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKE--KAEAVVEEIKAKGVDSFAIQANVA 64

Query: 133 DAKAVNKFFSE 143
           DA  V     E
Sbjct: 65  DADEVKAMIKE 75

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG A  IG   A  LL    +V +VD      +     L E F EP +  FI  D+ 
Sbjct: 10  ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF-EPQKTLFIQCDVA 68

Query: 133 DAKAVNKFFSE 143
           D + +   F +
Sbjct: 69  DQQQLRDTFRK 79

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 39.4 bits (93), Expect = 5e-04
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +  IG   A+ L K    V +    +     A +V+ E+         + AD+ 
Sbjct: 7   ALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQ--KANEVVDEIKKLGSDAIAVRADVA 64

Query: 133 DAKAVNKFFSE 143
           +A+ V     +
Sbjct: 65  NAEDVTNMVKQ 75

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 39.9 bits (93), Expect = 5e-04
 Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 7/79 (8%)

Query: 71  THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           + +L+ GG GYIG+H     LK  +   +    +R N     +L E   +      +  +
Sbjct: 12  SKILIFGGTGYIGNHMVKGSLKLGHPTYV---FTRPNSSKTTLLDEF--QSLGAIIVKGE 66

Query: 131 LGDAKAVNKFFSENAFDAV 149
           L + + + +   +   D V
Sbjct: 67  LDEHEKLVELMKK--VDVV 83

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +  IG   AL L     +V +    S G   A +V+  +    G    + AD+ 
Sbjct: 31  ALVTGASRGIGRAIALELAAAGAKVAVNYASSAG--AADEVVAAIAAAGGEAFAVKADVS 88

Query: 133 DAKAVNKFFSE 143
               V   F+ 
Sbjct: 89  QESEVEALFAA 99

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 14/78 (17%), Positives = 26/78 (33%), Gaps = 13/78 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +VTG +  +G+     L ++   V  +D     G     +   EL      ++F  AD+
Sbjct: 10  FIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGE----EPAAEL---GAAVRFRNADV 62

Query: 132 GDAKAVNKFFSENAFDAV 149
            +           A    
Sbjct: 63  TNEADA-----TAALAFA 75

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 39.4 bits (93), Expect = 5e-04
 Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V+VTG +  IG   AL L K   +V +  N +R    A +V +++    G+      D+ 
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLV--NYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 133 DAKAVNKFFSE 143
               V      
Sbjct: 62  KEADVEAMMKT 72

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 39.5 bits (93), Expect = 6e-04
 Identities = 12/71 (16%), Positives = 29/71 (40%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V++TG +  IG   A+   ++   VTI    S       +++ +      ++  + AD+ 
Sbjct: 9   VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT 68

Query: 133 DAKAVNKFFSE 143
                ++  + 
Sbjct: 69  TEDGQDQIINS 79

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 39.4 bits (93), Expect = 6e-04
 Identities = 9/71 (12%), Positives = 22/71 (30%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            +VTG +  +G   A +L      + +  + +          +E       +     D+ 
Sbjct: 8   AIVTGSSRGLGKAIAWKLGNMGANIVLNGSPAST--SLDATAEEFKAAGINVVVAKGDVK 65

Query: 133 DAKAVNKFFSE 143
           + + V      
Sbjct: 66  NPEDVENMVKT 76

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 39.2 bits (92), Expect = 6e-04
 Identities = 26/144 (18%), Positives = 46/144 (31%), Gaps = 24/144 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLV GG G +GS         ++ V  +D +            E       ++   +   
Sbjct: 10  VLVYGGRGALGSRCVQAFRARNWWVASIDVVE----------NEEASASVIVKMTDSFTE 59

Query: 133 DAKAVNKFFSENA----FDAVMHFAAVAYVGESTLD-PLKYYH-----NITSNTLV---V 179
            A  V     +       DA++  A     G +      K        +I ++T+     
Sbjct: 60  QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLA 119

Query: 180 LESMARHGVDTLIYSSTCATYGEP 203
            + +   G+ TL   +  A  G P
Sbjct: 120 TKHLKEGGLLTLA-GAKAALDGTP 142

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 39.2 bits (92), Expect = 7e-04
 Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 13/81 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            +V+GGAG +G     RL  D   V I D    +G      +  EL     R +F+  ++
Sbjct: 33  AIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGK----ALADEL---GNRAEFVSTNV 85

Query: 132 GDAKAVNKFFSENAFDAVMHF 152
               +V       A +A    
Sbjct: 86  TSEDSV-----LAAIEAANQL 101

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 39.0 bits (92), Expect = 8e-04
 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG    IG   ALRL+KD + V I D  +     A  V  E+    G    +  D+ 
Sbjct: 5   ALVTGAGQGIGKAIALRLVKDGFAVAIAD-YNDA--TAKAVASEINQAGGHAVAVKVDVS 61

Query: 133 DAKAVNKFFSE 143
           D   V     +
Sbjct: 62  DRDQVFAAVEQ 72

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 38.8 bits (91), Expect = 8e-04
 Identities = 16/73 (21%), Positives = 24/73 (32%), Gaps = 3/73 (4%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYAD 130
             +VTG    IG   A  L      + +            KV   L  + G ++ +  AD
Sbjct: 6   VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAA--EIEKVRAGLAAQHGVKVLYDGAD 63

Query: 131 LGDAKAVNKFFSE 143
           L   +AV      
Sbjct: 64  LSKGEAVRGLVDN 76

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	267
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.98
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.97
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.97
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.97
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.97
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.97
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.97
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.97
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.97
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.97
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.97
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.97
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.97
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.97
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.97
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.97
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.97
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.97
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.97
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.97
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.97
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.97
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.97
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.97
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.97
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.97
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.97
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.97
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.97
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.97
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.97
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.97
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.97
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.97
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.97
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.96
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.96
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.96
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.96
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.96
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.96
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.96
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.96
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.96
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.96
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.96
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.96
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.96
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.96
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.96
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.96
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.96
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.96
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.96
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.96
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.96
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.96
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.96
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.96
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.96
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.96
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.96
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.96
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.96
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.96
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.96
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.96
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.96
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.96
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.96
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.96
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.96
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.96
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.96
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.96
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.96
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.96
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.96
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.96
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.96
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.96
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.96
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.96
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.96
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.96
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.96
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.96
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.96
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.96
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.96
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.96
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.96
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.96
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.96
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.96
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.96
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.96
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.96
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.96
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.96
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.96
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.96
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.96
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.96
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.96
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.96
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.96
1spx_A	278	Short-chain reductase family member (5L265); paral	99.96
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.96
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.96
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.96
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.96
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.96
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.96
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.96
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.96
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.96
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.96
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.96
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.96
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.96
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.96
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.96
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.96
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.96
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.96
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.96
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.96
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.96
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.96
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.96
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.96
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.95
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.95
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.95
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.95
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.95
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.95
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.95
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.95
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.95
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.95
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.95
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.95
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.95
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.95
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.95
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.95
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.95
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.95
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.95
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.95
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.95
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.95
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.95
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.95
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.95
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.95
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.95
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.95
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.95
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.95
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.95
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.95
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.95
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.95
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.95
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.95
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.95
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.95
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.95
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.95
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.95
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.95
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.95
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.95
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.95
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.95
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.95
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.95
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.95
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.95
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.95
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.95
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.95
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.95
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.95
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.95
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.95
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.95
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.95
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.95
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.95
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.95
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.95
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.95
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.95
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.95
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.95
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.95
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.95
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.95
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.95
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.95
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.95
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.95
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.95
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.95
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.95
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.95
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.95
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.95
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.95
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.95
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.95
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.95
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.95
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.95
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.94
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.94
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.94
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.94
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.94
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.94
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.94
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.94
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.94
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.94
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.94
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.94
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.94
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.94
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.94
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.94
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.94
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.94
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.94
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.94
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.94
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.94
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.94
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.94
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.94
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.94
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.94
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.94
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.94
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.94
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.94
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.94
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.94
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.93
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.93
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.93
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.93
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.93
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.93
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.93
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.93
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.93
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.93
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.93
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.93
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.92
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.92
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.92
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.92
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.92
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.92
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.92
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.92
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.92
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.92
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.91
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.91
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.91
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.91
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.9
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.9
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.9
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.9
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.9
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.9
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.9
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.89
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.89
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.89
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.88
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.88
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.88
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.88
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.88
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.88
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.87
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.87
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.86
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.85
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.84
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.84
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.84
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.83
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.83
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.82
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.81
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.81
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.8
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.79
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.76
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.75
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.73
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.62
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.2
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.18
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.04
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.97
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.9
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.84
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.83
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.8
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.78
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.75
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.71
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.63
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.55
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.47
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.47
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.46
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.39
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.3
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.29
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.27
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.2
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.2
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.18
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.18
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.18
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.16
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.13
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.11
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.09
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.07
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.04
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.03
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.01
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.01
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.97
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.96
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.96
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.93
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.92
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.91
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.91
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.9
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.9
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.89
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.86
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.82
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.82
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.8
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.77
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.76
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.75
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.74
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.71
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.7
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.69
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.69
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.68
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.64
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.64
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.63
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.6
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.58
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.57
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.57
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.57
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.55
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.53
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.49
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.49
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.49
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.49
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.48
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.46
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.45
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.44
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.44
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.42
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.4
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.4
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.38
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.34
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.34
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.31
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.31
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.3
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.3
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.27
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.27
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.26
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.24
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.23
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.22
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.22
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.18
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.16
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.13
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.13
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.11
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.1
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.09
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.07
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.07
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.07
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.05
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.03
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.03
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.01
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	97.01
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.97
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.97
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	96.96
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.96
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.93
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.92
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	96.88
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.87
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.86
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.85
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.82
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.82
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.82
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.82
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.8
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.8
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.8
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.79
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.78
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.77
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.76
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.76
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.74
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.72
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.72
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.68
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.67
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.67
1lnq_A	336	MTHK channels, potassium channel related protein;	96.66
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	96.65
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.63
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.62
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.61
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	96.61
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.61
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.6
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.58
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.56
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.55
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.55
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.54
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	96.53
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.43
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.41
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.4
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.39
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.39
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.38
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.38
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	96.37
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.37
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	96.31
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.31
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	96.29
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.27
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.27
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.25
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.25
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.25
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	96.24
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	96.22
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.21
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	96.2
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.17
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.14
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.13
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.12
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.05
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.04
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.03
4dim_A	403	Phosphoribosylglycinamide synthetase; structural g	95.98
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	95.96
2dwc_A	433	PH0318, 433AA long hypothetical phosphoribosylglyc	95.95
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	95.81
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	95.8
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.8

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.8e-32  Score=240.19  Aligned_cols=184  Identities=36%  Similarity=0.608  Sum_probs=160.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|+||||||+||||++++++|+++|++|++++|+.....+..+.+.+..  +..+.++.+|++|.++++++++..++|+|
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   82 (341)
T 3enk_A            5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT--GKTPAFHETDVSDERALARIFDAHPITAA   82 (341)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH--SCCCEEECCCTTCHHHHHHHHHHSCCCEE
T ss_pred             CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc--CCCceEEEeecCCHHHHHHHHhccCCcEE
Confidence            4799999999999999999999999999999987655544444433321  34688999999999999999987789999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (267)
                      |||||..........+++.++.|+.++.++++.|.+.+.++||++||.++||.....+++|+.+..+.+.|+.||.++|.
T Consensus        83 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  162 (341)
T 3enk_A           83 IHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQ  162 (341)
T ss_dssp             EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHH
T ss_pred             EECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHH
Confidence            99999865544556677889999999999999999998899999999999998888889999999999999999999999


Q ss_pred             HHHHhhhcCC-CcEEEEeccccccccceeecCCC
Q 024488          230 IILDFSKNSD-MAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       230 l~~~~a~e~g-~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      +++.++.+++ ++++++||+       ++|||++
T Consensus       163 ~~~~~~~~~~~~~~~~lRp~-------~v~G~~~  189 (341)
T 3enk_A          163 ILRDVEAADPSWRVATLRYF-------NPVGAHE  189 (341)
T ss_dssp             HHHHHHHHCTTCEEEEEEEC-------EEECCCT
T ss_pred             HHHHHhhcCCCceEEEEeec-------cccCCcc
Confidence            9999998875 999999999       8888865

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=3.3e-32  Score=228.90  Aligned_cols=171  Identities=17%  Similarity=0.134  Sum_probs=140.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||++|||+++|++|+++|++|++++|+   .+++.+..+++...+.++.++++|++|++++++++++     +
T Consensus         7 gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~---~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   83 (254)
T 4fn4_A            7 NKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELL---EDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS   83 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC---HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3999999999999999999999999999999964   3444455555544567899999999999999999876     8


Q ss_pred             CCCEEEEccccCCc-CCCccChHHHHH----HhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYV-GESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~-~~~~~~~~~~~~----~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||+... .+.++.+++.|+    .|+.+    ++.++|.|++++.++||++||.+.+-           +.+
T Consensus        84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~-----------~~~  152 (254)
T 4fn4_A           84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIR-----------GGF  152 (254)
T ss_dssp             CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------SSS
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcC-----------CCC
Confidence            99999999997643 344444444444    44444    67799999999999999999987762           455


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...+|++||+++.+|+++++.|   +|++++.|.||+|.|..
T Consensus       153 ~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~  194 (254)
T 4fn4_A          153 AGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNI  194 (254)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSC
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcc
Confidence            6789999999999999999998   68999999999998864

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.98  E-value=1.8e-31  Score=234.80  Aligned_cols=186  Identities=26%  Similarity=0.376  Sum_probs=160.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCC--CCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE--PGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      +|+||||||||+||++++++|+++|++|++++|.........+.+......  ..+++++.+|++|.+++.++++  ++|
T Consensus        25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d  102 (351)
T 3ruf_A           25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--GVD  102 (351)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--TCS
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc--CCC
Confidence            489999999999999999999999999999998665443333333222110  0478999999999999999998  899


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (267)
                      +|||+||.........++...++.|+.++.++++++.+.+.++||++||.++|+.....+++|+.+..+.+.|+.+|.++
T Consensus       103 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~  182 (351)
T 3ruf_A          103 HVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVN  182 (351)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred             EEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHH
Confidence            99999997654444566778889999999999999999998999999999999988888999999999999999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          228 EDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       228 e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      |.+++.++++.+++++++||+       ++|||+...
T Consensus       183 E~~~~~~~~~~g~~~~ilRp~-------~v~G~~~~~  212 (351)
T 3ruf_A          183 EIYAQVYARTYGFKTIGLRYF-------NVFGRRQDP  212 (351)
T ss_dssp             HHHHHHHHHHHCCCCEEEEEC-------SEESTTCCC
T ss_pred             HHHHHHHHHHhCCCEEEEeeC-------ceeCcCCCC
Confidence            999999999899999999999       999998654

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.97  E-value=1.3e-31  Score=225.37  Aligned_cols=172  Identities=16%  Similarity=0.126  Sum_probs=141.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||++|||+++|+.|+++|++|++++|+   .+.+.+..+++...+.++.++++|++|++++++++++     +
T Consensus         9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~---~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   85 (255)
T 4g81_D            9 GKTALVTGSARGLGFAYAEGLAAAGARVILNDIR---ATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI   85 (255)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSC---HHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence            4999999999999999999999999999999964   3445555555544567899999999999999998876     7


Q ss_pred             CCCEEEEccccCCcCCCccChHHHHHH----hHHH----HHHHHHHHHHc-CCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLKYYHN----ITSN----TLVVLESMARH-GVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~~~~~----~~~~----~~~~l~~~~~~-~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||+....+..+.+++.|+.    |+.+    ++.++|.|.++ +.++||++||.+.+.           +.+
T Consensus        86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~-----------~~~  154 (255)
T 4g81_D           86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA-----------ARP  154 (255)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-----------BCT
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcC-----------CCC
Confidence            899999999998776666655555544    4444    56688988765 568999999988763           455


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ...+|++||+++..|++.++.|   +|++++.|.||+|.|...
T Consensus       155 ~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~  197 (255)
T 4g81_D          155 TVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMN  197 (255)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGG
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchh
Confidence            6789999999999999999998   689999999999988643

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.97  E-value=1.4e-30  Score=221.29  Aligned_cols=168  Identities=20%  Similarity=0.271  Sum_probs=147.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      ||+||||||+||||++++++|+++|++|++++|+....+            +.+++++.+|++|.++++++++  ++|+|
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~--~~D~v   68 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA------------GPNEECVQCDLADANAVNAMVA--GCDGI   68 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC------------CTTEEEEECCTTCHHHHHHHHT--TCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc------------CCCCEEEEcCCCCHHHHHHHHc--CCCEE
Confidence            589999999999999999999999999999997543221            3478999999999999999998  89999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccC-CCCCCCCCCCCCCCCChHHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGE-PEKMPITEETPQAPINPYGKAKKMAE  228 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~-~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (267)
                      |||||..    .....+..++.|+.++.++++++.+.+.++||++||.++|+. ....+++|+.+..+.+.|+.||.+.|
T Consensus        69 i~~Ag~~----~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e  144 (267)
T 3rft_A           69 VHLGGIS----VEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGE  144 (267)
T ss_dssp             EECCSCC----SCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHH
T ss_pred             EECCCCc----CcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Confidence            9999984    344567889999999999999999998899999999999973 44567889999999999999999999


Q ss_pred             HHHHHhhhcCCCcEEEEeccccccccceeecCCC
Q 024488          229 DIILDFSKNSDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       229 ~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      .+++.+++++++++++|||+       ++||+..
T Consensus       145 ~~~~~~a~~~g~~~~~vr~~-------~v~~~~~  171 (267)
T 3rft_A          145 NLARMYFDKFGQETALVRIG-------SCTPEPN  171 (267)
T ss_dssp             HHHHHHHHHHCCCEEEEEEC-------BCSSSCC
T ss_pred             HHHHHHHHHhCCeEEEEEee-------cccCCCC
Confidence            99999999999999999999       6666543

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.97  E-value=3.2e-31  Score=221.29  Aligned_cols=172  Identities=15%  Similarity=0.172  Sum_probs=140.3

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (267)
                      +.+ |++|||||++|||+++|+.|+++|++|++++|+.  .++..+.++   ..+.++.++.+|++|+++++++++.+++
T Consensus         7 L~G-KvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~--~~~~~~~~~---~~g~~~~~~~~Dv~d~~~v~~~~~~g~i   80 (247)
T 4hp8_A            7 LEG-RKALVTGANTGLGQAIAVGLAAAGAEVVCAARRA--PDETLDIIA---KDGGNASALLIDFADPLAAKDSFTDAGF   80 (247)
T ss_dssp             CTT-CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC--CHHHHHHHH---HTTCCEEEEECCTTSTTTTTTSSTTTCC
T ss_pred             CCC-CEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCc--HHHHHHHHH---HhCCcEEEEEccCCCHHHHHHHHHhCCC
Confidence            344 9999999999999999999999999999999743  233333333   3467899999999999999999988999


Q ss_pred             CEEEEccccCCcCCCccChHHHHHH----hHHH----HHHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHN----ITSN----TLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~----~~~~----~~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      |+||||||+....+..+.+++.|+.    |+.+    ++.++|.|.+++ .++||++||.+.+-           +.+..
T Consensus        81 DiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~-----------g~~~~  149 (247)
T 4hp8_A           81 DILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQ-----------GGIRV  149 (247)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-----------CCSSC
T ss_pred             CEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCC-----------CCCCC
Confidence            9999999998766665555555544    4444    566888888775 68999999987762           45557


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      .+|++||+++..|+++++.|   +||+++.|.||+|.|...
T Consensus       150 ~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~  190 (247)
T 4hp8_A          150 PSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNT  190 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcch
Confidence            89999999999999999998   689999999999988553

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.97  E-value=1.4e-30  Score=228.77  Aligned_cols=187  Identities=26%  Similarity=0.409  Sum_probs=151.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCC
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENA  145 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (267)
                      ..+|+||||||||+||++++++|+++|  ++|++++|....  ...+.++... ...+++++.+|++|.+++.++++..+
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~--~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~   98 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYS--GNLNNVKSIQ-DHPNYYFVKGEIQNGELLEHVIKERD   98 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTT--CCGGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHHT
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccc--cchhhhhhhc-cCCCeEEEEcCCCCHHHHHHHHhhcC
Confidence            345899999999999999999999999  778877764321  1122222221 23579999999999999999998556


Q ss_pred             CCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCC-CCCCCCCCCCCCCCChHHHHH
Q 024488          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP-EKMPITEETPQAPINPYGKAK  224 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~-~~~~~~e~~~~~~~~~Y~~sK  224 (267)
                      +|+|||+||.........+++..++.|+.++.++++++.+.+.++||++||.++|+.. ...+++|+.+..+.+.|+.+|
T Consensus        99 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK  178 (346)
T 4egb_A           99 VQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSK  178 (346)
T ss_dssp             CCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHH
T ss_pred             CCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHH
Confidence            9999999998765555667788899999999999999999999999999999999876 456899999999999999999


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          225 KMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       225 ~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      .++|.+++.++++++++++++||+       ++|||+...
T Consensus       179 ~~~E~~~~~~~~~~g~~~~ilRp~-------~v~G~~~~~  211 (346)
T 4egb_A          179 ASADMIALAYYKTYQLPVIVTRCS-------NNYGPYQYP  211 (346)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEEC-------EEESTTCCT
T ss_pred             HHHHHHHHHHHHHhCCCEEEEeec-------ceeCcCCCc
Confidence            999999999999899999999999       999998654

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.97  E-value=1.6e-30  Score=226.82  Aligned_cols=177  Identities=40%  Similarity=0.619  Sum_probs=152.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      ||+||||||+|+||++++++|+++|++|++++|......      +.+   ..+++++.+|++|.++++++++..++|+|
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~d~v   71 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE------DAI---TEGAKFYNGDLRDKAFLRDVFTQENIEAV   71 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG------GGS---CTTSEEEECCTTCHHHHHHHHHHSCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch------hhc---CCCcEEEECCCCCHHHHHHHHhhcCCCEE
Confidence            589999999999999999999999999999997543321      111   12688899999999999999986679999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (267)
                      ||+||.........+++..++.|+.++.++++++.+.+.++||++||.++|+.....+++|+.+..+.+.|+.+|.++|.
T Consensus        72 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  151 (330)
T 2c20_A           72 MHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEK  151 (330)
T ss_dssp             EECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHH
T ss_pred             EECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHH
Confidence            99999754332345667888999999999999999988899999999999987777789999998889999999999999


Q ss_pred             HHHHhhhcCCCcEEEEeccccccccceeecCCC
Q 024488          230 IILDFSKNSDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       230 l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      +++.++++++++++++||+       ++|||+.
T Consensus       152 ~~~~~~~~~~~~~~ilrp~-------~v~G~~~  177 (330)
T 2c20_A          152 MLHWYSQASNLRYKIFRYF-------NVAGATP  177 (330)
T ss_dssp             HHHHHHHTSSCEEEEEECS-------EEECCCT
T ss_pred             HHHHHHHHhCCcEEEEecC-------cccCCCC
Confidence            9999999899999999999       8888864

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.97  E-value=1.2e-30  Score=226.64  Aligned_cols=176  Identities=24%  Similarity=0.296  Sum_probs=151.6

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      ++++||||||+||||++++++|+++|++|++++|+... +.       +     ++.++.+|++|.++++++++..++|+
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-------l-----~~~~~~~Dl~d~~~~~~~~~~~~~d~   77 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-------P-----NVEMISLDIMDSQRVKKVISDIKPDY   77 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-------T-----TEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-------c-----eeeEEECCCCCHHHHHHHHHhcCCCE
Confidence            45999999999999999999999999999999975432 11       1     57889999999999999998656999


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEEeccccccCC--CCCCCCCCCCCCCCChHHHHHH
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYGEP--EKMPITEETPQAPINPYGKAKK  225 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~iV~vSS~~~~g~~--~~~~~~e~~~~~~~~~Y~~sK~  225 (267)
                      |||+||........++++..++.|+.++.++++++.+. +.++||++||.++|+..  ...+++|+.+..+.+.|+.||+
T Consensus        78 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~  157 (321)
T 2pk3_A           78 IFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKA  157 (321)
T ss_dssp             EEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHH
T ss_pred             EEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHH
Confidence            99999976443334567888999999999999999775 57899999999999876  5678899999889999999999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          226 MAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       226 a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      ++|.+++.+++++|++++++||+       ++|||+...
T Consensus       158 ~~E~~~~~~~~~~gi~~~ilrp~-------~v~g~~~~~  189 (321)
T 2pk3_A          158 SVGMLARQYVKAYGMDIIHTRTF-------NHIGPGQSL  189 (321)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEEC-------EEECTTCCT
T ss_pred             HHHHHHHHHHHHcCCCEEEEEeC-------cccCcCCCC
Confidence            99999999998889999999999       999998654

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.97  E-value=2.1e-30  Score=224.62  Aligned_cols=175  Identities=32%  Similarity=0.540  Sum_probs=148.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      ||+||||||+||||++++++|+++|+ ++++++......   +.   .   ...+.++.+|++| +++.++++  ++|+|
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~-~v~~~~~~~~~~---~~---~---~~~~~~~~~Dl~~-~~~~~~~~--~~d~v   67 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESNE-IVVIDNLSSGNE---EF---V---NEAARLVKADLAA-DDIKDYLK--GAEEV   67 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTSC-EEEECCCSSCCG---GG---S---CTTEEEECCCTTT-SCCHHHHT--TCSEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEcCCCCCh---hh---c---CCCcEEEECcCCh-HHHHHHhc--CCCEE
Confidence            58999999999999999999999995 445553222111   11   1   2468899999999 99999998  89999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (267)
                      ||+|+........++++..++.|+.++.++++++.+.+.++||++||.++||.....+++|+.+..+.+.|+.+|.++|.
T Consensus        68 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  147 (313)
T 3ehe_A           68 WHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEA  147 (313)
T ss_dssp             EECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             EECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            99999765555667888999999999999999999998899999999999998888889999999999999999999999


Q ss_pred             HHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          230 IILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       230 l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      +++.++.+++++++++||+       ++|||+...
T Consensus       148 ~~~~~~~~~g~~~~ilRp~-------~v~G~~~~~  175 (313)
T 3ehe_A          148 LIESYCHTFDMQAWIYRFA-------NVIGRRSTH  175 (313)
T ss_dssp             HHHHHHHHTTCEEEEEECS-------CEESTTCCC
T ss_pred             HHHHHHHhcCCCEEEEeec-------cccCcCCCc
Confidence            9999999999999999999       999997653

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.97  E-value=2.1e-30  Score=224.39  Aligned_cols=174  Identities=32%  Similarity=0.486  Sum_probs=152.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||+||||++++++|+++|++|++++|.........         ...++++.+|++|.+ +.++++  + |+||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~~Dl~d~~-~~~~~~--~-d~vi   67 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV---------NPSAELHVRDLKDYS-WGAGIK--G-DVVF   67 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS---------CTTSEEECCCTTSTT-TTTTCC--C-SEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc---------CCCceEEECccccHH-HHhhcC--C-CEEE
Confidence            57999999999999999999999999999997654322111         346888999999998 877776  4 9999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (267)
                      |+||.........+++..++.|+.++.++++++.+.+.++||++||.++|+.....+++|+.+..+.+.|+.||.++|.+
T Consensus        68 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~  147 (312)
T 3ko8_A           68 HFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVM  147 (312)
T ss_dssp             ECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             ECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Confidence            99997655556677888899999999999999999998999999999999988888899999999999999999999999


Q ss_pred             HHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          231 ILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       231 ~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      ++.++++++++++++||+       ++|||+...
T Consensus       148 ~~~~~~~~g~~~~~lrp~-------~v~g~~~~~  174 (312)
T 3ko8_A          148 CATYARLFGVRCLAVRYA-------NVVGPRLRH  174 (312)
T ss_dssp             HHHHHHHHCCEEEEEEEC-------EEECTTCCS
T ss_pred             HHHHHHHhCCCEEEEeec-------cccCcCCCC
Confidence            999999899999999999       999997653

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.97  E-value=1.8e-30  Score=228.65  Aligned_cols=186  Identities=27%  Similarity=0.357  Sum_probs=154.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCC--CCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE--PGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      ||+||||||+||||++++++|+++|++|++++|+.....+..+.+.+....  ..++.++.+|++|.+++.++++  ++|
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d  104 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GVD  104 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TCS
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc--CCC
Confidence            489999999999999999999999999999998654322222211111110  2468899999999999999998  899


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (267)
                      +|||+||.........+++..++.|+.++.++++++.+.+.++||++||.++|+.....+++|+.+..+.+.|+.+|.++
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~  184 (352)
T 1sb8_A          105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVN  184 (352)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred             EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHH
Confidence            99999997543223356678889999999999999999888999999999999877777889999988999999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          228 EDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       228 e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      |.+++.++++.+++++++||+       ++|||+...
T Consensus       185 e~~~~~~~~~~g~~~~ilRp~-------~v~G~~~~~  214 (352)
T 1sb8_A          185 ELYADVFSRCYGFSTIGLRYF-------NVFGRRQDP  214 (352)
T ss_dssp             HHHHHHHHHHHCCCCEEEEEC-------CEECTTCCC
T ss_pred             HHHHHHHHHHcCCCEEEEEEC-------ceeCcCCCC
Confidence            999999998889999999999       999987643

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.97  E-value=4e-30  Score=225.07  Aligned_cols=182  Identities=35%  Similarity=0.625  Sum_probs=149.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||+||||++++++|+++|++|++++|..+......+.+++..  +.++.++.+|++|.++++++++..++|+||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vi   78 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDHAIDTVI   78 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc--CCcceEEEccCCCHHHHHHHhhccCCCEEE
Confidence            379999999999999999999999999999875443322222222221  235788999999999999998765799999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC-CChHHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP-INPYGKAKKMAED  229 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~-~~~Y~~sK~a~e~  229 (267)
                      ||||.........++++.++.|+.++.+++++|.+.+.++||++||.++|+.....+++|+.+..+ .+.|+.||+++|.
T Consensus        79 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~  158 (338)
T 1udb_A           79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQ  158 (338)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHH
T ss_pred             ECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHH
Confidence            999975433334456778899999999999999988889999999999998776677888877644 8899999999999


Q ss_pred             HHHHhhhcC-CCcEEEEeccccccccceeecCC
Q 024488          230 IILDFSKNS-DMAVMILRLVVFFTLVAFVIKIN  261 (267)
Q Consensus       230 l~~~~a~e~-g~~~~~vrp~~v~~~~~~~~Gp~  261 (267)
                      +++.++++. +++++++||+       ++|||+
T Consensus       159 ~~~~~~~~~~~~~~~ilR~~-------~v~G~~  184 (338)
T 1udb_A          159 ILTDLQKAQPDWSIALLRYF-------NPVGAH  184 (338)
T ss_dssp             HHHHHHHHSTTCEEEEEEEC-------EEECCC
T ss_pred             HHHHHHHhcCCCceEEEeec-------eecCCC
Confidence            999999876 8999999999       888874

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.97  E-value=5.4e-30  Score=216.26  Aligned_cols=174  Identities=14%  Similarity=0.119  Sum_probs=136.5

Q ss_pred             CCCCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-
Q 024488           65 QHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-  143 (267)
Q Consensus        65 ~~~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-  143 (267)
                      +.+.+ |++|||||++|||+++|++|+++|++|++++|+....+ .   ++++...+.++.++.+|++|++++++++++ 
T Consensus         3 ~~L~g-KvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~---~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~   77 (258)
T 4gkb_A            3 LNLQD-KVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-F---LDALAQRQPRATYLPVELQDDAQCRDAVAQT   77 (258)
T ss_dssp             CCCTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-H---HHHHHHHCTTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCC-CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-H---HHHHHhcCCCEEEEEeecCCHHHHHHHHHHH
Confidence            34455 99999999999999999999999999999997654322 2   222222356889999999999999988876 


Q ss_pred             ----CCCCEEEEccccCCcCCCccChHH---HHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCC
Q 024488          144 ----NAFDAVMHFAAVAYVGESTLDPLK---YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       144 ----~~~D~li~~Ag~~~~~~~~~~~~~---~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                          +++|+||||||+......+...++   .++.|+.+    ++.++|.|++.+ ++||++||.+.+.           
T Consensus        78 ~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~-----------  145 (258)
T 4gkb_A           78 IATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVT-----------  145 (258)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHH-----------
T ss_pred             HHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhcc-----------
Confidence                899999999998654443333322   23444444    566888887655 8999999988763           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      +.+...+|++||++++.|+++++.|   +||+++.|.||+|.|...
T Consensus       146 ~~~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~  191 (258)
T 4gkb_A          146 GQGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLY  191 (258)
T ss_dssp             CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhH
Confidence            4556789999999999999999998   689999999999988654

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.97  E-value=3.4e-30  Score=230.31  Aligned_cols=185  Identities=35%  Similarity=0.526  Sum_probs=152.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHH-hCCCeEEEEecCCCCC---------cchhhhhhhcCCC--CCc---eEEEEccCCCHH
Q 024488           71 THVLVTGGAGYIGSHAALRLL-KDSYRVTIVDNLSRGN---------IGAVKVLQELFPE--PGR---LQFIYADLGDAK  135 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~-~~G~~V~~~~r~~~~~---------~~~~~~~~~~~~~--~~~---~~~~~~Dl~d~~  135 (267)
                      |+||||||+||||++++++|+ ++|++|++++|.....         +.+.+.++++...  ..+   ++++.+|++|.+
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   82 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence            589999999999999999999 9999999999765432         1121112222211  124   889999999999


Q ss_pred             HHHHHhhcCC-CCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCC-------CCC
Q 024488          136 AVNKFFSENA-FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPE-------KMP  207 (267)
Q Consensus       136 ~v~~~~~~~~-~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~-------~~~  207 (267)
                      ++.++++..+ +|+||||||.........+++..++.|+.++.++++++.+.+.++||++||.++|+...       ..+
T Consensus        83 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~  162 (397)
T 1gy8_A           83 FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEP  162 (397)
T ss_dssp             HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCC
T ss_pred             HHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccccC
Confidence            9999987644 99999999976433234566788999999999999999998889999999999998665       568


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCC
Q 024488          208 ITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       208 ~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      ++|+.+..+.+.|+.||+++|.+++.++.+++++++++||+       ++|||+.
T Consensus       163 ~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~-------~v~G~~~  210 (397)
T 1gy8_A          163 IDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYF-------NACGAHE  210 (397)
T ss_dssp             BCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC-------EEECCCT
T ss_pred             cCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEecc-------ceeCCCc
Confidence            89998888899999999999999999998889999999999       8888865

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.97  E-value=4.2e-30  Score=225.73  Aligned_cols=183  Identities=37%  Similarity=0.639  Sum_probs=151.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC------CcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG------NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSEN  144 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~  144 (267)
                      |+||||||+||||++++++|+++|++|++++|..+.      ..+..+.+.+.  .+.+++++.+|++|.++++++++..
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL--TGRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH--HTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhc--cCCceEEEECCCCCHHHHHHHHHhc
Confidence            799999999999999999999999999999975443      22222222221  1346889999999999999998765


Q ss_pred             CCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC-CChHHHH
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP-INPYGKA  223 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~-~~~Y~~s  223 (267)
                      ++|+|||+||.........++++.++.|+.++.++++++.+.+.++||++||.++|+.....+++|+.+..+ .+.|+.+
T Consensus        81 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~s  160 (348)
T 1ek6_A           81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKS  160 (348)
T ss_dssp             CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHH
T ss_pred             CCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHH
Confidence            799999999975433334566788899999999999999998889999999999998777778899988777 8899999


Q ss_pred             HHHHHHHHHHhhhc-CCCcEEEEeccccccccceeecCCC
Q 024488          224 KKMAEDIILDFSKN-SDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       224 K~a~e~l~~~~a~e-~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      |+++|.+++.++++ .+++++++||+       ++|||++
T Consensus       161 K~~~e~~~~~~~~~~~~~~~~~lR~~-------~v~G~~~  193 (348)
T 1ek6_A          161 KFFIEEMIRDLCQADKTWNAVLLRYF-------NPTGAHA  193 (348)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEEEEEC-------EEECCCT
T ss_pred             HHHHHHHHHHHHhcCCCcceEEEeec-------cccCCCc
Confidence            99999999999887 34999999999       8888853

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.97  E-value=5e-30  Score=213.59  Aligned_cols=163  Identities=17%  Similarity=0.163  Sum_probs=130.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (267)
                      +|++|||||++|||+++|++|+++|++|++++|+....+   +      ....++..+.+|++|++++++++++ +++|+
T Consensus        11 GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~---~------~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDi   81 (242)
T 4b79_A           11 GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVH---A------PRHPRIRREELDITDSQRLQRLFEALPRLDV   81 (242)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTT---S------CCCTTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHh---h------hhcCCeEEEEecCCCHHHHHHHHHhcCCCCE
Confidence            499999999999999999999999999999997543221   1      1245788999999999999999988 78999


Q ss_pred             EEEccccCCcCCCccChHH----HHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChH
Q 024488          149 VMHFAAVAYVGESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~----~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (267)
                      ||||||+..+.  ++.+++    .++.|+.+    ++.++|.|++++ ++||++||.+..-           +.+....|
T Consensus        82 LVNNAGi~~~~--~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~-----------~~~~~~~Y  147 (242)
T 4b79_A           82 LVNNAGISRDR--EEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTF-----------GSADRPAY  147 (242)
T ss_dssp             EEECCCCCCGG--GGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTS-----------CCSSCHHH
T ss_pred             EEECCCCCCCc--ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccC-----------CCCCCHHH
Confidence            99999986432  222333    34455544    566888887654 8999999987762           45567899


Q ss_pred             HHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          221 GKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       221 ~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ++||+++..|+++++.|   +||+++.|.||+|.|...
T Consensus       148 ~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~  185 (242)
T 4b79_A          148 SASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLG  185 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC--
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhh
Confidence            99999999999999998   689999999999988653

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.97  E-value=6.2e-30  Score=224.27  Aligned_cols=184  Identities=26%  Similarity=0.400  Sum_probs=148.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      ||+||||||+||||++++++|+++|++|++++|..+...  .+..+.+.. .++++++.+|++|.++++++++..++|+|
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGA--TDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKYMPDSC   77 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTH--HHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCc--hhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhccCCCEE
Confidence            579999999999999999999999999999997543221  111122211 23688999999999999999985459999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEEeccccccCCCCC----------------CCCCCC
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSSTCATYGEPEKM----------------PITEET  212 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~vSS~~~~g~~~~~----------------~~~e~~  212 (267)
                      ||+||.........+++..++.|+.++.++++++.+.+.+ +||++||.++|+.....                +++|+.
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~  157 (347)
T 1orr_A           78 FHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDEST  157 (347)
T ss_dssp             EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTS
T ss_pred             EECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccC
Confidence            9999975432233466788899999999999999988764 99999999999864432                256777


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      +..+.+.|+.||+++|.+++.++.+++++++++||+       ++|||+..
T Consensus       158 ~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~-------~v~g~~~~  201 (347)
T 1orr_A          158 QLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHS-------SMYGGRQF  201 (347)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC-------CEECTTCC
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccC-------ceeCcCCC
Confidence            777889999999999999999998889999999999       88888754

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.97  E-value=1e-29  Score=222.15  Aligned_cols=185  Identities=24%  Similarity=0.214  Sum_probs=154.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +++||||||+||||++++++|+++|++|++++|......  .+.++.+ ....++.++.+|++|.+++.++++..++|+|
T Consensus        14 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V   90 (335)
T 1rpn_A           14 TRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLREL-GIEGDIQYEDGDMADACSVQRAVIKAQPQEV   90 (335)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHT-TCGGGEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccc--ccchhhc-cccCceEEEECCCCCHHHHHHHHHHcCCCEE
Confidence            489999999999999999999999999999998654321  1112222 1134688999999999999999885468999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (267)
                      ||+||.........+++..++.|+.++.++++++.+.+. ++||++||.++|+.....+++|+.+..+.+.|+.+|.++|
T Consensus        91 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e  170 (335)
T 1rpn_A           91 YNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGH  170 (335)
T ss_dssp             EECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             EECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHH
Confidence            999997543323456778899999999999999998885 8999999999999877778899999889999999999999


Q ss_pred             HHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          229 DIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       229 ~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      .+++.++++++++++++||+       ++|||+...
T Consensus       171 ~~~~~~~~~~~~~~~i~r~~-------~v~Gp~~~~  199 (335)
T 1rpn_A          171 WITVNYRESFGLHASSGILF-------NHESPLRGI  199 (335)
T ss_dssp             HHHHHHHHHHCCCEEEEEEC-------CEECTTSCT
T ss_pred             HHHHHHHHHcCCcEEEEeeC-------cccCCCCCC
Confidence            99999998889999999999       999997543

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.97  E-value=1.8e-29  Score=220.68  Aligned_cols=181  Identities=27%  Similarity=0.402  Sum_probs=150.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      |+||||||+||||++++++|+++|  ++|++++|..... . .+.++++. ...+++++.+|++|.+++++++.  ++|+
T Consensus         4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~-~-~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~d~   78 (336)
T 2hun_A            4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGS-N-PANLKDLE-DDPRYTFVKGDVADYELVKELVR--KVDG   78 (336)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTC-C-GGGGTTTT-TCTTEEEEECCTTCHHHHHHHHH--TCSE
T ss_pred             CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccC-c-hhHHhhhc-cCCceEEEEcCCCCHHHHHHHhh--CCCE
Confidence            679999999999999999999996  8999999754211 1 11122221 13478999999999999999986  8999


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (267)
                      |||+||.........++++.++.|+.++.++++++.+.+. ++||++||.++||.....+++|+.+..+.+.|+.||+++
T Consensus        79 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~  158 (336)
T 2hun_A           79 VVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAAS  158 (336)
T ss_dssp             EEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHH
T ss_pred             EEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHH
Confidence            9999997543223345677889999999999999988764 799999999999876667889998888999999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          228 EDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       228 e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      |.+++.++.+++++++++||+       ++|||+..
T Consensus       159 e~~~~~~~~~~~~~~~ilrp~-------~v~g~~~~  187 (336)
T 2hun_A          159 DMLVLGWTRTYNLNASITRCT-------NNYGPYQF  187 (336)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEC-------EEESTTCC
T ss_pred             HHHHHHHHHHhCCCEEEEeee-------eeeCcCCC
Confidence            999999999899999999999       99998864

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.97  E-value=1.8e-29  Score=211.37  Aligned_cols=164  Identities=16%  Similarity=0.183  Sum_probs=132.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+||||||++|||+++|++|+++|++|++++|+.   +.+.+..    ....++.++++|++|++++++++++     ++
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~---~~~~~~~----~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDE---KRSADFA----KERPNLFYFHGDVADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHH----TTCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHH----HhcCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999999642   2222222    2345788999999999999998876     89


Q ss_pred             CCEEEEccccCCcCCCccChHHHH----HHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTLDPLKYY----HNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~~~----~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|+||||||+....+..+.+.+.|    +.|+.+    ++.++|.|.+++ ++||++||.+.+.           +.+..
T Consensus        76 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~-----------~~~~~  143 (247)
T 3ged_A           76 IDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQ-----------SEPDS  143 (247)
T ss_dssp             CCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTS-----------CCTTC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeeccccc-----------CCCCC
Confidence            999999999876655554444444    445444    556788888765 8999999987762           45567


Q ss_pred             ChHHHHHHHHHHHHHHhhhc--CCCcEEEEeccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN--SDMAVMILRLVVFFTL  253 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e--~g~~~~~vrp~~v~~~  253 (267)
                      .+|++||+++..|+++++.|  .++++++|.||+|.|.
T Consensus       144 ~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~  181 (247)
T 3ged_A          144 EAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVT  181 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCC
Confidence            89999999999999999998  5799999999988764

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.97  E-value=1.7e-29  Score=223.78  Aligned_cols=188  Identities=24%  Similarity=0.244  Sum_probs=151.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCC--cchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN--IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      ||+||||||+||||++++++|+++|++|++++|+....  +.+.+..++....+.+++++.+|++|.+++.++++..++|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            58999999999999999999999999999999754321  1111111110001346888999999999999998854689


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC---CEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV---DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAK  224 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK  224 (267)
                      +||||||........++++..++.|+.++.++++++.+.+.   ++||++||.++|+.....+++|+.+..+.+.|+.||
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK  160 (372)
T 1db3_A           81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK  160 (372)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHH
Confidence            99999998655445567778889999999999999998876   899999999999877667889999888899999999


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          225 KMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       225 ~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      +++|.+++.++++++++++++||+       ++|||+...
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~r~~-------~~~gp~~~~  193 (372)
T 1db3_A          161 LYAYWITVNYRESYGMYACNGILF-------NHESPRRGE  193 (372)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEEC-------CEECTTSCT
T ss_pred             HHHHHHHHHHHHHhCCCeEEEEEC-------CccCCCCCC
Confidence            999999999999899999999999       999997543

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.97  E-value=2.1e-29  Score=218.22  Aligned_cols=169  Identities=21%  Similarity=0.339  Sum_probs=148.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|+||||||+|+||++++++|+++|++|++++|+. ...   + +       .+++++.+|++ .+++.++++  ++|+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~---~-~-------~~~~~~~~Dl~-~~~~~~~~~--~~d~V   66 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSI-GNK---A-I-------NDYEYRVSDYT-LEDLINQLN--DVDAV   66 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCC-C----------------CCEEEECCCC-HHHHHHHTT--TCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCC-Ccc---c-C-------CceEEEEcccc-HHHHHHhhc--CCCEE
Confidence            37999999999999999999999999999999862 111   1 1       16788999999 999999998  89999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (267)
                      ||+|+.....    ++++.++.|+.++.++++++.+.+.++||++||.++|+.....+++|+.+..|.+.|+.+|.++|.
T Consensus        67 ih~a~~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  142 (311)
T 3m2p_A           67 VHLAATRGSQ----GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEH  142 (311)
T ss_dssp             EECCCCCCSS----SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHH
T ss_pred             EEccccCCCC----ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHH
Confidence            9999976443    567788999999999999999999999999999999998777889999999999999999999999


Q ss_pred             HHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          230 IILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       230 l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      +++.++++.+++++++||+       ++|||+..+
T Consensus       143 ~~~~~~~~~g~~~~ilRp~-------~v~G~~~~~  170 (311)
T 3m2p_A          143 IGNIYSRKKGLCIKNLRFA-------HLYGFNEKN  170 (311)
T ss_dssp             HHHHHHHHSCCEEEEEEEC-------EEECSCC--
T ss_pred             HHHHHHHHcCCCEEEEeeC-------ceeCcCCCC
Confidence            9999999899999999999       999998753

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.97  E-value=6.4e-30  Score=221.43  Aligned_cols=177  Identities=34%  Similarity=0.465  Sum_probs=148.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||+||||++++++|+++|++|++++|.....   .+   .+   ..++.++.+|++|.++++++++..++|+||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~---~~---~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi   71 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGK---RE---NV---PKGVPFFRVDLRDKEGVERAFREFRPTHVS   71 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCC---GG---GS---CTTCCEECCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCc---hh---hc---ccCeEEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            3799999999999999999999999999998743221   11   11   135778899999999999998765789999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEecc-ccccC-CCCCCCCCCCCCCCCChHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTC-ATYGE-PEKMPITEETPQAPINPYGKAKKMAE  228 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~-~~~g~-~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (267)
                      |+|+.........+++..++.|+.++.++++++.+.+.++||++||. ++||. ....+++|+.+..+.+.|+.||+++|
T Consensus        72 ~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e  151 (311)
T 2p5y_A           72 HQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFE  151 (311)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHH
T ss_pred             ECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHH
Confidence            99997543223456677889999999999999998888899999998 88986 55567888888888999999999999


Q ss_pred             HHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          229 DIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       229 ~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      .+++.++++++++++++||+       ++|||+..
T Consensus       152 ~~~~~~~~~~~~~~~~lrp~-------~v~Gp~~~  179 (311)
T 2p5y_A          152 HYLSVYGQSYGLKWVSLRYG-------NVYGPRQD  179 (311)
T ss_dssp             HHHHHHHHHHCCCEEEEEEC-------EEECTTCC
T ss_pred             HHHHHHHHHcCCCEEEEeec-------cccCcCCC
Confidence            99999998889999999999       99998764

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.97  E-value=5.8e-30  Score=227.01  Aligned_cols=177  Identities=20%  Similarity=0.316  Sum_probs=151.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCC-CHHHHHHHhhcCC
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG-DAKAVNKFFSENA  145 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~v~~~~~~~~  145 (267)
                      ..||+||||||+|+||++++++|+++ |++|++++|+........+        ..+++++.+|++ |.+++.++++  +
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~--------~~~v~~~~~Dl~~d~~~~~~~~~--~   91 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK--------HERMHFFEGDITINKEWVEYHVK--K   91 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG--------STTEEEEECCTTTCHHHHHHHHH--H
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc--------CCCeEEEeCccCCCHHHHHHHhc--c
Confidence            34589999999999999999999998 9999999986543222111        247899999999 9999999998  7


Q ss_pred             CCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC-------CCCC
Q 024488          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-------APIN  218 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~-------~~~~  218 (267)
                      +|+|||+||.........++.+.++.|+.++.++++++.+.+ ++||++||.++||.....+++|+.+.       .+.+
T Consensus        92 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~  170 (372)
T 3slg_A           92 CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRW  170 (372)
T ss_dssp             CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTH
T ss_pred             CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCC
Confidence            999999999865544456777888999999999999999988 99999999999998777777777644       5667


Q ss_pred             hHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          219 PYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       219 ~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      .|+.+|.++|.+++.++++ +++++++||+       ++|||+..
T Consensus       171 ~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~-------~v~G~~~~  207 (372)
T 3slg_A          171 IYACSKQLMDRVIWGYGME-GLNFTLFRPF-------NWIGPGLD  207 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHTT-TCEEEEEEEC-------SEECSSCC
T ss_pred             cHHHHHHHHHHHHHHHHHC-CCCEEEEccc-------cccCCCcc
Confidence            9999999999999999988 9999999999       99999865

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.97  E-value=2.2e-29  Score=220.30  Aligned_cols=181  Identities=27%  Similarity=0.374  Sum_probs=151.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC---C---CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKD---S---YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSEN  144 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~---G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~  144 (267)
                      |+||||||+||||++++++|+++   |   ++|++++|......  .+.++++. ...+++++.+|++|.+++++++.  
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~--~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--   75 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN--RANLAPVD-ADPRLRFVHGDIRDAGLLARELR--   75 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC--GGGGGGGT-TCTTEEEEECCTTCHHHHHHHTT--
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCc--hhhhhhcc-cCCCeEEEEcCCCCHHHHHHHhc--
Confidence            47999999999999999999997   8   99999997542111  11122221 13578899999999999999986  


Q ss_pred             CCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHH
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAK  224 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK  224 (267)
                      ++|+|||+||.........++++.++.|+.++.++++++.+.+.++||++||.++||.....+++|+.+..+.+.|+.||
T Consensus        76 ~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK  155 (337)
T 1r6d_A           76 GVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASK  155 (337)
T ss_dssp             TCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHH
T ss_pred             CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHH
Confidence            89999999997543222345677889999999999999999888999999999999876667888998888999999999


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          225 KMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       225 ~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      .++|.+++.++++++++++++||+       ++|||+..
T Consensus       156 ~~~e~~~~~~~~~~g~~~~ilrp~-------~v~G~~~~  187 (337)
T 1r6d_A          156 AGSDLVARAYHRTYGLDVRITRCC-------NNYGPYQH  187 (337)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEEC-------EEECTTCC
T ss_pred             HHHHHHHHHHHHHHCCCEEEEEee-------eeECCCCC
Confidence            999999999998889999999999       99998764

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.97  E-value=4e-30  Score=218.30  Aligned_cols=172  Identities=16%  Similarity=0.134  Sum_probs=135.9

Q ss_pred             CCCCCCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhh
Q 024488           63 FSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS  142 (267)
Q Consensus        63 ~~~~~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~  142 (267)
                      |..++.+ |++|||||++|||+++|++|+++|++|++++|+   .+.+.+..+++   +.++..+++|++|+++++++++
T Consensus        23 Ms~rL~g-KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~---~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~   95 (273)
T 4fgs_A           23 MTQRLNA-KIAVITGATSGIGLAAAKRFVAEGARVFITGRR---KDVLDAAIAEI---GGGAVGIQADSANLAELDRLYE   95 (273)
T ss_dssp             --CTTTT-CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHH
T ss_pred             hcchhCC-CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHH
Confidence            3344555 999999999999999999999999999999963   44555555555   4578899999999999999887


Q ss_pred             c-----CCCCEEEEccccCCcCCCccChHHHHH----HhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCC
Q 024488          143 E-----NAFDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPIT  209 (267)
Q Consensus       143 ~-----~~~D~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~  209 (267)
                      +     +++|+||||||+....+..+.+++.|+    .|+.+    ++.++|.|++  .++||++||.+.+-        
T Consensus        96 ~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~~--------  165 (273)
T 4fgs_A           96 KVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGST--------  165 (273)
T ss_dssp             HHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGGS--------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhcc--------
Confidence            6     799999999998776666655555554    45444    3445565643  46899999987762        


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          210 EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       210 e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                         +.+...+|++||+++..|+++++.|   +||+++.|.||+|.|..
T Consensus       166 ---~~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~  210 (273)
T 4fgs_A          166 ---GTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTG  210 (273)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC--
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChh
Confidence               4556789999999999999999998   68999999999888753

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.97  E-value=1.3e-29  Score=222.70  Aligned_cols=165  Identities=26%  Similarity=0.410  Sum_probs=144.5

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      ..+|+||||||+||||++++++|+++|++|++++|....               .++.++.+|++|.+++.++++  ++|
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~---------------~~~~~~~~Dl~d~~~~~~~~~--~~d   79 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG---------------TGGEEVVGSLEDGQALSDAIM--GVS   79 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS---------------SCCSEEESCTTCHHHHHHHHT--TCS
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC---------------CCccEEecCcCCHHHHHHHHh--CCC
Confidence            345899999999999999999999999999999975432               357789999999999999998  899


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccC--CCCCCCCCCCCCCCCChHHHHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGE--PEKMPITEETPQAPINPYGKAKK  225 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~--~~~~~~~e~~~~~~~~~Y~~sK~  225 (267)
                      +|||+|+.....  ....+..++.|+.++.++++++.+.+.++||++||.++||.  ....+++|+.+..+.+.|+.+|.
T Consensus        80 ~vih~A~~~~~~--~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~  157 (347)
T 4id9_A           80 AVLHLGAFMSWA--PADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKL  157 (347)
T ss_dssp             EEEECCCCCCSS--GGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHH
T ss_pred             EEEECCcccCcc--hhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHH
Confidence            999999975432  22337788999999999999999999899999999999987  56678999999999999999999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEeccccccccceee
Q 024488          226 MAEDIILDFSKNSDMAVMILRLVVFFTLVAFVI  258 (267)
Q Consensus       226 a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~  258 (267)
                      ++|.+++.++++.+++++++||+       ++|
T Consensus       158 ~~E~~~~~~~~~~~~~~~ilRp~-------~v~  183 (347)
T 4id9_A          158 LGEELVRFHQRSGAMETVILRFS-------HTQ  183 (347)
T ss_dssp             HHHHHHHHHHHHSSSEEEEEEEC-------EEE
T ss_pred             HHHHHHHHHHHhcCCceEEEccc-------eEe
Confidence            99999999999999999999999       888

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.97  E-value=2.1e-29  Score=220.52  Aligned_cols=184  Identities=24%  Similarity=0.227  Sum_probs=154.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||+||||++++++|+++|++|++++|+......  +.+++.. ...+++++.+|++|.+++.++++..++|+||
T Consensus         4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   80 (345)
T 2z1m_A            4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELG-IENDVKIIHMDLLEFSNIIRTIEKVQPDEVY   80 (345)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhcc-ccCceeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            899999999999999999999999999999986543221  2222221 1346889999999999999998754689999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (267)
                      ||||........++.+..++.|+.++.++++++.+.+. ++||++||.++||.....+++|+.+..+.+.|+.||+++|.
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  160 (345)
T 2z1m_A           81 NLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHW  160 (345)
T ss_dssp             ECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHH
Confidence            99997643323456778899999999999999998775 89999999999998777788999888899999999999999


Q ss_pred             HHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          230 IILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       230 l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      +++.++.+++++++++|++       ++|||+...
T Consensus       161 ~~~~~~~~~~~~~~~~r~~-------~~~gpg~~~  188 (345)
T 2z1m_A          161 ITVNYREAYNMFACSGILF-------NHESPLRGI  188 (345)
T ss_dssp             HHHHHHHHHCCCEEEEEEC-------CEECTTSCT
T ss_pred             HHHHHHHHhCCceEeeeee-------eecCCCCCC
Confidence            9999999889999999999       999998543

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.97  E-value=2.1e-29  Score=222.24  Aligned_cols=183  Identities=21%  Similarity=0.212  Sum_probs=152.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|+||||||+||||++++++|+++|++|++++|+........+.+.    ...+++++.+|++|.+++.++++..++|+|
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   84 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR----VADGMQSEIGDIRDQNKLLESIREFQPEIV   84 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT----TTTTSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc----cCCceEEEEccccCHHHHHHHHHhcCCCEE
Confidence            3899999999999999999999999999999986544433322221    234788999999999999999985458999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEEeccccccCCCC-CCCCCCCCCCCCChHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEK-MPITEETPQAPINPYGKAKKMA  227 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~-~~~~e~~~~~~~~~Y~~sK~a~  227 (267)
                      ||+||.........+++..++.|+.++.++++++.+.+ .++||++||.++||.... .+++|+.+..+.+.|+.||.++
T Consensus        85 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~  164 (357)
T 1rkx_A           85 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCA  164 (357)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHH
T ss_pred             EECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHH
Confidence            99999643222345667888999999999999998876 789999999999986543 4678888888899999999999


Q ss_pred             HHHHHHhhhcC---------CCcEEEEeccccccccceeecCCCC
Q 024488          228 EDIILDFSKNS---------DMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       228 e~l~~~~a~e~---------g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      |.+++.++.++         +++++++||+       ++|||+..
T Consensus       165 e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~-------~v~G~~~~  202 (357)
T 1rkx_A          165 ELVTSSYRNSFFNPANYGQHGTAVATVRAG-------NVIGGGDW  202 (357)
T ss_dssp             HHHHHHHHHHHSCGGGHHHHCCEEEEEECC-------CEECTTCC
T ss_pred             HHHHHHHHHHHhhhhccccCCceEEEEeec-------eeeCCCCC
Confidence            99999998764         9999999999       99998764

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.97  E-value=5.6e-29  Score=220.07  Aligned_cols=178  Identities=23%  Similarity=0.339  Sum_probs=147.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHh--CCCeEEEEecCCCCCcch---h---hhhhhcCCCCCceEEEEccCCCHHHHHHHh
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLK--DSYRVTIVDNLSRGNIGA---V---KVLQELFPEPGRLQFIYADLGDAKAVNKFF  141 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~--~G~~V~~~~r~~~~~~~~---~---~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~  141 (267)
                      +|+||||||+||||++++++|++  +|++|++++|........   .   ......  .+.++.++.+|++|.++++++ 
T Consensus        10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~-   86 (362)
T 3sxp_A           10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNL--IGFKGEVIAADINNPLDLRRL-   86 (362)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGG--TTCCSEEEECCTTCHHHHHHH-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhc--cccCceEEECCCCCHHHHHHh-
Confidence            48999999999999999999999  999999999865411100   0   111111  134678999999999999998 


Q ss_pred             hcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHH
Q 024488          142 SENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYG  221 (267)
Q Consensus       142 ~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~  221 (267)
                      ...++|+|||+||....  ...+++..++.|+.++.++++++.+.+.+ ||++||.++||.... +++|+.+..|.+.|+
T Consensus        87 ~~~~~D~vih~A~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-~~~E~~~~~p~~~Y~  162 (362)
T 3sxp_A           87 EKLHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNVVGKNESPENVYG  162 (362)
T ss_dssp             TTSCCSEEEECCCCCGG--GCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-SBCTTSCCCCSSHHH
T ss_pred             hccCCCEEEECCccCCc--cccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-CCCCCCCCCCCChhH
Confidence            22389999999996533  45677889999999999999999888764 999999999987766 899999999999999


Q ss_pred             HHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          222 KAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       222 ~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      .||.++|.+++.++.+  ++++++||+       ++|||+..
T Consensus       163 ~sK~~~E~~~~~~~~~--~~~~~lR~~-------~v~Gp~~~  195 (362)
T 3sxp_A          163 FSKLCMDEFVLSHSND--NVQVGLRYF-------NVYGPREF  195 (362)
T ss_dssp             HHHHHHHHHHHHTTTT--SCEEEEEEC-------SEESTTCG
T ss_pred             HHHHHHHHHHHHHhcc--CCEEEEEeC-------ceeCcCCC
Confidence            9999999999999876  899999999       99999864

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.97  E-value=2.1e-29  Score=215.68  Aligned_cols=175  Identities=15%  Similarity=0.093  Sum_probs=137.7

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC---------CcchhhhhhhcCCCCCceEEEEccCCCHHHHHH
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---------NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK  139 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~---------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~  139 (267)
                      .+|++|||||+||||+++|++|+++|++|++++|+...         .+.+.+..+.+...+.++.++.+|++|.+++++
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            34999999999999999999999999999999985322         222333333333335689999999999999999


Q ss_pred             Hhhc-----CCCCEEEEccccCCcCCCccCh----HHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCC
Q 024488          140 FFSE-----NAFDAVMHFAAVAYVGESTLDP----LKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKM  206 (267)
Q Consensus       140 ~~~~-----~~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~  206 (267)
                      ++++     +++|+||||||+.......+..    +..++.|+.++    +.++|.|.+++.++||++||.+.+.     
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----  163 (281)
T 3s55_A           89 FVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS-----  163 (281)
T ss_dssp             HHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS-----
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcC-----
Confidence            8876     6899999999987654433333    34455677664    4466667778889999999988873     


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          207 PITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       207 ~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                            +.++...|++||++++.++++++.|   +|+++++|+||+|.|..
T Consensus       164 ------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  208 (281)
T 3s55_A          164 ------ANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPM  208 (281)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTT
T ss_pred             ------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcc
Confidence                  4556789999999999999999998   58999999999777654

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.97  E-value=1.4e-29  Score=216.81  Aligned_cols=176  Identities=21%  Similarity=0.212  Sum_probs=136.7

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      ..+ |++|||||+||||++++++|+++|++|++++|+....++..+.+++......++.++.+|++|++++++++++   
T Consensus         9 l~~-k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (281)
T 3svt_A            9 FQD-RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA   87 (281)
T ss_dssp             CTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCC-CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            344 9999999999999999999999999999999754433333333333322233789999999999999998876   


Q ss_pred             --CCCCEEEEccccC-CcCCCcc----ChHHHHHHhHHHHH----HHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVA-YVGESTL----DPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       144 --~~~D~li~~Ag~~-~~~~~~~----~~~~~~~~~~~~~~----~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                        +++|+||||||+. ...+..+    ..+..++.|+.++.    .+++.|.+++.++||++||.+.+.           
T Consensus        88 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------  156 (281)
T 3svt_A           88 WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASN-----------  156 (281)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS-----------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcC-----------
Confidence              6899999999973 2222222    33445667777754    466677777788999999988873           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +.++...|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       157 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~  201 (281)
T 3svt_A          157 THRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDL  201 (281)
T ss_dssp             CCTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcc
Confidence            4556889999999999999999988   46999999999887754

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.97  E-value=2.3e-29  Score=220.94  Aligned_cols=180  Identities=25%  Similarity=0.373  Sum_probs=149.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      ||+||||||+||||++++++|+++  |++|++++|.....  ..+.++++.  ..+++++.+|++|.+++.++++  ++|
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~--~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~--~~d   77 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAG--NKANLEAIL--GDRVELVVGDIADAELVDKLAA--KAD   77 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTC--CGGGTGGGC--SSSEEEEECCTTCHHHHHHHHT--TCS
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCC--ChhHHhhhc--cCCeEEEECCCCCHHHHHHHhh--cCC
Confidence            689999999999999999999999  89999999754211  112222221  2478899999999999999998  789


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCC------------CCCCCCCCCC
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEK------------MPITEETPQA  215 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~------------~~~~e~~~~~  215 (267)
                      +|||+||.........+++..++.|+.++.++++++.+.+. +||++||.++||....            .+++|+.+..
T Consensus        78 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~  156 (348)
T 1oc2_A           78 AIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYN  156 (348)
T ss_dssp             EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCC
T ss_pred             EEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCC
Confidence            99999997543223345677889999999999999998876 9999999999986432            5788888888


Q ss_pred             CCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          216 PINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      +.+.|+.||.++|.+++.++.+++++++++||+       ++|||+..
T Consensus       157 ~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~-------~v~G~~~~  197 (348)
T 1oc2_A          157 PSSPYSSTKAASDLIVKAWVRSFGVKATISNCS-------NNYGPYQH  197 (348)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC-------CEESTTCC
T ss_pred             CCCccHHHHHHHHHHHHHHHHHhCCCEEEEeec-------eeeCCCCC
Confidence            899999999999999999998889999999999       88998764

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.97  E-value=2.5e-29  Score=215.65  Aligned_cols=176  Identities=17%  Similarity=0.126  Sum_probs=138.5

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC-------------CCcchhhhhhhcCCCCCceEEEEccCCC
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR-------------GNIGAVKVLQELFPEPGRLQFIYADLGD  133 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~d  133 (267)
                      ..+ |++|||||++|||+++|++|+++|++|++++|+..             +.+.+.+..+++...+.++.++.+|++|
T Consensus         9 l~~-k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   87 (286)
T 3uve_A            9 VEG-KVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD   87 (286)
T ss_dssp             TTT-CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             cCC-CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence            344 99999999999999999999999999999997621             2333334344444446689999999999


Q ss_pred             HHHHHHHhhc-----CCCCEEEEccccCCcCC-Cc----cChHHHHHHhHHHH----HHHHHHHHHcC-CCEEEEEeccc
Q 024488          134 AKAVNKFFSE-----NAFDAVMHFAAVAYVGE-ST----LDPLKYYHNITSNT----LVVLESMARHG-VDTLIYSSTCA  198 (267)
Q Consensus       134 ~~~v~~~~~~-----~~~D~li~~Ag~~~~~~-~~----~~~~~~~~~~~~~~----~~~l~~~~~~~-~~~iV~vSS~~  198 (267)
                      .+++++++++     +++|+||||||+..... ..    +..+..++.|+.++    +.++|.|.+++ .++||++||.+
T Consensus        88 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~  167 (286)
T 3uve_A           88 YDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVG  167 (286)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchh
Confidence            9999998875     68999999999865433 22    23344566777664    44677777765 68999999988


Q ss_pred             cccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          199 TYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       199 ~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .+.           +.+....|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       168 ~~~-----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~  215 (286)
T 3uve_A          168 GLK-----------AYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPM  215 (286)
T ss_dssp             GTS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTT
T ss_pred             hcc-----------CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCc
Confidence            873           4556789999999999999999998   68999999999888754

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=3.4e-29  Score=222.40  Aligned_cols=187  Identities=24%  Similarity=0.219  Sum_probs=151.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCC--cchhhhhhhcCC-CCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN--IGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      |+||||||+||||++++++|+++|++|++++|.....  +.+.+..+.... ...+++++.+|++|.+++.++++..++|
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  104 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT  104 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence            7899999999999999999999999999999864321  111111111000 1346889999999999999998854689


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC---CEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV---DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAK  224 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK  224 (267)
                      +||||||........++++..++.|+.++.++++++.+.+.   ++||++||.++|+.....+++|+.+..+.+.|+.+|
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK  184 (375)
T 1t2a_A          105 EIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAK  184 (375)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred             EEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHH
Confidence            99999997543323456677889999999999999998876   899999999999877667889998888899999999


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          225 KMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       225 ~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      +++|.+++.++.+++++++++||+       ++|||+...
T Consensus       185 ~~~e~~~~~~~~~~~~~~~i~r~~-------~~~gp~~~~  217 (375)
T 1t2a_A          185 LYAYWIVVNFREAYNLFAVNGILF-------NHESPRRGA  217 (375)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEEC-------CEECTTSCT
T ss_pred             HHHHHHHHHHHHHhCCCEEEEecc-------cccCCCCCC
Confidence            999999999998889999999999       999987543

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.97  E-value=5.2e-29  Score=211.23  Aligned_cols=172  Identities=16%  Similarity=0.123  Sum_probs=135.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCC-CceEEEEccCCCHHHHHHHhhc----
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEP-GRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      .+|++|||||+||||++++++|+++|++|++++|+..   +..+..+++...+ .++.++.+|++|.+++++++++    
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTA---DIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE   85 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3499999999999999999999999999999996543   3333333333323 5789999999999999988875    


Q ss_pred             -CCCCEEEEccccCCcCCCccCh----HHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYVGESTLDP----LKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                       +++|+||||||+....+..+..    +..++.|+.++    +.+++.|.+++.++||++||.+...          .+.
T Consensus        86 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------~~~  155 (262)
T 3pk0_A           86 FGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI----------TGY  155 (262)
T ss_dssp             HSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT----------BCC
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc----------CCC
Confidence             6899999999987554433333    33456676664    4567777777889999999977531          134


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      ++...|++||++++.+++.++.|   +|+++++|+||+|.|.
T Consensus       156 ~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~  197 (262)
T 3pk0_A          156 PGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTE  197 (262)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCH
T ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCc
Confidence            56789999999999999999998   6899999999977764

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.96  E-value=2.5e-29  Score=211.19  Aligned_cols=172  Identities=17%  Similarity=0.120  Sum_probs=135.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|+++++.  +.+...+..+++...+.++.++++|++|.+++++++++     +
T Consensus         4 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            4 TKSALVTGASRGIGRSIALQLAEEGYNVAVNYAG--SKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             SCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC--CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999998863  22333333333333356789999999999999998876     6


Q ss_pred             CCCEEEEccccCCcCCCccC----hHHHHHHhHHHHH----HHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLD----PLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~~----~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+.......+.    .+..++.|+.++.    .++|.|.+++.++||++||.+.+.           +.++
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  150 (246)
T 3osu_A           82 SLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAV-----------GNPG  150 (246)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------CCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC-----------CCCC
Confidence            89999999998755443332    3345667777644    456666777888999999987763           4556


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++.+.+++.++.|   .|+++++|+||+|.|..
T Consensus       151 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  191 (246)
T 3osu_A          151 QANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDM  191 (246)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGC
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCc
Confidence            789999999999999999986   68999999999877754

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.96  E-value=3.4e-29  Score=211.17  Aligned_cols=172  Identities=13%  Similarity=0.122  Sum_probs=131.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~  145 (267)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.++   ..+.++.++.+|++|.++++++++.    ++
T Consensus         7 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~   83 (252)
T 3h7a_A            7 NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIE---AAGGRIVARSLDARNEDEVTAFLNAADAHAP   83 (252)
T ss_dssp             SCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHH---HTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH---hcCCeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence            3999999999999999999999999999999975544433333333   3356899999999999999988875    58


Q ss_pred             CCEEEEccccCCcCCCccC----hHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTLD----PLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~----~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|+||||||+....+..+.    .+..++.|+.+    ++.++|.|++++.++||++||.+.+.           +.+..
T Consensus        84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  152 (252)
T 3h7a_A           84 LEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLR-----------GGSGF  152 (252)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTC-----------CCTTC
T ss_pred             ceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcC-----------CCCCC
Confidence            9999999998765443333    33445666666    45577888888888999999988763           45567


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcE-EEEeccccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAV-MILRLVVFFTLVA  255 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~-~~vrp~~v~~~~~  255 (267)
                      ..|++||++++.+++.++.|   .|+++ ++++||+|.|...
T Consensus       153 ~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~  194 (252)
T 3h7a_A          153 AAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWV  194 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhh
Confidence            89999999999999999988   58999 8999998887543

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.96  E-value=4.5e-29  Score=213.20  Aligned_cols=174  Identities=16%  Similarity=0.113  Sum_probs=138.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC----------CCcchhhhhhhcCCCCCceEEEEccCCCHHHHHH
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR----------GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK  139 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~----------~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~  139 (267)
                      +|++|||||++|||+++|++|+++|++|++++|..+          +.+.+.+..+++...+.++.++.+|++|.+++++
T Consensus        11 ~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (277)
T 3tsc_A           11 GRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRK   90 (277)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            399999999999999999999999999999997422          3333444444443345689999999999999999


Q ss_pred             Hhhc-----CCCCEEEEccccCCcCCCcc----ChHHHHHHhHHHH----HHHHHHHHHcC-CCEEEEEeccccccCCCC
Q 024488          140 FFSE-----NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSNT----LVVLESMARHG-VDTLIYSSTCATYGEPEK  205 (267)
Q Consensus       140 ~~~~-----~~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~  205 (267)
                      ++++     +++|+||||||+.......+    ..+..++.|+.++    +.++|.|.+++ .++||++||.+.+.    
T Consensus        91 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~----  166 (277)
T 3tsc_A           91 VVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK----  166 (277)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC----
Confidence            8876     78999999999876544333    3344566676664    45677777765 68999999988873    


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          206 MPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       206 ~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                             +.+....|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       167 -------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~  211 (277)
T 3tsc_A          167 -------MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPM  211 (277)
T ss_dssp             -------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGG
T ss_pred             -------CCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCc
Confidence                   4556789999999999999999998   58999999999888865

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.96  E-value=3.4e-29  Score=212.62  Aligned_cols=172  Identities=16%  Similarity=0.114  Sum_probs=134.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||+++|++|+++|++|++++|+..   .+.+..+++...+.++.++.+|++|.++++++++.     +
T Consensus         4 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   80 (264)
T 3tfo_A            4 DKVILITGASGGIGEGIARELGVAGAKILLGARRQA---RIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWG   80 (264)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH---HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999996543   33333333333356789999999999999998875     6


Q ss_pred             CCCEEEEccccCCcCCCccCh----HHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+....+..+..    +..++.|+.++    +.++|.|++++.++||++||.+.+.           +.+.
T Consensus        81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~-----------~~~~  149 (264)
T 3tfo_A           81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALS-----------VVPT  149 (264)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------CCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcc-----------cCCC
Confidence            899999999987554433333    34456666664    4678888888889999999988773           4556


Q ss_pred             CChHHHHHHHHHHHHHHhhhcC-CCcEEEEeccccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKNS-DMAVMILRLVVFFTLVA  255 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e~-g~~~~~vrp~~v~~~~~  255 (267)
                      ...|++||++++.++++++.|. |+++++|+||+|.|.+.
T Consensus       150 ~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~  189 (264)
T 3tfo_A          150 AAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELA  189 (264)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC-----
T ss_pred             ChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCccc
Confidence            7899999999999999999985 89999999999988654

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.96  E-value=5.4e-29  Score=219.66  Aligned_cols=182  Identities=25%  Similarity=0.392  Sum_probs=149.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           72 HVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      +||||||+||||++++++|+++ |++|++++|..... . .+.++++. ...+++++.+|++|.+++.++++..++|+||
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~-~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   78 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAG-N-LESLSDIS-ESNRYNFEHADICDSAEITRIFEQYQPDAVM   78 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTC-C-GGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCC-c-hhhhhhhh-cCCCeEEEECCCCCHHHHHHHHhhcCCCEEE
Confidence            6999999999999999999998 79999999754211 1 11122221 1347899999999999999999766799999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHc--CCC-------EEEEEeccccccCCCC--C--------CCCCC
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH--GVD-------TLIYSSTCATYGEPEK--M--------PITEE  211 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~-------~iV~vSS~~~~g~~~~--~--------~~~e~  211 (267)
                      ||||.........+++..++.|+.++.++++++.+.  +.+       +||++||.++||....  .        +++|+
T Consensus        79 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~  158 (361)
T 1kew_A           79 HLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET  158 (361)
T ss_dssp             ECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT
T ss_pred             ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCC
Confidence            999975432233456778899999999999999887  655       9999999999986532  1        68888


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          212 TPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      .+..+.+.|+.||+++|.+++.++.+++++++++||+       ++|||+..
T Consensus       159 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~-------~v~G~~~~  203 (361)
T 1kew_A          159 TAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCS-------NNYGPYHF  203 (361)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC-------EEESTTCC
T ss_pred             CCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeec-------eeECCCCC
Confidence            8888899999999999999999998889999999999       99998764

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.96  E-value=6.5e-29  Score=212.50  Aligned_cols=174  Identities=14%  Similarity=0.076  Sum_probs=138.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC----------CCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHH
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS----------RGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK  139 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~----------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~  139 (267)
                      +|++|||||+||||+++|++|+++|++|++++|+.          ++.+++.+..+++...+.++.++.+|++|.+++++
T Consensus        15 gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   94 (280)
T 3pgx_A           15 GRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRE   94 (280)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence            49999999999999999999999999999999742          13333444444444446789999999999999999


Q ss_pred             Hhhc-----CCCCEEEEccccCCcCCCccCh----HHHHHHhHHHH----HHHHHHHHHcC-CCEEEEEeccccccCCCC
Q 024488          140 FFSE-----NAFDAVMHFAAVAYVGESTLDP----LKYYHNITSNT----LVVLESMARHG-VDTLIYSSTCATYGEPEK  205 (267)
Q Consensus       140 ~~~~-----~~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~----~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~  205 (267)
                      ++++     +++|+||||||+....+..+.+    +..++.|+.++    +.++|.|.+++ .++||++||.+.+.    
T Consensus        95 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----  170 (280)
T 3pgx_A           95 LVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK----  170 (280)
T ss_dssp             HHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS----
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhcc----
Confidence            8875     6899999999987655433333    34455676664    45677777765 68999999988773    


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          206 MPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       206 ~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                             +.+....|++||++++.+++.++.|   +|+++++|+||+|.|..
T Consensus       171 -------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  215 (280)
T 3pgx_A          171 -------ATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPM  215 (280)
T ss_dssp             -------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTT
T ss_pred             -------CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcc
Confidence                   4556789999999999999999998   68999999999777754

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.96  E-value=4.9e-29  Score=210.66  Aligned_cols=171  Identities=16%  Similarity=0.106  Sum_probs=136.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+...   ..+..+++...+.++.++.+|++|.+++++++++     +
T Consensus        12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   88 (256)
T 3gaf_A           12 DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEG---AEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFG   88 (256)
T ss_dssp             TCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHH---HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3999999999999999999999999999999975433   3333333333356899999999999999988875     6


Q ss_pred             CCCEEEEccccCCcCCCc---cChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST---LDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~---~~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      ++|+||||||+......+   ++.+..++.|+.++    +.++|.|++++.++||++||.+.+.           +.++.
T Consensus        89 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  157 (256)
T 3gaf_A           89 KITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGEN-----------TNVRM  157 (256)
T ss_dssp             CCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTC-----------CCTTC
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcC-----------CCCCc
Confidence            899999999987554432   23344556677664    4467777788888999999988873           55668


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..|++||++.+.+++.++.|   .|+++++|+||+|.|..
T Consensus       158 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~  197 (256)
T 3gaf_A          158 ASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDA  197 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCch
Confidence            89999999999999999988   58999999999888743

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.96  E-value=4.9e-29  Score=210.93  Aligned_cols=172  Identities=16%  Similarity=0.147  Sum_probs=136.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEE-ecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      +|++|||||+||||++++++|+++|++|+++ +|   +.+...+..+++...+.++.++.+|++|.++++++++.     
T Consensus         4 ~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r---~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (258)
T 3oid_A            4 NKCALVTGSSRGVGKAAAIRLAENGYNIVINYAR---SKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF   80 (258)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCC---CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3899999999999999999999999999997 54   33334444444444466899999999999999998876     


Q ss_pred             CCCCEEEEccccCCcCCCccChH----HHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTLDPL----KYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +++|+||||||+....+..+.+.    ..++.|+.++    +.++|.|++++.++||++||.+.+.           +.+
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~  149 (258)
T 3oid_A           81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIR-----------YLE  149 (258)
T ss_dssp             SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTS-----------BCT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCC-----------CCC
Confidence            68999999999865544333333    3456666664    4467777887888999999988773           456


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      +...|++||++++.+++.++.|   .|+++++|+||+|.|...
T Consensus       150 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~  192 (258)
T 3oid_A          150 NYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDAL  192 (258)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGG
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhh
Confidence            6889999999999999999998   489999999998887543

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.96  E-value=1.6e-28  Score=214.97  Aligned_cols=171  Identities=14%  Similarity=0.078  Sum_probs=139.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|+||||||+|+||++++++|+++|++|++++|+....+.    +..     .+++++.+|++|.+++.++++  ++|+|
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~~-----~~~~~~~~Dl~d~~~~~~~~~--~~d~v   81 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LAY-----LEPECRVAEMLDHAGLERALR--GLDGV   81 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GGG-----GCCEEEECCTTCHHHHHHHTT--TCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hcc-----CCeEEEEecCCCHHHHHHHHc--CCCEE
Confidence            3689999999999999999999999999999986543221    111     257889999999999999998  79999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCC--CCCCCCCCCCC----CChHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEK--MPITEETPQAP----INPYGKA  223 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~--~~~~e~~~~~~----~~~Y~~s  223 (267)
                      ||+||...  ....+.++.++.|+.++.++++++.+.+.++||++||.++|+....  .+ +|+.+..+    .+.|+.+
T Consensus        82 ih~a~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~~~~~~~Y~~s  158 (342)
T 2x4g_A           82 IFSAGYYP--SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEGLFYDSLPSGKSSYVLC  158 (342)
T ss_dssp             EEC--------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTTCCCSSCCTTSCHHHHH
T ss_pred             EECCccCc--CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCCCCCCccccccChHHHH
Confidence            99999653  2234567788999999999999999988899999999999986543  44 88888888    8899999


Q ss_pred             HHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCC
Q 024488          224 KKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       224 K~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      |.++|.+++.++++ +++++++||+       ++|||+.
T Consensus       159 K~~~e~~~~~~~~~-g~~~~ilrp~-------~v~g~~~  189 (342)
T 2x4g_A          159 KWALDEQAREQARN-GLPVVIGIPG-------MVLGELD  189 (342)
T ss_dssp             HHHHHHHHHHHHHT-TCCEEEEEEC-------EEECSCC
T ss_pred             HHHHHHHHHHHhhc-CCcEEEEeCC-------ceECCCC
Confidence            99999999999887 9999999999       9999876

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.96  E-value=4.7e-29  Score=215.43  Aligned_cols=180  Identities=15%  Similarity=0.150  Sum_probs=139.4

Q ss_pred             CCCCCCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC---------CCcchhhhhhhcCCCCCceEEEEccCCC
Q 024488           63 FSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR---------GNIGAVKVLQELFPEPGRLQFIYADLGD  133 (267)
Q Consensus        63 ~~~~~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~d  133 (267)
                      +.....+ |++|||||++|||+++|++|+++|++|++++|+..         +.+.+.+..+++...+.++.++.+|++|
T Consensus        22 m~~~l~g-k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~  100 (299)
T 3t7c_A           22 MAGKVEG-KVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRD  100 (299)
T ss_dssp             CCCTTTT-CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             cccccCC-CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCC
Confidence            4333445 99999999999999999999999999999997532         2333344444443446689999999999


Q ss_pred             HHHHHHHhhc-----CCCCEEEEccccCCcCC-Cc----cChHHHHHHhHHHH----HHHHHHHHHcC-CCEEEEEeccc
Q 024488          134 AKAVNKFFSE-----NAFDAVMHFAAVAYVGE-ST----LDPLKYYHNITSNT----LVVLESMARHG-VDTLIYSSTCA  198 (267)
Q Consensus       134 ~~~v~~~~~~-----~~~D~li~~Ag~~~~~~-~~----~~~~~~~~~~~~~~----~~~l~~~~~~~-~~~iV~vSS~~  198 (267)
                      .+++++++++     +++|+||||||+..... ..    +..+..++.|+.++    +.++|.|.+.+ .++||++||.+
T Consensus       101 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~  180 (299)
T 3t7c_A          101 FDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIG  180 (299)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChh
Confidence            9999998875     68999999999865433 22    23344566777664    44666666654 68999999988


Q ss_pred             cccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          199 TYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       199 ~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .+.           +.+....|++||++++.++++++.|   .|+++++|+||+|.|..
T Consensus       181 ~~~-----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  228 (299)
T 3t7c_A          181 GLR-----------GAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPM  228 (299)
T ss_dssp             GTS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTT
T ss_pred             hcc-----------CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCcc
Confidence            773           4556789999999999999999998   48999999999888754

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.96  E-value=3e-29  Score=223.14  Aligned_cols=178  Identities=25%  Similarity=0.323  Sum_probs=141.3

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      .||+||||||+|+||++++++|+++| ++|++++|......   +.+.    ...+++++.+|++|.++++++++  ++|
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~---~~l~----~~~~v~~~~~Dl~d~~~l~~~~~--~~d  101 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEK---INVP----DHPAVRFSETSITDDALLASLQD--EYD  101 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCG---GGSC----CCTTEEEECSCTTCHHHHHHCCS--CCS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCch---hhcc----CCCceEEEECCCCCHHHHHHHhh--CCC
Confidence            35899999999999999999999999 99999997543321   1111    13478899999999999999988  899


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEEeccccccCCCCCCCC--CCC---CC-CCCChH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYGEPEKMPIT--EET---PQ-APINPY  220 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~iV~vSS~~~~g~~~~~~~~--e~~---~~-~~~~~Y  220 (267)
                      +|||+||.........++++.++.|+.++.++++++.+. +.++||++||.++||.....+++  |+.   +. .+.+.|
T Consensus       102 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y  181 (377)
T 2q1s_A          102 YVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPY  181 (377)
T ss_dssp             EEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHH
T ss_pred             EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCch
Confidence            999999975433233466788899999999999999988 78899999999999876666777  877   66 778999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCC
Q 024488          221 GKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       221 ~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      +.+|.++|.+++.++++++++++++||+       ++|||+.
T Consensus       182 ~~sK~~~E~~~~~~~~~~gi~~~ilRp~-------~v~G~~~  216 (377)
T 2q1s_A          182 SMSKIFGEFYSVYYHKQHQLPTVRARFQ-------NVYGPGE  216 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEEC-------CEECTTC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEeec-------cEECCCC
Confidence            9999999999999998889999999999       9999876

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.96  E-value=2.6e-29  Score=214.00  Aligned_cols=173  Identities=14%  Similarity=0.100  Sum_probs=136.2

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      ..+ |++|||||+||||+++|++|+++|++|++++|+....++..+.+++   .+.++.++.+|++|.+++++++++   
T Consensus        26 l~~-k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (270)
T 3ftp_A           26 LDK-QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQ---AGLEGRGAVLNVNDATAVDALVESTLK  101 (270)
T ss_dssp             TTT-CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH---HTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            444 9999999999999999999999999999999754333333333332   245788999999999999998875   


Q ss_pred             --CCCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHH----HHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~----~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                        +++|+||||||+.......+    ..+..++.|+.++.    .+++.|.+++.++||++||.+.+.           +
T Consensus       102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~  170 (270)
T 3ftp_A          102 EFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSA-----------G  170 (270)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------C
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC-----------C
Confidence              68999999999875544333    33345566777644    466677777788999999987763           4


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .++...|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       171 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  214 (270)
T 3ftp_A          171 NPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDM  214 (270)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcc
Confidence            556789999999999999999998   58999999999888753

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.96  E-value=5.5e-29  Score=211.92  Aligned_cols=172  Identities=16%  Similarity=0.102  Sum_probs=136.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||+++|++|+++|++|++++|.  +.+...+..+++...+.++.++.+|++|.+++++++++     +
T Consensus        28 ~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g  105 (269)
T 4dmm_A           28 DRIALVTGASRGIGRAIALELAAAGAKVAVNYAS--SAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG  105 (269)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC--ChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4999999999999999999999999999999863  22333333333333356889999999999999998876     6


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+.......+    +.+..++.|+.+    ++.+++.|.+++.++||++||.+.+.           +.+.
T Consensus       106 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  174 (269)
T 4dmm_A          106 RLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEM-----------GNPG  174 (269)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHH-----------CCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC-----------CCCC
Confidence            8999999999875544333    334455667666    44567777777889999999987763           4456


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       175 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  215 (269)
T 4dmm_A          175 QANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDM  215 (269)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSC
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcc
Confidence            789999999999999999998   68999999999877754

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.96  E-value=1.4e-28  Score=206.83  Aligned_cols=170  Identities=15%  Similarity=0.132  Sum_probs=133.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+..   .+.+..+++...+.++.++.+|++|.+++++++++     +
T Consensus         7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            7 GKVALITGASSGIGEATARALAAEGAAVAIAARRVE---KLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG   83 (247)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999997533   33333333322245788999999999999988875     6


Q ss_pred             CCCEEEEccccCCcCCCccCh----HHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+....+..+..    +..++.|+.++    +.++|.|.+++ ++||++||.+.+.           +.++
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~-----------~~~~  151 (247)
T 2jah_A           84 GLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRV-----------NVRN  151 (247)
T ss_dssp             CCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTC-----------CCTT
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcC-----------CCCC
Confidence            899999999986544433322    34456676664    44667777777 8999999988763           4456


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|++||++.+.+++.++.|   .|+++++|+||+|.|..
T Consensus       152 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  192 (247)
T 2jah_A          152 AAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTEL  192 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSG
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcc
Confidence            789999999999999999987   58999999999888865

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.96  E-value=8.8e-29  Score=210.82  Aligned_cols=169  Identities=14%  Similarity=0.076  Sum_probs=135.1

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      ..+ |++|||||+||||+++|++|+++|++|++++|+..   .+.+..+++   +.++.++.+|++|.++++++++.   
T Consensus         9 l~~-k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (271)
T 3tzq_B            9 LEN-KVAIITGACGGIGLETSRVLARAGARVVLADLPET---DLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTID   81 (271)
T ss_dssp             TTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTS---CHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHH---HHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHH
Confidence            344 99999999999999999999999999999997543   333333443   45788999999999999998876   


Q ss_pred             --CCCCEEEEccccCCc--CC----CccChHHHHHHhHHHHH----HHHHHHHHcCCCEEEEEeccccccCCCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYV--GE----STLDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~--~~----~~~~~~~~~~~~~~~~~----~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~  211 (267)
                        +++|+||||||+...  ..    ..+..+..++.|+.++.    .++|.|.+++.++||++||.+.+.          
T Consensus        82 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----------  151 (271)
T 3tzq_B           82 TFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHA----------  151 (271)
T ss_dssp             HHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS----------
T ss_pred             HcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcC----------
Confidence              689999999998633  11    22233455667777744    466777888889999999988873          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                       +.++...|++||++++.++++++.|   +|+++++|+||+|.|.
T Consensus       152 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~  195 (271)
T 3tzq_B          152 -AYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTP  195 (271)
T ss_dssp             -BCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCT
T ss_pred             -CCCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCc
Confidence             4556789999999999999999998   7899999999966664

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.96  E-value=5.1e-29  Score=209.88  Aligned_cols=174  Identities=18%  Similarity=0.107  Sum_probs=133.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+.+......++.++.+|++|.+++++++++     +
T Consensus         7 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (250)
T 3nyw_A            7 KGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYG   86 (250)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcC
Confidence            38999999999999999999999999999999755444444444433322235788999999999999988876     6


Q ss_pred             CCCEEEEccccCCcCCCccChH----HHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPL----KYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~----~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+...... +.+.    ..++.|+.+    ++.++|.|++++.++||++||.+.+.           +..+
T Consensus        87 ~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  154 (250)
T 3nyw_A           87 AVDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKY-----------GFAD  154 (250)
T ss_dssp             CEEEEEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------------CC
T ss_pred             CCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcC-----------CCCC
Confidence            89999999998655444 3333    344566665    45577777878889999999977762           3444


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ...|++||++.+.+++.++.|   .|+++++|+||+|.|...
T Consensus       155 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~  196 (250)
T 3nyw_A          155 GGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMA  196 (250)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchh
Confidence            789999999999999999988   589999999999888554

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.96  E-value=4.3e-29  Score=206.63  Aligned_cols=169  Identities=15%  Similarity=0.192  Sum_probs=139.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      ||+|+||||+|+||++++++|+++|++|++++|+....+.          ...+++++.+|++|.++++++++  ++|+|
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~~Dl~d~~~~~~~~~--~~d~v   71 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI----------ENEHLKVKKADVSSLDEVCEVCK--GADAV   71 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC----------CCTTEEEECCCTTCHHHHHHHHT--TCSEE
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh----------ccCceEEEEecCCCHHHHHHHhc--CCCEE
Confidence            5899999999999999999999999999999975433211          12578999999999999999998  79999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (267)
                      ||+||....      ..+.++.|+.++.++++++.+.+.++||++||.++++..... ..++.+..+.+.|+.+|.+.|.
T Consensus        72 i~~a~~~~~------~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~-~~~~~~~~p~~~Y~~sK~~~e~  144 (227)
T 3dhn_A           72 ISAFNPGWN------NPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGL-RLMDSGEVPENILPGVKALGEF  144 (227)
T ss_dssp             EECCCC------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTE-EGGGTTCSCGGGHHHHHHHHHH
T ss_pred             EEeCcCCCC------ChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCC-ccccCCcchHHHHHHHHHHHHH
Confidence            999986421      123677899999999999999998999999998877543322 2345566778899999999999


Q ss_pred             HHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          230 IILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       230 l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      +++.++++.+++++++||+       ++|||+...
T Consensus       145 ~~~~~~~~~~~~~~ilrp~-------~v~g~~~~~  172 (227)
T 3dhn_A          145 YLNFLMKEKEIDWVFFSPA-------ADMRPGVRT  172 (227)
T ss_dssp             HHHTGGGCCSSEEEEEECC-------SEEESCCCC
T ss_pred             HHHHHhhccCccEEEEeCC-------cccCCCccc
Confidence            9999998899999999999       888887653

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.96  E-value=2e-28  Score=210.91  Aligned_cols=172  Identities=19%  Similarity=0.135  Sum_probs=135.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCC-CceEEEEccCCCHHHHHHHhhc----
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEP-GRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      .+|+||||||+||||++++++|+++|++|++++|+...   +.+..+++...+ .++.++.+|++|.+++++++++    
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  116 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRE---LSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA  116 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGG---GHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            34999999999999999999999999999999975443   333334443333 5789999999999999988875    


Q ss_pred             -CCCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                       +++|+||||||+.......+    ..+..++.|+.++..    +++.|.+.+.++||++||.+.+.          .+.
T Consensus       117 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~----------~~~  186 (293)
T 3rih_A          117 FGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPV----------TGY  186 (293)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTT----------BBC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhcc----------CCC
Confidence             68999999999875544333    333455677777544    56666788889999999977531          134


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      ++...|+.||++++.+++.++.|   .|+++++|+||+|.|.
T Consensus       187 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~  228 (293)
T 3rih_A          187 PGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTE  228 (293)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCc
Confidence            55789999999999999999988   6899999999977763

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.96  E-value=6.8e-29  Score=222.19  Aligned_cols=186  Identities=26%  Similarity=0.288  Sum_probs=145.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcc-------------hhhhhhhcC-CCCCceEEEEccCCCHH
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIG-------------AVKVLQELF-PEPGRLQFIYADLGDAK  135 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~-------------~~~~~~~~~-~~~~~~~~~~~Dl~d~~  135 (267)
                      +++||||||+||||++++++|+++|++|++++|..+....             +.+.+.+.. ....+++++.+|++|.+
T Consensus        11 ~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~   90 (404)
T 1i24_A           11 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   90 (404)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHH
Confidence            5899999999999999999999999999999874332110             011111100 01246889999999999


Q ss_pred             HHHHHhhcCCCCEEEEccccCCcCCCccChH---HHHHHhHHHHHHHHHHHHHcCC-CEEEEEeccccccCCCCCCCCCC
Q 024488          136 AVNKFFSENAFDAVMHFAAVAYVGESTLDPL---KYYHNITSNTLVVLESMARHGV-DTLIYSSTCATYGEPEKMPITEE  211 (267)
Q Consensus       136 ~v~~~~~~~~~D~li~~Ag~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~-~~iV~vSS~~~~g~~~~~~~~e~  211 (267)
                      +++++++..++|+|||+||.........+++   ..++.|+.++.++++++.+.+. ++||++||.++||... .+++|+
T Consensus        91 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~~~E~  169 (404)
T 1i24_A           91 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-IDIEEG  169 (404)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SCBCSS
T ss_pred             HHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CCCCcc
Confidence            9999998445999999999754322223343   3678899999999999998876 5999999999998654 356664


Q ss_pred             --------------CCCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          212 --------------TPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       212 --------------~~~~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                                    .+..+.+.|+.||+++|.+++.++.+++++++++||+       ++|||+..
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~-------~v~Gp~~~  228 (404)
T 1i24_A          170 YITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQG-------VVYGVKTD  228 (404)
T ss_dssp             EEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC-------EEECSCCT
T ss_pred             ccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecc-------eeeCCCCC
Confidence                          3667788999999999999999988889999999999       99999864

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.96  E-value=3.1e-29  Score=214.18  Aligned_cols=178  Identities=15%  Similarity=0.107  Sum_probs=137.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC---------CCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHH
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR---------GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF  140 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~  140 (267)
                      +|++|||||+||||++++++|+++|++|++++|+..         +.+++.+..+++...+.++.++.+|++|+++++++
T Consensus        13 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   92 (278)
T 3sx2_A           13 GKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAA   92 (278)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence            399999999999999999999999999999997521         12233333333323356899999999999999998


Q ss_pred             hhc-----CCCCEEEEccccCCcCCCccChHHHHHHhHHHHH----HHHHHHHHcC-CCEEEEEeccccccCCCCCCCCC
Q 024488          141 FSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTL----VVLESMARHG-VDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       141 ~~~-----~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                      +++     +++|+||||||+.......++.+..++.|+.++.    .++|.|.+++ .++||++||.+.+....      
T Consensus        93 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------  166 (278)
T 3sx2_A           93 LQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG------  166 (278)
T ss_dssp             HHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc------
Confidence            876     6899999999987554444555667778877754    4666677664 68999999987763211      


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                       .+.++...|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       167 -~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~  212 (278)
T 3sx2_A          167 -SADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPM  212 (278)
T ss_dssp             -CSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTT
T ss_pred             -cCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCcc
Confidence             12245678999999999999999988   57999999999887754

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.96  E-value=2.2e-28  Score=213.66  Aligned_cols=170  Identities=27%  Similarity=0.383  Sum_probs=140.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|+||||||+||||++++++|+++|++|++++|......+   ..+++    .+++++.+|++|.++++++++..++|+|
T Consensus        20 ~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~l----~~v~~~~~Dl~d~~~~~~~~~~~~~D~v   92 (330)
T 2pzm_A           20 HMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKRE---VLPPV----AGLSVIEGSVTDAGLLERAFDSFKPTHV   92 (330)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGG---GSCSC----TTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchh---hhhcc----CCceEEEeeCCCHHHHHHHHhhcCCCEE
Confidence            4899999999999999999999999999999985433221   11111    3688999999999999998875468999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCC--CCCCCCCCCCCChHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKM--PITEETPQAPINPYGKAKKMA  227 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~--~~~e~~~~~~~~~Y~~sK~a~  227 (267)
                      |||||..... ...+++  ++.|+.++.++++++.+.+.++||++||.++|+.....  +++|+.  .+.+.|+.+|+++
T Consensus        93 ih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~--~~~~~Y~~sK~~~  167 (330)
T 2pzm_A           93 VHSAAAYKDP-DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT--APFTSYGISKTAG  167 (330)
T ss_dssp             EECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC--CCCSHHHHHHHHH
T ss_pred             EECCccCCCc-cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC--CCCChHHHHHHHH
Confidence            9999976432 222333  88999999999999998888999999999999865443  677776  6688999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEeccccccccceeecCCC
Q 024488          228 EDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       228 e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      |.+++.+    +++.+++||+       ++|||+.
T Consensus       168 e~~~~~~----~~~~~~iR~~-------~v~gp~~  191 (330)
T 2pzm_A          168 EAFLMMS----DVPVVSLRLA-------NVTGPRL  191 (330)
T ss_dssp             HHHHHTC----SSCEEEEEEC-------EEECTTC
T ss_pred             HHHHHHc----CCCEEEEeee-------eeECcCC
Confidence            9999886    7899999999       9999986

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.96  E-value=2.1e-28  Score=209.77  Aligned_cols=174  Identities=16%  Similarity=0.135  Sum_probs=137.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||+++|++|+++|++|++++|+.   +.+.+..+++...+.++.++++|++|.+++++++++     +
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (283)
T 3v8b_A           28 SPVALITGAGSGIGRATALALAADGVTVGALGRTR---TEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFG  104 (283)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSH---HHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            48999999999999999999999999999999643   344444455544566899999999999999998876     6


Q ss_pred             CCCEEEEccccCCc-CCCcc----ChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYV-GESTL----DPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~-~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||+... .+..+    ..+..++.|+.++    +.++|.|++++.++||++||.+.+..         .+.+
T Consensus       105 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~---------~~~~  175 (283)
T 3v8b_A          105 HLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRT---------FTTP  175 (283)
T ss_dssp             CCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB---------CCST
T ss_pred             CCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccC---------CCCC
Confidence            89999999998533 33322    2334556676664    45677778888899999999877521         1345


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      +...|++||++++.+++.++.|   .|+++++|+||+|.|...
T Consensus       176 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  218 (283)
T 3v8b_A          176 GATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNIS  218 (283)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTT
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcc
Confidence            6789999999999999999998   579999999998888654

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.96  E-value=9.2e-29  Score=209.60  Aligned_cols=170  Identities=13%  Similarity=0.099  Sum_probs=132.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCC-CCceEEEEccCCCHHHHHHHhhc-----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      +|++|||||+||||++++++|+++|++|++++|+..   +..+..+++... +.++.++.+|++|.+++++++++     
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (263)
T 3ai3_A            7 GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVD---RLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSF   83 (263)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHH---HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            389999999999999999999999999999997543   222222222111 34688999999999999988875     


Q ss_pred             CCCCEEEEccccCCcCCCccC----hHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTLD----PLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +++|+||||||+....+..+.    .+..++.|+.++    +.++|.|.+++.++||++||.+.+.           +.+
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  152 (263)
T 3ai3_A           84 GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQ-----------PLW  152 (263)
T ss_dssp             SSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC-----------CCC
Confidence            589999999998654433332    234456666664    4567777777788999999988874           345


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      +...|+.||++.+.+++.++.|   +|+++++|+||+|+|.
T Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  193 (263)
T 3ai3_A          153 YEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTP  193 (263)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCH
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc
Confidence            5779999999999999999988   6899999999977764

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.96  E-value=1.6e-28  Score=208.34  Aligned_cols=169  Identities=12%  Similarity=0.075  Sum_probs=133.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||++|||++++++|+++|++|++++|+..   .+.+..+++...+.++.++.+|++|.+++++++++     +
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (264)
T 3ucx_A           11 DKVVVISGVGPALGTTLARRCAEQGADLVLAARTVE---RLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG   87 (264)
T ss_dssp             TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHH---HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            399999999999999999999999999999997443   33333333333356899999999999999998876     6


Q ss_pred             CCCEEEEccccC-CcCCCcc----ChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVA-YVGESTL----DPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~-~~~~~~~----~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||.. ...+..+    ..+..++.|+.++..    ++|.|.+.+ ++||++||.+.+.           +.+
T Consensus        88 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~-----------~~~  155 (264)
T 3ucx_A           88 RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRH-----------SQA  155 (264)
T ss_dssp             CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGC-----------CCT
T ss_pred             CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhcc-----------CCC
Confidence            899999999875 2233222    334455667766444    556666665 8999999988773           455


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      +...|+.||++++.+++.++.|   +|+++++|+||+|.|.
T Consensus       156 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~  196 (264)
T 3ucx_A          156 KYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGG  196 (264)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccc
Confidence            6789999999999999999998   7899999999988764

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.96  E-value=1e-28  Score=211.28  Aligned_cols=172  Identities=13%  Similarity=0.044  Sum_probs=135.7

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      .+|++|||||+||||+++|++|+++|++|++++|+.   +.+.+..+++...+.++.++.+|++|.+++++++++     
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDA---KNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF   99 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            349999999999999999999999999999999643   334444444444466899999999999999988875     


Q ss_pred             CCCCEEEEccccCCcCCCccCh----HHHHHHhHHHHHHH----HH--HHHHcCCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVV----LE--SMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~~----l~--~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                      +++|+||||||+....+..+.+    +..++.|+.++..+    ++  .|.+++.++||++||.+.+.           +
T Consensus       100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~-----------~  168 (279)
T 3sju_A          100 GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQ-----------G  168 (279)
T ss_dssp             CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTS-----------C
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhcc-----------C
Confidence            6899999999987654433333    34455777775554    44  35556778999999988763           4


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .++...|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       169 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  212 (279)
T 3sju_A          169 VMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPM  212 (279)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchH
Confidence            556789999999999999999998   58999999999888744

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.96  E-value=1.3e-28  Score=210.41  Aligned_cols=169  Identities=17%  Similarity=0.064  Sum_probs=136.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      .+|++|||||+||||+++|++|+++|++|++++|+.   +.+.+..+++   +.++.++.+|++|.+++++++++     
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDG---DAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAAF  101 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSH---HHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence            349999999999999999999999999999999643   3333433444   45788999999999999988875     


Q ss_pred             CCCCEEEEccccCCcCCCcc----ChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +++|+||||||+....+..+    +.+..++.|+.+    ++.++|.|.+++.++||++||.+.+.           +.+
T Consensus       102 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~-----------~~~  170 (277)
T 3gvc_A          102 GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV-----------AVG  170 (277)
T ss_dssp             SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------CCT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc-----------CCC
Confidence            68999999999875544333    334455667776    45577778778889999999988763           455


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       171 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  212 (277)
T 3gvc_A          171 GTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPM  212 (277)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCch
Confidence            6789999999999999999988   68999999999887753

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.96  E-value=1.1e-28  Score=209.53  Aligned_cols=173  Identities=14%  Similarity=0.095  Sum_probs=135.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||++|||++++++|+++|++|++++|+....++..+.+.+.. .+.++.++.+|++|.++++++++.     +
T Consensus         8 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (265)
T 3lf2_A            8 EAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRF-PGARLFASVCDVLDALQVRAFAEACERTLG   86 (265)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS-TTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            4999999999999999999999999999999975433333333333211 123589999999999999988876     6


Q ss_pred             CCCEEEEccccCCcCCCccCh----HHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+....+..+.+    +..++.|+.++    +.++|.|.+++.++||++||.+.+.           +.+.
T Consensus        87 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  155 (265)
T 3lf2_A           87 CASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQ-----------PEPH  155 (265)
T ss_dssp             SCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTS-----------CCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCC-----------CCCC
Confidence            899999999986554433333    34456676664    4466667777778999999988763           4556


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       156 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~  196 (265)
T 3lf2_A          156 MVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQ  196 (265)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCch
Confidence            789999999999999999998   58999999999888743

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.96  E-value=2.4e-28  Score=205.49  Aligned_cols=169  Identities=16%  Similarity=0.155  Sum_probs=132.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+..  +...+.+++.   +.++.++++|++|.+++++++++     +
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (249)
T 2ew8_A            7 DKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNL---GRRVLTVKCDVSQPGDVEAFGKQVISTFG   81 (249)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCch--hHHHHHHHhc---CCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999997431  2333333322   45788999999999999988765     6


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+....+..+    ..+..++.|+.+    ++.++|.|.+++.++||++||.+.+.           +.++
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  150 (249)
T 2ew8_A           82 RCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL-----------KIEA  150 (249)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS-----------CCSS
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc-----------CCCC
Confidence            8999999999865443222    334456677777    55577778888788999999988873           4456


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++.+.+++.++.|   .|+++++|+||+|.|..
T Consensus       151 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  191 (249)
T 2ew8_A          151 YTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTAT  191 (249)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCcc
Confidence            789999999999999999988   58999999999888755

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.96  E-value=1e-28  Score=211.18  Aligned_cols=168  Identities=17%  Similarity=0.181  Sum_probs=138.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+||||||+||||++++++|+++|++|++++|+..   ...+..++.   +.++.++.+|++|.+++++++++     +
T Consensus         5 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (281)
T 3m1a_A            5 AKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTE---ALDDLVAAY---PDRAEAISLDVTDGERIDVVAADVLARYG   78 (281)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGG---GGHHHHHHC---TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHhc---cCCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence            489999999999999999999999999999997543   333333332   45789999999999999988875     5


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+....+..    ++.+..++.|+.+    ++.+++.|++++.++||++||.+.+.           +.++
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  147 (281)
T 3m1a_A           79 RVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQL-----------SFAG  147 (281)
T ss_dssp             CCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------CCTT
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC-----------CCCC
Confidence            899999999986544333    3334566788888    78889999888889999999988763           5567


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|++||++++.+++.++.|   +|+++++++||+|.|..
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  188 (281)
T 3m1a_A          148 FSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNL  188 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccccc
Confidence            889999999999999999998   79999999999777744

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.96  E-value=1.8e-28  Score=209.54  Aligned_cols=168  Identities=18%  Similarity=0.189  Sum_probs=135.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||+++|++|+++|++|++++|+.   +.+.+..++.   +.++.++++|++|.+++++++++     +
T Consensus        27 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (277)
T 4dqx_A           27 QRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNE---DAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEKTTAKWG  100 (277)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH---HHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            49999999999999999999999999999999643   3333333333   45788999999999999998876     6


Q ss_pred             CCCEEEEccccCCcCCCccChHH----HHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~----~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+....+..+.+.+    .++.|+.+    ++.++|.|++++.++||++||.+.+.           +.++
T Consensus       101 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  169 (277)
T 4dqx_A          101 RVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATS-----------AIAD  169 (277)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTS-----------CCTT
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCc-----------CCCC
Confidence            89999999998765544443333    44567666    44577777777778999999988873           5566


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       170 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  210 (277)
T 4dqx_A          170 RTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPY  210 (277)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCch
Confidence            789999999999999999988   48999999999888754

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.96  E-value=9.3e-29  Score=210.18  Aligned_cols=174  Identities=18%  Similarity=0.192  Sum_probs=138.4

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CC
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NA  145 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~  145 (267)
                      ..+ |++|||||+||||++++++|+++|++|++++|+....++..+.+.+.. .+..+.++.+|++|.+++++++++ ++
T Consensus         8 l~~-k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~g~   85 (267)
T 3t4x_A            8 LKG-KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQY-PDAILQPVVADLGTEQGCQDVIEKYPK   85 (267)
T ss_dssp             CTT-CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHC-TTCEEEEEECCTTSHHHHHHHHHHCCC
T ss_pred             cCC-CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCceEEEEecCCCCHHHHHHHHHhcCC
Confidence            344 999999999999999999999999999999975433333333333321 134678899999999999999877 68


Q ss_pred             CCEEEEccccCCcCCCccChHH----HHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~----~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|+||||||+.......+.+.+    .++.|+.+    ++.++|.|.+++.++||++||.+.+.           +.++.
T Consensus        86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  154 (267)
T 3t4x_A           86 VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIM-----------PSQEM  154 (267)
T ss_dssp             CSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTS-----------CCTTC
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhcc-----------CCCcc
Confidence            9999999998765544443333    35667777    56678888888888999999988873           55668


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      ..|++||++.+.+++.++.|   .|+++++|+||+|.|.
T Consensus       155 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~  193 (267)
T 3t4x_A          155 AHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTE  193 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCc
Confidence            89999999999999999988   4799999999988874

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.96  E-value=2.7e-28  Score=217.21  Aligned_cols=177  Identities=21%  Similarity=0.231  Sum_probs=147.0

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      .||+||||||+||||++++++|+++|++|++++|+.......    .     ..+++++.+|++|.+++.++++  ++|+
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~-----~~~v~~~~~Dl~d~~~~~~~~~--~~d~   96 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE----D-----MFCDEFHLVDLRVMENCLKVTE--GVDH   96 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG----G-----GTCSEEEECCTTSHHHHHHHHT--TCSE
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh----c-----cCCceEEECCCCCHHHHHHHhC--CCCE
Confidence            458999999999999999999999999999999865432211    0     1367889999999999999998  8999


Q ss_pred             EEEccccCCcCCC-ccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCC-----CCCCCCC--CCCCCChH
Q 024488          149 VMHFAAVAYVGES-TLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEK-----MPITEET--PQAPINPY  220 (267)
Q Consensus       149 li~~Ag~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~-----~~~~e~~--~~~~~~~Y  220 (267)
                      |||+||....... ..++++.++.|+.++.++++++.+.+.++||++||.++|+....     .+++|+.  +..+.+.|
T Consensus        97 Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y  176 (379)
T 2c5a_A           97 VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAF  176 (379)
T ss_dssp             EEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHH
T ss_pred             EEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChh
Confidence            9999997532111 45677889999999999999999988899999999999975321     3356665  56678899


Q ss_pred             HHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          221 GKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       221 ~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      +.+|.++|.+++.++++++++++++||+       ++|||+..
T Consensus       177 ~~sK~~~E~~~~~~~~~~gi~~~ilrp~-------~v~G~~~~  212 (379)
T 2c5a_A          177 GLEKLATEELCKHYNKDFGIECRIGRFH-------NIYGPFGT  212 (379)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEEC-------CEECTTSC
T ss_pred             HHHHHHHHHHHHHHHHHHCCCEEEEEeC-------ceeCcCCC
Confidence            9999999999999998889999999999       88888754

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.96  E-value=9.2e-29  Score=211.71  Aligned_cols=172  Identities=17%  Similarity=0.155  Sum_probs=137.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||+++|++|+++|++|++++|+.   +.+.+..+++...+.++.++.+|++|.++++++++.     +
T Consensus         8 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (280)
T 3tox_A            8 GKIAIVTGASSGIGRAAALLFAREGAKVVVTARNG---NALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFG   84 (280)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCH---HHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            49999999999999999999999999999998643   344444445544466899999999999999998875     6


Q ss_pred             CCCEEEEccccCCc-CCCc----cChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYV-GEST----LDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~-~~~~----~~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||+... .+..    +..+..++.|+.++    +.++|.|.+++.++||++||.+.+.          .+.+
T Consensus        85 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------~~~~  154 (280)
T 3tox_A           85 GLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHT----------AGFA  154 (280)
T ss_dssp             CCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTT----------BCCT
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCc----------CCCC
Confidence            89999999997532 2222    33345566777764    4467777887888999999988762          1345


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...|++||++++.+++.++.|   .|+++++|+||.|.|..
T Consensus       155 ~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~  196 (280)
T 3tox_A          155 GVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPA  196 (280)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTT
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCch
Confidence            6789999999999999999998   58999999999887754

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.96  E-value=1.3e-28  Score=209.24  Aligned_cols=170  Identities=15%  Similarity=0.094  Sum_probs=130.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      ..+|++|||||+||||+++|++|+++|++|++++|+.   +.+.+..++.   +.++.++.+|++|.+++++++++    
T Consensus        25 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (266)
T 3grp_A           25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTRE---DKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEVAERE   98 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHHHHHH
Confidence            3349999999999999999999999999999999643   3333333333   45789999999999999998875    


Q ss_pred             -CCCCEEEEccccCCcCCCccCh----HHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYVGESTLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                       +++|+||||||+.......+..    +..++.|+.+    ++.+++.|.+++.++||++||.+.+.           +.
T Consensus        99 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~-----------~~  167 (266)
T 3grp_A           99 MEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVV-----------GN  167 (266)
T ss_dssp             HTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-----------------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcC-----------CC
Confidence             6899999999987554433333    3445677777    66788888888889999999987762           44


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ++...|+.||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       168 ~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~  210 (266)
T 3grp_A          168 PGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAM  210 (266)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCch
Confidence            55789999999999999999998   58999999999887743

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.96  E-value=6.3e-29  Score=211.75  Aligned_cols=171  Identities=14%  Similarity=0.116  Sum_probs=137.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||+++|++|+++|++|++++|+.   +.+.+..+++...+.++.++.+|++|.+++++++++     +
T Consensus        26 gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  102 (271)
T 4ibo_A           26 GRTALVTGSSRGLGRAMAEGLAVAGARILINGTDP---SRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGI  102 (271)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCH---HHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            49999999999999999999999999999998643   333344444433456789999999999999998876     6


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHH----HHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~----~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+....+..+    +.+..++.|+.++.    .+++.|.+++.++||++||.+.+.           +.++
T Consensus       103 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~-----------~~~~  171 (271)
T 4ibo_A          103 DVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSEL-----------ARAT  171 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------BCTT
T ss_pred             CCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCC-----------CCCC
Confidence            8999999999875544333    33445667777644    457788887888999999987762           4556


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|++||++.+.+++.++.|   .|+++++|+||+|.|..
T Consensus       172 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  212 (271)
T 4ibo_A          172 VAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDM  212 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcc
Confidence            789999999999999999988   68999999999888754

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.96  E-value=1.7e-28  Score=210.21  Aligned_cols=172  Identities=15%  Similarity=0.090  Sum_probs=134.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCC-CCceEEEEccCCCHHHHHHHhhc-----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      +|++|||||+||||+++|++|+++|++|++++|+  +.+...+..+++... +.++.++.+|++|.+++++++++     
T Consensus        25 ~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  102 (281)
T 3v2h_A           25 TKTAVITGSTSGIGLAIARTLAKAGANIVLNGFG--APDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF  102 (281)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCC--CHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC--ChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence            4899999999999999999999999999999963  222333333333222 45789999999999999998876     


Q ss_pred             CCCCEEEEccccCCcCCCcc----ChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +++|+||||||+.......+    ..+..++.|+.++    +.++|.|.+++.++||++||.+.+.           +.+
T Consensus       103 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  171 (281)
T 3v2h_A          103 GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLV-----------ASP  171 (281)
T ss_dssp             SSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCccccc-----------CCC
Confidence            68999999999875554333    3334556677664    4466777888889999999988763           455


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ....|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       172 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  213 (281)
T 3v2h_A          172 FKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPL  213 (281)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcc
Confidence            6789999999999999999988   58999999999888854

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.96  E-value=2.4e-28  Score=206.80  Aligned_cols=171  Identities=13%  Similarity=0.053  Sum_probs=133.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc------
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (267)
                      +|++|||||+||||++++++|+++|++|++++|+..   ...+..+++...+.++.++.+|++|+++++++++.      
T Consensus         9 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (260)
T 2ae2_A            9 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQK---ELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH   85 (260)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999997543   33333333322245788999999999999988865      


Q ss_pred             CCCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +++|+||||||+....+..+    ..+..++.|+.++..    ++|.|.+++.++||++||.+.+.           +.+
T Consensus        86 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  154 (260)
T 2ae2_A           86 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL-----------AVP  154 (260)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS-----------CCT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc-----------CCC
Confidence            58999999999865433222    334456677776544    56667777778999999988763           445


Q ss_pred             CCChHHHHHHHHHHHHHHhhhcC---CCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKNS---DMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e~---g~~~~~vrp~~v~~~~  254 (267)
                      +...|+.||++++.+++.++.|+   |+++++|+||+|.|..
T Consensus       155 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  196 (260)
T 2ae2_A          155 YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSL  196 (260)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcc
Confidence            57899999999999999999884   8999999999888754

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.96  E-value=2.2e-28  Score=206.86  Aligned_cols=161  Identities=15%  Similarity=0.094  Sum_probs=128.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||++|||+++|++|+++|++|++++|+..  +.           ..+..++++|++|+++++++++.     +
T Consensus        11 GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~--~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   77 (261)
T 4h15_A           11 GKRALITAGTKGAGAATVSLFLELGAQVLTTARARP--EG-----------LPEELFVEADLTTKEGCAIVAEATRQRLG   77 (261)
T ss_dssp             TCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCC--TT-----------SCTTTEEECCTTSHHHHHHHHHHHHHHTS
T ss_pred             CCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCch--hC-----------CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            499999999999999999999999999999997432  11           12344789999999999988876     7


Q ss_pred             CCCEEEEccccCCc--CCCccChHH----HHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYV--GESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       145 ~~D~li~~Ag~~~~--~~~~~~~~~----~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      ++|+||||||+...  .+..+.+++    .++.|+.+    ++.++|.|++++.++||++||.+..-           +.
T Consensus        78 ~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~-----------~~  146 (261)
T 4h15_A           78 GVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVL-----------PL  146 (261)
T ss_dssp             SCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CC
T ss_pred             CCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhcc-----------CC
Confidence            89999999997543  233333333    34455554    56789999999989999999977652           33


Q ss_pred             C-CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          215 A-PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       215 ~-~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      + ....|++||++++.|+++++.|   +|+++++|.||+|.|..
T Consensus       147 ~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~  190 (261)
T 4h15_A          147 PESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEA  190 (261)
T ss_dssp             TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcc
Confidence            2 3678999999999999999998   68999999999988753

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.96  E-value=1.3e-28  Score=207.19  Aligned_cols=169  Identities=14%  Similarity=0.080  Sum_probs=134.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||+++|++|+++|++|++++|+..   ...+..+++   .....++.+|++|++++++++++     +
T Consensus         9 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~---~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (248)
T 3op4_A            9 GKVALVTGASRGIGKAIAELLAERGAKVIGTATSES---GAQAISDYL---GDNGKGMALNVTNPESIEAVLKAITDEFG   82 (248)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHH---HHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHh---cccceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            499999999999999999999999999999996432   333333333   23577899999999999998876     6


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+....+..+    +.+..++.|+.++    +.++|.|.+++.++||++||.+.+.           +.++
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~  151 (248)
T 3op4_A           83 GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM-----------GNAG  151 (248)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------CCTT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC-----------CCCC
Confidence            8999999999876544333    3334556676664    4567777778889999999987763           4556


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ...|++||++.+.+++.++.|   .|+++++|+||+|.|...
T Consensus       152 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~  193 (248)
T 3op4_A          152 QANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMT  193 (248)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTT
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchh
Confidence            889999999999999999998   589999999998887543

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.96  E-value=3.2e-28  Score=207.60  Aligned_cols=170  Identities=15%  Similarity=0.126  Sum_probs=136.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~  145 (267)
                      +|++|||||+||||+++|++|+++|++|++++|.    +...+..+++...+.++.++.+|++|.++++++.+.    ++
T Consensus        31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~  106 (273)
T 3uf0_A           31 GRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT----DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRR  106 (273)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS----THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH----HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCC
Confidence            4999999999999999999999999999999953    233333444444466899999999999999887543    68


Q ss_pred             CCEEEEccccCCcCCCccC----hHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTLD----PLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|+||||||+....+..+.    .+..++.|+.++    +.++|.|.+++.++||++||.+.+.           +.++.
T Consensus       107 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~-----------~~~~~  175 (273)
T 3uf0_A          107 VDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQ-----------GGRNV  175 (273)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCSSC
T ss_pred             CcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcC-----------CCCCC
Confidence            9999999998765543333    334556677664    4566777788889999999988873           45567


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       176 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  215 (273)
T 3uf0_A          176 AAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTAN  215 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCc
Confidence            89999999999999999998   68999999999887754

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.96  E-value=1.1e-28  Score=219.44  Aligned_cols=186  Identities=21%  Similarity=0.199  Sum_probs=149.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCc--chhhhhhhcCCCCC-ceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI--GAVKVLQELFPEPG-RLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      |+||||||+||||++++++|+++|++|++++|+.....  .+.+...+....+. ++.++.+|++|.+++.++++..++|
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  108 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD  108 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence            79999999999999999999999999999998654311  11111111111122 6889999999999999998854689


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-----CEEEEEeccccccCCCCCCCCCCCCCCCCChHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-----DTLIYSSTCATYGEPEKMPITEETPQAPINPYGK  222 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~  222 (267)
                      +|||+||.........+++..++.|+.++.++++++.+.+.     ++||++||.++||.... +++|+.+..+.+.|+.
T Consensus       109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~~~~~~Y~~  187 (381)
T 1n7h_A          109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAA  187 (381)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCCCCSHHHH
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCCCCCCchHH
Confidence            99999997543323456677889999999999999887643     49999999999987666 8899998889999999


Q ss_pred             HHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          223 AKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       223 sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      +|.++|.+++.++.+++++++++|++       ++|||+...
T Consensus       188 sK~~~E~~~~~~~~~~~~~~~~~r~~-------~~~gp~~~~  222 (381)
T 1n7h_A          188 SKCAAHWYTVNYREAYGLFACNGILF-------NHESPRRGE  222 (381)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEEC-------CEECTTSCT
T ss_pred             HHHHHHHHHHHHHHHhCCcEEEEEeC-------ceeCCCCCC
Confidence            99999999999998889999999999       999997643

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.96  E-value=4.9e-28  Score=204.58  Aligned_cols=170  Identities=14%  Similarity=0.116  Sum_probs=134.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+.   +.+.+..+++...+.++.++.+|++|.+++++++++     +
T Consensus         6 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            6 EKVVIITGGSSGMGKGMATRFAKEGARVVITGRTK---EKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG   82 (257)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            39999999999999999999999999999999643   344444444444466899999999999999998876     6


Q ss_pred             CCCEEEEccccCCcCCCccC----hHHHHHHhHHHHH----HHHHHHHH-cCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLD----PLKYYHNITSNTL----VVLESMAR-HGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~~----~~l~~~~~-~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||+....+..+.    .+..++.|+.++.    .++|.|.+ .+.++||++||...+.           +.+
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  151 (257)
T 3imf_A           83 RIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWD-----------AGP  151 (257)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGS-----------CCT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhcc-----------CCC
Confidence            89999999998655443333    3345566777644    45666644 4478999999988773           455


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc----CCCcEEEEeccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN----SDMAVMILRLVVFFTL  253 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e----~g~~~~~vrp~~v~~~  253 (267)
                      ....|++||++++.+++.++.|    +|+++++|+||+|.+.
T Consensus       152 ~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~  193 (257)
T 3imf_A          152 GVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERT  193 (257)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSC
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCC
Confidence            6789999999999999999976    3899999999977654

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.96  E-value=1.4e-28  Score=206.55  Aligned_cols=172  Identities=17%  Similarity=0.092  Sum_probs=135.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|.  +.+...+..+++...+.++.++.+|++|++++++++++     +
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            4 GKVALVTGASRGIGRAIAIDLAKQGANVVVNYAG--NEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC--CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999862  22233333333322245788999999999999998875     6


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+....+..    +..+..++.|+.+    ++.++|.|.+++.++||++||.+.+.           +.++
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  150 (246)
T 2uvd_A           82 QVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVT-----------GNPG  150 (246)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------CCTT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcC-----------CCCC
Confidence            899999999986544322    2334456677777    56678888887888999999987753           3345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++.+.+++.++.|   .|+++++|+||+|.|..
T Consensus       151 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  191 (246)
T 2uvd_A          151 QANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDM  191 (246)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGC
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcc
Confidence            779999999999999999987   58999999999888754

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.96  E-value=2.3e-28  Score=207.71  Aligned_cols=173  Identities=17%  Similarity=0.178  Sum_probs=134.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+.+.. .+.++.++.+|++|.+++++++++     +
T Consensus        13 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   91 (267)
T 1iy8_A           13 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA-PDAEVLTTVADVSDEAQVEAYVTATTERFG   91 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHC-TTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3999999999999999999999999999999975432222222222211 135788999999999999988875     6


Q ss_pred             CCCEEEEccccCCc-CCCcc----ChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYV-GESTL----DPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~-~~~~~----~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||+... .+..+    ..+..++.|+.+    ++.++|.|.+++.++||++||.+.+.           +.+
T Consensus        92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  160 (267)
T 1iy8_A           92 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR-----------GIG  160 (267)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------BCS
T ss_pred             CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcc-----------CCC
Confidence            89999999998644 33222    233455666665    45688888888889999999988763           345


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       161 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  202 (267)
T 1iy8_A          161 NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPM  202 (267)
T ss_dssp             SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcc
Confidence            5789999999999999999987   58999999999888754

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.96  E-value=3.6e-28  Score=206.57  Aligned_cols=165  Identities=18%  Similarity=0.165  Sum_probs=133.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |++|||||+||||++++++|+++|++|++++|+.   +.+    ++..  ...+.++.+|++|.++++++++.     ++
T Consensus        17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~---~~~----~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   87 (266)
T 3p19_A           17 KLVVITGASSGIGEAIARRFSEEGHPLLLLARRV---ERL----KALN--LPNTLCAQVDVTDKYTFDTAITRAEKIYGP   87 (266)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCH---HHH----HTTC--CTTEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH---HHH----HHhh--cCCceEEEecCCCHHHHHHHHHHHHHHCCC
Confidence            8999999999999999999999999999999642   222    2211  23688999999999999988875     68


Q ss_pred             CCEEEEccccCCcCCCccChH----HHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTLDPL----KYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|+||||||+.......+.+.    ..++.|+.++..    +++.|++++.++||++||.+.+.           +.++.
T Consensus        88 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~-----------~~~~~  156 (266)
T 3p19_A           88 ADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKK-----------TFPDH  156 (266)
T ss_dssp             EEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------CCTTC
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCC-----------CCCCC
Confidence            999999999876544433333    345677777544    78888888889999999988873           45567


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ..|++||++++.+++.++.|   .|+++++|+||+|.|...
T Consensus       157 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  197 (266)
T 3p19_A          157 AAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELL  197 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGG
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchh
Confidence            89999999999999999998   689999999998887543

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.96  E-value=3.3e-28  Score=205.83  Aligned_cols=167  Identities=17%  Similarity=0.105  Sum_probs=132.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+   .+.+.+..+++   +.++.++.+|++|++++++++++     +
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   81 (259)
T 4e6p_A            8 GKSALITGSARGIGRAFAEAYVREGATVAIADID---IERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEHAG   81 (259)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            3999999999999999999999999999999964   33444444444   34688999999999999988875     5


Q ss_pred             CCCEEEEccccCCcCCCccCh----HHHHHHhHHHHHH----HHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~----~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||+....+..+.+    +..++.|+.++..    +++.|.+++ .++||++||.+.+.           +.+
T Consensus        82 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  150 (259)
T 4e6p_A           82 GLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRR-----------GEA  150 (259)
T ss_dssp             SCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------CCT
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhcc-----------CCC
Confidence            899999999986554433333    3445577776544    556666655 67999999988773           455


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      +...|+.||++++.+++.++.|   .|+++++|+||+|.|.
T Consensus       151 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~  191 (259)
T 4e6p_A          151 LVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGE  191 (259)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCST
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccc
Confidence            6789999999999999999988   4899999999976664

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.96  E-value=2.7e-28  Score=207.40  Aligned_cols=172  Identities=16%  Similarity=0.126  Sum_probs=132.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+.+  ..+.++.++.+|++|.+++++++++     +
T Consensus        21 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (267)
T 1vl8_A           21 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTE--KYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   98 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--HHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH--hcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            49999999999999999999999999999999754322222222211  1134688899999999999988875     6


Q ss_pred             CCCEEEEccccCCcCCCccCh----HHHHHHhHHHHH----HHHHHHHHcCCCEEEEEeccc-cccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTL----VVLESMARHGVDTLIYSSTCA-TYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~----~~l~~~~~~~~~~iV~vSS~~-~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||+....+..+.+    +..++.|+.++.    .+++.|++++.++||++||.+ .+           .+.+
T Consensus        99 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~  167 (267)
T 1vl8_A           99 KLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE-----------VTMP  167 (267)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC-----------CCSS
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhc-----------cCCC
Confidence            899999999986544433322    345566777654    456677777778999999977 43           1345


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       168 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  209 (267)
T 1vl8_A          168 NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKM  209 (267)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTT
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccc
Confidence            5789999999999999999988   58999999999888754

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.96  E-value=2.2e-28  Score=214.18  Aligned_cols=175  Identities=21%  Similarity=0.327  Sum_probs=143.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC-HHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~D~  148 (267)
                      |+||||||+|+||++++++|+++ |++|++++|+....+   +    .. ...+++++.+|++| .+.++++++  ++|+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~----~~-~~~~~~~~~~D~~~~~~~~~~~~~--~~d~   70 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAIS---R----FL-NHPHFHFVEGDISIHSEWIEYHVK--KCDV   70 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGG---G----GT-TCTTEEEEECCTTTCSHHHHHHHH--HCSE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHH---H----hh-cCCCeEEEeccccCcHHHHHhhcc--CCCE
Confidence            47999999999999999999998 899999997543221   1    11 12468899999998 467888887  7899


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC-------CCCChHH
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-------APINPYG  221 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~-------~~~~~Y~  221 (267)
                      |||+||...+.....++++.++.|+.++.++++++.+.+ ++||++||.++|+.....+++|+.+.       .+.+.|+
T Consensus        71 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~  149 (345)
T 2bll_A           71 VLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYS  149 (345)
T ss_dssp             EEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHH
T ss_pred             EEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccH
Confidence            999999754332334667788899999999999999888 89999999999987666677777643       2345899


Q ss_pred             HHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          222 KAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       222 ~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      .+|.++|.+++.++++.+++++++||+       ++|||+..
T Consensus       150 ~sK~~~e~~~~~~~~~~~~~~~ilrp~-------~v~G~~~~  184 (345)
T 2bll_A          150 VSKQLLDRVIWAYGEKEGLQFTLFRPF-------NWMGPRLD  184 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEEC-------SEECSSCC
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEEEcCC-------cccCCCcc
Confidence            999999999999998889999999999       99999764

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.96  E-value=3.9e-28  Score=204.92  Aligned_cols=169  Identities=17%  Similarity=0.082  Sum_probs=134.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+..  +...   +++...+.++.++.+|++|.+++++++++     +
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~---~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (255)
T 2q2v_A            4 GKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APAL---AEIARHGVKAVHHPADLSDVAQIEALFALAEREFG   78 (255)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHH---HHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHH---HHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999997543  2222   22222345788899999999999998875     5


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+....+..+    ..+..++.|+.+    ++.++|.|.+++.++||++||.+.+.           +.++
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  147 (255)
T 2q2v_A           79 GVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLV-----------GSTG  147 (255)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------CCTT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhcc-----------CCCC
Confidence            8999999999865443322    233455666664    56688888888888999999988773           3445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++.+.+++.++.|   .|+++++|+||+|.|..
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  188 (255)
T 2q2v_A          148 KAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPL  188 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcc
Confidence            789999999999999999988   47999999999888743

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.96  E-value=4.4e-28  Score=207.09  Aligned_cols=175  Identities=15%  Similarity=0.138  Sum_probs=135.7

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      .+|++|||||+||||++++++|+++|++|++++|+....++..   +++...+.++.++++|++|.+++++++++     
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  107 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVA---DEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL  107 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH---HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3499999999999999999999999999999997544333333   33333356789999999999999998876     


Q ss_pred             CCCCEEEEccccCCcCCCccChHH----HHHHhHHHH----HHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTLDPLK----YYHNITSNT----LVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~----~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      +++|+||||||+.......+.+.+    .++.|+.++    +.+++.|.+++ .++||++||.+.+...         +.
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~---------~~  178 (276)
T 3r1i_A          108 GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN---------IP  178 (276)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------CS
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC---------CC
Confidence            689999999998765554443333    345676664    45666777665 4899999998776311         12


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      .+...|++||++++.+++.++.|   .|+++++|+||+|.|...
T Consensus       179 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~  222 (276)
T 3r1i_A          179 QQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELV  222 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTT
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcc
Confidence            34678999999999999999998   689999999998887543

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.96  E-value=2.6e-28  Score=206.20  Aligned_cols=168  Identities=15%  Similarity=0.122  Sum_probs=128.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+....++.   .+++   +.++.++.+|++|.++++++++.     +
T Consensus         7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (257)
T 3tpc_A            7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEP---AAEL---GAAVRFRNADVTNEADATAALAFAKQEFG   80 (257)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------------CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            39999999999999999999999999999999765433322   2222   35788999999999999998875     6


Q ss_pred             CCCEEEEccccCCcCCC--------ccChHHHHHHhHHHHHH----HHHHHHHc------CCCEEEEEeccccccCCCCC
Q 024488          145 AFDAVMHFAAVAYVGES--------TLDPLKYYHNITSNTLV----VLESMARH------GVDTLIYSSTCATYGEPEKM  206 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~--------~~~~~~~~~~~~~~~~~----~l~~~~~~------~~~~iV~vSS~~~~g~~~~~  206 (267)
                      ++|+||||||+......        .+..+..++.|+.++..    +++.|.++      +.++||++||.+.+.     
T Consensus        81 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~-----  155 (257)
T 3tpc_A           81 HVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD-----  155 (257)
T ss_dssp             CCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH-----
T ss_pred             CCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc-----
Confidence            89999999998644321        23334556777777554    55555553      467999999988873     


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          207 PITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       207 ~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                            +.++...|++||++++.+++.++.|   +|+++++|+||+|.|..
T Consensus       156 ------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  200 (257)
T 3tpc_A          156 ------GQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPM  200 (257)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-
T ss_pred             ------CCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChh
Confidence                  4556789999999999999999998   78999999999888754

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.96  E-value=3.6e-28  Score=206.85  Aligned_cols=162  Identities=14%  Similarity=0.148  Sum_probs=131.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      .+|+||||||+||||+++|++|+++|++|++++|+....             ...+..+++|++|.+++++++++     
T Consensus        13 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (269)
T 3vtz_A           13 TDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD-------------VNVSDHFKIDVTNEEEVKEAVEKTTKKY   79 (269)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C-------------TTSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc-------------cCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            349999999999999999999999999999999754321             12467789999999999998876     


Q ss_pred             CCCCEEEEccccCCcCCCccChHH----HHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTLDPLK----YYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +++|+||||||+....+..+.+.+    .++.|+.++    +.+++.|.+++.++||++||.+.+.           +.+
T Consensus        80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  148 (269)
T 3vtz_A           80 GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYA-----------ATK  148 (269)
T ss_dssp             SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------BCT
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc-----------CCC
Confidence            689999999998765544443333    445676664    5567778778889999999988874           455


Q ss_pred             CCChHHHHHHHHHHHHHHhhhcC--CCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKNS--DMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e~--g~~~~~vrp~~v~~~~  254 (267)
                      +...|++||++++.+++.++.|+  ++++++|+||+|.|..
T Consensus       149 ~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~  189 (269)
T 3vtz_A          149 NAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPM  189 (269)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcc
Confidence            67899999999999999999985  8999999999887743

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.96  E-value=3.9e-28  Score=207.00  Aligned_cols=171  Identities=15%  Similarity=0.106  Sum_probs=132.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc------
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (267)
                      +|+++||||+||||++++++|+++|++|++++|+..   .+.+..+++...+.++.++.+|++|.++++++++.      
T Consensus        21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   97 (273)
T 1ae1_A           21 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEK---ELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD   97 (273)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            399999999999999999999999999999997543   33333333322345788999999999999988864      


Q ss_pred             CCCCEEEEccccCCcCCCccCh----HHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTLDP----LKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +++|+||||||+....+..+.+    +..++.|+.++    +.++|.|++++.++||++||.+.+.           +.+
T Consensus        98 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~  166 (273)
T 1ae1_A           98 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS-----------ALP  166 (273)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS-----------CCT
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcC-----------CCC
Confidence            5899999999986544433333    33445666664    4466677777778999999988874           445


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...|+.||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       167 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  208 (273)
T 1ae1_A          167 SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPL  208 (273)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCch
Confidence            6789999999999999999988   48999999999877754

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.96  E-value=1.9e-28  Score=209.23  Aligned_cols=171  Identities=15%  Similarity=0.115  Sum_probs=136.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~  145 (267)
                      +|++|||||++|||+++|++|+++|++|++++|+....++..+.+.+   .+.++.++.+|++|.++++++++.    ++
T Consensus        33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~  109 (275)
T 4imr_A           33 GRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIA---SGGTAQELAGDLSEAGAGTDLIERAEAIAP  109 (275)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHH---TTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh---cCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            49999999999999999999999999999999865544444433333   356899999999999999888765    68


Q ss_pred             CCEEEEccccCCcCCCcc----ChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTL----DPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|+||||||+.......+    +.+..++.|+.+    ++.++|.|.+++.++||++||.+.+.           +..+.
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~-----------~~~~~  178 (275)
T 4imr_A          110 VDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR-----------PKSVV  178 (275)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTTB
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-----------CCCCc
Confidence            999999999865544333    233445667666    44577777888889999999988873           44556


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       179 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  218 (275)
T 4imr_A          179 TAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDR  218 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcc
Confidence            77999999999999999998   48999999999888743

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.96  E-value=1.7e-28  Score=208.47  Aligned_cols=173  Identities=14%  Similarity=0.087  Sum_probs=135.6

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      .+|++|||||+||||++++++|+++|++|++++|+....++..+.+.+.  .+.++.++.+|++|.+++++++++     
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   96 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQ--FGTDVHTVAIDLAEPDAPAELARRAAEAF   96 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--HCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--cCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3499999999999999999999999999999997543333333333221  245799999999999999988875     


Q ss_pred             CCCCEEEEccccCCcCCCccCh----HHHHHHhHHHH----HHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTLDP----LKYYHNITSNT----LVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~----~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      +++|+||||||+....+..+.+    +..++.|+.++    +.+++.|.+++ .++||++||.+.+.           +.
T Consensus        97 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~  165 (266)
T 4egf_A           97 GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALA-----------PL  165 (266)
T ss_dssp             TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------CC
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhcc-----------CC
Confidence            6899999999987655433333    33456676664    44667777665 67999999988873           55


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ++...|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       166 ~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  208 (266)
T 4egf_A          166 PDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEM  208 (266)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCch
Confidence            66789999999999999999998   58999999999888754

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.96  E-value=6.2e-28  Score=203.99  Aligned_cols=172  Identities=17%  Similarity=0.191  Sum_probs=134.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+++||||+||||++++++|+++|++|++++|+... +.+.+..+++...+.++.++.+|++|.+++++++++     ++
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQE-EQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGH-HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcch-HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999999975432 003333333333355789999999999999988875     68


Q ss_pred             CCEEEEccccCCcCCCcc----ChHHHHHHhHHHH----HHHHHHHHHcCC-CEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTL----DPLKYYHNITSNT----LVVLESMARHGV-DTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~~-~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      +|+||||||+....+..+    ..+..++.|+.++    +.+++.|.+++. ++||++||.+.+.           +.++
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  150 (258)
T 3a28_C           82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQ-----------GFPI  150 (258)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTS-----------CCTT
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhcc-----------CCCC
Confidence            999999999865443322    3334556676664    446677776676 8999999988763           4456


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       151 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  191 (258)
T 3a28_C          151 LSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGM  191 (258)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChh
Confidence            789999999999999999987   58999999999988754

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.96  E-value=3.4e-28  Score=206.08  Aligned_cols=171  Identities=15%  Similarity=0.105  Sum_probs=133.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+.   +.+.+..+++...+.++.++.+|++|.++++++++.     +
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (262)
T 1zem_A            7 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNR---EALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   83 (262)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            38999999999999999999999999999999643   233333333333355788999999999999888875     6


Q ss_pred             CCCEEEEccccC-CcCCCcc----ChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVA-YVGESTL----DPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~-~~~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||+. ...+..+    ..+..++.|+.++    +.+++.|.+++.++||++||.+.+.           +.+
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  152 (262)
T 1zem_A           84 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK-----------GPP  152 (262)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS-----------CCT
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc-----------CCC
Confidence            899999999976 3333222    2334556676664    4466777777778999999987763           344


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ....|+.||++.+.+++.++.|   .|+++++|+||+|.|..
T Consensus       153 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  194 (262)
T 1zem_A          153 NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGF  194 (262)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcch
Confidence            5779999999999999999987   58999999999888754

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.96  E-value=3.2e-28  Score=204.63  Aligned_cols=167  Identities=19%  Similarity=0.158  Sum_probs=134.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+.   +...+..+++   +.++.++.+|++|.+++++++++     +
T Consensus         6 gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   79 (247)
T 3rwb_A            6 GKTALVTGAAQGIGKAIAARLAADGATVIVSDINA---EGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALTG   79 (247)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCH---HHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            49999999999999999999999999999998643   3344444444   45788999999999999998876     6


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHH----HHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNT----LVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||+....+..+    ..+..++.|+.++    +.++|.|.+++ .++||++||.+.+.           +.+
T Consensus        80 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  148 (247)
T 3rwb_A           80 GIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFA-----------GTP  148 (247)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH-----------TCT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhcc-----------CCC
Confidence            8999999999875544333    2334556676664    44667788776 68999999988763           455


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      +...|++||++++.+++.++.|   +|+++++|+||+|.|.
T Consensus       149 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~  189 (247)
T 3rwb_A          149 NMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESD  189 (247)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCc
Confidence            6789999999999999999998   6899999999988874

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.96  E-value=3.4e-28  Score=204.11  Aligned_cols=171  Identities=14%  Similarity=0.082  Sum_probs=135.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+....++..+   ++...+.++.++.+|++|.+++++++++     +
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            5 EKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFEN---SMKEKGFKARGLVLNISDIESIQNFFAEIKAENL   81 (247)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4899999999999999999999999999999975433333333   3323356799999999999999998876     5


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHHHH----HHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~----~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+.......    +..+..++.|+.++.    .+++.|.+++.++||++||.+.+.           +.++
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  150 (247)
T 3lyl_A           82 AIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSA-----------GNPG  150 (247)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------CCTT
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc-----------CCCC
Confidence            899999999987554432    333445667777644    466667777788999999988763           4556


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|++||++.+.+++.++.|   .|+++++++||+|.|..
T Consensus       151 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  191 (247)
T 3lyl_A          151 QTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDM  191 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEeccc
Confidence            789999999999999999987   58999999999887754

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.96  E-value=3.3e-28  Score=205.27  Aligned_cols=172  Identities=20%  Similarity=0.156  Sum_probs=136.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      .|+||||||+||||+++|++|+++|++|+++++.  +.+...+..+++...+.++.++.+|++|.+++++++++     +
T Consensus        13 ~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   90 (256)
T 3ezl_A           13 QRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGP--NSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVG   90 (256)
T ss_dssp             CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECT--TCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC--CHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            4999999999999999999999999999998842  22233333333333356789999999999999988876     5


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+.......    ++.+..++.|+.+    ++.+++.|.+++.++||++||.+.+.           +.++
T Consensus        91 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  159 (256)
T 3ezl_A           91 EIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK-----------GQFG  159 (256)
T ss_dssp             CEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGG-----------SCSC
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcc-----------CCCC
Confidence            899999999987544333    2334456677777    55578888888889999999987763           4566


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|++||++.+.+++.++.|   .|+++++++||+|.|..
T Consensus       160 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  200 (256)
T 3ezl_A          160 QTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDM  200 (256)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcc
Confidence            889999999999999999988   68999999999888743

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.96  E-value=5.4e-28  Score=203.98  Aligned_cols=168  Identities=17%  Similarity=0.137  Sum_probs=134.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+.   +...+..+++   +.++.++.+|++|.+++++++++     +
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (254)
T 1hdc_A            5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVLD---EEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999999643   2333333333   34688899999999999988875     5


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+....+..+    ..+..++.|+.++    +.++|.|++++.++||++||.+.+.           +.++
T Consensus        79 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  147 (254)
T 1hdc_A           79 SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM-----------GLAL  147 (254)
T ss_dssp             CCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc-----------CCCC
Confidence            8999999999865433222    3344556676664    4788889888889999999988763           3456


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       148 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  188 (254)
T 1hdc_A          148 TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM  188 (254)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcc
Confidence            789999999999999999987   58999999999888754

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.96  E-value=5.5e-28  Score=204.82  Aligned_cols=173  Identities=17%  Similarity=0.114  Sum_probs=133.3

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      .+|+||||||+||||+++|++|+++|++|++++|+..   .+.+..+++...+.++.++.+|++|.++++++++.     
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~  104 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVE---KLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH  104 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            3499999999999999999999999999999997543   33333333333356889999999999999998876     


Q ss_pred             CCCCEEEEccccC-CcCCC----ccChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVA-YVGES----TLDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       144 ~~~D~li~~Ag~~-~~~~~----~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      +++|+||||||+. .....    .+..+..++.|+.++    +.+++.|.+.+.++||++||.+.+.           +.
T Consensus       105 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~  173 (262)
T 3rkr_A          105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKN-----------PV  173 (262)
T ss_dssp             SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSC-----------CC
T ss_pred             CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcC-----------CC
Confidence            6899999999983 22222    223344566777764    4466667777889999999988763           55


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ++...|+.||++.+.+++.++.|   .|+++++|+||+|.|.+.
T Consensus       174 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~  217 (262)
T 3rkr_A          174 ADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFG  217 (262)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcc
Confidence            66789999999999999999987   689999999998888554

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.96  E-value=4.4e-28  Score=211.05  Aligned_cols=175  Identities=17%  Similarity=0.167  Sum_probs=136.9

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC---------CCcchhhhhhhcCCCCCceEEEEccCCCHHHHHH
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR---------GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK  139 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~  139 (267)
                      .+|++|||||+||||+++|++|+++|++|++++++..         +.+++.+..+++...+.++.++.+|++|.+++++
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  124 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA  124 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            3499999999999999999999999999999987522         1223333333333345689999999999999999


Q ss_pred             Hhhc-----CCCCEEEEccccCCcCCCccC----hHHHHHHhHHHH----HHHHHHHHHcC-CCEEEEEeccccccCCCC
Q 024488          140 FFSE-----NAFDAVMHFAAVAYVGESTLD----PLKYYHNITSNT----LVVLESMARHG-VDTLIYSSTCATYGEPEK  205 (267)
Q Consensus       140 ~~~~-----~~~D~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~----~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~  205 (267)
                      ++++     +++|+||||||+.......+.    .+..++.|+.++    +.++|.|.+++ .++||++||.+.+.    
T Consensus       125 ~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~----  200 (317)
T 3oec_A          125 VVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR----  200 (317)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS----
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC----
Confidence            8876     689999999998765443333    334456676664    44677777765 68999999988773    


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          206 MPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       206 ~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                             +.++...|++||++++.++++++.|   .|+++++|+||+|.|..
T Consensus       201 -------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  245 (317)
T 3oec_A          201 -------GAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEM  245 (317)
T ss_dssp             -------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH
T ss_pred             -------CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCcc
Confidence                   4556789999999999999999998   58999999999888753

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.96  E-value=9.6e-29  Score=211.86  Aligned_cols=187  Identities=15%  Similarity=0.111  Sum_probs=140.2

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC---------CcchhhhhhhcCCCCCceEEEEccCCCHHHHHH
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---------NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK  139 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~---------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~  139 (267)
                      .+|+||||||+||||+++|++|+++|++|++++|+...         .+.+.+...++...+.++.++.+|++|.+++++
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   88 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR   88 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            34999999999999999999999999999999975221         112222222232335689999999999999998


Q ss_pred             Hhhc-----CCCCEEEEccccCCcC--CCccChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCC
Q 024488          140 FFSE-----NAFDAVMHFAAVAYVG--ESTLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       140 ~~~~-----~~~D~li~~Ag~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                      ++++     +++|+||||||+....  ...+..+..++.|+.++..++..+...  +.++||++||.+.+......+..+
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  168 (287)
T 3pxx_A           89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAG  168 (287)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC---
T ss_pred             HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccccccc
Confidence            8875     6899999999986543  233445667788888888877777654  457999999988764322222333


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ..+.++...|+.||++++.+++.++.|   .|+++++|+||+|.|...
T Consensus       169 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  216 (287)
T 3pxx_A          169 GPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDML  216 (287)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTT
T ss_pred             ccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccc
Confidence            334455678999999999999999998   489999999998887553

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.96  E-value=3.1e-28  Score=206.05  Aligned_cols=173  Identities=16%  Similarity=0.061  Sum_probs=132.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCC-CCceEEEEccCCCHHHHHHHhhc-----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      +|++|||||+||||++++++|+++|++|++++|+...  ...+..+++... +.++.++.+|++|.+++++++++     
T Consensus         4 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            4 GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAA--EIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHH--HHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcch--HHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            3899999999999999999999999999999975422  022222222111 34688899999999999988875     


Q ss_pred             CCCCEEEEccccCCcCCCcc----ChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +++|+||||||+....+..+    ..+..++.|+.+    ++.++|.|.+++.++||++||.+.+.           +.+
T Consensus        82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  150 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV-----------ASA  150 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCc-----------CCC
Confidence            68999999999865443222    234455667666    44567777777778999999988763           345


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      +...|+.||++++.+++.++.|   .|+++++|+||+|.|...
T Consensus       151 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  193 (260)
T 1x1t_A          151 NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLV  193 (260)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchH
Confidence            6789999999999999999987   589999999998888653

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.96  E-value=4.5e-28  Score=209.49  Aligned_cols=172  Identities=18%  Similarity=0.185  Sum_probs=136.9

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      .+|+||||||+||||+++|++|+++|++|++++|+..   .+.+..+++...+.++.++.+|++|.++++++++.     
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQP---ALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL  106 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence            3499999999999999999999999999999997543   33333333333356899999999999999988875     


Q ss_pred             CCCCEEEEccccCCcCCCc----cChHHHHHHhHHHHH----HHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTL----VVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~----~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      +++|+||||||+....+..    ++.+..++.|+.++.    .++|.|.+++ .++||++||.+.+.           +.
T Consensus       107 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~  175 (301)
T 3tjr_A          107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV-----------PN  175 (301)
T ss_dssp             SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS-----------CC
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC-----------CC
Confidence            6899999999987554433    233445667777744    4666677766 68999999988873           55


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ++...|++||++++.++++++.|   .|+++++|+||+|.|.+
T Consensus       176 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  218 (301)
T 3tjr_A          176 AGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKL  218 (301)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccc
Confidence            66789999999999999999988   48999999999998854

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.96  E-value=1e-27  Score=203.11  Aligned_cols=165  Identities=19%  Similarity=0.206  Sum_probs=131.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||+++|++|+++|++|++++|+.   ++..+.+++.     .+.++.+|++|.++++++++.     +
T Consensus        27 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~---~~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (260)
T 3gem_A           27 SAPILITGASQRVGLHCALRLLEHGHRVIISYRTE---HASVTELRQA-----GAVALYGDFSCETGIMAFIDLLKTQTS   98 (260)
T ss_dssp             CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSC---CHHHHHHHHH-----TCEEEECCTTSHHHHHHHHHHHHHHCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCh---HHHHHHHHhc-----CCeEEECCCCCHHHHHHHHHHHHHhcC
Confidence            48999999999999999999999999999999754   2333333333     378899999999999998876     6


Q ss_pred             CCCEEEEccccCCcCCCccCh---HHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDP---LKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~---~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      ++|+||||||+......+.++   +..++.|+.++    +.+++.|.+.+.++||++||.+.+.           +.++.
T Consensus        99 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~~  167 (260)
T 3gem_A           99 SLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRK-----------GSSKH  167 (260)
T ss_dssp             CCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGT-----------CCSSC
T ss_pred             CCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC-----------CCCCc
Confidence            899999999986544422222   23556676664    4467777777789999999988773           45567


Q ss_pred             ChHHHHHHHHHHHHHHhhhcC--CCcEEEEeccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKNS--DMAVMILRLVVFFTL  253 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e~--g~~~~~vrp~~v~~~  253 (267)
                      ..|++||++++.+++.++.|+  ++++++|+||+|.+.
T Consensus       168 ~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~  205 (260)
T 3gem_A          168 IAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQ  205 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC-
T ss_pred             HhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccC
Confidence            899999999999999999983  599999999988764

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.96  E-value=1.4e-28  Score=208.62  Aligned_cols=174  Identities=15%  Similarity=0.121  Sum_probs=136.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||++|||+++|++|+++|++|++++|..++.+.+.+..+++...+.++.++.+|++|.+++++++++     +
T Consensus        11 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   90 (262)
T 3ksu_A           11 NKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFG   90 (262)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            49999999999999999999999999999999866665566665556555567899999999999999998875     6


Q ss_pred             CCCEEEEccccCCcCCCccCh----HHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~  218 (267)
                      ++|+||||||+.......+.+    +..++.|+.++..++..+.+.  +.++||++||.+.+.           +.+...
T Consensus        91 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~-----------~~~~~~  159 (262)
T 3ksu_A           91 KVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAA-----------YTGFYS  159 (262)
T ss_dssp             SEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHH-----------HHCCCC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhcc-----------CCCCCc
Confidence            899999999987655433333    344567888877777776653  457999999987764           344577


Q ss_pred             hHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          219 PYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       219 ~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .|++||++.+.+++.++.|   .|+++++|+||+|.|..
T Consensus       160 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  198 (262)
T 3ksu_A          160 TYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSF  198 (262)
T ss_dssp             C-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcc
Confidence            8999999999999999998   48999999999988754

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.96  E-value=1.9e-28  Score=211.83  Aligned_cols=173  Identities=17%  Similarity=0.200  Sum_probs=146.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      |+||||||+|+||++++++|+++  |++|++++|+....    + +.      .+++++.+|++|.++++++++..++|+
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----~-~~------~~~~~~~~D~~d~~~~~~~~~~~~~d~   71 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNT----D-VV------NSGPFEVVNALDFNQIEHLVEVHKITD   71 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSC----H-HH------HSSCEEECCTTCHHHHHHHHHHTTCCE
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccc----c-cc------CCCceEEecCCCHHHHHHHHhhcCCCE
Confidence            78999999999999999999999  89999999754331    1 11      146788999999999999998667999


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCC-CCCCCCCCCCCCCChHHHHHHHH
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPE-KMPITEETPQAPINPYGKAKKMA  227 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~-~~~~~e~~~~~~~~~Y~~sK~a~  227 (267)
                      |||+||.... ....++++.++.|+.++.++++++.+.+.++||++||.++|+... ..+.+|+.+..+.+.|+.+|.++
T Consensus        72 vih~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~  150 (312)
T 2yy7_A           72 IYLMAALLSA-TAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAG  150 (312)
T ss_dssp             EEECCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHH
T ss_pred             EEECCccCCC-chhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHH
Confidence            9999997532 123566788899999999999999998888999999999998643 35677888888899999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEeccccccccceeecCCC
Q 024488          228 EDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       228 e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      |.+++.++++++++++++||+       ++|||+.
T Consensus       151 e~~~~~~~~~~~~~~~~lrp~-------~v~g~~~  178 (312)
T 2yy7_A          151 ERWCEYYHNIYGVDVRSIRYP-------GLISWST  178 (312)
T ss_dssp             HHHHHHHHHHHCCEEECEEEC-------EEECSSS
T ss_pred             HHHHHHHHHhcCCcEEEEeCC-------eEecCCC
Confidence            999999988889999999999       9999753

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.96  E-value=7e-28  Score=204.02  Aligned_cols=169  Identities=14%  Similarity=0.153  Sum_probs=134.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+.   +...+..+++   ...+.++.+|++|.+++++++++     +
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   80 (260)
T 1nff_A            7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILD---EEGKAMAAEL---ADAARYVHLDVTQPAQWKAAVDTAVTAFG   80 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHh---hcCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999999743   2232322332   12478899999999999988875     5


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+....+..+    ..+..++.|+.++    +.+++.|.+++.++||++||.+.+.           +.++
T Consensus        81 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  149 (260)
T 1nff_A           81 GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA-----------GTVA  149 (260)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcC-----------CCCC
Confidence            8999999999865443322    3344566777775    5678888888888999999988873           3445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ...|+.||++.+.+++.++.|   .|+++++|+||+|+|...
T Consensus       150 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  191 (260)
T 1nff_A          150 CHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMT  191 (260)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGG
T ss_pred             chhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCcc
Confidence            679999999999999999987   689999999998877553

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.96  E-value=3e-28  Score=208.97  Aligned_cols=173  Identities=20%  Similarity=0.186  Sum_probs=133.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcch----hhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc--
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGA----VKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--  143 (267)
                      +|++|||||++|||++++++|+++|++|++++|+....+++    .+..+++...+.++.++.+|++|.+++++++++  
T Consensus         9 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   88 (285)
T 3sc4_A            9 GKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTV   88 (285)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            39999999999999999999999999999999876543332    222233322356899999999999999998876  


Q ss_pred             ---CCCCEEEEccccCCcCCCccChHH----HHHHhHHHHHHH----HHHHHHcCCCEEEEEeccccccCCCCCCCCCCC
Q 024488          144 ---NAFDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       144 ---~~~D~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~~----l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                         +++|+||||||+.......+.+.+    .++.|+.++..+    ++.|++++.++||++||.+.+.           
T Consensus        89 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------  157 (285)
T 3sc4_A           89 EQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLE-----------  157 (285)
T ss_dssp             HHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCS-----------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhcc-----------
Confidence               689999999998765554444433    445777775554    4455555778999999977652           


Q ss_pred             CC-CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecc-ccccc
Q 024488          213 PQ-APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLV-VFFTL  253 (267)
Q Consensus       213 ~~-~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~-~v~~~  253 (267)
                      +. ++...|++||++++.+++.++.|   .|+++++|+|| ++.|.
T Consensus       158 ~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~  203 (285)
T 3sc4_A          158 PKWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATA  203 (285)
T ss_dssp             GGGSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCH
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccH
Confidence            22 45688999999999999999998   68999999999 56663

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.96  E-value=2.7e-28  Score=208.25  Aligned_cols=170  Identities=13%  Similarity=0.117  Sum_probs=128.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhc---CCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQEL---FPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +|++|||||+||||++++++|+++|++|++++|+..   .+.+..+++   ...+.++.++.+|++|.++++++++.   
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            6 EKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAE---RLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            389999999999999999999999999999997543   232222222   22345788999999999999988875   


Q ss_pred             --CCCCEEEEccccCCcCCC--------ccChHHHHHHhHHHHH----HHHHHHHHcCCCEEEEEecccc-ccCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYVGES--------TLDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCAT-YGEPEKMPI  208 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~~~~--------~~~~~~~~~~~~~~~~----~~l~~~~~~~~~~iV~vSS~~~-~g~~~~~~~  208 (267)
                        +++|+||||||+....+.        .+..+..++.|+.++.    .++|.|.+++ ++||++||.+. +.       
T Consensus        83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~-------  154 (278)
T 1spx_A           83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLH-------  154 (278)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSS-------
T ss_pred             HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEeccccccc-------
Confidence              589999999998644332        2233445667777654    4566666656 89999999877 53       


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          209 TEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                          +.++...|+.||++++.+++.++.|   +|+++++|+||+|.|..
T Consensus       155 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  199 (278)
T 1spx_A          155 ----ATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGF  199 (278)
T ss_dssp             ----CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCcc
Confidence                4455778999999999999999987   68999999999887754

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.96  E-value=4.5e-28  Score=211.53  Aligned_cols=174  Identities=18%  Similarity=0.164  Sum_probs=133.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC--CCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR--GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +|++|||||+||||+++|++|+++|++|++++|+..  +.+.+.+..+.....+.++.++.+|++|.+++++++++    
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~   84 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGE   84 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            389999999999999999999999999999987532  22222222222222245789999999999999998875    


Q ss_pred             -CCCCEEEEccccCCcCCCccC----hHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYVGESTLD----PLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                       +++|+||||||+....+.++.    .+..++.|+.++    +.++|.|++++.++||++||.+.+..          +.
T Consensus        85 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~----------~~  154 (324)
T 3u9l_A           85 DGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGG----------TP  154 (324)
T ss_dssp             HSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------CC
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccC----------CC
Confidence             689999999998755443333    334557777774    44677778888899999999887631          23


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      +....|++||++++.++++++.|   +|+++++|+||.|.|.
T Consensus       155 ~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~  196 (324)
T 3u9l_A          155 PYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSG  196 (324)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccC
Confidence            44678999999999999999998   6999999999987653

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.96  E-value=5.9e-28  Score=204.85  Aligned_cols=163  Identities=23%  Similarity=0.313  Sum_probs=141.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      ||+||||||+|+||++++++|+++|++|++++|+.....            ..+++++.+|++|.+++.++++  ++|+|
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~--~~d~v   67 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA------------EAHEEIVACDLADAQAVHDLVK--DCDGI   67 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC------------CTTEEECCCCTTCHHHHHHHHT--TCSEE
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc------------CCCccEEEccCCCHHHHHHHHc--CCCEE
Confidence            479999999999999999999999999999997543210            1257889999999999999998  79999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCC-CCCCCCCCCCCCCCChHHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP-EKMPITEETPQAPINPYGKAKKMAE  228 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~-~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (267)
                      |||||..    .....+..++.|+.++.++++++.+.+.++||++||.++|+.. ...+++|+.+..+.+.|+.+|+++|
T Consensus        68 i~~a~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e  143 (267)
T 3ay3_A           68 IHLGGVS----VERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGE  143 (267)
T ss_dssp             EECCSCC----SCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHH
T ss_pred             EECCcCC----CCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Confidence            9999975    2345577889999999999999999888999999999999763 3567899999889999999999999


Q ss_pred             HHHHHhhhcCCCcEEEEecccc
Q 024488          229 DIILDFSKNSDMAVMILRLVVF  250 (267)
Q Consensus       229 ~l~~~~a~e~g~~~~~vrp~~v  250 (267)
                      .+++.++++++++++++||+.|
T Consensus       144 ~~~~~~~~~~gi~~~~lrp~~v  165 (267)
T 3ay3_A          144 DLASLYYHKFDIETLNIRIGSC  165 (267)
T ss_dssp             HHHHHHHHTTCCCEEEEEECBC
T ss_pred             HHHHHHHHHcCCCEEEEeceee
Confidence            9999998889999999999944

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.96  E-value=5.1e-28  Score=204.32  Aligned_cols=170  Identities=22%  Similarity=0.208  Sum_probs=132.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |++|||||+||||++++++|+++|++|++++|+..   ...+..+++...+.++.++.+|++|.+++++++++     ++
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDA---TAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            89999999999999999999999999999997543   22222233222245788999999999999988875     58


Q ss_pred             CCEEEEccccCCcCCCcc----ChHHHHHHhHHHH----HHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTL----DPLKYYHNITSNT----LVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      +|+||||||+....+..+    ..+..++.|+.++    +.+++.|.+++ .++||++||.+.+.           +.++
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  148 (256)
T 1geg_A           80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV-----------GNPE  148 (256)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------CCTT
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcC-----------CCCC
Confidence            999999999865443332    2234556676664    45777777776 68999999987652           3445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       149 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  189 (256)
T 1geg_A          149 LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM  189 (256)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccch
Confidence            779999999999999999987   58999999999888754

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.96  E-value=1.1e-27  Score=204.23  Aligned_cols=169  Identities=16%  Similarity=0.193  Sum_probs=132.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |++|||||+||||++++++|+++|++|++++|+.   +.+.+..+++... .++.++.+|++|.++++++++.     ++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~---~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   97 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRRE---ERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEFAT   97 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGGSS
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            8999999999999999999999999999999643   3333333333222 4788999999999999999876     57


Q ss_pred             CCEEEEccccCCc-CCCc----cChHHHHHHhHHH----HHHHHHHHHHcCCC-EEEEEeccccccCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYV-GEST----LDPLKYYHNITSN----TLVVLESMARHGVD-TLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       146 ~D~li~~Ag~~~~-~~~~----~~~~~~~~~~~~~----~~~~l~~~~~~~~~-~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +|+||||||+... .+..    +..+..++.|+.+    ++.+++.|.+++.+ +||++||.+.+.           +.+
T Consensus        98 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~-----------~~~  166 (272)
T 2nwq_A           98 LRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKW-----------PYP  166 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTS-----------CCT
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhcc-----------CCC
Confidence            8999999998643 3322    2334456667766    55678888887778 999999988763           445


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       167 ~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~  208 (272)
T 2nwq_A          167 GSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEF  208 (272)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcc
Confidence            5789999999999999999988   58999999999888865

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.96  E-value=3.2e-28  Score=203.20  Aligned_cols=168  Identities=16%  Similarity=0.126  Sum_probs=129.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+.   +.+.+..+++   +.++.++.+|++|.++++++++.     +
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   76 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRY---QRLQQQELLL---GNAVIGIVADLAHHEDVDVAFAAAVEWGG   76 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHH---GGGEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHh---cCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            48999999999999999999999999999999643   3333333333   23588999999999999988875     6


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+....+..    +..+..++.|+.++    +.++|.|.+++ ++||++||.+.+.           +.+.
T Consensus        77 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~-----------~~~~  144 (235)
T 3l6e_A           77 LPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQV-----------GKAN  144 (235)
T ss_dssp             SCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCS-----------SCSS
T ss_pred             CCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcC-----------CCCC
Confidence            899999999986544332    33345566777775    45666666555 4999999987763           4455


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ...|++||++.+.+++.++.|   .|+++++|+||+|.|.+.
T Consensus       145 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  186 (235)
T 3l6e_A          145 ESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFW  186 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcch
Confidence            789999999999999999998   579999999998888654

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.96  E-value=2.9e-28  Score=207.96  Aligned_cols=177  Identities=15%  Similarity=0.104  Sum_probs=134.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcch----hhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc--
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGA----VKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--  143 (267)
                      +|++|||||++|||+++|++|+++|++|++++|+....++.    .+..+++...+.++.++.+|++|.+++++++++  
T Consensus         6 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   85 (274)
T 3e03_A            6 GKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATV   85 (274)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence            39999999999999999999999999999999876543332    222222222356789999999999999998876  


Q ss_pred             ---CCCCEEEEccccCCcCCCccCh----HHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCC
Q 024488          144 ---NAFDAVMHFAAVAYVGESTLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       144 ---~~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                         +++|+||||||+.......+.+    +..++.|+.+    ++.++|.|++++.++||++||.+.+...         
T Consensus        86 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------  156 (274)
T 3e03_A           86 DTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA---------  156 (274)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH---------
T ss_pred             HHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC---------
Confidence               6899999999987555444333    3445567666    4456777777778999999997765210         


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecc-ccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLV-VFFTLVA  255 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~-~v~~~~~  255 (267)
                      +.++...|+.||++++.+++.++.|   .|+++++|+|| ++.|...
T Consensus       157 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~  203 (274)
T 3e03_A          157 WWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI  203 (274)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC---
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchh
Confidence            0344678999999999999999988   58999999999 5777554

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.96  E-value=6.8e-28  Score=203.93  Aligned_cols=171  Identities=20%  Similarity=0.197  Sum_probs=133.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+..   ...+..+++...+.++.++.+|++|.++++++++.     +
T Consensus        14 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   90 (260)
T 2zat_A           14 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQE---NVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHG   90 (260)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            399999999999999999999999999999997543   23333333322345788999999999999988875     6


Q ss_pred             CCCEEEEccccCCc-CCCc----cChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYV-GEST----LDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~-~~~~----~~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||+... .+..    +..+..++.|+.++    +.++|.|.+++.++||++||.+.+.           +.+
T Consensus        91 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  159 (260)
T 2zat_A           91 GVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYH-----------PFP  159 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------CCT
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcC-----------CCC
Confidence            89999999997531 2222    22344566777765    4566777777788999999988874           445


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...|+.||++.+.+++.++.|   .|+++++++||+|.|.+
T Consensus       160 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  201 (260)
T 2zat_A          160 NLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNF  201 (260)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSST
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCcc
Confidence            6789999999999999999988   48999999999888754

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.96  E-value=4e-28  Score=207.34  Aligned_cols=172  Identities=16%  Similarity=0.099  Sum_probs=133.3

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      .+|++|||||+||||++++++|+++|++|++++|+....++..+.+.+.  .+.++.++.+|++|.+++++++++     
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGA--TGRRCLPLSMDVRAPPAVMAAVDQALKEF  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH--HSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--cCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3499999999999999999999999999999997543322222222221  145789999999999999988876     


Q ss_pred             CCCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +++|+||||||+....+..+    ..+..++.|+.++..    +++.|.+.+.++||++||.+.+.           +.+
T Consensus       104 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  172 (277)
T 4fc7_A          104 GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNR-----------GQA  172 (277)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHH-----------TCT
T ss_pred             CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC-----------CCC
Confidence            68999999999765444332    334455667777544    55556666678999999988763           445


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      ....|+.||++++.+++.++.|   .|+++++|+||+|.|.
T Consensus       173 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~  213 (277)
T 4fc7_A          173 LQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGT  213 (277)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSS
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecc
Confidence            5789999999999999999998   5899999999977763

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.96  E-value=2.6e-28  Score=208.88  Aligned_cols=173  Identities=18%  Similarity=0.160  Sum_probs=128.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||+++|++|+++|++|+++++  ++.+...+..+++...+.++.++++|++|.++++++++.     +
T Consensus        29 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           29 RPVAIVTGGRRGIGLGIARALAASGFDIAITGI--GDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES--CCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeC--CCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            489999999999999999999999999999985  233334444444433456899999999999999988875     6


Q ss_pred             CCCEEEEccccC--CcCCCc----cChHHHHHHhHHHH----HHHHHHHHHcC---CCEEEEEeccccccCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVA--YVGEST----LDPLKYYHNITSNT----LVVLESMARHG---VDTLIYSSTCATYGEPEKMPITEE  211 (267)
Q Consensus       145 ~~D~li~~Ag~~--~~~~~~----~~~~~~~~~~~~~~----~~~l~~~~~~~---~~~iV~vSS~~~~g~~~~~~~~e~  211 (267)
                      ++|+||||||+.  ...+..    ++.+..++.|+.++    +.++|.|.+++   .++||++||.+.+.          
T Consensus       107 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~----------  176 (280)
T 4da9_A          107 RIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVM----------  176 (280)
T ss_dssp             CCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC--------------
T ss_pred             CCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhcc----------
Confidence            899999999983  222322    23344455677774    45777777765   67999999987763          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                       +.++...|++||++++.+++.++.|   .|+++++|+||+|.|...
T Consensus       177 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  222 (280)
T 4da9_A          177 -TSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMT  222 (280)
T ss_dssp             ----CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCch
Confidence             4556789999999999999999988   689999999998888554

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.96  E-value=1.3e-28  Score=213.55  Aligned_cols=174  Identities=28%  Similarity=0.398  Sum_probs=142.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|+||||||||+||++++++|+++|++|++++|+........+.+.+.. ....++++.+|++            ++|+|
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~------------~~d~v   73 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFL-EKPVLELEERDLS------------DVRLV   73 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEE-CSCGGGCCHHHHT------------TEEEE
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhc-cCCCeeEEeCccc------------cCCEE
Confidence            4899999999999999999999999999999986542111111122211 1234566666665            68999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (267)
                      ||+||..........+...++ |+.++.++++++.+.+.++||++||.++|+.....+++|+.+..+.+.|+.+|.++|.
T Consensus        74 i~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  152 (321)
T 3vps_A           74 YHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEM  152 (321)
T ss_dssp             EECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             EECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHH
Confidence            999997654334455566777 9999999999999999899999999999998888899999999999999999999999


Q ss_pred             HHHHhhhcCCC-cEEEEeccccccccceeecCCCCC
Q 024488          230 IILDFSKNSDM-AVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       230 l~~~~a~e~g~-~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      +++.+++++++ +++++||+       ++|||+...
T Consensus       153 ~~~~~~~~~~~~~~~ilRp~-------~v~G~~~~~  181 (321)
T 3vps_A          153 VAGAHQRASVAPEVGIVRFF-------NVYGPGERP  181 (321)
T ss_dssp             HHHHHHHSSSSCEEEEEEEC-------EEECTTCCT
T ss_pred             HHHHHHHHcCCCceEEEEec-------cccCcCCCC
Confidence            99999999999 99999999       999998764

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.96  E-value=2.3e-28  Score=213.76  Aligned_cols=181  Identities=21%  Similarity=0.254  Sum_probs=142.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEE-EccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFI-YADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +|+||||||+||||++++++|+++|++|++++|+....+.+.+.+.+..  +.+++++ .+|++|.++++++++  ++|+
T Consensus        11 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~--~~d~   86 (342)
T 1y1p_A           11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY--PGRFETAVVEDMLKQGAYDEVIK--GAAG   86 (342)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS--TTTEEEEECSCTTSTTTTTTTTT--TCSE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC--CCceEEEEecCCcChHHHHHHHc--CCCE
Confidence            4899999999999999999999999999999975432222222221111  2468888 899999999988887  8999


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHH-cCCCEEEEEeccccccCCC----CCCCCCCC-----------
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR-HGVDTLIYSSTCATYGEPE----KMPITEET-----------  212 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~iV~vSS~~~~g~~~----~~~~~e~~-----------  212 (267)
                      |||+||.....   .++++.++.|+.++.++++++.+ .+.++||++||.++|+...    +.+++|+.           
T Consensus        87 vih~A~~~~~~---~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  163 (342)
T 1y1p_A           87 VAHIASVVSFS---NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKT  163 (342)
T ss_dssp             EEECCCCCSCC---SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHH
T ss_pred             EEEeCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcc
Confidence            99999976432   46778899999999999999985 5678999999999986432    14566765           


Q ss_pred             -----CCCCCChHHHHHHHHHHHHHHhhhcC--CCcEEEEeccccccccceeecCCCCC
Q 024488          213 -----PQAPINPYGKAKKMAEDIILDFSKNS--DMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       213 -----~~~~~~~Y~~sK~a~e~l~~~~a~e~--g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                           +..+.+.|+.||+++|.+++.+++++  +++++++||+       ++|||+...
T Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~-------~v~g~~~~~  215 (342)
T 1y1p_A          164 LPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPN-------YTIGTIFDP  215 (342)
T ss_dssp             SCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEES-------EEECCCSCT
T ss_pred             ccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCC-------ceECCCCCC
Confidence                 23356789999999999999998874  7899999999       899987543

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.96  E-value=1.3e-27  Score=205.55  Aligned_cols=173  Identities=17%  Similarity=0.192  Sum_probs=136.3

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      .+|++|||||+||||++++++|+++|++|++++|+...  ...+..+.....+.++.++.+|++|.+++++++++     
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  123 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEG--DANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL  123 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH--HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            34999999999999999999999999999999974321  11222222223356899999999999999988875     


Q ss_pred             CCCCEEEEccccCCcC-C----CccChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVG-E----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~-~----~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      +++|+||||||..... .    ..++.+..++.|+.++..++..+...  ..++||++||.+.+.           +.+.
T Consensus       124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  192 (291)
T 3ijr_A          124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYE-----------GNET  192 (291)
T ss_dssp             SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHH-----------CCTT
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcC-----------CCCC
Confidence            6899999999976432 2    23344566778888888887777654  357999999988874           4455


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       193 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  233 (291)
T 3ijr_A          193 LIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPL  233 (291)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCc
Confidence            789999999999999999998   48999999999887754

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.96  E-value=1.3e-27  Score=204.19  Aligned_cols=170  Identities=19%  Similarity=0.159  Sum_probs=133.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+.   +.+.+..+++...+ ++.++.+|++|.+++++++++     +
T Consensus        29 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~---~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (276)
T 2b4q_A           29 GRIALVTGGSRGIGQMIAQGLLEAGARVFICARDA---EACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELSA  104 (276)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCH---HHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            48999999999999999999999999999999643   33333334443323 788899999999999988875     6


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHH----HHHHHHHHHcCC----CEEEEEeccccccCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNT----LVVLESMARHGV----DTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~~----~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                      ++|+||||||+....+..+    ..+..++.|+.++    +.++|.|++++.    ++||++||.+.+.           
T Consensus       105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~-----------  173 (276)
T 2b4q_A          105 RLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGIS-----------  173 (276)
T ss_dssp             CCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTC-----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcC-----------
Confidence            8999999999865443322    3345566777775    557777777665    8999999988773           


Q ss_pred             CCCCCC-hHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          213 PQAPIN-PYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       213 ~~~~~~-~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +.+... .|+.||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       174 ~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~  219 (276)
T 2b4q_A          174 AMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRM  219 (276)
T ss_dssp             CCCCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTT
T ss_pred             CCCCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcc
Confidence            333455 8999999999999999987   58999999999888754

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.96  E-value=6.3e-28  Score=205.69  Aligned_cols=170  Identities=16%  Similarity=0.160  Sum_probs=133.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      .+|++|||||+||||++++++|+++|++|++++|+   .+.+.+..+++   +.++.++.+|++|.+++++++++     
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  100 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRR---LDALQETAAEI---GDDALCVPTDVTDPDSVRALFTATVEKF  100 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence            34899999999999999999999999999999964   33444444444   35788999999999999998875     


Q ss_pred             CCCCEEEEccccCCc-CCCc----cChHHHHHHhHHH----HHHHHHHHHHcC--CCEEEEEeccccccCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYV-GEST----LDPLKYYHNITSN----TLVVLESMARHG--VDTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~-~~~~----~~~~~~~~~~~~~----~~~~l~~~~~~~--~~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                      +++|+||||||+... .+..    +..+..++.|+.+    ++.++|.|.+++  .++||++||.+.+.           
T Consensus       101 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~-----------  169 (272)
T 4dyv_A          101 GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS-----------  169 (272)
T ss_dssp             SCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS-----------
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC-----------
Confidence            689999999998643 2222    2334456677777    556777887765  57999999988763           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      +.++...|++||++++.++++++.|   .|+++++|+||+|.|...
T Consensus       170 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  215 (272)
T 4dyv_A          170 PRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMA  215 (272)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC----
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhh
Confidence            5566789999999999999999988   689999999998888553

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.96  E-value=1.4e-27  Score=200.77  Aligned_cols=167  Identities=19%  Similarity=0.199  Sum_probs=130.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+++||||+||||++++++|+++|++|++++|+.   +.+.+..+++   +.++.++.+|++|.++++++++.     ++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   74 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQ---ERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWCN   74 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHTSCTTTCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            5899999999999999999999999999999643   3333333333   24688999999999999999875     58


Q ss_pred             CCEEEEccccCC-cCCCc----cChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAY-VGEST----LDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       146 ~D~li~~Ag~~~-~~~~~----~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      +|+||||||+.. ..+..    ++.+..++.|+.+    ++.++|.|.+++.++||++||.+.+.           +.++
T Consensus        75 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~  143 (248)
T 3asu_A           75 IDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW-----------PYAG  143 (248)
T ss_dssp             CCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------CCTT
T ss_pred             CCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhcc-----------CCCC
Confidence            999999999753 22222    2334456677666    45577777777789999999988763           4456


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccc-ccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFF-TLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~-~~~  254 (267)
                      ...|+.||++.+.+++.++.|   .|+++++|+||+|. |..
T Consensus       144 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~  185 (248)
T 3asu_A          144 GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEF  185 (248)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC---
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcc
Confidence            789999999999999999988   48999999999888 654

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.96  E-value=9.8e-28  Score=210.20  Aligned_cols=175  Identities=24%  Similarity=0.366  Sum_probs=147.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-------CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhh
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS-------YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS  142 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~  142 (267)
                      +|+||||||+||||++++++|+++|       ++|++++|.......         ....++.++.+|++|.++++++++
T Consensus        14 ~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~~~~   84 (342)
T 2hrz_A           14 GMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA---------GFSGAVDARAADLSAPGEAEKLVE   84 (342)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT---------TCCSEEEEEECCTTSTTHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc---------ccCCceeEEEcCCCCHHHHHHHHh
Confidence            3899999999999999999999999       899999975432211         113468899999999999999885


Q ss_pred             cCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC-----CCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          143 ENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-----VDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       143 ~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                       .++|+|||+||.... ...+++++.++.|+.++.++++++.+.+     .++||++||.++|+.....+++|+.+..+.
T Consensus        85 -~~~d~vih~A~~~~~-~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~  162 (342)
T 2hrz_A           85 -ARPDVIFHLAAIVSG-EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPL  162 (342)
T ss_dssp             -TCCSEEEECCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCS
T ss_pred             -cCCCEEEECCccCcc-cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCc
Confidence             379999999997532 1234567788999999999999998775     689999999999987656688999998899


Q ss_pred             ChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeec-CCC
Q 024488          218 NPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIK-INP  262 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~G-p~~  262 (267)
                      +.|+.||+++|.+++.++++.+++.+++|++       ++|| |+.
T Consensus       163 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~-------~v~g~pg~  201 (342)
T 2hrz_A          163 TSYGTQKAICELLLSDYSRRGFFDGIGIRLP-------TICIRPGK  201 (342)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTTSCEEEEEEEC-------EETTCCSS
T ss_pred             chHHHHHHHHHHHHHHHHHhcCCCceeEEee-------eEEecCCC
Confidence            9999999999999999998889999999999       7777 654

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.96  E-value=4.7e-28  Score=204.98  Aligned_cols=174  Identities=13%  Similarity=0.173  Sum_probs=134.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~  145 (267)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+++.. .+.++.++.+|++|++++++++++    .+
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (260)
T 2z1n_A            7 GKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLV-SGAQVDIVAGDIREPGDIDRLFEKARDLGG   85 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS-TTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            3899999999999999999999999999999975432222222222110 122688999999999999988874    23


Q ss_pred             CCEEEEccccCCcCCCcc----ChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTL----DPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|+||||||+....+..+    ..+..++.|+.++    +.++|.|.+++.++||++||.+.+.           +.++.
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  154 (260)
T 2z1n_A           86 ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLR-----------PWQDL  154 (260)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTTB
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcC-----------CCCCC
Confidence            999999999765433222    3344566777764    6678888888889999999988873           44557


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ..|+.||++.+.+++.++.|   .|+++++|+||+|.|...
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  195 (260)
T 2z1n_A          155 ALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRV  195 (260)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCC
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchh
Confidence            89999999999999999988   489999999998887553

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.96  E-value=9.4e-28  Score=201.65  Aligned_cols=170  Identities=15%  Similarity=0.077  Sum_probs=129.8

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CCCC
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFD  147 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D  147 (267)
                      .+|+||||||+||||++++++|+++|++|++++|+.   +.+.+..+++   ...+.++.+|++|.+++++++++ +++|
T Consensus        13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id   86 (249)
T 3f9i_A           13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNE---EKLKSLGNAL---KDNYTIEVCNLANKEECSNLISKTSNLD   86 (249)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH---HHHHHHHHHh---ccCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence            349999999999999999999999999999999643   3333333333   24688899999999999999987 5899


Q ss_pred             EEEEccccCCcCC----CccChHHHHHHhHHHHH----HHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCCh
Q 024488          148 AVMHFAAVAYVGE----STLDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (267)
Q Consensus       148 ~li~~Ag~~~~~~----~~~~~~~~~~~~~~~~~----~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~  219 (267)
                      +||||||+.....    ..++.+..++.|+.++.    .+++.|.+.+.++||++||.+.+.           +.++...
T Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~  155 (249)
T 3f9i_A           87 ILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIA-----------GNPGQAN  155 (249)
T ss_dssp             EEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC-------------CCSCSHH
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhcc-----------CCCCCch
Confidence            9999999865432    34456677888888744    456777777788999999988773           4556789


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          220 YGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       220 Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      |+.||++.+.+++.++.|   .|+++++++||+|.|...
T Consensus       156 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  194 (249)
T 3f9i_A          156 YCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMT  194 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC----
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcc
Confidence            999999999999999987   589999999998877543

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.96  E-value=7.3e-28  Score=204.83  Aligned_cols=174  Identities=13%  Similarity=0.084  Sum_probs=137.3

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      .+|+++||||+||||++++++|+++|++|+++++  ++.+...+..++....+.++.++.+|++|.++++++++.     
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHS--ERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEEC--SCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC--CchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3489999999999999999999999999999985  223333333334434456899999999999999988876     


Q ss_pred             CCCCEEEEccccCCcCCCcc----ChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +++|+||||||+.......+    +.+..++.|+.++    +.+++.|.+.+.++||++||.+.+.           +.+
T Consensus       102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  170 (269)
T 3gk3_A          102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSR-----------GAF  170 (269)
T ss_dssp             SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------CCT
T ss_pred             CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhcc-----------CCC
Confidence            68999999999875544332    3344556677664    4466777777788999999987763           455


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      +...|++||++.+.+++.++.|   .|+++++|+||+|.|...
T Consensus       171 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  213 (269)
T 3gk3_A          171 GQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMV  213 (269)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTT
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhh
Confidence            6789999999999999999988   589999999998888654

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.96  E-value=1.3e-27  Score=201.85  Aligned_cols=165  Identities=19%  Similarity=0.194  Sum_probs=130.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+...    .+..+++.    . .++++|++|.++++++++.     +
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~g   76 (256)
T 2d1y_A            6 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG----KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYALG   76 (256)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH----HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH----HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999975432    22223331    3 7889999999999988875     6


Q ss_pred             CCCEEEEccccCCcCCCccCh----HHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+....+..+.+    +..++.|+.++..    ++|.|++++.++||++||.+.+.           +.++
T Consensus        77 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~  145 (256)
T 2d1y_A           77 RVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF-----------AEQE  145 (256)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS-----------BCTT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccC-----------CCCC
Confidence            899999999986554433322    4456677777544    56677777778999999987762           3455


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++.+.+++.++.|   .|+++++++||+|.|..
T Consensus       146 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  186 (256)
T 2d1y_A          146 NAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA  186 (256)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCch
Confidence            779999999999999999988   58999999999888754

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.96  E-value=2.4e-27  Score=207.41  Aligned_cols=168  Identities=24%  Similarity=0.300  Sum_probs=137.8

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      .||+||||||+||||++++++|+++|++|++++|......   +.+.++    .+++++.+|++|.++++++++..++|+
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~l~~~----~~~~~~~~Dl~d~~~~~~~~~~~~~D~   92 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRR---EHLKDH----PNLTFVEGSIADHALVNQLIGDLQPDA   92 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGSCCC----TTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccch---hhHhhc----CCceEEEEeCCCHHHHHHHHhccCCcE
Confidence            3589999999999999999999999999999997543221   111111    368899999999999999998545999


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEecccccc----CCCCCCCCCCCCCCCC-ChHHHH
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG----EPEKMPITEETPQAPI-NPYGKA  223 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g----~~~~~~~~e~~~~~~~-~~Y~~s  223 (267)
                      ||||||..... ...+++  ++.|+.++.++++++.+.+.++||++||.++|+    .... +++|+.  .+. +.|+.+
T Consensus        93 vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~--~p~~~~Y~~s  166 (333)
T 2q1w_A           93 VVHTAASYKDP-DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR--NPANSSYAIS  166 (333)
T ss_dssp             EEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC--CCTTCHHHHH
T ss_pred             EEECceecCCC-ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC--CCCCCchHHH
Confidence            99999976443 222333  889999999999999998889999999999998    5444 777776  556 899999


Q ss_pred             HHHHHHHHHH-hhhcCCCcEEEEeccccccccceeecCC
Q 024488          224 KKMAEDIILD-FSKNSDMAVMILRLVVFFTLVAFVIKIN  261 (267)
Q Consensus       224 K~a~e~l~~~-~a~e~g~~~~~vrp~~v~~~~~~~~Gp~  261 (267)
                      |+++|.+++. ++     +++++||+       ++|||+
T Consensus       167 K~~~E~~~~~s~~-----~~~ilR~~-------~v~gp~  193 (333)
T 2q1w_A          167 KSANEDYLEYSGL-----DFVTFRLA-------NVVGPR  193 (333)
T ss_dssp             HHHHHHHHHHHTC-----CEEEEEES-------EEESTT
T ss_pred             HHHHHHHHHhhhC-----CeEEEeec-------eEECcC
Confidence            9999999998 75     78999999       999998

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.96  E-value=8.6e-28  Score=209.34  Aligned_cols=173  Identities=14%  Similarity=0.093  Sum_probs=133.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+||||||+||||++++++|+++|++|++++|+....++..+.++.. ..+..+.++.+|++|.++++++++.     +
T Consensus         8 ~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            8 GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAE-GSGPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             TCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-TCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            489999999999999999999999999999997544333333333322 1123789999999999999998875     6


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHHHHH----HHHHHHHc------CCCEEEEEeccccccCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLV----VLESMARH------GVDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~----~l~~~~~~------~~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                      ++|+||||||+....+..    +..+..++.|+.++.+    +++.|.++      +.++||++||.+.+.         
T Consensus        87 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~---------  157 (319)
T 3ioy_A           87 PVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL---------  157 (319)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTC---------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccccc---------
Confidence            899999999986554433    3344566777777544    66666664      468999999988874         


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                        +.+....|++||++++.+++.++.|   .|+++++|+||+|.|.+
T Consensus       158 --~~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  202 (319)
T 3ioy_A          158 --AAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYI  202 (319)
T ss_dssp             --CCSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC---
T ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCc
Confidence              4455789999999999999999887   58999999999888754

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.96  E-value=1.8e-27  Score=200.51  Aligned_cols=172  Identities=16%  Similarity=0.145  Sum_probs=133.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccC--CCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL--GDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~~~v~~~~~~----  143 (267)
                      +|++|||||+||||+++|++|+++|++|++++|+....++..+.+.+..  +.++.++.+|+  +|.++++++++.    
T Consensus        12 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           12 DRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET--GRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc--CCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            4999999999999999999999999999999975433333333332221  23678899999  999999888875    


Q ss_pred             -CCCCEEEEccccCCc-CCCccCh----HHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYV-GESTLDP----LKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~-~~~~~~~----~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                       +++|+||||||+... .+..+..    +..++.|+.++    +.++|.|++++.++||++||.+.+.           +
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~  158 (252)
T 3f1l_A           90 YPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQ-----------G  158 (252)
T ss_dssp             CSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTS-----------C
T ss_pred             CCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhcc-----------C
Confidence             689999999998532 2322222    34456676664    4567777888889999999988763           4


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhcCC--CcEEEEecccccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKNSD--MAVMILRLVVFFTLV  254 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e~g--~~~~~vrp~~v~~~~  254 (267)
                      .++...|++||++.+.+++.++.|++  +++++|+||+|.|..
T Consensus       159 ~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~  201 (252)
T 3f1l_A          159 RANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM  201 (252)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch
Confidence            55678999999999999999999853  899999999998854

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.96  E-value=7.1e-28  Score=203.14  Aligned_cols=167  Identities=16%  Similarity=0.201  Sum_probs=132.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+.   +...+..+++   +.++.++++|++|.++++++++.     +
T Consensus         6 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (253)
T 1hxh_A            6 GKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINE---AAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRLG   79 (253)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCH---HHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999998643   3333333333   34788999999999999988875     6


Q ss_pred             CCCEEEEccccCCcCCCccC----hHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLD----PLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~----~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+....+..+.    .+..++.|+.+    ++.++|.|.+++ ++||++||.+.+.           +.++
T Consensus        80 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~-----------~~~~  147 (253)
T 1hxh_A           80 TLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWL-----------PIEQ  147 (253)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTS-----------CCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcC-----------CCCC
Confidence            89999999998654433332    33445566554    556788887777 8999999988873           4456


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---C--CCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---S--DMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~--g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++.+.+++.++.|   .  |+++++|+||+|+|..
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~  190 (253)
T 1hxh_A          148 YAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM  190 (253)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCch
Confidence            779999999999999999987   3  8999999999777744

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.95  E-value=1.2e-27  Score=202.26  Aligned_cols=173  Identities=16%  Similarity=0.085  Sum_probs=131.4

Q ss_pred             CcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +|++|||||+|  |||+++|++|+++|++|++++|+.+..+++.+.+++..  +.++.++++|++|++++++++++    
T Consensus         6 gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (256)
T 4fs3_A            6 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN--QPEAHLYQIDVQSDEEVINGFEQIGKD   83 (256)
T ss_dssp             TCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT--CSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            49999999876  99999999999999999999986655555555555442  34788999999999999988876    


Q ss_pred             -CCCCEEEEccccCCcC----CCccChHHHHH----HhHHHHHHHHHHHHH--cCCCEEEEEeccccccCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYVG----ESTLDPLKYYH----NITSNTLVVLESMAR--HGVDTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~----~~~~~~~~~~~----~~~~~~~~~l~~~~~--~~~~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                       +++|+||||||+....    ...+...+.|+    .|..+...+...+..  .+.++||++||.+..           .
T Consensus        84 ~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~-----------~  152 (256)
T 4fs3_A           84 VGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGE-----------F  152 (256)
T ss_dssp             HCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGT-----------S
T ss_pred             hCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccc-----------c
Confidence             8999999999975432    22233333333    333333333333222  235799999997775           2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      +.+....|++||++++.|+++++.|   +|+++++|.||+|.|...
T Consensus       153 ~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~  198 (256)
T 4fs3_A          153 AVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSA  198 (256)
T ss_dssp             CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGG
T ss_pred             CcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhh
Confidence            5566889999999999999999998   689999999999888553

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.95  E-value=1.4e-27  Score=203.43  Aligned_cols=173  Identities=21%  Similarity=0.173  Sum_probs=134.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||+++|++|+++|++|+++++.  +.+...+..+++...+.++.++.+|++|.+++++++++     +
T Consensus        31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (271)
T 3v2g_A           31 GKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVN--AAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG  108 (271)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC--CHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4999999999999999999999999999999753  22333333333333356889999999999999998876     6


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~  218 (267)
                      ++|+||||||+....+..+    +.+..++.|+.++..++..+.+.  ..++||++||.....          .+.++..
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~----------~~~~~~~  178 (271)
T 3v2g_A          109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAEL----------VPWPGIS  178 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTC----------CCSTTCH
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhcc----------CCCCCch
Confidence            8999999999875544333    33445667777776666665543  367999999965531          1345678


Q ss_pred             hHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          219 PYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       219 ~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       179 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~  217 (271)
T 3v2g_A          179 LYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDM  217 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSS
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCc
Confidence            9999999999999999988   48999999999888755

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.95  E-value=3.9e-28  Score=204.43  Aligned_cols=169  Identities=19%  Similarity=0.188  Sum_probs=121.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+||||||+||||+++|++|+++|++|++++|+..   ...+..+++...+.++.++.+|++|++++++++++     +
T Consensus         9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T 3qiv_A            9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAE---AAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFG   85 (253)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHH---HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            399999999999999999999999999999996543   33333333333356789999999999999998876     5


Q ss_pred             CCCEEEEccccCC---cCC----CccChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAY---VGE----STLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       145 ~~D~li~~Ag~~~---~~~----~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                      ++|+||||||+..   ...    ..+..+..++.|+.+    ++.+++.|.+++.++||++||.+.+.            
T Consensus        86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------  153 (253)
T 3qiv_A           86 GIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL------------  153 (253)
T ss_dssp             CCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------
T ss_pred             CCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC------------
Confidence            8999999999832   222    223334566778877    66788888888889999999988762            


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhcC---CCcEEEEeccccccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKNS---DMAVMILRLVVFFTLVA  255 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e~---g~~~~~vrp~~v~~~~~  255 (267)
                        +...|++||++.+.+++.++.|+   |+++++++||+|.|...
T Consensus       154 --~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  196 (253)
T 3qiv_A          154 --YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEAN  196 (253)
T ss_dssp             --------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------
T ss_pred             --CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccch
Confidence              25679999999999999999984   79999999997777543

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.95  E-value=6.1e-28  Score=207.28  Aligned_cols=173  Identities=16%  Similarity=0.184  Sum_probs=136.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC---eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY---RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +|++|||||+||||+++|++|+++|+   +|++++|+....+++.+.+++.. .+.++.++.+|++|.+++++++++   
T Consensus        33 ~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           33 KKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEF-PNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHC-TTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhC-CCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            39999999999999999999999998   99999975433333333333221 245789999999999999999886   


Q ss_pred             --CCCCEEEEccccCC-cCCCc----cChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAY-VGEST----LDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       144 --~~~D~li~~Ag~~~-~~~~~----~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                        +++|+||||||+.. .....    ++.+..++.|+.+    ++.++|.|++++.++||++||.+.+.           
T Consensus       112 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~-----------  180 (287)
T 3rku_A          112 EFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRD-----------  180 (287)
T ss_dssp             GGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------
T ss_pred             hcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcC-----------
Confidence              58999999999864 22222    2334456667766    45567777888889999999988763           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +.++...|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       181 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~  225 (287)
T 3rku_A          181 AYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEF  225 (287)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcc
Confidence            4556789999999999999999998   68999999999888754

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.95  E-value=8.1e-28  Score=201.88  Aligned_cols=171  Identities=16%  Similarity=0.115  Sum_probs=133.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhc-CCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQEL-FPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      +|+++||||+||||++++++|+++|++|++++|+..   ...+..+++ ...+.++.++.+|++|.+++++++++     
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAE---TLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQF   78 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            389999999999999999999999999999997532   233323333 22245789999999999999988875     


Q ss_pred             CCCCEEEEccccCCcCC---C----ccChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGE---S----TLDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~---~----~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                      +++|+||||||......   .    .++.+..++.|+.++    +.+++.|.+++.++||++||.+.+.           
T Consensus        79 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------  147 (250)
T 2cfc_A           79 GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLV-----------  147 (250)
T ss_dssp             SCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------
T ss_pred             CCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc-----------
Confidence            58999999999864332   2    223345566777665    5577778777888999999988763           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhcC---CCcEEEEecccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKNS---DMAVMILRLVVFFTLV  254 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e~---g~~~~~vrp~~v~~~~  254 (267)
                      +.++...|+.||++.+.+++.++.|+   |+++++++||+|+|..
T Consensus       148 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  192 (250)
T 2cfc_A          148 AFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPM  192 (250)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTT
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCc
Confidence            34567899999999999999999874   8999999999666643

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.95  E-value=1.2e-27  Score=203.65  Aligned_cols=173  Identities=19%  Similarity=0.170  Sum_probs=134.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||++|||++++++|+++|++|++++++  +.+...+..+++...+.++.++.+|++|.+++++++++     +
T Consensus        18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   95 (270)
T 3is3_A           18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYAN--STKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG   95 (270)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC--CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4999999999999999999999999999998853  22333333333333456899999999999999998876     6


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~  218 (267)
                      ++|+||||||+.......    ++.+..++.|+.++..++..+.+.  ..++||++||.+...          .+.++..
T Consensus        96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~----------~~~~~~~  165 (270)
T 3is3_A           96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD----------FSVPKHS  165 (270)
T ss_dssp             CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTT----------CCCTTCH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhcc----------CCCCCCc
Confidence            899999999987554433    333455677877766666555443  256999999976321          2455678


Q ss_pred             hHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          219 PYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       219 ~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .|+.||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       166 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~  204 (270)
T 3is3_A          166 LYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDM  204 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTT
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChh
Confidence            9999999999999999998   58999999999888754

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.95  E-value=1.1e-27  Score=204.68  Aligned_cols=171  Identities=17%  Similarity=0.133  Sum_probs=132.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+..   ...+..+++...+.++.++.+|++|.+++++++++     +
T Consensus        22 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           22 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEE---GLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   98 (277)
T ss_dssp             SCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            489999999999999999999999999999997543   23222233322245788999999999999988875     5


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHHHHHH------HHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLVVLES------MARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~~l~~------~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      ++|+||||||+.......+    ..+..++.|+.++..++..      |.+++.++||++||.+.+.           +.
T Consensus        99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~  167 (277)
T 2rhc_B           99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ-----------GV  167 (277)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTS-----------CC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECcccccc-----------CC
Confidence            8999999999865443332    2344567777776555444      5555678999999987762           34


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ++...|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       168 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  210 (277)
T 2rhc_B          168 VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPM  210 (277)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCch
Confidence            55789999999999999999987   58999999999888753

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.95  E-value=5.4e-28  Score=204.18  Aligned_cols=168  Identities=14%  Similarity=0.164  Sum_probs=134.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+.   +.+.+..+++   +.++.++.+|++|.++++++++.     +
T Consensus         8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (255)
T 4eso_A            8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNE---SNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTLG   81 (255)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence            49999999999999999999999999999999643   3333333333   35789999999999999988875     6


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~  218 (267)
                      ++|+||||||+....+..    ++.+..++.|+.++..++..+.+.  ..++||++||.+.+.           +.++..
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~  150 (255)
T 4eso_A           82 AIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEG-----------GHPGMS  150 (255)
T ss_dssp             SEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSS-----------BCTTBH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcC-----------CCCCch
Confidence            899999999987654433    333455677888877777766543  247999999988873           455678


Q ss_pred             hHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          219 PYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       219 ~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .|++||++.+.+++.++.|   .|+++++|+||+|.|..
T Consensus       151 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~  189 (255)
T 4eso_A          151 VYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPT  189 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcc
Confidence            9999999999999999998   48999999999777754

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.95  E-value=5.7e-28  Score=211.40  Aligned_cols=183  Identities=21%  Similarity=0.231  Sum_probs=138.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|+||||||+||||++++++|+++|++|+++.|+....++.. .+.++.....+++++.+|++|.++++++++  ++|+|
T Consensus         5 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~V   81 (337)
T 2c29_D            5 SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVK-HLLDLPKAETHLTLWKADLADEGSFDEAIK--GCTGV   81 (337)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHH-HHHTSTTHHHHEEEEECCTTSTTTTHHHHT--TCSEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHH-HHHhcccCCCeEEEEEcCCCCHHHHHHHHc--CCCEE
Confidence            489999999999999999999999999999887543221111 111111101257889999999999999988  78999


Q ss_pred             EEccccCCcCCCccChH-HHHHHhHHHHHHHHHHHHHcC-CCEEEEEecccc-ccCCC-CCCCCCCCCC---------CC
Q 024488          150 MHFAAVAYVGESTLDPL-KYYHNITSNTLVVLESMARHG-VDTLIYSSTCAT-YGEPE-KMPITEETPQ---------AP  216 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~-~~~iV~vSS~~~-~g~~~-~~~~~e~~~~---------~~  216 (267)
                      ||+|+...  ....++. +.++.|+.++.++++++.+.+ .++||++||.++ |+... ..+++|+.+.         ++
T Consensus        82 ih~A~~~~--~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  159 (337)
T 2c29_D           82 FHVATPMD--FESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMT  159 (337)
T ss_dssp             EECCCCCC--SSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCT
T ss_pred             EEeccccC--CCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCc
Confidence            99998642  1223333 578899999999999999877 789999999874 44322 2335565432         13


Q ss_pred             CChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          217 INPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      ...|+.||.++|.+++.+++++|++++++||+       ++|||+...
T Consensus       160 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~-------~v~Gp~~~~  200 (337)
T 2c29_D          160 AWMYFVSKTLAEQAAWKYAKENNIDFITIIPT-------LVVGPFIMS  200 (337)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTCCEEEEEEC-------EEESCCSCS
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCcEEEEeCC-------ceECCCCCC
Confidence            45799999999999999987789999999999       999997543

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.95  E-value=4.1e-28  Score=207.65  Aligned_cols=158  Identities=21%  Similarity=0.259  Sum_probs=140.2

Q ss_pred             Cc-EEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VT-HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k-~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      || +||||||+|+||++++++|+++|++|++++|                        .++|++|.+++.++++..++|+
T Consensus         4 M~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r------------------------~~~D~~d~~~~~~~~~~~~~d~   59 (287)
T 3sc6_A            4 MKERVIITGANGQLGKQLQEELNPEEYDIYPFDK------------------------KLLDITNISQVQQVVQEIRPHI   59 (287)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECT------------------------TTSCTTCHHHHHHHHHHHCCSE
T ss_pred             ceeEEEEECCCCHHHHHHHHHHHhCCCEEEEecc------------------------cccCCCCHHHHHHHHHhcCCCE
Confidence            45 9999999999999999999999999999986                        1379999999999998656999


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (267)
                      |||+||.......+.+++..++.|+.++.++++++.+.+. +||++||.++|+.....+++|+.+..|.+.|+.+|.++|
T Consensus        60 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E  138 (287)
T 3sc6_A           60 IIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGE  138 (287)
T ss_dssp             EEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHH
T ss_pred             EEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence            9999998755444567888999999999999999998876 899999999999888889999999999999999999999


Q ss_pred             HHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          229 DIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       229 ~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      .+++.++.    +++++||+       ++|||+..
T Consensus       139 ~~~~~~~~----~~~ilR~~-------~v~G~~~~  162 (287)
T 3sc6_A          139 QFVKELHN----KYFIVRTS-------WLYGKYGN  162 (287)
T ss_dssp             HHHHHHCS----SEEEEEEC-------SEECSSSC
T ss_pred             HHHHHhCC----CcEEEeee-------eecCCCCC
Confidence            99999754    67999999       99998753

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.95  E-value=2.3e-27  Score=201.27  Aligned_cols=160  Identities=13%  Similarity=0.111  Sum_probs=130.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+...              +.++.++.+|++|.++++++++.     +
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   73 (264)
T 2dtx_A            8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG--------------EAKYDHIECDVTNPDQVKASIDHIFKEYG   73 (264)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC--------------SCSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc--------------CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4899999999999999999999999999999975422              23678899999999999988875     6


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+.......+    ..+..++.|+.+    ++.+++.|.+++.++||++||.+.+.           +.++
T Consensus        74 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  142 (264)
T 2dtx_A           74 SISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASI-----------ITKN  142 (264)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTS-----------CCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhcc-----------CCCC
Confidence            8999999999865443332    334456677777    44566667667778999999988873           4456


Q ss_pred             CChHHHHHHHHHHHHHHhhhcCC--CcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKNSD--MAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e~g--~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++++.+++.++.|++  +++++|+||+|.|..
T Consensus       143 ~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~  182 (264)
T 2dtx_A          143 ASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPL  182 (264)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcc
Confidence            78999999999999999998843  999999999888754

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.95  E-value=1.5e-27  Score=205.09  Aligned_cols=182  Identities=13%  Similarity=0.096  Sum_probs=144.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CCCC
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFD  147 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D  147 (267)
                      .+|+|+||||+||||++++++|+++|++|++++|+.   ++..+..+++   +.++.++.+|++|.+++++++++ +++|
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~~~iD   88 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDT---RKGEAAARTM---AGQVEVRELDLQDLSSVRRFADGVSGAD   88 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHTTS---SSEEEEEECCTTCHHHHHHHHHTCCCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhcCCCC
Confidence            349999999999999999999999999999999643   3333333333   45789999999999999999987 5899


Q ss_pred             EEEEccccCCcC--CCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccC-CCCCCC-CCCCCCCCCChHHHH
Q 024488          148 AVMHFAAVAYVG--ESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGE-PEKMPI-TEETPQAPINPYGKA  223 (267)
Q Consensus       148 ~li~~Ag~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~-~~~~~~-~e~~~~~~~~~Y~~s  223 (267)
                      +||||||+..+.  ...+..+..++.|+.++..++..+.+...++||++||.+.+.. ....+. .+..+.++...|++|
T Consensus        89 ~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  168 (291)
T 3rd5_A           89 VLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQS  168 (291)
T ss_dssp             EEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHH
T ss_pred             EEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHH
Confidence            999999986433  2345667889999999999999988776679999999888743 222222 223455667799999


Q ss_pred             HHHHHHHHHHhhhc---CC--CcEEEEeccccccccce
Q 024488          224 KKMAEDIILDFSKN---SD--MAVMILRLVVFFTLVAF  256 (267)
Q Consensus       224 K~a~e~l~~~~a~e---~g--~~~~~vrp~~v~~~~~~  256 (267)
                      |++.+.+++.+++|   .|  +++++|+||+|.|.+..
T Consensus       169 K~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~  206 (291)
T 3rd5_A          169 KLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQG  206 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--
T ss_pred             HHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccccc
Confidence            99999999999988   35  99999999999886543

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.95  E-value=6.6e-28  Score=205.00  Aligned_cols=172  Identities=22%  Similarity=0.165  Sum_probs=132.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||+++|++|+++|++|+++++  ++.+...+..+++...+.++.++.+|++|.+++++++++     +
T Consensus        27 ~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           27 NKVAIVTGASRGIGAAIAARLASDGFTVVINYA--GKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEES--SCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcC--CCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            499999999999999999999999999999864  223333333333333356789999999999999998876     6


Q ss_pred             CCCEEEEccccCCcCCCccChH----HHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPL----KYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~  218 (267)
                      ++|+||||||+.......+.+.    ..++.|+.++..++..+.+.  ..++||++||.+.+.           +.+...
T Consensus       105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~  173 (267)
T 3u5t_A          105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGL-----------LHPSYG  173 (267)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHH-----------CCTTCH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhcc-----------CCCCch
Confidence            8999999999876554444333    34557887776666655443  247999999987763           445678


Q ss_pred             hHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          219 PYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       219 ~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .|++||++++.++++++.|   .|+++++|+||+|.|..
T Consensus       174 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  212 (267)
T 3u5t_A          174 IYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDL  212 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC---
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcc
Confidence            9999999999999999998   48999999999888754

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=2.2e-27  Score=203.05  Aligned_cols=170  Identities=15%  Similarity=0.093  Sum_probs=131.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCC---ceEEEEccCCCHHHHHHHhhc---
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG---RLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +|++|||||+||||++++++|+++|++|++++|+..   .+.+..+++...+.   ++.++.+|++|.+++++++++   
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            6 NKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSE---RLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            489999999999999999999999999999997543   33333333322233   688999999999999988875   


Q ss_pred             --CCCCEEEEccccCCcCC----Ccc----ChHHHHHHhHHHHH----HHHHHHHHcCCCEEEEEeccccccCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYVGE----STL----DPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPIT  209 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~~~----~~~----~~~~~~~~~~~~~~----~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~  209 (267)
                        +++|+||||||+....+    ..+    ..+..++.|+.++.    .+++.|.+++ ++||++||.+.+.        
T Consensus        83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~--------  153 (280)
T 1xkq_A           83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGP--------  153 (280)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSS--------
T ss_pred             hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccC--------
Confidence              68999999999864433    222    23445566766644    4566666666 8999999988763        


Q ss_pred             CCCCC-CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          210 EETPQ-APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       210 e~~~~-~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                         +. ++...|++||++.+.+++.++.|   +|+++++|+||+|.|..
T Consensus       154 ---~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  199 (280)
T 1xkq_A          154 ---QAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF  199 (280)
T ss_dssp             ---SCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSH
T ss_pred             ---CCCCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCc
Confidence               23 45779999999999999999977   68999999999887754

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.95  E-value=1.1e-27  Score=203.93  Aligned_cols=173  Identities=14%  Similarity=0.050  Sum_probs=135.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+||||||+||||+++|++|+++|++|++++|+.  .+...+..+++...+.++.++.+|++|.+++++++++     +
T Consensus        29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           29 GKNVLITGASKGIGAEIAKTLASMGLKVWINYRSN--AEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG  106 (271)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            49999999999999999999999999999999732  2222222222223356899999999999999998875     6


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+.......    +..+..++.|+.++    +.+++.|.+.+.++||++||.+.+.           +.++
T Consensus       107 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  175 (271)
T 4iin_A          107 GLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGER-----------GNMG  175 (271)
T ss_dssp             SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------CCTT
T ss_pred             CCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcC-----------CCCC
Confidence            899999999987654432    23344566676664    4577777777888999999987763           4556


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ...|++||++++.+++.++.|   .++++++|+||+|.|...
T Consensus       176 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  217 (271)
T 4iin_A          176 QTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMN  217 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--
T ss_pred             chHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCch
Confidence            889999999999999999988   689999999998888543

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=1.6e-27  Score=205.65  Aligned_cols=170  Identities=15%  Similarity=0.110  Sum_probs=131.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCC---ceEEEEccCCCHHHHHHHhhc---
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG---RLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +|++|||||+||||++++++|+++|++|++++|+..   .+.+..+++...+.   ++.++.+|++|.+++++++++   
T Consensus        26 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  102 (297)
T 1xhl_A           26 GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNED---RLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA  102 (297)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence            489999999999999999999999999999997543   23232233222233   688999999999999988875   


Q ss_pred             --CCCCEEEEccccCCcCC--Ccc----ChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYVGE--STL----DPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~~~--~~~----~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~  211 (267)
                        +++|+||||||+....+  ..+    ..+..++.|+.++    +.+++.|.+++ ++||++||.+.+.          
T Consensus       103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~----------  171 (297)
T 1xhl_A          103 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGP----------  171 (297)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSS----------
T ss_pred             hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhcc----------
Confidence              68999999999864433  222    2334556676664    44667777666 8999999988763          


Q ss_pred             CCC-CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          212 TPQ-APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       212 ~~~-~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                       +. ++...|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       172 -~~~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~  217 (297)
T 1xhl_A          172 -QAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGF  217 (297)
T ss_dssp             -SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSH
T ss_pred             -CCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcc
Confidence             23 45779999999999999999977   68999999999888754

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.95  E-value=2.7e-27  Score=200.43  Aligned_cols=163  Identities=13%  Similarity=0.104  Sum_probs=130.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+||||||+||||++++++|+++|++|++++|+....+            ..++.++.+|++|++++++++++     +
T Consensus        28 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   95 (260)
T 3un1_A           28 QKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA------------DPDIHTVAGDISKPETADRIVREGIERFG   95 (260)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS------------STTEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc------------cCceEEEEccCCCHHHHHHHHHHHHHHCC
Confidence            489999999999999999999999999999997543211            23688999999999999998875     6


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHH----HHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~----~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+....+..+    ..+..++.|+.++.    .++|.|.+++.++||++||...+..         .+..+
T Consensus        96 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~---------~~~~~  166 (260)
T 3un1_A           96 RIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQP---------MVGMP  166 (260)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSC---------BTTCC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccC---------CCCCc
Confidence            8999999999875544333    33445567777744    4666677888899999999877531         13345


Q ss_pred             CChHHHHHHHHHHHHHHhhhcC---CCcEEEEeccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKNS---DMAVMILRLVVFFTL  253 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e~---g~~~~~vrp~~v~~~  253 (267)
                      ...|+.||++++.+++.++.|+   |+++++|+||+|.|.
T Consensus       167 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~  206 (260)
T 3un1_A          167 SALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTP  206 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCT
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCC
Confidence            6799999999999999999985   899999999966664

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.95  E-value=4.2e-27  Score=199.39  Aligned_cols=168  Identities=15%  Similarity=0.112  Sum_probs=130.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+.   +...+..+++   ..++.++.+|++|.+++++++++     +
T Consensus        12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~D~~d~~~v~~~~~~~~~~~g   85 (263)
T 3ak4_A           12 GRKAIVTGGSKGIGAAIARALDKAGATVAIADLDV---MAAQAVVAGL---ENGGFAVEVDVTKRASVDAAMQKAIDALG   85 (263)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHTC---TTCCEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHH---hcCCeEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999999643   2333333333   12678899999999999988875     5


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHH----HHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTL----VVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~----~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||+....+..+    ..+..++.|+.++.    .+++.|.+++ .++||++||.+.+.           +.+
T Consensus        86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  154 (263)
T 3ak4_A           86 GFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKV-----------GAP  154 (263)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS-----------CCT
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccc-----------CCC
Confidence            8999999999865443333    23345556666644    4566676666 68999999987763           345


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...|+.||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       155 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  196 (263)
T 3ak4_A          155 LLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAM  196 (263)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChh
Confidence            5779999999999999999988   48999999999887753

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.95  E-value=2.3e-27  Score=209.26  Aligned_cols=174  Identities=21%  Similarity=0.312  Sum_probs=146.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---CC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NA  145 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~~  145 (267)
                      +|+||||||+||||++++++|+++| ++|++++|..... . .   ..+.    .+. +.+|++|.+.++++++.   ++
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~-~---~~~~----~~~-~~~d~~~~~~~~~~~~~~~~~~  115 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-K-F---VNLV----DLN-IADYMDKEDFLIQIMAGEEFGD  115 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGG-G-G---GGTT----TSC-CSEEEEHHHHHHHHHTTCCCSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcc-h-h---hccc----Cce-EeeecCcHHHHHHHHhhcccCC
Confidence            3789999999999999999999999 9999999754321 0 1   1111    122 67899999999998874   36


Q ss_pred             CCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHH
Q 024488          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKK  225 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~  225 (267)
                      +|+|||+||....  ...++++.++.|+.++.++++++.+.+. +||++||.++|+.....+++|+.+..+.+.|+.+|.
T Consensus       116 ~d~Vih~A~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~  192 (357)
T 2x6t_A          116 VEAIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKF  192 (357)
T ss_dssp             CCEEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHH
T ss_pred             CCEEEECCcccCC--ccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHH
Confidence            9999999997543  3456788899999999999999999888 999999999998776678899988888999999999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          226 MAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       226 a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      ++|.+++.++++++++++++||+       ++|||+..
T Consensus       193 ~~E~~~~~~~~~~g~~~~ilRp~-------~v~Gp~~~  223 (357)
T 2x6t_A          193 LFDEYVRQILPEANSQIVGFRYF-------NVYGPREG  223 (357)
T ss_dssp             HHHHHHHHHGGGCSSCEEEEEEC-------EEESSSCT
T ss_pred             HHHHHHHHHHHHcCCCEEEEecC-------eEECCCCC
Confidence            99999999999899999999999       99999764

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.95  E-value=2.6e-27  Score=196.79  Aligned_cols=172  Identities=15%  Similarity=0.147  Sum_probs=127.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc--CCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--NAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--~~~D  147 (267)
                      ||+||||||+||||++++++|+++|++|++++|+.   +.+.+..+++   +.++.++.+|++|.+++++++++  ...|
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~d   74 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSE---SKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDSIPS   74 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCH---HHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSSCCS
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhhcCC
Confidence            68999999999999999999999999999999643   3333333333   45788999999999999999986  3459


Q ss_pred             EEEEccccCCcCCCccCh----HHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCCh
Q 024488          148 AVMHFAAVAYVGESTLDP----LKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~  219 (267)
                      +||||||........+.+    +..++.|+.++..    +++.|.+++ ++||++||.+.+.           +.++...
T Consensus        75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~-----------~~~~~~~  142 (230)
T 3guy_A           75 TVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQ-----------PKAQEST  142 (230)
T ss_dssp             EEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTS-----------CCTTCHH
T ss_pred             EEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCC-----------CCCCCch
Confidence            999999987655433333    3455677777555    445554444 4999999988873           4566789


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccceeec
Q 024488          220 YGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVAFVIK  259 (267)
Q Consensus       220 Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~~~~G  259 (267)
                      |++||++.+.+++.++.|   .|++++.|+||.|.|.+..-++
T Consensus       143 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  185 (230)
T 3guy_A          143 YCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG  185 (230)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC---------
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC
Confidence            999999999999999998   4899999999999886654433

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.95  E-value=1.6e-27  Score=206.64  Aligned_cols=168  Identities=24%  Similarity=0.358  Sum_probs=143.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           72 HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +||||||+||||++++++|+++  |++|++++|+....              .++.++.+|++|.+++.++++..++|+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~--------------~~~~~~~~D~~d~~~~~~~~~~~~~d~v   66 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT--------------GGIKFITLDVSNRDEIDRAVEKYSIDAI   66 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC--------------TTCCEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc--------------cCceEEEecCCCHHHHHHHHhhcCCcEE
Confidence            4899999999999999999998  89999999753221              0356789999999999999986679999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCC-CCCCCCCCCCCCCCChHHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP-EKMPITEETPQAPINPYGKAKKMAE  228 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~-~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (267)
                      ||+|+.... ....+++..++.|+.++.++++++.+.+.++||++||.++|+.. ...+.+|+.+..+.+.|+.||.++|
T Consensus        67 ih~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e  145 (317)
T 3ajr_A           67 FHLAGILSA-KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAE  145 (317)
T ss_dssp             EECCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHH
T ss_pred             EECCcccCC-ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHH
Confidence            999997432 12346677889999999999999999888999999999999864 3346778888888999999999999


Q ss_pred             HHHHHhhhcCCCcEEEEeccccccccceeecCC
Q 024488          229 DIILDFSKNSDMAVMILRLVVFFTLVAFVIKIN  261 (267)
Q Consensus       229 ~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~  261 (267)
                      .+++.++++++++++++||+       ++|||+
T Consensus       146 ~~~~~~~~~~~~~~~~lR~~-------~~~g~~  171 (317)
T 3ajr_A          146 LLGQYYYEKFGLDVRSLRYP-------GIISYK  171 (317)
T ss_dssp             HHHHHHHHHHCCEEEEEEEC-------EEECSS
T ss_pred             HHHHHHHHhcCCeEEEEecC-------cEeccC
Confidence            99999988889999999999       888875

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.95  E-value=2.4e-27  Score=208.05  Aligned_cols=177  Identities=28%  Similarity=0.454  Sum_probs=142.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      ..+|+||||||+|+||++++++|+++|++|++++|.......   .++.+. ...++.++.+|+.+..     +.  ++|
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~-~~~~~~~~~~D~~~~~-----~~--~~d   93 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKR---NVEHWI-GHENFELINHDVVEPL-----YI--EVD   93 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GTGGGT-TCTTEEEEECCTTSCC-----CC--CCS
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchh---hhhhhc-cCCceEEEeCccCChh-----hc--CCC
Confidence            445899999999999999999999999999999975433221   122221 1346889999998752     33  799


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCC-----CCCCCCChHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE-----TPQAPINPYGK  222 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~-----~~~~~~~~Y~~  222 (267)
                      +|||+||.........+++..++.|+.++.++++++.+.+. +||++||.++||.....+++|+     .+..+.+.|+.
T Consensus        94 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~  172 (343)
T 2b69_A           94 QIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDE  172 (343)
T ss_dssp             EEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHH
T ss_pred             EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHH
Confidence            99999997643333456778889999999999999998875 9999999999987766677776     45667788999


Q ss_pred             HHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          223 AKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       223 sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      +|.++|.+++.++++.+++++++||+       ++|||+..
T Consensus       173 sK~~~E~~~~~~~~~~~~~~~ilrp~-------~v~G~~~~  206 (343)
T 2b69_A          173 GKRVAETMCYAYMKQEGVEVRVARIF-------NTFGPRMH  206 (343)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEEC-------CEECTTCC
T ss_pred             HHHHHHHHHHHHHHHhCCcEEEEEEc-------ceeCcCCC
Confidence            99999999999998889999999999       99998754

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.95  E-value=4.8e-27  Score=199.29  Aligned_cols=174  Identities=17%  Similarity=0.140  Sum_probs=133.8

Q ss_pred             CCCcEEEEEcCCC-hhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           68 EGVTHVLVTGGAG-YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        68 ~~~k~vlVTGasg-gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      ..+|++|||||+| |||++++++|+++|++|++++|+....++..+.+++.  .+.++.++.+|++|.+++++++++   
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL--GLGRVEAVVCDVTSTEAVDALITQTVE   97 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--CSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc--CCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            3349999999986 8999999999999999999997543333333333222  235799999999999999998876   


Q ss_pred             --CCCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHH----HHHHHHHHc-CCCEEEEEeccccccCCCCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTL----VVLESMARH-GVDTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~----~~l~~~~~~-~~~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                        +++|+||||||+.......+    ..+..++.|+.++.    .+++.|.+. +.++||++||.+.+.           
T Consensus        98 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------  166 (266)
T 3o38_A           98 KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR-----------  166 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC-----------
T ss_pred             HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC-----------
Confidence              68999999999865544333    23345566766644    456666665 567999999988763           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +.++...|+.||++.+.+++.++.|   .|+++++|+||+|.|..
T Consensus       167 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  211 (266)
T 3o38_A          167 AQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKF  211 (266)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchh
Confidence            5566889999999999999999988   68999999999888754

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.95  E-value=2.6e-27  Score=202.81  Aligned_cols=172  Identities=17%  Similarity=0.155  Sum_probs=133.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+...  ...+..+++...+.++.++.+|++|.+++++++++     +
T Consensus        29 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  106 (283)
T 1g0o_A           29 GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTE--SAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG  106 (283)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH--HHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4999999999999999999999999999999974321  12222222222345788999999999999988875     6


Q ss_pred             CCCEEEEccccCCcCCC----ccChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCC-CC
Q 024488          145 AFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQA-PI  217 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~-~~  217 (267)
                      ++|+||||||+......    .+..+..++.|+.++..++..+.+.  +.++||++||.+.+.           +.. +.
T Consensus       107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~  175 (283)
T 1g0o_A          107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQA-----------KAVPKH  175 (283)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTC-----------SSCSSC
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhcc-----------CCCCCC
Confidence            89999999998654332    2334456778888887777776654  568999999987752           222 37


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..|+.||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       176 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  215 (283)
T 1g0o_A          176 AVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDM  215 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred             cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchh
Confidence            78999999999999999987   58999999999888754

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.95  E-value=9.4e-28  Score=205.54  Aligned_cols=173  Identities=17%  Similarity=0.132  Sum_probs=132.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||+++|++|+++|++|++++|+....++..+.+.+..  +..+.++.+|++|.+++++++++     +
T Consensus        33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  110 (281)
T 4dry_A           33 GRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT--GNIVRAVVCDVGDPDQVAALFAAVRAEFA  110 (281)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4999999999999999999999999999999975433333333332221  22358899999999999998876     6


Q ss_pred             CCCEEEEccccCCc-CCCc----cChHHHHHHhHHH----HHHHHHHHHHcC--CCEEEEEeccccccCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYV-GEST----LDPLKYYHNITSN----TLVVLESMARHG--VDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       145 ~~D~li~~Ag~~~~-~~~~----~~~~~~~~~~~~~----~~~~l~~~~~~~--~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                      ++|+||||||+... ....    ++.+..++.|+.+    ++.+++.|.+++  .++||++||.+.+.           +
T Consensus       111 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~-----------~  179 (281)
T 4dry_A          111 RLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQT-----------P  179 (281)
T ss_dssp             CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTC-----------C
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCC-----------C
Confidence            89999999998643 2222    2333456667766    556778887765  68999999988763           5


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      .++...|++||++++.+++.++.|   .|+++++|+||+|.|...
T Consensus       180 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  224 (281)
T 4dry_A          180 RPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMT  224 (281)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC---
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhh
Confidence            566889999999999999999988   689999999999988654

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.95  E-value=2.6e-27  Score=200.74  Aligned_cols=171  Identities=12%  Similarity=0.050  Sum_probs=123.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc------
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (267)
                      +|+||||||+||||++++++|+++|++|++++|+..   ...+..+++...+.++.++.+|++|.++++++++.      
T Consensus        14 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   90 (266)
T 1xq1_A           14 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEY---ELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG   90 (266)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            389999999999999999999999999999997533   23332333322245788999999999999988865      


Q ss_pred             CCCCEEEEccccCCcCCCc----cChHHHHHHhHHHHHHH----HHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~~----l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +++|+||||||........    +..+..++.|+.++.++    ++.|.+.+.++||++||.+.+.           +.+
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~  159 (266)
T 1xq1_A           91 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV-----------SAS  159 (266)
T ss_dssp             TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------------
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcc-----------CCC
Confidence            6899999999986443322    23344567788776655    5555677789999999988763           345


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...|+.||++.+.+++.++.+   .|+++++|+||+|+|..
T Consensus       160 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  201 (266)
T 1xq1_A          160 VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPL  201 (266)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccch
Confidence            5789999999999999999988   48999999999777644

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=3.7e-27  Score=197.81  Aligned_cols=165  Identities=15%  Similarity=0.112  Sum_probs=129.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+.   +.+.+..+++     .+.++.+|++|.++++++++.     +
T Consensus         5 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~g   76 (245)
T 1uls_A            5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIEE---GPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHLG   76 (245)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHc-----CCEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999999643   2333322222     278899999999999988875     6


Q ss_pred             CCCEEEEccccCCcCCCccC----hHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLD----PLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~----~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+.......+.    .+..++.|+.++..    +++.|.+++.++||++||.+.+            +.++
T Consensus        77 ~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~------------~~~~  144 (245)
T 1uls_A           77 RLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYL------------GNLG  144 (245)
T ss_dssp             SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGG------------CCTT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhc------------CCCC
Confidence            89999999998654433332    33455677777544    5666766677899999998844            3345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++.+.+++.++.|   .|+++++|+||+|.|..
T Consensus       145 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  185 (245)
T 1uls_A          145 QANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRM  185 (245)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcc
Confidence            779999999999999999987   58999999999888754

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.95  E-value=7.1e-28  Score=208.01  Aligned_cols=168  Identities=19%  Similarity=0.171  Sum_probs=141.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      ||+||||||+|+||++++++|+++|+      +  ....            ...+..+.+|++|.+++.++++..++|+|
T Consensus         6 ~~~vlVtGatG~iG~~l~~~L~~~g~------~--~~~~------------~~~~~~~~~D~~d~~~~~~~~~~~~~d~V   65 (319)
T 4b8w_A            6 SMRILVTGGSGLVGKAIQKVVADGAG------L--PGED------------WVFVSSKDADLTDTAQTRALFEKVQPTHV   65 (319)
T ss_dssp             CCEEEEETCSSHHHHHHHHHHHTTTC------C--TTCE------------EEECCTTTCCTTSHHHHHHHHHHSCCSEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhcCC------c--cccc------------ccccCceecccCCHHHHHHHHhhcCCCEE
Confidence            58999999999999999999999998      1  1000            01234457899999999999986669999


Q ss_pred             EEccccCCc-CCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCC----CCCCCC-hHHHH
Q 024488          150 MHFAAVAYV-GESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET----PQAPIN-PYGKA  223 (267)
Q Consensus       150 i~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~----~~~~~~-~Y~~s  223 (267)
                      ||+|+.... .....++.+.++.|+.++.++++++.+.+.++||++||.++||.....+++|+.    +..+.. .|+.+
T Consensus        66 ih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~s  145 (319)
T 4b8w_A           66 IHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYA  145 (319)
T ss_dssp             EECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHH
T ss_pred             EECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHH
Confidence            999997531 123467778899999999999999999998999999999999988778888886    555555 69999


Q ss_pred             HHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          224 KKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       224 K~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      |.++|.+++.++++.+++++++||+       ++|||+...
T Consensus       146 K~~~E~~~~~~~~~~~~~~~ilRp~-------~v~Gp~~~~  179 (319)
T 4b8w_A          146 KRMIDVQNRAYFQQYGCTFTAVIPT-------NVFGPHDNF  179 (319)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEEC-------EEECTTCCC
T ss_pred             HHHHHHHHHHHHHhhCCCEEEEeec-------cccCCCCCC
Confidence            9999999999999899999999999       999998753

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.95  E-value=3.9e-27  Score=197.11  Aligned_cols=170  Identities=16%  Similarity=0.164  Sum_probs=132.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-------eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE  143 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~  143 (267)
                      |+||||||+||||++++++|+++|+       +|++++|+..   ...+..+++...+.++.++.+|++|.++++++++.
T Consensus         3 k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   79 (244)
T 2bd0_A            3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAA---DLEKISLECRAEGALTDTITADISDMADVRRLTTH   79 (244)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHH---HHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHH---HHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHH
Confidence            8999999999999999999999999       9999996432   33333333323355789999999999999988875


Q ss_pred             -----CCCCEEEEccccCCcCCC----ccChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCC
Q 024488          144 -----NAFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       144 -----~~~D~li~~Ag~~~~~~~----~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                           +++|+||||||.......    .+..+..++.|+.++..    +++.|.+.+.++||++||.+.+.         
T Consensus        80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~---------  150 (244)
T 2bd0_A           80 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK---------  150 (244)
T ss_dssp             HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS---------
T ss_pred             HHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcC---------
Confidence                 589999999998654332    23344556777777544    55566667778999999988874         


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                        +.++...|+.||++++.+++.++.+   .|+++++++||+|+|..
T Consensus       151 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  195 (244)
T 2bd0_A          151 --AFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPM  195 (244)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTT
T ss_pred             --CCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchh
Confidence              4556789999999999999999876   68999999999666543

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.95  E-value=2.8e-27  Score=226.15  Aligned_cols=184  Identities=41%  Similarity=0.664  Sum_probs=150.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|+||||||+|+||++++++|+++|++|++++|.........+.++.+.  ..+++++.+|++|.++++++++..++|+|
T Consensus        11 ~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~~~D~V   88 (699)
T 1z45_A           11 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT--KHHIPFYEVDLCDRKGLEKVFKEYKIDSV   88 (699)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH--TSCCCEEECCTTCHHHHHHHHHHSCCCEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc--CCceEEEEcCCCCHHHHHHHHHhCCCCEE
Confidence            4899999999999999999999999999999976543322222222221  24678899999999999999876579999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCC----CCCCCCCCCCCCCChHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPE----KMPITEETPQAPINPYGKAKK  225 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~----~~~~~e~~~~~~~~~Y~~sK~  225 (267)
                      ||+||..........+++.++.|+.++.++++++.+.+.++||++||.++|+...    ..+++|+.+..+.+.|+.||+
T Consensus        89 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~  168 (699)
T 1z45_A           89 IHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKY  168 (699)
T ss_dssp             EECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHH
T ss_pred             EECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHH
Confidence            9999976433234456778899999999999999998889999999999997532    246788888888899999999


Q ss_pred             HHHHHHHHhhhc--CCCcEEEEeccccccccceeecCCC
Q 024488          226 MAEDIILDFSKN--SDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       226 a~e~l~~~~a~e--~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      ++|.+++.++.+  .+++++++||+       ++|||++
T Consensus       169 ~~E~~~~~~~~~~~~g~~~~ilR~~-------~vyG~~~  200 (699)
T 1z45_A          169 AIENILNDLYNSDKKSWKFAILRYF-------NPIGAHP  200 (699)
T ss_dssp             HHHHHHHHHHHHSTTSCEEEEEEEC-------EEECCCT
T ss_pred             HHHHHHHHHHHhccCCCcEEEEEec-------cccCCCc
Confidence            999999999877  79999999999       7777753

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.95  E-value=2.5e-27  Score=200.73  Aligned_cols=173  Identities=16%  Similarity=0.168  Sum_probs=131.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhh-cCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQE-LFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      ||+++||||+||||++++++|+++|++|++++|+..   +..+.+.+ ....+.++.++.+|++|.+++++++++     
T Consensus         7 ~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   83 (264)
T 3i4f_A            7 VRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDT---TAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF   83 (264)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH---HHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCCh---HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            489999999999999999999999999999986432   22222222 222245789999999999999998876     


Q ss_pred             CCCCEEEEcccc--CCcCCCc----cChHHHHHHhHHHHH----HHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAV--AYVGEST----LDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       144 ~~~D~li~~Ag~--~~~~~~~----~~~~~~~~~~~~~~~----~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                      +++|+||||||+  .......    +..+..++.|+.++.    .++|.|.+++.++||++||.+.++.         .+
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~---------~~  154 (264)
T 3i4f_A           84 GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSA---------PG  154 (264)
T ss_dssp             SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGC---------CC
T ss_pred             CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhccc---------CC
Confidence            589999999994  2222222    233455677777744    4666678888899999999755421         13


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .++...|++||++.+.+++.++.|   .|+++++|+||+|.|..
T Consensus       155 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  198 (264)
T 3i4f_A          155 WIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEM  198 (264)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGG
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCcc
Confidence            456789999999999999999988   68999999999777644

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=3.9e-27  Score=197.75  Aligned_cols=165  Identities=15%  Similarity=0.087  Sum_probs=128.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (267)
                      +|+++||||+||||++++++|+++|++|++++|+.   +++.+.. ++    .++.++.+|++|.++++++.+. +++|+
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~-~~----~~~~~~~~D~~~~~~~~~~~~~~~~id~   77 (246)
T 2ag5_A            6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDINE---SKLQELE-KY----PGIQTRVLDVTKKKQIDQFANEVERLDV   77 (246)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHGGGG-GS----TTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHH-hc----cCceEEEeeCCCHHHHHHHHHHhCCCCE
Confidence            38999999999999999999999999999999643   2222221 22    2688899999999999987765 68999


Q ss_pred             EEEccccCCcCCCccCh----HHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC-CCCh
Q 024488          149 VMHFAAVAYVGESTLDP----LKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA-PINP  219 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~----~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~-~~~~  219 (267)
                      ||||||+....+..+..    +..++.|+.++    +.++|.|.+++.++||++||.+.+.           +.+ +...
T Consensus        78 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~~  146 (246)
T 2ag5_A           78 LFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV-----------KGVVNRCV  146 (246)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT-----------BCCTTBHH
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCc-----------CCCCCCcc
Confidence            99999986544433322    33455666664    4466677777788999999987763           223 5678


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          220 YGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       220 Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      |+.||++.+.+++.++.|   .|+++++|+||+|+|.
T Consensus       147 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  183 (246)
T 2ag5_A          147 YSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTP  183 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCc
Confidence            999999999999999987   4899999999977664

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.95  E-value=3.7e-27  Score=203.08  Aligned_cols=174  Identities=17%  Similarity=0.153  Sum_probs=135.2

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      .+|++|||||+||||++++++|+++|++|++++|... .+...+..+.....+.++.++.+|++|.+++++++++     
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAE-EEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGG-HHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcc-hhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3499999999999999999999999999999986421 1122222222222356789999999999999988875     


Q ss_pred             CCCCEEEEccccCCc-CC----CccChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYV-GE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~-~~----~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      +++|+||||||.... ..    ..+..+..++.|+.++..++..+...  ..++||++||.+.+.           +.+.
T Consensus       127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~-----------~~~~  195 (294)
T 3r3s_A          127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQ-----------PSPH  195 (294)
T ss_dssp             TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTS-----------CCTT
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhcc-----------CCCC
Confidence            689999999998542 22    22334556778888887777776654  246999999998874           4556


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       196 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  236 (294)
T 3r3s_A          196 LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL  236 (294)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccc
Confidence            789999999999999999998   48999999999888754

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.95  E-value=1.4e-27  Score=218.75  Aligned_cols=181  Identities=18%  Similarity=0.260  Sum_probs=148.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhC---CCeEEEEecCCCCCcchhhhhhhcCCC-------------CCceEEEEccC
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKD---SYRVTIVDNLSRGNIGAVKVLQELFPE-------------PGRLQFIYADL  131 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl  131 (267)
                      ..+|+||||||+|+||++++++|+++   |++|++++|+...... .+.+++....             ..+++++.+|+
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDA-RRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHH-HHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHH-HHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            34599999999999999999999999   9999999986543322 2222222111             25799999999


Q ss_pred             C------CHHHHHHHhhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCC
Q 024488          132 G------DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEK  205 (267)
Q Consensus       132 ~------d~~~v~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~  205 (267)
                      +      |.++++++++  ++|+||||||....    ...++.++.|+.++.++++++.+.+.++||++||.++|+....
T Consensus       150 ~~~~~gld~~~~~~~~~--~~D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~  223 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAE--TVDLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEP  223 (478)
T ss_dssp             TSGGGGCCHHHHHHHHH--HCCEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCT
T ss_pred             CCcccCCCHHHHHHHHc--CCCEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCC
Confidence            8      7778999988  79999999998654    3455778899999999999999988889999999999987777


Q ss_pred             CCCCCCCCCCCC-----------ChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCC
Q 024488          206 MPITEETPQAPI-----------NPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       206 ~~~~e~~~~~~~-----------~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      .+++|+.+..+.           +.|+.||.++|.+++.++++.|++++++|||       ++|||+.
T Consensus       224 ~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg-------~v~G~~~  284 (478)
T 4dqv_A          224 SAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCG-------MILADTS  284 (478)
T ss_dssp             TTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEEC-------EEECCSS
T ss_pred             CCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECc-------eeeCCCc
Confidence            778887655433           3499999999999999998889999999999       9999864

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.95  E-value=5e-27  Score=198.17  Aligned_cols=173  Identities=16%  Similarity=0.117  Sum_probs=130.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+|+||||+||||++++++|+++|++|++++|+...   ..+..+++...+.++.++.+|++|.+++++++++     +
T Consensus        13 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (260)
T 3awd_A           13 NRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAM---ATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEG   89 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4899999999999999999999999999999975432   2222222222245789999999999999988875     5


Q ss_pred             CCCEEEEccccCC-cCCCcc----ChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAY-VGESTL----DPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~-~~~~~~----~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||+.. .....+    ..+..++.|+.++.+    +++.|.+.+.++||++||.+.+..         .+..
T Consensus        90 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~---------~~~~  160 (260)
T 3awd_A           90 RVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIV---------NRPQ  160 (260)
T ss_dssp             CCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---------CSSS
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhccc---------CCCC
Confidence            8999999999764 222222    234556777777655    445555667789999999877631         1222


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...|+.||++.+.+++.++.|   .|+++++||||+|++..
T Consensus       161 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~  202 (260)
T 3awd_A          161 QQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTL  202 (260)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred             CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccch
Confidence            3478999999999999999988   79999999999665543

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.95  E-value=1.3e-26  Score=194.98  Aligned_cols=161  Identities=18%  Similarity=0.200  Sum_probs=127.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+...        +   ..  .+.++.+|++|.+++++++++     +
T Consensus         7 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~---~~--~~~~~~~D~~d~~~~~~~~~~~~~~~g   73 (250)
T 2fwm_X            7 GKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------E---QY--PFATEVMDVADAAQVAQVCQRLLAETE   73 (250)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------S---CC--SSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------h---cC--CceEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999975321        1   11  277889999999999998875     5


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+....+..+    +.+..++.|+.++    +.++|.|++++.++||++||.+.+.           +.++
T Consensus        74 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~  142 (250)
T 2fwm_X           74 RLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHT-----------PRIG  142 (250)
T ss_dssp             CCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------CCTT
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC-----------CCCC
Confidence            8999999999865443332    3344556676664    4466677777789999999988863           4556


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++.+.+++.++.|   .|+++++|+||+|.|..
T Consensus       143 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  183 (250)
T 2fwm_X          143 MSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDM  183 (250)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred             CchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcc
Confidence            789999999999999999988   58999999999888754

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.95  E-value=2.2e-27  Score=199.68  Aligned_cols=170  Identities=15%  Similarity=0.145  Sum_probs=133.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+||||||+||||++++++|+++|++|++++|+...   ..+..+++...+.++.++.+|++|+++++++++.     +
T Consensus        11 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   87 (255)
T 1fmc_A           11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADA---ANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG   87 (255)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHH---HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHH---HHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            3899999999999999999999999999999975432   2222233222245788999999999999988874     5


Q ss_pred             CCCEEEEccccCCcCCC---ccChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGES---TLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~---~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      ++|+||||||.......   .+..+..++.|+.++.+    +++.|.+.+.++||++||.+.+.           +.++.
T Consensus        88 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~  156 (255)
T 1fmc_A           88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN-----------KNINM  156 (255)
T ss_dssp             SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------CCTTC
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC-----------CCCCC
Confidence            89999999998654332   23334566778887554    55556667778999999988874           44567


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      ..|+.||++.+.+++.++.+   .++++++++||.|++.
T Consensus       157 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~  195 (255)
T 1fmc_A          157 TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTD  195 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSH
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcch
Confidence            89999999999999999987   4899999999977663

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.95  E-value=8.6e-27  Score=205.03  Aligned_cols=176  Identities=16%  Similarity=0.143  Sum_probs=136.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcc----hhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc--
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIG----AVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--  143 (267)
                      +|+||||||++|||+++|++|+++|++|++++|+....++    +.+..+++...+.++.++.+|++|.+++++++++  
T Consensus        45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~  124 (346)
T 3kvo_A           45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAI  124 (346)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            4999999999999999999999999999999987654333    2222333333456889999999999999998876  


Q ss_pred             ---CCCCEEEEccccCCcCCCccCh----HHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCC
Q 024488          144 ---NAFDAVMHFAAVAYVGESTLDP----LKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       144 ---~~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                         +++|+||||||+.......+.+    +..++.|+.++    +.++|.|++++.++||++||...+..         .
T Consensus       125 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~---------~  195 (346)
T 3kvo_A          125 KKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNP---------V  195 (346)
T ss_dssp             HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCG---------G
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCC---------C
Confidence               6899999999987554443333    44566777774    44666677777899999999877631         0


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc--CCCcEEEEeccc-ccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKN--SDMAVMILRLVV-FFTLV  254 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e--~g~~~~~vrp~~-v~~~~  254 (267)
                      +.++...|+.||++++.+++.++.|  .++++++|.||+ |.|..
T Consensus       196 ~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~~  240 (346)
T 3kvo_A          196 WFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAA  240 (346)
T ss_dssp             GTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccHH
Confidence            1455789999999999999999998  479999999995 66643

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=1.5e-27  Score=203.28  Aligned_cols=171  Identities=14%  Similarity=0.082  Sum_probs=133.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+|+||||+||||++++++|+++|++|++++|+...   ..+..+++...+.++.++.+|++|.+++++++++     +
T Consensus        31 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  107 (272)
T 1yb1_A           31 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHG---LEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG  107 (272)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHH---HHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence            4999999999999999999999999999999975432   2222233322245789999999999999988875     5


Q ss_pred             CCCEEEEccccCCcCCCccC----hHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLD----PLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~----~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+.......+.    .+..++.|+.+    ++.+++.|.+.+.++||++||.+.+.           +.++
T Consensus       108 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~  176 (272)
T 1yb1_A          108 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV-----------SVPF  176 (272)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC-----------CHHH
T ss_pred             CCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC-----------CCCC
Confidence            89999999998655443332    23456677777    45577777777888999999988763           3345


Q ss_pred             CChHHHHHHHHHHHHHHhhhcC------CCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKNS------DMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e~------g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++++.+++.++.|+      |+++++|+||+|.|..
T Consensus       177 ~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~  220 (272)
T 1yb1_A          177 LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGF  220 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCS
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCc
Confidence            6789999999999999999873      8999999999777654

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.95  E-value=3.3e-27  Score=197.84  Aligned_cols=172  Identities=13%  Similarity=0.065  Sum_probs=122.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|+++++  ++.+...+..+++...+.++.++.+|++|.+++++++++     +
T Consensus         5 ~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            5 GKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGS--PASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG   82 (247)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEEC--TTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCEEEEEcC--cCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            389999999999999999999999999999943  222222222222222245789999999999999988875     5


Q ss_pred             CCCEEEEccccCCcCC----CccChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~----~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||......    ..+..+..++.|+.++    +.+++.|.+.+.++||++||.+.+.           +.++
T Consensus        83 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  151 (247)
T 2hq1_A           83 RIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGII-----------GNAG  151 (247)
T ss_dssp             CCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------------
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc-----------CCCC
Confidence            8999999999864332    2344566778888884    4466666667778999999975431           3345


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++++.+++.++.|   .++++++++||++.+..
T Consensus       152 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  192 (247)
T 2hq1_A          152 QANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDM  192 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             CcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccc
Confidence            779999999999999999987   48999999999887743

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.95  E-value=4.6e-27  Score=198.83  Aligned_cols=171  Identities=18%  Similarity=0.118  Sum_probs=129.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCC-------CceEEEEccCCCHHHHHHHhh
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEP-------GRLQFIYADLGDAKAVNKFFS  142 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~d~~~v~~~~~  142 (267)
                      +|+|+||||+||||++++++|+++|++|++++|+..   ...+..+++...+       .++.++.+|++|.++++++++
T Consensus         7 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            7 SALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRA---AAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHH---HHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChH---HHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            389999999999999999999999999999997543   2223223332222       468899999999999998887


Q ss_pred             c-----CCC-CEEEEccccCCcCC----CccChHHHHHHhHHHHHHH----HHHHHHcC-CCEEEEEeccccccCCCCCC
Q 024488          143 E-----NAF-DAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVV----LESMARHG-VDTLIYSSTCATYGEPEKMP  207 (267)
Q Consensus       143 ~-----~~~-D~li~~Ag~~~~~~----~~~~~~~~~~~~~~~~~~~----l~~~~~~~-~~~iV~vSS~~~~g~~~~~~  207 (267)
                      .     +++ |+||||||......    ..+..+..++.|+.++.++    ++.|.+++ .++||++||.+.+.      
T Consensus        84 ~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~------  157 (264)
T 2pd6_A           84 QVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV------  157 (264)
T ss_dssp             HHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH------
T ss_pred             HHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc------
Confidence            5     566 99999999865433    2234455667787776654    44555555 67999999987653      


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          208 ITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       208 ~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                           +.++...|+.||++++.+++.++.+   .|+++++++||+|+|..
T Consensus       158 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  202 (264)
T 2pd6_A          158 -----GNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPM  202 (264)
T ss_dssp             -----CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC
T ss_pred             -----CCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccc
Confidence                 3455789999999999999999988   78999999999766643

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.95  E-value=2.1e-27  Score=201.73  Aligned_cols=172  Identities=18%  Similarity=0.153  Sum_probs=134.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+||||||+||||++++++|+++|++|+++.+  ++.+...+..+++...+.++.++.+|++|.++++++++.     +
T Consensus        26 ~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~--r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (267)
T 4iiu_A           26 SRSVLVTGASKGIGRAIARQLAADGFNIGVHYH--RDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHG  103 (267)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES--SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC--CchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            389999999999999999999999999988764  333344444444444456899999999999999988875     6


Q ss_pred             CCCEEEEccccCCcCCC----ccChHHHHHHhHHHHHHHHH----HHH-HcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLVVLE----SMA-RHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~----~~~~~~~~~~~~~~~~~~l~----~~~-~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||+......    .++.+..++.|+.++.+++.    .|. +.+.++||++||.+.+.           +.+
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  172 (267)
T 4iiu_A          104 AWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVM-----------GNR  172 (267)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHH-----------CCT
T ss_pred             CccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhcc-----------CCC
Confidence            89999999998755442    23344556777777655444    443 55678999999987763           455


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...|+.||++.+.+++.++.|   .|+++++|+||+|.|..
T Consensus       173 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  214 (267)
T 4iiu_A          173 GQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGM  214 (267)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTT
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCc
Confidence            6789999999999999999988   48999999999777754

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.95  E-value=3.8e-27  Score=201.15  Aligned_cols=173  Identities=18%  Similarity=0.126  Sum_probs=134.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+....+...+.+++.   +.++.++.+|++|.++++++++.     +
T Consensus        34 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  110 (279)
T 3ctm_A           34 GKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY---GVHSKAYKCNISDPKSVEETISQQEKDFG  110 (279)
T ss_dssp             TCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH---CSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            489999999999999999999999999999997654433333333322   34788999999999999988875     5


Q ss_pred             CCCEEEEccccCCc-CCCc-cC----hHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYV-GEST-LD----PLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       145 ~~D~li~~Ag~~~~-~~~~-~~----~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      ++|+||||||.... .... +.    .+..++.|+.+    ++.+++.|.+++.++||++||.+.+..         .+.
T Consensus       111 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---------~~~  181 (279)
T 3ctm_A          111 TIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIV---------NIP  181 (279)
T ss_dssp             CCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC------------
T ss_pred             CCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccC---------CCC
Confidence            79999999998654 3322 22    23456677777    678899998888899999999877521         014


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ++...|+.||++.+.+++.++.|   .+ ++++|+||+|.|...
T Consensus       182 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~  224 (279)
T 3ctm_A          182 QLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDIT  224 (279)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTT
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccc
Confidence            45678999999999999999988   46 999999998887653

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.95  E-value=5.9e-27  Score=195.11  Aligned_cols=173  Identities=16%  Similarity=0.129  Sum_probs=131.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      ||++|||||+||||++++++|+++|++|++++|+....++..+.+.+  ..+.++.++.+|++|.+++++++++     +
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQ--EQGVEVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--HHCCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--hcCCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            58999999999999999999999999999999754333333333321  1245789999999999999999876     6


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+.......+    +.+..++.|+.++..    ++|.|.+ +.+++|++||...+.           +.+.
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~~ii~~sS~~~~~-----------~~~~  147 (235)
T 3l77_A           80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKR-TGGLALVTTSDVSAR-----------LIPY  147 (235)
T ss_dssp             SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEECCGGGSS-----------CCTT
T ss_pred             CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCcEEEEecchhcc-----------cCCC
Confidence            8999999999876554333    334456677777544    5555633 346788877766542           3445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc-CCCcEEEEeccccccccce
Q 024488          217 INPYGKAKKMAEDIILDFSKN-SDMAVMILRLVVFFTLVAF  256 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e-~g~~~~~vrp~~v~~~~~~  256 (267)
                      ...|+.||++.+.+++.+..+ .++++++|+||+|.|.+..
T Consensus       148 ~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~  188 (235)
T 3l77_A          148 GGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGG  188 (235)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTT
T ss_pred             cchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccccc
Confidence            678999999999999999666 6999999999999886643

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.95  E-value=3.9e-27  Score=198.70  Aligned_cols=161  Identities=17%  Similarity=0.129  Sum_probs=129.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+....              .++.++++|++|+++++++++.     +
T Consensus        21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--------------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g   86 (253)
T 2nm0_A           21 SRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP--------------EGFLAVKCDITDTEQVEQAYKEIEETHG   86 (253)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC--------------TTSEEEECCTTSHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh--------------ccceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            48999999999999999999999999999999753221              1367899999999999988875     6


Q ss_pred             CCCEEEEccccCCcCC----CccChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~----~~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+....+    ..++.+..++.|+.++..    +++.|.+++.++||++||.+.+.           +.++
T Consensus        87 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~  155 (253)
T 2nm0_A           87 PVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLL-----------GSAG  155 (253)
T ss_dssp             SCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCC-----------CHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC-----------CCCC
Confidence            7999999999864432    344556777888887544    56677777788999999987652           2334


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ...|+.||++++.+++.++.|   .|+++++|+||+|.|...
T Consensus       156 ~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  197 (253)
T 2nm0_A          156 QANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMT  197 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcch
Confidence            678999999999999999987   589999999998888653

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.95  E-value=5.5e-27  Score=198.29  Aligned_cols=169  Identities=17%  Similarity=0.169  Sum_probs=128.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||++|||++++++|+++|++|++++|+.   +.+.+..+++   +.++.++.+|++|.+++++++++     +
T Consensus         9 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   82 (261)
T 3n74_A            9 GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDK---AGAERVAGEI---GDAALAVAADISKEADVDAAVEAALSKFG   82 (261)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCH---HHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            39999999999999999999999999999999643   3333333333   45789999999999999988875     6


Q ss_pred             CCCEEEEccccCCc-CCCc----cChHHHHHHhHHH----HHHHHHHHHHcC----CCEEEEEeccccccCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYV-GEST----LDPLKYYHNITSN----TLVVLESMARHG----VDTLIYSSTCATYGEPEKMPITEE  211 (267)
Q Consensus       145 ~~D~li~~Ag~~~~-~~~~----~~~~~~~~~~~~~----~~~~l~~~~~~~----~~~iV~vSS~~~~g~~~~~~~~e~  211 (267)
                      ++|+||||||+... ....    +..+..++.|+.+    ++.+++.|.+++    .++||++||.+.+.          
T Consensus        83 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------  152 (261)
T 3n74_A           83 KVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR----------  152 (261)
T ss_dssp             CCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS----------
T ss_pred             CCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC----------
Confidence            89999999998652 2222    2334455667776    455677776653    56899999987763          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                       +.+....|++||++.+.+++.++.|   .++++++++||+|.|...
T Consensus       153 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  198 (261)
T 3n74_A          153 -PRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLL  198 (261)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhh
Confidence             5556788999999999999999998   689999999998887553

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.95  E-value=3.1e-27  Score=202.88  Aligned_cols=172  Identities=17%  Similarity=0.134  Sum_probs=128.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcC-CCCCceEEEEccCCC----HHHHHHHhhc-
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGD----AKAVNKFFSE-  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d----~~~v~~~~~~-  143 (267)
                      +|++|||||+||||++++++|+++|++|++++|+..  +...+..+++. ..+.++.++.+|++|    .++++++++. 
T Consensus        23 ~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~--~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           23 APAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSA--EAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCH--HHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCch--HHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            389999999999999999999999999999997540  22222222221 124578999999999    9999888875 


Q ss_pred             ----CCCCEEEEccccCCcCCC-----cc-----ChH----HHHHHhHHHHHH----HHHHHHHcC------CCEEEEEe
Q 024488          144 ----NAFDAVMHFAAVAYVGES-----TL-----DPL----KYYHNITSNTLV----VLESMARHG------VDTLIYSS  195 (267)
Q Consensus       144 ----~~~D~li~~Ag~~~~~~~-----~~-----~~~----~~~~~~~~~~~~----~l~~~~~~~------~~~iV~vS  195 (267)
                          +++|+||||||+....+.     .+     ...    ..++.|+.++..    +++.|.+++      .++||++|
T Consensus       101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~is  180 (288)
T 2x9g_A          101 FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLC  180 (288)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEEC
T ss_pred             HHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEe
Confidence                689999999998654333     22     232    345566666444    555565554      67999999


Q ss_pred             ccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          196 TCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       196 S~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      |.+.+.           +.++...|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       181 S~~~~~-----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  231 (288)
T 2x9g_A          181 DAMVDQ-----------PCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV  231 (288)
T ss_dssp             CTTTTS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred             cccccC-----------CCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence            988763           4556789999999999999999988   48999999999877765

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.95  E-value=3e-27  Score=207.96  Aligned_cols=164  Identities=20%  Similarity=0.302  Sum_probs=137.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC-CC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKD-SY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~-G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      +|+||||||+|+||++++++|+++ |+ +|++++|+..+   ..+..+++.  ..++.++.+|++|.+++.++++  ++|
T Consensus        21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~---~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~--~~D   93 (344)
T 2gn4_A           21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELK---QSEMAMEFN--DPRMRFFIGDVRDLERLNYALE--GVD   93 (344)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHH---HHHHHHHHC--CTTEEEEECCTTCHHHHHHHTT--TCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhh---HHHHHHHhc--CCCEEEEECCCCCHHHHHHHHh--cCC
Confidence            489999999999999999999999 97 99999974322   222222221  2478999999999999999998  899


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (267)
                      +|||+||....+..+.++.+.++.|+.++.++++++.+.+.++||++||...+              .|.+.|+.||+++
T Consensus        94 ~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~--------------~p~~~Y~~sK~~~  159 (344)
T 2gn4_A           94 ICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA--------------NPINLYGATKLCS  159 (344)
T ss_dssp             EEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS--------------SCCSHHHHHHHHH
T ss_pred             EEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC--------------CCccHHHHHHHHH
Confidence            99999997654334456778899999999999999999999999999997665              2367999999999


Q ss_pred             HHHHHHhhhc---CCCcEEEEeccccccccceeecCC
Q 024488          228 EDIILDFSKN---SDMAVMILRLVVFFTLVAFVIKIN  261 (267)
Q Consensus       228 e~l~~~~a~e---~g~~~~~vrp~~v~~~~~~~~Gp~  261 (267)
                      |.++++++.+   .+++++++|||       ++|||+
T Consensus       160 E~~~~~~~~~~~~~g~~~~~vRpg-------~v~g~~  189 (344)
T 2gn4_A          160 DKLFVSANNFKGSSQTQFSVVRYG-------NVVGSR  189 (344)
T ss_dssp             HHHHHHGGGCCCSSCCEEEEECCC-------EETTCT
T ss_pred             HHHHHHHHHHhCCCCcEEEEEEec-------cEECCC
Confidence            9999999876   58999999999       888875

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.95  E-value=6.2e-27  Score=197.81  Aligned_cols=172  Identities=16%  Similarity=0.115  Sum_probs=132.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+||||||+||||++++++|+++|++|++++|+  +.+...+..+++...+.++.++.+|++|.+++++++++     +
T Consensus         7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~--~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (261)
T 1gee_A            7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRS--KEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCC--ChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999972  22222222233322245788999999999999988875     5


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHHHH----HHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTL----VVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~----~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||........    +..+..++.|+.++.    .+++.|.+++ .++||++||.+.+.           +.+
T Consensus        85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~  153 (261)
T 1gee_A           85 KLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI-----------PWP  153 (261)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS-----------CCT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC-----------CCC
Confidence            899999999986543322    233455667777754    4566677766 68999999987762           456


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...|+.||++.+.+++.++.+   .++++++++||+|+|..
T Consensus       154 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  195 (261)
T 1gee_A          154 LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPI  195 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGG
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCch
Confidence            6789999999999999999987   48999999999777754

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.95  E-value=4.2e-27  Score=205.69  Aligned_cols=175  Identities=19%  Similarity=0.159  Sum_probs=135.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhc---CCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQEL---FPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +|+||||||+||||++++++|+++|++|++++|+.++.+...+.+++.   ...+.++.++.+|++|.++++++++.   
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            389999999999999999999999999999887655544444433322   12235789999999999999999886   


Q ss_pred             CCCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +++|+||||||+....+..+    ..+..++.|+.++.+    ++|.|++++.++||++||.+.+.           +.+
T Consensus        82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~-----------~~~  150 (327)
T 1jtv_A           82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM-----------GLP  150 (327)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS-----------CCT
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCccccc-----------CCC
Confidence            57999999999865443322    334556677777544    56667777788999999988763           344


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ....|+.||++++.+++.++.|   .|+++++|+||+|.|.+.
T Consensus       151 ~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~  193 (327)
T 1jtv_A          151 FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFM  193 (327)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHH
Confidence            5779999999999999999987   689999999999988653

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.95  E-value=5.2e-27  Score=198.57  Aligned_cols=175  Identities=15%  Similarity=0.085  Sum_probs=133.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|+++++  ++.+...+..+++...+.++.++.+|++|.+++++++++     +
T Consensus         8 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (259)
T 3edm_A            8 NRTIVVAGAGRDIGRACAIRFAQEGANVVLTYN--GAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG   85 (259)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC--SSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC--CCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            499999999999999999999999999999864  233334444444444466889999999999999998876     6


Q ss_pred             CCCEEEEccccC-CcCCCccC----hHHHHHHhHHHHHHHHHHHHHcC--CCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVA-YVGESTLD----PLKYYHNITSNTLVVLESMARHG--VDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       145 ~~D~li~~Ag~~-~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~--~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      ++|+||||||.. ......+.    .+..++.|+.++..++..+.+.-  .++||++||.+.+.          .+.++.
T Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~----------~~~~~~  155 (259)
T 3edm_A           86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRD----------GGGPGA  155 (259)
T ss_dssp             SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHH----------CCSTTC
T ss_pred             CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhcc----------CCCCCc
Confidence            899999999976 33332222    24456778888777777765542  46999999988762          134557


Q ss_pred             ChHHHHHHHHHHHHHHhhhcC--CCcEEEEeccccccccce
Q 024488          218 NPYGKAKKMAEDIILDFSKNS--DMAVMILRLVVFFTLVAF  256 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e~--g~~~~~vrp~~v~~~~~~  256 (267)
                      ..|++||++++.+++.++.|+  .+++++|+||+|.|....
T Consensus       156 ~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~  196 (259)
T 3edm_A          156 LAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHD  196 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccc
Confidence            899999999999999999983  399999999988886543

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.95  E-value=6.2e-27  Score=202.07  Aligned_cols=172  Identities=22%  Similarity=0.322  Sum_probs=144.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---CCCC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAFD  147 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~~~D  147 (267)
                      +||||||+|+||++++++|+++| ++|++++|......  .+.+..       +. +.+|++|.+.++++++.   .++|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~-------~~-~~~d~~~~~~~~~~~~~~~~~~~d   70 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLVD-------LN-IADYMDKEDFLIQIMAGEEFGDVE   70 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHHT-------SC-CSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcCc-------ce-eccccccHHHHHHHHhccccCCCc
Confidence            48999999999999999999999 99999997543211  111111       22 67899999999988873   2599


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (267)
                      +|||+||....  ...++++.++.|+.++.++++++.+.+. +||++||.++|+.....+++|+.+..+.+.|+.+|.++
T Consensus        71 ~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~  147 (310)
T 1eq2_A           71 AIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLF  147 (310)
T ss_dssp             EEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHH
T ss_pred             EEEECcccccC--cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHH
Confidence            99999997543  3456788899999999999999999888 99999999999877666788988888899999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          228 EDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       228 e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      |.+++.++++++++++++||+       ++|||+..
T Consensus       148 e~~~~~~~~~~g~~~~~lrp~-------~v~G~~~~  176 (310)
T 1eq2_A          148 DEYVRQILPEANSQIVGFRYF-------NVYGPREG  176 (310)
T ss_dssp             HHHHHHHGGGCSSCEEEEEEC-------EEESSSCG
T ss_pred             HHHHHHHHHHcCCCEEEEeCC-------cEECcCCC
Confidence            999999998899999999999       89998754

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.95  E-value=7.7e-27  Score=196.92  Aligned_cols=167  Identities=14%  Similarity=0.139  Sum_probs=131.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      |++|||||++|||++++++|+++|  ++|++++|+.   +.+.+..++.   +.++.++.+|++|.+++++++++     
T Consensus         3 k~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (254)
T 3kzv_A            3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSE---APLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGH   76 (254)
T ss_dssp             CEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCH---HHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCH---HHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            899999999999999999999985  7888888643   3333333333   35789999999999999998876     


Q ss_pred             CCCCEEEEccccCCc-CCCcc----ChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYV-GESTL----DPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~-~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      +++|+||||||+... ....+    +.+..++.|+.++    +.++|.|++++ ++||++||.+.+.           +.
T Consensus        77 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~-----------~~  144 (254)
T 3kzv_A           77 GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNM-----------YF  144 (254)
T ss_dssp             SCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCC-----------SS
T ss_pred             CCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhcc-----------CC
Confidence            689999999998543 33222    2334556677664    44667777766 8999999988763           55


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc-CCCcEEEEeccccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN-SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e-~g~~~~~vrp~~v~~~~~  255 (267)
                      ++...|+.||++++.+++.++.| .++++++|+||+|.|...
T Consensus       145 ~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~  186 (254)
T 3kzv_A          145 SSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQ  186 (254)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCS
T ss_pred             CCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhH
Confidence            66789999999999999999988 589999999998888654

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.95  E-value=8.3e-27  Score=199.91  Aligned_cols=171  Identities=13%  Similarity=0.069  Sum_probs=133.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+|+||||+||||++++++|+++|++|++++|+.   +...+..+++...+.++.++.+|++|.+++++++++     +
T Consensus        44 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~  120 (285)
T 2c07_A           44 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQ---KSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK  120 (285)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSH---HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCH---HHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence            48999999999999999999999999999988643   233333333333355788999999999999998865     5


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+.......    +..+..++.|+.+    ++.+++.|.+.+.++||++||.+.+.           +.++
T Consensus       121 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~  189 (285)
T 2c07_A          121 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT-----------GNVG  189 (285)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------CCTT
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc-----------CCCC
Confidence            899999999986543322    2334556677777    55567777777778999999987763           3445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++++.+++.++.|   .|+++++++||+|.+..
T Consensus       190 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  230 (285)
T 2c07_A          190 QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDM  230 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCc
Confidence            779999999999999999987   48999999999777753

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.95  E-value=4e-27  Score=200.08  Aligned_cols=161  Identities=19%  Similarity=0.143  Sum_probs=128.3

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      .+|++|||||+||||+++|++|+++|++|++++|+....+              ....+.+|++|.++++++++.     
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~--------------~~~~~~~Dv~~~~~~~~~~~~~~~~~   92 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA--------------ADLHLPGDLREAAYADGLPGAVAAGL   92 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC--------------CSEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--------------hhhccCcCCCCHHHHHHHHHHHHHhc
Confidence            3499999999999999999999999999999987433211              123357999999999888765     


Q ss_pred             CCCCEEEEccccCCcCCCccCh----HHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTLDP----LKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +++|+||||||+.......+.+    +..++.|+.++    +.++|.|++++.++||++||.+.+.           +.+
T Consensus        93 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~  161 (266)
T 3uxy_A           93 GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLR-----------PGP  161 (266)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTB-----------CCT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-----------CCC
Confidence            6899999999987654433333    34455677664    4466777888889999999988763           455


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       162 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  203 (266)
T 3uxy_A          162 GHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPM  203 (266)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchH
Confidence            6789999999999999999988   48999999999887743

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.95  E-value=1.9e-27  Score=199.35  Aligned_cols=171  Identities=16%  Similarity=0.105  Sum_probs=133.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+++||||+||||++++++|+++|++|++++|+....+...+.+++.  .+.++.++.+|++|.+++++++++     ++
T Consensus         8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (248)
T 2pnf_A            8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANK--YGVKAHGVEMNLLSEESINKAFEEIYNLVDG   85 (248)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--HCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhh--cCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            89999999999999999999999999999997543222222222221  134688999999999999988875     58


Q ss_pred             CCEEEEccccCCcCCC----ccChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGES----TLDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~----~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|+||||||.......    .+..+..++.|+.++    +.+++.|.+++.++||++||.+.+.           +.++.
T Consensus        86 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~  154 (248)
T 2pnf_A           86 IDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFT-----------GNVGQ  154 (248)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHH-----------CCTTC
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcC-----------CCCCC
Confidence            9999999998654332    233445677788886    5567777777788999999976552           33457


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..|+.||++.+.+++.+++|   .++++++++||+|.+..
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~  194 (248)
T 2pnf_A          155 VNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDM  194 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCch
Confidence            79999999999999999987   48999999999777654

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.95  E-value=7.9e-27  Score=195.14  Aligned_cols=166  Identities=17%  Similarity=0.159  Sum_probs=129.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (267)
                      +|+++||||+||||++++++|+++|++|++++|+.   +...+..++.    ..++++.+|++|.++++++++. +++|+
T Consensus         7 ~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~---~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~id~   79 (244)
T 1cyd_A            7 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTN---SDLVSLAKEC----PGIEPVCVDLGDWDATEKALGGIGPVDL   79 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHS----TTCEEEECCTTCHHHHHHHHTTCCCCSE
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHhc----cCCCcEEecCCCHHHHHHHHHHcCCCCE
Confidence            38999999999999999999999999999999643   2222222222    2466789999999999999975 57999


Q ss_pred             EEEccccCCcCCCc----cChHHHHHHhHHHHHH----HHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCCCCCh
Q 024488          149 VMHFAAVAYVGEST----LDPLKYYHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (267)
Q Consensus       149 li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~----~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~  219 (267)
                      ||||||.....+..    +..+..++.|+.++..    +++.|.+++ .++||++||.+.+.           +.++...
T Consensus        80 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~  148 (244)
T 1cyd_A           80 LVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV-----------TFPNLIT  148 (244)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-----------CCTTBHH
T ss_pred             EEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcC-----------CCCCcch
Confidence            99999976543322    2334566778877554    555565556 68999999988874           3455779


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          220 YGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       220 Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      |+.||++.+.+++.++.+   .++++++++||.|++.
T Consensus       149 Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~  185 (244)
T 1cyd_A          149 YSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTD  185 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTH
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCc
Confidence            999999999999999988   6899999999966653

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.95  E-value=3.3e-27  Score=203.05  Aligned_cols=172  Identities=16%  Similarity=0.115  Sum_probs=132.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEe-cCCCCCcchhhhhhhcCCCCCceEEEEccCCCHH-------------
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK-------------  135 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-------------  135 (267)
                      +|++|||||+||||++++++|+++|++|++++ |+....++..+.+++  ..+.++.++++|++|.+             
T Consensus         9 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (291)
T 1e7w_A            9 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNA--RRPNSAITVQADLSNVATAPVSGADGSAPV   86 (291)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH--HSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhh--hcCCeeEEEEeecCCccccccccccccccc
Confidence            48999999999999999999999999999999 754322222222221  12457899999999999             


Q ss_pred             ----HHHHHhhc-----CCCCEEEEccccCCcCCCccCh------------------HHHHHHhHHHH----HHHHHHHH
Q 024488          136 ----AVNKFFSE-----NAFDAVMHFAAVAYVGESTLDP------------------LKYYHNITSNT----LVVLESMA  184 (267)
Q Consensus       136 ----~v~~~~~~-----~~~D~li~~Ag~~~~~~~~~~~------------------~~~~~~~~~~~----~~~l~~~~  184 (267)
                          +++++++.     +++|+||||||+....+..+..                  +..++.|+.++    +.++|.|.
T Consensus        87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~  166 (291)
T 1e7w_A           87 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  166 (291)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence                99888875     6899999999986544433222                  33455666654    45667777


Q ss_pred             HcC------CCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          185 RHG------VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       185 ~~~------~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +++      .++||++||.+.+.           +.++...|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       167 ~~~~~~~~~~g~Iv~isS~~~~~-----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  234 (291)
T 1e7w_A          167 GTPAKHRGTNYSIINMVDAMTNQ-----------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD  234 (291)
T ss_dssp             TSCGGGSCSCEEEEEECCTTTTS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG
T ss_pred             hcCCCCCCCCcEEEEEechhhcC-----------CCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc
Confidence            766      68999999988763           4556789999999999999999988   58999999999998866

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.95  E-value=9.3e-27  Score=198.40  Aligned_cols=170  Identities=15%  Similarity=0.199  Sum_probs=130.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+||||||+||||++++++|+++|++|++++|+..   ...+..+++.. ..++.++.+|++|.++++++++.     +
T Consensus        16 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   91 (278)
T 2bgk_A           16 DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADD---HGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAKHG   91 (278)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChh---HHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            389999999999999999999999999999986432   22233333322 23789999999999999998875     5


Q ss_pred             CCCEEEEccccCCc--CCCc----cChHHHHHHhHHHHHHH----HHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYV--GEST----LDPLKYYHNITSNTLVV----LESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       145 ~~D~li~~Ag~~~~--~~~~----~~~~~~~~~~~~~~~~~----l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      ++|+||||||....  ....    +..+..++.|+.++..+    ++.|.+++.++||++||.+.+.           +.
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~  160 (278)
T 2bgk_A           92 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFT-----------AG  160 (278)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTC-----------CC
T ss_pred             CCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccC-----------CC
Confidence            89999999997532  1212    23345667777775554    4555556778999999998874           22


Q ss_pred             C-CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          215 A-PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       215 ~-~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      + +...|+.||++.+.+++.++.|   .|++++++|||+|+|..
T Consensus       161 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (278)
T 2bgk_A          161 EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPL  204 (278)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCC
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchh
Confidence            3 5678999999999999999987   68999999999666543

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.95  E-value=5.1e-27  Score=198.57  Aligned_cols=171  Identities=18%  Similarity=0.103  Sum_probs=129.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc------
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (267)
                      +|++|||||+||||++++++|+++|++|++++|+...   ..+..+++...+.++.++.+|++|.++++++++.      
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            5 GQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDT---LRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3899999999999999999999999999999975432   2222222222245788999999999999888764      


Q ss_pred             CCCCEEEEccc--cC-----CcCCCc----cChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCC
Q 024488          144 NAFDAVMHFAA--VA-----YVGEST----LDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPI  208 (267)
Q Consensus       144 ~~~D~li~~Ag--~~-----~~~~~~----~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~  208 (267)
                      +++|+||||||  +.     ...+..    +..+..++.|+.+    ++.+++.|.+++.++||++||.+.+.       
T Consensus        82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------  154 (260)
T 2qq5_A           82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQ-------  154 (260)
T ss_dssp             TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTS-------
T ss_pred             CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcC-------
Confidence            57999999995  32     112222    2223444556555    45677788777789999999988763       


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          209 TEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                           ..+...|+.||++++.+++.++.|   +|+++++|+||+|.|.+.
T Consensus       155 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  199 (260)
T 2qq5_A          155 -----YMFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELL  199 (260)
T ss_dssp             -----CCSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC
T ss_pred             -----CCCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHH
Confidence                 223578999999999999999987   589999999999988653

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.95  E-value=8.5e-27  Score=193.95  Aligned_cols=166  Identities=16%  Similarity=0.086  Sum_probs=127.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+|+||||+||||++++++|+++|++|++++|+.   +...+..+++    .++.++.+|++|.++++++++.     ++
T Consensus         6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~---~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (234)
T 2ehd_A            6 GAVLITGASRGIGEATARLLHAKGYRVGLMARDE---KRLQALAAEL----EGALPLPGDVREEGDWARAVAAMEEAFGE   78 (234)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHS----TTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHh----hhceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            7899999999999999999999999999999643   2232222222    2678899999999999988875     58


Q ss_pred             CCEEEEccccCCcCCCc----cChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGEST----LDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|+||||||.....+..    ++.+..++.|+.++    +.+++.|.+++.++||++||.+.+.           +.++.
T Consensus        79 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~  147 (234)
T 2ehd_A           79 LSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKN-----------PFKGG  147 (234)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTS-----------CCTTC
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcC-----------CCCCC
Confidence            99999999986543322    23345566777775    4677888887789999999988763           44567


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..|+.+|++.+.+++.++.|   .|+++++++||+|.|..
T Consensus       148 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  187 (234)
T 2ehd_A          148 AAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGF  187 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC------
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCc
Confidence            89999999999999999887   58999999999887754

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.95  E-value=4.8e-27  Score=203.96  Aligned_cols=181  Identities=23%  Similarity=0.330  Sum_probs=133.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEec-CCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDN-LSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      |+||||||+||||++++++|+++|++|+++.| +....+... .+.++.....+++++.+|++|.++++++++  ++|+|
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~v   78 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVS-FLTNLPGASEKLHFFNADLSNPDSFAAAIE--GCVGI   78 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCH-HHHTSTTHHHHEEECCCCTTCGGGGHHHHT--TCSEE
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHH-HHHhhhccCCceEEEecCCCCHHHHHHHHc--CCCEE
Confidence            78999999999999999999999999999887 432211111 111111111257788999999999999998  78999


Q ss_pred             EEccccCCcCCCccCh-HHHHHHhHHHHHHHHHHHHHc-CCCEEEEEeccccc-cCC-CCCCCCCCCCC--------CCC
Q 024488          150 MHFAAVAYVGESTLDP-LKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATY-GEP-EKMPITEETPQ--------API  217 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~-~~~~iV~vSS~~~~-g~~-~~~~~~e~~~~--------~~~  217 (267)
                      ||+|+..  .....++ ++.++.|+.++.++++++.+. +.++||++||.+++ +.. ...+++|+.+.        .+.
T Consensus        79 ih~A~~~--~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~  156 (322)
T 2p4h_X           79 FHTASPI--DFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPF  156 (322)
T ss_dssp             EECCCCC----------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCT
T ss_pred             EEcCCcc--cCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcc
Confidence            9999743  1122222 347889999999999999887 67899999998754 322 12345565432        122


Q ss_pred             C-hHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          218 N-PYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       218 ~-~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      . .|+.||.+.|.+++.+++++|++++++||+       ++|||+..
T Consensus       157 ~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~-------~v~g~~~~  196 (322)
T 2p4h_X          157 GWNYAVSKTLAEKAVLEFGEQNGIDVVTLILP-------FIVGRFVC  196 (322)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHTTCCEEEEEEC-------EEESCCCS
T ss_pred             cccHHHHHHHHHHHHHHHHHhcCCcEEEEcCC-------ceECCCCC
Confidence            2 699999999999999988889999999999       89998754

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.95  E-value=9.5e-27  Score=195.80  Aligned_cols=170  Identities=15%  Similarity=0.118  Sum_probs=131.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCce-EEEEccCCCHHHHHHHhhc----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRL-QFIYADLGDAKAVNKFFSE----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~v~~~~~~----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+.   ++..+..+++   +.++ .++.+|++|.++++++++.    +
T Consensus        11 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (254)
T 2wsb_A           11 GACAAVTGAGSGIGLEICRAFAASGARLILIDREA---AALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEAEAVA   84 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHHHhhC
Confidence            38999999999999999999999999999999743   2233323333   2356 8899999999999988865    6


Q ss_pred             CCCEEEEccccCCcCCCccCh----HHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||........+.+    +..++.|+.+    ++.+++.|.+++.++||++||.+.+...         +..+
T Consensus        85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~~~  155 (254)
T 2wsb_A           85 PVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN---------RPQF  155 (254)
T ss_dssp             CCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SSSC
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC---------CCCc
Confidence            899999999986554433333    3455677777    5567777877788999999998876311         2223


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++.+.+++.++.+   .|++++++|||+|+|..
T Consensus       156 ~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~  196 (254)
T 2wsb_A          156 ASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEM  196 (254)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchh
Confidence            478999999999999999988   48999999999777643

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.95  E-value=3.5e-27  Score=200.87  Aligned_cols=174  Identities=18%  Similarity=0.225  Sum_probs=130.0

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      .+|+||||||+||||+++|++|+++|++|+++.+  ++.+...+..+++...+.++.++.+|++|.++++++++.     
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYA--ANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES--SCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC--CChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            3589999999999999999999999999988753  233333333333333356899999999999999998876     


Q ss_pred             CCCCEEEEccccCCc-CC----CccChHHHHHHhHHHHHHH----HHHHHHc---CCCEEEEEeccccccCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYV-GE----STLDPLKYYHNITSNTLVV----LESMARH---GVDTLIYSSTCATYGEPEKMPITEE  211 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~-~~----~~~~~~~~~~~~~~~~~~~----l~~~~~~---~~~~iV~vSS~~~~g~~~~~~~~e~  211 (267)
                      +++|+||||||+... ..    ..+..+..++.|+.++..+    ++.|.+.   +.++||++||.+.+..         
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------  173 (272)
T 4e3z_A          103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILG---------  173 (272)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHC---------
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccC---------
Confidence            589999999998653 22    2233455677787776554    4555442   4679999999877631         


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                       .......|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       174 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  218 (272)
T 4e3z_A          174 -SATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDL  218 (272)
T ss_dssp             -CTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred             -CCCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCc
Confidence             1224568999999999999999988   48999999999888754

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.95  E-value=1.3e-26  Score=193.87  Aligned_cols=167  Identities=18%  Similarity=0.172  Sum_probs=130.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (267)
                      +|+|+||||+||||++++++|+++|++|++++|+.   ++..+..++.    ....++.+|++|.++++++++. +++|+
T Consensus         7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~---~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~id~   79 (244)
T 3d3w_A            7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ---ADLDSLVREC----PGIEPVCVDLGDWEATERALGSVGPVDL   79 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHS----TTCEEEECCTTCHHHHHHHHTTCCCCCE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHc----CCCCEEEEeCCCHHHHHHHHHHcCCCCE
Confidence            38999999999999999999999999999999643   2232222222    1456789999999999999976 57999


Q ss_pred             EEEccccCCcCCCc----cChHHHHHHhHHHHHH----HHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCCCCCh
Q 024488          149 VMHFAAVAYVGEST----LDPLKYYHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (267)
Q Consensus       149 li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~----~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~  219 (267)
                      ||||||.....+..    +..+..++.|+.++..    +++.|.+++ .++||++||.+.+.           +.++...
T Consensus        80 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~  148 (244)
T 3d3w_A           80 LVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR-----------AVTNHSV  148 (244)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-----------CCTTBHH
T ss_pred             EEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhcc-----------CCCCCch
Confidence            99999986543322    2334566777777444    556666566 68999999988773           4456789


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          220 YGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       220 Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      |+.||++++.+++.++.|   .++++++++||.|+|..
T Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~  186 (244)
T 3d3w_A          149 YCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSM  186 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTT
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccc
Confidence            999999999999999987   58999999999777644

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.95  E-value=1.2e-26  Score=194.79  Aligned_cols=170  Identities=18%  Similarity=0.191  Sum_probs=132.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+.   +...+..+++.. ..++.++.+|++|.++++++++.     +
T Consensus         6 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (251)
T 1zk4_A            6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHS---DVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHhhc-cCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            38999999999999999999999999999999743   223333333322 25789999999999999988875     5


Q ss_pred             CCCEEEEccccCCcCCCcc----ChHHHHHHhHHH----HHHHHHHHHHcCC-CEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTL----DPLKYYHNITSN----TLVVLESMARHGV-DTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~----~~~~l~~~~~~~~-~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||........+    ..+..++.|+.+    ++.+++.|.+++. ++||++||.+.+.           +.+
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~  150 (251)
T 1zk4_A           82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV-----------GDP  150 (251)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS-----------CCT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhcc-----------CCC
Confidence            7999999999865443332    234456677765    4557777777766 7999999988874           345


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN-----SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e-----~g~~~~~vrp~~v~~~~  254 (267)
                      +...|+.||++.+.+++.++.|     .++++++++||+|.|..
T Consensus       151 ~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~  194 (251)
T 1zk4_A          151 SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPL  194 (251)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHH
T ss_pred             CCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchh
Confidence            6789999999999999998874     58999999999877743

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.95  E-value=5.2e-27  Score=202.74  Aligned_cols=183  Identities=14%  Similarity=0.050  Sum_probs=134.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCC-CCceEEEEccCCCH-HHHHHHhhc----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDA-KAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~-~~v~~~~~~----  143 (267)
                      +|+||||||+||||+++|++|+++|++|++++|+...   ..+..+++... +.++.++.+|++|. ++++++++.    
T Consensus        12 ~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A           12 RRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTK---GHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            4899999999999999999999999999999975433   33333333222 34789999999997 888887764    


Q ss_pred             -CCCCEEEEccccCCcC----------------------------------CCccChHHHHHHhHHH----HHHHHHHHH
Q 024488          144 -NAFDAVMHFAAVAYVG----------------------------------ESTLDPLKYYHNITSN----TLVVLESMA  184 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~----------------------------------~~~~~~~~~~~~~~~~----~~~~l~~~~  184 (267)
                       +++|+||||||+....                                  ...+..+..++.|+.+    ++.++|.|.
T Consensus        89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~  168 (311)
T 3o26_A           89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ  168 (311)
T ss_dssp             HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence             6899999999986321                                  1222334557788887    455667777


Q ss_pred             HcCCCEEEEEeccccccCC-CC-------------------------------CCCCCCCCCCCCChHHHHHHHHHHHHH
Q 024488          185 RHGVDTLIYSSTCATYGEP-EK-------------------------------MPITEETPQAPINPYGKAKKMAEDIIL  232 (267)
Q Consensus       185 ~~~~~~iV~vSS~~~~g~~-~~-------------------------------~~~~e~~~~~~~~~Y~~sK~a~e~l~~  232 (267)
                      +.+.++||++||.+.+... ..                               ....+....++...|++||++++.+++
T Consensus       169 ~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~  248 (311)
T 3o26_A          169 LSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR  248 (311)
T ss_dssp             TSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHH
T ss_pred             cCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHH
Confidence            7777899999998765321 00                               001111122346789999999999999


Q ss_pred             HhhhcC-CCcEEEEeccccccccc
Q 024488          233 DFSKNS-DMAVMILRLVVFFTLVA  255 (267)
Q Consensus       233 ~~a~e~-g~~~~~vrp~~v~~~~~  255 (267)
                      .++.++ ++++++|+||+|.|.+.
T Consensus       249 ~la~e~~~i~v~~v~PG~v~T~~~  272 (311)
T 3o26_A          249 VLANKIPKFQVNCVCPGLVKTEMN  272 (311)
T ss_dssp             HHHHHCTTSEEEEECCCSBCSGGG
T ss_pred             HHHhhcCCceEEEecCCceecCCc
Confidence            999984 69999999999988654

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.95  E-value=3e-27  Score=201.62  Aligned_cols=170  Identities=18%  Similarity=0.196  Sum_probs=130.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEec-CCCCCcchhhhhhhcCCC-CCceEEEEccCCCH----HHHHHHhhc
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN-LSRGNIGAVKVLQELFPE-PGRLQFIYADLGDA----KAVNKFFSE  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~----~~v~~~~~~  143 (267)
                      +|++|||||+||||++++++|+++|++|++++| +.   +...+..+++... +.++.++.+|++|.    +++++++++
T Consensus        11 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A           11 CPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSE---GAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH---HHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCh---HHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            389999999999999999999999999999997 33   2333322332111 34788999999999    999888875


Q ss_pred             -----CCCCEEEEccccCCcCCCc---------------cChHHHHHHhHHHHHHHHHHHHH---cCC------CEEEEE
Q 024488          144 -----NAFDAVMHFAAVAYVGEST---------------LDPLKYYHNITSNTLVVLESMAR---HGV------DTLIYS  194 (267)
Q Consensus       144 -----~~~D~li~~Ag~~~~~~~~---------------~~~~~~~~~~~~~~~~~l~~~~~---~~~------~~iV~v  194 (267)
                           +++|+||||||+....+..               +..+..++.|+.++..++..+.+   ++.      ++||++
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~i  167 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL  167 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEE
Confidence                 5899999999986544332               22335667788887766666554   344      799999


Q ss_pred             eccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          195 STCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       195 SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      ||.+.+.           +.++...|+.||++++.+++.++.|   .|+++++|+||+|.|.
T Consensus       168 sS~~~~~-----------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~  218 (276)
T 1mxh_A          168 CDAMTDL-----------PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP  218 (276)
T ss_dssp             CCGGGGS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred             CchhhcC-----------CCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC
Confidence            9988873           4556789999999999999999988   4899999999977665

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.95  E-value=9.7e-27  Score=196.95  Aligned_cols=169  Identities=20%  Similarity=0.226  Sum_probs=131.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+|+||||+||||++++++|+++|++|++++|+...   ..+..+++   +.++.++.+|++|.+++++++++     +
T Consensus        12 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (265)
T 2o23_A           12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSG---GEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKFG   85 (265)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSS---HHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHh---HHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            3899999999999999999999999999999975433   33333333   34789999999999999988875     5


Q ss_pred             CCCEEEEccccCCcCCC----------ccChHHHHHHhHHHHHHHH----HHHHHc------CCCEEEEEeccccccCCC
Q 024488          145 AFDAVMHFAAVAYVGES----------TLDPLKYYHNITSNTLVVL----ESMARH------GVDTLIYSSTCATYGEPE  204 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~----------~~~~~~~~~~~~~~~~~~l----~~~~~~------~~~~iV~vSS~~~~g~~~  204 (267)
                      ++|+||||||.......          .+..+..++.|+.++..++    +.|.++      +.++||++||.+.+.   
T Consensus        86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~---  162 (265)
T 2o23_A           86 RVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE---  162 (265)
T ss_dssp             CCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH---
T ss_pred             CCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcC---
Confidence            89999999998644322          2233455677777765554    445444      568999999988874   


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          205 KMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       205 ~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                              +.++...|+.||++++.+++.++.|   .++++++|+||+|.|...
T Consensus       163 --------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  208 (265)
T 2o23_A          163 --------GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLL  208 (265)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--
T ss_pred             --------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccc
Confidence                    3455789999999999999999987   589999999998887543

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.95  E-value=1.9e-27  Score=198.87  Aligned_cols=170  Identities=18%  Similarity=0.117  Sum_probs=131.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEE-ecCCCCCcchhhhhhhcCCCCCceEE-EEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQF-IYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dl~d~~~v~~~~~~----  143 (267)
                      ||+|+||||+||||++++++|+++|++|+++ +|+.   +...+..+++...+.++.. +.+|++|.+++++++++    
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNR---EKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEV   77 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCH---HHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH---HHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHh
Confidence            4899999999999999999999999999998 6543   2222222222222345666 89999999999988764    


Q ss_pred             -CCCCEEEEccccCCcCCC----ccChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYVGES----TLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~~~----~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                       +++|+||||||.....+.    .+..+..++.|+.+    ++.+++.|.+.+.++||++||.+.+.           +.
T Consensus        78 ~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~  146 (245)
T 2ph3_A           78 LGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGIL-----------GN  146 (245)
T ss_dssp             HTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------CC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhcc-----------CC
Confidence             589999999998654332    23344566778777    66788888888888999999987653           33


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      ++...|+.||++.+.+++.+++|   .++++++++||+|+|.
T Consensus       147 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  188 (245)
T 2ph3_A          147 PGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETE  188 (245)
T ss_dssp             SSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCc
Confidence            45679999999999999999988   4899999999977764

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=1.1e-26  Score=197.21  Aligned_cols=167  Identities=23%  Similarity=0.198  Sum_probs=131.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCC--CCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE--PGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +|+++||||+||||++++++|+++|++|++++|+..   ...+..+++...  +.++.++.+|++|.++++++++.    
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            7 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLE---AGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            389999999999999999999999999999997432   222222222221  34688999999999999998875    


Q ss_pred             -CCCCEEEEccccCCcCCCccChHHHHHHhHHH----HHHHHHHHHHcC---CCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYVGESTLDPLKYYHNITSN----TLVVLESMARHG---VDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~---~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                       +++|+||||||...    .+..+..++.|+.+    ++.+++.|.+++   .++||++||.+.+.           +.+
T Consensus        84 ~g~id~lv~~Ag~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  148 (267)
T 2gdz_A           84 FGRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM-----------PVA  148 (267)
T ss_dssp             HSCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-----------CCT
T ss_pred             cCCCCEEEECCCCCC----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccC-----------CCC
Confidence             68999999999753    34567778888775    567888887653   57999999988874           345


Q ss_pred             CCChHHHHHHHHHHHHHHhh--hc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFS--KN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a--~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...|+.||++++.++++++  .|   .|+++++|+||+|.|..
T Consensus       149 ~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~  192 (267)
T 2gdz_A          149 QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAI  192 (267)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchh
Confidence            57789999999999999853  33   68999999999888753

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.95  E-value=5.7e-27  Score=196.53  Aligned_cols=172  Identities=16%  Similarity=0.157  Sum_probs=132.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccC--CCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL--GDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~~~v~~~~~~----  143 (267)
                      +|+++||||+||||++++++|+++|++|++++|+....++..+.+++..  ..+..++.+|+  +|.++++++++.    
T Consensus        14 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           14 GRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG--QPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--SCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC--CCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            4999999999999999999999999999999975443333333333321  24566777777  999999888875    


Q ss_pred             -CCCCEEEEccccCCc-CCCc----cChHHHHHHhHHHHH----HHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYV-GEST----LDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~-~~~~----~~~~~~~~~~~~~~~----~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                       +++|+||||||+... .+..    ++.+..++.|+.++.    .++|.|.+++.++||++||.+.+.           +
T Consensus        92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~  160 (247)
T 3i1j_A           92 FGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRK-----------G  160 (247)
T ss_dssp             HSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTS-----------C
T ss_pred             CCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcC-----------C
Confidence             689999999998532 2222    233445667777754    466666777778999999987763           4


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc----CCCcEEEEecccccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKN----SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e----~g~~~~~vrp~~v~~~~  254 (267)
                      .++...|+.||++.+.+++.++.|    .++++++|+||+|.|..
T Consensus       161 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~  205 (247)
T 3i1j_A          161 RANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM  205 (247)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc
Confidence            556789999999999999999987    47899999999998854

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.95  E-value=1.5e-26  Score=199.42  Aligned_cols=171  Identities=16%  Similarity=0.082  Sum_probs=133.7

Q ss_pred             CCcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           69 GVTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        69 ~~k~vlVTGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      .+|++|||||+|  |||+++|++|+++|++|++++|+.+..+...+..++.    +.+.++.+|++|.+++++++++   
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~  104 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL----GVKLTVPCDVSDAESVDNMFKVLAE  104 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH----TCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc----CCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            349999999997  9999999999999999999997643322232222222    3468899999999999998876   


Q ss_pred             --CCCCEEEEccccCCc----CC----CccChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYV----GE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEE  211 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~----~~----~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~  211 (267)
                        +++|+||||||+...    ..    ..+..+..++.|+.++..++..+...  ..++||++||.+.+.          
T Consensus       105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~----------  174 (296)
T 3k31_A          105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEK----------  174 (296)
T ss_dssp             HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS----------
T ss_pred             HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhcc----------
Confidence              689999999998643    22    22334456677887877777766543  257999999988763          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                       +.+....|++||++++.++++++.|   .|+++++|+||+|.|..
T Consensus       175 -~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~  219 (296)
T 3k31_A          175 -VVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLA  219 (296)
T ss_dssp             -CCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSS
T ss_pred             -CCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCch
Confidence             4566889999999999999999988   58999999999887754

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.95  E-value=1.3e-27  Score=201.81  Aligned_cols=166  Identities=21%  Similarity=0.224  Sum_probs=128.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~  145 (267)
                      +|++|||||++|||++++++|+++|++|++++|.   .++.   .++.   +.++.++.+|++|.++++++++.    ++
T Consensus         9 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~---~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~g~   79 (257)
T 3tl3_A            9 DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDV---VADL---GDRARFAAADVTDEAAVASALDLAETMGT   79 (257)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS---CHHH---HHHT---CTTEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCc---hHHH---HHhc---CCceEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            3999999999999999999999999999999962   2222   2222   45789999999999999988875    68


Q ss_pred             CCEEEEccccCCcC--------CCccChHHHHHHhHHHHHH----HHHHHHH--------cCCCEEEEEeccccccCCCC
Q 024488          146 FDAVMHFAAVAYVG--------ESTLDPLKYYHNITSNTLV----VLESMAR--------HGVDTLIYSSTCATYGEPEK  205 (267)
Q Consensus       146 ~D~li~~Ag~~~~~--------~~~~~~~~~~~~~~~~~~~----~l~~~~~--------~~~~~iV~vSS~~~~g~~~~  205 (267)
                      +|+||||||+....        ...+..+..++.|+.++..    +++.|.+        .+.++||++||.+.+.    
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----  155 (257)
T 3tl3_A           80 LRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD----  155 (257)
T ss_dssp             EEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C----
T ss_pred             CCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC----
Confidence            99999999975321        2233445566778777544    5566655        4567999999988762    


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          206 MPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       206 ~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                             +.++...|++||++++.+++.++.|   .|+++++|+||+|.|...
T Consensus       156 -------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~  201 (257)
T 3tl3_A          156 -------GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLL  201 (257)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC
T ss_pred             -------CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhh
Confidence                   3445678999999999999999988   589999999998887543

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.95  E-value=2.9e-27  Score=204.94  Aligned_cols=163  Identities=23%  Similarity=0.285  Sum_probs=114.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||+|+||++++++|+++|++|++++|+...              + +  ++.+|++|.+++.++++..++|+||
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------------~-~--~~~~Dl~d~~~~~~~~~~~~~d~vi   65 (315)
T 2ydy_A            3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR--------------P-K--FEQVNLLDSNAVHHIIHDFQPHVIV   65 (315)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-----------------------------------CHHHHHHHCCSEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC--------------C-C--eEEecCCCHHHHHHHHHhhCCCEEE
Confidence            789999999999999999999999999999964321              1 1  6789999999999988754589999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (267)
                      |+||.........++++.++.|+.++.++++++.+.+. +||++||.++|+. ...+++|+.+..+.+.|+.+|.++|.+
T Consensus        66 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~~~~~~E~~~~~~~~~Y~~sK~~~e~~  143 (315)
T 2ydy_A           66 HCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKA  143 (315)
T ss_dssp             ECC-------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-SSCSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             ECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-CCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence            99997654434556777889999999999999998875 9999999999987 556788998888899999999999999


Q ss_pred             HHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          231 ILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       231 ~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      ++.+    +++++++||+       ++|||+..
T Consensus       144 ~~~~----~~~~~~lR~~-------~v~G~~~~  165 (315)
T 2ydy_A          144 VLEN----NLGAAVLRIP-------ILYGEVEK  165 (315)
T ss_dssp             HHHH----CTTCEEEEEC-------SEECSCSS
T ss_pred             HHHh----CCCeEEEeee-------eeeCCCCc
Confidence            9986    4567999999       88888764

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=9.6e-27  Score=198.82  Aligned_cols=175  Identities=17%  Similarity=0.139  Sum_probs=135.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+....++..+.+++. .....+.++.+|++|.++++++++.     +
T Consensus        32 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  110 (279)
T 1xg5_A           32 DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSA-GYPGTLIPYRCDLSNEEDILSMFSAIRSQHS  110 (279)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhc-CCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            489999999999999999999999999999997543322222222221 1124688899999999999988875     5


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHH----HHHHHHHHHHcCC--CEEEEEeccccccCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSN----TLVVLESMARHGV--DTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~----~~~~l~~~~~~~~--~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      ++|+||||||........    +..+..++.|+.+    ++.+++.|.+.+.  ++||++||.+.+..         .+.
T Consensus       111 ~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~---------~~~  181 (279)
T 1xg5_A          111 GVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV---------LPL  181 (279)
T ss_dssp             CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC---------CSC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc---------CCC
Confidence            899999999986544332    2334556777777    7788999988774  89999999887631         134


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN-----SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e-----~g~~~~~vrp~~v~~~~  254 (267)
                      ++...|+.||++++.+++.++.|     .++++++|+||+|.|..
T Consensus       182 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~  226 (279)
T 1xg5_A          182 SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQF  226 (279)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchh
Confidence            45678999999999999999876     47999999999888754

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.95  E-value=1.5e-26  Score=194.37  Aligned_cols=160  Identities=18%  Similarity=0.161  Sum_probs=122.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+....+              ++..+.+|++|.++++++++.     +
T Consensus        15 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~~D~~~~~~~~~~~~~~~~~~g   80 (247)
T 1uzm_A           15 SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK--------------GLFGVEVDVTDSDAVDRAFTAVEEHQG   80 (247)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT--------------TSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH--------------HhcCeeccCCCHHHHHHHHHHHHHHcC
Confidence            489999999999999999999999999999997543211              112378999999999988875     6


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHHHH----HHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~----~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+....+..    +..+..++.|+.++.    .+++.|++++.++||++||.+.+.           +.++
T Consensus        81 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  149 (247)
T 1uzm_A           81 PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW-----------GIGN  149 (247)
T ss_dssp             SCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------C
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhcc-----------CCCC
Confidence            899999999986543322    233445667777644    466667777778999999987652           3445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++.+.+++.++.|   .|+++++|+||+|.|..
T Consensus       150 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  190 (247)
T 1uzm_A          150 QANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDM  190 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccc
Confidence            779999999999999999988   58999999999888743

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.95  E-value=9e-27  Score=200.97  Aligned_cols=170  Identities=15%  Similarity=0.081  Sum_probs=130.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+....++..+.+.+..  +.++.++.+|++|.++++++++.     +
T Consensus        26 ~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (302)
T 1w6u_A           26 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT--GNKVHAIQCDVRDPDMVQNTVSELIKVAG  103 (302)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc--CCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999975432222222222210  34789999999999999988875     5


Q ss_pred             CCCEEEEccccCCcCC----CccChHHHHHHhHHHHHHH----HHHHH-HcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGE----STLDPLKYYHNITSNTLVV----LESMA-RHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~----~~~~~~~~~~~~~~~~~~~----l~~~~-~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||.....+    ..+..+..++.|+.++..+    ++.|. +.+.++||++||.+.+.           +.+
T Consensus       104 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~  172 (302)
T 1w6u_A          104 HPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET-----------GSG  172 (302)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH-----------CCT
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccccc-----------CCC
Confidence            8999999999764433    2233455667777776554    55555 33467999999987763           345


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFT  252 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~  252 (267)
                      +...|+.||++++.+++.++.+   .|+++++++||.|.+
T Consensus       173 ~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t  212 (302)
T 1w6u_A          173 FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKT  212 (302)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCC
Confidence            6789999999999999999988   789999999996655

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.95  E-value=1.9e-27  Score=203.64  Aligned_cols=161  Identities=19%  Similarity=0.232  Sum_probs=136.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      ||+||||| +|+||++++++|+++|++|++++|+....             ..+++++.+|++|.+++.++++. ++|+|
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------------~~~~~~~~~Dl~d~~~~~~~~~~-~~d~v   67 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-------------PAGVQTLIADVTRPDTLASIVHL-RPEIL   67 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-------------CTTCCEEECCTTCGGGCTTGGGG-CCSEE
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-------------ccCCceEEccCCChHHHHHhhcC-CCCEE
Confidence            47899999 59999999999999999999999754321             24688899999999999988873 59999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (267)
                      ||+||...     .+++..++.|+.++.++++++.+.+.++||++||.++||.....+++|+.+..+.+.|+.+|.++|.
T Consensus        68 ih~a~~~~-----~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  142 (286)
T 3gpi_A           68 VYCVAASE-----YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEA  142 (286)
T ss_dssp             EECHHHHH-----HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHH
T ss_pred             EEeCCCCC-----CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHH
Confidence            99998642     3456677889999999999999888899999999999998888889999999999999999999999


Q ss_pred             HHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          230 IILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       230 l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      + +.+     ++++++||+       ++|||+..
T Consensus       143 ~-~~~-----~~~~ilR~~-------~v~G~~~~  163 (286)
T 3gpi_A          143 L-LAA-----YSSTILRFS-------GIYGPGRL  163 (286)
T ss_dssp             H-GGG-----SSEEEEEEC-------EEEBTTBC
T ss_pred             H-Hhc-----CCeEEEecc-------cccCCCch
Confidence            9 553     899999999       99998753

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.95  E-value=1.4e-27  Score=208.89  Aligned_cols=181  Identities=22%  Similarity=0.277  Sum_probs=135.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|+||||||+||||++++++|+++|++|+++.|+..+..... .+.++. ...+++++.+|++|.+++.++++  ++|+|
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~-~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~D~V   84 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVS-HLLELQ-ELGDLKIFRADLTDELSFEAPIA--GCDFV   84 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTH-HHHHHG-GGSCEEEEECCTTTSSSSHHHHT--TCSEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHH-HHHhcC-CCCcEEEEecCCCChHHHHHHHc--CCCEE
Confidence            389999999999999999999999999999887543322111 111221 12368889999999999999887  78999


Q ss_pred             EEccccCCcCCCccCh-HHHHHHhHHHHHHHHHHHHHcC-CCEEEEEecccc-ccCC---CCCCCCCCCCCC--------
Q 024488          150 MHFAAVAYVGESTLDP-LKYYHNITSNTLVVLESMARHG-VDTLIYSSTCAT-YGEP---EKMPITEETPQA--------  215 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~-~~~iV~vSS~~~-~g~~---~~~~~~e~~~~~--------  215 (267)
                      ||+|+....  ...++ ++.++.|+.++.++++++.+.+ .++||++||.++ |+..   ...+++|+.+..        
T Consensus        85 ih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  162 (338)
T 2rh8_A           85 FHVATPVHF--ASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAK  162 (338)
T ss_dssp             EEESSCCCC-----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------
T ss_pred             EEeCCccCC--CCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccC
Confidence            999986422  12233 3478899999999999999885 789999999874 4321   113566665321        


Q ss_pred             C-CChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          216 P-INPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       216 ~-~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      + ...|+.||.++|.+++.+++++|++++++||+       ++|||+..
T Consensus       163 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~-------~v~Gp~~~  204 (338)
T 2rh8_A          163 PPTWGYPASKTLAEKAAWKFAEENNIDLITVIPT-------LMAGSSLT  204 (338)
T ss_dssp             CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEEC-------EEESCCSS
T ss_pred             CccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCC-------ceECCCCC
Confidence            1 22699999999999999987789999999999       99999764

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.95  E-value=1.4e-26  Score=193.50  Aligned_cols=163  Identities=21%  Similarity=0.210  Sum_probs=127.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |+++||||+||||++++++|+++|++|++++|+..   +..   +++     .+.++.+|++| +++++++++     ++
T Consensus         3 k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~---~~~---~~~-----~~~~~~~D~~~-~~~~~~~~~~~~~~g~   70 (239)
T 2ekp_A            3 RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPE---EAA---QSL-----GAVPLPTDLEK-DDPKGLVKRALEALGG   70 (239)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH---HHH---HHH-----TCEEEECCTTT-SCHHHHHHHHHHHHTS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH---HHH---Hhh-----CcEEEecCCch-HHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999997432   221   222     27788999999 887777654     68


Q ss_pred             CCEEEEccccCCcCCCcc----ChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTL----DPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|+||||||+....+..+    ..+..++.|+.+    ++.++|.|.+++.++||++||.+.+...         +.++.
T Consensus        71 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~~~~~  141 (239)
T 2ekp_A           71 LHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAG---------GPVPI  141 (239)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------TTSCC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCC---------CCCCC
Confidence            999999999865443333    233445566666    4556777777778899999998887421         12557


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..|+.||++.+.+++.++.|   .|+++++|+||+|.|..
T Consensus       142 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  181 (239)
T 2ekp_A          142 PAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEF  181 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCch
Confidence            89999999999999999988   48999999999888765

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.95  E-value=2.5e-26  Score=196.62  Aligned_cols=167  Identities=13%  Similarity=0.115  Sum_probs=129.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||++|||++++++|+++|++|++++|+.   +.+.+..++.   +.++.++.+|++|.+++++++++     +
T Consensus         5 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (281)
T 3zv4_A            5 GEVALITGGASGLGRALVDRFVAEGARVAVLDKSA---ERLRELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAFG   78 (281)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCH---HHHHHHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            39999999999999999999999999999999643   3333333332   45789999999999999988876     6


Q ss_pred             CCCEEEEccccCCcCC-----CccC----hHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGE-----STLD----PLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~-----~~~~----~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~  211 (267)
                      ++|+||||||+.....     ..+.    .+..++.|+.++    +.++|.|.+.+ ++||++||.+.+.          
T Consensus        79 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~----------  147 (281)
T 3zv4_A           79 KIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFY----------  147 (281)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTS----------
T ss_pred             CCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhcc----------
Confidence            8999999999854321     1122    233455676664    44666676654 7999999988763          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhcC--CCcEEEEecccccccc
Q 024488          212 TPQAPINPYGKAKKMAEDIILDFSKNS--DMAVMILRLVVFFTLV  254 (267)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~a~e~--g~~~~~vrp~~v~~~~  254 (267)
                       +.+....|++||++++.++++++.|+  .+++++|+||+|.|.+
T Consensus       148 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~  191 (281)
T 3zv4_A          148 -PNGGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDL  191 (281)
T ss_dssp             -SSSSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCc
Confidence             45567889999999999999999883  3999999999998865

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.95  E-value=1.2e-26  Score=195.63  Aligned_cols=167  Identities=12%  Similarity=0.140  Sum_probs=131.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH-HHHHHHhhc----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~----  143 (267)
                      +|+++||||+||||++++++|+++|++ |++++|+..  .+..+.+.+... +.++.++.+|++|. ++++++++.    
T Consensus         5 ~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~--~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T 1sby_A            5 NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN--PTALAELKAINP-KVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCC--HHHHHHHHHHCT-TSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCch--HHHHHHHHHhCC-CceEEEEEEecCCChHHHHHHHHHHHHh
Confidence            389999999999999999999999997 999987542  122233333221 34788999999998 888887765    


Q ss_pred             -CCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHH----HHHHHcC---CCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVL----ESMARHG---VDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~---~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                       +++|+||||||+.    ..+..+..++.|+.++..++    +.|.+++   .++||++||.+.+.           +.+
T Consensus        82 ~g~id~lv~~Ag~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  146 (254)
T 1sby_A           82 LKTVDILINGAGIL----DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN-----------AIH  146 (254)
T ss_dssp             HSCCCEEEECCCCC----CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-----------CCT
T ss_pred             cCCCCEEEECCccC----CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhcc-----------CCC
Confidence             5899999999974    24566788889988866654    4454443   47999999988873           445


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...|+.||++++.+++.++.+   .|+++++|+||+|.|..
T Consensus       147 ~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~  188 (254)
T 1sby_A          147 QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL  188 (254)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCcc
Confidence            5779999999999999999987   68999999999888754

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.95  E-value=4.8e-27  Score=202.02  Aligned_cols=160  Identities=19%  Similarity=0.227  Sum_probs=138.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||+|+||++++++|+ +|++|++++|+.                    .++.+|++|.+++.++++..++|+||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~--------------------~~~~~D~~d~~~~~~~~~~~~~d~vi   59 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHS--------------------KEFCGDFSNPKGVAETVRKLRPDVIV   59 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTC--------------------SSSCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEecccc--------------------ccccccCCCHHHHHHHHHhcCCCEEE
Confidence            479999999999999999999 899999998643                    12468999999999998844599999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (267)
                      |+||.........++++.++.|+.++.++++++.+.+. +||++||.++|+.....+++|+.+..+.+.|+.+|.++|.+
T Consensus        60 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~  138 (299)
T 1n2s_A           60 NAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKA  138 (299)
T ss_dssp             ECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred             ECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHH
Confidence            99997543333467788899999999999999988775 89999999999987777889999988999999999999999


Q ss_pred             HHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          231 ILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       231 ~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      ++.++.    +++++||+       ++|||+..
T Consensus       139 ~~~~~~----~~~ilRp~-------~v~G~~~~  160 (299)
T 1n2s_A          139 LQDNCP----KHLIFRTS-------WVYAGKGN  160 (299)
T ss_dssp             HHHHCS----SEEEEEEC-------SEECSSSC
T ss_pred             HHHhCC----CeEEEeee-------eecCCCcC
Confidence            999753    89999999       89998753

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.95  E-value=4.3e-27  Score=205.15  Aligned_cols=175  Identities=17%  Similarity=0.088  Sum_probs=133.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC-------CCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHH
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS-------RGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF  140 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~  140 (267)
                      ..+|+||||||+||||+++|++|+++|++|++++|+.       +..+...+..+++...+.++.++.+|++|.++++++
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            3349999999999999999999999999999999751       113333344444433456889999999999999988


Q ss_pred             hhc-----CCCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHH----HHHHHHHcC------CCEEEEEecccccc
Q 024488          141 FSE-----NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLV----VLESMARHG------VDTLIYSSTCATYG  201 (267)
Q Consensus       141 ~~~-----~~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~----~l~~~~~~~------~~~iV~vSS~~~~g  201 (267)
                      ++.     +++|+||||||+.......+    ..+..++.|+.++..    +++.|.+.+      .++||++||.+.+.
T Consensus       105 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~  184 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ  184 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHH
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHcc
Confidence            876     68999999999875544333    334456677777544    445554432      26999999987763


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          202 EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       202 ~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                                 +.++...|++||++++.+++.++.|   .|+++++|+|| +.|..
T Consensus       185 -----------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~  228 (322)
T 3qlj_A          185 -----------GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRM  228 (322)
T ss_dssp             -----------CBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCC
T ss_pred             -----------CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCcc
Confidence                       4456789999999999999999998   68999999999 76643

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.95  E-value=4.5e-27  Score=204.11  Aligned_cols=163  Identities=17%  Similarity=0.231  Sum_probs=139.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||+|+||++++++|+++|++|++++|+.                       .+|++|.+++.++++..++|+||
T Consensus         4 ~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-----------------------~~D~~d~~~~~~~~~~~~~d~vi   60 (321)
T 1e6u_A            4 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------------ELNLLDSRAVHDFFASERIDQVY   60 (321)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-----------------------cCCccCHHHHHHHHHhcCCCEEE
Confidence            7899999999999999999999999999877521                       27999999999988755789999


Q ss_pred             EccccCCc-CCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCC----CCCCC-ChHHHHH
Q 024488          151 HFAAVAYV-GESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET----PQAPI-NPYGKAK  224 (267)
Q Consensus       151 ~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~----~~~~~-~~Y~~sK  224 (267)
                      |+|+.... .....++++.++.|+.++.++++++.+.+.++||++||.++|+.....+++|+.    +..+. +.|+.+|
T Consensus        61 h~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK  140 (321)
T 1e6u_A           61 LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAK  140 (321)
T ss_dssp             ECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHH
T ss_pred             EcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHH
Confidence            99997531 112346677889999999999999999888999999999999876666778876    44443 5999999


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          225 KMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       225 ~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      .++|.+++.++++++++++++||+       ++|||+..
T Consensus       141 ~~~E~~~~~~~~~~~~~~~ilrp~-------~v~G~~~~  172 (321)
T 1e6u_A          141 IAGIKLCESYNRQYGRDYRSVMPT-------NLYGPHDN  172 (321)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEEC-------EEESTTCC
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEeC-------CcCCcCCC
Confidence            999999999998889999999999       99999865

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.95  E-value=1.9e-26  Score=197.23  Aligned_cols=171  Identities=15%  Similarity=0.064  Sum_probs=131.5

Q ss_pred             CCCcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc--
Q 024488           68 EGVTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (267)
Q Consensus        68 ~~~k~vlVTGas--ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--  143 (267)
                      ..+|+||||||+  +|||+++|++|+++|++|++++|+.  .++..+.+.+   ...++.++.+|++|.+++++++++  
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~   98 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCA---EFNPAAVLPCDVISDQEIKDLFVELG   98 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHG---GGCCSEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHH---hcCCceEEEeecCCHHHHHHHHHHHH
Confidence            334999999999  6699999999999999999999754  2222222222   234588999999999999998876  


Q ss_pred             ---CCCCEEEEccccCCcC---------CCccChHHHHHHhHHHHHHHHH----HHHHcCCCEEEEEeccccccCCCCCC
Q 024488          144 ---NAFDAVMHFAAVAYVG---------ESTLDPLKYYHNITSNTLVVLE----SMARHGVDTLIYSSTCATYGEPEKMP  207 (267)
Q Consensus       144 ---~~~D~li~~Ag~~~~~---------~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~iV~vSS~~~~g~~~~~~  207 (267)
                         +++|+||||||+....         ...+..+..++.|+.++..++.    .|.+. .++||++||.+.+.      
T Consensus        99 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~------  171 (280)
T 3nrc_A           99 KVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEK------  171 (280)
T ss_dssp             HHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTS------
T ss_pred             HHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEecccccc------
Confidence               6899999999986531         1223334456777777555444    44434 68999999988773      


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          208 ITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       208 ~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                           +.++...|++||++++.+++.++.|   .|+++++|+||+|.|...
T Consensus       172 -----~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  217 (280)
T 3nrc_A          172 -----AMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAA  217 (280)
T ss_dssp             -----CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGG
T ss_pred             -----CCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhh
Confidence                 5566789999999999999999988   689999999998887543

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.95  E-value=8.5e-27  Score=197.91  Aligned_cols=170  Identities=15%  Similarity=0.070  Sum_probs=130.5

Q ss_pred             CcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGas--ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      .|+||||||+  ||||++++++|+++|++|++++|+.+..+.+.+..++    .+.+.++.+|++|.++++++++.    
T Consensus        14 ~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   89 (271)
T 3ek2_A           14 GKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAE----FGSELVFPCDVADDAQIDALFASLKTH   89 (271)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH----TTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHH----cCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            4999999999  9999999999999999999999764333222222222    23588999999999999998876    


Q ss_pred             -CCCCEEEEccccCCc----CC-----CccChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYV----GE-----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEE  211 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~----~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~  211 (267)
                       +++|+||||||+...    ..     ..++.+..++.|+.++..++..+...  ..++||++||.+.+.          
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----------  159 (271)
T 3ek2_A           90 WDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER----------  159 (271)
T ss_dssp             CSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTS----------
T ss_pred             cCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecccccc----------
Confidence             689999999998653    22     22233455667777777777776543  246999999988763          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                       +.++...|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       160 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  204 (271)
T 3ek2_A          160 -AIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLA  204 (271)
T ss_dssp             -BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC----
T ss_pred             -CCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchh
Confidence             4566889999999999999999988   58999999999888754

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.94  E-value=9.5e-27  Score=203.51  Aligned_cols=172  Identities=16%  Similarity=0.115  Sum_probs=132.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEe-cCCCCCcchhhhhhhcCCCCCceEEEEccCCCHH-------------
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK-------------  135 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-------------  135 (267)
                      +|++|||||+||||++++++|+++|++|++++ |+....+++.+.+++  ..+.++.++.+|++|.+             
T Consensus        46 ~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           46 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNA--RRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH--HSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh--hcCCeEEEEEeeCCCchhcccccccccccc
Confidence            48999999999999999999999999999999 754322222222221  12457899999999999             


Q ss_pred             ----HHHHHhhc-----CCCCEEEEccccCCcCCCccCh------------------HHHHHHhHHHH----HHHHHHHH
Q 024488          136 ----AVNKFFSE-----NAFDAVMHFAAVAYVGESTLDP------------------LKYYHNITSNT----LVVLESMA  184 (267)
Q Consensus       136 ----~v~~~~~~-----~~~D~li~~Ag~~~~~~~~~~~------------------~~~~~~~~~~~----~~~l~~~~  184 (267)
                          +++++++.     +++|+||||||+....+..+..                  +..++.|+.++    +.+++.|.
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~  203 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  203 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                89888875     6899999999986544332222                  33456666664    45667777


Q ss_pred             HcC------CCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          185 RHG------VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       185 ~~~------~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +++      .++||++||.+.+.           +.++...|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       204 ~~~~~~~~~~g~IV~isS~~~~~-----------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~  271 (328)
T 2qhx_A          204 GTPAKHRGTNYSIINMVDAMTNQ-----------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD  271 (328)
T ss_dssp             HSCGGGSCSCEEEEEECCTTTTS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC
T ss_pred             hcCCcCCCCCcEEEEECchhhcc-----------CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc
Confidence            766      68999999988763           4556789999999999999999988   48999999999888765

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.94  E-value=2.5e-26  Score=196.90  Aligned_cols=170  Identities=14%  Similarity=0.049  Sum_probs=130.8

Q ss_pred             CcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGas--ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +|++|||||+  ||||++++++|+++|++|++++|+.. .++..+.+.+.   .+.+.++.+|++|.++++++++.    
T Consensus        21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (285)
T 2p91_A           21 GKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKG---FGSDLVVKCDVSLDEDIKNLKKFLEEN   96 (285)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHh---cCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4899999999  99999999999999999999997542 11222222221   12377899999999999988875    


Q ss_pred             -CCCCEEEEccccCCc----CC----CccChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEEeccccccCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYV----GE----STLDPLKYYHNITSNTLVVLESMARH---GVDTLIYSSTCATYGEPEKMPITEE  211 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~----~~----~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~iV~vSS~~~~g~~~~~~~~e~  211 (267)
                       +++|+||||||+...    .+    ..+..+..++.|+.++..++..+.+.   +.++||++||.+.+.          
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~----------  166 (285)
T 2p91_A           97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEK----------  166 (285)
T ss_dssp             TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTS----------
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhcc----------
Confidence             689999999998643    22    22334456778888877766665543   348999999987763          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                       +.++...|+.||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       167 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  211 (285)
T 2p91_A          167 -VVPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLA  211 (285)
T ss_dssp             -BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSC
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCch
Confidence             4456789999999999999999988   58999999999777754

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.94  E-value=1.4e-26  Score=199.39  Aligned_cols=171  Identities=14%  Similarity=0.058  Sum_probs=130.1

Q ss_pred             CCcEEEEEcCCCh--hHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           69 GVTHVLVTGGAGY--IGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        69 ~~k~vlVTGasgg--IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      .+|++|||||+|+  ||+++|++|+++|++|++++|+....+.+.+..++    .+++.++.+|++|.+++++++++   
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEE----LGAFVAGHCDVADAASIDAVFETLEK  105 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHH----HTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh----cCCceEEECCCCCHHHHHHHHHHHHH
Confidence            3499999999965  99999999999999999999753222222222222    23688999999999999998876   


Q ss_pred             --CCCCEEEEccccCCc----CC----CccChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYV----GE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEE  211 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~----~~----~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~  211 (267)
                        +++|+||||||+...    ..    ..+..+..++.|+.++..++..+.+.  ..++||++||.+.+.          
T Consensus       106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~----------  175 (293)
T 3grk_A          106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEK----------  175 (293)
T ss_dssp             HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTS----------
T ss_pred             hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhcc----------
Confidence              689999999998642    22    22333455677777766666655442  257999999988773          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                       +.+....|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       176 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  220 (293)
T 3grk_A          176 -VMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLA  220 (293)
T ss_dssp             -BCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchh
Confidence             4556889999999999999999988   58999999999888754

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.94  E-value=8e-27  Score=200.05  Aligned_cols=155  Identities=24%  Similarity=0.272  Sum_probs=135.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      .++||||||+|+||++++++|+++|++|++++|.                        .+|++|.+++.++++..++|+|
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------------~~Dl~d~~~~~~~~~~~~~d~v   67 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ------------------------DLDITNVLAVNKFFNEKKPNVV   67 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT------------------------TCCTTCHHHHHHHHHHHCCSEE
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc------------------------cCCCCCHHHHHHHHHhcCCCEE
Confidence            3899999999999999999999999999999862                        2799999999998875468999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (267)
                      ||+||.........++++.++.|+.++.++++++.+.+. +||++||.++|+.....+++|+.+..+.+.|+.+|.++|.
T Consensus        68 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~  146 (292)
T 1vl0_A           68 INCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGEN  146 (292)
T ss_dssp             EECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             EECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHH
Confidence            999997543223456778889999999999999998886 9999999999987776788999988889999999999999


Q ss_pred             HHHHhhhcCCCcEEEEeccccccccceeecC
Q 024488          230 IILDFSKNSDMAVMILRLVVFFTLVAFVIKI  260 (267)
Q Consensus       230 l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp  260 (267)
                      +++.++.    +++++||+       ++|||
T Consensus       147 ~~~~~~~----~~~~lR~~-------~v~G~  166 (292)
T 1vl0_A          147 FVKALNP----KYYIVRTA-------WLYGD  166 (292)
T ss_dssp             HHHHHCS----SEEEEEEC-------SEESS
T ss_pred             HHHhhCC----CeEEEeee-------eeeCC
Confidence            9999753    68999999       88888

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.94  E-value=1.5e-26  Score=197.24  Aligned_cols=170  Identities=14%  Similarity=0.052  Sum_probs=132.6

Q ss_pred             CcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGas--ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +|+++||||+  ||||++++++|+++|++|++++|+.. .++..+.+.+.   .+.+.++.+|++|.++++++++.    
T Consensus         6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQE---LNSPYVYELDVSKEEHFKSLYNSVKKD   81 (275)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHh---cCCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4899999999  99999999999999999999997653 22222222221   12478899999999999988875    


Q ss_pred             -CCCCEEEEccccCCc----CC----CccChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYV----GE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~----~~----~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                       +++|+||||||+...    .+    ..+..+..++.|+.++..++..+.+.  ..++||++||.+.+.           
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------  150 (275)
T 2pd4_A           82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK-----------  150 (275)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-----------
T ss_pred             cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcC-----------
Confidence             589999999998643    22    22334456778888888877776654  237999999977763           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +.++...|++||++.+.+++.++.|   .|+++++|+||+|.|..
T Consensus       151 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  195 (275)
T 2pd4_A          151 YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLA  195 (275)
T ss_dssp             BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccch
Confidence            4455778999999999999999988   48999999999888754

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.94  E-value=6.1e-27  Score=198.63  Aligned_cols=167  Identities=22%  Similarity=0.218  Sum_probs=128.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||+||||++++++|+++|++|++++|+.   +.+.+..+++   ..++.++.+|++|.+++++++++     +
T Consensus         6 ~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (263)
T 2a4k_A            6 GKTILVTGAASGIGRAALDLFAREGASLVAVDREE---RLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEFG   79 (263)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999999643   3333333333   24688999999999999988875     6


Q ss_pred             CCCEEEEccccCCcCCCccCh----HHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~  218 (267)
                      ++|+||||||+.......+.+    +..++.|+.++..++..+.+.  ..++||++||.+.++            .++..
T Consensus        80 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------------~~~~~  147 (263)
T 2a4k_A           80 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLG------------AFGLA  147 (263)
T ss_dssp             CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCC------------HHHHH
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcC------------CCCcH
Confidence            899999999986544433322    345667777766655554432  257999999988762            23367


Q ss_pred             hHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          219 PYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       219 ~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .|+.||++.+.+++.++.|   .|+++++|+||+|.|..
T Consensus       148 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  186 (263)
T 2a4k_A          148 HYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPM  186 (263)
T ss_dssp             HHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCch
Confidence            8999999999999999987   58999999999888754

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.94  E-value=1.1e-26  Score=194.37  Aligned_cols=169  Identities=14%  Similarity=0.092  Sum_probs=130.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEE-ecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIV-DNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      |+++||||+||||++++++|+++|++|+++ +|+....+...+.+++   .+.++.++.+|++|.+++++++++     +
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA---YGGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---HTCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh---cCCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            899999999999999999999999999995 5533222222222222   245788999999999999998875     5


Q ss_pred             CCCEEEEccccCCcCCC----ccChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~----~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||.......    .+..++.++.|+.++.+    +++.|.+++.++||++||.+.+.           +.++
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  147 (244)
T 1edo_A           79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI-----------GNIG  147 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------CCTT
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcC-----------CCCC
Confidence            89999999998654332    23334566778777544    55666666778999999987653           3445


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      ...|+.||++.+.+++.+++|   .|+++++++||+|.|.
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  187 (244)
T 1edo_A          148 QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASD  187 (244)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSH
T ss_pred             CccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccc
Confidence            789999999999999999987   5899999999977764

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.94  E-value=1e-26  Score=193.74  Aligned_cols=159  Identities=18%  Similarity=0.191  Sum_probs=126.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCce-EEEEccCCCHHHHHHHhhcCCC
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRL-QFIYADLGDAKAVNKFFSENAF  146 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~v~~~~~~~~~  146 (267)
                      ..+|+|+|||||||||++++++|+++|++|++++|+...   ..+ +.+     .++ +++.+|++  +++.+++.  ++
T Consensus        19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~---~~~-~~~-----~~~~~~~~~Dl~--~~~~~~~~--~~   85 (236)
T 3e8x_A           19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQ---GPE-LRE-----RGASDIVVANLE--EDFSHAFA--SI   85 (236)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGG---HHH-HHH-----TTCSEEEECCTT--SCCGGGGT--TC
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHH---HHH-HHh-----CCCceEEEcccH--HHHHHHHc--CC
Confidence            334899999999999999999999999999999975432   211 111     257 88999999  66666666  89


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHH
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKM  226 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a  226 (267)
                      |+||||||...    ....+..++.|+.++.++++++.+.+.++||++||.+.+..       +..+ .+...|+.+|.+
T Consensus        86 D~vi~~ag~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~~~-~~~~~Y~~sK~~  153 (236)
T 3e8x_A           86 DAVVFAAGSGP----HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-------DQGP-MNMRHYLVAKRL  153 (236)
T ss_dssp             SEEEECCCCCT----TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-------GGSC-GGGHHHHHHHHH
T ss_pred             CEEEECCCCCC----CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-------CCCh-hhhhhHHHHHHH
Confidence            99999999753    24677889999999999999999999899999999655421       1111 467899999999


Q ss_pred             HHHHHHHhhhcCCCcEEEEeccccccccceeecCCC
Q 024488          227 AEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       227 ~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      +|.+++    +.+++++++|||       .+|||..
T Consensus       154 ~e~~~~----~~gi~~~~lrpg-------~v~~~~~  178 (236)
T 3e8x_A          154 ADDELK----RSSLDYTIVRPG-------PLSNEES  178 (236)
T ss_dssp             HHHHHH----HSSSEEEEEEEC-------SEECSCC
T ss_pred             HHHHHH----HCCCCEEEEeCC-------cccCCCC
Confidence            999987    389999999999       6666543

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.94  E-value=2e-26  Score=195.40  Aligned_cols=172  Identities=15%  Similarity=0.063  Sum_probs=132.6

Q ss_pred             CcEEEEEcCCCh--hHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGAGY--IGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGasgg--IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +|++|||||+|+  ||+++|++|+++|++|++++|+.+..+...+..++..  ..++.++.+|++|.+++++++++    
T Consensus         7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (266)
T 3oig_A            7 GRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLD--RNDSIILPCDVTNDAEIETCFASIKEQ   84 (266)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSS--SCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcC--CCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            399999999955  9999999999999999999976433333333333321  23789999999999999998876    


Q ss_pred             -CCCCEEEEccccCCc----CCC----ccChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYV----GES----TLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~----~~~----~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                       +++|+||||||+...    ...    .+..+..++.|+.++..++..+...  ..++||++||.+.+.           
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------  153 (266)
T 3oig_A           85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGEL-----------  153 (266)
T ss_dssp             HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS-----------
T ss_pred             hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccc-----------
Confidence             689999999998642    222    2233445667777777777666543  247999999988763           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +.+....|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       154 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  198 (266)
T 3oig_A          154 VMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLS  198 (266)
T ss_dssp             CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGG
T ss_pred             cCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccc
Confidence            4556789999999999999999988   58999999999888743

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.94  E-value=3.7e-27  Score=194.18  Aligned_cols=159  Identities=13%  Similarity=0.145  Sum_probs=130.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC-HHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~D~l  149 (267)
                      |+|+||||+|+||++++++|+++|++|++++|+....+.           ..+++++.+|++| .++++++++  ++|+|
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-----------~~~~~~~~~D~~d~~~~~~~~~~--~~d~v   67 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ-----------YNNVKAVHFDVDWTPEEMAKQLH--GMDAI   67 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC-----------CTTEEEEECCTTSCHHHHHTTTT--TCSEE
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh-----------cCCceEEEecccCCHHHHHHHHc--CCCEE
Confidence            379999999999999999999999999999975432211           1478999999999 999999998  89999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (267)
                      |||||....        +.++.|+.++.++++++.+.+.++||++||.++++..   +..| .+..+.+.|+.+|.++|.
T Consensus        68 i~~ag~~~~--------~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~~~e-~~~~~~~~Y~~sK~~~e~  135 (219)
T 3dqp_A           68 INVSGSGGK--------SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---KWIG-AGFDALKDYYIAKHFADL  135 (219)
T ss_dssp             EECCCCTTS--------SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---GCCS-HHHHHTHHHHHHHHHHHH
T ss_pred             EECCcCCCC--------CcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---cccc-cccccccHHHHHHHHHHH
Confidence            999997542        2556788899999999999988999999998777422   2333 334457899999999999


Q ss_pred             HHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          230 IILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       230 l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      +++   ++.+++++++||+       ++|||...+
T Consensus       136 ~~~---~~~~i~~~ilrp~-------~v~g~~~~~  160 (219)
T 3dqp_A          136 YLT---KETNLDYTIIQPG-------ALTEEEATG  160 (219)
T ss_dssp             HHH---HSCCCEEEEEEEC-------SEECSCCCS
T ss_pred             HHH---hccCCcEEEEeCc-------eEecCCCCC
Confidence            987   4589999999999       777776543

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.94  E-value=1.8e-26  Score=219.29  Aligned_cols=177  Identities=21%  Similarity=0.318  Sum_probs=146.6

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHH-HHHHhhcCCC
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKA-VNKFFSENAF  146 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-v~~~~~~~~~  146 (267)
                      .+|+||||||+|+||++++++|+++ |++|++++|+....+.       .. ...+++++.+|++|.++ ++++++  ++
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~-------~~-~~~~v~~v~~Dl~d~~~~~~~~~~--~~  383 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR-------FL-NHPHFHFVEGDISIHSEWIEYHVK--KC  383 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGG-------GT-TCTTEEEEECCTTTCHHHHHHHHH--HC
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhh-------hc-cCCceEEEECCCCCcHHHHHHhhc--CC
Confidence            4589999999999999999999998 8999999975433211       11 13468899999998765 777887  78


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC-------CCCCh
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-------APINP  219 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~-------~~~~~  219 (267)
                      |+|||+||.........++++.++.|+.++.++++++.+.+ ++||++||.++|+.....+++|+.+.       .+.+.
T Consensus       384 D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~  462 (660)
T 1z7e_A          384 DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWI  462 (660)
T ss_dssp             SEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHH
T ss_pred             CEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCC
Confidence            99999999764333345677888999999999999999888 89999999999987766677887652       45568


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          220 YGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       220 Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      |+.||.++|.+++.++++.+++++++||+       ++|||+..
T Consensus       463 Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg-------~v~Gp~~~  499 (660)
T 1z7e_A          463 YSVSKQLLDRVIWAYGEKEGLQFTLFRPF-------NWMGPRLD  499 (660)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEEC-------SEESTTSS
T ss_pred             cHHHHHHHHHHHHHHHHHcCCCEEEECCC-------cccCCCcc
Confidence            99999999999999988889999999999       99998764

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.94  E-value=1.1e-26  Score=195.71  Aligned_cols=172  Identities=16%  Similarity=0.135  Sum_probs=129.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC-CCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL-SRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      +|+|+||||+||||++++++|+++|++|++++|+ ....   .+..+++...+.++.++.+|++|.+++++++++     
T Consensus         7 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            7 GKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANI---DETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTH---HHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhH---HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3899999999999999999999999999999975 3332   222222222245789999999999999988875     


Q ss_pred             CCCCEEEEcccc-CCcCCCcc----ChHHHHHHhHHHHHH----HHHHHHHcC--C---CEEEEEeccccccCCCCCCCC
Q 024488          144 NAFDAVMHFAAV-AYVGESTL----DPLKYYHNITSNTLV----VLESMARHG--V---DTLIYSSTCATYGEPEKMPIT  209 (267)
Q Consensus       144 ~~~D~li~~Ag~-~~~~~~~~----~~~~~~~~~~~~~~~----~l~~~~~~~--~---~~iV~vSS~~~~g~~~~~~~~  209 (267)
                      +++|+||||||. ....+..+    ..+..++.|+.++..    +++.|.+.+  .   ++||++||...+..       
T Consensus        84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-------  156 (258)
T 3afn_B           84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG-------  156 (258)
T ss_dssp             SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC-------
T ss_pred             CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC-------
Confidence            589999999997 43332222    234456677777554    555665443  3   79999999877631       


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          210 EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       210 e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                         +.++...|+.||++.+.+++.++.+   .|+++++++||+|.|..
T Consensus       157 ---~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~  201 (258)
T 3afn_B          157 ---GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAF  201 (258)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGG
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccc
Confidence               2345779999999999999999887   48999999999776643

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.94  E-value=1.1e-26  Score=197.34  Aligned_cols=172  Identities=19%  Similarity=0.127  Sum_probs=132.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+||||||+||||++++++|+++|++|++++|.  +.+...+..+++...+.++.++.+|++|.+++++++++     +
T Consensus        21 ~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~--~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (274)
T 1ja9_A           21 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGS--SSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   98 (274)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC--chHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999999972  22233232233322345788999999999999988875     5


Q ss_pred             CCCEEEEccccCCcCCC----ccChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccc-cCCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATY-GEPEKMPITEETPQAPI  217 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~-g~~~~~~~~e~~~~~~~  217 (267)
                      ++|+||||||.......    .+..+..++.|+.++.+++..+.+.  ..++||++||.+.+ .           +.++.
T Consensus        99 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~  167 (274)
T 1ja9_A           99 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMT-----------GIPNH  167 (274)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCC-----------SCCSC
T ss_pred             CCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccC-----------CCCCC
Confidence            89999999998654332    2233556778888888876666543  12799999998886 3           23456


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..|+.||++.+.+++.++.+   .++++++++||.|.+..
T Consensus       168 ~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~  207 (274)
T 1ja9_A          168 ALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDM  207 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence            78999999999999999988   48999999999887743

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.94  E-value=4e-26  Score=191.10  Aligned_cols=175  Identities=17%  Similarity=0.145  Sum_probs=129.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +|+|+||||+||||++++++|+++|  ++|++++|+....+    .+.+.  .+.++.++.+|++|.++++++++.    
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~----~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKAT----ELKSI--KDSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCH----HHHTC--CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHH----HHHhc--cCCceEEEEeecCCHHHHHHHHHHHHHh
Confidence            3899999999999999999999999  99999997543332    22222  245789999999999999988875    


Q ss_pred             -C--CCCEEEEccccCC-cCCCc----cChHHHHHHhHHHHHH----HHHHHHHc------C-----CCEEEEEeccccc
Q 024488          144 -N--AFDAVMHFAAVAY-VGEST----LDPLKYYHNITSNTLV----VLESMARH------G-----VDTLIYSSTCATY  200 (267)
Q Consensus       144 -~--~~D~li~~Ag~~~-~~~~~----~~~~~~~~~~~~~~~~----~l~~~~~~------~-----~~~iV~vSS~~~~  200 (267)
                       +  ++|+||||||... .....    +..+..++.|+.++..    +++.|.+.      +     .++||++||...+
T Consensus        77 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  156 (250)
T 1yo6_A           77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS  156 (250)
T ss_dssp             HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred             cCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccc
Confidence             3  8999999999865 33322    2334556677777554    55556555      5     6899999998776


Q ss_pred             cCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhcC---CCcEEEEecccccccc
Q 024488          201 GEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS---DMAVMILRLVVFFTLV  254 (267)
Q Consensus       201 g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e~---g~~~~~vrp~~v~~~~  254 (267)
                      ....    .+..+..+...|+.||++++.+++.++.++   |+++++|+||+|.|..
T Consensus       157 ~~~~----~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  209 (250)
T 1yo6_A          157 ITDN----TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL  209 (250)
T ss_dssp             STTC----CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----
T ss_pred             cCCc----ccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCC
Confidence            3211    011122567799999999999999999885   8999999999777644

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.94  E-value=2.7e-26  Score=194.06  Aligned_cols=179  Identities=13%  Similarity=0.093  Sum_probs=131.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+||||||+||||++++++|+++|++|++++|+....++..+.+.+.  .+.++.++.+|++|.++++++++.     +
T Consensus        14 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   91 (265)
T 1h5q_A           14 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKE--FGVKTKAYQCDVSNTDIVTKTIQQIDADLG   91 (265)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHH--HTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHh--cCCeeEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            389999999999999999999999999999997544332222222211  134788999999999999988875     5


Q ss_pred             CCCEEEEccccCCcCCCc----cChHHHHHHhHHHHHH----HHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLV----VLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~----~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||.....+..    +..+..++.|+.++..    +++.|.+++ .++||++||.+.+.....    ...+..
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~~~~  167 (265)
T 1h5q_A           92 PISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS----SLNGSL  167 (265)
T ss_dssp             SEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE----ETTEEC
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc----cccccc
Confidence            799999999986544322    2334456777777555    445555554 489999999877632110    011233


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...|+.||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       168 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  209 (265)
T 1h5q_A          168 TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQ  209 (265)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccc
Confidence            4778999999999999999987   48999999999887754

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.94  E-value=2.5e-26  Score=193.39  Aligned_cols=172  Identities=19%  Similarity=0.150  Sum_probs=135.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc------
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (267)
                      +|+++||||++|||++++++|+++|++|+++++  ++.+...+..+++...+.++.++.+|++|.++++++++.      
T Consensus         7 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            7 GKVALVTGASRGIGRAIAKRLANDGALVAIHYG--NRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES--SCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeC--CchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            499999999999999999999999999998754  333444444444444456789999999999999888765      


Q ss_pred             -----CCCCEEEEccccCCcCCCccCh----HHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCC
Q 024488          144 -----NAFDAVMHFAAVAYVGESTLDP----LKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       144 -----~~~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                           +++|+||||||+.......+.+    +..++.|+.++..++..+.+.  +.++||++||.+.+.           
T Consensus        85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~-----------  153 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI-----------  153 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTS-----------
T ss_pred             ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhcc-----------
Confidence                 2499999999986554433333    345667888877777776654  356999999988873           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +.+....|++||++.+.+++.++.|   .|+++++++||+|.|..
T Consensus       154 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  198 (255)
T 3icc_A          154 SLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDM  198 (255)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSS
T ss_pred             CCCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccc
Confidence            4556789999999999999999988   58999999999888754

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.94  E-value=5.6e-26  Score=192.72  Aligned_cols=175  Identities=14%  Similarity=0.022  Sum_probs=134.0

Q ss_pred             CcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCC-cchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGN-IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        70 ~k~vlVTGas--ggIG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +|+++||||+  +|||++++++|+++|++|++++|+.... ++..+.+.+.  .+.++.++++|++|.+++++++++   
T Consensus        20 ~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (267)
T 3gdg_A           20 GKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKT--YGIKAKAYKCQVDSYESCEKLVKDVVA   97 (267)
T ss_dssp             TCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHH--HCCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHh--cCCceeEEecCCCCHHHHHHHHHHHHH
Confidence            4999999999  9999999999999999999998754332 2222222221  145789999999999999998876   


Q ss_pred             --CCCCEEEEccccCCcCCCcc----ChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                        +++|+||||||+.......+    ..+..++.|+.++    +.++|.|.+.+.++||++||.+.+...         +
T Consensus        98 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~  168 (267)
T 3gdg_A           98 DFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIAN---------F  168 (267)
T ss_dssp             HTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC---------S
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccC---------C
Confidence              68999999999876544333    3344556676664    456677788888999999997775310         1


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhcCC--CcEEEEeccccccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKNSD--MAVMILRLVVFFTLVA  255 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e~g--~~~~~vrp~~v~~~~~  255 (267)
                      .++...|+.||++++.+++.++.|++  ++++.+.||+|.|.+.
T Consensus       169 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~  212 (267)
T 3gdg_A          169 PQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLS  212 (267)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCG
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchh
Confidence            23577899999999999999999843  8999999998887553

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.94  E-value=4e-26  Score=192.01  Aligned_cols=160  Identities=18%  Similarity=0.120  Sum_probs=124.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (267)
                      +|++|||||+||||++++++|+++|++|++++|+.       +.++++    +.+.++ +|+  .++++++++. .++|+
T Consensus        19 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~-------~~~~~~----~~~~~~-~D~--~~~~~~~~~~~~~iD~   84 (249)
T 1o5i_A           19 DKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE-------ELLKRS----GHRYVV-CDL--RKDLDLLFEKVKEVDI   84 (249)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH-------HHHHHT----CSEEEE-CCT--TTCHHHHHHHSCCCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH-------HHHHhh----CCeEEE-eeH--HHHHHHHHHHhcCCCE
Confidence            49999999999999999999999999999999743       112222    256677 999  4455666554 38999


Q ss_pred             EEEccccCCcCCCccC----hHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChH
Q 024488          149 VMHFAAVAYVGESTLD----PLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~----~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (267)
                      ||||||........+.    .+..++.|+.+    ++.+++.|.+++.++||++||.+.+.           +.++...|
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~Y  153 (249)
T 1o5i_A           85 LVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS-----------PIENLYTS  153 (249)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcC-----------CCCCCchH
Confidence            9999998654433332    33445566666    45678888888888999999998874           44567899


Q ss_pred             HHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          221 GKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       221 ~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +.||++.+.+++.++.|   .|+++++|+||+|.|..
T Consensus       154 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  190 (249)
T 1o5i_A          154 NSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETER  190 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCc
Confidence            99999999999999987   68999999999877754

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.94  E-value=6.1e-26  Score=192.32  Aligned_cols=176  Identities=13%  Similarity=0.123  Sum_probs=132.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC---CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDS---YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-  143 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-  143 (267)
                      ..+|+||||||+||||++++++|+++|   ++|++++|+....+.+.+ +.+   .+.++.++.+|++|.++++++++. 
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~-l~~---~~~~~~~~~~Dl~~~~~v~~~~~~~   94 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAK---NHSNIHILEIDLRNFDAYDKLVADI   94 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHH---HCTTEEEEECCTTCGGGHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHH-hhc---cCCceEEEEecCCChHHHHHHHHHH
Confidence            345999999999999999999999999   999999986554433222 222   145789999999999999988875 


Q ss_pred             ----C--CCCEEEEccccCC-cCC----CccChHHHHHHhHHHHHH----HHHHHHHc------C-----CCEEEEEecc
Q 024488          144 ----N--AFDAVMHFAAVAY-VGE----STLDPLKYYHNITSNTLV----VLESMARH------G-----VDTLIYSSTC  197 (267)
Q Consensus       144 ----~--~~D~li~~Ag~~~-~~~----~~~~~~~~~~~~~~~~~~----~l~~~~~~------~-----~~~iV~vSS~  197 (267)
                          +  ++|+||||||+.. ...    ..+..+..++.|+.++..    +++.|.+.      +     .++||++||.
T Consensus        95 ~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~  174 (267)
T 1sny_A           95 EGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSI  174 (267)
T ss_dssp             HHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCG
T ss_pred             HHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecc
Confidence                3  7999999999865 222    223334556777777555    45555544      3     5799999998


Q ss_pred             ccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          198 ATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       198 ~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      +.+....        +..+...|+.||++++.+++.++.+   .++++++|+||+|.|.+.
T Consensus       175 ~~~~~~~--------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  227 (267)
T 1sny_A          175 LGSIQGN--------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMG  227 (267)
T ss_dssp             GGCSTTC--------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTT
T ss_pred             cccccCC--------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCC
Confidence            8864211        1235678999999999999999988   689999999998887654

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.94  E-value=1.3e-26  Score=196.34  Aligned_cols=170  Identities=17%  Similarity=0.107  Sum_probs=131.7

Q ss_pred             CcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGas--ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +|++|||||+  ||||++++++|+++|++|++++|+.. .++..+.+.+.   .+.+.++.+|++|.+++++++++    
T Consensus         8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (261)
T 2wyu_A            8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEA---LGGALLFRADVTQDEELDALFAGVKEA   83 (261)
T ss_dssp             TCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHH---TTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHh---cCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            3899999999  99999999999999999999997542 11122222221   12478899999999999988875    


Q ss_pred             -CCCCEEEEccccCCc----CC----CccChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYV----GE----STLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~----~~----~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                       +++|+||||||+...    .+    ..+..+..++.|+.++..++..+.+.  ..++||++||.+.+.           
T Consensus        84 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------  152 (261)
T 2wyu_A           84 FGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK-----------  152 (261)
T ss_dssp             HSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS-----------
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccC-----------
Confidence             589999999998643    22    22334556778888888888777654  236999999977763           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +.++...|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       153 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  197 (261)
T 2wyu_A          153 VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVA  197 (261)
T ss_dssp             BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTG
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCch
Confidence            3455778999999999999999988   48999999999777754

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.94  E-value=2.4e-26  Score=192.36  Aligned_cols=161  Identities=16%  Similarity=0.162  Sum_probs=127.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc------
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (267)
                      +|++|||||+||||++++++|+++|++|++++|+....+             ....++.+|++|.+++++++++      
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~~D~~~~~~v~~~~~~~~~~~~   73 (241)
T 1dhr_A            7 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-------------SASVIVKMTDSFTEQADQVTAEVGKLLG   73 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-------------SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-------------CCcEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            489999999999999999999999999999997543211             1356788999999999988875      


Q ss_pred             -CCCCEEEEccccCCcCCC-ccC----hHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYVGES-TLD----PLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~~~-~~~----~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                       +++|+||||||+....+. .+.    .+..++.|+.++..++..+.+.  ..++||++||.+.+.           +.+
T Consensus        74 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  142 (241)
T 1dhr_A           74 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD-----------GTP  142 (241)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------CCT
T ss_pred             CCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHcc-----------CCC
Confidence             589999999998654333 232    3445567777766666655442  237999999988873           445


Q ss_pred             CCChHHHHHHHHHHHHHHhhhcC-----CCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKNS-----DMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e~-----g~~~~~vrp~~v~~~~  254 (267)
                      +...|+.||++++.+++.++.|+     |+++++|+||+|.|..
T Consensus       143 ~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~  186 (241)
T 1dhr_A          143 GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM  186 (241)
T ss_dssp             TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc
Confidence            67899999999999999999874     5999999999888754

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.94  E-value=1.7e-26  Score=195.18  Aligned_cols=173  Identities=13%  Similarity=0.072  Sum_probs=130.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHh---CCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLK---DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~---~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +|++|||||+||||++++++|++   +|++|++++|+....++..+.+++.. .+.++.++.+|++|+++++++++.   
T Consensus         6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (259)
T 1oaa_A            6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQ-PDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHC-TTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhC-CCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence            38999999999999999999999   89999999975433222222222211 134788999999999999888764   


Q ss_pred             ----CCCC--EEEEccccCCc--CCC-----ccChHHHHHHhHHHHHHHHHHH----HHc--CCCEEEEEeccccccCCC
Q 024488          144 ----NAFD--AVMHFAAVAYV--GES-----TLDPLKYYHNITSNTLVVLESM----ARH--GVDTLIYSSTCATYGEPE  204 (267)
Q Consensus       144 ----~~~D--~li~~Ag~~~~--~~~-----~~~~~~~~~~~~~~~~~~l~~~----~~~--~~~~iV~vSS~~~~g~~~  204 (267)
                          +++|  +||||||+...  .+.     .+..+..++.|+.++..++..+    .++  +.++||++||.+.+.   
T Consensus        85 ~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~---  161 (259)
T 1oaa_A           85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ---  161 (259)
T ss_dssp             SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS---
T ss_pred             ccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC---
Confidence                3678  99999998532  212     2334456677877766555544    444  457899999988873   


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhcC-CCcEEEEecccccccc
Q 024488          205 KMPITEETPQAPINPYGKAKKMAEDIILDFSKNS-DMAVMILRLVVFFTLV  254 (267)
Q Consensus       205 ~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e~-g~~~~~vrp~~v~~~~  254 (267)
                              +.++...|++||++++.+++.++.|+ ++++++|+||+|.|.+
T Consensus       162 --------~~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~  204 (259)
T 1oaa_A          162 --------PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM  204 (259)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH
T ss_pred             --------CCCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcch
Confidence                    45567899999999999999999985 4999999999988754

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.94  E-value=3.9e-26  Score=193.70  Aligned_cols=170  Identities=16%  Similarity=0.098  Sum_probs=132.1

Q ss_pred             CcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGas--ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +|++|||||+  ||||++++++|+++|++|++++|+. ..++..+.+.+.   .+...++++|++|.+++++++++    
T Consensus         9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            9 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQ---LGSDIVLQCDVAEDASIDTMFAELGKV   84 (265)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHh---cCCcEEEEccCCCHHHHHHHHHHHHHH
Confidence            3899999999  9999999999999999999999765 222222222221   12347899999999999988875    


Q ss_pred             -CCCCEEEEccccCCc----C-----CCccChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYV----G-----ESTLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEE  211 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~----~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~  211 (267)
                       +++|+||||||+...    .     ...+..+..++.|+.++..++..+.+.  ..++||++||.+.+.          
T Consensus        85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~----------  154 (265)
T 1qsg_A           85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER----------  154 (265)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS----------
T ss_pred             cCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhcc----------
Confidence             589999999998642    1     222344556778888888888777654  246999999987763          


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                       +.++...|+.||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       155 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  199 (265)
T 1qsg_A          155 -AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLA  199 (265)
T ss_dssp             -BCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTT
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccch
Confidence             4456789999999999999999988   48999999999777754

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=9e-26  Score=192.10  Aligned_cols=166  Identities=21%  Similarity=0.179  Sum_probs=127.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+.   +...+..+++    .++.++++|++|.+++++++++     +
T Consensus         9 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (270)
T 1yde_A            9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDE---SGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRFG   81 (270)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHh----cCCeEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999999643   2222222232    2478899999999999988875     6


Q ss_pred             CCCEEEEccccCCc-CCCc----cChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYV-GEST----LDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~-~~~~----~~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||.... ....    ++.+..++.|+.++..    +++.|.+. .++||++||.+.+.           +.+
T Consensus        82 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~-----------~~~  149 (270)
T 1yde_A           82 RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAI-----------GQA  149 (270)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHH-----------CCT
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccC-----------CCC
Confidence            89999999997542 2222    2234556677777555    45555544 58999999976542           334


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ....|+.||++.+.+++.++.|   +|+++++|+||+|+|..
T Consensus       150 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~  191 (270)
T 1yde_A          150 QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPL  191 (270)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccch
Confidence            5678999999999999999987   68999999999887753

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=1e-25  Score=194.56  Aligned_cols=172  Identities=13%  Similarity=0.104  Sum_probs=130.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcC--CCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF--PEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +|+|+||||+||||++++++|+++|++|++++|+....+...+.+++..  ..+.++.++.+|++|.++++++++.    
T Consensus        18 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   97 (303)
T 1yxm_A           18 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDT   97 (303)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHH
Confidence            3999999999999999999999999999999975433222222222211  1245789999999999999998875    


Q ss_pred             -CCCCEEEEccccCCcCCCc----cChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESMA----RHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~----~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                       +++|+||||||........    +..+..++.|+.++.+++..+.    +.+.++||++||.+.+            +.
T Consensus        98 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~------------~~  165 (303)
T 1yxm_A           98 FGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA------------GF  165 (303)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTT------------CC
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeeccc------------CC
Confidence             5799999999975433322    2334557788888777666543    3446899999997732            34


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhcC---CCcEEEEeccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKNS---DMAVMILRLVVFFTL  253 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e~---g~~~~~vrp~~v~~~  253 (267)
                      +....|+.+|++.+.+++.+++|+   |+++++|+||+|+|.
T Consensus       166 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  207 (303)
T 1yxm_A          166 PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQ  207 (303)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCT
T ss_pred             CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccc
Confidence            456789999999999999999984   899999999966654

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.94  E-value=3.6e-26  Score=190.64  Aligned_cols=161  Identities=18%  Similarity=0.204  Sum_probs=126.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc------
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (267)
                      +|++|||||+||||++++++|+++|++|++++|+....+             ....++.+|++|.+++++++++      
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~   69 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-------------DSNILVDGNKNWTEQEQSILEQTASSLQ   69 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-------------SEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-------------cccEEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            389999999999999999999999999999997543211             1356778999999999888774      


Q ss_pred             -CCCCEEEEccccCCcCCC-ccC----hHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYVGES-TLD----PLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~~~-~~~----~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                       +++|+||||||+....+. .+.    .+..++.|+.++..++..+.+.  ..++||++||.+.+.           +.+
T Consensus        70 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  138 (236)
T 1ooe_A           70 GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG-----------PTP  138 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------CCT
T ss_pred             CCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhcc-----------CCC
Confidence             489999999998654333 222    3445667777766666655542  246999999988873           455


Q ss_pred             CCChHHHHHHHHHHHHHHhhhcCC-----CcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKNSD-----MAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e~g-----~~~~~vrp~~v~~~~  254 (267)
                      +...|+.||++.+.+++.++.|++     +++++|+||+|.|..
T Consensus       139 ~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~  182 (236)
T 1ooe_A          139 SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM  182 (236)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc
Confidence            678999999999999999998854     999999999888754

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.94  E-value=1.1e-25  Score=189.55  Aligned_cols=160  Identities=14%  Similarity=0.130  Sum_probs=127.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+||||||+||||+++|++|+++|++|++++|+....               ....+.+|++|.++++++++.     +
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~---------------~~~~~~~d~~d~~~v~~~~~~~~~~~g   86 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN---------------ADHSFTIKDSGEEEIKSVIEKINSKSI   86 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT---------------SSEEEECSCSSHHHHHHHHHHHHTTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc---------------cccceEEEeCCHHHHHHHHHHHHHHcC
Confidence            38999999999999999999999999999999754321               123478999999999988876     5


Q ss_pred             CCCEEEEccccCCcCC-Cc----cChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGE-ST----LDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~-~~----~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      ++|+||||||+..... ..    +..+..++.|+.++..++..+.+.  ..++||++||.+.+.           +.++.
T Consensus        87 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  155 (251)
T 3orf_A           87 KVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALN-----------RTSGM  155 (251)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------CCTTB
T ss_pred             CCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhcc-----------CCCCC
Confidence            8999999999864432 22    233455677888877777666543  246999999988773           45667


Q ss_pred             ChHHHHHHHHHHHHHHhhhc-----CCCcEEEEeccccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN-----SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e-----~g~~~~~vrp~~v~~~~~  255 (267)
                      ..|+.||++++.+++.++.|     .++++++|+||+|.|...
T Consensus       156 ~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~  198 (251)
T 3orf_A          156 IAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTN  198 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcch
Confidence            89999999999999999998     479999999998887543

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.94  E-value=9.8e-26  Score=192.73  Aligned_cols=169  Identities=18%  Similarity=0.182  Sum_probs=131.0

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----C
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----N  144 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~  144 (267)
                      .+|++|||||+||||+++|++|+++|++|++++|+.   +.+.+..+++   +.++.++.+|++|.++++++++.    +
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~---~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAA---EKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAANQLG  102 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHTTSS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCh---HHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            349999999999999999999999999999999643   3333433444   45789999999999999988875    5


Q ss_pred             CCCEEEEc-cccCCcCCC------c---cChHHHHHHhHHHHHH----HHHHHHH------cCCCEEEEEeccccccCCC
Q 024488          145 AFDAVMHF-AAVAYVGES------T---LDPLKYYHNITSNTLV----VLESMAR------HGVDTLIYSSTCATYGEPE  204 (267)
Q Consensus       145 ~~D~li~~-Ag~~~~~~~------~---~~~~~~~~~~~~~~~~----~l~~~~~------~~~~~iV~vSS~~~~g~~~  204 (267)
                      ++|+|||| ||.......      .   +..+..++.|+.++.+    +++.+.+      .+.++||++||.+.+.   
T Consensus       103 ~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---  179 (281)
T 3ppi_A          103 RLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE---  179 (281)
T ss_dssp             EEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS---
T ss_pred             CCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC---
Confidence            89999999 555433221      1   1235566677777554    5555554      3567999999988873   


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          205 KMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       205 ~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                              +.++...|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       180 --------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  224 (281)
T 3ppi_A          180 --------GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPI  224 (281)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             --------CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchh
Confidence                    4556889999999999999999998   58999999999888743

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.94  E-value=1.9e-25  Score=191.41  Aligned_cols=171  Identities=16%  Similarity=0.138  Sum_probs=129.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+|+||||+||||++++++|+++|++|++++|+....++..+.+.+.  ...++.++.+|++|.++++++++.     +
T Consensus        28 ~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  105 (286)
T 1xu9_A           28 GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL--GAASAHYIAGTMEDMTFAEQFVAQAGKLMG  105 (286)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--TCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh--CCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            489999999999999999999999999999997543332222222222  123688999999999999988875     6


Q ss_pred             CCCEEEEc-cccCCcCCCc---cChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHF-AAVAYVGEST---LDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~-Ag~~~~~~~~---~~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+|||| ||........   +..+..++.|+.++..    +++.|.+. .++||++||.+.+.           +.++
T Consensus       106 ~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~-----------~~~~  173 (286)
T 1xu9_A          106 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKV-----------AYPM  173 (286)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTS-----------CCTT
T ss_pred             CCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCccccc-----------CCCC
Confidence            89999999 5765332222   2234456777777554    55555544 47999999988763           4456


Q ss_pred             CChHHHHHHHHHHHHHHhhhcC-----CCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKNS-----DMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e~-----g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.||++++.+++.++.|+     ++++++++||+|.|..
T Consensus       174 ~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~  216 (286)
T 1xu9_A          174 VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET  216 (286)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh
Confidence            7899999999999999998764     8999999999888754

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.94  E-value=2.8e-26  Score=193.31  Aligned_cols=166  Identities=11%  Similarity=0.026  Sum_probs=124.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc--CCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--NAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--~~~D  147 (267)
                      ||+||||||+||||++++++|+++|++|++++|+....+   +            . +.+|++|.+++++++++  +++|
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---~------------~-~~~Dl~~~~~v~~~~~~~~~~id   64 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI---A------------D-LSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE---C------------C-TTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc---c------------c-cccCCCCHHHHHHHHHHhCCCCC
Confidence            589999999999999999999999999999997543211   0            1 57899999999999875  4789


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCC------------
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEE------------  211 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~------------  211 (267)
                      +||||||+...   ....+..++.|+.++..    ++|.|.+++.++||++||.+.+......+..+.            
T Consensus        65 ~lv~~Ag~~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (257)
T 1fjh_A           65 GLVLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARA  141 (257)
T ss_dssp             EEEECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHH
T ss_pred             EEEECCCCCCC---cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhh
Confidence            99999997641   13367788888888555    556666677789999999988732110000000            


Q ss_pred             -----CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          212 -----TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       212 -----~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                           .+.++...|+.||++.+.+++.++.|   .|+++++|+||+|.|..
T Consensus       142 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  192 (257)
T 1fjh_A          142 IVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPL  192 (257)
T ss_dssp             HHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----
T ss_pred             hhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcc
Confidence                 13335678999999999999999988   68999999999888754

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.94  E-value=1.3e-25  Score=189.35  Aligned_cols=164  Identities=16%  Similarity=0.161  Sum_probs=118.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHH-Hhhc-CCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK-FFSE-NAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~-~~~~-~~~D  147 (267)
                      ||++|||||+||||++++++|+++|++|++++|+....+...+ +++.   +.++..+  |..+.+.+-+ +.+. +++|
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~---~~~~~~~--d~~~v~~~~~~~~~~~g~iD   74 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET---YPQLKPM--SEQEPAELIEAVTSAYGQVD   74 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH---CTTSEEC--CCCSHHHHHHHHHHHHSCCC
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc---CCcEEEE--CHHHHHHHHHHHHHHhCCCC
Confidence            5899999999999999999999999999999975443332222 2222   2344443  5555443322 2222 6899


Q ss_pred             EEEEccccC-CcCCCcc----ChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCC
Q 024488          148 AVMHFAAVA-YVGESTL----DPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (267)
Q Consensus       148 ~li~~Ag~~-~~~~~~~----~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~  218 (267)
                      +||||||+. ...+..+    ..+..++.|+.++    +.++|.|.+++.++||++||.+.+.           +.++..
T Consensus        75 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~  143 (254)
T 1zmt_A           75 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG-----------PWKELS  143 (254)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS-----------CCTTCH
T ss_pred             EEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCccccc-----------CCCCch
Confidence            999999986 4333222    2344556676664    4467777777788999999987763           445678


Q ss_pred             hHHHHHHHHHHHHHHhhhc---CCCcEEEEecccc
Q 024488          219 PYGKAKKMAEDIILDFSKN---SDMAVMILRLVVF  250 (267)
Q Consensus       219 ~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v  250 (267)
                      .|+.||++++.+++.++.|   .|+++++|+||+|
T Consensus       144 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v  178 (254)
T 1zmt_A          144 TYTSARAGACTLANALSKELGEYNIPVFAIGPNYL  178 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSB
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcc
Confidence            9999999999999999988   5899999999966

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.94  E-value=5.8e-26  Score=192.68  Aligned_cols=182  Identities=17%  Similarity=0.101  Sum_probs=135.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHh-CCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      +|+||||||+||||++++++|++ +|++|++++|+...   ..+..+++...+.++.++.+|++|.++++++++.     
T Consensus         4 ~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (276)
T 1wma_A            4 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTR---GQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY   80 (276)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHH---HHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHH---HHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence            48999999999999999999999 99999999975432   2232333322245788999999999999988875     


Q ss_pred             CCCCEEEEccccCCcCCC----ccChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccC-CC----------CC
Q 024488          144 NAFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGE-PE----------KM  206 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~-~~----------~~  206 (267)
                      +++|+||||||+......    .+..+..++.|+.++..++..+.+.  ..++||++||.+.+.. ..          ..
T Consensus        81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~  160 (276)
T 1wma_A           81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSE  160 (276)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred             CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccc
Confidence            589999999998644332    2334566788999998888888765  2369999999877631 00          00


Q ss_pred             CCCCC-------------------CCCCCCChHHHHHHHHHHHHHHhhhc-------CCCcEEEEecccccccc
Q 024488          207 PITEE-------------------TPQAPINPYGKAKKMAEDIILDFSKN-------SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       207 ~~~e~-------------------~~~~~~~~Y~~sK~a~e~l~~~~a~e-------~g~~~~~vrp~~v~~~~  254 (267)
                      +++|+                   .+..+...|+.||++++.+++.++.+       .++++++|+||+|.|.+
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~  234 (276)
T 1wma_A          161 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM  234 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred             ccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCc
Confidence            11111                   11223489999999999999999887       48999999999777754

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.93  E-value=9.2e-26  Score=189.11  Aligned_cols=161  Identities=16%  Similarity=0.169  Sum_probs=129.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHh-CCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---CC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NA  145 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~~  145 (267)
                      ||++|||||+||||++++++|++ .|++|++++|.....             ...+.++.+|++|.++++++++.   ++
T Consensus         4 ~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   70 (244)
T 4e4y_A            4 MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-------------AENLKFIKADLTKQQDITNVLDIIKNVS   70 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-------------CTTEEEEECCTTCHHHHHHHHHHTTTCC
T ss_pred             CCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-------------cccceEEecCcCCHHHHHHHHHHHHhCC
Confidence            58999999999999999999999 799999988643211             23568899999999999998864   58


Q ss_pred             CCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHHHHHHHHHcC--CCEEEEEeccccccCCCCCCCCCCCCCCCCCh
Q 024488          146 FDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLVVLESMARHG--VDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~--~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~  219 (267)
                      +|+||||||+.......+    ..+..++.|+.++..++..+.+.-  .++||++||.+.+.           +.++...
T Consensus        71 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~~~~~  139 (244)
T 4e4y_A           71 FDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFI-----------AKPNSFA  139 (244)
T ss_dssp             EEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTC-----------CCTTBHH
T ss_pred             CCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHcc-----------CCCCCch
Confidence            999999999865544333    334456778888777777765431  36999999988873           4556789


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          220 YGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       220 Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      |+.||++++.+++.++.|   +|+++++|+||+|.|..
T Consensus       140 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  177 (244)
T 4e4y_A          140 YTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDL  177 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchh
Confidence            999999999999999986   68999999999887743

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.93  E-value=4.5e-26  Score=205.84  Aligned_cols=181  Identities=20%  Similarity=0.222  Sum_probs=137.2

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcc---hhhhhhhcC------CCCCceEEEEccCCCHHHHH
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIG---AVKVLQELF------PEPGRLQFIYADLGDAKAVN  138 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~---~~~~~~~~~------~~~~~~~~~~~Dl~d~~~v~  138 (267)
                      ..+|+||||||+|+||++++++|++.|++|++++|+....+.   +.+.+++..      ....++.++.+|++|.+++.
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  146 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  146 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence            345899999999999999999999999999999986542212   222222110      01357899999999988877


Q ss_pred             HHhhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccC-----CCCCCCCCCCC
Q 024488          139 KFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGE-----PEKMPITEETP  213 (267)
Q Consensus       139 ~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~-----~~~~~~~e~~~  213 (267)
                       .+  .++|+||||||....   ..+.+..++.|+.++.++++++.+ +.++||++||.++ |.     ....+++|+++
T Consensus       147 -~~--~~~d~Vih~A~~~~~---~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~  218 (427)
T 4f6c_A          147 -LP--ENMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADV  218 (427)
T ss_dssp             -CS--SCCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEECTTCS
T ss_pred             -Cc--CCCCEEEECCcccCC---CCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCcccccccc
Confidence             33  489999999997632   345577889999999999999998 7789999999888 53     23456777766


Q ss_pred             ---CCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          214 ---QAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       214 ---~~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                         ..+.+.|+.||+++|.+++.+++ .|++++++|||       ++|||+..+
T Consensus       219 ~~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg-------~v~G~~~~~  264 (427)
T 4f6c_A          219 YKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVG-------NLTSPYNGR  264 (427)
T ss_dssp             CSSCCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEEC-------CEESCSSSC
T ss_pred             ccCCCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCC-------eeecCCCCC
Confidence               45789999999999999999875 79999999999       999987665

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.93  E-value=1.2e-25  Score=187.62  Aligned_cols=153  Identities=12%  Similarity=0.048  Sum_probs=126.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      |+|+||||+||||++++++|+++|+  +|++++|+....+...         ...+.++.+|++|.++++++++  ++|+
T Consensus        19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~--~~d~   87 (242)
T 2bka_A           19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA---------YKNVNQEVVDFEKLDDYASAFQ--GHDV   87 (242)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG---------GGGCEEEECCGGGGGGGGGGGS--SCSE
T ss_pred             CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc---------cCCceEEecCcCCHHHHHHHhc--CCCE
Confidence            8999999999999999999999999  9999998654332111         1257889999999999999988  8999


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (267)
                      ||||||.....   ...+..++.|+.++.++++.+.+.+.++||++||.++|+.             +...|+.+|+++|
T Consensus        88 vi~~ag~~~~~---~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~-------------~~~~Y~~sK~~~e  151 (242)
T 2bka_A           88 GFCCLGTTRGK---AGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS-------------SNFLYLQVKGEVE  151 (242)
T ss_dssp             EEECCCCCHHH---HHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHH
T ss_pred             EEECCCccccc---CCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC-------------CcchHHHHHHHHH
Confidence            99999965321   2346678889999999999999988899999999988741             3568999999999


Q ss_pred             HHHHHhhhcCCC-cEEEEeccccccccceeecCC
Q 024488          229 DIILDFSKNSDM-AVMILRLVVFFTLVAFVIKIN  261 (267)
Q Consensus       229 ~l~~~~a~e~g~-~~~~vrp~~v~~~~~~~~Gp~  261 (267)
                      .+++.    .++ +++++|||       .+|||+
T Consensus       152 ~~~~~----~~~~~~~~vrpg-------~v~~~~  174 (242)
T 2bka_A          152 AKVEE----LKFDRYSVFRPG-------VLLCDR  174 (242)
T ss_dssp             HHHHT----TCCSEEEEEECC-------EEECTT
T ss_pred             HHHHh----cCCCCeEEEcCc-------eecCCC
Confidence            99887    466 69999999       777764

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.93  E-value=3.7e-26  Score=188.43  Aligned_cols=162  Identities=12%  Similarity=0.029  Sum_probs=124.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||||+||++++++|+++|++|++++|+..   ...    ++.  ..+++++.+|++|.++  +.+.  ++|+||
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~---~~~----~~~--~~~~~~~~~D~~d~~~--~~~~--~~d~vi   67 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQ---KAA----DRL--GATVATLVKEPLVLTE--ADLD--SVDAVV   67 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHH----HHT--CTTSEEEECCGGGCCH--HHHT--TCSEEE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccc---ccc----ccc--CCCceEEecccccccH--hhcc--cCCEEE
Confidence            36999999999999999999999999999997432   211    111  2468899999999887  5555  899999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCC-CC--CCCCCCCCCCCCChHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP-EK--MPITEETPQAPINPYGKAKKMA  227 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~-~~--~~~~e~~~~~~~~~Y~~sK~a~  227 (267)
                      ||||.....       .....|+.++++++++|.+.+ ++||++||.+.+... ..  .+.++.....+.+.|+.+|.+.
T Consensus        68 ~~ag~~~~~-------~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~  139 (224)
T 3h2s_A           68 DALSVPWGS-------GRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQY  139 (224)
T ss_dssp             ECCCCCTTS-------SCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHH
T ss_pred             ECCccCCCc-------chhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHH
Confidence            999976211       124568899999999999988 999999998665432 22  2333444444578999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEeccccccccceeecCC
Q 024488          228 EDIILDFSKNSDMAVMILRLVVFFTLVAFVIKIN  261 (267)
Q Consensus       228 e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~  261 (267)
                      |.+ +.+.++.+++++++||+       .+|||+
T Consensus       140 e~~-~~~~~~~~i~~~ivrp~-------~v~g~~  165 (224)
T 3h2s_A          140 YEY-QFLQMNANVNWIGISPS-------EAFPSG  165 (224)
T ss_dssp             HHH-HHHTTCTTSCEEEEEEC-------SBCCCC
T ss_pred             HHH-HHHHhcCCCcEEEEcCc-------cccCCC
Confidence            954 55666789999999999       677664

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.93  E-value=2.1e-26  Score=187.80  Aligned_cols=163  Identities=17%  Similarity=0.162  Sum_probs=131.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~l  149 (267)
                      |+++||||+||||++++++|+++  +|++++|+.   +...+..+++.    . .++.+|++|++++++++++ +++|+|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~---~~~~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~id~v   70 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRA---GALAELAREVG----A-RALPADLADELEAKALLEEAGPLDLL   70 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCH---HHHHHHHHHHT----C-EECCCCTTSHHHHHHHHHHHCSEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCH---HHHHHHHHhcc----C-cEEEeeCCCHHHHHHHHHhcCCCCEE
Confidence            57999999999999999999998  999998643   23333223331    1 7889999999999999875 679999


Q ss_pred             EEccccCCcCC----CccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHH
Q 024488          150 MHFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKK  225 (267)
Q Consensus       150 i~~Ag~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~  225 (267)
                      |||||......    ..+..+..++.|+.++..++..+.+.+.++||++||.+.+.           +.++...|+.+|+
T Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~Y~~sK~  139 (207)
T 2yut_A           71 VHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYV-----------QVPGFAAYAAAKG  139 (207)
T ss_dssp             EECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHH-----------SSTTBHHHHHHHH
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhcc-----------CCCCcchHHHHHH
Confidence            99999864433    23445667888999999999998666678999999998874           4556789999999


Q ss_pred             HHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          226 MAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       226 a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +.+.+++.++.+   .|++++++|||.+++..
T Consensus       140 a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~  171 (207)
T 2yut_A          140 ALEAYLEAARKELLREGVHLVLVRLPAVATGL  171 (207)
T ss_dssp             HHHHHHHHHHHHHHTTTCEEEEECCCCBCSGG
T ss_pred             HHHHHHHHHHHHHhhhCCEEEEEecCcccCCC
Confidence            999999999988   69999999999666643

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.93  E-value=2.1e-25  Score=181.40  Aligned_cols=152  Identities=12%  Similarity=0.090  Sum_probs=123.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~l  149 (267)
                      ++++||||+||||++++++|+ +|++|++++|+..                    .+.+|++|+++++++++. +++|+|
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~--------------------~~~~D~~~~~~~~~~~~~~~~~d~v   62 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG--------------------DVTVDITNIDSIKKMYEQVGKVDAI   62 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS--------------------SEECCTTCHHHHHHHHHHHCCEEEE
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc--------------------ceeeecCCHHHHHHHHHHhCCCCEE
Confidence            479999999999999999999 9999999997431                    368999999999999876 579999


Q ss_pred             EEccccCCcCCCcc----ChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHH
Q 024488          150 MHFAAVAYVGESTL----DPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKA  223 (267)
Q Consensus       150 i~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~s  223 (267)
                      |||||.....+..+    ..++.++.|+.++.+++..+.+.  ..++||++||.+.+.           +.++...|+.+
T Consensus        63 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~Y~~s  131 (202)
T 3d7l_A           63 VSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMED-----------PIVQGASAAMA  131 (202)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTS-----------CCTTCHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcC-----------CCCccHHHHHH
Confidence            99999764443322    22345577888888888887665  137999999987763           45567899999


Q ss_pred             HHHHHHHHHHhhhcC--CCcEEEEecccccccc
Q 024488          224 KKMAEDIILDFSKNS--DMAVMILRLVVFFTLV  254 (267)
Q Consensus       224 K~a~e~l~~~~a~e~--g~~~~~vrp~~v~~~~  254 (267)
                      |++.|.+++.++.|.  +++++++|||.+++..
T Consensus       132 K~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~  164 (202)
T 3d7l_A          132 NGAVTAFAKSAAIEMPRGIRINTVSPNVLEESW  164 (202)
T ss_dssp             HHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGH
T ss_pred             HHHHHHHHHHHHHHccCCeEEEEEecCccCCch
Confidence            999999999999874  9999999999666643

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.93  E-value=2.7e-25  Score=188.99  Aligned_cols=168  Identities=13%  Similarity=0.060  Sum_probs=129.0

Q ss_pred             CcEEEEEcC--CChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGa--sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +|+++||||  +||||++++++|+++|++|++++|+...  ...+..+++   +.++.++.+|++|++++++++++    
T Consensus         7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (269)
T 2h7i_A            7 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLR--LIQRITDRL---PAKAPLLELDVQNEEHLASLAGRVTEA   81 (269)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHH--HHHHHHTTS---SSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHH--HHHHHHHhc---CCCceEEEccCCCHHHHHHHHHHHHHH
Confidence            389999999  9999999999999999999999964321  112222222   34678899999999999998875    


Q ss_pred             -C---CCCEEEEccccCC-----cCCCc----cChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCC
Q 024488          144 -N---AFDAVMHFAAVAY-----VGEST----LDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPI  208 (267)
Q Consensus       144 -~---~~D~li~~Ag~~~-----~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~  208 (267)
                       +   ++|+||||||+..     ..+..    +..+..++.|+.++..++..+.+.  ..++||++||.+.+        
T Consensus        82 ~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~--------  153 (269)
T 2h7i_A           82 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR--------  153 (269)
T ss_dssp             HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS--------
T ss_pred             hCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccc--------
Confidence             4   8999999999864     12222    223345667787877777766543  23699999997654        


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          209 TEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                          +.+....|+.||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       154 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  198 (269)
T 2h7i_A          154 ----AMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLA  198 (269)
T ss_dssp             ----CCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHH
T ss_pred             ----ccCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchh
Confidence                3445789999999999999999988   58999999999998853

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.93  E-value=6.4e-26  Score=190.39  Aligned_cols=165  Identities=13%  Similarity=0.053  Sum_probs=126.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc--CCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--NAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--~~~D  147 (267)
                      ||+||||||+||||++++++|+++|++|++++|+....+          .      .+.+|++|.+++++++++  +++|
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------~------~~~~D~~~~~~~~~~~~~~~~~~d   64 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE----------A------DLSTPGGRETAVAAVLDRCGGVLD   64 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE----------C------CTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc----------c------cccCCcccHHHHHHHHHHcCCCcc
Confidence            589999999999999999999999999999997543211          0      156899999999998875  4899


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEEeccccccCCCCCC-C-------CCCC---
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESM----ARHGVDTLIYSSTCATYGEPEKMP-I-------TEET---  212 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~iV~vSS~~~~g~~~~~~-~-------~e~~---  212 (267)
                      +||||||....   ....+..++.|+.++.+++..+    .+.+.++||++||.++|+.....+ .       +|+.   
T Consensus        65 ~vi~~Ag~~~~---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (255)
T 2dkn_A           65 GLVCCAGVGVT---AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIE  141 (255)
T ss_dssp             EEEECCCCCTT---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHH
T ss_pred             EEEECCCCCCc---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhh
Confidence            99999997542   3456788899999987766654    444668999999999986321100 0       0000   


Q ss_pred             ----CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          213 ----PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       213 ----~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                          ..++...|+.||+++|.+++.++++   .|++++++|||.|++.
T Consensus       142 ~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~  189 (255)
T 2dkn_A          142 LAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETP  189 (255)
T ss_dssp             HHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSH
T ss_pred             hccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccch
Confidence                0135678999999999999999987   7999999999966663

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.93  E-value=1.3e-25  Score=185.66  Aligned_cols=151  Identities=18%  Similarity=0.139  Sum_probs=123.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (267)
                      +|++|||||+||||++++++|+++|++|++++|+..                       +|++|++++++++++ +++|+
T Consensus         6 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-----------------------~D~~~~~~v~~~~~~~g~id~   62 (223)
T 3uce_A            6 KTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-----------------------LDISDEKSVYHYFETIGAFDH   62 (223)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-----------------------CCTTCHHHHHHHHHHHCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-----------------------cCCCCHHHHHHHHHHhCCCCE
Confidence            489999999999999999999999999999986321                       899999999999987 78999


Q ss_pred             EEEccccC-CcCCCc----cChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCCCCChHH
Q 024488          149 VMHFAAVA-YVGEST----LDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYG  221 (267)
Q Consensus       149 li~~Ag~~-~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~  221 (267)
                      ||||||.. ...+..    +..+..++.|+.++..++..+.+.  ..++||++||.+.+.           +.++...|+
T Consensus        63 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~~~~~Y~  131 (223)
T 3uce_A           63 LIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRK-----------VVANTYVKA  131 (223)
T ss_dssp             EEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTS-----------CCTTCHHHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhcc-----------CCCCchHHH
Confidence            99999986 333322    233445677888877777776553  246999999988873           456678999


Q ss_pred             HHHHHHHHHHHHhhhcCC-CcEEEEecccccccc
Q 024488          222 KAKKMAEDIILDFSKNSD-MAVMILRLVVFFTLV  254 (267)
Q Consensus       222 ~sK~a~e~l~~~~a~e~g-~~~~~vrp~~v~~~~  254 (267)
                      .||++.+.+++.++.|++ +++++|+||+|.|..
T Consensus       132 asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~  165 (223)
T 3uce_A          132 AINAAIEATTKVLAKELAPIRVNAISPGLTKTEA  165 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGG
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchh
Confidence            999999999999999954 999999999887754

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.93  E-value=6.3e-25  Score=187.68  Aligned_cols=154  Identities=17%  Similarity=0.195  Sum_probs=126.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      ||+|||||| |+||++++++|+++|++|++++|+..+.    +.+..     .+++++.+|++|.+     ++  ++|+|
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~-----~~~~~~~~D~~d~~-----~~--~~d~v   67 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQM----EAIRA-----SGAEPLLWPGEEPS-----LD--GVTHL   67 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGH----HHHHH-----TTEEEEESSSSCCC-----CT--TCCEE
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhh----hhHhh-----CCCeEEEecccccc-----cC--CCCEE
Confidence            489999998 9999999999999999999999754321    11111     36889999999954     33  79999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHH--cCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR--HGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (267)
                      ||+|+.....    .         ..+.++++++.+  .+.++||++||.++||.....+++|+.+..+.+.|+.+|.++
T Consensus        68 i~~a~~~~~~----~---------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~  134 (286)
T 3ius_A           68 LISTAPDSGG----D---------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMA  134 (286)
T ss_dssp             EECCCCBTTB----C---------HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHH
T ss_pred             EECCCccccc----c---------HHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHH
Confidence            9999865321    1         124678888888  677899999999999988777899999999999999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          228 EDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       228 e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      |.+++.+   .+++++++||+       ++|||+..
T Consensus       135 E~~~~~~---~~~~~~ilRp~-------~v~G~~~~  160 (286)
T 3ius_A          135 EQQWQAV---PNLPLHVFRLA-------GIYGPGRG  160 (286)
T ss_dssp             HHHHHHS---TTCCEEEEEEC-------EEEBTTBS
T ss_pred             HHHHHhh---cCCCEEEEecc-------ceECCCch
Confidence            9999997   68999999999       88988743

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.93  E-value=5.3e-25  Score=183.59  Aligned_cols=157  Identities=22%  Similarity=0.230  Sum_probs=125.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----CCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NAF  146 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~~  146 (267)
                      |++|||||+||||++++++|+++|++|++++|+.. .              .++.++.+|++|.+++++++++    +++
T Consensus         3 k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~--------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   67 (242)
T 1uay_A            3 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G--------------EDLIYVEGDVTREEDVRRAVARAQEEAPL   67 (242)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S--------------SSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c--------------cceEEEeCCCCCHHHHHHHHHHHHhhCCc
Confidence            89999999999999999999999999999997542 1              1357899999999999988874    589


Q ss_pred             CEEEEccccCCcCCCcc--------ChHHHHHHhHHHHHHHHHHHH----HcC---C---CEEEEEeccccccCCCCCCC
Q 024488          147 DAVMHFAAVAYVGESTL--------DPLKYYHNITSNTLVVLESMA----RHG---V---DTLIYSSTCATYGEPEKMPI  208 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~~----~~~---~---~~iV~vSS~~~~g~~~~~~~  208 (267)
                      |+||||||........+        ..+..++.|+.++..++..+.    +.+   .   ++||++||.+.+.       
T Consensus        68 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-------  140 (242)
T 1uay_A           68 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE-------  140 (242)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH-------
T ss_pred             eEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc-------
Confidence            99999999865433221        445667788888766655544    332   2   3999999998874       


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          209 TEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                          +.++...|+.||++.+.+++.++.|   .|+++++|+||+|+|.
T Consensus       141 ----~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~  184 (242)
T 1uay_A          141 ----GQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTP  184 (242)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSH
T ss_pred             ----CCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcch
Confidence                3456789999999999999999987   4899999999977764

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.93  E-value=3.9e-25  Score=192.49  Aligned_cols=167  Identities=18%  Similarity=0.127  Sum_probs=125.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC------CCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL------SRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~------~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~  143 (267)
                      +|++|||||+||||++++++|+++|++|+++++.      .++.+...+..+++...+..   ..+|++|.++++++++.
T Consensus         9 gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~---~~~D~~~~~~~~~~~~~   85 (319)
T 1gz6_A            9 GRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK---AVANYDSVEAGEKLVKT   85 (319)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE---EEEECCCGGGHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCe---EEEeCCCHHHHHHHHHH
Confidence            4999999999999999999999999999998753      22333333333333222222   35899999887777654


Q ss_pred             -----CCCCEEEEccccCCcCCC----ccChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCC
Q 024488          144 -----NAFDAVMHFAAVAYVGES----TLDPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       144 -----~~~D~li~~Ag~~~~~~~----~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                           +++|+||||||+....+.    .+..+..++.|+.+    ++.++|.|++++.++||++||.+.+.         
T Consensus        86 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~---------  156 (319)
T 1gz6_A           86 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY---------  156 (319)
T ss_dssp             HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH---------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc---------
Confidence                 689999999998654432    23344566778777    45567777777788999999975542         


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVF  250 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v  250 (267)
                        +.++...|++||++.+.+++.++.|   .|+++++|+||++
T Consensus       157 --~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~  197 (319)
T 1gz6_A          157 --GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG  197 (319)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc
Confidence              2335779999999999999999988   5899999999976

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.92  E-value=2.9e-24  Score=177.04  Aligned_cols=153  Identities=15%  Similarity=0.198  Sum_probs=117.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHH-hCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLL-KDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      ||+|+||||+||||++++++|+ ++|++|++++|+...  .+.+ +.   ....++.++.+|++|.++++++++  ++|+
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~--~~~~-~~---~~~~~~~~~~~D~~d~~~~~~~~~--~~d~   76 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKT--RIPP-EI---IDHERVTVIEGSFQNPGXLEQAVT--NAEV   76 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHH--HSCH-HH---HTSTTEEEEECCTTCHHHHHHHHT--TCSE
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccc--cchh-hc---cCCCceEEEECCCCCHHHHHHHHc--CCCE
Confidence            4779999999999999999999 899999999975320  1111 11   123578999999999999999998  8999


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCC-hHHHHHHHH
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN-PYGKAKKMA  227 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~-~Y~~sK~a~  227 (267)
                      ||||||..               |+. ++++++.|.+.+.++||++||.++|+..... ..+. ...... .|+.+|.++
T Consensus        77 vv~~ag~~---------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~-~~~~-~~~~~~~~y~~~K~~~  138 (221)
T 3r6d_A           77 VFVGAMES---------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVA-LEKW-TFDNLPISYVQGERQA  138 (221)
T ss_dssp             EEESCCCC---------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHH-HHHH-HHHTSCHHHHHHHHHH
T ss_pred             EEEcCCCC---------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcc-cccc-cccccccHHHHHHHHH
Confidence            99999853               233 8899999999988999999999988532110 0000 001123 899999999


Q ss_pred             HHHHHHhhhcCCCcEEEEecccccc
Q 024488          228 EDIILDFSKNSDMAVMILRLVVFFT  252 (267)
Q Consensus       228 e~l~~~~a~e~g~~~~~vrp~~v~~  252 (267)
                      |.+++.    .++++++||||+|++
T Consensus       139 e~~~~~----~~i~~~~vrpg~v~~  159 (221)
T 3r6d_A          139 RNVLRE----SNLNYTILRLTWLYN  159 (221)
T ss_dssp             HHHHHH----SCSEEEEEEECEEEC
T ss_pred             HHHHHh----CCCCEEEEechhhcC
Confidence            998875    799999999995544

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.92  E-value=4e-25  Score=185.29  Aligned_cols=164  Identities=18%  Similarity=0.124  Sum_probs=108.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHH---hhc-CC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF---FSE-NA  145 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~---~~~-~~  145 (267)
                      +|++|||||+||||+++|++|++ |++|++++|+.   +...+ +.+    ..++.++.+|+++.++.+.+   ++. ++
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~---~~~~~-~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (245)
T 3e9n_A            5 KKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNP---EHLAA-LAE----IEGVEPIESDIVKEVLEEGGVDKLKNLDH   75 (245)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCH---HHHHH-HHT----STTEEEEECCHHHHHHTSSSCGGGTTCSC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCH---HHHHH-HHh----hcCCcceecccchHHHHHHHHHHHHhcCC
Confidence            38999999999999999999988 99999999643   22222 222    23688899999988653222   222 58


Q ss_pred             CCEEEEccccCCcCCCccCh----HHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~----~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|+||||||+.......+..    +..++.|+.+    ++.++|.|.+.+ ++||++||.+.+.           +.++.
T Consensus        76 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~-----------~~~~~  143 (245)
T 3e9n_A           76 VDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNG-----------PHPGN  143 (245)
T ss_dssp             CSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC---------------------C
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCccccc-----------CCCCc
Confidence            99999999987655443333    3445667766    555777776665 8999999988874           45567


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..|++||++++.+++.++.|   .|+++++|+||+|.|..
T Consensus       144 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  183 (245)
T 3e9n_A          144 TIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPM  183 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCch
Confidence            89999999999999999987   68999999999887754

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.92  E-value=7.9e-25  Score=183.47  Aligned_cols=166  Identities=13%  Similarity=0.118  Sum_probs=118.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEE-e--cCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHH-HHHhhc-C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIV-D--NLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAV-NKFFSE-N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v-~~~~~~-~  144 (267)
                      +|++|||||+||||++++++|+++|++|+++ +  |+..   .+.+..+++  .  .....  |..+.+.+ +++.+. +
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~---~~~~~~~~~--~--~~~~~--~~~~v~~~~~~~~~~~g   71 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAA---ERQRFESEN--P--GTIAL--AEQKPERLVDATLQHGE   71 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHH---HHHHHHHHS--T--TEEEC--CCCCGGGHHHHHGGGSS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHH---HHHHHHHHh--C--CCccc--CHHHHHHHHHHHHHHcC
Confidence            3899999999999999999999999999998 5  6432   222222232  1  12211  44333322 222222 6


Q ss_pred             CCCEEEEccccCCc---CCCccC----hHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYV---GESTLD----PLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       145 ~~D~li~~Ag~~~~---~~~~~~----~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                      ++|+||||||+...   .+..+.    .+..++.|+.++    +.++|.|.+++.++||++||.+.+.           +
T Consensus        72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~  140 (244)
T 1zmo_A           72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKK-----------P  140 (244)
T ss_dssp             CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------C
T ss_pred             CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCC-----------C
Confidence            89999999998654   333333    334556666664    4567777777788999999988773           4


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      .++...|+.||++++.++++++.|   .|+++++|+||+|.|.+.
T Consensus       141 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  185 (244)
T 1zmo_A          141 LAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTY  185 (244)
T ss_dssp             CTTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTT
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcc
Confidence            456789999999999999999988   589999999998888653

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.92  E-value=4e-24  Score=173.61  Aligned_cols=151  Identities=16%  Similarity=0.223  Sum_probs=122.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+|+||||+|+||++++++|+++|++|++++|+....+.       .  ...+++++.+|++|.+++.++++  ++|+||
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-------~--~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi   72 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-------E--GPRPAHVVVGDVLQAADVDKTVA--GQDAVI   72 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-------S--SCCCSEEEESCTTSHHHHHHHHT--TCSEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc-------c--cCCceEEEEecCCCHHHHHHHHc--CCCEEE
Confidence            789999999999999999999999999999975432211       1  13468899999999999999998  789999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (267)
                      |+||.....    ++   .+.|+.++.++++++.+.+.++||++||.++|+.....       ..+...|+.+|.++|.+
T Consensus        73 ~~a~~~~~~----~~---~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~-------~~~~~~y~~~K~~~e~~  138 (206)
T 1hdo_A           73 VLLGTRNDL----SP---TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV-------PPRLQAVTDDHIRMHKV  138 (206)
T ss_dssp             ECCCCTTCC----SC---CCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS-------CGGGHHHHHHHHHHHHH
T ss_pred             ECccCCCCC----Cc---cchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccc-------cccchhHHHHHHHHHHH
Confidence            999975331    11   23678889999999999888999999999998643211       11567899999999999


Q ss_pred             HHHhhhcCCCcEEEEecccc
Q 024488          231 ILDFSKNSDMAVMILRLVVF  250 (267)
Q Consensus       231 ~~~~a~e~g~~~~~vrp~~v  250 (267)
                      ++.    .+++++++||+.+
T Consensus       139 ~~~----~~i~~~~lrp~~~  154 (206)
T 1hdo_A          139 LRE----SGLKYVAVMPPHI  154 (206)
T ss_dssp             HHH----TCSEEEEECCSEE
T ss_pred             HHh----CCCCEEEEeCCcc
Confidence            864    7899999999944

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.92  E-value=6e-25  Score=180.57  Aligned_cols=160  Identities=10%  Similarity=0.076  Sum_probs=115.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+|+||||||+||++++++|+++|++|++++|+..   ..    +++.   .+++++.+|++|.++  +.+.  ++|+||
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~---~~----~~~~---~~~~~~~~D~~d~~~--~~~~--~~d~vi   66 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAG---KI----TQTH---KDINILQKDIFDLTL--SDLS--DQNVVV   66 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSH---HH----HHHC---SSSEEEECCGGGCCH--HHHT--TCSEEE
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCch---hh----hhcc---CCCeEEeccccChhh--hhhc--CCCEEE
Confidence            46999999999999999999999999999997532   21    2221   468899999999887  5555  799999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEecccccc-CCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYG-EPEKMPITEETPQAPINPYGKAKKMAED  229 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g-~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (267)
                      ||||....         ....++.++++++++|++.+.+++|++||.+++. .....+..|+.+..+.+.|+.+|.+.|.
T Consensus        67 ~~ag~~~~---------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~  137 (221)
T 3ew7_A           67 DAYGISPD---------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQ  137 (221)
T ss_dssp             ECCCSSTT---------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHH
T ss_pred             ECCcCCcc---------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHH
Confidence            99997421         1345788899999999998889999999987653 3333355666666778889999999999


Q ss_pred             HHHHhhh-cCCCcEEEEeccccccccceeecCC
Q 024488          230 IILDFSK-NSDMAVMILRLVVFFTLVAFVIKIN  261 (267)
Q Consensus       230 l~~~~a~-e~g~~~~~vrp~~v~~~~~~~~Gp~  261 (267)
                      + ..+.+ +.+++++++||+       ++|||+
T Consensus       138 ~-~~~~~~~~gi~~~ivrp~-------~v~g~~  162 (221)
T 3ew7_A          138 L-EHLKSHQAEFSWTYISPS-------AMFEPG  162 (221)
T ss_dssp             H-HHHHTTTTTSCEEEEECS-------SCCCCC
T ss_pred             H-HHHHhhccCccEEEEeCc-------ceecCC
Confidence            7 34444 689999999999       666663

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.92  E-value=1.2e-24  Score=184.60  Aligned_cols=154  Identities=23%  Similarity=0.236  Sum_probs=127.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+|+||||+||||++++++|++ |++|++++|+...        .     . +   +.+|++|.++++++++..++|+||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~--------~-----~-~---~~~Dl~~~~~~~~~~~~~~~d~vi   62 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI--------Q-----G-G---YKLDLTDFPRLEDFIIKKRPDVII   62 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC--------T-----T-C---EECCTTSHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC--------C-----C-C---ceeccCCHHHHHHHHHhcCCCEEE
Confidence            3699999999999999999995 8999999975421        0     1 1   789999999999998854599999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (267)
                      ||||.........+.+..++.|+.++.++++++.+.+. +||++||.++|+.... +++|+.+..+.+.|+.+|.++|.+
T Consensus        63 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~-~~~e~~~~~~~~~Y~~sK~~~e~~  140 (273)
T 2ggs_A           63 NAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKG-NYKEEDIPNPINYYGLSKLLGETF  140 (273)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSC-SBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred             ECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCC-CcCCCCCCCCCCHHHHHHHHHHHH
Confidence            99997643223456778889999999999999988775 9999999999975433 788888888889999999999999


Q ss_pred             HHHhhhcCCCcEEEEecccc
Q 024488          231 ILDFSKNSDMAVMILRLVVF  250 (267)
Q Consensus       231 ~~~~a~e~g~~~~~vrp~~v  250 (267)
                      ++.      ++++++||+.|
T Consensus       141 ~~~------~~~~~iR~~~v  154 (273)
T 2ggs_A          141 ALQ------DDSLIIRTSGI  154 (273)
T ss_dssp             HCC------TTCEEEEECCC
T ss_pred             HhC------CCeEEEecccc
Confidence            876      56799999933

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.92  E-value=1.5e-24  Score=181.44  Aligned_cols=162  Identities=17%  Similarity=0.191  Sum_probs=125.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      +|+|+||||+|+||++++++|+++  |++|++++|+..   ..    +++   ..++.++.+|++|.++++++++  ++|
T Consensus         4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~---~~----~~~---~~~~~~~~~D~~d~~~~~~~~~--~~d   71 (253)
T 1xq6_A            4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQ---GK----EKI---GGEADVFIGDITDADSINPAFQ--GID   71 (253)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHH---HH----HHT---TCCTTEEECCTTSHHHHHHHHT--TCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCC---ch----hhc---CCCeeEEEecCCCHHHHHHHHc--CCC
Confidence            489999999999999999999999  899999997432   11    111   2357789999999999999998  799


Q ss_pred             EEEEccccCCcCC------C-------ccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          148 AVMHFAAVAYVGE------S-------TLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       148 ~li~~Ag~~~~~~------~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      +||||||......      .       .+.....++.|+.++.++++++.+.+.++||++||.+++..        ..+.
T Consensus        72 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~--------~~~~  143 (253)
T 1xq6_A           72 ALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP--------DHPL  143 (253)
T ss_dssp             EEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT--------TCGG
T ss_pred             EEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCC--------CCcc
Confidence            9999999753211      0       11122457889999999999999988899999999887531        1122


Q ss_pred             CCC--ChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCC
Q 024488          215 API--NPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       215 ~~~--~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      .++  ..|+.+|.++|.+++.    .+++++++|||       .+|||..
T Consensus       144 ~~~~~~~y~~sK~~~e~~~~~----~~i~~~~vrpg-------~v~~~~~  182 (253)
T 1xq6_A          144 NKLGNGNILVWKRKAEQYLAD----SGTPYTIIRAG-------GLLDKEG  182 (253)
T ss_dssp             GGGGGCCHHHHHHHHHHHHHT----SSSCEEEEEEC-------EEECSCS
T ss_pred             ccccchhHHHHHHHHHHHHHh----CCCceEEEecc-------eeecCCc
Confidence            222  4588899999998865    79999999999       6676643

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.92  E-value=9.5e-24  Score=186.12  Aligned_cols=167  Identities=19%  Similarity=0.249  Sum_probs=138.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC-----CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS-----YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (267)
                      |+||||||||+||++++++|+++|     ++|++++|......        .  ...+++++.+|++|.+++.++++..+
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--------~--~~~~~~~~~~Dl~d~~~~~~~~~~~~   71 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--------H--EDNPINYVQCDISDPDDSQAKLSPLT   71 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--------C--CSSCCEEEECCTTSHHHHHHHHTTCT
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--------c--ccCceEEEEeecCCHHHHHHHHhcCC
Confidence            789999999999999999999999     99999998654321        0  12468899999999999999998433


Q ss_pred             -CCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHc--CCCEEE-------EEeccccccCC--CCCCCCCCCC
Q 024488          146 -FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH--GVDTLI-------YSSTCATYGEP--EKMPITEETP  213 (267)
Q Consensus       146 -~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV-------~vSS~~~~g~~--~~~~~~e~~~  213 (267)
                       +|+|||+||...     .++++.++.|+.++.++++++.+.  +.+++|       ++||.++||..  ...+++|+.+
T Consensus        72 ~~d~vih~a~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~  146 (364)
T 2v6g_A           72 DVTHVFYVTWANR-----STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLP  146 (364)
T ss_dssp             TCCEEEECCCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSC
T ss_pred             CCCEEEECCCCCc-----chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCcccc
Confidence             999999999652     356788999999999999999987  678997       79999999864  3457788876


Q ss_pred             CCC-CChHHHHHHHHHHHHHHhhhcCC-CcEEEEeccccccccceeecCCCC
Q 024488          214 QAP-INPYGKAKKMAEDIILDFSKNSD-MAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       214 ~~~-~~~Y~~sK~a~e~l~~~~a~e~g-~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      ..+ .+.|    .++|.+++.++++++ ++++++||+       ++|||+..
T Consensus       147 ~~~~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~-------~v~G~~~~  187 (364)
T 2v6g_A          147 RLKYMNFY----YDLEDIMLEEVEKKEGLTWSVHRPG-------NIFGFSPY  187 (364)
T ss_dssp             CCSSCCHH----HHHHHHHHHHHTTSTTCEEEEEEES-------SEECCCTT
T ss_pred             CCccchhh----HHHHHHHHHHhhcCCCceEEEECCC-------ceeCCCCC
Confidence            654 6678    458888888887777 999999999       99998764

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.92  E-value=5e-25  Score=203.27  Aligned_cols=181  Identities=20%  Similarity=0.226  Sum_probs=137.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcc---hhhhhhhcC------CCCCceEEEEccCCCHHHHH
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIG---AVKVLQELF------PEPGRLQFIYADLGDAKAVN  138 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~---~~~~~~~~~------~~~~~~~~~~~Dl~d~~~v~  138 (267)
                      ..+|+||||||||+||++++++|.+.|++|++++|.......   +.+.++...      ....+++++.+|++|.+++.
T Consensus       148 ~~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  227 (508)
T 4f6l_B          148 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  227 (508)
T ss_dssp             CCCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred             CCCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence            346899999999999999999999999999999986542211   112111110      11357999999999987777


Q ss_pred             HHhhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccC-----CCCCCCCCCCC
Q 024488          139 KFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGE-----PEKMPITEETP  213 (267)
Q Consensus       139 ~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~-----~~~~~~~e~~~  213 (267)
                       +.  .++|+|||+|+...   ........++.|+.++.++++++.+ +.++||++||.++ |.     ....+++|+++
T Consensus       228 -~~--~~~D~Vih~Aa~~~---~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~  299 (508)
T 4f6l_B          228 -LP--ENMDTIIHAGARTD---HFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADV  299 (508)
T ss_dssp             -CS--SCCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCT-TSEECTTCSCCEECTTCS
T ss_pred             -Cc--cCCCEEEECCceec---CCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhh-ccCCccCCcCcccccccc
Confidence             33  48999999999753   2334566788899999999999988 6789999999988 42     23446777765


Q ss_pred             ---CCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          214 ---QAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       214 ---~~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                         ..+.+.|+.+|.++|.+++.+++ .|++++++||+       ++|||+..+
T Consensus       300 ~~~~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~-------~v~G~~~~~  345 (508)
T 4f6l_B          300 YKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVG-------NLTSPYNGR  345 (508)
T ss_dssp             CSSBCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEEC-------CEESCSSSC
T ss_pred             cccccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecc-------eeccCCCCC
Confidence               34688999999999999999875 79999999999       999987654

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.92  E-value=5.5e-24  Score=193.38  Aligned_cols=169  Identities=14%  Similarity=0.037  Sum_probs=131.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||+||||++++++|+++|++|++++|+.. .+...+..++.     .+.++.+|++|.++++++++.     +
T Consensus       213 gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~-~~~l~~~~~~~-----~~~~~~~Dvtd~~~v~~~~~~~~~~~g  286 (454)
T 3u0b_A          213 GKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGA-AEDLKRVADKV-----GGTALTLDVTADDAVDKITAHVTEHHG  286 (454)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGG-HHHHHHHHHHH-----TCEEEECCTTSTTHHHHHHHHHHHHST
T ss_pred             CCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCcc-HHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHHcC
Confidence            499999999999999999999999999999987431 22233333332     356899999999999988875     3


Q ss_pred             C-CCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHHHHHHHHHc----CCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 A-FDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLVVLESMARH----GVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~-~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~----~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      + +|+||||||+.......+    ..+..++.|+.++.++...+...    +.++||++||.+.+.           +.+
T Consensus       287 ~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~-----------g~~  355 (454)
T 3u0b_A          287 GKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIA-----------GNR  355 (454)
T ss_dssp             TCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHH-----------CCT
T ss_pred             CCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCC-----------CCC
Confidence            4 999999999876544333    33445667888877777776654    678999999987763           345


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ....|+++|++.+.|+++++.|   .|+++++|+||+|.|.+.
T Consensus       356 g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  398 (454)
T 3u0b_A          356 GQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMT  398 (454)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC---
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhh
Confidence            5789999999999999999987   689999999998888553

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.91  E-value=1.6e-24  Score=177.40  Aligned_cols=150  Identities=15%  Similarity=0.115  Sum_probs=125.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      |+|+||||+|+||++++++|+++|+  +|++++|+...             ...+++++.+|++|.+++++++    +|+
T Consensus         6 ~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-------------~~~~~~~~~~D~~~~~~~~~~~----~d~   68 (215)
T 2a35_A            6 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------------EHPRLDNPVGPLAELLPQLDGS----IDT   68 (215)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------------CCTTEECCBSCHHHHGGGCCSC----CSE
T ss_pred             ceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-------------cCCCceEEeccccCHHHHHHhh----hcE
Confidence            7899999999999999999999998  99999975432             0236778889999888777665    899


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (267)
                      ||||||....  .....++.++.|..++.++++++.+.+.++||++||.++|+             .+.+.|+.+|.++|
T Consensus        69 vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~-------------~~~~~y~~sK~~~e  133 (215)
T 2a35_A           69 AFCCLGTTIK--EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA-------------KSSIFYNRVKGELE  133 (215)
T ss_dssp             EEECCCCCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT-------------TCSSHHHHHHHHHH
T ss_pred             EEECeeeccc--cCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCC-------------CCccHHHHHHHHHH
Confidence            9999997532  13466778899999999999999998889999999998884             23568999999999


Q ss_pred             HHHHHhhhcCCCc-EEEEeccccccccceeecCCCC
Q 024488          229 DIILDFSKNSDMA-VMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       229 ~l~~~~a~e~g~~-~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      .+++.    .+++ ++++||+       .+|||+..
T Consensus       134 ~~~~~----~~~~~~~~vrp~-------~v~g~~~~  158 (215)
T 2a35_A          134 QALQE----QGWPQLTIARPS-------LLFGPREE  158 (215)
T ss_dssp             HHHTT----SCCSEEEEEECC-------SEESTTSC
T ss_pred             HHHHH----cCCCeEEEEeCc-------eeeCCCCc
Confidence            99876    5899 9999999       77777643

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.91  E-value=9.8e-24  Score=186.09  Aligned_cols=176  Identities=12%  Similarity=-0.009  Sum_probs=125.9

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHh-CCCeEEEEecCCCCCcch--------hhhhh-hcCCCCCceEEEEccCCCHHHHH
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGA--------VKVLQ-ELFPEPGRLQFIYADLGDAKAVN  138 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~-~G~~V~~~~r~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~Dl~d~~~v~  138 (267)
                      ++|++|||||++|||+++++.|++ +|++|+++++.....+..        .+.+. .+...+..+..+.+|++|+++++
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~  125 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQ  125 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            459999999999999999999999 999999998754332211        01111 12223567889999999999999


Q ss_pred             HHhhc-----CCCCEEEEccccCC-------------cCCC---------------------ccChHHHHHHhHHH----
Q 024488          139 KFFSE-----NAFDAVMHFAAVAY-------------VGES---------------------TLDPLKYYHNITSN----  175 (267)
Q Consensus       139 ~~~~~-----~~~D~li~~Ag~~~-------------~~~~---------------------~~~~~~~~~~~~~~----  175 (267)
                      ++++.     +++|+||||||...             ..+.                     ++..++.|+..+..    
T Consensus       126 ~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~  205 (405)
T 3zu3_A          126 LTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGE  205 (405)
T ss_dssp             HHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred             HHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchh
Confidence            88876     78999999999741             1222                     33344445443332    


Q ss_pred             HH-HHHHHHHH----cCCCEEEEEeccccccCCCCCCCCCCCCCCCC--ChHHHHHHHHHHHHHHhhhc---C-CCcEEE
Q 024488          176 TL-VVLESMAR----HGVDTLIYSSTCATYGEPEKMPITEETPQAPI--NPYGKAKKMAEDIILDFSKN---S-DMAVMI  244 (267)
Q Consensus       176 ~~-~~l~~~~~----~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~--~~Y~~sK~a~e~l~~~~a~e---~-g~~~~~  244 (267)
                      .. ..+..+..    .+.++||++||.+..-           +.+..  ..|++||++++.++++++.|   . |+++++
T Consensus       206 ~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~-----------~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNa  274 (405)
T 3zu3_A          206 DWQMWIDALLDAGVLAEGAQTTAFTYLGEKI-----------THDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARV  274 (405)
T ss_dssp             HHHHHHHHHHHHTCEEEEEEEEEEECCCCGG-----------GTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEE
T ss_pred             HHHHHHHHHHHHhhhhCCcEEEEEeCchhhC-----------cCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEE
Confidence            22 23333322    2347999999976642           23334  89999999999999999998   6 999999


Q ss_pred             Eeccccccccc
Q 024488          245 LRLVVFFTLVA  255 (267)
Q Consensus       245 vrp~~v~~~~~  255 (267)
                      |.||.|.|...
T Consensus       275 VaPG~i~T~~s  285 (405)
T 3zu3_A          275 SVLKAVVSQAS  285 (405)
T ss_dssp             EECCCCCCHHH
T ss_pred             EEeCCCcCchh
Confidence            99999988543

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.91  E-value=1.1e-23  Score=192.89  Aligned_cols=168  Identities=20%  Similarity=0.182  Sum_probs=137.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~  145 (267)
                      +++|||||+||||++++++|+++|+ +|++++|+..+.+...+..+++...+.++.++.||++|.++++++++.    ++
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~  319 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDAP  319 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTSC
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            8999999999999999999999998 888888865555555555555544567899999999999999999876    57


Q ss_pred             CCEEEEccccC-CcCCCc----cChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChH
Q 024488          146 FDAVMHFAAVA-YVGEST----LDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (267)
Q Consensus       146 ~D~li~~Ag~~-~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (267)
                      +|+||||||+. ......    +..+..++.|+.++.++.+.+.+...++||++||.+.+.           +.+....|
T Consensus       320 ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~-----------g~~g~~~Y  388 (496)
T 3mje_A          320 LTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVW-----------GSGGQPGY  388 (496)
T ss_dssp             EEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHT-----------TCTTCHHH
T ss_pred             CeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcC-----------CCCCcHHH
Confidence            99999999986 433322    233456778899999999999988889999999977652           34557899


Q ss_pred             HHHHHHHHHHHHHhhhcCCCcEEEEecccc
Q 024488          221 GKAKKMAEDIILDFSKNSDMAVMILRLVVF  250 (267)
Q Consensus       221 ~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v  250 (267)
                      +++|++++.|++.++. .|+++++|.||.+
T Consensus       389 aAaKa~ldala~~~~~-~Gi~v~sV~pG~w  417 (496)
T 3mje_A          389 AAANAYLDALAEHRRS-LGLTASSVAWGTW  417 (496)
T ss_dssp             HHHHHHHHHHHHHHHH-TTCCCEEEEECEE
T ss_pred             HHHHHHHHHHHHHHHh-cCCeEEEEECCcc
Confidence            9999999999998765 6999999999944

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.91  E-value=7.3e-24  Score=198.76  Aligned_cols=168  Identities=13%  Similarity=0.089  Sum_probs=125.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccC-CCHHHH-HHHhhc-CCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL-GDAKAV-NKFFSE-NAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~v-~~~~~~-~~~  146 (267)
                      +|+++||||++|||+++|++|+++|++|++.++  +..++..+.+++   .+.++..+.+|+ .+.+.+ +++.+. +++
T Consensus       322 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~--~~~~~~~~~i~~---~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~i  396 (604)
T 2et6_A          322 DKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDF--KDATKTVDEIKA---AGGEAWPDQHDVAKDSEAIIKNVIDKYGTI  396 (604)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECS--SCCHHHHHHHHH---TTCEEEEECCCHHHHHHHHHHHHHHHHSCC
T ss_pred             CCeEEEECcchHHHHHHHHHHHHCCCEEEEEeC--ccHHHHHHHHHh---cCCeEEEEEcChHHHHHHHHHHHHHhcCCC
Confidence            499999999999999999999999999999885  223333333333   245677788888 554432 333333 789


Q ss_pred             CEEEEccccCCcCCCccChHH----HHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCC
Q 024488          147 DAVMHFAAVAYVGESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~----~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~  218 (267)
                      |+||||||+....+..+..++    .++.|+.+    ++.++|.|++++.++||++||.+.+-           +.+...
T Consensus       397 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~-----------~~~~~~  465 (604)
T 2et6_A          397 DILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIY-----------GNFGQA  465 (604)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS-----------CCTTBH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc-----------CCCCCh
Confidence            999999998755444333333    44556555    56688999888788999999977652           344567


Q ss_pred             hHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          219 PYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       219 ~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .|++||+++..|+++++.|   +|+++++|.||. .|.+
T Consensus       466 ~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m  503 (604)
T 2et6_A          466 NYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAM  503 (604)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC
T ss_pred             hHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcc
Confidence            9999999999999999998   689999999994 6543

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.90  E-value=6.3e-24  Score=199.78  Aligned_cols=168  Identities=15%  Similarity=0.063  Sum_probs=119.6

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC------CCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhh
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS------RGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS  142 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~  142 (267)
                      .+|++|||||++|||+++|++|+++|++|++++|..      ++.+.+.+..+++...+..+   .+|++|.++++++++
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~~d~~~~~~~~~   94 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADYNSVIDGAKVIE   94 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCE---EECCCCGGGHHHHHC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEeCCHHHHHHHHH
Confidence            349999999999999999999999999999998621      13333333334433223333   479999998888887


Q ss_pred             c-----CCCCEEEEccccCCcCCCcc----ChHHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCC
Q 024488          143 E-----NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPIT  209 (267)
Q Consensus       143 ~-----~~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~  209 (267)
                      .     +++|+||||||+.......+    ..+..++.|+.+    ++.++|.|++++.++||++||.+.+.        
T Consensus        95 ~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~--------  166 (613)
T 3oml_A           95 TAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIY--------  166 (613)
T ss_dssp             ----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHH--------
T ss_pred             HHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC--------
Confidence            5     68999999999876544333    333445566666    45577788888889999999977652        


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccc
Q 024488          210 EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVF  250 (267)
Q Consensus       210 e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v  250 (267)
                         +.+....|++||++++.+++.++.|   .|+++++|.||.+
T Consensus       167 ---~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~  207 (613)
T 3oml_A          167 ---GNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA  207 (613)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--
T ss_pred             ---CCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC
Confidence               3445789999999999999999988   5899999999964

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.90  E-value=1.9e-23  Score=195.94  Aligned_cols=168  Identities=15%  Similarity=0.108  Sum_probs=121.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC------CCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS------RGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~  143 (267)
                      +|+++||||++|||+++|++|+++|++|+++++..      ++.+.+.+..+++...+.++.   +|++|.++++++++.
T Consensus         8 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~---~d~~d~~~~~~~v~~   84 (604)
T 2et6_A            8 DKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAV---ADYNNVLDGDKIVET   84 (604)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEE---EECCCTTCHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEE---EEcCCHHHHHHHHHH
Confidence            49999999999999999999999999999998643      112333333344332233333   466665544444433


Q ss_pred             -----CCCCEEEEccccCCcCCCccChHH----HHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCC
Q 024488          144 -----NAFDAVMHFAAVAYVGESTLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       144 -----~~~D~li~~Ag~~~~~~~~~~~~~----~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                           +++|+||||||+....+..+.+++    .++.|+.+    ++.++|.|++++.++||++||.+.+-         
T Consensus        85 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~---------  155 (604)
T 2et6_A           85 AVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLY---------  155 (604)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH---------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC---------
Confidence                 789999999998655444443333    44556555    56689999888888999999976652         


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFT  252 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~  252 (267)
                        +.+....|++||++++.|+++++.|   +|+++++|.|+ +.|
T Consensus       156 --~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T  197 (604)
T 2et6_A          156 --GNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARS  197 (604)
T ss_dssp             --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCC
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcC
Confidence              3345679999999999999999998   68999999998 444

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.90  E-value=4e-23  Score=172.10  Aligned_cols=152  Identities=20%  Similarity=0.251  Sum_probs=107.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (267)
                      ..||+||||||+||||++++++|+++| ++|++++|+....+.       .  ....+.++.+|++|.++++++++  ++
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~-------~--~~~~~~~~~~Dl~d~~~~~~~~~--~~   89 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHK-------P--YPTNSQIIMGDVLNHAALKQAMQ--GQ   89 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS-------S--CCTTEEEEECCTTCHHHHHHHHT--TC
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc-------c--ccCCcEEEEecCCCHHHHHHHhc--CC
Confidence            346899999999999999999999999 899999975432211       1  12468899999999999999998  78


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCC--CCCCCCCCCCCChHHHHH
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKM--PITEETPQAPINPYGKAK  224 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~--~~~e~~~~~~~~~Y~~sK  224 (267)
                      |+||||||...              ....++++++.|++.+.++||++||.++|+.....  +..+..+..+...|..+|
T Consensus        90 D~vv~~a~~~~--------------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (236)
T 3qvo_A           90 DIVYANLTGED--------------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAA  155 (236)
T ss_dssp             SEEEEECCSTT--------------HHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHHH
T ss_pred             CEEEEcCCCCc--------------hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHHH
Confidence            99999998421              11346789999999999999999999998754322  222333333344455443


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEecccccc
Q 024488          225 KMAEDIILDFSKNSDMAVMILRLVVFFT  252 (267)
Q Consensus       225 ~a~e~l~~~~a~e~g~~~~~vrp~~v~~  252 (267)
                          ..+    ++.++++++||||+|++
T Consensus       156 ----~~l----~~~gi~~~~vrPg~i~~  175 (236)
T 3qvo_A          156 ----DAI----EASGLEYTILRPAWLTD  175 (236)
T ss_dssp             ----HHH----HTSCSEEEEEEECEEEC
T ss_pred             ----HHH----HHCCCCEEEEeCCcccC
Confidence                333    24799999999995554

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.90  E-value=4.6e-24  Score=186.54  Aligned_cols=173  Identities=10%  Similarity=-0.006  Sum_probs=123.2

Q ss_pred             CcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEEecCC---------CCCcchhhhhhhcCCCCCceEEEEccCCCH--H-
Q 024488           70 VTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLS---------RGNIGAVKVLQELFPEPGRLQFIYADLGDA--K-  135 (267)
Q Consensus        70 ~k~vlVTGasg--gIG~~la~~L~~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~-  135 (267)
                      .|++|||||++  |||+++|++|+++|++|+++++..         ...+...+...........+.++.+|+++.  + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            38999999985  999999999999999999777532         111111111111111123478889999887  7 


Q ss_pred             -----------------HHHHHhhc-----CCCCEEEEccccCC--cCCCcc----ChHHHHHHhHHHHHHHHHH----H
Q 024488          136 -----------------AVNKFFSE-----NAFDAVMHFAAVAY--VGESTL----DPLKYYHNITSNTLVVLES----M  183 (267)
Q Consensus       136 -----------------~v~~~~~~-----~~~D~li~~Ag~~~--~~~~~~----~~~~~~~~~~~~~~~~l~~----~  183 (267)
                                       +++++++.     +++|+||||||+..  ..+..+    ..+..++.|+.++..+...    |
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m  161 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                             77777765     78999999999742  223222    3344566777775554444    4


Q ss_pred             HHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHhhhc----CCCcEEEEeccccccccc
Q 024488          184 ARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN-PYGKAKKMAEDIILDFSKN----SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       184 ~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~-~Y~~sK~a~e~l~~~~a~e----~g~~~~~vrp~~v~~~~~  255 (267)
                      .+.  ++||++||.+.+.           +.+... .|++||++++.|++.++.|    .|+++++|.||+|.|.+.
T Consensus       162 ~~~--g~Iv~isS~~~~~-----------~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~  225 (329)
T 3lt0_A          162 KPQ--SSIISLTYHASQK-----------VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAA  225 (329)
T ss_dssp             EEE--EEEEEEECGGGTS-----------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHH
T ss_pred             hhC--CeEEEEeCccccC-----------CCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhH
Confidence            433  7999999987763           444554 8999999999999999987    389999999999998553

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.90  E-value=1.2e-23  Score=187.15  Aligned_cols=175  Identities=12%  Similarity=-0.030  Sum_probs=124.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHh-CCCeEEEEecCCCCCcch--------hhhh-hhcCCCCCceEEEEccCCCHHHHHH
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGA--------VKVL-QELFPEPGRLQFIYADLGDAKAVNK  139 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~-~G~~V~~~~r~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~Dl~d~~~v~~  139 (267)
                      +|++||||||+|||+++|+.|++ +|++|++++|.....++.        .+.+ +++...+..+..+.+|++|.+++++
T Consensus        61 gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~  140 (422)
T 3s8m_A           61 PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQ  140 (422)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred             CCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Confidence            59999999999999999999999 999999999765433321        0011 2222235678899999999999988


Q ss_pred             Hhhc------CCCCEEEEccccC-------------CcCCC---------------------ccChHHHHHHhHHH----
Q 024488          140 FFSE------NAFDAVMHFAAVA-------------YVGES---------------------TLDPLKYYHNITSN----  175 (267)
Q Consensus       140 ~~~~------~~~D~li~~Ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~----  175 (267)
                      +++.      +++|+||||||..             ...+.                     ++..++.|+..+..    
T Consensus       141 ~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~  220 (422)
T 3s8m_A          141 VIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQ  220 (422)
T ss_dssp             HHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred             HHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhchh
Confidence            8764      5899999999872             11121                     12334444443322    


Q ss_pred             HH-HHHHHHHHc----CCCEEEEEeccccccCCCCCCCCCCCCCCCC--ChHHHHHHHHHHHHHHhhhc---CCCcEEEE
Q 024488          176 TL-VVLESMARH----GVDTLIYSSTCATYGEPEKMPITEETPQAPI--NPYGKAKKMAEDIILDFSKN---SDMAVMIL  245 (267)
Q Consensus       176 ~~-~~l~~~~~~----~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~--~~Y~~sK~a~e~l~~~~a~e---~g~~~~~v  245 (267)
                      .. .++..+...    +.++||++||.+..-           +.+..  ..|++||++++.++++++.|   .|+++++|
T Consensus       221 ~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~-----------~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaV  289 (422)
T 3s8m_A          221 DWELWIDALEGAGVLADGARSVAFSYIGTEI-----------TWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVA  289 (422)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEEEEEEECCCGG-----------GHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred             HHHHHHHHHHHHHHhhCCCEEEEEeCchhhc-----------cCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEE
Confidence            21 334443322    347999999976641           22223  78999999999999999998   68999999


Q ss_pred             eccccccccc
Q 024488          246 RLVVFFTLVA  255 (267)
Q Consensus       246 rp~~v~~~~~  255 (267)
                      .||.|.|...
T Consensus       290 aPG~i~T~~~  299 (422)
T 3s8m_A          290 VLKSVVTQAS  299 (422)
T ss_dssp             EECCCCCTTG
T ss_pred             EcCCCcChhh
Confidence            9999988654

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.90  E-value=6.8e-23  Score=188.61  Aligned_cols=170  Identities=17%  Similarity=0.169  Sum_probs=134.9

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      .++++|||||+||||++++++|+++|+ +|++++|+........+..+++...+.++.++.||++|.++++++++.+++|
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld  337 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN  337 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence            348999999999999999999999999 6899998654333444444555444668999999999999999999877799


Q ss_pred             EEEEccccCCcCCCc----cChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHH
Q 024488          148 AVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGK  222 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~-~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~  222 (267)
                      +||||||+.......    +..+..++.|+.++.++.+.+... +.++||++||.+.+.           +.+....|++
T Consensus       338 ~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~-----------g~~g~~~Yaa  406 (511)
T 2z5l_A          338 AVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTW-----------GNAGQGAYAA  406 (511)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTT-----------CCTTBHHHHH
T ss_pred             EEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcC-----------CCCCCHHHHH
Confidence            999999987554322    233445677888888888887665 678999999976541           2344679999


Q ss_pred             HHHHHHHHHHHhhhcCCCcEEEEecccc
Q 024488          223 AKKMAEDIILDFSKNSDMAVMILRLVVF  250 (267)
Q Consensus       223 sK~a~e~l~~~~a~e~g~~~~~vrp~~v  250 (267)
                      +|++++.+++.++. .|+++++|+||.+
T Consensus       407 aKa~ld~la~~~~~-~gi~v~sv~pG~~  433 (511)
T 2z5l_A          407 ANAALDALAERRRA-AGLPATSVAWGLW  433 (511)
T ss_dssp             HHHHHHHHHHHHHT-TTCCCEEEEECCB
T ss_pred             HHHHHHHHHHHHHH-cCCcEEEEECCcc
Confidence            99999999998754 6999999999955

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.90  E-value=4.5e-23  Score=188.91  Aligned_cols=172  Identities=17%  Similarity=0.151  Sum_probs=135.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      .++++|||||+||||++++++|+++|++ |++++|+....+...+..+++...+.++.++.+|++|.++++++++.    
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~  304 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD  304 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence            3489999999999999999999999995 99999865433333343344433456889999999999999999875    


Q ss_pred             CCCCEEEEccccCCcCCC----ccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCCh
Q 024488          144 NAFDAVMHFAAVAYVGES----TLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~  219 (267)
                      +++|+||||||+......    .+..+..++.|+.++.++.+.+.+.+.++||++||.+.+.           +.+....
T Consensus       305 g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~-----------g~~g~~~  373 (486)
T 2fr1_A          305 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAF-----------GAPGLGG  373 (486)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHT-----------CCTTCTT
T ss_pred             CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcC-----------CCCCCHH
Confidence            468999999998654432    2233445667899999999999888889999999976642           2345789


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCcEEEEecccccc
Q 024488          220 YGKAKKMAEDIILDFSKNSDMAVMILRLVVFFT  252 (267)
Q Consensus       220 Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~  252 (267)
                      |+++|++.+.+++.++. .|+++++|+||.+.+
T Consensus       374 Yaaaka~l~~la~~~~~-~gi~v~~i~pG~~~~  405 (486)
T 2fr1_A          374 YAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAG  405 (486)
T ss_dssp             THHHHHHHHHHHHHHHH-TTCCCEEEEECCBC-
T ss_pred             HHHHHHHHHHHHHHHHh-cCCeEEEEECCeeCC
Confidence            99999999999988765 699999999995543

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.89  E-value=4.9e-23  Score=177.34  Aligned_cols=173  Identities=12%  Similarity=-0.060  Sum_probs=117.7

Q ss_pred             CcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCC--------CCCcchhhhhhhcCCCC--CceEEEEcc-------
Q 024488           70 VTHVLVTGGA--GYIGSHAALRLLKDSYRVTIVDNLS--------RGNIGAVKVLQELFPEP--GRLQFIYAD-------  130 (267)
Q Consensus        70 ~k~vlVTGas--ggIG~~la~~L~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~--~~~~~~~~D-------  130 (267)
                      +|++|||||+  +|||+++|++|+++|++|++++|+.        ++.+.+.+ ++++....  .....+.+|       
T Consensus         8 ~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (297)
T 1d7o_A            8 GKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQ-SRVLPDGSLMEIKKVYPLDAVFDNPE   86 (297)
T ss_dssp             TCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTG-GGBCTTSSBCCEEEEEEECTTCCSGG
T ss_pred             CCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhh-hhhhccccccccccccccceeccchh
Confidence            3899999999  9999999999999999999998531        01111111 12221100  012334443       


Q ss_pred             -CC----C--------HHHHHHHhhc-----CCCCEEEEccccCC--cCC----CccChHHHHHHhHHHHHHHHHHHHHc
Q 024488          131 -LG----D--------AKAVNKFFSE-----NAFDAVMHFAAVAY--VGE----STLDPLKYYHNITSNTLVVLESMARH  186 (267)
Q Consensus       131 -l~----d--------~~~v~~~~~~-----~~~D~li~~Ag~~~--~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~  186 (267)
                       ++    |        ++++++++++     +++|+||||||+..  ..+    ..+..+..++.|+.++..++..+.+.
T Consensus        87 dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  166 (297)
T 1d7o_A           87 DVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPI  166 (297)
T ss_dssp             GSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence             32    2        3455555543     68999999999643  222    22334456677888877777766543


Q ss_pred             --CCCEEEEEeccccccCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHhhhc----CCCcEEEEecccccccc
Q 024488          187 --GVDTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSKN----SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       187 --~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~-~~Y~~sK~a~e~l~~~~a~e----~g~~~~~vrp~~v~~~~  254 (267)
                        ..++||++||.+.+.           +.+.. ..|++||++++.+++.++.|    +|+++++|+||+|.|..
T Consensus       167 m~~~g~iv~isS~~~~~-----------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~  230 (297)
T 1d7o_A          167 MNPGGASISLTYIASER-----------IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRA  230 (297)
T ss_dssp             EEEEEEEEEEECGGGTS-----------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCC
T ss_pred             hccCceEEEEecccccc-----------CCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccch
Confidence              237999999987763           33344 58999999999999999987    48999999999777754

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.89  E-value=1e-22  Score=188.08  Aligned_cols=172  Identities=16%  Similarity=0.150  Sum_probs=132.2

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCe-EEEE-ecCCCC----------CcchhhhhhhcCCCCCceEEEEccCCCHHH
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYR-VTIV-DNLSRG----------NIGAVKVLQELFPEPGRLQFIYADLGDAKA  136 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~-V~~~-~r~~~~----------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~  136 (267)
                      .++++|||||+||||.+++++|+++|++ |+++ +|+...          .+.+.+..+++...+.++.++.+|++|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            3489999999999999999999999997 6666 776432          233344444443346689999999999999


Q ss_pred             HHHHhhc----CCCCEEEEccccCCcCCCcc----ChHHHHHHhHHHHHHHHHHHHHcC-----CCEEEEEeccccccCC
Q 024488          137 VNKFFSE----NAFDAVMHFAAVAYVGESTL----DPLKYYHNITSNTLVVLESMARHG-----VDTLIYSSTCATYGEP  203 (267)
Q Consensus       137 v~~~~~~----~~~D~li~~Ag~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~-----~~~iV~vSS~~~~g~~  203 (267)
                      ++++++.    +++|+||||||+.......+    ..+..++.|+.++.++...+....     .++||++||.+.+.  
T Consensus       330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~--  407 (525)
T 3qp9_A          330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW--  407 (525)
T ss_dssp             HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT--
T ss_pred             HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC--
Confidence            9999986    57999999999876544333    334556778888888777776654     78999999977762  


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEecccccc
Q 024488          204 EKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFT  252 (267)
Q Consensus       204 ~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~  252 (267)
                               +.+....|+++|++++.|++.++. .|+++++|+||.+.+
T Consensus       408 ---------g~~g~~~YaaaKa~l~~lA~~~~~-~gi~v~sI~pG~~~t  446 (525)
T 3qp9_A          408 ---------GGAGQGAYAAGTAFLDALAGQHRA-DGPTVTSVAWSPWEG  446 (525)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHTSCCS-SCCEEEEEEECCBTT
T ss_pred             ---------CCCCCHHHHHHHHHHHHHHHHHHh-CCCCEEEEECCcccc
Confidence                     345578999999999999877654 699999999997754

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.89  E-value=1.1e-22  Score=187.97  Aligned_cols=162  Identities=15%  Similarity=0.132  Sum_probs=127.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|+||||||||+||++++++|+++|++|++++|+....                 ..+.+|+.+.  +.++++  ++|+|
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~-----------------~~v~~d~~~~--~~~~l~--~~D~V  205 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP-----------------GKRFWDPLNP--ASDLLD--GADVL  205 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT-----------------TCEECCTTSC--CTTTTT--TCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc-----------------cceeecccch--hHHhcC--CCCEE
Confidence            48999999999999999999999999999999854321                 1156777643  334444  89999


Q ss_pred             EEccccCCcCC-CccChHHHHHHhHHHHHHHHHH-HHHcCCCEEEEEecccccc-CCCCCCCCCCCCCCCCChHHHHHHH
Q 024488          150 MHFAAVAYVGE-STLDPLKYYHNITSNTLVVLES-MARHGVDTLIYSSTCATYG-EPEKMPITEETPQAPINPYGKAKKM  226 (267)
Q Consensus       150 i~~Ag~~~~~~-~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~iV~vSS~~~~g-~~~~~~~~e~~~~~~~~~Y~~sK~a  226 (267)
                      ||+||...... .....+..++.|+.++.+++++ +.+.+.++||++||.++|| .....+++|+.+. +.+.|+.+|..
T Consensus       206 ih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~~~y~~~~~~  284 (516)
T 3oh8_A          206 VHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES-GDDFLAEVCRD  284 (516)
T ss_dssp             EECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-CSSHHHHHHHH
T ss_pred             EECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC-CcChHHHHHHH
Confidence            99999754322 3445677889999999999998 4555678999999999998 4555677888776 78899999999


Q ss_pred             HHHHHHHhhhcCCCcEEEEeccccccccceeecCC
Q 024488          227 AEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKIN  261 (267)
Q Consensus       227 ~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~  261 (267)
                      .|.+...+ .+.|++++++||+       ++|||+
T Consensus       285 ~E~~~~~~-~~~gi~~~ilRp~-------~v~Gp~  311 (516)
T 3oh8_A          285 WEHATAPA-SDAGKRVAFIRTG-------VALSGR  311 (516)
T ss_dssp             HHHTTHHH-HHTTCEEEEEEEC-------EEEBTT
T ss_pred             HHHHHHHH-HhCCCCEEEEEee-------EEECCC
Confidence            99886654 4479999999999       888886

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.88  E-value=9.9e-23  Score=180.43  Aligned_cols=138  Identities=18%  Similarity=0.261  Sum_probs=120.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      |+||||||+|+||++++++|+++|+ +|+.++|.                            .|.++++++++  ++|+|
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~----------------------------~d~~~l~~~~~--~~d~V   50 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ----------------------------TKEEELESALL--KADFI   50 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT----------------------------CCHHHHHHHHH--HCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC----------------------------CCHHHHHHHhc--cCCEE
Confidence            4799999999999999999999998 88776531                            68899999998  79999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (267)
                      ||+||....    .++.+.++.|+.++.++++++.+.+.+ +||++||.++|+               .+.|+.+|.++|
T Consensus        51 ih~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~---------------~~~Y~~sK~~~E  111 (369)
T 3st7_A           51 VHLAGVNRP----EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ---------------DNPYGESKLQGE  111 (369)
T ss_dssp             EECCCSBCT----TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS---------------CSHHHHHHHHHH
T ss_pred             EECCcCCCC----CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC---------------CCCchHHHHHHH
Confidence            999997643    244556778899999999999988876 999999999984               678999999999


Q ss_pred             HHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          229 DIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       229 ~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      .+++.++++.+++++++||+       ++|||+..+
T Consensus       112 ~~~~~~~~~~g~~~~i~R~~-------~v~G~~~~~  140 (369)
T 3st7_A          112 QLLREYAEEYGNTVYIYRWP-------NLFGKWCKP  140 (369)
T ss_dssp             HHHHHHHHHHCCCEEEEEEC-------EEECTTCCT
T ss_pred             HHHHHHHHHhCCCEEEEECC-------ceeCCCCCC
Confidence            99999999999999999999       999997654

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.88  E-value=4.7e-22  Score=169.77  Aligned_cols=143  Identities=17%  Similarity=0.273  Sum_probs=118.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      |+|+||||||+||++++++|+++  |++|++++|+....+    .+..     .+++++.+|++|.+++.++++  ++|+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----~l~~-----~~~~~~~~D~~d~~~l~~~~~--~~d~   69 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS----TLAD-----QGVEVRHGDYNQPESLQKAFA--GVSK   69 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH----HHHH-----TTCEEEECCTTCHHHHHHHTT--TCSE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh----HHhh-----cCCeEEEeccCCHHHHHHHHh--cCCE
Confidence            57999999999999999999999  999999997543221    1111     257889999999999999998  7999


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (267)
                      |||+|+...      .  .  +.|+.++.++++++.+.+.++||++||.+++..              ...|+.+|.++|
T Consensus        70 vi~~a~~~~------~--~--~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~--------------~~~y~~~K~~~E  125 (287)
T 2jl1_A           70 LLFISGPHY------D--N--TLLIVQHANVVKAARDAGVKHIAYTGYAFAEES--------------IIPLAHVHLATE  125 (287)
T ss_dssp             EEECCCCCS------C--H--HHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC--------------CSTHHHHHHHHH
T ss_pred             EEEcCCCCc------C--c--hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC--------------CCchHHHHHHHH
Confidence            999998521      1  1  457889999999999988899999999888631              137999999999


Q ss_pred             HHHHHhhhcCCCcEEEEecccccc
Q 024488          229 DIILDFSKNSDMAVMILRLVVFFT  252 (267)
Q Consensus       229 ~l~~~~a~e~g~~~~~vrp~~v~~  252 (267)
                      .+++.    .+++++++||+++++
T Consensus       126 ~~~~~----~~~~~~ilrp~~~~~  145 (287)
T 2jl1_A          126 YAIRT----TNIPYTFLRNALYTD  145 (287)
T ss_dssp             HHHHH----TTCCEEEEEECCBHH
T ss_pred             HHHHH----cCCCeEEEECCEecc
Confidence            99875    799999999996665

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.88  E-value=1.4e-22  Score=175.96  Aligned_cols=172  Identities=13%  Similarity=-0.039  Sum_probs=117.9

Q ss_pred             CcEEEEEcC--CChhHHHHHHHHHhCCCeEEEEecCC--------CCCcchhhhhhhcCCCCC---ceEEEEccC-----
Q 024488           70 VTHVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLS--------RGNIGAVKVLQELFPEPG---RLQFIYADL-----  131 (267)
Q Consensus        70 ~k~vlVTGa--sggIG~~la~~L~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~---~~~~~~~Dl-----  131 (267)
                      +|++|||||  ++|||++++++|+++|++|++++|+.        +..+.+ +.++++.. +.   .+.++.+|+     
T Consensus         9 gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~d~~~~~~   86 (315)
T 2o2s_A            9 GQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRL-DEDRKLPD-GSLIEFAGVYPLDAAFDKP   86 (315)
T ss_dssp             TCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTT-HHHHBCTT-SCBCCCSCEEECCTTCSST
T ss_pred             CCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhh-hhhhhhhc-ccccccccccccccccccc
Confidence            399999999  89999999999999999999998642        001111 11122211 11   124444443     


Q ss_pred             -------CC--------HHHHHHHhhc-----CCCCEEEEccccCC--cCCCc----cChHHHHHHhHHHHHHHHHHHHH
Q 024488          132 -------GD--------AKAVNKFFSE-----NAFDAVMHFAAVAY--VGEST----LDPLKYYHNITSNTLVVLESMAR  185 (267)
Q Consensus       132 -------~d--------~~~v~~~~~~-----~~~D~li~~Ag~~~--~~~~~----~~~~~~~~~~~~~~~~~l~~~~~  185 (267)
                             +|        .++++++++.     +++|+||||||+..  ..+..    +..+..++.|+.++..++..+..
T Consensus        87 ~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  166 (315)
T 2o2s_A           87 EDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGP  166 (315)
T ss_dssp             TSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHST
T ss_pred             chhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence                   22        4456665554     68999999999753  22222    23344566777777776666543


Q ss_pred             c--CCCEEEEEeccccccCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHhhhc----CCCcEEEEecccccccc
Q 024488          186 H--GVDTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSKN----SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       186 ~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~-~~Y~~sK~a~e~l~~~~a~e----~g~~~~~vrp~~v~~~~  254 (267)
                      .  ..++||++||.+.+.           +.+.. ..|++||++++.+++.++.|    +|+++++|+||+|.|..
T Consensus       167 ~m~~~g~Iv~isS~~~~~-----------~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~  231 (315)
T 2o2s_A          167 IMNEGGSAVTLSYLAAER-----------VVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRA  231 (315)
T ss_dssp             TEEEEEEEEEEEEGGGTS-----------CCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHH
T ss_pred             HHhcCCEEEEEecccccc-----------cCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchh
Confidence            2  137999999987763           33334 58999999999999999887    58999999999998854

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.88  E-value=5.4e-22  Score=177.49  Aligned_cols=175  Identities=11%  Similarity=-0.031  Sum_probs=123.8

Q ss_pred             CcEEEEEcCCChhHHH--HHHHHHhCCCeEEEEecCCCCCcch--------hhhhh-hcCCCCCceEEEEccCCCHHHHH
Q 024488           70 VTHVLVTGGAGYIGSH--AALRLLKDSYRVTIVDNLSRGNIGA--------VKVLQ-ELFPEPGRLQFIYADLGDAKAVN  138 (267)
Q Consensus        70 ~k~vlVTGasggIG~~--la~~L~~~G~~V~~~~r~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~Dl~d~~~v~  138 (267)
                      +|++|||||++|||++  ++++|+++|++|++++|.....+..        .+.++ .....+..+.++.+|++|.++++
T Consensus        60 gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~  139 (418)
T 4eue_A           60 PKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKD  139 (418)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHH
Confidence            4999999999999999  9999999999999999765432211        11222 11223557889999999999999


Q ss_pred             HHhhc-----CCCCEEEEccccC-------------CcCCC---------------------ccChHHHHHHhHHH----
Q 024488          139 KFFSE-----NAFDAVMHFAAVA-------------YVGES---------------------TLDPLKYYHNITSN----  175 (267)
Q Consensus       139 ~~~~~-----~~~D~li~~Ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~----  175 (267)
                      ++++.     +++|+||||||..             ...+.                     ++..++.|+..+..    
T Consensus       140 ~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~  219 (418)
T 4eue_A          140 KVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGGE  219 (418)
T ss_dssp             HHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSSH
T ss_pred             HHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhHH
Confidence            88876     7899999999974             11111                     11233444333322    


Q ss_pred             HH-HHHHHHHH----cCCCEEEEEeccccccCCCCCCCCCCCCCCCC--ChHHHHHHHHHHHHHHhhhc----CCCcEEE
Q 024488          176 TL-VVLESMAR----HGVDTLIYSSTCATYGEPEKMPITEETPQAPI--NPYGKAKKMAEDIILDFSKN----SDMAVMI  244 (267)
Q Consensus       176 ~~-~~l~~~~~----~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~--~~Y~~sK~a~e~l~~~~a~e----~g~~~~~  244 (267)
                      .. .++..+..    .+.++||++||.+..-           +.+.+  ..|++||++++.++++++.|    .|+++++
T Consensus       220 ~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~-----------~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~  288 (418)
T 4eue_A          220 DWQEWCEELLYEDCFSDKATTIAYSYIGSPR-----------TYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFV  288 (418)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEEEEEECCCCGG-----------GTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEE
T ss_pred             HHHHHHHHHHHHhhhcCCcEEEEEeCchhcC-----------CCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEE
Confidence            11 23333332    2347999999976542           33445  89999999999999999988    4799999


Q ss_pred             Eeccccccccc
Q 024488          245 LRLVVFFTLVA  255 (267)
Q Consensus       245 vrp~~v~~~~~  255 (267)
                      |.||.|.|...
T Consensus       289 V~PG~v~T~~s  299 (418)
T 4eue_A          289 SVNKALVTKAS  299 (418)
T ss_dssp             EECCCCCCHHH
T ss_pred             EECCcCcChhh
Confidence            99999988543

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.88  E-value=1.6e-22  Score=175.95  Aligned_cols=175  Identities=13%  Similarity=-0.026  Sum_probs=101.1

Q ss_pred             CcEEEEEcC--CChhHHHHHHHHHhCCCeEEEEecCC--------CCCcchh-----------hhhhhcCCCCC---ceE
Q 024488           70 VTHVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLS--------RGNIGAV-----------KVLQELFPEPG---RLQ  125 (267)
Q Consensus        70 ~k~vlVTGa--sggIG~~la~~L~~~G~~V~~~~r~~--------~~~~~~~-----------~~~~~~~~~~~---~~~  125 (267)
                      +|++|||||  ++|||+++|++|+++|++|++++|+.        ++.+.+.           +..+++...+.   ...
T Consensus         9 ~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (319)
T 2ptg_A            9 GKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDK   88 (319)
T ss_dssp             TCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSE
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccccc
Confidence            389999999  89999999999999999999998642        1111111           11111111111   134


Q ss_pred             EEEccC------------CC--------HHHHHHHhhc-----CCCCEEEEccccCC--cCCCc----cChHHHHHHhHH
Q 024488          126 FIYADL------------GD--------AKAVNKFFSE-----NAFDAVMHFAAVAY--VGEST----LDPLKYYHNITS  174 (267)
Q Consensus       126 ~~~~Dl------------~d--------~~~v~~~~~~-----~~~D~li~~Ag~~~--~~~~~----~~~~~~~~~~~~  174 (267)
                      ++.+|+            +|        .+++++++++     +++|+||||||+..  ..+..    +..+..++.|+.
T Consensus        89 ~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~  168 (319)
T 2ptg_A           89 IYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSY  168 (319)
T ss_dssp             EEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTH
T ss_pred             cccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhH
Confidence            444442            22        2355555554     68999999999752  22222    223445667777


Q ss_pred             HHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHhhhc----CCCcEEEEec
Q 024488          175 NTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPI-NPYGKAKKMAEDIILDFSKN----SDMAVMILRL  247 (267)
Q Consensus       175 ~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~-~~Y~~sK~a~e~l~~~~a~e----~g~~~~~vrp  247 (267)
                      ++..++..+...  ..++||++||.+.+.           +.+.. ..|++||++++.+++.++.|    +|+++++|+|
T Consensus       169 g~~~l~~~~~~~m~~~g~Iv~isS~~~~~-----------~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~P  237 (319)
T 2ptg_A          169 SFVSLLQHFLPLMKEGGSALALSYIASEK-----------VIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISA  237 (319)
T ss_dssp             HHHHHHHHHGGGEEEEEEEEEEEECC-----------------------------THHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             HHHHHHHHHHHHHhcCceEEEEecccccc-----------ccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEee
Confidence            776666665543  137999999987652           33344 58999999999999999987    4899999999


Q ss_pred             cccccccc
Q 024488          248 VVFFTLVA  255 (267)
Q Consensus       248 ~~v~~~~~  255 (267)
                      |+|.|.+.
T Consensus       238 G~v~T~~~  245 (319)
T 2ptg_A          238 GPLKSRAA  245 (319)
T ss_dssp             CCCC----
T ss_pred             CCccChhh
Confidence            99988653

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.88  E-value=1.3e-21  Score=168.33  Aligned_cols=154  Identities=18%  Similarity=0.176  Sum_probs=121.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +|+|+||||||+||++++++|+++| ++|++++|+.....  .+.+..     .+++++.+|++|++++.++++  ++|+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~--~~~l~~-----~~~~~~~~D~~d~~~l~~~~~--~~d~   75 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKA--AKELRL-----QGAEVVQGDQDDQVIMELALN--GAYA   75 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHH--HHHHHH-----TTCEEEECCTTCHHHHHHHHT--TCSE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHH--HHHHHH-----CCCEEEEecCCCHHHHHHHHh--cCCE
Confidence            3799999999999999999999999 99999998543211  111111     257889999999999999998  7999


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (267)
                      |||+|+.....        ..+.++..++++++++.+.+.++||++||.++++...         ..+...|+.+|.++|
T Consensus        76 vi~~a~~~~~~--------~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~---------~~~~~~y~~sK~~~e  138 (299)
T 2wm3_A           76 TFIVTNYWESC--------SQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTA---------GRLAAAHFDGKGEVE  138 (299)
T ss_dssp             EEECCCHHHHT--------CHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTT---------TSCCCHHHHHHHHHH
T ss_pred             EEEeCCCCccc--------cchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCC---------CcccCchhhHHHHHH
Confidence            99999853110        1345677899999999999999999988877775211         123578999999999


Q ss_pred             HHHHHhhhcCCCcEEEEeccccccc
Q 024488          229 DIILDFSKNSDMAVMILRLVVFFTL  253 (267)
Q Consensus       229 ~l~~~~a~e~g~~~~~vrp~~v~~~  253 (267)
                      .+++.    .|++++++||+++++.
T Consensus       139 ~~~~~----~gi~~~ilrp~~~~~~  159 (299)
T 2wm3_A          139 EYFRD----IGVPMTSVRLPCYFEN  159 (299)
T ss_dssp             HHHHH----HTCCEEEEECCEEGGG
T ss_pred             HHHHH----CCCCEEEEeecHHhhh
Confidence            99876    5899999999977764

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.87  E-value=1.3e-21  Score=171.88  Aligned_cols=156  Identities=16%  Similarity=0.273  Sum_probs=124.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +++|+||||||+||++++++|++.|++|++++|+........+.++++.  ..+++++.+|++|.+++.+++++.++|+|
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V   87 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE--DKGAIIVYGLINEQEAMEKILKEHEIDIV   87 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH--hCCcEEEEeecCCHHHHHHHHhhCCCCEE
Confidence            3789999999999999999999999999999986533222222222221  24688999999999999999987789999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (267)
                      ||+|+..               |+.++.++++++.+.+ .++||+ |   .||.    +.+|..+..+...|+.+|.++|
T Consensus        88 i~~a~~~---------------n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~----~~~e~~~~~p~~~y~~sK~~~e  144 (346)
T 3i6i_A           88 VSTVGGE---------------SILDQIALVKAMKAVGTIKRFLP-S---EFGH----DVNRADPVEPGLNMYREKRRVR  144 (346)
T ss_dssp             EECCCGG---------------GGGGHHHHHHHHHHHCCCSEEEC-S---CCSS----CTTTCCCCTTHHHHHHHHHHHH
T ss_pred             EECCchh---------------hHHHHHHHHHHHHHcCCceEEee-c---ccCC----CCCccCcCCCcchHHHHHHHHH
Confidence            9999862               5667889999999998 889886 4   3432    2455666777889999999999


Q ss_pred             HHHHHhhhcCCCcEEEEecccccccc
Q 024488          229 DIILDFSKNSDMAVMILRLVVFFTLV  254 (267)
Q Consensus       229 ~l~~~~a~e~g~~~~~vrp~~v~~~~  254 (267)
                      .+++.    .|++++++|||+++++.
T Consensus       145 ~~l~~----~g~~~tivrpg~~~g~~  166 (346)
T 3i6i_A          145 QLVEE----SGIPFTYICCNSIASWP  166 (346)
T ss_dssp             HHHHH----TTCCBEEEECCEESSCC
T ss_pred             HHHHH----cCCCEEEEEeccccccc
Confidence            98887    78999999999776643

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.87  E-value=3e-21  Score=165.94  Aligned_cols=159  Identities=17%  Similarity=0.194  Sum_probs=122.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||||+||++++++|+++||+|+++.|++..               ..   +..|    +...+.++  ++|.||
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~---------------~~---~~~~----~~~~~~l~--~~d~vi   56 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP---------------GR---ITWD----ELAASGLP--SCDAAV   56 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT---------------TE---EEHH----HHHHHCCC--SCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc---------------Ce---eecc----hhhHhhcc--CCCEEE
Confidence            469999999999999999999999999999975321               11   1222    11123333  799999


Q ss_pred             EccccCCcCC----CccChHHHHHHhHHHHHHHHHHHHHcCC--CEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHH
Q 024488          151 HFAAVAYVGE----STLDPLKYYHNITSNTLVVLESMARHGV--DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAK  224 (267)
Q Consensus       151 ~~Ag~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK  224 (267)
                      |+|+......    ......+.++.|+.+|.+++..+.+.+.  .++|++||.++||.....+.+|++|..+...|+.+|
T Consensus        57 hla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~  136 (298)
T 4b4o_A           57 NLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLV  136 (298)
T ss_dssp             ECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHH
T ss_pred             EeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHH
Confidence            9998542221    2233345677889999999999987764  458899999999998888999999999999999988


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCC
Q 024488          225 KMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       225 ~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      ...|...  +..+.+++++++||+       ++|||+.
T Consensus       137 ~~~e~~~--~~~~~~~~~~~~r~~-------~v~g~~~  165 (298)
T 4b4o_A          137 TKWEAAA--RLPGDSTRQVVVRSG-------VVLGRGG  165 (298)
T ss_dssp             HHHHHHH--CCSSSSSEEEEEEEC-------EEECTTS
T ss_pred             HHHHHHH--HhhccCCceeeeeee-------eEEcCCC
Confidence            8887643  344578999999999       8898863

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.86  E-value=3.9e-21  Score=163.88  Aligned_cols=140  Identities=16%  Similarity=0.207  Sum_probs=111.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           72 HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|+||||+|+||++++++|+++  |++|++++|+....+.    +..     .+++++.+|++|.+++.++++  ++|+|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~----~~~-----~~~~~~~~D~~d~~~~~~~~~--~~d~v   69 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA----LAA-----QGITVRQADYGDEAALTSALQ--GVEKL   69 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH----HHH-----TTCEEEECCTTCHHHHHHHTT--TCSEE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh----hhc-----CCCeEEEcCCCCHHHHHHHHh--CCCEE
Confidence            4899999999999999999999  9999999975433211    111     257889999999999999998  78999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (267)
                      ||+|+...            ..++.+++++++++.+.+.++||++||.++|.              ....|+.+|.++|.
T Consensus        70 i~~a~~~~------------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~--------------~~~~y~~sK~~~e~  123 (286)
T 2zcu_A           70 LLISSSEV------------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT--------------SPLGLADEHIETEK  123 (286)
T ss_dssp             EECC--------------------CHHHHHHHHHHHHTCCEEEEEEETTTTT--------------CCSTTHHHHHHHHH
T ss_pred             EEeCCCCc------------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC--------------CcchhHHHHHHHHH
Confidence            99998521            13567899999999998889999999988862              12479999999999


Q ss_pred             HHHHhhhcCCCcEEEEecccccc
Q 024488          230 IILDFSKNSDMAVMILRLVVFFT  252 (267)
Q Consensus       230 l~~~~a~e~g~~~~~vrp~~v~~  252 (267)
                      +++.    .+++++++||+++++
T Consensus       124 ~~~~----~~~~~~ilrp~~~~~  142 (286)
T 2zcu_A          124 MLAD----SGIVYTLLRNGWYSE  142 (286)
T ss_dssp             HHHH----HCSEEEEEEECCBHH
T ss_pred             HHHH----cCCCeEEEeChHHhh
Confidence            9875    689999999997665

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.85  E-value=1.7e-20  Score=165.27  Aligned_cols=144  Identities=16%  Similarity=0.182  Sum_probs=113.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEcc-CCCHHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD-LGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-l~d~~~v~~~~~~~~~D~l  149 (267)
                      |+|+||||||+||++++++|+++|++|++++|+....  ..+.+..    ..+++++.+| ++|.+++.++++  ++|+|
T Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~--~~~~l~~----~~~v~~v~~D~l~d~~~l~~~~~--~~d~V   77 (352)
T 1xgk_A            6 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL--IAEELQA----IPNVTLFQGPLLNNVPLMDTLFE--GAHLA   77 (352)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSH--HHHHHHT----STTEEEEESCCTTCHHHHHHHHT--TCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChh--hHHHHhh----cCCcEEEECCccCCHHHHHHHHh--cCCEE
Confidence            7899999999999999999999999999999754322  1111211    2368889999 999999999998  79999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEEeccc--cccCCCCCCCCCCCCCCCCChHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCA--TYGEPEKMPITEETPQAPINPYGKAKKM  226 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~iV~vSS~~--~~g~~~~~~~~e~~~~~~~~~Y~~sK~a  226 (267)
                      |||++...     .      ..|..+ +++++++.+.+ .++||++||.+  .|+            ..+...|+.+|.+
T Consensus        78 i~~a~~~~-----~------~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~------------~~~~~~y~~sK~~  133 (352)
T 1xgk_A           78 FINTTSQA-----G------DEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYG------------PWPAVPMWAPKFT  133 (352)
T ss_dssp             EECCCSTT-----S------CHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTS------------SCCCCTTTHHHHH
T ss_pred             EEcCCCCC-----c------HHHHHH-HHHHHHHHHcCCccEEEEeCCccccccC------------CCCCccHHHHHHH
Confidence            99987431     0      124444 88999999988 89999999975  342            1234689999999


Q ss_pred             HHHHHHHhhhcCCCcEEEEecccc
Q 024488          227 AEDIILDFSKNSDMAVMILRLVVF  250 (267)
Q Consensus       227 ~e~l~~~~a~e~g~~~~~vrp~~v  250 (267)
                      +|.+++.    .+++++++||+++
T Consensus       134 ~E~~~~~----~gi~~~ivrpg~~  153 (352)
T 1xgk_A          134 VENYVRQ----LGLPSTFVYAGIY  153 (352)
T ss_dssp             HHHHHHT----SSSCEEEEEECEE
T ss_pred             HHHHHHH----cCCCEEEEeccee
Confidence            9999987    5899999998843

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.84  E-value=3.3e-20  Score=188.11  Aligned_cols=169  Identities=15%  Similarity=0.094  Sum_probs=125.5

Q ss_pred             CcEEEEEcCCCh-hHHHHHHHHHhCCCeEEEEe-cCCCCCcchhhhh-hhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           70 VTHVLVTGGAGY-IGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVL-QELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        70 ~k~vlVTGasgg-IG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +|++|||||++| ||+++|++|+++|++|++++ |+....++..+.+ ++....+.++.++.+|++|.++++++++.   
T Consensus       675 gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~  754 (1887)
T 2uv8_A          675 DKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYD  754 (1887)
T ss_dssp             TCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            499999999998 99999999999999999985 3222222222222 22323356789999999999999988863   


Q ss_pred             -------C-CCCEEEEccccCCcC-CCccC------hHHHHHHhHHHHHHHHHHHH------HcCCCEEEEEeccccccC
Q 024488          144 -------N-AFDAVMHFAAVAYVG-ESTLD------PLKYYHNITSNTLVVLESMA------RHGVDTLIYSSTCATYGE  202 (267)
Q Consensus       144 -------~-~~D~li~~Ag~~~~~-~~~~~------~~~~~~~~~~~~~~~l~~~~------~~~~~~iV~vSS~~~~g~  202 (267)
                             + ++|+||||||+.... ...+.      .+..++.|+.++..++..+.      +++.++||++||.+.+. 
T Consensus       755 ~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~-  833 (1887)
T 2uv8_A          755 TEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTF-  833 (1887)
T ss_dssp             CTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCS-
T ss_pred             hccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhcc-
Confidence                   2 699999999987554 33322      24556677777666666552      22347999999977652 


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHHHH-HHHhhhcCC--CcEEEEeccccc
Q 024488          203 PEKMPITEETPQAPINPYGKAKKMAEDI-ILDFSKNSD--MAVMILRLVVFF  251 (267)
Q Consensus       203 ~~~~~~~e~~~~~~~~~Y~~sK~a~e~l-~~~~a~e~g--~~~~~vrp~~v~  251 (267)
                                +  ....|++||++++.| .+.++++++  +++++|+||+|.
T Consensus       834 ----------g--g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~  873 (1887)
T 2uv8_A          834 ----------G--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTR  873 (1887)
T ss_dssp             ----------S--CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEE
T ss_pred             ----------C--CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccc
Confidence                      1  356899999999999 888888744  999999999887

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.84  E-value=1.1e-19  Score=155.28  Aligned_cols=144  Identities=13%  Similarity=0.219  Sum_probs=107.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      |+||||||||+||++++++|++. |++|++++|+.......       .  ..+++++.+|++|.+++.++++  ++|+|
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-------~--~~~v~~~~~D~~d~~~l~~~~~--~~d~v   69 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-------W--RGKVSVRQLDYFNQESMVEAFK--GMDTV   69 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-------G--BTTBEEEECCTTCHHHHHHHTT--TCSEE
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-------h--hCCCEEEEcCCCCHHHHHHHHh--CCCEE
Confidence            46999999999999999999998 99999999755332211       1  2368999999999999999998  89999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (267)
                      ||+||....          ...++.+++++++++.+.+.++||++||.+..         +..+.    .+...+...|.
T Consensus        70 i~~a~~~~~----------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~---------~~~~~----~~~~~~~~~e~  126 (289)
T 3e48_A           70 VFIPSIIHP----------SFKRIPEVENLVYAAKQSGVAHIIFIGYYADQ---------HNNPF----HMSPYFGYASR  126 (289)
T ss_dssp             EECCCCCCS----------HHHHHHHHHHHHHHHHHTTCCEEEEEEESCCS---------TTCCS----TTHHHHHHHHH
T ss_pred             EEeCCCCcc----------chhhHHHHHHHHHHHHHcCCCEEEEEcccCCC---------CCCCC----ccchhHHHHHH
Confidence            999986421          12367789999999999999999999994321         01111    12222333443


Q ss_pred             HHHHhhhcCCCcEEEEecccccc
Q 024488          230 IILDFSKNSDMAVMILRLVVFFT  252 (267)
Q Consensus       230 l~~~~a~e~g~~~~~vrp~~v~~  252 (267)
                      .++    +.+++++++||+++++
T Consensus       127 ~~~----~~g~~~~ilrp~~~~~  145 (289)
T 3e48_A          127 LLS----TSGIDYTYVRMAMYMD  145 (289)
T ss_dssp             HHH----HHCCEEEEEEECEEST
T ss_pred             HHH----HcCCCEEEEecccccc
Confidence            333    3799999999995555

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.84  E-value=5e-21  Score=188.85  Aligned_cols=169  Identities=15%  Similarity=0.093  Sum_probs=123.4

Q ss_pred             CcEEEEEcCCCh-hHHHHHHHHHhCCCeEEEEe-cCCCCCcchhhhh-hhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           70 VTHVLVTGGAGY-IGSHAALRLLKDSYRVTIVD-NLSRGNIGAVKVL-QELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        70 ~k~vlVTGasgg-IG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +|++|||||++| ||+++|++|+++|++|++++ |+....++..+.+ ++....+.++.++.+|++|.++++++++.   
T Consensus       476 GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e  555 (1688)
T 2pff_A          476 DKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYD  555 (1688)
T ss_dssp             SCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHS
T ss_pred             CCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence            389999999998 99999999999999999984 4333333333333 22222245788999999999999988863   


Q ss_pred             -------C-CCCEEEEccccCCcC-CCccCh------HHHHHHhHHHHHHHHHHH------HHcCCCEEEEEeccccccC
Q 024488          144 -------N-AFDAVMHFAAVAYVG-ESTLDP------LKYYHNITSNTLVVLESM------ARHGVDTLIYSSTCATYGE  202 (267)
Q Consensus       144 -------~-~~D~li~~Ag~~~~~-~~~~~~------~~~~~~~~~~~~~~l~~~------~~~~~~~iV~vSS~~~~g~  202 (267)
                             + ++|+||||||+.... ...+..      +..++.|+.++..++..+      .+++.++||++||.+... 
T Consensus       556 ~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~-  634 (1688)
T 2pff_A          556 TEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTF-  634 (1688)
T ss_dssp             CTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTS-
T ss_pred             hccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhcc-
Confidence                   2 699999999986544 333332      344566777765555544      333447999999976652 


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHHHH-HHHhhhcCC--CcEEEEeccccc
Q 024488          203 PEKMPITEETPQAPINPYGKAKKMAEDI-ILDFSKNSD--MAVMILRLVVFF  251 (267)
Q Consensus       203 ~~~~~~~e~~~~~~~~~Y~~sK~a~e~l-~~~~a~e~g--~~~~~vrp~~v~  251 (267)
                                +  ....|++||++++.| .+.++++.+  +++++|.||+|.
T Consensus       635 ----------G--g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~  674 (1688)
T 2pff_A          635 ----------G--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTR  674 (1688)
T ss_dssp             ----------S--CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCC
T ss_pred             ----------C--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCc
Confidence                      1  357899999999999 677777643  889999999887

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.83  E-value=3.8e-20  Score=178.42  Aligned_cols=169  Identities=19%  Similarity=0.240  Sum_probs=134.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHH-hCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLL-KDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +++++||||+||||+++|+.|+ ++|+ +|++++|+....+...+.++++...+.++.++.||++|.+++++++++    
T Consensus       530 ~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~  609 (795)
T 3slk_A          530 AGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDE  609 (795)
T ss_dssp             TSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             ccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Confidence            4899999999999999999999 7999 599999875555556666666655577899999999999999999876    


Q ss_pred             CCCCEEEEccccCCcCCCccChH----HHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCCh
Q 024488          144 NAFDAVMHFAAVAYVGESTLDPL----KYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~  219 (267)
                      .++|+||||||+.......+...    ..++.|+.++.++...+.. .. +||++||.+.+-           +.+....
T Consensus       610 ~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~l-~iV~~SS~ag~~-----------g~~g~~~  676 (795)
T 3slk_A          610 HPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-DV-ALVLFSSVSGVL-----------GSGGQGN  676 (795)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-TS-EEEEEEETHHHH-----------TCSSCHH
T ss_pred             CCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-CC-EEEEEccHHhcC-----------CCCCCHH
Confidence            47999999999976555444333    3445677788888777632 23 899999987752           3455789


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCcEEEEecccccc
Q 024488          220 YGKAKKMAEDIILDFSKNSDMAVMILRLVVFFT  252 (267)
Q Consensus       220 Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~  252 (267)
                      |+++|...+.|++.++. .|++++.|.||.+.+
T Consensus       677 YaAaka~~~alA~~~~~-~Gi~v~sI~pG~v~t  708 (795)
T 3slk_A          677 YAAANSFLDALAQQRQS-RGLPTRSLAWGPWAE  708 (795)
T ss_dssp             HHHHHHHHHHHHHHHHH-TTCCEEEEEECCCSC
T ss_pred             HHHHHHHHHHHHHHHHH-cCCeEEEEECCeECc
Confidence            99999988888888766 699999999996654

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.83  E-value=3e-20  Score=188.08  Aligned_cols=172  Identities=16%  Similarity=0.093  Sum_probs=124.2

Q ss_pred             CcEEEEEcCCCh-hHHHHHHHHHhCCCeEEEEecC-CCCCcchhhhh-hhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           70 VTHVLVTGGAGY-IGSHAALRLLKDSYRVTIVDNL-SRGNIGAVKVL-QELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        70 ~k~vlVTGasgg-IG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +|+||||||++| ||+++|++|+++|++|+++++. ....++..+.+ +++...+.++.++.+|++|.++++++++.   
T Consensus       652 gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~  731 (1878)
T 2uv9_A          652 GKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYD  731 (1878)
T ss_dssp             TCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            399999999999 9999999999999999998642 21111222222 33333356789999999999999988863   


Q ss_pred             -----C-CCCEEEEccccCCcC-CCccC------hHHHHHHhHHHHHHHHHH------HHHcCCCEEEEEeccccccCCC
Q 024488          144 -----N-AFDAVMHFAAVAYVG-ESTLD------PLKYYHNITSNTLVVLES------MARHGVDTLIYSSTCATYGEPE  204 (267)
Q Consensus       144 -----~-~~D~li~~Ag~~~~~-~~~~~------~~~~~~~~~~~~~~~l~~------~~~~~~~~iV~vSS~~~~g~~~  204 (267)
                           + ++|+||||||+.... ...+.      .+..++.|+.++..++..      |.+++.++||++||.+.+.   
T Consensus       732 ~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~---  808 (1878)
T 2uv9_A          732 TKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTF---  808 (1878)
T ss_dssp             SSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSS---
T ss_pred             hhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhcc---
Confidence                 2 699999999986554 33333      244566777766554433      3333457999999976652   


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc-C--CCcEEEEeccccc-ccc
Q 024488          205 KMPITEETPQAPINPYGKAKKMAEDIILDFSKN-S--DMAVMILRLVVFF-TLV  254 (267)
Q Consensus       205 ~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e-~--g~~~~~vrp~~v~-~~~  254 (267)
                              +  ....|++||++++.|++.++.+ .  .+++++|.||+|. |.+
T Consensus       809 --------g--g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m  852 (1878)
T 2uv9_A          809 --------G--NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGL  852 (1878)
T ss_dssp             --------S--CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTS
T ss_pred             --------C--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcc
Confidence                    1  2568999999999998876544 2  3999999999887 543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.82  E-value=1.4e-19  Score=156.24  Aligned_cols=156  Identities=18%  Similarity=0.232  Sum_probs=115.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCC-cchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN-IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +|+|+||||||+||++++++|+++|++|++++|+.... .+..+.++++.  ..+++++.+|++|.+++.++++  ++|+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~--~~d~   79 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDALK--QVDV   79 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHHT--TCSE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHH--hCCeEEEeCCCCCHHHHHHHHh--CCCE
Confidence            47899999999999999999999999999999864332 11112222221  2368889999999999999998  7999


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCCC-CChHHHHHHH
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP-INPYGKAKKM  226 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~~-~~~Y~~sK~a  226 (267)
                      |||+|+.....           .++.++.++++++.+.+ .++||+ |   .||......   ..+..+ ...| .+|.+
T Consensus        80 vi~~a~~~~~~-----------~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~---~~~~~p~~~~y-~sK~~  140 (313)
T 1qyd_A           80 VISALAGGVLS-----------HHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM---EHALQPGSITF-IDKRK  140 (313)
T ss_dssp             EEECCCCSSSS-----------TTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC---CCCCSSTTHHH-HHHHH
T ss_pred             EEECCccccch-----------hhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc---ccCCCCCcchH-HHHHH
Confidence            99999865321           14566788999999998 899985 3   344221111   122223 4578 99999


Q ss_pred             HHHHHHHhhhcCCCcEEEEecccccc
Q 024488          227 AEDIILDFSKNSDMAVMILRLVVFFT  252 (267)
Q Consensus       227 ~e~l~~~~a~e~g~~~~~vrp~~v~~  252 (267)
                      +|.+++.    .+++++++||+++++
T Consensus       141 ~e~~~~~----~g~~~~ilrp~~~~~  162 (313)
T 1qyd_A          141 VRRAIEA----ASIPYTYVSSNMFAG  162 (313)
T ss_dssp             HHHHHHH----TTCCBCEEECCEEHH
T ss_pred             HHHHHHh----cCCCeEEEEeceecc
Confidence            9998865    789999999997776

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.81  E-value=1.3e-19  Score=156.15  Aligned_cols=151  Identities=15%  Similarity=0.242  Sum_probs=112.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCC--cchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN--IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      |++|+||||||+||++++++|+++|++|++++|+....  .+..+.++++.  ..+++++.+|++|.+++.++++  ++|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~--~~d   79 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVK--NVD   79 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHH--TCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHc--CCC
Confidence            57899999999999999999999999999999864322  11222222221  2368889999999999999998  799


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCCC-CChHHHHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP-INPYGKAKK  225 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~~-~~~Y~~sK~  225 (267)
                      +|||+|+...               +.++.++++++.+.+ .++||+ |+   ||..    .+|..+..+ ...| .+|.
T Consensus        80 ~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~----~~~~~~~~p~~~~y-~sK~  135 (308)
T 1qyc_A           80 VVISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFP-SE---FGND----VDNVHAVEPAKSVF-EVKA  135 (308)
T ss_dssp             EEEECCCGGG---------------SGGGHHHHHHHHHHCCCSEEEC-SC---CSSC----TTSCCCCTTHHHHH-HHHH
T ss_pred             EEEECCcchh---------------hhhHHHHHHHHHhcCCCceEee-cc---cccC----ccccccCCcchhHH-HHHH
Confidence            9999998531               234578899999988 889984 43   4321    122223333 4578 9999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEecccccc
Q 024488          226 MAEDIILDFSKNSDMAVMILRLVVFFT  252 (267)
Q Consensus       226 a~e~l~~~~a~e~g~~~~~vrp~~v~~  252 (267)
                      ++|.+++.    .+++++++||+++++
T Consensus       136 ~~e~~~~~----~~~~~~~~r~~~~~~  158 (308)
T 1qyc_A          136 KVRRAIEA----EGIPYTYVSSNCFAG  158 (308)
T ss_dssp             HHHHHHHH----HTCCBEEEECCEEHH
T ss_pred             HHHHHHHh----cCCCeEEEEeceecc
Confidence            99998876    589999999997765

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.81  E-value=2e-19  Score=154.82  Aligned_cols=153  Identities=14%  Similarity=0.211  Sum_probs=113.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCC-c--chhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN-I--GAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~-~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (267)
                      |++|+||||||+||++++++|+++|++|++++|+.... .  +..+.++++.  ..+++++.+|++|.+++.++++  ++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~--~~   77 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQ--SLGVILLEGDINDHETLVKAIK--QV   77 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHT--TC
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHH--hCCCEEEEeCCCCHHHHHHHHh--CC
Confidence            57899999999999999999999999999999864111 0  1111122221  1358889999999999999998  79


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCCC-CChHHHHH
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP-INPYGKAK  224 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~~-~~~Y~~sK  224 (267)
                      |+|||+|+...               +.++.++++++.+.+ .++||+ |   .||..    .++..+..+ ...| .+|
T Consensus        78 d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~~~~y-~sK  133 (307)
T 2gas_A           78 DIVICAAGRLL---------------IEDQVKIIKAIKEAGNVKKFFP-S---EFGLD----VDRHDAVEPVRQVF-EEK  133 (307)
T ss_dssp             SEEEECSSSSC---------------GGGHHHHHHHHHHHCCCSEEEC-S---CCSSC----TTSCCCCTTHHHHH-HHH
T ss_pred             CEEEECCcccc---------------cccHHHHHHHHHhcCCceEEee-c---ccccC----cccccCCCcchhHH-HHH
Confidence            99999998642               335678899999888 889983 3   34321    122223233 4579 999


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEecccccccc
Q 024488          225 KMAEDIILDFSKNSDMAVMILRLVVFFTLV  254 (267)
Q Consensus       225 ~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~  254 (267)
                      .++|.+++.    .+++++++||+++++..
T Consensus       134 ~~~e~~~~~----~~i~~~~lrp~~~~~~~  159 (307)
T 2gas_A          134 ASIRRVIEA----EGVPYTYLCCHAFTGYF  159 (307)
T ss_dssp             HHHHHHHHH----HTCCBEEEECCEETTTT
T ss_pred             HHHHHHHHH----cCCCeEEEEcceeeccc
Confidence            999998875    58999999999877643

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.80  E-value=3.3e-19  Score=154.53  Aligned_cols=147  Identities=18%  Similarity=0.294  Sum_probs=110.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      ++|+||||||+||++++++|+++|++|++++|+....   .+.++++.  ..+++++.+|++|.+++.++++  ++|+||
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~---~~~~~~l~--~~~v~~v~~Dl~d~~~l~~a~~--~~d~vi   84 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSK---TTLLDEFQ--SLGAIIVKGELDEHEKLVELMK--KVDVVI   84 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSC---HHHHHHHH--HTTCEEEECCTTCHHHHHHHHT--TCSEEE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCch---hhHHHHhh--cCCCEEEEecCCCHHHHHHHHc--CCCEEE
Confidence            6899999999999999999999999999999865321   11122111  1358889999999999999998  799999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCCC-CChHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP-INPYGKAKKMAE  228 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~~-~~~Y~~sK~a~e  228 (267)
                      |+|+...               +..++++++++.+.+ .++||+ |+   ||..    .++..+..+ ...| .+|.++|
T Consensus        85 ~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~----~~~~~~~~p~~~~y-~sK~~~e  140 (318)
T 2r6j_A           85 SALAFPQ---------------ILDQFKILEAIKVAGNIKRFLP-SD---FGVE----EDRINALPPFEALI-ERKRMIR  140 (318)
T ss_dssp             ECCCGGG---------------STTHHHHHHHHHHHCCCCEEEC-SC---CSSC----TTTCCCCHHHHHHH-HHHHHHH
T ss_pred             ECCchhh---------------hHHHHHHHHHHHhcCCCCEEEe-ec---cccC----cccccCCCCcchhH-HHHHHHH
Confidence            9998531               335678999999888 889985 33   4321    122222222 3568 9999999


Q ss_pred             HHHHHhhhcCCCcEEEEecccccc
Q 024488          229 DIILDFSKNSDMAVMILRLVVFFT  252 (267)
Q Consensus       229 ~l~~~~a~e~g~~~~~vrp~~v~~  252 (267)
                      .+++.    .+++++++||+++++
T Consensus       141 ~~~~~----~~~~~~~lr~~~~~~  160 (318)
T 2r6j_A          141 RAIEE----ANIPYTYVSANCFAS  160 (318)
T ss_dssp             HHHHH----TTCCBEEEECCEEHH
T ss_pred             HHHHh----cCCCeEEEEcceehh
Confidence            98875    789999999997765

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.79  E-value=1.7e-19  Score=156.40  Aligned_cols=152  Identities=15%  Similarity=0.246  Sum_probs=112.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC-CCC-cchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS-RGN-IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~-~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      ||+|+||||||+||++++++|+++|++|++++|+. ... ....+.++++.  ..+++++.+|++|.+++.++++  ++|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~--~~~v~~v~~D~~d~~~l~~a~~--~~d   79 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR--SMGVTIIEGEMEEHEKMVSVLK--QVD   79 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHT--TCS
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh--cCCcEEEEecCCCHHHHHHHHc--CCC
Confidence            47899999999999999999999999999999864 211 11112222221  2358899999999999999998  799


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCCC-CChHHHHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP-INPYGKAKK  225 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~~-~~~Y~~sK~  225 (267)
                      +|||+|+...               +..++++++++.+.+ .++||. |   .||..    .+|..+..+ .+.| .+|.
T Consensus        80 ~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~~~~y-~sK~  135 (321)
T 3c1o_A           80 IVISALPFPM---------------ISSQIHIINAIKAAGNIKRFLP-S---DFGCE----EDRIKPLPPFESVL-EKKR  135 (321)
T ss_dssp             EEEECCCGGG---------------SGGGHHHHHHHHHHCCCCEEEC-S---CCSSC----GGGCCCCHHHHHHH-HHHH
T ss_pred             EEEECCCccc---------------hhhHHHHHHHHHHhCCccEEec-c---ccccC----ccccccCCCcchHH-HHHH
Confidence            9999998532               345678999999988 889983 3   34321    112222222 4579 9999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEeccccccc
Q 024488          226 MAEDIILDFSKNSDMAVMILRLVVFFTL  253 (267)
Q Consensus       226 a~e~l~~~~a~e~g~~~~~vrp~~v~~~  253 (267)
                      ++|.+++.    .+++++++||+++++.
T Consensus       136 ~~e~~~~~----~~~~~~~lrp~~~~~~  159 (321)
T 3c1o_A          136 IIRRAIEA----AALPYTYVSANCFGAY  159 (321)
T ss_dssp             HHHHHHHH----HTCCBEEEECCEEHHH
T ss_pred             HHHHHHHH----cCCCeEEEEeceeccc
Confidence            99998875    5899999999977663

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.76  E-value=1.7e-17  Score=175.40  Aligned_cols=169  Identities=11%  Similarity=-0.004  Sum_probs=117.0

Q ss_pred             CcEEEEEcCCCh-hHHHHHHHHHhCCCeEEEEecCCCCC--cchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           70 VTHVLVTGGAGY-IGSHAALRLLKDSYRVTIVDNLSRGN--IGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        70 ~k~vlVTGasgg-IG~~la~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +|++|||||++| ||+++|+.|+++|++|++++|+....  +.+.+..+++...+.++..+.+|++|.++++++++.   
T Consensus      2136 gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~~ 2215 (3089)
T 3zen_D         2136 DEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVGT 2215 (3089)
T ss_dssp             CCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHTS
T ss_pred             CCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHHh
Confidence            499999999999 99999999999999999999743320  013334445544466788999999999999988643   


Q ss_pred             ------CCCCEEEEcccc----CCc-CC----CccCh----HHHHHHhHHHHH----HHHHHHHHcCCC---EEE-EEec
Q 024488          144 ------NAFDAVMHFAAV----AYV-GE----STLDP----LKYYHNITSNTL----VVLESMARHGVD---TLI-YSST  196 (267)
Q Consensus       144 ------~~~D~li~~Ag~----~~~-~~----~~~~~----~~~~~~~~~~~~----~~l~~~~~~~~~---~iV-~vSS  196 (267)
                            +++|+||||||+    ... ..    ..++.    +..++.|..++.    .+.+.|.+.+.+   .+| ..|+
T Consensus      2216 ~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ss 2295 (3089)
T 3zen_D         2216 EQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPGSP 2295 (3089)
T ss_dssp             CCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEECS
T ss_pred             hhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEECCc
Confidence                  679999999997    111 11    11122    222555665544    455666665432   222 2333


Q ss_pred             cccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc--C--CCcEEEEeccccc
Q 024488          197 CATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN--S--DMAVMILRLVVFF  251 (267)
Q Consensus       197 ~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e--~--g~~~~~vrp~~v~  251 (267)
                      ...             .......|++||++++.|+++++.|  .  +++++.+.||+|.
T Consensus      2296 ~~g-------------~~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~ 2341 (3089)
T 3zen_D         2296 NRG-------------MFGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTK 2341 (3089)
T ss_dssp             STT-------------SCSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEE
T ss_pred             ccc-------------cCCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccC
Confidence            211             1123458999999999999999998  3  5789999999776

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.75  E-value=2.7e-19  Score=156.09  Aligned_cols=172  Identities=15%  Similarity=0.091  Sum_probs=123.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-------eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE  143 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~  143 (267)
                      ++|+||||+|+||++++..|+++|+       +|+++++... .+.......++...  .+.++ .|+.+.+++.++++ 
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~-~~~~~g~~~dl~~~--~~~~~-~di~~~~~~~~a~~-   79 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQA-MKALEGVVMELEDC--AFPLL-AGLEATDDPKVAFK-   79 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGG-HHHHHHHHHHHHTT--TCTTE-EEEEEESCHHHHTT-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCc-hhhccchhhhhhcc--ccccc-CCeEeccChHHHhC-
Confidence            6899999999999999999999996       8999886321 01111111122110  11222 46666555666676 


Q ss_pred             CCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC-C-CEEEEEecccc-ccCCCCCCCC-CCC-CCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-V-DTLIYSSTCAT-YGEPEKMPIT-EET-PQAPIN  218 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~-~~iV~vSS~~~-~g~~~~~~~~-e~~-~~~~~~  218 (267)
                       ++|+|||+||.....  ..++.+.++.|+.+++++++.+.+.+ . .++|++|+... ..     ++. +.. +.++..
T Consensus        80 -~~D~Vih~Ag~~~~~--~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~-----~~~~~~~~~~~p~~  151 (327)
T 1y7t_A           80 -DADYALLVGAAPRKA--GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA-----LIAYKNAPGLNPRN  151 (327)
T ss_dssp             -TCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH-----HHHHHTCTTSCGGG
T ss_pred             -CCCEEEECCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH-----HHHHHHcCCCChhh
Confidence             799999999976432  35678889999999999999999875 4 47888777441 10     011 112 345667


Q ss_pred             hHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCC
Q 024488          219 PYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       219 ~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      .|+.||...|.+...+++++|++.+.+||+       ++|||..
T Consensus       152 ~yg~tkl~~er~~~~~a~~~g~~~~~vr~~-------~V~G~h~  188 (327)
T 1y7t_A          152 FTAMTRLDHNRAKAQLAKKTGTGVDRIRRM-------TVWGNHS  188 (327)
T ss_dssp             EEECCHHHHHHHHHHHHHHHTCCGGGEECC-------EEEBCSS
T ss_pred             eeccchHHHHHHHHHHHHHhCcChhheeee-------EEEcCCC
Confidence            899999999999999998899999999999       8888864

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.73  E-value=1.7e-17  Score=175.42  Aligned_cols=169  Identities=13%  Similarity=0.052  Sum_probs=123.1

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      .+|+++||||+||||+++|+.|+++|++ |++++|+....+...+.++++...+.++.++.+|++|.+++++++++    
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence            3489999999999999999999999997 77788765544333444444433356788999999999999988875    


Q ss_pred             CCCCEEEEccccCCcCCCc----cChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGEST----LDPLKYYHNITSNTLVVLESMARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +++|+||||||+.......    +..+..++.|+.++.++...+...  ..++||++||.+..-           +.+..
T Consensus      1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~-----------g~~g~ 2031 (2512)
T 2vz8_A         1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGR-----------GNAGQ 2031 (2512)
T ss_dssp             SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHT-----------TCTTC
T ss_pred             CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcC-----------CCCCc
Confidence            6899999999986543332    333445567888887776655432  347999999977652           34457


Q ss_pred             ChHHHHHHHHHHHHHHhhhcCCCcEEEEeccc
Q 024488          218 NPYGKAKKMAEDIILDFSKNSDMAVMILRLVV  249 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~  249 (267)
                      ..|+++|++++.|++..+.+ |++...+..+.
T Consensus      2032 ~~Y~aaKaal~~l~~~rr~~-Gl~~~a~~~g~ 2062 (2512)
T 2vz8_A         2032 ANYGFANSAMERICEKRRHD-GLPGLAVQWGA 2062 (2512)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT-TSCCCEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHHC-CCcEEEEEccC
Confidence            79999999999999987764 88888877773

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.62  E-value=1.5e-14  Score=126.67  Aligned_cols=177  Identities=12%  Similarity=-0.020  Sum_probs=114.9

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHH-hCCCeEEEEecCCCCCcch---------hhhhhhcCCCCCceEEEEccCCCHHHHH
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLL-KDSYRVTIVDNLSRGNIGA---------VKVLQELFPEPGRLQFIYADLGDAKAVN  138 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~-~~G~~V~~~~r~~~~~~~~---------~~~~~~~~~~~~~~~~~~~Dl~d~~~v~  138 (267)
                      ++|+|||||||+|||++++..|+ +.|++|+++.+.....++.         ....+.+.+.+..+..+.||++|.++++
T Consensus        49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~  128 (401)
T 4ggo_A           49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKA  128 (401)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHH
Confidence            35999999999999999999998 6799999998654333221         1111223334678999999999999999


Q ss_pred             HHhhc-----CCCCEEEEccccCCcCCCc----------------------------------cChHHHHHHhHHH---H
Q 024488          139 KFFSE-----NAFDAVMHFAAVAYVGEST----------------------------------LDPLKYYHNITSN---T  176 (267)
Q Consensus       139 ~~~~~-----~~~D~li~~Ag~~~~~~~~----------------------------------~~~~~~~~~~~~~---~  176 (267)
                      ++++.     +++|+|||+++.......+                                  ...++.++.....   .
T Consensus       129 ~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~s  208 (401)
T 4ggo_A          129 QVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGGE  208 (401)
T ss_dssp             HHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred             HHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhhh
Confidence            99887     8999999999975211100                                  0011112111111   0


Q ss_pred             --HHHHHHHHHc----CCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhcC-CCcEEEEeccc
Q 024488          177 --LVVLESMARH----GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS-DMAVMILRLVV  249 (267)
Q Consensus       177 --~~~l~~~~~~----~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e~-g~~~~~vrp~~  249 (267)
                        .....++...    .++++|..|+.+.--.         .|.-....+|.+|+++|..++.++.+. ++++.++.++.
T Consensus       209 ~~s~w~~al~~a~lla~G~siva~SYiGse~t---------~P~Y~~G~mG~AKaaLEa~~r~La~eL~~~~a~v~v~~a  279 (401)
T 4ggo_A          209 DWERWIKQLSKEGLLEEGCITLAYSYIGPEAT---------QALYRKGTIGKAKEHLEATAHRLNKENPSIRAFVSVNKG  279 (401)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG---------HHHHTTSHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCC
T ss_pred             HHHHHHHHHHhhhcccCCceEEEEeccCccee---------ecCCCccHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcCc
Confidence              0122233332    2468898888543100         011124578999999999999999984 56777777776


Q ss_pred             ccccc
Q 024488          250 FFTLV  254 (267)
Q Consensus       250 v~~~~  254 (267)
                      +.|.-
T Consensus       280 ~vT~A  284 (401)
T 4ggo_A          280 LVTRA  284 (401)
T ss_dssp             CCCTT
T ss_pred             cccch
Confidence            66643

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.20  E-value=2.3e-11  Score=103.85  Aligned_cols=81  Identities=15%  Similarity=0.151  Sum_probs=63.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|+++||||+||||++++++|+++|++|++++|+..+.+++.+.+...    .++.++.+|++|.++++++++  .+|+|
T Consensus       119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~----~~~~~~~~D~~~~~~~~~~~~--~~Dvl  192 (287)
T 1lu9_A          119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR----FKVNVTAAETADDASRAEAVK--GAHFV  192 (287)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH----HTCCCEEEECCSHHHHHHHTT--TCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc----CCcEEEEecCCCHHHHHHHHH--hCCEE
Confidence            389999999999999999999999999999997533222222222211    135678899999999999988  68999


Q ss_pred             EEccccC
Q 024488          150 MHFAAVA  156 (267)
Q Consensus       150 i~~Ag~~  156 (267)
                      |||||..
T Consensus       193 Vn~ag~g  199 (287)
T 1lu9_A          193 FTAGAIG  199 (287)
T ss_dssp             EECCCTT
T ss_pred             EECCCcc
Confidence            9999864

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.18  E-value=9.4e-11  Score=85.91  Aligned_cols=93  Identities=25%  Similarity=0.250  Sum_probs=70.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +++|+|+|+ |++|+++++.|.+.| ++|++++|+..   ...+ +.     ...+.++.+|+++.+++.++++  ++|+
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~---~~~~-~~-----~~~~~~~~~d~~~~~~~~~~~~--~~d~   72 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLA---ALAV-LN-----RMGVATKQVDAKDEAGLAKALG--GFDA   72 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHH---HHHH-HH-----TTTCEEEECCTTCHHHHHHHTT--TCSE
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHH---HHHH-HH-----hCCCcEEEecCCCHHHHHHHHc--CCCE
Confidence            489999999 999999999999999 99999996432   2211 11     2356778999999999999987  8999


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEE
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI  192 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV  192 (267)
                      |||+++..                  .+..++..+.+.+..++.
T Consensus        73 vi~~~~~~------------------~~~~~~~~~~~~g~~~~~   98 (118)
T 3ic5_A           73 VISAAPFF------------------LTPIIAKAAKAAGAHYFD   98 (118)
T ss_dssp             EEECSCGG------------------GHHHHHHHHHHTTCEEEC
T ss_pred             EEECCCch------------------hhHHHHHHHHHhCCCEEE
Confidence            99998531                  124566777777654443

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.04  E-value=2.8e-10  Score=98.98  Aligned_cols=171  Identities=12%  Similarity=0.046  Sum_probs=108.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-------eEEEEecCCCC-CcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhh
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRG-NIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS  142 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-------~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~  142 (267)
                      ++|+||||+|+||++++..|+..|.       +|+++++.... .+.+.....++......+   ..|+...++..++++
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~---~~~i~~~~~~~~al~   82 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL---LAGMTAHADPMTAFK   82 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT---EEEEEEESSHHHHTT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc---cCcEEEecCcHHHhC
Confidence            6899999999999999999999885       79998853000 111211112221110011   124443344566666


Q ss_pred             cCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC-C-CEEEEEecccc---ccCCCCCCCCCCC-CCCC
Q 024488          143 ENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-V-DTLIYSSTCAT---YGEPEKMPITEET-PQAP  216 (267)
Q Consensus       143 ~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~-~~iV~vSS~~~---~g~~~~~~~~e~~-~~~~  216 (267)
                        +.|+|||.||....  ......+.+..|...++.+++.+.+.. . .+||++|.-.-   +.-      .+.. ..++
T Consensus        83 --~aD~Vi~~ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~------~~~~~~~p~  152 (329)
T 1b8p_A           83 --DADVALLVGARPRG--PGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIA------MKSAPSLPA  152 (329)
T ss_dssp             --TCSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH------HHTCTTSCG
T ss_pred             --CCCEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHH------HHHcCCCCH
Confidence              78999999997532  234567788999999999999999884 4 48888887321   100      0001 1223


Q ss_pred             CChHHHHHHHHHHHHHHhhhcCCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~  254 (267)
                      ...|+.++.-...+...+++..|++...++...|+++|
T Consensus       153 ~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~H  190 (329)
T 1b8p_A          153 KNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNH  190 (329)
T ss_dssp             GGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCS
T ss_pred             HHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEecc
Confidence            34577777777788888888778766666655344443

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.97  E-value=2.2e-09  Score=87.81  Aligned_cols=75  Identities=20%  Similarity=0.181  Sum_probs=56.5

Q ss_pred             CcEEEEEcC----------------CChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC
Q 024488           70 VTHVLVTGG----------------AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD  133 (267)
Q Consensus        70 ~k~vlVTGa----------------sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d  133 (267)
                      +|+||||||                ||+||.++|++|+++|++|+++++.. ..+        .   +..+  -.+|+++
T Consensus         8 gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~-~l~--------~---~~g~--~~~dv~~   73 (226)
T 1u7z_A            8 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPV-SLP--------T---PPFV--KRVDVMT   73 (226)
T ss_dssp             TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSC-CCC--------C---CTTE--EEEECCS
T ss_pred             CCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCc-ccc--------c---CCCC--eEEccCc
Confidence            499999999                79999999999999999999988632 110        0   1123  3568888


Q ss_pred             HHHHHHHhhc--CCCCEEEEccccCCc
Q 024488          134 AKAVNKFFSE--NAFDAVMHFAAVAYV  158 (267)
Q Consensus       134 ~~~v~~~~~~--~~~D~li~~Ag~~~~  158 (267)
                      .+++.+.+.+  +++|++|||||+...
T Consensus        74 ~~~~~~~v~~~~~~~Dili~~Aav~d~  100 (226)
T 1u7z_A           74 ALEMEAAVNASVQQQNIFIGCAAVADY  100 (226)
T ss_dssp             HHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             HHHHHHHHHHhcCCCCEEEECCcccCC
Confidence            7776555533  579999999998643

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.90  E-value=1.6e-08  Score=87.80  Aligned_cols=115  Identities=12%  Similarity=0.121  Sum_probs=80.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      ++|+||||+|++|..++..|+.+|  .+|+++++...  +.....+.+.. ....+..    +.+.+++.++++  +.|+
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~-~~~~v~~----~~~t~d~~~al~--gaDv   79 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMD-TGAVVRG----FLGQQQLEAALT--GMDL   79 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSC-SSCEEEE----EESHHHHHHHHT--TCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhccc-ccceEEE----EeCCCCHHHHcC--CCCE
Confidence            689999999999999999999999  89999885432  11111122211 0112222    234566777777  8899


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEec
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS  196 (267)
                      |||+||.....  .....+.+..|..+++.+++.+.+.+...+|+++|
T Consensus        80 Vi~~ag~~~~~--g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S  125 (326)
T 1smk_A           80 IIVPAGVPRKP--GMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS  125 (326)
T ss_dssp             EEECCCCCCCS--SCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EEEcCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            99999965322  22345678899999999999999988766777766

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.84  E-value=5.3e-09  Score=93.46  Aligned_cols=82  Identities=16%  Similarity=0.236  Sum_probs=62.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC---CeEEEEecCCCCCcchhhhhhhcCC-CCCceEEEEccCCCHHHHHHHhhcCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS---YRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENA  145 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (267)
                      |++|+|+|| |+||+++++.|++.|   .+|++++|+..   ++.+..+++.. .+.++..+.+|++|.+++++++++.+
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~---~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~   76 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLS---KCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVK   76 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHH---HHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHH---HHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhC
Confidence            578999998 999999999999998   48999996543   33333333211 12358889999999999999998545


Q ss_pred             CCEEEEcccc
Q 024488          146 FDAVMHFAAV  155 (267)
Q Consensus       146 ~D~li~~Ag~  155 (267)
                      +|+|||+|+.
T Consensus        77 ~DvVin~ag~   86 (405)
T 4ina_A           77 PQIVLNIALP   86 (405)
T ss_dssp             CSEEEECSCG
T ss_pred             CCEEEECCCc
Confidence            8999999974

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.83  E-value=1.2e-08  Score=83.64  Aligned_cols=78  Identities=21%  Similarity=0.307  Sum_probs=55.8

Q ss_pred             CcEEEEEcC----------------CChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC
Q 024488           70 VTHVLVTGG----------------AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD  133 (267)
Q Consensus        70 ~k~vlVTGa----------------sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d  133 (267)
                      +|+||||||                ||++|.++|++|+++|++|+++.+...-. .         ..+..+..  .|+.+
T Consensus         3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~-~---------~~~~~~~~--~~v~s   70 (232)
T 2gk4_A            3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALK-P---------EPHPNLSI--REITN   70 (232)
T ss_dssp             CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCC-C---------CCCTTEEE--EECCS
T ss_pred             CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-c---------cCCCCeEE--EEHhH
Confidence            389999999                89999999999999999999999743210 0         00123443  46666


Q ss_pred             HHHHHHHhhc--CCCCEEEEccccCCcC
Q 024488          134 AKAVNKFFSE--NAFDAVMHFAAVAYVG  159 (267)
Q Consensus       134 ~~~v~~~~~~--~~~D~li~~Ag~~~~~  159 (267)
                      .+++.+.+..  +++|++|||||+....
T Consensus        71 ~~em~~~v~~~~~~~Dili~aAAvsD~~   98 (232)
T 2gk4_A           71 TKDLLIEMQERVQDYQVLIHSMAVSDYT   98 (232)
T ss_dssp             HHHHHHHHHHHGGGCSEEEECSBCCSEE
T ss_pred             HHHHHHHHHHhcCCCCEEEEcCcccccc
Confidence            6655544433  5799999999986543

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.80  E-value=2.1e-08  Score=86.58  Aligned_cols=165  Identities=13%  Similarity=0.104  Sum_probs=96.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEEec--CCCCCcchhhhhhhcCC-CCCceEEEEccCCCHHHHHHHhhcCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDN--LSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r--~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (267)
                      ++|+||||+|++|++++..|+..|.  ++.++++  .....+.....+..... .+..+.+...|    +++.++++  +
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~--g   74 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRIID--E   74 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGT--T
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhC--C
Confidence            3799999999999999999999885  6888875  21111111111221111 11222222211    12344555  8


Q ss_pred             CCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHH-HH
Q 024488          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGK-AK  224 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~-sK  224 (267)
                      .|+|||.||....  ......+.+..|..+++.+++.+.+.+ ..+|+++|.-+.-...  -.......++...+|. +.
T Consensus        75 aD~Vi~~Ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv~~~t~--~~~k~~~~p~~rviG~gt~  149 (313)
T 1hye_A           75 SDVVIITSGVPRK--EGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPVDVMTY--KALVDSKFERNQVFGLGTH  149 (313)
T ss_dssp             CSEEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSHHHHHH--HHHHHHCCCTTSEEECTTH
T ss_pred             CCEEEECCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcHHHHHH--HHHHhhCcChhcEEEeCcc
Confidence            9999999997532  234556788999999999999999988 7777777732210000  0000012344455665 55


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEe
Q 024488          225 KMAEDIILDFSKNSDMAVMILR  246 (267)
Q Consensus       225 ~a~e~l~~~~a~e~g~~~~~vr  246 (267)
                      .-...+...+++..|++...++
T Consensus       150 LD~~r~~~~la~~lgv~~~~v~  171 (313)
T 1hye_A          150 LDSLRFKVAIAKFFGVHIDEVR  171 (313)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGEE
T ss_pred             HHHHHHHHHHHHHhCcCHHHeE
Confidence            5556666666666665443344

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.78  E-value=3.8e-08  Score=74.27  Aligned_cols=102  Identities=11%  Similarity=0.060  Sum_probs=69.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHH-hhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~-~~~~~~D~  148 (267)
                      +++|+|+|+ |++|+.+++.|.+.|++|++++++.   +..    ++...  .....+.+|.++.+.+.++ +.  ++|+
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~---~~~----~~~~~--~~~~~~~~d~~~~~~l~~~~~~--~~d~   73 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINE---EKV----NAYAS--YATHAVIANATEENELLSLGIR--NFEY   73 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCH---HHH----HTTTT--TCSEEEECCTTCHHHHHTTTGG--GCSE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCH---HHH----HHHHH--hCCEEEEeCCCCHHHHHhcCCC--CCCE
Confidence            478999997 9999999999999999999998632   111    11111  1245678999998888765 44  7899


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEecccc
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCAT  199 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~  199 (267)
                      +|++++..            .    ..+..+...+++.+.+++|..++...
T Consensus        74 vi~~~~~~------------~----~~~~~~~~~~~~~~~~~ii~~~~~~~  108 (144)
T 2hmt_A           74 VIVAIGAN------------I----QASTLTTLLLKELDIPNIWVKAQNYY  108 (144)
T ss_dssp             EEECCCSC------------H----HHHHHHHHHHHHTTCSEEEEECCSHH
T ss_pred             EEECCCCc------------h----HHHHHHHHHHHHcCCCeEEEEeCCHH
Confidence            99988631            0    11223444555666667877666444

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.75  E-value=6.4e-08  Score=83.10  Aligned_cols=115  Identities=16%  Similarity=0.136  Sum_probs=76.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEEec--CCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDN--LSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (267)
                      ++|+||||+|++|.+++..|+..|.  +++++++  .....+.....+.+.......+.+.. |  +    .+.++  +.
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~--~a   71 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTA--GS   71 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGT--TC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhC--CC
Confidence            4799999999999999999998885  6888875  22111111111222111122333332 2  2    23344  78


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEec
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS  196 (267)
                      |+|||.||....  ......+.+..|..+++.+++.+.+.+...+|+++|
T Consensus        72 DvVi~~ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S  119 (303)
T 1o6z_A           72 DVVVITAGIPRQ--PGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (303)
T ss_dssp             SEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             CEEEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC
Confidence            999999997532  233456778999999999999999988777777776

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.71  E-value=4.8e-08  Score=88.38  Aligned_cols=77  Identities=19%  Similarity=0.205  Sum_probs=59.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +++|+||| +|++|+++++.|++.|++|++++|+.   +++.+..++    ...+..+.+|++|.+++.++++  ++|+|
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~---~~a~~la~~----~~~~~~~~~Dv~d~~~l~~~l~--~~DvV   72 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTL---ESAKKLSAG----VQHSTPISLDVNDDAALDAEVA--KHDLV   72 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSH---HHHHHTTTT----CTTEEEEECCTTCHHHHHHHHT--TSSEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCH---HHHHHHHHh----cCCceEEEeecCCHHHHHHHHc--CCcEE
Confidence            48899998 89999999999999999999998643   222222111    1246788999999999999887  89999


Q ss_pred             EEccccC
Q 024488          150 MHFAAVA  156 (267)
Q Consensus       150 i~~Ag~~  156 (267)
                      ||+++..
T Consensus        73 In~a~~~   79 (450)
T 1ff9_A           73 ISLIPYT   79 (450)
T ss_dssp             EECCC--
T ss_pred             EECCccc
Confidence            9999864

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.63  E-value=2.6e-07  Score=69.88  Aligned_cols=74  Identities=18%  Similarity=0.149  Sum_probs=56.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      |++++|+|+ |.+|+++++.|.++|++|+++++++   +.. +.+.+     ....++.+|.++++.++++- ..+.|++
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~---~~~-~~~~~-----~~~~~~~gd~~~~~~l~~~~-~~~~d~v   74 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSK---EKI-ELLED-----EGFDAVIADPTDESFYRSLD-LEGVSAV   74 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCH---HHH-HHHHH-----TTCEEEECCTTCHHHHHHSC-CTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCH---HHH-HHHHH-----CCCcEEECCCCCHHHHHhCC-cccCCEE
Confidence            578999997 8999999999999999999999633   222 22222     14677899999999888762 2378999


Q ss_pred             EEccc
Q 024488          150 MHFAA  154 (267)
Q Consensus       150 i~~Ag  154 (267)
                      |.+.+
T Consensus        75 i~~~~   79 (141)
T 3llv_A           75 LITGS   79 (141)
T ss_dssp             EECCS
T ss_pred             EEecC
Confidence            98764

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.55  E-value=6.1e-08  Score=75.10  Aligned_cols=76  Identities=16%  Similarity=0.092  Sum_probs=54.8

Q ss_pred             ChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH--HHHHHHhhc-----CCCCEEEEc
Q 024488           80 GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA--KAVNKFFSE-----NAFDAVMHF  152 (267)
Q Consensus        80 ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~v~~~~~~-----~~~D~li~~  152 (267)
                      +.++.++++.|++.|++|++..|.........+..+.....+.++..+++|++++  ++++++++.     ++ |+||||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnn  104 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHC  104 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEEC
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEEC
Confidence            5789999999999999999988754332221111122222355788889999998  888887764     56 999999


Q ss_pred             cccC
Q 024488          153 AAVA  156 (267)
Q Consensus       153 Ag~~  156 (267)
                      ||..
T Consensus       105 Agg~  108 (157)
T 3gxh_A          105 LANY  108 (157)
T ss_dssp             SBSH
T ss_pred             CCCC
Confidence            9863

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.47  E-value=4.2e-07  Score=82.43  Aligned_cols=76  Identities=20%  Similarity=0.264  Sum_probs=59.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +++|+|+|+ |++|++++..|++. |++|++++|+.   +++.+..++     ..+..+.+|+.|.+++.++++  ++|+
T Consensus        23 ~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~---~ka~~la~~-----~~~~~~~~D~~d~~~l~~~l~--~~Dv   91 (467)
T 2axq_A           23 GKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTL---ANAQALAKP-----SGSKAISLDVTDDSALDKVLA--DNDV   91 (467)
T ss_dssp             CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSH---HHHHHHHGG-----GTCEEEECCTTCHHHHHHHHH--TSSE
T ss_pred             CCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCH---HHHHHHHHh-----cCCcEEEEecCCHHHHHHHHc--CCCE
Confidence            489999997 99999999999998 78999998643   222222222     135667899999999998887  7999


Q ss_pred             EEEccccC
Q 024488          149 VMHFAAVA  156 (267)
Q Consensus       149 li~~Ag~~  156 (267)
                      |||+++..
T Consensus        92 VIn~tp~~   99 (467)
T 2axq_A           92 VISLIPYT   99 (467)
T ss_dssp             EEECSCGG
T ss_pred             EEECCchh
Confidence            99999864

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.47  E-value=1.6e-07  Score=75.14  Aligned_cols=100  Identities=14%  Similarity=0.066  Sum_probs=63.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhh---cCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS---ENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~---~~~~  146 (267)
                      +++|+||||+|+||..+++.+...|++|++++++.   +. .+.+++.   +...   .+|..+.+..+.+.+   ..++
T Consensus        39 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~---~~-~~~~~~~---g~~~---~~d~~~~~~~~~~~~~~~~~~~  108 (198)
T 1pqw_A           39 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD---AK-REMLSRL---GVEY---VGDSRSVDFADEILELTDGYGV  108 (198)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSH---HH-HHHHHTT---CCSE---EEETTCSTHHHHHHHHTTTCCE
T ss_pred             CCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCH---HH-HHHHHHc---CCCE---EeeCCcHHHHHHHHHHhCCCCC
Confidence            38999999999999999999999999999998632   22 1222222   2221   246665544333332   2469


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEecccc
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCAT  199 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~  199 (267)
                      |++|||+|..                  .....++.++.  .+++|.+++...
T Consensus       109 D~vi~~~g~~------------------~~~~~~~~l~~--~G~~v~~g~~~~  141 (198)
T 1pqw_A          109 DVVLNSLAGE------------------AIQRGVQILAP--GGRFIELGKKDV  141 (198)
T ss_dssp             EEEEECCCTH------------------HHHHHHHTEEE--EEEEEECSCGGG
T ss_pred             eEEEECCchH------------------HHHHHHHHhcc--CCEEEEEcCCCC
Confidence            9999999721                  11233344432  469999887553

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.46  E-value=3.9e-06  Score=62.76  Aligned_cols=73  Identities=14%  Similarity=0.094  Sum_probs=53.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHH-hhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~-~~~~~~D~l  149 (267)
                      ++|+|+|+ |.+|+.+++.|.+.|++|++++++.   +... .+.+.    ..+.++.+|.++.+.+.+. ++  +.|+|
T Consensus         5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~---~~~~-~~~~~----~~~~~~~~d~~~~~~l~~~~~~--~~d~v   73 (140)
T 1lss_A            5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDK---DICK-KASAE----IDALVINGDCTKIKTLEDAGIE--DADMY   73 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH---HHHH-HHHHH----CSSEEEESCTTSHHHHHHTTTT--TCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH---HHHH-HHHHh----cCcEEEEcCCCCHHHHHHcCcc--cCCEE
Confidence            67899986 9999999999999999999998632   2222 22211    1355678999998877654 33  78999


Q ss_pred             EEccc
Q 024488          150 MHFAA  154 (267)
Q Consensus       150 i~~Ag  154 (267)
                      |++.+
T Consensus        74 i~~~~   78 (140)
T 1lss_A           74 IAVTG   78 (140)
T ss_dssp             EECCS
T ss_pred             EEeeC
Confidence            99864

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.39  E-value=9e-06  Score=62.38  Aligned_cols=73  Identities=18%  Similarity=0.170  Sum_probs=53.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHH-hhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~-~~~~~~D~l  149 (267)
                      ++|+|.|+ |.+|+.+++.|.+.|++|+++++++...       +.+.. ......+.+|..+.+.+.++ ++  +.|+|
T Consensus        20 ~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~-------~~~~~-~~g~~~~~~d~~~~~~l~~~~~~--~ad~V   88 (155)
T 2g1u_A           20 KYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAF-------HRLNS-EFSGFTVVGDAAEFETLKECGME--KADMV   88 (155)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGG-------GGSCT-TCCSEEEESCTTSHHHHHTTTGG--GCSEE
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH-------HHHHh-cCCCcEEEecCCCHHHHHHcCcc--cCCEE
Confidence            78999995 9999999999999999999999643221       11110 12355677899888777654 44  68999


Q ss_pred             EEccc
Q 024488          150 MHFAA  154 (267)
Q Consensus       150 i~~Ag  154 (267)
                      |.+.+
T Consensus        89 i~~~~   93 (155)
T 2g1u_A           89 FAFTN   93 (155)
T ss_dssp             EECSS
T ss_pred             EEEeC
Confidence            98875

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.30  E-value=2e-06  Score=74.65  Aligned_cols=117  Identities=16%  Similarity=0.100  Sum_probs=74.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--e-----EEEEecCCCCCcchhhhhhhcCC-CCCceEEEEccCCCHHHHHHHhh
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--R-----VTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFS  142 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~-----V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~  142 (267)
                      ++|.||||+|+||.+++..|+..|.  +     ++++|+... .+.+.-...++.. ...-..-+..  .  ++..+.++
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~-~~~~~g~a~DL~~~~~~~~~~~~~--~--~~~~~~~~   78 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPM-MGVLDGVLMELQDCALPLLKDVIA--T--DKEEIAFK   78 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGG-HHHHHHHHHHHHHTCCTTEEEEEE--E--SCHHHHTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCc-cccchhhHhhhHhhhhcccCCEEE--c--CCcHHHhC
Confidence            6899999999999999999998875  5     888885321 1111111111111 0011111111  1  11233444


Q ss_pred             cCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCC--EEEEEec
Q 024488          143 ENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD--TLIYSST  196 (267)
Q Consensus       143 ~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~iV~vSS  196 (267)
                        +.|+||+.||....  ...+..+.++.|...++.+++.+.+.+..  +|+.+|-
T Consensus        79 --daDvVvitAg~prk--pG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           79 --DLDVAILVGSMPRR--DGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             --TCSEEEECCSCCCC--TTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             --CCCEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence              78999999986532  23455678899999999999999998754  5776665

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.29  E-value=7e-06  Score=70.66  Aligned_cols=115  Identities=17%  Similarity=0.173  Sum_probs=75.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      ++|.|+||+|++|..++..|+..|  .+|+++|+..  .+.....+.+.. ...++.....    .++++++++  +.|+
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~-~~~~l~~~~~----t~d~~~a~~--~aDv   71 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIE-TRATVKGYLG----PEQLPDCLK--GCDV   71 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSS-SSCEEEEEES----GGGHHHHHT--TCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccC-cCceEEEecC----CCCHHHHhC--CCCE
Confidence            378999999999999999999988  7999999743  111111222211 1112222211    133555566  7899


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEec
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSST  196 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vSS  196 (267)
                      ||+.||.....  .....+.+..|...++.+.+.+.+... .+||++|-
T Consensus        72 Vvi~ag~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN  118 (314)
T 1mld_A           72 VVIPAGVPRKP--GMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN  118 (314)
T ss_dssp             EEECCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             EEECCCcCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            99999975322  233456778888899999999888754 47777654

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.27  E-value=2.9e-06  Score=72.90  Aligned_cols=83  Identities=12%  Similarity=0.124  Sum_probs=58.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +|+++|+|+ ||+|++++..|++.|+ +|+++.|+....+++.+..+++... ....+...++.+.+++.+.+.  ..|+
T Consensus       154 gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~-~~~~~~~~~~~~~~~l~~~l~--~aDi  229 (315)
T 3tnl_A          154 GKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSK-TDCKAQLFDIEDHEQLRKEIA--ESVI  229 (315)
T ss_dssp             TSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH-SSCEEEEEETTCHHHHHHHHH--TCSE
T ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhh-cCCceEEeccchHHHHHhhhc--CCCE
Confidence            389999996 8999999999999998 8999997632234444333333211 123334456777777877777  7899


Q ss_pred             EEEccccC
Q 024488          149 VMHFAAVA  156 (267)
Q Consensus       149 li~~Ag~~  156 (267)
                      |||+....
T Consensus       230 IINaTp~G  237 (315)
T 3tnl_A          230 FTNATGVG  237 (315)
T ss_dssp             EEECSSTT
T ss_pred             EEECccCC
Confidence            99987653

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.20  E-value=8.2e-06  Score=62.42  Aligned_cols=76  Identities=21%  Similarity=0.345  Sum_probs=56.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHH-hhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~-~~~~~~D~l  149 (267)
                      ++++|.|+ |.+|+.+++.|.+.|++|+++++++   ++..+.+.+..  ...+.++.+|.++++.++++ ++  +.|.|
T Consensus         4 ~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~---~~~~~~~~~~~--~~~~~~i~gd~~~~~~l~~a~i~--~ad~v   75 (153)
T 1id1_A            4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLP---EDDIKQLEQRL--GDNADVIPGDSNDSSVLKKAGID--RCRAI   75 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC---HHHHHHHHHHH--CTTCEEEESCTTSHHHHHHHTTT--TCSEE
T ss_pred             CcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCC---hHHHHHHHHhh--cCCCeEEEcCCCCHHHHHHcChh--hCCEE
Confidence            67899985 9999999999999999999999632   11111222211  23578899999999988876 55  78999


Q ss_pred             EEccc
Q 024488          150 MHFAA  154 (267)
Q Consensus       150 i~~Ag  154 (267)
                      |.+.+
T Consensus        76 i~~~~   80 (153)
T 1id1_A           76 LALSD   80 (153)
T ss_dssp             EECSS
T ss_pred             EEecC
Confidence            98764

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.20  E-value=5.3e-06  Score=71.77  Aligned_cols=75  Identities=13%  Similarity=0.131  Sum_probs=51.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---CCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~~~  146 (267)
                      +++|+||||+|+||..+++.+...|++|++++++.   ++. +.++++   +..   ..+|.++.+++.+.+.+   +++
T Consensus       146 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~---~~~-~~~~~~---g~~---~~~d~~~~~~~~~~~~~~~~~~~  215 (333)
T 1v3u_A          146 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSD---EKI-AYLKQI---GFD---AAFNYKTVNSLEEALKKASPDGY  215 (333)
T ss_dssp             SCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSH---HHH-HHHHHT---TCS---EEEETTSCSCHHHHHHHHCTTCE
T ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCH---HHH-HHHHhc---CCc---EEEecCCHHHHHHHHHHHhCCCC
Confidence            38999999999999999999999999999998643   222 222333   211   23466652223222221   579


Q ss_pred             CEEEEccc
Q 024488          147 DAVMHFAA  154 (267)
Q Consensus       147 D~li~~Ag  154 (267)
                      |++|||+|
T Consensus       216 d~vi~~~g  223 (333)
T 1v3u_A          216 DCYFDNVG  223 (333)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99999998

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.18  E-value=1.7e-06  Score=74.73  Aligned_cols=75  Identities=9%  Similarity=0.014  Sum_probs=51.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHh---hcCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFF---SENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~---~~~~~  146 (267)
                      +++|+||||+|+||..+++.+...|++|++++++..   + .+.++++   +...   ..|..+.+..+++.   ...++
T Consensus       141 g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~---~-~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~~~~  210 (327)
T 1qor_A          141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQ---K-AQSALKA---GAWQ---VINYREEDLVERLKEITGGKKV  210 (327)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHH---H-HHHHHHH---TCSE---EEETTTSCHHHHHHHHTTTCCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHH---H-HHHHHHc---CCCE---EEECCCccHHHHHHHHhCCCCc
Confidence            389999999999999999999999999999986432   2 2223333   1121   24555544333333   23479


Q ss_pred             CEEEEccc
Q 024488          147 DAVMHFAA  154 (267)
Q Consensus       147 D~li~~Ag  154 (267)
                      |++|+|+|
T Consensus       211 D~vi~~~g  218 (327)
T 1qor_A          211 RVVYDSVG  218 (327)
T ss_dssp             EEEEECSC
T ss_pred             eEEEECCc
Confidence            99999998

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.18  E-value=2.8e-06  Score=74.70  Aligned_cols=71  Identities=20%  Similarity=0.237  Sum_probs=55.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+|+|.|| |++|+.+++.|++ .++|.+.+++.++   +    ++.   ...+..+.+|+.|.+++.++++  +.|+||
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~---~----~~~---~~~~~~~~~d~~d~~~l~~~~~--~~DvVi   82 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNEN---L----EKV---KEFATPLKVDASNFDKLVEVMK--EFELVI   82 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHH---H----HHH---TTTSEEEECCTTCHHHHHHHHT--TCSEEE
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHH---H----HHH---hccCCcEEEecCCHHHHHHHHh--CCCEEE
Confidence            56889998 9999999998865 5899998864322   2    122   1245668899999999999998  789999


Q ss_pred             Ecccc
Q 024488          151 HFAAV  155 (267)
Q Consensus       151 ~~Ag~  155 (267)
                      |+++.
T Consensus        83 ~~~p~   87 (365)
T 3abi_A           83 GALPG   87 (365)
T ss_dssp             ECCCG
T ss_pred             EecCC
Confidence            99864

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.18  E-value=2.2e-06  Score=74.22  Aligned_cols=76  Identities=13%  Similarity=0.032  Sum_probs=51.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHH---HHHHhhcCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKA---VNKFFSENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---v~~~~~~~~~  146 (267)
                      +++|+||||+|+||..+++.+...|++|++++++..   + .+.++++   +...   ..|.++.+.   +.+.....++
T Consensus       146 g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~---~-~~~~~~~---g~~~---~~d~~~~~~~~~i~~~~~~~~~  215 (333)
T 1wly_A          146 GDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEE---K-AETARKL---GCHH---TINYSTQDFAEVVREITGGKGV  215 (333)
T ss_dssp             TCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHH---H-HHHHHHH---TCSE---EEETTTSCHHHHHHHHHTTCCE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHH---H-HHHHHHc---CCCE---EEECCCHHHHHHHHHHhCCCCC
Confidence            389999999999999999999999999999986432   2 2223333   1121   235555433   3333333479


Q ss_pred             CEEEEcccc
Q 024488          147 DAVMHFAAV  155 (267)
Q Consensus       147 D~li~~Ag~  155 (267)
                      |++|+|+|.
T Consensus       216 d~vi~~~g~  224 (333)
T 1wly_A          216 DVVYDSIGK  224 (333)
T ss_dssp             EEEEECSCT
T ss_pred             eEEEECCcH
Confidence            999999984

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.16  E-value=1.7e-06  Score=75.37  Aligned_cols=76  Identities=20%  Similarity=0.282  Sum_probs=51.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---CCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~~~  146 (267)
                      +++|||+||+|+||..+++.+...|++|++++++...   . +.++++   +..   ...|+++.+++.+.+.+   +++
T Consensus       170 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~---~-~~~~~~---g~~---~~~d~~~~~~~~~~~~~~~~~~~  239 (347)
T 2hcy_A          170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGK---E-ELFRSI---GGE---VFIDFTKEKDIVGAVLKATDGGA  239 (347)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTH---H-HHHHHT---TCC---EEEETTTCSCHHHHHHHHHTSCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHH---H-HHHHHc---CCc---eEEecCccHhHHHHHHHHhCCCC
Confidence            3899999999999999999999999999999864332   2 233333   212   12466643333333321   379


Q ss_pred             CEEEEcccc
Q 024488          147 DAVMHFAAV  155 (267)
Q Consensus       147 D~li~~Ag~  155 (267)
                      |++|+++|.
T Consensus       240 D~vi~~~g~  248 (347)
T 2hcy_A          240 HGVINVSVS  248 (347)
T ss_dssp             EEEEECSSC
T ss_pred             CEEEECCCc
Confidence            999999983

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.13  E-value=3.3e-06  Score=73.84  Aligned_cols=76  Identities=11%  Similarity=0.054  Sum_probs=51.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHH---HHHHhhcCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKA---VNKFFSENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---v~~~~~~~~~  146 (267)
                      +++|+||||+|+||..+++.+...|++|++++++..   +. +.++++   +..   ..+|..+.+.   +.+.....++
T Consensus       163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~---~~-~~~~~~---g~~---~~~~~~~~~~~~~~~~~~~~~~~  232 (354)
T 2j8z_A          163 GDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQK---KL-QMAEKL---GAA---AGFNYKKEDFSEATLKFTKGAGV  232 (354)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH---HH-HHHHHH---TCS---EEEETTTSCHHHHHHHHTTTSCE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHH---HH-HHHHHc---CCc---EEEecCChHHHHHHHHHhcCCCc
Confidence            389999999999999999999999999999986432   22 222333   112   1245554433   3333332479


Q ss_pred             CEEEEcccc
Q 024488          147 DAVMHFAAV  155 (267)
Q Consensus       147 D~li~~Ag~  155 (267)
                      |++|+|+|.
T Consensus       233 d~vi~~~G~  241 (354)
T 2j8z_A          233 NLILDCIGG  241 (354)
T ss_dssp             EEEEESSCG
T ss_pred             eEEEECCCc
Confidence            999999984

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.11  E-value=1.5e-05  Score=69.31  Aligned_cols=116  Identities=14%  Similarity=0.120  Sum_probs=71.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      +++|.|+|++|++|..++..++..|  .+|+++|......+.....+....-...++.+ .   +|   ..+.++  +.|
T Consensus         8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t---~d---~~~al~--dAD   78 (343)
T 3fi9_A            8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T---SD---IKEALT--DAK   78 (343)
T ss_dssp             SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E---SC---HHHHHT--TEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c---CC---HHHHhC--CCC
Confidence            4789999999999999999999998  48999985322111111112222111112221 1   12   334454  789


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCE--EEEEec
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT--LIYSST  196 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--iV~vSS  196 (267)
                      ++|..||...  ....+..+.+..|....+.+.+.+.+....-  |+.+|-
T Consensus        79 vVvitaG~p~--kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsN  127 (343)
T 3fi9_A           79 YIVSSGGAPR--KEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFN  127 (343)
T ss_dssp             EEEECCC---------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred             EEEEccCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecC
Confidence            9999999743  2234556778889999999999998876433  455553

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.09  E-value=4.7e-06  Score=72.79  Aligned_cols=75  Identities=17%  Similarity=0.228  Sum_probs=51.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHH---hhcCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF---FSENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~---~~~~~~  146 (267)
                      +++|+|+||+|+||..+++.+...|++|++++++..   +. +.++++   +..   ..+|..+.+..+++   ....++
T Consensus       171 g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~---~~-~~~~~~---ga~---~~~d~~~~~~~~~~~~~~~~~~~  240 (351)
T 1yb5_A          171 GESVLVHGASGGVGLAACQIARAYGLKILGTAGTEE---GQ-KIVLQN---GAH---EVFNHREVNYIDKIKKYVGEKGI  240 (351)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHH---HH-HHHHHT---TCS---EEEETTSTTHHHHHHHHHCTTCE
T ss_pred             cCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChh---HH-HHHHHc---CCC---EEEeCCCchHHHHHHHHcCCCCc
Confidence            389999999999999999999999999999986432   22 223333   211   12455554433333   322479


Q ss_pred             CEEEEccc
Q 024488          147 DAVMHFAA  154 (267)
Q Consensus       147 D~li~~Ag  154 (267)
                      |++|+|+|
T Consensus       241 D~vi~~~G  248 (351)
T 1yb5_A          241 DIIIEMLA  248 (351)
T ss_dssp             EEEEESCH
T ss_pred             EEEEECCC
Confidence            99999998

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.07  E-value=8.1e-06  Score=71.87  Aligned_cols=104  Identities=22%  Similarity=0.236  Sum_probs=66.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +++|+|+|+ |+||+.+++.|...|++|++++++..   ++.+ +.+..  +..   +.+|..+.+++++++.  +.|+|
T Consensus       166 ~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~---~~~~-~~~~~--g~~---~~~~~~~~~~l~~~~~--~~DvV  233 (369)
T 2eez_A          166 PASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHK---RLQY-LDDVF--GGR---VITLTATEANIKKSVQ--HADLL  233 (369)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHH---HHHH-HHHHT--TTS---EEEEECCHHHHHHHHH--HCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHH---HHHH-HHHhc--Cce---EEEecCCHHHHHHHHh--CCCEE
Confidence            389999998 99999999999999999999996432   2222 22211  112   4567788888888887  78999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccc
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA  198 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~  198 (267)
                      |++++......    +       ...+...++.|+  ..+.||++|+..
T Consensus       234 i~~~g~~~~~~----~-------~li~~~~l~~mk--~gg~iV~v~~~~  269 (369)
T 2eez_A          234 IGAVLVPGAKA----P-------KLVTRDMLSLMK--EGAVIVDVAVDQ  269 (369)
T ss_dssp             EECCC------------------CCSCHHHHTTSC--TTCEEEECC---
T ss_pred             EECCCCCcccc----c-------hhHHHHHHHhhc--CCCEEEEEecCC
Confidence            99998642100    0       001233445553  357899999854

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.04  E-value=1e-05  Score=70.73  Aligned_cols=73  Identities=16%  Similarity=0.069  Sum_probs=49.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhh-cCCCCCceEEEEccCCCHH---HHHHHhhcCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQE-LFPEPGRLQFIYADLGDAK---AVNKFFSENA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~---~v~~~~~~~~  145 (267)
                      ++|+||||+|+||..+++.+...|+ +|++++++.   ++. +.+++ +   +..   ..+|..+.+   .+.+... ++
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~---~~~-~~~~~~~---g~~---~~~d~~~~~~~~~~~~~~~-~~  230 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTH---EKC-ILLTSEL---GFD---AAINYKKDNVAEQLRESCP-AG  230 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCH---HHH-HHHHHTS---CCS---EEEETTTSCHHHHHHHHCT-TC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCH---HHH-HHHHHHc---CCc---eEEecCchHHHHHHHHhcC-CC
Confidence            7999999999999999999999999 999998532   222 22222 3   211   124555533   2333332 37


Q ss_pred             CCEEEEccc
Q 024488          146 FDAVMHFAA  154 (267)
Q Consensus       146 ~D~li~~Ag  154 (267)
                      +|++|+|+|
T Consensus       231 ~d~vi~~~G  239 (357)
T 2zb4_A          231 VDVYFDNVG  239 (357)
T ss_dssp             EEEEEESCC
T ss_pred             CCEEEECCC
Confidence            999999998

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.03  E-value=1.2e-05  Score=69.66  Aligned_cols=101  Identities=18%  Similarity=0.151  Sum_probs=62.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhh-hhcCCCCCceEEEEccCCCHHHHHHHhh--cCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVL-QELFPEPGRLQFIYADLGDAKAVNKFFS--ENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~v~~~~~--~~~~  146 (267)
                      +++|+|+||+|+||..+++.+...|++|++++++..   +. +.+ +++   +...   ..|..+.+..+.+.+  .+++
T Consensus       150 g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~---~~-~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~~~  219 (336)
T 4b7c_A          150 GETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAE---KC-RFLVEEL---GFDG---AIDYKNEDLAAGLKRECPKGI  219 (336)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH---HH-HHHHHTT---CCSE---EEETTTSCHHHHHHHHCTTCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH---HH-HHHHHHc---CCCE---EEECCCHHHHHHHHHhcCCCc
Confidence            389999999999999999999999999999986432   22 222 333   2211   234444333332222  2479


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccc
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATY  200 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~  200 (267)
                      |++|+|+|..                  .....++.++  ..+++|.++....+
T Consensus       220 d~vi~~~g~~------------------~~~~~~~~l~--~~G~iv~~G~~~~~  253 (336)
T 4b7c_A          220 DVFFDNVGGE------------------ILDTVLTRIA--FKARIVLCGAISQY  253 (336)
T ss_dssp             EEEEESSCHH------------------HHHHHHTTEE--EEEEEEECCCGGGG
T ss_pred             eEEEECCCcc------------------hHHHHHHHHh--hCCEEEEEeecccc
Confidence            9999999831                  1122233332  24689998876644

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.01  E-value=3.4e-05  Score=60.68  Aligned_cols=72  Identities=18%  Similarity=0.111  Sum_probs=54.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHH--hhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF--FSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~--~~~~~~D  147 (267)
                      ++|+|.| .|.+|..+++.|.+. |++|+++++++   +.. +.+.+.     .+..+.+|.++.+.+.++  ++  +.|
T Consensus        40 ~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~---~~~-~~~~~~-----g~~~~~gd~~~~~~l~~~~~~~--~ad  107 (183)
T 3c85_A           40 AQVLILG-MGRIGTGAYDELRARYGKISLGIEIRE---EAA-QQHRSE-----GRNVISGDATDPDFWERILDTG--HVK  107 (183)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCH---HHH-HHHHHT-----TCCEEECCTTCHHHHHTBCSCC--CCC
T ss_pred             CcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCH---HHH-HHHHHC-----CCCEEEcCCCCHHHHHhccCCC--CCC
Confidence            6788998 699999999999999 99999999643   222 222221     355678999998887766  44  789


Q ss_pred             EEEEccc
Q 024488          148 AVMHFAA  154 (267)
Q Consensus       148 ~li~~Ag  154 (267)
                      +||.+.+
T Consensus       108 ~vi~~~~  114 (183)
T 3c85_A          108 LVLLAMP  114 (183)
T ss_dssp             EEEECCS
T ss_pred             EEEEeCC
Confidence            9998764

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.01  E-value=4.7e-06  Score=70.19  Aligned_cols=74  Identities=16%  Similarity=0.209  Sum_probs=48.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+++|+|+ ||+|++++..|++.|++|++++|+.   +++.+..+++...+ .+  ...|+   +++.   + +++|+||
T Consensus       120 k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~---~~~~~la~~~~~~~-~~--~~~~~---~~~~---~-~~~DivV  185 (271)
T 1nyt_A          120 LRILLIGA-GGASRGVLLPLLSLDCAVTITNRTV---SRAEELAKLFAHTG-SI--QALSM---DELE---G-HEFDLII  185 (271)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSH---HHHHHHHHHTGGGS-SE--EECCS---GGGT---T-CCCSEEE
T ss_pred             CEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCH---HHHHHHHHHhhccC-Ce--eEecH---HHhc---c-CCCCEEE
Confidence            89999997 8999999999999999999998643   23323222221111 22  12333   2222   1 4799999


Q ss_pred             EccccCCc
Q 024488          151 HFAAVAYV  158 (267)
Q Consensus       151 ~~Ag~~~~  158 (267)
                      |+++....
T Consensus       186 n~t~~~~~  193 (271)
T 1nyt_A          186 NATSSGIS  193 (271)
T ss_dssp             ECCSCGGG
T ss_pred             ECCCCCCC
Confidence            99987543

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.97  E-value=1.6e-05  Score=69.06  Aligned_cols=76  Identities=18%  Similarity=0.113  Sum_probs=51.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~  146 (267)
                      +++|+|+||+|+||..+++.+...|++|++++++..+.    +.++++   +... .  .|..+.   +.+.++....++
T Consensus       145 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~----~~~~~l---ga~~-~--~~~~~~~~~~~~~~~~~~~g~  214 (340)
T 3gms_A          145 NDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHT----EELLRL---GAAY-V--IDTSTAPLYETVMELTNGIGA  214 (340)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTH----HHHHHH---TCSE-E--EETTTSCHHHHHHHHTTTSCE
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHhC---CCcE-E--EeCCcccHHHHHHHHhCCCCC
Confidence            38999999999999999998888999999999654433    223333   2222 2  244333   334444333479


Q ss_pred             CEEEEcccc
Q 024488          147 DAVMHFAAV  155 (267)
Q Consensus       147 D~li~~Ag~  155 (267)
                      |++|+++|.
T Consensus       215 Dvvid~~g~  223 (340)
T 3gms_A          215 DAAIDSIGG  223 (340)
T ss_dssp             EEEEESSCH
T ss_pred             cEEEECCCC
Confidence            999999984

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.96  E-value=1.1e-05  Score=69.85  Aligned_cols=76  Identities=18%  Similarity=0.175  Sum_probs=51.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~  146 (267)
                      +++|+|+||+|+||...++.+...|++|++++++..   + .+.++++   +... .  .|..+.   +.+.++....++
T Consensus       149 g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~---~-~~~~~~~---ga~~-~--~~~~~~~~~~~~~~~~~~~g~  218 (334)
T 3qwb_A          149 GDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDE---K-LKIAKEY---GAEY-L--INASKEDILRQVLKFTNGKGV  218 (334)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHH---H-HHHHHHT---TCSE-E--EETTTSCHHHHHHHHTTTSCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH---H-HHHHHHc---CCcE-E--EeCCCchHHHHHHHHhCCCCc
Confidence            389999999999999999999999999999986332   2 2233333   2222 2  233333   334444433579


Q ss_pred             CEEEEcccc
Q 024488          147 DAVMHFAAV  155 (267)
Q Consensus       147 D~li~~Ag~  155 (267)
                      |++|+++|.
T Consensus       219 D~vid~~g~  227 (334)
T 3qwb_A          219 DASFDSVGK  227 (334)
T ss_dssp             EEEEECCGG
T ss_pred             eEEEECCCh
Confidence            999999984

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.96  E-value=1e-05  Score=70.41  Aligned_cols=76  Identities=16%  Similarity=0.186  Sum_probs=51.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHH---HHHHhhcCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKA---VNKFFSENA  145 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---v~~~~~~~~  145 (267)
                      +++|+||||+|+||..+++.+... |++|++++++...    .+.++++   +...   ..|..+.+.   +.++...++
T Consensus       171 g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~----~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~~~  240 (347)
T 1jvb_A          171 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEA----VEAAKRA---GADY---VINASMQDPLAEIRRITESKG  240 (347)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHH----HHHHHHH---TCSE---EEETTTSCHHHHHHHHTTTSC
T ss_pred             CCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHH----HHHHHHh---CCCE---EecCCCccHHHHHHHHhcCCC
Confidence            389999999999999999999998 9999999864322    2223333   2121   234444333   444433147


Q ss_pred             CCEEEEcccc
Q 024488          146 FDAVMHFAAV  155 (267)
Q Consensus       146 ~D~li~~Ag~  155 (267)
                      +|++|+++|.
T Consensus       241 ~d~vi~~~g~  250 (347)
T 1jvb_A          241 VDAVIDLNNS  250 (347)
T ss_dssp             EEEEEESCCC
T ss_pred             ceEEEECCCC
Confidence            9999999984

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.93  E-value=3.5e-06  Score=71.59  Aligned_cols=77  Identities=12%  Similarity=0.192  Sum_probs=47.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+++|||++ |+|++++..|++.| +|++++|+..+.+++.+.+.....  ... .+.+|+.+.   .+.+  +++|+||
T Consensus       129 k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~--~~~-~~~~d~~~~---~~~~--~~~DilV  198 (287)
T 1nvt_A          129 KNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLN--KKF-GEEVKFSGL---DVDL--DGVDIII  198 (287)
T ss_dssp             CEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHT--CCH-HHHEEEECT---TCCC--TTCCEEE
T ss_pred             CEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcc--ccc-ceeEEEeeH---HHhh--CCCCEEE
Confidence            899999986 99999999999999 999998643222222222211100  000 112344331   1222  4799999


Q ss_pred             EccccCC
Q 024488          151 HFAAVAY  157 (267)
Q Consensus       151 ~~Ag~~~  157 (267)
                      ||++...
T Consensus       199 n~ag~~~  205 (287)
T 1nvt_A          199 NATPIGM  205 (287)
T ss_dssp             ECSCTTC
T ss_pred             ECCCCCC
Confidence            9999754

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.92  E-value=2.7e-05  Score=63.14  Aligned_cols=73  Identities=18%  Similarity=0.194  Sum_probs=54.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHH-hhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~-~~~~~~D~l  149 (267)
                      |+|+|.|+ |.+|+++++.|.+.|++|+++++++   +...+..++     .+..++.+|.++.+.++++ ++  +.|++
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~---~~~~~l~~~-----~~~~~i~gd~~~~~~l~~a~i~--~ad~v   69 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDR---ELCEEFAKK-----LKATIIHGDGSHKEILRDAEVS--KNDVV   69 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCH---HHHHHHHHH-----SSSEEEESCTTSHHHHHHHTCC--TTCEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH---HHHHHHHHH-----cCCeEEEcCCCCHHHHHhcCcc--cCCEE
Confidence            36899995 9999999999999999999999533   222221111     1467899999999988876 44  78999


Q ss_pred             EEccc
Q 024488          150 MHFAA  154 (267)
Q Consensus       150 i~~Ag  154 (267)
                      |-+.+
T Consensus        70 i~~~~   74 (218)
T 3l4b_C           70 VILTP   74 (218)
T ss_dssp             EECCS
T ss_pred             EEecC
Confidence            87653

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.91  E-value=1.2e-05  Score=69.28  Aligned_cols=76  Identities=14%  Similarity=0.030  Sum_probs=51.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~  146 (267)
                      +++|+|+||+|+||...++.+...|++|++++++..+    .+.++++   +.. ..  .|..+.   +.+.++....++
T Consensus       141 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~----~~~~~~~---Ga~-~~--~~~~~~~~~~~~~~~~~~~g~  210 (325)
T 3jyn_A          141 GEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEK----AAHAKAL---GAW-ET--IDYSHEDVAKRVLELTDGKKC  210 (325)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHH----HHHHHHH---TCS-EE--EETTTSCHHHHHHHHTTTCCE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHc---CCC-EE--EeCCCccHHHHHHHHhCCCCc
Confidence            3899999999999999999999999999999864322    2233333   211 12  344333   334444333579


Q ss_pred             CEEEEcccc
Q 024488          147 DAVMHFAAV  155 (267)
Q Consensus       147 D~li~~Ag~  155 (267)
                      |++|+++|.
T Consensus       211 Dvvid~~g~  219 (325)
T 3jyn_A          211 PVVYDGVGQ  219 (325)
T ss_dssp             EEEEESSCG
T ss_pred             eEEEECCCh
Confidence            999999984

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.91  E-value=1.6e-05  Score=69.45  Aligned_cols=75  Identities=13%  Similarity=0.113  Sum_probs=51.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~  146 (267)
                      +++|+|+||+|+||..+++.+...|++|++++++..+    .+.++++   +... .  .|..+.   +.+.++. ..++
T Consensus       168 g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~----~~~~~~l---Ga~~-~--~~~~~~~~~~~~~~~~-~~g~  236 (353)
T 4dup_A          168 GESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGK----CEACERL---GAKR-G--INYRSEDFAAVIKAET-GQGV  236 (353)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH----HHHHHHH---TCSE-E--EETTTSCHHHHHHHHH-SSCE
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHhc---CCCE-E--EeCCchHHHHHHHHHh-CCCc
Confidence            3899999999999999999999999999999864322    2233333   2121 2  233332   3344433 3579


Q ss_pred             CEEEEcccc
Q 024488          147 DAVMHFAAV  155 (267)
Q Consensus       147 D~li~~Ag~  155 (267)
                      |++|+++|.
T Consensus       237 Dvvid~~g~  245 (353)
T 4dup_A          237 DIILDMIGA  245 (353)
T ss_dssp             EEEEESCCG
T ss_pred             eEEEECCCH
Confidence            999999984

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.90  E-value=3.1e-05  Score=67.22  Aligned_cols=74  Identities=14%  Similarity=0.103  Sum_probs=49.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhh-hcCCCCCceEEEEccCCCH----HHHHHHhhcC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQ-ELFPEPGRLQFIYADLGDA----KAVNKFFSEN  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~----~~v~~~~~~~  144 (267)
                      +++|+|+||+|+||..+++.+...|++|++++++..   +. +.++ ++   +...   ..|..+.    +.+.++.. +
T Consensus       156 g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~---~~-~~~~~~~---g~~~---~~d~~~~~~~~~~~~~~~~-~  224 (345)
T 2j3h_A          156 GETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKE---KV-DLLKTKF---GFDD---AFNYKEESDLTAALKRCFP-N  224 (345)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH---HH-HHHHHTS---CCSE---EEETTSCSCSHHHHHHHCT-T
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH---HH-HHHHHHc---CCce---EEecCCHHHHHHHHHHHhC-C
Confidence            389999999999999999999999999999986432   22 2222 23   2121   2355443    23333322 4


Q ss_pred             CCCEEEEccc
Q 024488          145 AFDAVMHFAA  154 (267)
Q Consensus       145 ~~D~li~~Ag  154 (267)
                      ++|++|+++|
T Consensus       225 ~~d~vi~~~g  234 (345)
T 2j3h_A          225 GIDIYFENVG  234 (345)
T ss_dssp             CEEEEEESSC
T ss_pred             CCcEEEECCC
Confidence            7999999997

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.90  E-value=1.7e-05  Score=68.89  Aligned_cols=75  Identities=13%  Similarity=0.089  Sum_probs=51.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHH---HHHHHhhcCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---AVNKFFSENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~v~~~~~~~~~  146 (267)
                      +++|+|+||+|+||..+++.+...|++|++++++..+    .+.++++   +.. .  .+|..+.+   .+.++....++
T Consensus       167 g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~----~~~~~~~---ga~-~--~~d~~~~~~~~~~~~~~~~~~~  236 (343)
T 2eih_A          167 GDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDK----LRRAKAL---GAD-E--TVNYTHPDWPKEVRRLTGGKGA  236 (343)
T ss_dssp             TCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHH----HHHHHHH---TCS-E--EEETTSTTHHHHHHHHTTTTCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHhc---CCC-E--EEcCCcccHHHHHHHHhCCCCc
Confidence            3899999999999999999999999999999864322    2223333   111 1  24655533   33333322479


Q ss_pred             CEEEEccc
Q 024488          147 DAVMHFAA  154 (267)
Q Consensus       147 D~li~~Ag  154 (267)
                      |++|+++|
T Consensus       237 d~vi~~~g  244 (343)
T 2eih_A          237 DKVVDHTG  244 (343)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99999998

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.89  E-value=3.8e-05  Score=57.84  Aligned_cols=72  Identities=14%  Similarity=0.246  Sum_probs=54.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHH-hhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~-~~~~~~D~l  149 (267)
                      ++|+|.|. |.+|+.+++.|.+.|++|+++++++   +.. +.+.+     ..+.++.+|.++++.++++ ++  +.|++
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~---~~~-~~~~~-----~g~~~i~gd~~~~~~l~~a~i~--~ad~v   75 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSR---TRV-DELRE-----RGVRAVLGNAANEEIMQLAHLE--CAKWL   75 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCH---HHH-HHHHH-----TTCEEEESCTTSHHHHHHTTGG--GCSEE
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCH---HHH-HHHHH-----cCCCEEECCCCCHHHHHhcCcc--cCCEE
Confidence            68999995 9999999999999999999999643   222 22222     2567789999999888765 23  67999


Q ss_pred             EEccc
Q 024488          150 MHFAA  154 (267)
Q Consensus       150 i~~Ag  154 (267)
                      |.+.+
T Consensus        76 i~~~~   80 (140)
T 3fwz_A           76 ILTIP   80 (140)
T ss_dssp             EECCS
T ss_pred             EEECC
Confidence            87654

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.86  E-value=3.7e-05  Score=66.79  Aligned_cols=77  Identities=22%  Similarity=0.151  Sum_probs=51.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH-HHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~D~  148 (267)
                      +++|||+||+|+||...++.+...|++|++++++..+.    +.++++   +.. ..+..+ .+. +.+.++....++|+
T Consensus       160 g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~----~~~~~~---ga~-~v~~~~-~~~~~~v~~~~~~~g~Dv  230 (342)
T 4eye_A          160 GETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAAT----EFVKSV---GAD-IVLPLE-EGWAKAVREATGGAGVDM  230 (342)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGH----HHHHHH---TCS-EEEESS-TTHHHHHHHHTTTSCEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHhc---CCc-EEecCc-hhHHHHHHHHhCCCCceE
Confidence            38999999999999999999999999999999644322    233333   111 223333 222 23334333347999


Q ss_pred             EEEcccc
Q 024488          149 VMHFAAV  155 (267)
Q Consensus       149 li~~Ag~  155 (267)
                      +|+++|.
T Consensus       231 vid~~g~  237 (342)
T 4eye_A          231 VVDPIGG  237 (342)
T ss_dssp             EEESCC-
T ss_pred             EEECCch
Confidence            9999984

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.82  E-value=3.2e-05  Score=66.37  Aligned_cols=83  Identities=12%  Similarity=0.109  Sum_probs=54.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +|+++|+|+ ||+|++++..|++.|+ +|+++.|+....+++.+..+++... ........++.+.+.+.+.+.  ..|+
T Consensus       148 gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~-~~~~v~~~~~~~l~~~~~~l~--~~Di  223 (312)
T 3t4e_A          148 GKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNEN-TDCVVTVTDLADQHAFTEALA--SADI  223 (312)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHH-SSCEEEEEETTCHHHHHHHHH--HCSE
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhc-cCcceEEechHhhhhhHhhcc--CceE
Confidence            389999996 9999999999999998 8999997632233333333332111 122333446666544455555  5799


Q ss_pred             EEEccccC
Q 024488          149 VMHFAAVA  156 (267)
Q Consensus       149 li~~Ag~~  156 (267)
                      |||+-...
T Consensus       224 IINaTp~G  231 (312)
T 3t4e_A          224 LTNGTKVG  231 (312)
T ss_dssp             EEECSSTT
T ss_pred             EEECCcCC
Confidence            99986654

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.82  E-value=0.00015  Score=62.57  Aligned_cols=115  Identities=17%  Similarity=0.210  Sum_probs=73.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCC-CCceEEEEccCCCHHHHHHHhhcCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (267)
                      +++|.|+|+ |.+|..++..|+..|.  +|+++|+.....+.....+...... +..+.....|   .    +.++  +.
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~----~a~~--~a   74 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y----EDCK--DA   74 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G----GGGT--TC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H----HHhC--CC
Confidence            378999995 9999999999999987  8999986322211111112222111 1233333322   2    2344  78


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEec
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSST  196 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vSS  196 (267)
                      |++|..||...  .......+.+..|....+.+.+.+.+... ..|+.+|-
T Consensus        75 DvVvi~ag~p~--kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN  123 (326)
T 3pqe_A           75 DIVCICAGANQ--KPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN  123 (326)
T ss_dssp             SEEEECCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             CEEEEecccCC--CCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            99999999643  22345567788888888888898887754 35555553

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.80  E-value=5.6e-05  Score=65.22  Aligned_cols=114  Identities=16%  Similarity=0.190  Sum_probs=61.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      +++|.|+|+ |.+|..++..|+..|.  +|+++|+.....+.....+.........+.....   +.    +.++  +.|
T Consensus         9 ~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~---~~----~a~~--~aD   78 (326)
T 3vku_A            9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSA---EY----SDAK--DAD   78 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEEC---CG----GGGT--TCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEEC---cH----HHhc--CCC
Confidence            478999996 9999999999999887  8999986322112111122221111123333322   22    2344  789


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEe
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSS  195 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vS  195 (267)
                      ++|..||....  ...+..+.+..|....+.+.+.+.+... ..++.+|
T Consensus        79 iVvi~ag~~~k--pG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           79 LVVITAGAPQK--PGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             EEEECCCCC------------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             EEEECCCCCCC--CCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            99999997432  2234456677787778888888887654 3455554

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.77  E-value=1.4e-05  Score=73.53  Aligned_cols=72  Identities=17%  Similarity=0.272  Sum_probs=45.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+++|||| ||+|++++.+|++.|++|++++|+.   +++.+..+++   +..+  +  ++.|   ++++ ....+|+||
T Consensus       365 k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~---~~a~~la~~~---~~~~--~--~~~d---l~~~-~~~~~DilV  429 (523)
T 2o7s_A          365 KTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTY---ERALELAEAI---GGKA--L--SLTD---LDNY-HPEDGMVLA  429 (523)
T ss_dssp             -CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSH---HHHHHHHHHT---TC-C--E--ETTT---TTTC---CCSEEEE
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHc---CCce--e--eHHH---hhhc-cccCceEEE
Confidence            89999998 6999999999999999999998643   3333333333   1122  1  1222   1111 112589999


Q ss_pred             EccccCC
Q 024488          151 HFAAVAY  157 (267)
Q Consensus       151 ~~Ag~~~  157 (267)
                      ||+|+..
T Consensus       430 N~agvg~  436 (523)
T 2o7s_A          430 NTTSMGM  436 (523)
T ss_dssp             ECSSTTC
T ss_pred             ECCCCCC
Confidence            9999743

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.76  E-value=4.7e-05  Score=64.45  Aligned_cols=78  Identities=18%  Similarity=0.299  Sum_probs=51.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +|+++|+|+ ||+|++++..|++.|+ +|++++|+..+.+++.+.+...   ...+.+...+..+   +.+.+.  ..|+
T Consensus       127 ~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~---~~~~~i~~~~~~~---l~~~l~--~~Di  197 (283)
T 3jyo_A          127 LDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA---VGREAVVGVDARG---IEDVIA--AADG  197 (283)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH---HTSCCEEEECSTT---HHHHHH--HSSE
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhh---cCCceEEEcCHHH---HHHHHh--cCCE
Confidence            389999997 8999999999999998 7999986543333333333221   1122333444434   344555  5799


Q ss_pred             EEEccccC
Q 024488          149 VMHFAAVA  156 (267)
Q Consensus       149 li~~Ag~~  156 (267)
                      |||+....
T Consensus       198 VInaTp~G  205 (283)
T 3jyo_A          198 VVNATPMG  205 (283)
T ss_dssp             EEECSSTT
T ss_pred             EEECCCCC
Confidence            99987543

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.74  E-value=4.1e-05  Score=66.62  Aligned_cols=98  Identities=7%  Similarity=0.073  Sum_probs=62.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHH---HHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---AVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~v~~~~~~~~~D  147 (267)
                      ++|+|+||+|+||...++.+...|++|++++++..+.    +.++++   +.. ..  .|..+.+   .+.++....++|
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~----~~~~~~---Ga~-~~--~~~~~~~~~~~v~~~~~~~g~D  235 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQI----ALLKDI---GAA-HV--LNEKAPDFEATLREVMKAEQPR  235 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGH----HHHHHH---TCS-EE--EETTSTTHHHHHHHHHHHHCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHc---CCC-EE--EECCcHHHHHHHHHHhcCCCCc
Confidence            7999999999999999999888999999998644322    223333   211 12  2333322   333333324799


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccc
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA  198 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~  198 (267)
                      ++|+++|..                  .....++.++  ..+++|.+++..
T Consensus       236 ~vid~~g~~------------------~~~~~~~~l~--~~G~iv~~G~~~  266 (349)
T 3pi7_A          236 IFLDAVTGP------------------LASAIFNAMP--KRARWIIYGRLD  266 (349)
T ss_dssp             EEEESSCHH------------------HHHHHHHHSC--TTCEEEECCCSC
T ss_pred             EEEECCCCh------------------hHHHHHhhhc--CCCEEEEEeccC
Confidence            999999831                  1122344442  357999987643

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.71  E-value=0.00016  Score=62.53  Aligned_cols=115  Identities=15%  Similarity=0.110  Sum_probs=72.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      +++|.|+|+ |.+|..++..|+..|.  +|+++|+.....+.....+............+..  .|++    .++  +.|
T Consensus        19 ~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~----~~~--~aD   89 (331)
T 4aj2_A           19 QNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYS----VTA--NSK   89 (331)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGG----GGT--TEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHH----HhC--CCC
Confidence            478999997 9999999999999987  8999985322112211222222111111122222  2332    233  789


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEe
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSS  195 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vS  195 (267)
                      ++|..||....  ...+..+.+..|....+.+.+.+.+... ..++.+|
T Consensus        90 iVvi~aG~~~k--pG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt  136 (331)
T 4aj2_A           90 LVIITAGARQQ--EGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS  136 (331)
T ss_dssp             EEEECCSCCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEEccCCCCC--CCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99999997532  2345667888888888888888877653 3555554

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.70  E-value=0.00036  Score=59.99  Aligned_cols=112  Identities=16%  Similarity=0.233  Sum_probs=67.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      ++|.|+|+ |.+|..++..|+..|.  +|+++|......+.....+.+.......+.+. .  .+.    +.++  +.|+
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~~----~a~~--~aDv   77 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GDY----SDVK--DCDV   77 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG----GGGT--TCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CCH----HHhC--CCCE
Confidence            67889997 9999999999999987  99999975433332222222221111223222 1  222    2344  7899


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEE
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYS  194 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~v  194 (267)
                      +|..+|....  ......+....|....+.+.+.+.+... ..||++
T Consensus        78 Vii~~g~p~k--~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~  122 (318)
T 1y6j_A           78 IVVTAGANRK--PGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV  122 (318)
T ss_dssp             EEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred             EEEcCCCCCC--CCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe
Confidence            9999987432  2234456677888888888888887653 344444

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.69  E-value=0.00034  Score=58.03  Aligned_cols=78  Identities=19%  Similarity=0.213  Sum_probs=52.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCC-------------------CcchhhhhhhcCCCCCceEEEEcc
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRG-------------------NIGAVKVLQELFPEPGRLQFIYAD  130 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~D  130 (267)
                      ++|+|.| .||+|.++++.|++.|. +++++++..-.                   .+.+.+.+.++. ...++..+..+
T Consensus        32 ~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n-p~~~v~~~~~~  109 (249)
T 1jw9_B           32 SRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN-PHIAITPVNAL  109 (249)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC-TTSEEEEECSC
T ss_pred             CeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHC-CCcEEEEEecc
Confidence            7899999 58999999999999997 89999875411                   111112222221 12245566666


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEcc
Q 024488          131 LGDAKAVNKFFSENAFDAVMHFA  153 (267)
Q Consensus       131 l~d~~~v~~~~~~~~~D~li~~A  153 (267)
                      ++ .+.+.++++  +.|+||.+.
T Consensus       110 ~~-~~~~~~~~~--~~DvVi~~~  129 (249)
T 1jw9_B          110 LD-DAELAALIA--EHDLVLDCT  129 (249)
T ss_dssp             CC-HHHHHHHHH--TSSEEEECC
T ss_pred             CC-HhHHHHHHh--CCCEEEEeC
Confidence            65 356667777  789999875

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.69  E-value=8.8e-05  Score=63.24  Aligned_cols=74  Identities=15%  Similarity=0.196  Sum_probs=50.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      ++|+|+|+ |++|+.++..|++.|+ +|++++|+.   +++.+..+++.....       ++.+.+++.+.+.  +.|+|
T Consensus       142 ~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~---~ka~~la~~~~~~~~-------~~~~~~~~~~~~~--~aDiv  208 (297)
T 2egg_A          142 KRILVIGA-GGGARGIYFSLLSTAAERIDMANRTV---EKAERLVREGDERRS-------AYFSLAEAETRLA--EYDII  208 (297)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSH---HHHHHHHHHSCSSSC-------CEECHHHHHHTGG--GCSEE
T ss_pred             CEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCH---HHHHHHHHHhhhccC-------ceeeHHHHHhhhc--cCCEE
Confidence            89999996 8999999999999998 999988643   333333333311100       1223355666665  78999


Q ss_pred             EEccccCC
Q 024488          150 MHFAAVAY  157 (267)
Q Consensus       150 i~~Ag~~~  157 (267)
                      ||+.+...
T Consensus       209 In~t~~~~  216 (297)
T 2egg_A          209 INTTSVGM  216 (297)
T ss_dssp             EECSCTTC
T ss_pred             EECCCCCC
Confidence            99998654

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.68  E-value=5.4e-05  Score=66.34  Aligned_cols=74  Identities=22%  Similarity=0.278  Sum_probs=51.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      ++|+|+|+ |++|+.+++.+...|++|++++|+..+.+.    +++...  ..+..   +..+.+++.+.+.  +.|+||
T Consensus       168 ~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~----~~~~~~--~~~~~---~~~~~~~~~~~~~--~~DvVI  235 (361)
T 1pjc_A          168 GKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSY----LETLFG--SRVEL---LYSNSAEIETAVA--EADLLI  235 (361)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHHHHG--GGSEE---EECCHHHHHHHHH--TCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHH----HHHhhC--ceeEe---eeCCHHHHHHHHc--CCCEEE
Confidence            89999998 999999999999999999999964422222    222111  11211   2234566666666  789999


Q ss_pred             EccccC
Q 024488          151 HFAAVA  156 (267)
Q Consensus       151 ~~Ag~~  156 (267)
                      |+++..
T Consensus       236 ~~~~~~  241 (361)
T 1pjc_A          236 GAVLVP  241 (361)
T ss_dssp             ECCCCT
T ss_pred             ECCCcC
Confidence            999864

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.64  E-value=0.00033  Score=59.97  Aligned_cols=112  Identities=11%  Similarity=0.103  Sum_probs=66.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCC----CCceEEEEccCCCHHHHHHHhhcCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPE----PGRLQFIYADLGDAKAVNKFFSENA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (267)
                      ++|.|+|| |.+|..++..|+..|+ +|+++|++..   .+.....++...    .....+...  +|.    +.++  +
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~---~~~g~~~dl~~~~~~~~~~~~i~~t--~d~----~a~~--~   70 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEG---VPQGKALDLYEASPIEGFDVRVTGT--NNY----ADTA--N   70 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSS---HHHHHHHHHHTTHHHHTCCCCEEEE--SCG----GGGT--T
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCcc---HHHHHHHhHHHhHhhcCCCeEEEEC--CCH----HHHC--C
Confidence            68999998 9999999999999997 9988886432   222211222110    111111110  222    2344  7


Q ss_pred             CCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEec
Q 024488          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS  196 (267)
                      .|++|..+|....+  .....+....|....+.+.+.+.+.....+|.+.|
T Consensus        71 aD~Vi~a~g~p~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  119 (309)
T 1ur5_A           71 SDVIVVTSGAPRKP--GMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  119 (309)
T ss_dssp             CSEEEECCCC----------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred             CCEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence            89999999875321  12223456677777788888888776555554445

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.64  E-value=9.9e-05  Score=64.60  Aligned_cols=99  Identities=19%  Similarity=0.129  Sum_probs=61.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~  146 (267)
                      +++|+|+||+|+||..+++.+...|++|++++++..    ..+.++++   +.. ..+  |..+.   +.+.+.. ..++
T Consensus       164 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~----~~~~~~~~---Ga~-~~~--~~~~~~~~~~~~~~~-~~g~  232 (362)
T 2c0c_A          164 GKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDE----KSAFLKSL---GCD-RPI--NYKTEPVGTVLKQEY-PEGV  232 (362)
T ss_dssp             TCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHH----HHHHHHHT---TCS-EEE--ETTTSCHHHHHHHHC-TTCE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHH----HHHHHHHc---CCc-EEE--ecCChhHHHHHHHhc-CCCC
Confidence            389999999999999999999999999999985422    12223333   222 122  33322   2222222 2479


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEecccc
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCAT  199 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~  199 (267)
                      |++|+++|..                  .....++.++.  .+++|.+++...
T Consensus       233 D~vid~~g~~------------------~~~~~~~~l~~--~G~iv~~g~~~~  265 (362)
T 2c0c_A          233 DVVYESVGGA------------------MFDLAVDALAT--KGRLIVIGFISG  265 (362)
T ss_dssp             EEEEECSCTH------------------HHHHHHHHEEE--EEEEEECCCGGG
T ss_pred             CEEEECCCHH------------------HHHHHHHHHhc--CCEEEEEeCCCC
Confidence            9999999720                  12233444433  468998887554

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.63  E-value=0.00085  Score=58.00  Aligned_cols=116  Identities=14%  Similarity=0.052  Sum_probs=69.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhc---CCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQEL---FPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (267)
                      ++|.|.|| |.+|..++..|+..|+ +|++++++....+.....+.+.   .....++.+.    +|.   ++.++  +.
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~---~ea~~--~a   79 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----YSY---EAALT--GA   79 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE----CSH---HHHHT--TC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe----CCH---HHHhC--CC
Confidence            68999997 9999999999999998 9999996543222211111111   0111222211    333   33454  78


Q ss_pred             CEEEEccccCCcCCCcc---ChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEec
Q 024488          147 DAVMHFAAVAYVGESTL---DPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS  196 (267)
                      |+||..+|.......+.   ...+....|....+.+.+.+.+....-+|.+.|
T Consensus        80 DiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  132 (331)
T 1pzg_A           80 DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  132 (331)
T ss_dssp             SEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            99999998653221100   334556677777788888887765443443334

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.60  E-value=1.9e-05  Score=63.63  Aligned_cols=34  Identities=26%  Similarity=0.383  Sum_probs=30.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      ++|+|+||+|.+|+++++.|++.|++|++++|+.
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~   34 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRRE   34 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            3688999999999999999999999999998643

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.58  E-value=9e-05  Score=63.10  Aligned_cols=72  Identities=19%  Similarity=0.184  Sum_probs=48.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      ++|+|+||+|++|..+++.+...|++|++++++..+.+    .++++   +.. .  ..|..+.+++.+.+  .++|++|
T Consensus       127 ~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~----~~~~~---ga~-~--~~~~~~~~~~~~~~--~~~d~vi  194 (302)
T 1iz0_A          127 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA----LPLAL---GAE-E--AATYAEVPERAKAW--GGLDLVL  194 (302)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSH----HHHHT---TCS-E--EEEGGGHHHHHHHT--TSEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHhc---CCC-E--EEECCcchhHHHHh--cCceEEE
Confidence            89999999999999999999999999999996443322    22333   211 1  23554412333333  3799999


Q ss_pred             Ecccc
Q 024488          151 HFAAV  155 (267)
Q Consensus       151 ~~Ag~  155 (267)
                      + +|.
T Consensus       195 d-~g~  198 (302)
T 1iz0_A          195 E-VRG  198 (302)
T ss_dssp             E-CSC
T ss_pred             E-CCH
Confidence            9 873

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.57  E-value=0.00042  Score=59.70  Aligned_cols=114  Identities=14%  Similarity=0.015  Sum_probs=69.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcC---CCCCceEEEEccCCCHHHHHHHhhcCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELF---PEPGRLQFIYADLGDAKAVNKFFSENA  145 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (267)
                      +++|.|+|+ |.+|..++..|+..|+ +|+++|+.....+.....+....   ..+.++.. ..   |.    +.++  +
T Consensus         7 ~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~---d~----~a~~--~   75 (324)
T 3gvi_A            7 RNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AN---DY----AAIE--G   75 (324)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ES---SG----GGGT--T
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eC---CH----HHHC--C
Confidence            368999997 9999999999999998 99999965432221112222210   11122221 12   22    3444  7


Q ss_pred             CCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEec
Q 024488          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSST  196 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vSS  196 (267)
                      .|+||..||....  ...+..+.+..|....+.+.+.+.+... ..|+.+|-
T Consensus        76 aDiVIiaag~p~k--~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN  125 (324)
T 3gvi_A           76 ADVVIVTAGVPRK--PGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN  125 (324)
T ss_dssp             CSEEEECCSCCCC-------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             CCEEEEccCcCCC--CCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence            8999999987432  2234456677788888888888877653 35555553

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.57  E-value=9e-05  Score=66.72  Aligned_cols=34  Identities=24%  Similarity=0.098  Sum_probs=30.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      +++|+|+||+|+||...++.+...|++|++++++
T Consensus       221 g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~  254 (447)
T 4a0s_A          221 GDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSS  254 (447)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence            3899999999999999999999999999998853

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.57  E-value=0.00037  Score=56.94  Aligned_cols=70  Identities=17%  Similarity=0.179  Sum_probs=53.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHH-hhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~-~~~~~~D~l  149 (267)
                      ++++|.|+ |.+|+.+++.|.+.|+ |+++++++   +.. +.+.      ..+.++.+|.+|.+.++++ ++  +.|.+
T Consensus        10 ~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~---~~~-~~~~------~~~~~i~gd~~~~~~l~~a~i~--~ad~v   75 (234)
T 2aef_A           10 RHVVICGW-SESTLECLRELRGSEV-FVLAEDEN---VRK-KVLR------SGANFVHGDPTRVSDLEKANVR--GARAV   75 (234)
T ss_dssp             CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGG---GHH-HHHH------TTCEEEESCTTCHHHHHHTTCT--TCSEE
T ss_pred             CEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCH---HHH-HHHh------cCCeEEEcCCCCHHHHHhcCcc--hhcEE
Confidence            68999996 9999999999999999 99988532   222 1111      2477899999999988776 55  78999


Q ss_pred             EEccc
Q 024488          150 MHFAA  154 (267)
Q Consensus       150 i~~Ag  154 (267)
                      |.+.+
T Consensus        76 i~~~~   80 (234)
T 2aef_A           76 IVDLE   80 (234)
T ss_dssp             EECCS
T ss_pred             EEcCC
Confidence            87653

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.55  E-value=0.00016  Score=63.54  Aligned_cols=76  Identities=18%  Similarity=0.229  Sum_probs=50.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +++|+|+||+|+||...++.+...|++|+++++ ..   + .+.++++   +.. ..  .|..+.+..+++.+..++|++
T Consensus       184 g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~---~-~~~~~~l---Ga~-~v--~~~~~~~~~~~~~~~~g~D~v  252 (375)
T 2vn8_A          184 GKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QD---A-SELVRKL---GAD-DV--IDYKSGSVEEQLKSLKPFDFI  252 (375)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GG---G-HHHHHHT---TCS-EE--EETTSSCHHHHHHTSCCBSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hH---H-HHHHHHc---CCC-EE--EECCchHHHHHHhhcCCCCEE
Confidence            389999999999999999988889999988873 21   1 2333333   212 12  344443333333333579999


Q ss_pred             EEccccC
Q 024488          150 MHFAAVA  156 (267)
Q Consensus       150 i~~Ag~~  156 (267)
                      |+++|..
T Consensus       253 id~~g~~  259 (375)
T 2vn8_A          253 LDNVGGS  259 (375)
T ss_dssp             EESSCTT
T ss_pred             EECCCCh
Confidence            9999853

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.53  E-value=0.00088  Score=57.63  Aligned_cols=114  Identities=19%  Similarity=0.107  Sum_probs=71.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCC-CCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      ++|.|+| +|.+|..++..|+..|. +|+++|+.....+.....+.+... .+....+...  .|.    +.++  +.|+
T Consensus         6 ~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~----~a~~--~aDv   76 (321)
T 3p7m_A            6 KKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDY----KDLE--NSDV   76 (321)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCG----GGGT--TCSE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCH----HHHC--CCCE
Confidence            6888999 59999999999999988 999999654322222222222100 0112222211  122    3444  7899


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEe
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSS  195 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vS  195 (267)
                      ||..||....  ......+.+..|....+.+.+.+.+... ..++.+|
T Consensus        77 VIi~ag~p~k--~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           77 VIVTAGVPRK--PGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             EEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEcCCcCCC--CCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            9999987532  2345566778888888888888887754 3555554

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.49  E-value=0.00011  Score=64.88  Aligned_cols=75  Identities=24%  Similarity=0.201  Sum_probs=52.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +++|+|+|+ |+||+.+++.+...|++|++++++..   ++ +.+++..  +..+   ..|..+.+++.+++.  +.|+|
T Consensus       168 g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~---~l-~~~~~~~--g~~~---~~~~~~~~~l~~~l~--~aDvV  235 (377)
T 2vhw_A          168 PADVVVIGA-GTAGYNAARIANGMGATVTVLDINID---KL-RQLDAEF--CGRI---HTRYSSAYELEGAVK--RADLV  235 (377)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHH---HH-HHHHHHT--TTSS---EEEECCHHHHHHHHH--HCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHH---HH-HHHHHhc--CCee---EeccCCHHHHHHHHc--CCCEE
Confidence            489999997 99999999999999999999996432   22 1222211  1122   223445667777776  68999


Q ss_pred             EEccccC
Q 024488          150 MHFAAVA  156 (267)
Q Consensus       150 i~~Ag~~  156 (267)
                      |++++..
T Consensus       236 i~~~~~p  242 (377)
T 2vhw_A          236 IGAVLVP  242 (377)
T ss_dssp             EECCCCT
T ss_pred             EECCCcC
Confidence            9998754

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.49  E-value=0.00036  Score=59.28  Aligned_cols=115  Identities=13%  Similarity=0.151  Sum_probs=71.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcC-CCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      ++|.|+|+ |.+|..++..|+..|.  +|+++++.+...+.....+.... ..+....+...  +|.    +.++  +.|
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~----~a~~--~aD   71 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADY----SLLK--GSE   71 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCG----GGGT--TCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCH----HHhC--CCC
Confidence            46889998 9999999999999998  99999964322211111111111 01112222211  122    3444  789


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEec
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSST  196 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vSS  196 (267)
                      ++|..||....  ...+..+.+..|....+.+.+.+.+.+. ..|+.+|-
T Consensus        72 iVViaag~~~k--pG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN  119 (294)
T 1oju_A           72 IIVVTAGLARK--PGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             EEEECCCCCCC--SSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             EEEECCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence            99999997532  2345567788888888888888887754 44555553

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.49  E-value=0.00015  Score=60.95  Aligned_cols=73  Identities=16%  Similarity=0.289  Sum_probs=46.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+++|+|+ ||+|++++..|++.|++|++++|+..   ++.+..++....+ .+..  .|+   +++   .+ ++.|+||
T Consensus       120 ~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~---~a~~l~~~~~~~~-~~~~--~~~---~~~---~~-~~~DivI  185 (272)
T 1p77_A          120 QHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFS---KTKELAERFQPYG-NIQA--VSM---DSI---PL-QTYDLVI  185 (272)
T ss_dssp             CEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHH---HHHHHHHHHGGGS-CEEE--EEG---GGC---CC-SCCSEEE
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHccccC-CeEE--eeH---HHh---cc-CCCCEEE
Confidence            89999997 89999999999999999999996543   3333222221111 2222  232   111   11 3789999


Q ss_pred             EccccCC
Q 024488          151 HFAAVAY  157 (267)
Q Consensus       151 ~~Ag~~~  157 (267)
                      |+++...
T Consensus       186 n~t~~~~  192 (272)
T 1p77_A          186 NATSAGL  192 (272)
T ss_dssp             ECCCC--
T ss_pred             ECCCCCC
Confidence            9998654

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.49  E-value=0.0022  Score=54.94  Aligned_cols=114  Identities=19%  Similarity=0.182  Sum_probs=72.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC-C--CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEc-cCCCHHHHHHHhhcCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKD-S--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA-DLGDAKAVNKFFSENAF  146 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~-G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dl~d~~~v~~~~~~~~~  146 (267)
                      ++|.|+||+|.+|..++..|... +  .+++++|... ..+.....+...   ......... .-.+.+++    +  +.
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~---~~~~~v~~~~~~~~~~~~----~--~a   70 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI---PTAVKIKGFSGEDATPAL----E--GA   70 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTS---CSSEEEEEECSSCCHHHH----T--TC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCC---CCCceEEEecCCCcHHHh----C--CC
Confidence            46889999999999999999875 4  5899998643 211111122221   122222211 11234333    3  78


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEec
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSST  196 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vSS  196 (267)
                      |++|-.||...  ....+..+.+..|....+.+.+.+.+... ..|+.+|-
T Consensus        71 Divii~ag~~r--kpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtN  119 (312)
T 3hhp_A           71 DVVLISAGVAR--KPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN  119 (312)
T ss_dssp             SEEEECCSCSC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CEEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            99999999753  23456678888999888888888887754 45555553

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.48  E-value=0.00017  Score=62.58  Aligned_cols=74  Identities=20%  Similarity=0.212  Sum_probs=48.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC-HHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~D~  148 (267)
                      +++|||+||+|+||...++.+...|++|+++ ++..    ..+.++++   +  +..+. +-.+ .+.+.+.....++|+
T Consensus       151 g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~----~~~~~~~l---G--a~~i~-~~~~~~~~~~~~~~~~g~D~  219 (343)
T 3gaz_A          151 GQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGS----DLEYVRDL---G--ATPID-ASREPEDYAAEHTAGQGFDL  219 (343)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHH----HHHHHHHH---T--SEEEE-TTSCHHHHHHHHHTTSCEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHH----HHHHHHHc---C--CCEec-cCCCHHHHHHHHhcCCCceE
Confidence            3899999999999999999999999999988 4322    12333443   2  22222 2222 233344433357999


Q ss_pred             EEEccc
Q 024488          149 VMHFAA  154 (267)
Q Consensus       149 li~~Ag  154 (267)
                      +|+++|
T Consensus       220 vid~~g  225 (343)
T 3gaz_A          220 VYDTLG  225 (343)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999997

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.46  E-value=0.001  Score=57.12  Aligned_cols=114  Identities=17%  Similarity=0.135  Sum_probs=72.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCC--CCCcchhhhhhhcC---CCCCceEEEEccCCCHHHHHHHhhc
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS--RGNIGAVKVLQELF---PEPGRLQFIYADLGDAKAVNKFFSE  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~--~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~v~~~~~~  143 (267)
                      +++|.|+|+ |.+|..++..|+..|+ +|+++++..  ...+.....+....   ....++.. ..   |.    +.++ 
T Consensus         8 ~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~-t~---d~----~a~~-   77 (315)
T 3tl2_A            8 RKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG-TS---DY----ADTA-   77 (315)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE-ES---CG----GGGT-
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE-cC---CH----HHhC-
Confidence            378999996 9999999999999999 999999642  11111111111110   01112221 11   22    2333 


Q ss_pred             CCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEec
Q 024488          144 NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSST  196 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vSS  196 (267)
                       +.|++|..||....  ...+..+.+..|....+.+.+.+.+... ..++.+|-
T Consensus        78 -~aDvVIiaag~p~k--pg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN  128 (315)
T 3tl2_A           78 -DSDVVVITAGIARK--PGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN  128 (315)
T ss_dssp             -TCSEEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             -CCCEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence             78999999997532  2345577888888888888888887654 35555553

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.45  E-value=0.0023  Score=55.53  Aligned_cols=114  Identities=15%  Similarity=0.123  Sum_probs=71.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-------eEEEEecCCCCCcch---hhhhhhcCCCCCceEEEEccCCCHHHHHHH
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNIGA---VKVLQELFPEPGRLQFIYADLGDAKAVNKF  140 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-------~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~  140 (267)
                      -+|.|+||+|+||+.++..|+....       ++.++|... ....+   .-.+... ..+.....+..+  |.   .+.
T Consensus        25 vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~-~~~~~~Gva~DL~~~-~~~~~~~~~~~~--~~---~~a   97 (345)
T 4h7p_A           25 VKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEP-ALKALAGVEAELEDC-AFPLLDKVVVTA--DP---RVA   97 (345)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGG-GHHHHHHHHHHHHHT-TCTTEEEEEEES--CH---HHH
T ss_pred             CEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCC-ccccchhhhhhhhhc-CccCCCcEEEcC--Ch---HHH
Confidence            6899999999999999998887643       788888422 11111   1122222 111122222221  22   344


Q ss_pred             hhcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC-CC-EEEEEe
Q 024488          141 FSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VD-TLIYSS  195 (267)
Q Consensus       141 ~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~-~iV~vS  195 (267)
                      ++  +.|++|-.||...  ....+.++.++.|....+.+.+.+.+.. .. .|+.+|
T Consensus        98 ~~--~advVvi~aG~pr--kpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvs  150 (345)
T 4h7p_A           98 FD--GVAIAIMCGAFPR--KAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVG  150 (345)
T ss_dssp             TT--TCSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             hC--CCCEEEECCCCCC--CCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeC
Confidence            55  7899999999753  2345678889999999999999988753 33 444454

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.44  E-value=0.00018  Score=62.44  Aligned_cols=75  Identities=15%  Similarity=0.139  Sum_probs=49.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC--HHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~D  147 (267)
                      +++|+|+||+|+||...++.+...|++|++++++..    ..+.++++   +.. ..+  |..+  .+.+.++ ...++|
T Consensus       151 g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~----~~~~~~~l---Ga~-~vi--~~~~~~~~~~~~~-~~~g~D  219 (346)
T 3fbg_A          151 GKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNE----TIEWTKKM---GAD-IVL--NHKESLLNQFKTQ-GIELVD  219 (346)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHH----HHHHHHHH---TCS-EEE--CTTSCHHHHHHHH-TCCCEE
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHhc---CCc-EEE--ECCccHHHHHHHh-CCCCcc
Confidence            389999999999999999999999999999985332    22333343   211 122  2222  2334443 335799


Q ss_pred             EEEEcccc
Q 024488          148 AVMHFAAV  155 (267)
Q Consensus       148 ~li~~Ag~  155 (267)
                      ++|+++|.
T Consensus       220 vv~d~~g~  227 (346)
T 3fbg_A          220 YVFCTFNT  227 (346)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCc
Confidence            99999873

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.44  E-value=0.00015  Score=61.09  Aligned_cols=68  Identities=15%  Similarity=0.154  Sum_probs=47.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +|+++|+|+ ||+|++++..|++.|+ +|+++.|+..+.+++.   +       .+...     ..+++.+++.  ..|+
T Consensus       117 ~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la---~-------~~~~~-----~~~~~~~~~~--~aDi  178 (277)
T 3don_A          117 DAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWS---L-------NINKI-----NLSHAESHLD--EFDI  178 (277)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC---S-------CCEEE-----CHHHHHHTGG--GCSE
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH---H-------hcccc-----cHhhHHHHhc--CCCE
Confidence            389999996 8999999999999998 8999887543222111   1       12211     3455666665  6799


Q ss_pred             EEEcccc
Q 024488          149 VMHFAAV  155 (267)
Q Consensus       149 li~~Ag~  155 (267)
                      |||+...
T Consensus       179 VInaTp~  185 (277)
T 3don_A          179 IINTTPA  185 (277)
T ss_dssp             EEECCC-
T ss_pred             EEECccC
Confidence            9998654

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.42  E-value=0.00027  Score=61.86  Aligned_cols=73  Identities=14%  Similarity=0.186  Sum_probs=51.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      ++|+|+|+ |+||...++.+...|++|++++++..+   .....+++   +.. .  ..|..+.+.++++..  ++|++|
T Consensus       189 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~---~~~~~~~l---Ga~-~--v~~~~~~~~~~~~~~--~~D~vi  256 (366)
T 1yqd_A          189 KHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSK---KEEALKNF---GAD-S--FLVSRDQEQMQAAAG--TLDGII  256 (366)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGG---HHHHHHTS---CCS-E--EEETTCHHHHHHTTT--CEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHhc---CCc-e--EEeccCHHHHHHhhC--CCCEEE
Confidence            89999995 999999999999999999999864322   22211132   211 1  246667766766653  799999


Q ss_pred             Ecccc
Q 024488          151 HFAAV  155 (267)
Q Consensus       151 ~~Ag~  155 (267)
                      +++|.
T Consensus       257 d~~g~  261 (366)
T 1yqd_A          257 DTVSA  261 (366)
T ss_dssp             ECCSS
T ss_pred             ECCCc
Confidence            99984

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.40  E-value=0.00053  Score=58.55  Aligned_cols=110  Identities=18%  Similarity=0.173  Sum_probs=62.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCC---CCceEEEEccCCCHHHHHHHhhcCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPE---PGRLQFIYADLGDAKAVNKFFSENA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (267)
                      ++|.|+|| |.+|..++..|+..|+  +|++++++.   +.+.....++...   .....+..   .+.    +.++  +
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~---~~~~~~~~~l~~~~~~~~~~~i~~---~~~----~a~~--~   67 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDE---DRAQAEAEDIAHAAPVSHGTRVWH---GGH----SELA--D   67 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSH---HHHHHHHHHHTTSCCTTSCCEEEE---ECG----GGGT--T
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCH---HHHHHHHHhhhhhhhhcCCeEEEE---CCH----HHhC--C
Confidence            46889997 9999999999999999  999999643   2222112222110   11222221   132    2344  7


Q ss_pred             CCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEEe
Q 024488          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~vS  195 (267)
                      .|+||..++....+  .....+.+..|....+.+.+.+.+.... .||++|
T Consensus        68 aDvVIi~~~~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t  116 (304)
T 2v6b_A           68 AQVVILTAGANQKP--GESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS  116 (304)
T ss_dssp             CSEEEECC--------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred             CCEEEEcCCCCCCC--CCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            89999999864321  2223455667777778888888776433 444433

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.40  E-value=0.00018  Score=63.04  Aligned_cols=74  Identities=18%  Similarity=0.268  Sum_probs=49.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC--HHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~D  147 (267)
                      +++|+|+|| |+||..+++.+...|++|++++++..+.++ .+.++++   +  +..+  | .+  .+.+.+ .. .++|
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~-~~~~~~~---g--a~~v--~-~~~~~~~~~~-~~-~~~d  248 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVE-QTVIEET---K--TNYY--N-SSNGYDKLKD-SV-GKFD  248 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHH-HHHHHHH---T--CEEE--E-CTTCSHHHHH-HH-CCEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHH-HHHHHHh---C--Ccee--c-hHHHHHHHHH-hC-CCCC
Confidence            389999999 999999999999999999999964311022 2333333   1  2223  4 43  233444 22 5799


Q ss_pred             EEEEcccc
Q 024488          148 AVMHFAAV  155 (267)
Q Consensus       148 ~li~~Ag~  155 (267)
                      ++|+++|.
T Consensus       249 ~vid~~g~  256 (366)
T 2cdc_A          249 VIIDATGA  256 (366)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999984

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.38  E-value=0.00098  Score=57.23  Aligned_cols=113  Identities=18%  Similarity=0.181  Sum_probs=69.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCC-CCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      ++|.|+|| |.+|..++..|+..|  .+|+++|......+.....+..... .+..+.+.. |  +.    +.++  +.|
T Consensus         7 ~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~~----~a~~--~aD   76 (317)
T 3d0o_A            7 NKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--EY----SDCH--DAD   76 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--CG----GGGT--TCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--CH----HHhC--CCC
Confidence            68999998 999999999999888  4899998543211111111111111 112333332 2  22    3344  789


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEe
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSS  195 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vS  195 (267)
                      +||..||....  ......+....|....+.+.+.+.+... ..||++|
T Consensus        77 vVvi~ag~~~~--~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           77 LVVICAGAAQK--PGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             EEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEECCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            99999987532  2334456677888888888888887754 3444443

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.34  E-value=8.5e-05  Score=56.08  Aligned_cols=70  Identities=14%  Similarity=0.269  Sum_probs=47.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      ++|+|.|+ |++|+.+++.|.+.|++|++++|+.   ++..+..++.   +  ....  +..+.   .++++  +.|+||
T Consensus        22 ~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~---~~~~~~a~~~---~--~~~~--~~~~~---~~~~~--~~Divi   85 (144)
T 3oj0_A           22 NKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNI---DHVRAFAEKY---E--YEYV--LINDI---DSLIK--NNDVII   85 (144)
T ss_dssp             CEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCH---HHHHHHHHHH---T--CEEE--ECSCH---HHHHH--TCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCH---HHHHHHHHHh---C--CceE--eecCH---HHHhc--CCCEEE
Confidence            89999995 9999999999999999988888643   3333323333   1  2211  22333   34455  689999


Q ss_pred             EccccC
Q 024488          151 HFAAVA  156 (267)
Q Consensus       151 ~~Ag~~  156 (267)
                      ++.+..
T Consensus        86 ~at~~~   91 (144)
T 3oj0_A           86 TATSSK   91 (144)
T ss_dssp             ECSCCS
T ss_pred             EeCCCC
Confidence            987654

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.34  E-value=0.00022  Score=61.31  Aligned_cols=73  Identities=23%  Similarity=0.265  Sum_probs=46.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHH--HHHHHhhcCCCCEE
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK--AVNKFFSENAFDAV  149 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~--~v~~~~~~~~~D~l  149 (267)
                      +|+|+||+|++|...++.+...|++|++++++..+.    +.++++   +... .  .|..+.+  .++++ ...++|++
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~----~~~~~l---Ga~~-~--i~~~~~~~~~~~~~-~~~~~d~v  220 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEH----DYLRVL---GAKE-V--LAREDVMAERIRPL-DKQRWAAA  220 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCH----HHHHHT---TCSE-E--EECC---------C-CSCCEEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----HHHHHc---CCcE-E--EecCCcHHHHHHHh-cCCcccEE
Confidence            799999999999999998889999999998653322    223333   2111 1  2443331  22222 22479999


Q ss_pred             EEcccc
Q 024488          150 MHFAAV  155 (267)
Q Consensus       150 i~~Ag~  155 (267)
                      |+++|.
T Consensus       221 id~~g~  226 (328)
T 1xa0_A          221 VDPVGG  226 (328)
T ss_dssp             EECSTT
T ss_pred             EECCcH
Confidence            999873

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.31  E-value=0.00049  Score=58.77  Aligned_cols=24  Identities=25%  Similarity=0.329  Sum_probs=21.9

Q ss_pred             ChhHHHHHHHHHhCCCeEEEEecC
Q 024488           80 GYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        80 ggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      |-.|.++|++++++||+|+++.+.
T Consensus        65 GkmG~aiAe~~~~~Ga~V~lv~g~   88 (313)
T 1p9o_A           65 GRRGATSAEAFLAAGYGVLFLYRA   88 (313)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             cHHHHHHHHHHHHCCCEEEEEecC
Confidence            569999999999999999999863

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.31  E-value=0.00045  Score=59.26  Aligned_cols=115  Identities=17%  Similarity=0.103  Sum_probs=69.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCC-CCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      ++|.|+|+ |.+|..++..|+..|.  +|+++|+.....+.....+..... ..........|  +.    +.++  +.|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~----~a~~--~aD   71 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DY----GPTE--DSD   71 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SS----GGGT--TCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CH----HHhC--CCC
Confidence            46889996 9999999999999886  899999654322211112222100 01122222112  22    2333  789


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEec
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSST  196 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vSS  196 (267)
                      ++|..||....  ...+..+.+..|....+.+.+.+.+... ..|+.+|-
T Consensus        72 vVii~ag~~~k--pG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN  119 (314)
T 3nep_X           72 VCIITAGLPRS--PGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN  119 (314)
T ss_dssp             EEEECCCC---------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred             EEEECCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence            99999997532  2234567788888888889999888754 45555553

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.30  E-value=0.0026  Score=54.68  Aligned_cols=113  Identities=11%  Similarity=0.056  Sum_probs=66.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhc---CCCCCceEEEEccCCCHHHHHHHhhcCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQEL---FPEPGRLQFIYADLGDAKAVNKFFSENA  145 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (267)
                      +++|.|+|| |.+|..++..|+..|+ +|+++|++....+.....+++.   .....++... .   |.    +.++  +
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~---d~----~al~--~   72 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-N---TY----DDLA--G   72 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-C---CG----GGGT--T
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC-C---CH----HHhC--C
Confidence            368999997 9999999999999998 9999886543222211222211   0111122211 2   22    2344  7


Q ss_pred             CCEEEEccccCCcCCCccC-----hHHHHHHhHHHHHHHHHHHHHcCCC-EEEEEe
Q 024488          146 FDAVMHFAAVAYVGESTLD-----PLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~vS  195 (267)
                      .|+||..+|.....  ...     ..+....|....+.+.+.+.+.... .||++|
T Consensus        73 aD~Vi~a~g~p~k~--g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  126 (322)
T 1t2d_A           73 ADVVIVTAGFTKAP--GKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  126 (322)
T ss_dssp             CSEEEECCSCSSCT--TCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCEEEEeCCCCCCC--CCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            89999999864321  111     3445666666777777777766433 444443

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.30  E-value=0.0011  Score=56.28  Aligned_cols=115  Identities=15%  Similarity=0.167  Sum_probs=71.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCC-CCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      +||.|+|+ |+||..++..|+.++.  +++++|......+.....+..... .+........  .|++    .++  +.|
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~----~~~--~aD   71 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS----LLK--GSE   71 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGG----GGT--TCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHH----HhC--CCC
Confidence            46778895 9999999999988774  799988532111111111222110 1112222222  1332    233  789


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEec
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS  196 (267)
                      ++|-.||...  ....+..+.+..|....+.+.+.+.+....-+|.+-|
T Consensus        72 vVvitAG~pr--kpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs  118 (294)
T 2x0j_A           72 IIVVTAGLAR--KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             EEEECCCCCC--CSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEEEecCCCC--CCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence            9999999753  2345678889999999999999998887544444333

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.27  E-value=0.0014  Score=56.31  Aligned_cols=113  Identities=14%  Similarity=0.152  Sum_probs=66.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      ++|.|+|| |.+|..++..|+..+.  +|+++|+.....+.....+.........+.+.. |  +.    +.++  +.|+
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~~----~a~~--~aDv   75 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--EY----SDCK--DADL   75 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--CG----GGGT--TCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--CH----HHhC--CCCE
Confidence            68999998 9999999999998876  899998633222211122222111112333332 2  22    2344  7899


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEe
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSS  195 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vS  195 (267)
                      ||..||....+  .....+.+..|....+.+.+.+.+... ..||++|
T Consensus        76 Vii~ag~~~~~--g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  121 (318)
T 1ez4_A           76 VVITAGAPQKP--GESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (318)
T ss_dssp             EEECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            99999875321  223345667788888888888887753 4555554

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.27  E-value=0.0019  Score=55.68  Aligned_cols=115  Identities=13%  Similarity=0.076  Sum_probs=70.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCCCCceEEE-EccCCCHHHHHHHhhcCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFI-YADLGDAKAVNKFFSENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~v~~~~~~~~~  146 (267)
                      .++|.|+|+ |.+|..++..|+..|.  +|+++|......+.....+............. ..|..      . ++  +.
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~------~-~~--da   90 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYS------V-SA--GS   90 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSC------S-CS--SC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHH------H-hC--CC
Confidence            478999998 9999999999999987  89999863322222111122211111111222 23332      1 33  78


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEec
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSST  196 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vSS  196 (267)
                      |++|-.||....  ...+..+.+..|....+.+.+.+.+... ..++.+|-
T Consensus        91 DiVIitaG~p~k--pG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN  139 (330)
T 3ldh_A           91 KLVVITAGARQQ--EGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE  139 (330)
T ss_dssp             SEEEECCSCCCC--SSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             CEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence            999999997532  2334456777788878888888877653 44555553

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.26  E-value=0.0017  Score=55.91  Aligned_cols=113  Identities=15%  Similarity=0.173  Sum_probs=68.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      ++|.|+|| |.+|..++..|+..+.  +|+++|+.....+.....+.........+.+.. |  +.    +.++  +.|+
T Consensus        10 ~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~----~a~~--~aDv   79 (326)
T 2zqz_A           10 QKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EY----SDAK--DADL   79 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CG----GGGG--GCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CH----HHhC--CCCE
Confidence            68999998 9999999999988875  899998632212111111222111112333332 2  22    2344  7899


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEEe
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSS  195 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~iV~vS  195 (267)
                      ||..+|....  ......+.+..|....+.+.+.+.+.. ...||++|
T Consensus        80 Vii~ag~~~k--~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  125 (326)
T 2zqz_A           80 VVITAGAPQK--PGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             EEECCCCC-------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             EEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            9999987532  223445667788888888888887765 34566554

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.24  E-value=0.00049  Score=62.09  Aligned_cols=34  Identities=26%  Similarity=0.199  Sum_probs=30.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      +.+|+|+||+|+||...++.+...|++|++++++
T Consensus       229 g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~  262 (456)
T 3krt_A          229 GDNVLIWGASGGLGSYATQFALAGGANPICVVSS  262 (456)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECC
Confidence            3899999999999999999999999999998853

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.23  E-value=0.00033  Score=60.62  Aligned_cols=72  Identities=18%  Similarity=0.093  Sum_probs=48.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH---HHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~D  147 (267)
                      ++|+|+|| |+||..+++.+...|++|++++++..+    .+.++++   +.. .  ..|..+.   +.+.++.  +++|
T Consensus       166 ~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~----~~~~~~l---Ga~-~--~~d~~~~~~~~~~~~~~--~~~d  232 (339)
T 1rjw_A          166 EWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEK----LELAKEL---GAD-L--VVNPLKEDAAKFMKEKV--GGVH  232 (339)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHH----HHHHHHT---TCS-E--EECTTTSCHHHHHHHHH--SSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHC---CCC-E--EecCCCccHHHHHHHHh--CCCC
Confidence            89999999 889999999999999999999864322    2223333   211 1  2455543   2333333  4799


Q ss_pred             EEEEcccc
Q 024488          148 AVMHFAAV  155 (267)
Q Consensus       148 ~li~~Ag~  155 (267)
                      ++|+++|.
T Consensus       233 ~vid~~g~  240 (339)
T 1rjw_A          233 AAVVTAVS  240 (339)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999984

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.22  E-value=0.0012  Score=58.74  Aligned_cols=72  Identities=14%  Similarity=0.264  Sum_probs=54.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHH-hhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~-~~~~~~D~l  149 (267)
                      ++|+|.|. |-+|+.+++.|.+.|++|+++++++   +.. +.+++.     .+.++.+|.++++.++++ ++  +.|+|
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~---~~v-~~~~~~-----g~~vi~GDat~~~~L~~agi~--~A~~v   72 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDP---DHI-ETLRKF-----GMKVFYGDATRMDLLESAGAA--KAEVL   72 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCH---HHH-HHHHHT-----TCCCEESCTTCHHHHHHTTTT--TCSEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCH---HHH-HHHHhC-----CCeEEEcCCCCHHHHHhcCCC--ccCEE
Confidence            57999995 9999999999999999999999543   222 222221     456789999999988876 44  67998


Q ss_pred             EEccc
Q 024488          150 MHFAA  154 (267)
Q Consensus       150 i~~Ag  154 (267)
                      |.+.+
T Consensus        73 iv~~~   77 (413)
T 3l9w_A           73 INAID   77 (413)
T ss_dssp             EECCS
T ss_pred             EECCC
Confidence            87653

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.22  E-value=0.0018  Score=55.47  Aligned_cols=114  Identities=17%  Similarity=0.080  Sum_probs=71.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      ++|.|+|| |.+|..++..|+..+  .+|+++|......+.....+.+.......+.+.. |  +.+    .++  +.|+
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~----a~~--~aD~   70 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYG----DLE--GARA   70 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG----GGT--TEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHH----HhC--CCCE
Confidence            47889997 999999999999887  5899999643212111111211111112333332 2  332    344  7899


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEec
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSST  196 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vSS  196 (267)
                      ||..||....  ......+....|....+.+.+.+.+... ..||++|-
T Consensus        71 Vii~ag~~~~--~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  117 (310)
T 2xxj_A           71 VVLAAGVAQR--PGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATN  117 (310)
T ss_dssp             EEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EEECCCCCCC--CCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            9999987532  2334556777888888888888887753 46666543

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.18  E-value=0.0036  Score=53.65  Aligned_cols=113  Identities=16%  Similarity=0.199  Sum_probs=67.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCC-CCCceEEEEccCCCHHHHHHHhhcCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (267)
                      +++|.|+|+ |.+|..++..|+..|.  +|+++|++....+.....+.+... .+....+.. |  +.    +.++  +.
T Consensus         6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~----~al~--~a   75 (316)
T 1ldn_A            6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DY----DDCR--DA   75 (316)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CG----GGTT--TC
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cH----HHhC--CC
Confidence            478999998 9999999999988774  899999643211111111222111 111333332 2  22    2344  78


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEE
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYS  194 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~v  194 (267)
                      |+||..++......  ....+.+..|....+.+.+.+.+.... .++++
T Consensus        76 DvViia~~~~~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~  122 (316)
T 1ldn_A           76 DLVVICAGANQKPG--ETRLDLVDKNIAIFRSIVESVMASGFQGLFLVA  122 (316)
T ss_dssp             SEEEECCSCCCCTT--TCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred             CEEEEcCCCCCCCC--CCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEe
Confidence            99999998754322  222455667777777788887776543 44443

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.16  E-value=0.0013  Score=57.02  Aligned_cols=77  Identities=17%  Similarity=0.140  Sum_probs=49.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEcc--CCCHHHHHHHhh---cC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD--LGDAKAVNKFFS---EN  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D--l~d~~~v~~~~~---~~  144 (267)
                      +++|||+|+ |++|...++.+...|++|++++++..    ..+.++++   +.. ..+..+  -...+.+.+...   ..
T Consensus       169 g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~----~~~~~~~l---Ga~-~~~~~~~~~~~~~~i~~~~~~~~g~  239 (352)
T 1e3j_A          169 GTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPR----RLEVAKNC---GAD-VTLVVDPAKEEESSIIERIRSAIGD  239 (352)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHT---TCS-EEEECCTTTSCHHHHHHHHHHHSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHH----HHHHHHHh---CCC-EEEcCcccccHHHHHHHHhccccCC
Confidence            389999996 99999999888889999988885332    22233333   222 222211  222445555543   34


Q ss_pred             CCCEEEEcccc
Q 024488          145 AFDAVMHFAAV  155 (267)
Q Consensus       145 ~~D~li~~Ag~  155 (267)
                      ++|++|+++|.
T Consensus       240 g~D~vid~~g~  250 (352)
T 1e3j_A          240 LPNVTIDCSGN  250 (352)
T ss_dssp             CCSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.13  E-value=0.0012  Score=56.00  Aligned_cols=81  Identities=16%  Similarity=0.188  Sum_probs=54.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCC------------------CcchhhhhhhcCCCCCceEEEEccC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRG------------------NIGAVKVLQELFPEPGRLQFIYADL  131 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~Dl  131 (267)
                      ++|+|.| .||+|.++++.|+..|. +++++|...-.                  .+.+.+.++++. ..-+++.+..++
T Consensus        37 ~~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iN-P~v~v~~~~~~l  114 (292)
T 3h8v_A           37 FAVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNIN-PDVLFEVHNYNI  114 (292)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHC-TTSEEEEECCCT
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhC-CCcEEEEecccC
Confidence            7999998 69999999999999995 88888864311                  111222233331 123566677788


Q ss_pred             CCHHHHHHHhhc---------CCCCEEEEcc
Q 024488          132 GDAKAVNKFFSE---------NAFDAVMHFA  153 (267)
Q Consensus       132 ~d~~~v~~~~~~---------~~~D~li~~A  153 (267)
                      ++.+.++.+++.         .++|+||.+.
T Consensus       115 ~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          115 TTVENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             TSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             CcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence            877777766521         2789999764

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.13  E-value=0.0004  Score=60.26  Aligned_cols=97  Identities=12%  Similarity=0.127  Sum_probs=59.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHH---HHHHHhhcCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---AVNKFFSENAF  146 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~v~~~~~~~~~  146 (267)
                      ++|+|+|+ |+||...++.+...|+ +|++++++..    ..+.++++   +.. ..  .|..+.+   .+.++....++
T Consensus       169 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~----~~~~~~~~---Ga~-~~--~~~~~~~~~~~v~~~~~g~g~  237 (348)
T 2d8a_A          169 KSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDF----RRELAKKV---GAD-YV--INPFEEDVVKEVMDITDGNGV  237 (348)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHH----HHHHHHHH---TCS-EE--ECTTTSCHHHHHHHHTTTSCE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH----HHHHHHHh---CCC-EE--ECCCCcCHHHHHHHHcCCCCC
Confidence            78999999 9999999999999999 9999886432    22233333   111 11  3443322   33333322369


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEecc
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTC  197 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~  197 (267)
                      |++|+++|..                 ......++.++.  .+++|.+++.
T Consensus       238 D~vid~~g~~-----------------~~~~~~~~~l~~--~G~iv~~g~~  269 (348)
T 2d8a_A          238 DVFLEFSGAP-----------------KALEQGLQAVTP--AGRVSLLGLY  269 (348)
T ss_dssp             EEEEECSCCH-----------------HHHHHHHHHEEE--EEEEEECCCC
T ss_pred             CEEEECCCCH-----------------HHHHHHHHHHhc--CCEEEEEccC
Confidence            9999999831                 112333444432  4689988764

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.11  E-value=0.0032  Score=52.16  Aligned_cols=78  Identities=22%  Similarity=0.235  Sum_probs=49.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCc----------------ch---hhhhhhcCCCCCceEEEEcc
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNI----------------GA---VKVLQELFPEPGRLQFIYAD  130 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~----------------~~---~~~~~~~~~~~~~~~~~~~D  130 (267)
                      ++|+|.|+ ||+|.++++.|+..|. +++++|...-...                ++   .+.+.++. ...+++.+..+
T Consensus        29 ~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n-p~~~v~~~~~~  106 (251)
T 1zud_1           29 SQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLN-PDIQLTALQQR  106 (251)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHC-TTSEEEEECSC
T ss_pred             CcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHC-CCCEEEEEecc
Confidence            78999995 8899999999999997 7888875321111                11   11122221 12234555555


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEcc
Q 024488          131 LGDAKAVNKFFSENAFDAVMHFA  153 (267)
Q Consensus       131 l~d~~~v~~~~~~~~~D~li~~A  153 (267)
                      ++ .+.+.++++  +.|+||++.
T Consensus       107 ~~-~~~~~~~~~--~~DvVi~~~  126 (251)
T 1zud_1          107 LT-GEALKDAVA--RADVVLDCT  126 (251)
T ss_dssp             CC-HHHHHHHHH--HCSEEEECC
T ss_pred             CC-HHHHHHHHh--cCCEEEECC
Confidence            54 456677777  689999874

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.10  E-value=0.0013  Score=55.24  Aligned_cols=72  Identities=22%  Similarity=0.261  Sum_probs=47.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +|+++|+|+ ||+|++++..|++.|+ +|+++.|+.   +++.+..+++..  ..+..+  ++.+   +..    ...|+
T Consensus       120 ~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~---~~a~~la~~~~~--~~~~~~--~~~~---l~~----~~~Di  184 (272)
T 3pwz_A          120 NRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDM---AKALALRNELDH--SRLRIS--RYEA---LEG----QSFDI  184 (272)
T ss_dssp             TSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCH---HHHHHHHHHHCC--TTEEEE--CSGG---GTT----CCCSE
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCH---HHHHHHHHHhcc--CCeeEe--eHHH---hcc----cCCCE
Confidence            389999996 8999999999999996 999988643   333333344322  233333  2222   111    27899


Q ss_pred             EEEccccC
Q 024488          149 VMHFAAVA  156 (267)
Q Consensus       149 li~~Ag~~  156 (267)
                      |||+....
T Consensus       185 vInaTp~g  192 (272)
T 3pwz_A          185 VVNATSAS  192 (272)
T ss_dssp             EEECSSGG
T ss_pred             EEECCCCC
Confidence            99986543

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.09  E-value=0.0081  Score=52.55  Aligned_cols=119  Identities=13%  Similarity=0.085  Sum_probs=71.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-----eEEEEecCCCCC-cchhhhhhhcCCCC-CceEEEEccCCCHHHHHHHhh
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-----RVTIVDNLSRGN-IGAVKVLQELFPEP-GRLQFIYADLGDAKAVNKFFS  142 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-----~V~~~~r~~~~~-~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~  142 (267)
                      ..+|.|+||+|.||.+++-.|+..+.     .+.+.+...... +.+.-...++.... +-..-+.  +.+ ++ .+.++
T Consensus        32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~--i~~-~~-y~~~~  107 (375)
T 7mdh_A           32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVS--IGI-DP-YEVFE  107 (375)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEE--EES-CH-HHHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcE--Eec-CC-HHHhC
Confidence            47899999999999999999998764     266655322221 11222222221111 1111111  111 11 23333


Q ss_pred             cCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHc-C-CCEEEEEec
Q 024488          143 ENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-G-VDTLIYSST  196 (267)
Q Consensus       143 ~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~-~~~iV~vSS  196 (267)
                        +.|++|-.||...  ....+..+.++.|....+.+.+.+.+. + ...|+.+|-
T Consensus       108 --daDvVVitag~pr--kpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN  159 (375)
T 7mdh_A          108 --DVDWALLIGAKPR--GPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN  159 (375)
T ss_dssp             --TCSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             --CCCEEEEcCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence              7899999998643  234566788899999999999998875 3 455665654

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.07  E-value=0.0028  Score=54.39  Aligned_cols=113  Identities=19%  Similarity=0.192  Sum_probs=66.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      ++|.|.|+ |.+|..++..|+..|+  +|++++++....+.....+...........+. .  +|.+    .++  +.|+
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~d~~----~~~--~aDv   70 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY-A--GDYA----DLK--GSDV   70 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE-E--CCGG----GGT--TCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE-e--CCHH----HhC--CCCE
Confidence            36889997 9999999999999999  99999964322222111111110000112221 1  2322    344  7899


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEe
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSS  195 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vS  195 (267)
                      ||.+++....  ......+....|....+.+++.+.+... ..||.+|
T Consensus        71 Viiav~~~~~--~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~t  116 (319)
T 1a5z_A           71 VIVAAGVPQK--PGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (319)
T ss_dssp             EEECCCCCCC--SSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEccCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            9999886432  1223445666777777778888776543 3455543

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.07  E-value=0.0012  Score=55.64  Aligned_cols=72  Identities=13%  Similarity=0.195  Sum_probs=46.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +++++|+|+ ||+|++++..|++.|+ +|+++.|+..   ++.+..+++... ..+.....+  +      +.  .+.|+
T Consensus       126 ~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~---~a~~la~~~~~~-~~~~~~~~~--~------l~--~~aDi  190 (281)
T 3o8q_A          126 GATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFA---KAEQLAELVAAY-GEVKAQAFE--Q------LK--QSYDV  190 (281)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHH---HHHHHHHHHGGG-SCEEEEEGG--G------CC--SCEEE
T ss_pred             CCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHH---HHHHHHHHhhcc-CCeeEeeHH--H------hc--CCCCE
Confidence            389999996 8999999999999996 9999986543   333333333211 123333221  1      11  26899


Q ss_pred             EEEccccC
Q 024488          149 VMHFAAVA  156 (267)
Q Consensus       149 li~~Ag~~  156 (267)
                      |||+....
T Consensus       191 IInaTp~g  198 (281)
T 3o8q_A          191 IINSTSAS  198 (281)
T ss_dssp             EEECSCCC
T ss_pred             EEEcCcCC
Confidence            99987553

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.07  E-value=0.0011  Score=59.91  Aligned_cols=72  Identities=17%  Similarity=0.271  Sum_probs=54.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+|+|.| .|-+|+++|+.|.++|++|++++++   .+.+.+..+++     .+..+.+|-++++.++++=- .+.|++|
T Consensus         4 M~iiI~G-~G~vG~~la~~L~~~~~~v~vId~d---~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Agi-~~ad~~i   73 (461)
T 4g65_A            4 MKIIILG-AGQVGGTLAENLVGENNDITIVDKD---GDRLRELQDKY-----DLRVVNGHASHPDVLHEAGA-QDADMLV   73 (461)
T ss_dssp             EEEEEEC-CSHHHHHHHHHTCSTTEEEEEEESC---HHHHHHHHHHS-----SCEEEESCTTCHHHHHHHTT-TTCSEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCCEEEEECC---HHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcCC-CcCCEEE
Confidence            7899999 5899999999999999999999943   33332222222     57789999999998887632 2678888


Q ss_pred             Ec
Q 024488          151 HF  152 (267)
Q Consensus       151 ~~  152 (267)
                      -.
T Consensus        74 a~   75 (461)
T 4g65_A           74 AV   75 (461)
T ss_dssp             EC
T ss_pred             EE
Confidence            54

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.05  E-value=0.0017  Score=56.60  Aligned_cols=77  Identities=18%  Similarity=0.095  Sum_probs=51.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhh----cCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS----ENA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~----~~~  145 (267)
                      ++|||+|+ |++|...++.+...|++ |+++++++.    ..+.++++ .  ..+..+..|-.+.+++.+.+.    ..+
T Consensus       181 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~----~~~~a~~l-~--~~~~~~~~~~~~~~~~~~~v~~~t~g~g  252 (363)
T 3m6i_A          181 DPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEG----RLKFAKEI-C--PEVVTHKVERLSAEESAKKIVESFGGIE  252 (363)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHH----HHHHHHHH-C--TTCEEEECCSCCHHHHHHHHHHHTSSCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH----HHHHHHHh-c--hhcccccccccchHHHHHHHHHHhCCCC
Confidence            78999998 99999999888889997 888875432    22333343 1  233334455445555444333    247


Q ss_pred             CCEEEEcccc
Q 024488          146 FDAVMHFAAV  155 (267)
Q Consensus       146 ~D~li~~Ag~  155 (267)
                      +|++|+++|.
T Consensus       253 ~Dvvid~~g~  262 (363)
T 3m6i_A          253 PAVALECTGV  262 (363)
T ss_dssp             CSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.03  E-value=0.0045  Score=53.32  Aligned_cols=112  Identities=18%  Similarity=0.167  Sum_probs=67.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcC---CCCCceEEEEccCCCHHHHHHHhhcCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELF---PEPGRLQFIYADLGDAKAVNKFFSENAF  146 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (267)
                      ++|.|.|| |.+|..++..|+..|+ +|++++++....+.....+.+..   ....++... .   |.    +.++  +.
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~---d~----~al~--~a   83 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-N---NY----EYLQ--NS   83 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-S---CG----GGGT--TC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-C---CH----HHHC--CC
Confidence            58999997 9999999999999998 99999975432222111111110   111223221 2   22    2344  78


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEEe
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~vS  195 (267)
                      |+||-.+|.....  .....+....|....+.+.+.+.+.... .+|++|
T Consensus        84 D~VI~avg~p~k~--g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  131 (328)
T 2hjr_A           84 DVVIITAGVPRKP--NMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICIT  131 (328)
T ss_dssp             SEEEECCSCCCCT--TCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CEEEEcCCCCCCC--CCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999999864321  1222345566777777778877765443 444443

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.03  E-value=0.0011  Score=57.88  Aligned_cols=76  Identities=14%  Similarity=0.106  Sum_probs=49.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC-HHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~D~  148 (267)
                      +++|+|+| +|++|...++.+...|++|++++++..+    .+.++++   +.. ..+.-+-.+ .+.+.++....++|+
T Consensus       190 g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~----~~~~~~l---Ga~-~vi~~~~~~~~~~v~~~~~g~g~D~  260 (363)
T 3uog_A          190 GDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREK----LDRAFAL---GAD-HGINRLEEDWVERVYALTGDRGADH  260 (363)
T ss_dssp             TCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHH----HHHHHHH---TCS-EEEETTTSCHHHHHHHHHTTCCEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchh----HHHHHHc---CCC-EEEcCCcccHHHHHHHHhCCCCceE
Confidence            38999999 8999999999888899999999854322    2223443   211 222222122 234444444347999


Q ss_pred             EEEccc
Q 024488          149 VMHFAA  154 (267)
Q Consensus       149 li~~Ag  154 (267)
                      +|+++|
T Consensus       261 vid~~g  266 (363)
T 3uog_A          261 ILEIAG  266 (363)
T ss_dssp             EEEETT
T ss_pred             EEECCC
Confidence            999998

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.01  E-value=0.0012  Score=57.55  Aligned_cols=80  Identities=16%  Similarity=0.140  Sum_probs=48.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEcc-C--CC-HHHHHHHh--hcC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD-L--GD-AKAVNKFF--SEN  144 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-l--~d-~~~v~~~~--~~~  144 (267)
                      .+|+|+||+|++|...++.+...|++|+++.++....++..+.++++   +.. ..+..+ .  .+ .+.+.++.  ...
T Consensus       169 ~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~l---Ga~-~vi~~~~~~~~~~~~~i~~~t~~~~~  244 (364)
T 1gu7_A          169 DWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL---GAT-QVITEDQNNSREFGPTIKEWIKQSGG  244 (364)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH---TCS-EEEEHHHHHCGGGHHHHHHHHHHHTC
T ss_pred             cEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhc---CCe-EEEecCccchHHHHHHHHHHhhccCC
Confidence            79999999999999988888788999998875332211112233343   211 122211 0  11 22344443  234


Q ss_pred             CCCEEEEccc
Q 024488          145 AFDAVMHFAA  154 (267)
Q Consensus       145 ~~D~li~~Ag  154 (267)
                      ++|++|+++|
T Consensus       245 g~Dvvid~~G  254 (364)
T 1gu7_A          245 EAKLALNCVG  254 (364)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7999999987

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=97.01  E-value=0.0072  Score=51.46  Aligned_cols=109  Identities=16%  Similarity=0.165  Sum_probs=66.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      +++|.|+|| |.+|..++..|+..|.  +|++.|.... .......+....  ..++.. ..   |.    +.++  +.|
T Consensus        14 ~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~-~~g~a~dl~~~~--~~~i~~-t~---d~----~~l~--~aD   79 (303)
T 2i6t_A           14 VNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEG-TKGATMDLEIFN--LPNVEI-SK---DL----SASA--HSK   79 (303)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC------CHHHHHHHT--CTTEEE-ES---CG----GGGT--TCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcc-hHHHHHHHhhhc--CCCeEE-eC---CH----HHHC--CCC
Confidence            478999995 8999999999999998  9999997543 221111222221  124443 22   32    2344  789


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEe
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSS  195 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vS  195 (267)
                      +||..+|...  + .....+....|....+.+.+.+.+... ..|+++|
T Consensus        80 ~Vi~aag~~~--p-G~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~s  125 (303)
T 2i6t_A           80 VVIFTVNSLG--S-SQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVAS  125 (303)
T ss_dssp             EEEECCCC-------CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECS
T ss_pred             EEEEcCCCCC--C-CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcC
Confidence            9999999842  2 234456677777777777777776543 3444443

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=96.97  E-value=0.0083  Score=51.17  Aligned_cols=115  Identities=17%  Similarity=0.168  Sum_probs=67.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCCCCCcchhhhhhhcCC-CCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      ++|.|.|+ |.+|..++..|+..  |++|++++++....+.....+.+... ......+...  +|.+   . ++  +.|
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~~---~-l~--~aD   71 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYA---D-TA--NSD   71 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGG---G-GT--TCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CCHH---H-HC--CCC
Confidence            36889997 99999999999985  79999999754322221111111000 0011111110  2332   2 33  789


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEEec
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSST  196 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~iV~vSS  196 (267)
                      ++|-+++...  .......+.+..|......+.+.+.+.. ...+|.++-
T Consensus        72 vViiav~~p~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tN  119 (310)
T 1guz_A           72 IVIITAGLPR--KPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSN  119 (310)
T ss_dssp             EEEECCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCS
T ss_pred             EEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcC
Confidence            9999997532  1122345666777777788888887764 345555543

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.97  E-value=0.0069  Score=51.80  Aligned_cols=113  Identities=19%  Similarity=0.112  Sum_probs=65.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhc---CCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQEL---FPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (267)
                      ++|.|.|+ |.+|..++..|+..|+ +|++++++....+.....+...   .....++... .   |.    +.++  +.
T Consensus         5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~---d~----~a~~--~a   73 (317)
T 2ewd_A            5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT-D---DY----ADIS--GS   73 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-S---CG----GGGT--TC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC-C---CH----HHhC--CC
Confidence            68999997 9999999999999998 9999997543222211011110   0011122211 2   22    2334  78


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEec
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSST  196 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vSS  196 (267)
                      |+||.++|.....  .....+....|....+.+++.+.+... ..+|++|.
T Consensus        74 DiVi~avg~p~~~--g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN  122 (317)
T 2ewd_A           74 DVVIITASIPGRP--KDDRSELLFGNARILDSVAEGVKKYCPNAFVICITN  122 (317)
T ss_dssp             SEEEECCCCSSCC--SSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             CEEEEeCCCCCCC--CCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            9999999875322  223344455566666677777766543 34554443

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=96.96  E-value=0.00052  Score=62.00  Aligned_cols=34  Identities=21%  Similarity=0.185  Sum_probs=30.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      +|+|+|||++ +||+.+|+.|.+.|++|+++++++
T Consensus       265 GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~  298 (488)
T 3ond_A          265 GKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDP  298 (488)
T ss_dssp             TCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCH
Confidence            3999999976 999999999999999999998643

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.96  E-value=0.0011  Score=57.36  Aligned_cols=72  Identities=17%  Similarity=0.244  Sum_probs=47.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~  146 (267)
                      .+|+|+|| |++|...++.+...|+ +|++++++..+.    +.++++ .   . .  ..|..+.   +.+.++. ..++
T Consensus       166 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~----~~~~~l-a---~-~--v~~~~~~~~~~~~~~~~-~~g~  232 (343)
T 2dq4_A          166 KSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRL----AFARPY-A---D-R--LVNPLEEDLLEVVRRVT-GSGV  232 (343)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHH----GGGTTT-C---S-E--EECTTTSCHHHHHHHHH-SSCE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH----HHHHHh-H---H-h--ccCcCccCHHHHHHHhc-CCCC
Confidence            78999999 9999999998888999 999998643221    222222 1   1 1  1344332   2333333 3479


Q ss_pred             CEEEEcccc
Q 024488          147 DAVMHFAAV  155 (267)
Q Consensus       147 D~li~~Ag~  155 (267)
                      |++|+++|.
T Consensus       233 D~vid~~g~  241 (343)
T 2dq4_A          233 EVLLEFSGN  241 (343)
T ss_dssp             EEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999973

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.93  E-value=0.0038  Score=52.39  Aligned_cols=31  Identities=16%  Similarity=0.282  Sum_probs=26.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHh-CCCeEEEEe
Q 024488           71 THVLVTGGAGYIGSHAALRLLK-DSYRVTIVD  101 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~-~G~~V~~~~  101 (267)
                      ++|.|+|++|.+|+.+++.+.+ .|++|+.+.
T Consensus         6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~   37 (273)
T 1dih_A            6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAAL   37 (273)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEE
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence            6899999999999999999874 578887443

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.92  E-value=0.0016  Score=57.10  Aligned_cols=72  Identities=15%  Similarity=0.159  Sum_probs=49.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      .+|||+|+ |++|...++.+...|++|+++++++.+.    +.++++   +.. .  ..|..+.+.++++.  .++|++|
T Consensus       196 ~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~----~~a~~l---Ga~-~--vi~~~~~~~~~~~~--~g~Dvvi  262 (369)
T 1uuf_A          196 KKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKR----EAAKAL---GAD-E--VVNSRNADEMAAHL--KSFDFIL  262 (369)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGH----HHHHHH---TCS-E--EEETTCHHHHHTTT--TCEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHc---CCc-E--EeccccHHHHHHhh--cCCCEEE
Confidence            79999997 8999999988888999999988644322    223333   211 1  24555665555444  3799999


Q ss_pred             Ecccc
Q 024488          151 HFAAV  155 (267)
Q Consensus       151 ~~Ag~  155 (267)
                      +++|.
T Consensus       263 d~~g~  267 (369)
T 1uuf_A          263 NTVAA  267 (369)
T ss_dssp             ECCSS
T ss_pred             ECCCC
Confidence            99884

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=96.88  E-value=0.0066  Score=51.78  Aligned_cols=113  Identities=13%  Similarity=0.081  Sum_probs=65.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      +++|.|.|+ |.+|..++..|+..|+  +|++++++....+.....+.+.............  ++.+    .++  +.|
T Consensus         7 ~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~----~~~--~aD   77 (319)
T 1lld_A            7 PTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPE----ICR--DAD   77 (319)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGG----GGT--TCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCHH----HhC--CCC
Confidence            368999997 9999999999999999  9999996431111000001111000011222111  1222    233  789


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEE
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIY  193 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~  193 (267)
                      +||-+++....  ......+....|....+.+++.+.+.....+|.
T Consensus        78 ~Vii~v~~~~~--~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi  121 (319)
T 1lld_A           78 MVVITAGPRQK--PGQSRLELVGATVNILKAIMPNLVKVAPNAIYM  121 (319)
T ss_dssp             EEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred             EEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEE
Confidence            99999975432  123445666777777777888877654333333

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.87  E-value=0.0056  Score=53.67  Aligned_cols=69  Identities=23%  Similarity=0.274  Sum_probs=52.0

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      .+|+|+|.| +|.+|+.+++.+.+.|++|++++..+...  ..+    .     --.++..|..|.+.+.++++  .+|+
T Consensus        11 ~~~~IlIlG-~G~lg~~la~aa~~lG~~viv~d~~~~~p--~~~----~-----ad~~~~~~~~d~~~l~~~~~--~~dv   76 (377)
T 3orq_A           11 FGATIGIIG-GGQLGKMMAQSAQKMGYKVVVLDPSEDCP--CRY----V-----AHEFIQAKYDDEKALNQLGQ--KCDV   76 (377)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCT--TGG----G-----SSEEEECCTTCHHHHHHHHH--HCSE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCCCh--hhh----h-----CCEEEECCCCCHHHHHHHHH--hCCc
Confidence            348999999 68899999999999999999998543211  111    1     11356789999999999988  5787


Q ss_pred             EEE
Q 024488          149 VMH  151 (267)
Q Consensus       149 li~  151 (267)
                      |+-
T Consensus        77 i~~   79 (377)
T 3orq_A           77 ITY   79 (377)
T ss_dssp             EEE
T ss_pred             cee
Confidence            743

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.86  E-value=0.0011  Score=57.86  Aligned_cols=72  Identities=19%  Similarity=0.235  Sum_probs=47.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH-HHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~D~l  149 (267)
                      ++|||+|+ |++|...++.+...|++|++++++..+.    +.++++   +.. ..  .|..+. +..+++.  +++|++
T Consensus       181 ~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~----~~~~~l---Ga~-~v--~~~~~~~~~~~~~~--~~~D~v  247 (360)
T 1piw_A          181 KKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKR----EDAMKM---GAD-HY--IATLEEGDWGEKYF--DTFDLI  247 (360)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTH----HHHHHH---TCS-EE--EEGGGTSCHHHHSC--SCEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHH----HHHHHc---CCC-EE--EcCcCchHHHHHhh--cCCCEE
Confidence            89999999 9999999988888899999998654432    222333   111 12  233332 2233332  479999


Q ss_pred             EEcccc
Q 024488          150 MHFAAV  155 (267)
Q Consensus       150 i~~Ag~  155 (267)
                      |+++|.
T Consensus       248 id~~g~  253 (360)
T 1piw_A          248 VVCASS  253 (360)
T ss_dssp             EECCSC
T ss_pred             EECCCC
Confidence            999985

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.85  E-value=0.0033  Score=54.89  Aligned_cols=75  Identities=20%  Similarity=0.213  Sum_probs=46.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHh-CCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC--HHHHHHHhhcCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~  146 (267)
                      +.+|||+||+|++|...++.+.. .|++|++++++..    ..+.++++   +.. ..  .|..+  .+.+.++ ...++
T Consensus       172 g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~----~~~~~~~l---Gad-~v--i~~~~~~~~~v~~~-~~~g~  240 (363)
T 4dvj_A          172 APAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPE----TQEWVKSL---GAH-HV--IDHSKPLAAEVAAL-GLGAP  240 (363)
T ss_dssp             EEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHH----HHHHHHHT---TCS-EE--ECTTSCHHHHHHTT-CSCCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHH----HHHHHHHc---CCC-EE--EeCCCCHHHHHHHh-cCCCc
Confidence            38999999999999887766655 5899999985332    22333443   212 11  23322  2233332 22579


Q ss_pred             CEEEEcccc
Q 024488          147 DAVMHFAAV  155 (267)
Q Consensus       147 D~li~~Ag~  155 (267)
                      |++|.++|.
T Consensus       241 Dvvid~~g~  249 (363)
T 4dvj_A          241 AFVFSTTHT  249 (363)
T ss_dssp             EEEEECSCH
T ss_pred             eEEEECCCc
Confidence            999999873

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.82  E-value=0.00067  Score=58.74  Aligned_cols=74  Identities=14%  Similarity=0.127  Sum_probs=47.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC-HHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~D  147 (267)
                      .+|||+|+ |+||...++.+...  |++|+++++++.+    .+.++++   +.. ..  .|..+ .+.++++.+..++|
T Consensus       172 ~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~----~~~~~~l---Ga~-~v--i~~~~~~~~~~~~~~g~g~D  240 (344)
T 2h6e_A          172 PVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKH----RDFALEL---GAD-YV--SEMKDAESLINKLTDGLGAS  240 (344)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHH----HHHHHHH---TCS-EE--ECHHHHHHHHHHHHTTCCEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHH----HHHHHHh---CCC-EE--eccccchHHHHHhhcCCCcc
Confidence            89999999 99999999888888  9999998854322    2233333   111 11  23333 33344433323799


Q ss_pred             EEEEcccc
Q 024488          148 AVMHFAAV  155 (267)
Q Consensus       148 ~li~~Ag~  155 (267)
                      ++|+++|.
T Consensus       241 ~vid~~g~  248 (344)
T 2h6e_A          241 IAIDLVGT  248 (344)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999873

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.82  E-value=0.0088  Score=52.41  Aligned_cols=34  Identities=24%  Similarity=0.143  Sum_probs=30.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~  105 (267)
                      ++|+|.|+ |.+|...++.+...|++|++++++..
T Consensus       185 ~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~  218 (381)
T 3p2y_A          185 ASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPE  218 (381)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            89999996 99999999999999999999996543

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.82  E-value=0.00043  Score=59.58  Aligned_cols=33  Identities=36%  Similarity=0.411  Sum_probs=30.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      +|+|+||+|++|...++.+...|++|++++++.
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~  185 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNR  185 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSS
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            799999999999999998888899999998654

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.82  E-value=0.0012  Score=55.58  Aligned_cols=66  Identities=12%  Similarity=0.155  Sum_probs=44.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      ++++|.|+ ||.|++++..|.+.|+ +|+++.|+.   +++.+..++       +..+     +.+++.+ +   ..|+|
T Consensus       123 k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~---~ka~~La~~-------~~~~-----~~~~l~~-l---~~Div  182 (282)
T 3fbt_A          123 NICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNP---EKTSEIYGE-------FKVI-----SYDELSN-L---KGDVI  182 (282)
T ss_dssp             SEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCH---HHHHHHCTT-------SEEE-----EHHHHTT-C---CCSEE
T ss_pred             CEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCH---HHHHHHHHh-------cCcc-----cHHHHHh-c---cCCEE
Confidence            89999995 8999999999999998 899998643   232222211       2222     2334443 2   57999


Q ss_pred             EEccccC
Q 024488          150 MHFAAVA  156 (267)
Q Consensus       150 i~~Ag~~  156 (267)
                      ||+....
T Consensus       183 InaTp~G  189 (282)
T 3fbt_A          183 INCTPKG  189 (282)
T ss_dssp             EECSSTT
T ss_pred             EECCccC
Confidence            9987543

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.80  E-value=0.0036  Score=54.77  Aligned_cols=74  Identities=12%  Similarity=0.112  Sum_probs=48.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHH---HHHHHhhcCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---AVNKFFSENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~v~~~~~~~~~  146 (267)
                      +.+|+|+||+|++|...++.+...|++|+++. ++.    ..+.++++   +.. ..  .|..+.+   .+.++.. +++
T Consensus       165 g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~----~~~~~~~l---Ga~-~v--i~~~~~~~~~~v~~~t~-g~~  232 (371)
T 3gqv_A          165 PVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPH----NFDLAKSR---GAE-EV--FDYRAPNLAQTIRTYTK-NNL  232 (371)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGG----GHHHHHHT---TCS-EE--EETTSTTHHHHHHHHTT-TCC
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHH----HHHHHHHc---CCc-EE--EECCCchHHHHHHHHcc-CCc
Confidence            38999999999999999999889999998875 221    22333443   211 22  2333332   3333332 469


Q ss_pred             CEEEEcccc
Q 024488          147 DAVMHFAAV  155 (267)
Q Consensus       147 D~li~~Ag~  155 (267)
                      |++|.++|.
T Consensus       233 d~v~d~~g~  241 (371)
T 3gqv_A          233 RYALDCITN  241 (371)
T ss_dssp             CEEEESSCS
T ss_pred             cEEEECCCc
Confidence            999999884

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.80  E-value=0.0034  Score=54.61  Aligned_cols=73  Identities=16%  Similarity=0.179  Sum_probs=49.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      .+|+|+|+ |+||...++.+...|++|++++++..   +.....+++   +.. ..  .|..+.+.++++..  ++|++|
T Consensus       182 ~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~---~~~~~~~~l---Ga~-~v--i~~~~~~~~~~~~~--g~D~vi  249 (357)
T 2cf5_A          182 LRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNK---KREEALQDL---GAD-DY--VIGSDQAKMSELAD--SLDYVI  249 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTT---HHHHHHTTS---CCS-CE--EETTCHHHHHHSTT--TEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChH---HHHHHHHHc---CCc-ee--eccccHHHHHHhcC--CCCEEE
Confidence            79999995 99999999888888999999986432   221111132   211 11  34456666665543  799999


Q ss_pred             Ecccc
Q 024488          151 HFAAV  155 (267)
Q Consensus       151 ~~Ag~  155 (267)
                      +++|.
T Consensus       250 d~~g~  254 (357)
T 2cf5_A          250 DTVPV  254 (357)
T ss_dssp             ECCCS
T ss_pred             ECCCC
Confidence            99984

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.80  E-value=0.0017  Score=55.54  Aligned_cols=73  Identities=19%  Similarity=0.163  Sum_probs=49.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +.+|+|+||+|++|...++.+...|++|+++++.    ++ .+.++++.   .. .  ..|..+.+.+.+.+.  ++|++
T Consensus       153 g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~----~~-~~~~~~lG---a~-~--~i~~~~~~~~~~~~~--g~D~v  219 (321)
T 3tqh_A          153 GDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK----RN-HAFLKALG---AE-Q--CINYHEEDFLLAIST--PVDAV  219 (321)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH----HH-HHHHHHHT---CS-E--EEETTTSCHHHHCCS--CEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc----ch-HHHHHHcC---CC-E--EEeCCCcchhhhhcc--CCCEE
Confidence            3899999999999999999999999999988732    11 33344442   11 1  234444443444443  79999


Q ss_pred             EEcccc
Q 024488          150 MHFAAV  155 (267)
Q Consensus       150 i~~Ag~  155 (267)
                      |+++|.
T Consensus       220 ~d~~g~  225 (321)
T 3tqh_A          220 IDLVGG  225 (321)
T ss_dssp             EESSCH
T ss_pred             EECCCc
Confidence            999873

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.79  E-value=0.0018  Score=56.38  Aligned_cols=75  Identities=20%  Similarity=0.197  Sum_probs=48.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH--HHHHHHhhcCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA--KAVNKFFSENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~v~~~~~~~~~  146 (267)
                      +.+|+|+|| |++|...++.+... |++|++++++..    ..+.++++   +.. ..  .|..+.  +.+.++....++
T Consensus       187 g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~----~~~~~~~l---Ga~-~v--i~~~~~~~~~v~~~~~g~g~  255 (359)
T 1h2b_A          187 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEE----KLKLAERL---GAD-HV--VDARRDPVKQVMELTRGRGV  255 (359)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHH----HHHHHHHT---TCS-EE--EETTSCHHHHHHHHTTTCCE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHH----HHHHHHHh---CCC-EE--EeccchHHHHHHHHhCCCCC
Confidence            389999999 89999998888888 999999985432    22233333   211 12  244443  344444332379


Q ss_pred             CEEEEcccc
Q 024488          147 DAVMHFAAV  155 (267)
Q Consensus       147 D~li~~Ag~  155 (267)
                      |++|+++|.
T Consensus       256 Dvvid~~G~  264 (359)
T 1h2b_A          256 NVAMDFVGS  264 (359)
T ss_dssp             EEEEESSCC
T ss_pred             cEEEECCCC
Confidence            999999874

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.78  E-value=0.0013  Score=56.37  Aligned_cols=72  Identities=21%  Similarity=0.265  Sum_probs=45.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEE
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH  151 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li~  151 (267)
                      +|+|+||+|++|...++.+...|++|+++++++.+    .+.++++   +.... +  |..+.+.+++ +..+++|++|.
T Consensus       149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~----~~~~~~l---Ga~~v-i--~~~~~~~~~~-~~~~~~d~v~d  217 (324)
T 3nx4_A          149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGREST----HGYLKSL---GANRI-L--SRDEFAESRP-LEKQLWAGAID  217 (324)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG----HHHHHHH---TCSEE-E--EGGGSSCCCS-SCCCCEEEEEE
T ss_pred             eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHhc---CCCEE-E--ecCCHHHHHh-hcCCCccEEEE
Confidence            39999999999999999998999999999864432    2333333   21211 1  2222111111 12247899999


Q ss_pred             ccc
Q 024488          152 FAA  154 (267)
Q Consensus       152 ~Ag  154 (267)
                      ++|
T Consensus       218 ~~g  220 (324)
T 3nx4_A          218 TVG  220 (324)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            886

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.77  E-value=0.0023  Score=56.64  Aligned_cols=75  Identities=20%  Similarity=0.224  Sum_probs=48.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH---HHHHHHhhcCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENA  145 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~  145 (267)
                      +.+|||+|+ |++|...++.+...|+ +|+++++++.    ..+.++++   +.. ..  .|..+.   +.+.++....+
T Consensus       214 g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~----~~~~~~~l---Ga~-~v--i~~~~~~~~~~i~~~t~g~g  282 (404)
T 3ip1_A          214 GDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEV----RRNLAKEL---GAD-HV--IDPTKENFVEAVLDYTNGLG  282 (404)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHH----HHHHHHHH---TCS-EE--ECTTTSCHHHHHHHHTTTCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH----HHHHHHHc---CCC-EE--EcCCCCCHHHHHHHHhCCCC
Confidence            389999998 9999999888888999 8988875332    22333444   211 12  233332   33444443347


Q ss_pred             CCEEEEcccc
Q 024488          146 FDAVMHFAAV  155 (267)
Q Consensus       146 ~D~li~~Ag~  155 (267)
                      +|++|.++|.
T Consensus       283 ~D~vid~~g~  292 (404)
T 3ip1_A          283 AKLFLEATGV  292 (404)
T ss_dssp             CSEEEECSSC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.76  E-value=0.0017  Score=57.58  Aligned_cols=70  Identities=21%  Similarity=0.264  Sum_probs=47.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +++|+|.|+ |++|+.+++.|...|+ +|++++|+.   +++.+..+++   +  ...  .+.   +++.+++.  +.|+
T Consensus       167 g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~---~ra~~la~~~---g--~~~--~~~---~~l~~~l~--~aDv  230 (404)
T 1gpj_A          167 DKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTY---ERAVELARDL---G--GEA--VRF---DELVDHLA--RSDV  230 (404)
T ss_dssp             TCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSH---HHHHHHHHHH---T--CEE--CCG---GGHHHHHH--TCSE
T ss_pred             CCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCH---HHHHHHHHHc---C--Cce--ecH---HhHHHHhc--CCCE
Confidence            489999997 9999999999999998 899988643   2222222332   1  121  222   34455555  7899


Q ss_pred             EEEcccc
Q 024488          149 VMHFAAV  155 (267)
Q Consensus       149 li~~Ag~  155 (267)
                      ||++.+.
T Consensus       231 Vi~at~~  237 (404)
T 1gpj_A          231 VVSATAA  237 (404)
T ss_dssp             EEECCSS
T ss_pred             EEEccCC
Confidence            9999764

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.76  E-value=0.00098  Score=58.59  Aligned_cols=75  Identities=11%  Similarity=0.103  Sum_probs=49.3

Q ss_pred             cEEEEEc-CCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 024488           71 THVLVTG-GAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (267)
Q Consensus        71 k~vlVTG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~  146 (267)
                      .+|+|.| |+|++|...++.+...|++|+++++++.    ..+.++++   +... .+  |..+.   +.+.++....++
T Consensus       172 ~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~----~~~~~~~l---Ga~~-~~--~~~~~~~~~~v~~~t~~~g~  241 (379)
T 3iup_A          172 HSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQE----QADLLKAQ---GAVH-VC--NAASPTFMQDLTEALVSTGA  241 (379)
T ss_dssp             CSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHH----HHHHHHHT---TCSC-EE--ETTSTTHHHHHHHHHHHHCC
T ss_pred             CEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHhC---CCcE-EE--eCCChHHHHHHHHHhcCCCc
Confidence            6889987 9999999999888888999999985432    22333343   2121 22  33332   344444433479


Q ss_pred             CEEEEcccc
Q 024488          147 DAVMHFAAV  155 (267)
Q Consensus       147 D~li~~Ag~  155 (267)
                      |++|+++|.
T Consensus       242 d~v~d~~g~  250 (379)
T 3iup_A          242 TIAFDATGG  250 (379)
T ss_dssp             CEEEESCEE
T ss_pred             eEEEECCCc
Confidence            999999984

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.74  E-value=0.0011  Score=57.79  Aligned_cols=79  Identities=11%  Similarity=0.059  Sum_probs=47.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH--HHHHHHhhc-CCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA--KAVNKFFSE-NAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~v~~~~~~-~~~  146 (267)
                      +.+|||+||+|++|...++.+...|++|+++.+...+.++..+.++++   +.. ..+  |..+.  +++.++... +++
T Consensus       168 g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~l---Ga~-~vi--~~~~~~~~~~~~~~~~~~~~  241 (357)
T 1zsy_A          168 GDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSL---GAE-HVI--TEEELRRPEMKNFFKDMPQP  241 (357)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHT---TCS-EEE--EHHHHHSGGGGGTTSSSCCC
T ss_pred             CCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhc---CCc-EEE--ecCcchHHHHHHHHhCCCCc
Confidence            389999999999999988877778999988875332222222334443   211 122  21111  122333322 258


Q ss_pred             CEEEEccc
Q 024488          147 DAVMHFAA  154 (267)
Q Consensus       147 D~li~~Ag  154 (267)
                      |++|.++|
T Consensus       242 Dvvid~~g  249 (357)
T 1zsy_A          242 RLALNCVG  249 (357)
T ss_dssp             SEEEESSC
T ss_pred             eEEEECCC
Confidence            99999987

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.72  E-value=0.0067  Score=50.71  Aligned_cols=36  Identities=28%  Similarity=0.421  Sum_probs=31.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG  106 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~  106 (267)
                      .++++|.|+ ||.|++++..|++.|.+|+++.|+..+
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~k  153 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRG  153 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            389999995 999999999999999999999875443

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.72  E-value=0.011  Score=50.49  Aligned_cols=114  Identities=11%  Similarity=0.118  Sum_probs=70.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcC-CCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|.|+|| |.+|..++..|+..|. +|++.|+.....+.....+.+.. .......+...  +|.    +.++  +.|+|
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~----~a~~--~aD~V   71 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NSY----EDMR--GSDIV   71 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SCG----GGGT--TCSEE
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CCH----HHhC--CCCEE
Confidence            4789998 9999999999988887 69999965332222112222110 00112222221  222    2344  78999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEec
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSST  196 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vSS  196 (267)
                      |..||....  ......+....|....+.+.+.+.+... ..+|++|-
T Consensus        72 i~~ag~~~k--~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  117 (308)
T 2d4a_B           72 LVTAGIGRK--PGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN  117 (308)
T ss_dssp             EECCSCCCC--SSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             EEeCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            999987532  2334456677888888888888887653 46666643

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=96.68  E-value=0.0077  Score=52.66  Aligned_cols=69  Identities=20%  Similarity=0.282  Sum_probs=51.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      ||+|+|+|+ |.+|+.+++.+.+.|++|++++......  ..    ..   .  -..+..|..|.+.+.++++  ++|.|
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~--~~----~~---~--~~~~~~~~~d~~~l~~~~~--~~d~v   66 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSP--AG----QV---A--DEQIVAGFFDSERIEDLVK--GSDVT   66 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCT--TG----GG---S--SEEEECCTTCHHHHHHHHH--TCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCc--hh----hh---C--ceEEECCCCCHHHHHHHHh--cCCEE
Confidence            589999996 7899999999999999999998533221  11    11   0  1245688999999998885  78998


Q ss_pred             EEc
Q 024488          150 MHF  152 (267)
Q Consensus       150 i~~  152 (267)
                      +..
T Consensus        67 ~~~   69 (380)
T 3ax6_A           67 TYD   69 (380)
T ss_dssp             EES
T ss_pred             Eec
Confidence            763

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.67  E-value=0.0069  Score=53.51  Aligned_cols=74  Identities=19%  Similarity=0.241  Sum_probs=49.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEcc----------------CCCH
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD----------------LGDA  134 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D----------------l~d~  134 (267)
                      .+|+|.|+ |-+|...++.+...|++|++++++....+.    ++++   +  ..++..+                +++.
T Consensus       191 ~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~----~~~~---G--~~~~~~~~~~~~d~~~~~~ya~e~s~~  260 (405)
T 4dio_A          191 AKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQ----VASL---G--AKFIAVEDEEFKAAETAGGYAKEMSGE  260 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHH----HHHT---T--CEECCCCC-----------------CH
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHH----HHHc---C--Cceeecccccccccccccchhhhcchh
Confidence            78999996 999999999999999999999965432222    2222   1  1122111                2332


Q ss_pred             ------HHHHHHhhcCCCCEEEEccccC
Q 024488          135 ------KAVNKFFSENAFDAVMHFAAVA  156 (267)
Q Consensus       135 ------~~v~~~~~~~~~D~li~~Ag~~  156 (267)
                            +.+.++++  +.|+||+++.+.
T Consensus       261 ~~~~~~~~l~e~l~--~aDVVI~tvlip  286 (405)
T 4dio_A          261 YQVKQAALVAEHIA--KQDIVITTALIP  286 (405)
T ss_dssp             HHHHHHHHHHHHHH--TCSEEEECCCCS
T ss_pred             hhhhhHhHHHHHhc--CCCEEEECCcCC
Confidence                  46677777  789999988654

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.67  E-value=0.0022  Score=55.53  Aligned_cols=68  Identities=21%  Similarity=0.161  Sum_probs=46.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +.+|||+|+ |+||...++.+...|++|+++++++.+.+    .++++   +... .+    .+.+.+    .+ ++|++
T Consensus       177 g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~----~~~~l---Ga~~-v~----~~~~~~----~~-~~D~v  238 (348)
T 3two_A          177 GTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQ----DALSM---GVKH-FY----TDPKQC----KE-ELDFI  238 (348)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHH----HHHHT---TCSE-EE----SSGGGC----CS-CEEEE
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHH----HHHhc---CCCe-ec----CCHHHH----hc-CCCEE
Confidence            389999997 99999999888889999999986544332    23333   2222 22    333322    22 78999


Q ss_pred             EEcccc
Q 024488          150 MHFAAV  155 (267)
Q Consensus       150 i~~Ag~  155 (267)
                      |+++|.
T Consensus       239 id~~g~  244 (348)
T 3two_A          239 ISTIPT  244 (348)
T ss_dssp             EECCCS
T ss_pred             EECCCc
Confidence            999874

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.66  E-value=0.0025  Score=54.91  Aligned_cols=69  Identities=14%  Similarity=0.141  Sum_probs=53.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHH-hhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~-~~~~~~D~l  149 (267)
                      ++++|.|+ |.+|+.++++|.++|+ |+++++++   +.. + +++     ..+.++.+|.+|++.++++ ++  +.|.+
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~---~~~-~-~~~-----~~~~~i~gd~~~~~~L~~a~i~--~a~~v  181 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDEN---VRK-K-VLR-----SGANFVHGDPTRVSDLEKANVR--GARAV  181 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGG---GHH-H-HHH-----TTCEEEESCTTSHHHHHHTCST--TEEEE
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCCh---hhh-h-HHh-----CCcEEEEeCCCCHHHHHhcChh--hccEE
Confidence            68999995 9999999999999999 99988533   222 2 222     2578899999999998876 44  67888


Q ss_pred             EEcc
Q 024488          150 MHFA  153 (267)
Q Consensus       150 i~~A  153 (267)
                      |-..
T Consensus       182 i~~~  185 (336)
T 1lnq_A          182 IVDL  185 (336)
T ss_dssp             EECC
T ss_pred             EEcC
Confidence            8654

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=96.65  E-value=0.0086  Score=50.99  Aligned_cols=115  Identities=14%  Similarity=0.113  Sum_probs=64.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcC-CCCCceEEEEccCCCHHHHHHHhhcCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (267)
                      |++|.|.| +|.+|..++..|++.|  ++|++++++....+.....+.... ..+..+.....   |.    +.++  +.
T Consensus         1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---d~----~~~~--~a   70 (309)
T 1hyh_A            1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---DW----AALA--DA   70 (309)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---CG----GGGT--TC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeC---CH----HHhC--CC
Confidence            46899999 8999999999999999  799999964322222221111110 01112332222   32    2344  78


Q ss_pred             CEEEEccccCCcC-C-CccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEE
Q 024488          147 DAVMHFAAVAYVG-E-STLDPLKYYHNITSNTLVVLESMARHGV-DTLIYS  194 (267)
Q Consensus       147 D~li~~Ag~~~~~-~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~v  194 (267)
                      |+||-+++..... . ......+....|......+++.+.+... ..||++
T Consensus        71 DvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~  121 (309)
T 1hyh_A           71 DVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVI  121 (309)
T ss_dssp             SEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             CEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEE
Confidence            9999998764310 0 0112233455666667777777776543 344443

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.63  E-value=0.0055  Score=53.97  Aligned_cols=35  Identities=26%  Similarity=0.190  Sum_probs=30.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~  105 (267)
                      +++|+|+| .|.+|+.+++.+...|++|++++++..
T Consensus       172 g~~V~ViG-aG~iG~~aa~~a~~~Ga~V~~~d~~~~  206 (384)
T 1l7d_A          172 PARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAA  206 (384)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            38999999 599999999999999999999986543

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.62  E-value=0.0031  Score=54.40  Aligned_cols=74  Identities=18%  Similarity=0.135  Sum_probs=47.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhh-cCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS-ENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~-~~~~D~  148 (267)
                      +++|||+|+ |++|...++.+...|++|+++++++.+    .+.++++   +... .  .|..+.+..+.+.+ .+++|+
T Consensus       167 g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~----~~~~~~l---Ga~~-~--i~~~~~~~~~~~~~~~g~~d~  235 (340)
T 3s2e_A          167 GQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAK----LNLARRL---GAEV-A--VNARDTDPAAWLQKEIGGAHG  235 (340)
T ss_dssp             TSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHH----HHHHHHT---TCSE-E--EETTTSCHHHHHHHHHSSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHH----HHHHHHc---CCCE-E--EeCCCcCHHHHHHHhCCCCCE
Confidence            389999996 899999998888899999999864322    2233333   2222 2  23333222222221 247899


Q ss_pred             EEEccc
Q 024488          149 VMHFAA  154 (267)
Q Consensus       149 li~~Ag  154 (267)
                      +|.++|
T Consensus       236 vid~~g  241 (340)
T 3s2e_A          236 VLVTAV  241 (340)
T ss_dssp             EEESSC
T ss_pred             EEEeCC
Confidence            999986

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=96.61  E-value=0.017  Score=50.67  Aligned_cols=68  Identities=21%  Similarity=0.270  Sum_probs=50.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      .+|+|+|.| +|.+|+.+++.+.+.|++|++++......  ..+    .     .-..+..|..|.+.+.++++  .+|+
T Consensus        13 ~~k~IlIlG-~G~~g~~la~aa~~~G~~vi~~d~~~~~~--~~~----~-----ad~~~~~~~~d~~~l~~~~~--~~dv   78 (389)
T 3q2o_A           13 PGKTIGIIG-GGQLGRMMALAAKEMGYKIAVLDPTKNSP--CAQ----V-----ADIEIVASYDDLKAIQHLAE--ISDV   78 (389)
T ss_dssp             TTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSTTCT--TTT----T-----CSEEEECCTTCHHHHHHHHH--TCSE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEeCCCCCc--hHH----h-----CCceEecCcCCHHHHHHHHH--hCCE
Confidence            348999998 57899999999999999999998543221  100    0     11345678899999999988  6788


Q ss_pred             EE
Q 024488          149 VM  150 (267)
Q Consensus       149 li  150 (267)
                      +.
T Consensus        79 I~   80 (389)
T 3q2o_A           79 VT   80 (389)
T ss_dssp             EE
T ss_pred             ee
Confidence            74

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=96.61  E-value=0.0068  Score=52.72  Aligned_cols=99  Identities=18%  Similarity=0.179  Sum_probs=57.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-----C-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS-----Y-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G-----~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~  143 (267)
                      |++|.|.||||.+|+++++.|.+++     . +++.+.+.....+...+....+.. ...+.+.  |+ +.++    +. 
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~-~~~~~~~--~~-~~~~----~~-   79 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTP-LAHRVVE--PT-EAAV----LG-   79 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGG-GTTCBCE--EC-CHHH----HT-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccc-cceeeec--cC-CHHH----hc-
Confidence            4789999999999999999999887     3 677765321111111111111100 0122221  22 3332    33 


Q ss_pred             CCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccc
Q 024488          144 NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA  198 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~  198 (267)
                       ++|++|.++|...                  +..+++.+ +.+ .++|-.|+..
T Consensus        80 -~~DvVf~alg~~~------------------s~~~~~~~-~~G-~~vIDlSa~~  113 (352)
T 2nqt_A           80 -GHDAVFLALPHGH------------------SAVLAQQL-SPE-TLIIDCGADF  113 (352)
T ss_dssp             -TCSEEEECCTTSC------------------CHHHHHHS-CTT-SEEEECSSTT
T ss_pred             -CCCEEEECCCCcc------------------hHHHHHHH-hCC-CEEEEECCCc
Confidence             7899999987431                  23456667 555 5788888754

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.61  E-value=0.0063  Score=52.06  Aligned_cols=79  Identities=15%  Similarity=-0.019  Sum_probs=52.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceE-EEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQ-FIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +++|+|.|++.-+|+.+|+.|+..|++|++++|+....   .+..+++.   ...+ ......++++++++.+.  ..|+
T Consensus       177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l---~~ra~~la---~~~~~~t~~~~t~~~~L~e~l~--~ADI  248 (320)
T 1edz_A          177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQK---FTRGESLK---LNKHHVEDLGEYSEDLLKKCSL--DSDV  248 (320)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEE---EESCCCSS---CCCCEEEEEEECCHHHHHHHHH--HCSE
T ss_pred             CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHH---HhHHHHHh---hhcccccccccccHhHHHHHhc--cCCE
Confidence            39999999888889999999999999999998642111   11111111   1111 11112244577888887  6799


Q ss_pred             EEEccccC
Q 024488          149 VMHFAAVA  156 (267)
Q Consensus       149 li~~Ag~~  156 (267)
                      ||...|..
T Consensus       249 VIsAtg~p  256 (320)
T 1edz_A          249 VITGVPSE  256 (320)
T ss_dssp             EEECCCCT
T ss_pred             EEECCCCC
Confidence            99988864

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.60  E-value=0.004  Score=54.97  Aligned_cols=74  Identities=20%  Similarity=0.285  Sum_probs=48.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC----HHHHHHHhhcC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD----AKAVNKFFSEN  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d----~~~v~~~~~~~  144 (267)
                      +.+|+|+|+ |+||...++.+...|+ +|++++++..+    .+.++++   +  +..+  |..+    .+.+.++....
T Consensus       186 g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~----~~~a~~l---G--a~~i--~~~~~~~~~~~~~~~~~g~  253 (398)
T 2dph_A          186 GSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPER----LKLLSDA---G--FETI--DLRNSAPLRDQIDQILGKP  253 (398)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHH----HHHHHTT---T--CEEE--ETTSSSCHHHHHHHHHSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHH----HHHHHHc---C--CcEE--cCCCcchHHHHHHHHhCCC
Confidence            389999996 9999998888777899 89999854322    2223333   2  2333  4333    34455544333


Q ss_pred             CCCEEEEcccc
Q 024488          145 AFDAVMHFAAV  155 (267)
Q Consensus       145 ~~D~li~~Ag~  155 (267)
                      ++|++|.++|.
T Consensus       254 g~Dvvid~~g~  264 (398)
T 2dph_A          254 EVDCGVDAVGF  264 (398)
T ss_dssp             CEEEEEECSCT
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.58  E-value=0.0023  Score=53.08  Aligned_cols=66  Identities=15%  Similarity=0.196  Sum_probs=44.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      +++|.|+ |+.|++++..|++.|+ +|++++|+.   +++.+..+       ++...  +.   +++.+.++  +.|+||
T Consensus       110 ~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~---~ka~~la~-------~~~~~--~~---~~~~~~~~--~aDiVI  171 (253)
T 3u62_A          110 PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTI---ERAKALDF-------PVKIF--SL---DQLDEVVK--KAKSLF  171 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCH---HHHHTCCS-------SCEEE--EG---GGHHHHHH--TCSEEE
T ss_pred             eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCH---HHHHHHHH-------HcccC--CH---HHHHhhhc--CCCEEE
Confidence            7899995 9999999999999998 899998643   22222111       11112  12   33445555  689999


Q ss_pred             Ecccc
Q 024488          151 HFAAV  155 (267)
Q Consensus       151 ~~Ag~  155 (267)
                      |+...
T Consensus       172 natp~  176 (253)
T 3u62_A          172 NTTSV  176 (253)
T ss_dssp             ECSST
T ss_pred             ECCCC
Confidence            98654

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.56  E-value=0.0068  Score=53.69  Aligned_cols=34  Identities=24%  Similarity=0.140  Sum_probs=30.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      +++|+|+|+ |.+|..+++.+...|++|++++++.
T Consensus       172 g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~  205 (401)
T 1x13_A          172 PAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRP  205 (401)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            389999995 9999999999999999999998644

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.55  E-value=0.0082  Score=52.42  Aligned_cols=73  Identities=16%  Similarity=0.183  Sum_probs=47.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC----H-HHHHHHhhcC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD----A-KAVNKFFSEN  144 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d----~-~~v~~~~~~~  144 (267)
                      ++|||+|+ |++|...++.+...|+ +|+++++++.+.    +.++++   +.. ..  .|..+    . +.+.++.. +
T Consensus       194 ~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~----~~~~~l---Ga~-~v--i~~~~~~~~~~~~~~~~~~-~  261 (374)
T 1cdo_A          194 STCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKF----EKAKVF---GAT-DF--VNPNDHSEPISQVLSKMTN-G  261 (374)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH----HHHHHT---TCC-EE--ECGGGCSSCHHHHHHHHHT-S
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHH----HHHHHh---CCc-eE--EeccccchhHHHHHHHHhC-C
Confidence            89999995 9999999988888999 798888543222    223333   211 11  23332    2 23333333 4


Q ss_pred             CCCEEEEcccc
Q 024488          145 AFDAVMHFAAV  155 (267)
Q Consensus       145 ~~D~li~~Ag~  155 (267)
                      ++|++|+++|.
T Consensus       262 g~D~vid~~g~  272 (374)
T 1cdo_A          262 GVDFSLECVGN  272 (374)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.55  E-value=0.0039  Score=54.66  Aligned_cols=73  Identities=14%  Similarity=0.119  Sum_probs=47.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCC----C-HHHHHHHhhcC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG----D-AKAVNKFFSEN  144 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----d-~~~v~~~~~~~  144 (267)
                      .+|+|+|+ |+||...++.+...|+ +|+++++++.+.    +.++++   +... .  .|..    + .+.+.++.. +
T Consensus       195 ~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~----~~a~~l---Ga~~-v--i~~~~~~~~~~~~i~~~~~-g  262 (378)
T 3uko_A          195 SNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKY----ETAKKF---GVNE-F--VNPKDHDKPIQEVIVDLTD-G  262 (378)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHH----HHHHTT---TCCE-E--ECGGGCSSCHHHHHHHHTT-S
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH----HHHHHc---CCcE-E--EccccCchhHHHHHHHhcC-C
Confidence            78999997 9999999888888899 899988544322    233333   2111 2  2322    2 233444443 4


Q ss_pred             CCCEEEEcccc
Q 024488          145 AFDAVMHFAAV  155 (267)
Q Consensus       145 ~~D~li~~Ag~  155 (267)
                      ++|++|.++|.
T Consensus       263 g~D~vid~~g~  273 (378)
T 3uko_A          263 GVDYSFECIGN  273 (378)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            89999999884

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.54  E-value=0.0019  Score=56.72  Aligned_cols=74  Identities=14%  Similarity=0.175  Sum_probs=47.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCC--CHHHHHHHhh----c
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG--DAKAVNKFFS----E  143 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--d~~~v~~~~~----~  143 (267)
                      ++|||+| +|++|...++.+...| ++|++++++..+    .+.++++   +.. ..+  |..  +.+++.+.+.    .
T Consensus       197 ~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~----~~~~~~l---Ga~-~vi--~~~~~~~~~~~~~v~~~~~g  265 (380)
T 1vj0_A          197 KTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNR----LKLAEEI---GAD-LTL--NRRETSVEERRKAIMDITHG  265 (380)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHH----HHHHHHT---TCS-EEE--ETTTSCHHHHHHHHHHHTTT
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHH----HHHHHHc---CCc-EEE--eccccCcchHHHHHHHHhCC
Confidence            8999999 8999999999888899 699999854322    2233333   211 222  333  1333333222    2


Q ss_pred             CCCCEEEEcccc
Q 024488          144 NAFDAVMHFAAV  155 (267)
Q Consensus       144 ~~~D~li~~Ag~  155 (267)
                      .++|++|+++|.
T Consensus       266 ~g~Dvvid~~g~  277 (380)
T 1vj0_A          266 RGADFILEATGD  277 (380)
T ss_dssp             SCEEEEEECSSC
T ss_pred             CCCcEEEECCCC
Confidence            369999999984

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=96.53  E-value=0.013  Score=50.80  Aligned_cols=97  Identities=14%  Similarity=0.087  Sum_probs=56.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      |++|.|.||+|.+|+.+++.|.+... +++.+.+......+..+....+... ..     .++.+.+   + +.  ++|+
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~-~~-----~~~~~~~---~-~~--~vDv   71 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGR-TN-----LKFVPPE---K-LE--PADI   71 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTT-CC-----CBCBCGG---G-CC--CCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCc-cc-----ccccchh---H-hc--CCCE
Confidence            47899999999999999999998754 7777664222211121111111000 01     1222322   2 33  7999


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEecc
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTC  197 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~  197 (267)
                      ||-+++..                  ....+.+.+.+.+ .++|-.|+.
T Consensus        72 V~~a~g~~------------------~s~~~a~~~~~aG-~~VId~Sa~  101 (345)
T 2ozp_A           72 LVLALPHG------------------VFAREFDRYSALA-PVLVDLSAD  101 (345)
T ss_dssp             EEECCCTT------------------HHHHTHHHHHTTC-SEEEECSST
T ss_pred             EEEcCCcH------------------HHHHHHHHHHHCC-CEEEEcCcc
Confidence            99998642                  1234455555555 467878774

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.43  E-value=0.0083  Score=52.45  Aligned_cols=74  Identities=14%  Similarity=0.148  Sum_probs=47.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC-----HHHHHHHhhc
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-----AKAVNKFFSE  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-----~~~v~~~~~~  143 (267)
                      +.+|+|+|+ |+||...++.+...|+ +|+++++++.+    .+.++++   +.. ..  .|..+     .+.+.++.. 
T Consensus       196 g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~----~~~a~~l---Ga~-~v--i~~~~~~~~~~~~v~~~~~-  263 (376)
T 1e3i_A          196 GSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEK----FPKAKAL---GAT-DC--LNPRELDKPVQDVITELTA-  263 (376)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGG----HHHHHHT---TCS-EE--ECGGGCSSCHHHHHHHHHT-
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHH----HHHHHHh---CCc-EE--EccccccchHHHHHHHHhC-
Confidence            389999995 9999999988888999 79888854322    2223333   211 11  23322     223444333 


Q ss_pred             CCCCEEEEcccc
Q 024488          144 NAFDAVMHFAAV  155 (267)
Q Consensus       144 ~~~D~li~~Ag~  155 (267)
                      +++|++|+++|.
T Consensus       264 ~g~Dvvid~~G~  275 (376)
T 1e3i_A          264 GGVDYSLDCAGT  275 (376)
T ss_dssp             SCBSEEEESSCC
T ss_pred             CCccEEEECCCC
Confidence            479999999874

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.41  E-value=0.0079  Score=51.89  Aligned_cols=32  Identities=38%  Similarity=0.498  Sum_probs=28.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNL  103 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~  103 (267)
                      ++|+|.| .||+|.++++.|+..|. +++++|+.
T Consensus        35 ~~VlIvG-aGGlGs~va~~La~aGVg~ItlvD~D   67 (340)
T 3rui_A           35 TKVLLLG-AGTLGCYVSRALIAWGVRKITFVDNG   67 (340)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEecCC
Confidence            8999999 69999999999999996 78888764

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.40  E-value=0.0083  Score=52.87  Aligned_cols=75  Identities=20%  Similarity=0.177  Sum_probs=48.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC----HHHHHHHhhcC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD----AKAVNKFFSEN  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d----~~~v~~~~~~~  144 (267)
                      +.+|+|.| +|++|...++.+...|+ +|++++++..    ..+.++++   +  +..  .|..+    .+.+.++....
T Consensus       186 g~~VlV~G-aG~vG~~aiqlAk~~Ga~~Vi~~~~~~~----~~~~a~~l---G--a~~--i~~~~~~~~~~~v~~~t~g~  253 (398)
T 1kol_A          186 GSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPA----RLAHAKAQ---G--FEI--ADLSLDTPLHEQIAALLGEP  253 (398)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHH----HHHHHHHT---T--CEE--EETTSSSCHHHHHHHHHSSS
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHHCCCCeEEEEcCCHH----HHHHHHHc---C--CcE--EccCCcchHHHHHHHHhCCC
Confidence            38999999 59999998888888898 6888875332    22333443   2  222  34332    23444444334


Q ss_pred             CCCEEEEccccC
Q 024488          145 AFDAVMHFAAVA  156 (267)
Q Consensus       145 ~~D~li~~Ag~~  156 (267)
                      ++|++|.++|..
T Consensus       254 g~Dvvid~~G~~  265 (398)
T 1kol_A          254 EVDCAVDAVGFE  265 (398)
T ss_dssp             CEEEEEECCCTT
T ss_pred             CCCEEEECCCCc
Confidence            799999999853

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.39  E-value=0.0039  Score=54.57  Aligned_cols=74  Identities=19%  Similarity=0.233  Sum_probs=47.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhh-----cC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS-----EN  144 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~-----~~  144 (267)
                      .+|||+|+ |++|...++.+...|+ +|+++++++    +..+.++++   +.. .  ..|..+.+..+.+.+     .+
T Consensus       184 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~----~~~~~a~~l---Ga~-~--vi~~~~~~~~~~i~~~~~~~~g  252 (370)
T 4ej6_A          184 STVAILGG-GVIGLLTVQLARLAGATTVILSTRQA----TKRRLAEEV---GAT-A--TVDPSAGDVVEAIAGPVGLVPG  252 (370)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCH----HHHHHHHHH---TCS-E--EECTTSSCHHHHHHSTTSSSTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH----HHHHHHHHc---CCC-E--EECCCCcCHHHHHHhhhhccCC
Confidence            89999997 9999999988888999 888877432    222333443   111 1  234444333333322     24


Q ss_pred             CCCEEEEcccc
Q 024488          145 AFDAVMHFAAV  155 (267)
Q Consensus       145 ~~D~li~~Ag~  155 (267)
                      ++|++|+++|.
T Consensus       253 g~Dvvid~~G~  263 (370)
T 4ej6_A          253 GVDVVIECAGV  263 (370)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.39  E-value=0.0086  Score=52.30  Aligned_cols=73  Identities=14%  Similarity=0.119  Sum_probs=46.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC-----HHHHHHHhhcC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-----AKAVNKFFSEN  144 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-----~~~v~~~~~~~  144 (267)
                      ++|||+| +|+||...++.+...|+ +|+++++++.+.    +.++++   +.. ..  .|..+     .+.+.++.. +
T Consensus       193 ~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~----~~~~~l---Ga~-~v--i~~~~~~~~~~~~~~~~~~-~  260 (374)
T 2jhf_A          193 STCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKF----AKAKEV---GAT-EC--VNPQDYKKPIQEVLTEMSN-G  260 (374)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGH----HHHHHT---TCS-EE--ECGGGCSSCHHHHHHHHTT-S
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHH----HHHHHh---CCc-eE--ecccccchhHHHHHHHHhC-C
Confidence            8999999 59999999988888999 798888543322    223333   211 12  23322     223333333 4


Q ss_pred             CCCEEEEcccc
Q 024488          145 AFDAVMHFAAV  155 (267)
Q Consensus       145 ~~D~li~~Ag~  155 (267)
                      ++|++|+++|.
T Consensus       261 g~D~vid~~g~  271 (374)
T 2jhf_A          261 GVDFSFEVIGR  271 (374)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCcEEEECCCC
Confidence            79999999974

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.38  E-value=0.0069  Score=52.88  Aligned_cols=73  Identities=14%  Similarity=0.065  Sum_probs=46.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC-----HHHHHHHhhcC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-----AKAVNKFFSEN  144 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-----~~~v~~~~~~~  144 (267)
                      .+|||+|+ |++|...++.+...|+ +|+++++++.+.    +.++++   +.. ..  .|..+     .+.+.++.. +
T Consensus       192 ~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~----~~~~~l---Ga~-~v--i~~~~~~~~~~~~v~~~~~-~  259 (373)
T 2fzw_A          192 SVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKF----ARAKEF---GAT-EC--INPQDFSKPIQEVLIEMTD-G  259 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH----HHHHHH---TCS-EE--ECGGGCSSCHHHHHHHHTT-S
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH----HHHHHc---CCc-eE--eccccccccHHHHHHHHhC-C
Confidence            89999995 9999999988888898 798888543322    223333   111 11  23322     223444333 4


Q ss_pred             CCCEEEEcccc
Q 024488          145 AFDAVMHFAAV  155 (267)
Q Consensus       145 ~~D~li~~Ag~  155 (267)
                      ++|++|+++|.
T Consensus       260 g~D~vid~~g~  270 (373)
T 2fzw_A          260 GVDYSFECIGN  270 (373)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.38  E-value=0.0037  Score=54.19  Aligned_cols=74  Identities=15%  Similarity=0.094  Sum_probs=47.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~  146 (267)
                      .+|+|+|+ |+||...++.+...|+ +|++++++.    +..+.++++.   .. ..  .|..+.   +.+.++....++
T Consensus       168 ~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~----~~~~~~~~lG---a~-~v--i~~~~~~~~~~v~~~t~g~g~  236 (352)
T 3fpc_A          168 DTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRK----HCCDIALEYG---AT-DI--INYKNGDIVEQILKATDGKGV  236 (352)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCH----HHHHHHHHHT---CC-EE--ECGGGSCHHHHHHHHTTTCCE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCH----HHHHHHHHhC---Cc-eE--EcCCCcCHHHHHHHHcCCCCC
Confidence            78999985 9999999888888899 799887432    2223334442   11 12  232222   334444433479


Q ss_pred             CEEEEcccc
Q 024488          147 DAVMHFAAV  155 (267)
Q Consensus       147 D~li~~Ag~  155 (267)
                      |++|+++|.
T Consensus       237 D~v~d~~g~  245 (352)
T 3fpc_A          237 DKVVIAGGD  245 (352)
T ss_dssp             EEEEECSSC
T ss_pred             CEEEECCCC
Confidence            999999874

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=96.37  E-value=0.014  Score=50.28  Aligned_cols=76  Identities=17%  Similarity=0.121  Sum_probs=46.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeE-EEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHH-HHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKA-VNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-v~~~~~~~~~D~  148 (267)
                      ++|+|+|+ |++|...+..+...|+.+ +++++++    +..+.++++   +.. +.+..+-.+..+ ++.+-+..++|+
T Consensus       162 ~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~----~k~~~a~~l---Ga~-~~i~~~~~~~~~~~~~~~~~~g~d~  232 (346)
T 4a2c_A          162 KNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISS----EKLALAKSF---GAM-QTFNSSEMSAPQMQSVLRELRFNQL  232 (346)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCH----HHHHHHHHT---TCS-EEEETTTSCHHHHHHHHGGGCSSEE
T ss_pred             CEEEEECC-CCcchHHHHHHHHcCCcEEEEEechH----HHHHHHHHc---CCe-EEEeCCCCCHHHHHHhhcccCCccc
Confidence            89999986 999999998888899876 4555322    223334444   222 223222223333 333333367899


Q ss_pred             EEEcccc
Q 024488          149 VMHFAAV  155 (267)
Q Consensus       149 li~~Ag~  155 (267)
                      ++.++|.
T Consensus       233 v~d~~G~  239 (346)
T 4a2c_A          233 ILETAGV  239 (346)
T ss_dssp             EEECSCS
T ss_pred             ccccccc
Confidence            9998873

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.37  E-value=0.005  Score=53.45  Aligned_cols=75  Identities=16%  Similarity=0.160  Sum_probs=46.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCC--C-HHHHHHHhhc--
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG--D-AKAVNKFFSE--  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--d-~~~v~~~~~~--  143 (267)
                      +.+|+|+|+ |++|...++.+...|+ +|++++++..    ..+.++++   +.. ..  .|..  + .+..+++.+.  
T Consensus       172 g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~----~~~~a~~l---Ga~-~v--i~~~~~~~~~~~~~i~~~~~  240 (356)
T 1pl8_A          172 GHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSAT----RLSKAKEI---GAD-LV--LQISKESPQEIARKVEGQLG  240 (356)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHH----HHHHHHHT---TCS-EE--EECSSCCHHHHHHHHHHHHT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH----HHHHHHHh---CCC-EE--EcCcccccchHHHHHHHHhC
Confidence            379999995 9999999888888999 8999885332    12233333   212 22  2433  2 3322222221  


Q ss_pred             CCCCEEEEcccc
Q 024488          144 NAFDAVMHFAAV  155 (267)
Q Consensus       144 ~~~D~li~~Ag~  155 (267)
                      .++|++|+++|.
T Consensus       241 ~g~D~vid~~g~  252 (356)
T 1pl8_A          241 CKPEVTIECTGA  252 (356)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=96.31  E-value=0.026  Score=48.92  Aligned_cols=70  Identities=19%  Similarity=0.253  Sum_probs=48.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCC-CHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG-DAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~v~~~~~~~~~D~  148 (267)
                      ||+|+|.| +|..|..++..+.+.|++|++++.++...   ..   +.     --+++..|.. |.+.+..+.+  ++|.
T Consensus         1 MK~I~ilG-gg~~g~~~~~~Ak~~G~~vv~vd~~~~~~---~~---~~-----aD~~~~~~~~~d~~~~~~~~~--~~D~   66 (363)
T 4ffl_A            1 MKTICLVG-GKLQGFEAAYLSKKAGMKVVLVDKNPQAL---IR---NY-----ADEFYCFDVIKEPEKLLELSK--RVDA   66 (363)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCT---TT---TT-----SSEEEECCTTTCHHHHHHHHT--SSSE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCh---hH---hh-----CCEEEECCCCcCHHHHHHHhc--CCCE
Confidence            79999999 57899999999999999999998543221   10   00     0134556654 5666655555  7898


Q ss_pred             EEEcc
Q 024488          149 VMHFA  153 (267)
Q Consensus       149 li~~A  153 (267)
                      |+-..
T Consensus        67 v~~~~   71 (363)
T 4ffl_A           67 VLPVN   71 (363)
T ss_dssp             EEECC
T ss_pred             EEECC
Confidence            87543

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.31  E-value=0.0056  Score=53.46  Aligned_cols=76  Identities=14%  Similarity=0.197  Sum_probs=46.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC-HHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~D  147 (267)
                      +++|||+|+ |+||...++.+...|+ +|++++++..    ..+.++++   +.. ..+..+-.+ .+.+.++.. +++|
T Consensus       191 g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~----~~~~a~~l---Ga~-~vi~~~~~~~~~~~~~~~~-gg~D  260 (371)
T 1f8f_A          191 ASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVES----RLELAKQL---GAT-HVINSKTQDPVAAIKEITD-GGVN  260 (371)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHH----HHHHHHHH---TCS-EEEETTTSCHHHHHHHHTT-SCEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHH----HHHHHHHc---CCC-EEecCCccCHHHHHHHhcC-CCCc
Confidence            389999995 9999999888877898 6888885332    22233333   211 122221112 233444433 3799


Q ss_pred             EEEEcccc
Q 024488          148 AVMHFAAV  155 (267)
Q Consensus       148 ~li~~Ag~  155 (267)
                      ++|+++|.
T Consensus       261 ~vid~~g~  268 (371)
T 1f8f_A          261 FALESTGS  268 (371)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999873

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=96.29  E-value=0.016  Score=50.80  Aligned_cols=72  Identities=17%  Similarity=0.213  Sum_probs=53.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +++|+|+|+ |.+|+.+++.+.+.|++|++++..+...  ..    ..     .-..+..|..|.+.+.+++++.++|.|
T Consensus        11 ~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~--~~----~~-----~d~~~~~~~~d~~~l~~~~~~~~~d~v   78 (391)
T 1kjq_A           11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAP--AM----HV-----AHRSHVINMLDGDALRRVVELEKPHYI   78 (391)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCG--GG----GG-----SSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCCc--hh----hh-----ccceEECCCCCHHHHHHHHHHcCCCEE
Confidence            479999986 6899999999999999999998543221  11    11     013456788899999888876689999


Q ss_pred             EEcc
Q 024488          150 MHFA  153 (267)
Q Consensus       150 i~~A  153 (267)
                      +..-
T Consensus        79 ~~~~   82 (391)
T 1kjq_A           79 VPEI   82 (391)
T ss_dssp             EECS
T ss_pred             EECC
Confidence            8743

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.27  E-value=0.01  Score=49.76  Aligned_cols=33  Identities=18%  Similarity=0.291  Sum_probs=30.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r  102 (267)
                      +|+++|.|+++-+|+.++..|+++|++|+++.+
T Consensus       160 Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~  192 (285)
T 3p2o_A          160 GKDAVIIGASNIVGRPMATMLLNAGATVSVCHI  192 (285)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC
Confidence            399999999999999999999999999999864

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.27  E-value=0.0065  Score=52.76  Aligned_cols=74  Identities=16%  Similarity=0.317  Sum_probs=46.6

Q ss_pred             cEEEEEcCCChhHHHH-HHHH-HhCCCe-EEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC--HHHHHHHhhcCC
Q 024488           71 THVLVTGGAGYIGSHA-ALRL-LKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSENA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~l-a~~L-~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~  145 (267)
                      ++|+|+|| |++|... ++.+ ...|++ |++++++.... ...+.++++   +  +..+  |..+  ..++.++ . ++
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~-~~~~~~~~l---G--a~~v--~~~~~~~~~i~~~-~-gg  242 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPD-PTIDIIEEL---D--ATYV--DSRQTPVEDVPDV-Y-EQ  242 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSC-HHHHHHHHT---T--CEEE--ETTTSCGGGHHHH-S-CC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccH-HHHHHHHHc---C--Cccc--CCCccCHHHHHHh-C-CC
Confidence            78999999 9999998 7666 567997 99998643300 012233333   2  2223  4432  2225554 3 37


Q ss_pred             CCEEEEcccc
Q 024488          146 FDAVMHFAAV  155 (267)
Q Consensus       146 ~D~li~~Ag~  155 (267)
                      +|++|+++|.
T Consensus       243 ~Dvvid~~g~  252 (357)
T 2b5w_A          243 MDFIYEATGF  252 (357)
T ss_dssp             EEEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.25  E-value=0.0057  Score=52.79  Aligned_cols=77  Identities=21%  Similarity=0.223  Sum_probs=47.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +.+|+|+|+ |++|...++.+... |++|++++++..    ..+.++++   +... .+..+-...+.+.++....++|+
T Consensus       172 g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~----~~~~~~~l---Ga~~-~i~~~~~~~~~v~~~t~g~g~d~  242 (345)
T 3jv7_A          172 GSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDD----RLALAREV---GADA-AVKSGAGAADAIRELTGGQGATA  242 (345)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHH----HHHHHHHT---TCSE-EEECSTTHHHHHHHHHGGGCEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHH----HHHHHHHc---CCCE-EEcCCCcHHHHHHHHhCCCCCeE
Confidence            389999997 99999888777666 789999985432    22333443   2222 22222122344444444347999


Q ss_pred             EEEcccc
Q 024488          149 VMHFAAV  155 (267)
Q Consensus       149 li~~Ag~  155 (267)
                      +|.++|.
T Consensus       243 v~d~~G~  249 (345)
T 3jv7_A          243 VFDFVGA  249 (345)
T ss_dssp             EEESSCC
T ss_pred             EEECCCC
Confidence            9999874

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.25  E-value=0.009  Score=52.16  Aligned_cols=73  Identities=15%  Similarity=0.066  Sum_probs=46.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCC----C-HHHHHHHhhcC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG----D-AKAVNKFFSEN  144 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----d-~~~v~~~~~~~  144 (267)
                      .+|+|+|+ |+||...++.+...|+ +|+++++++.+    .+.++++   +.. ..  .|..    + .+.+.++.. +
T Consensus       193 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~----~~~a~~l---Ga~-~v--i~~~~~~~~~~~~i~~~t~-g  260 (373)
T 1p0f_A          193 STCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDK----FPKAIEL---GAT-EC--LNPKDYDKPIYEVICEKTN-G  260 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGG----HHHHHHT---TCS-EE--ECGGGCSSCHHHHHHHHTT-S
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHH----HHHHHHc---CCc-EE--EecccccchHHHHHHHHhC-C
Confidence            89999995 9999999888888898 79888754322    2223333   211 12  2322    2 223444333 4


Q ss_pred             CCCEEEEcccc
Q 024488          145 AFDAVMHFAAV  155 (267)
Q Consensus       145 ~~D~li~~Ag~  155 (267)
                      ++|++|+++|.
T Consensus       261 g~Dvvid~~g~  271 (373)
T 1p0f_A          261 GVDYAVECAGR  271 (373)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.25  E-value=0.017  Score=48.86  Aligned_cols=33  Identities=30%  Similarity=0.429  Sum_probs=30.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r  102 (267)
                      +|+++|.|+++-+|+.++..|++.|++|+++.+
T Consensus       165 Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~  197 (300)
T 4a26_A          165 GKRAVVLGRSNIVGAPVAALLMKENATVTIVHS  197 (300)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC
Confidence            399999999999999999999999999999874

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=96.24  E-value=0.038  Score=47.67  Aligned_cols=101  Identities=15%  Similarity=0.153  Sum_probs=57.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCC---CCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLS---RGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENA  145 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~-G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (267)
                      |.+|.|.||||.+|.++.+.|.+. ..++..+..+.   ..-+...+....+.. ..+..+...  .+.+   ++.+  +
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~-~~~~~v~~~--~~~~---~~~~--~   75 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKG-IVELPLQPM--SDIS---EFSP--G   75 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTT-TCCCBEEEE--SSGG---GTCT--T
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccC-ccceeEecc--CCHH---HHhc--C
Confidence            578999999999999999999984 56887776432   111122221111111 012332222  0122   2223  7


Q ss_pred             CCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEecc
Q 024488          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTC  197 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~  197 (267)
                      +|++|-+.+.                  .....+.+.+.+.+. ++|-.|+.
T Consensus        76 ~Dvvf~a~p~------------------~~s~~~~~~~~~~g~-~vIDlSa~  108 (337)
T 3dr3_A           76 VDVVFLATAH------------------EVSHDLAPQFLEAGC-VVFDLSGA  108 (337)
T ss_dssp             CSEEEECSCH------------------HHHHHHHHHHHHTTC-EEEECSST
T ss_pred             CCEEEECCCh------------------HHHHHHHHHHHHCCC-EEEEcCCc
Confidence            8999987652                  224455666666654 67777764

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=96.22  E-value=0.0083  Score=57.87  Aligned_cols=74  Identities=15%  Similarity=0.044  Sum_probs=47.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH---HHHHHHhhcCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~  146 (267)
                      +.+|||.||+|++|...++.+...|++|++++.+. +.    +.++ +   +... ++  |-.+.   +.+.++....++
T Consensus       346 G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~----~~l~-l---ga~~-v~--~~~~~~~~~~i~~~t~g~Gv  413 (795)
T 3slk_A          346 GESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KW----QAVE-L---SREH-LA--SSRTCDFEQQFLGATGGRGV  413 (795)
T ss_dssp             TCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GG----GGSC-S---CGGG-EE--CSSSSTHHHHHHHHSCSSCC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hh----hhhh-c---Chhh-ee--ecCChhHHHHHHHHcCCCCe
Confidence            38999999999999999988888999999987422 11    1111 1   2111 12  32222   333333333579


Q ss_pred             CEEEEcccc
Q 024488          147 DAVMHFAAV  155 (267)
Q Consensus       147 D~li~~Ag~  155 (267)
                      |+++++.|.
T Consensus       414 DvVld~~gg  422 (795)
T 3slk_A          414 DVVLNSLAG  422 (795)
T ss_dssp             SEEEECCCT
T ss_pred             EEEEECCCc
Confidence            999998763

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.21  E-value=0.0067  Score=51.64  Aligned_cols=67  Identities=16%  Similarity=0.252  Sum_probs=43.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +.+|||+|| |++|...++.+...|++|++++ +..+.    +.++++   +  +..+. |  |   .+++  ..++|++
T Consensus       143 g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~----~~~~~l---G--a~~v~-~--d---~~~v--~~g~Dvv  203 (315)
T 3goh_A          143 QREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQ----ALAAKR---G--VRHLY-R--E---PSQV--TQKYFAI  203 (315)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCH----HHHHHH---T--EEEEE-S--S---GGGC--CSCEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhH----HHHHHc---C--CCEEE-c--C---HHHh--CCCccEE
Confidence            389999999 9999999888888899999988 44332    223333   1  22221 3  2   2222  3589999


Q ss_pred             EEcccc
Q 024488          150 MHFAAV  155 (267)
Q Consensus       150 i~~Ag~  155 (267)
                      |+++|.
T Consensus       204 ~d~~g~  209 (315)
T 3goh_A          204 FDAVNS  209 (315)
T ss_dssp             ECC---
T ss_pred             EECCCc
Confidence            999874

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=96.20  E-value=0.0095  Score=47.91  Aligned_cols=33  Identities=21%  Similarity=0.337  Sum_probs=29.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      +++|.|.| +|.+|+.+++.|++.|++|++++|+
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~   60 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRN   60 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            36788998 8999999999999999999999864

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=96.17  E-value=0.016  Score=51.54  Aligned_cols=67  Identities=19%  Similarity=0.224  Sum_probs=50.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +++|+|.| +|.+|+.+++.+.+.|++|++++..+..  ...+    .     .-..+..|..|.+.+.++++  ++|+|
T Consensus        35 ~~~IlIlG-~G~lg~~~~~aa~~lG~~v~v~d~~~~~--p~~~----~-----ad~~~~~~~~d~~~l~~~a~--~~D~V  100 (419)
T 4e4t_A           35 GAWLGMVG-GGQLGRMFCFAAQSMGYRVAVLDPDPAS--PAGA----V-----ADRHLRAAYDDEAALAELAG--LCEAV  100 (419)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCTTC--HHHH----H-----SSEEECCCTTCHHHHHHHHH--HCSEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEECCCCcC--chhh----h-----CCEEEECCcCCHHHHHHHHh--cCCEE
Confidence            38999998 5799999999999999999998743221  1111    1     01345688999999999996  78998


Q ss_pred             E
Q 024488          150 M  150 (267)
Q Consensus       150 i  150 (267)
                      +
T Consensus       101 ~  101 (419)
T 4e4t_A          101 S  101 (419)
T ss_dssp             E
T ss_pred             E
Confidence            8

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.14  E-value=0.067  Score=43.95  Aligned_cols=162  Identities=14%  Similarity=0.106  Sum_probs=88.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---CCCC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAFD  147 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~~~D  147 (267)
                      +|.|.|++|.+|+.+++.+.+. +++|+.+....   .++.+.+..    ...   +.+|++.++...+.+..   .+++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~---~dl~~~~~~----~~D---vvIDfT~p~a~~~~~~~a~~~g~~   71 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG---DPLSLLTDG----NTE---VVIDFTHPDVVMGNLEFLIDNGIH   71 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT---CCTHHHHHT----TCC---EEEECSCTTTHHHHHHHHHHTTCE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC---CCHHHHhcc----CCc---EEEEccChHHHHHHHHHHHHcCCC
Confidence            6899999999999999999866 89998766322   222222211    112   46788888766655432   5788


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccc-----------cC-CCCCCCCCCC-CC
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATY-----------GE-PEKMPITEET-PQ  214 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~-----------g~-~~~~~~~e~~-~~  214 (267)
                      +|+-..|..        .+ ..       ..+..++.+.....+++.+..+.=           .. -++..+.|.. ..
T Consensus        72 ~VigTTG~~--------~e-~~-------~~l~~aa~~~~~~~vv~a~N~siGv~ll~~l~~~aa~~~~dieIiE~HH~~  135 (245)
T 1p9l_A           72 AVVGTTGFT--------AE-RF-------QQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPH  135 (245)
T ss_dssp             EEECCCCCC--------HH-HH-------HHHHHHHHTSTTCEEEECSCCCHHHHHHHHHHHHHGGGCSEEEEEEEECTT
T ss_pred             EEEcCCCCC--------HH-HH-------HHHHHHHHhCCCCCEEEECCccHHHHHHHHHHHHHHhhcCCEEEEECcccC
Confidence            888655421        11 11       122223332323355555543320           00 0111122221 12


Q ss_pred             CCCChHHHHHHHHHHHHHHhhh-------------------cCCCcEEEEeccccccccceeec
Q 024488          215 APINPYGKAKKMAEDIILDFSK-------------------NSDMAVMILRLVVFFTLVAFVIK  259 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~-------------------e~g~~~~~vrp~~v~~~~~~~~G  259 (267)
                      .--.+-|-++..+|.+......                   ..++.+..+|-|-|.+.+.-+|+
T Consensus       136 K~DaPSGTA~~lae~i~~~~~~~~~~~~~~~~~~~g~r~~~~~~i~i~s~R~g~ivg~h~V~f~  199 (245)
T 1p9l_A          136 KADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFG  199 (245)
T ss_dssp             CCSSSCHHHHHHHHHHHHHTTTSCCCCCCCCSCCTTTTCEEETTEEEEEEECTTCCEEEEEEEE
T ss_pred             CCCCCCHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCcceEEEEECCCCCeEEEEEEc
Confidence            2233457777777777654321                   02577899999988887765444

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.13  E-value=0.0091  Score=51.96  Aligned_cols=78  Identities=21%  Similarity=0.239  Sum_probs=52.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcch-------------------hhhhhhcCCCCCceEEEEcc
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGA-------------------VKVLQELFPEPGRLQFIYAD  130 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~D  130 (267)
                      ++|+|.| .||+|.++++.|+..|. +++++|+..-...++                   .+.+.++. ..-+++.+..+
T Consensus       119 ~~VlvvG-~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n-p~v~v~~~~~~  196 (353)
T 3h5n_A          119 AKVVILG-CGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRN-SEISVSEIALN  196 (353)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC-TTSEEEEEECC
T ss_pred             CeEEEEC-CCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHC-CCCeEEEeecc
Confidence            7899999 59999999999999996 888888643222111                   12222221 12356677777


Q ss_pred             CCCHHHHHHHhhcCCCCEEEEcc
Q 024488          131 LGDAKAVNKFFSENAFDAVMHFA  153 (267)
Q Consensus       131 l~d~~~v~~~~~~~~~D~li~~A  153 (267)
                      +++..++.. ++  +.|+||.+.
T Consensus       197 i~~~~~~~~-~~--~~DlVvd~~  216 (353)
T 3h5n_A          197 INDYTDLHK-VP--EADIWVVSA  216 (353)
T ss_dssp             CCSGGGGGG-SC--CCSEEEECC
T ss_pred             cCchhhhhH-hc--cCCEEEEec
Confidence            876654555 55  789999865

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.12  E-value=0.0073  Score=51.22  Aligned_cols=69  Identities=16%  Similarity=0.125  Sum_probs=47.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +++|+|.| .|.||+.+++.|...|++|++.+|+..   +. +.+.+.     .+..+.     .++++++++  +.|+|
T Consensus       157 g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~d~~~~---~~-~~~~~~-----g~~~~~-----~~~l~~~l~--~aDvV  219 (300)
T 2rir_A          157 GSQVAVLG-LGRTGMTIARTFAALGANVKVGARSSA---HL-ARITEM-----GLVPFH-----TDELKEHVK--DIDIC  219 (300)
T ss_dssp             TSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHH---HH-HHHHHT-----TCEEEE-----GGGHHHHST--TCSEE
T ss_pred             CCEEEEEc-ccHHHHHHHHHHHHCCCEEEEEECCHH---HH-HHHHHC-----CCeEEc-----hhhHHHHhh--CCCEE
Confidence            38999999 599999999999999999999996432   11 111221     122221     234556666  78999


Q ss_pred             EEcccc
Q 024488          150 MHFAAV  155 (267)
Q Consensus       150 i~~Ag~  155 (267)
                      |++...
T Consensus       220 i~~~p~  225 (300)
T 2rir_A          220 INTIPS  225 (300)
T ss_dssp             EECCSS
T ss_pred             EECCCh
Confidence            998753

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.05  E-value=0.0083  Score=50.71  Aligned_cols=68  Identities=15%  Similarity=0.147  Sum_probs=46.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +++|+|.| .|.||+.+++.|...|++|++++|+..   .. +.+.+.     .+..+  +   .++++++++  +.|+|
T Consensus       155 g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~---~~-~~~~~~-----g~~~~--~---~~~l~~~l~--~aDvV  217 (293)
T 3d4o_A          155 GANVAVLG-LGRVGMSVARKFAALGAKVKVGARESD---LL-ARIAEM-----GMEPF--H---ISKAAQELR--DVDVC  217 (293)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHH---HH-HHHHHT-----TSEEE--E---GGGHHHHTT--TCSEE
T ss_pred             CCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHH---HH-HHHHHC-----CCeec--C---hhhHHHHhc--CCCEE
Confidence            38999999 699999999999999999999986432   11 111221     12222  1   234556665  78999


Q ss_pred             EEccc
Q 024488          150 MHFAA  154 (267)
Q Consensus       150 i~~Ag  154 (267)
                      +++..
T Consensus       218 i~~~p  222 (293)
T 3d4o_A          218 INTIP  222 (293)
T ss_dssp             EECCS
T ss_pred             EECCC
Confidence            99874

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.04  E-value=0.011  Score=54.76  Aligned_cols=32  Identities=38%  Similarity=0.498  Sum_probs=28.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNL  103 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~  103 (267)
                      ++|+|.| .||+|.++++.|+..|. +++++|..
T Consensus       328 ~kVLIVG-aGGLGs~va~~La~aGVG~ItLvD~D  360 (598)
T 3vh1_A          328 TKVLLLG-AGTLGCYVSRALIAWGVRKITFVDNG  360 (598)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            7899999 79999999999999997 88888753

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.03  E-value=0.0056  Score=51.27  Aligned_cols=68  Identities=19%  Similarity=0.317  Sum_probs=45.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      ++|+|.| +|++|++++..|.+.|++|++++|+.   ++..+..++.     .+..  .+  +   +.++++  +.|+||
T Consensus       130 ~~v~iiG-aG~~g~aia~~L~~~g~~V~v~~r~~---~~~~~l~~~~-----g~~~--~~--~---~~~~~~--~aDiVi  191 (275)
T 2hk9_A          130 KSILVLG-AGGASRAVIYALVKEGAKVFLWNRTK---EKAIKLAQKF-----PLEV--VN--S---PEEVID--KVQVIV  191 (275)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSH---HHHHHHTTTS-----CEEE--CS--C---GGGTGG--GCSEEE
T ss_pred             CEEEEEC-chHHHHHHHHHHHHcCCEEEEEECCH---HHHHHHHHHc-----CCee--eh--h---HHhhhc--CCCEEE
Confidence            7899999 58999999999999999999988643   2222221111     1221  11  2   233444  679999


Q ss_pred             EccccC
Q 024488          151 HFAAVA  156 (267)
Q Consensus       151 ~~Ag~~  156 (267)
                      ++....
T Consensus       192 ~atp~~  197 (275)
T 2hk9_A          192 NTTSVG  197 (275)
T ss_dssp             ECSSTT
T ss_pred             EeCCCC
Confidence            998654

>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}

Probab=95.98  E-value=0.026  Score=49.61  Aligned_cols=71  Identities=11%  Similarity=0.076  Sum_probs=52.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +++|||+|+ |.++..+++.+.+.|+++++++....+. ...+    .     --+++.+|..|.+.+.++++..++|.|
T Consensus         7 ~~~ilI~g~-g~~~~~~~~a~~~~G~~~v~v~~~~~~~-~~~~----~-----ad~~~~~~~~d~~~l~~~~~~~~~d~v   75 (403)
T 4dim_A            7 NKRLLILGA-GRGQLGLYKAAKELGIHTIAGTMPNAHK-PCLN----L-----ADEISYMDISNPDEVEQKVKDLNLDGA   75 (403)
T ss_dssp             CCEEEEECC-CGGGHHHHHHHHHHTCEEEEEECSSCCH-HHHH----H-----CSEEEECCTTCHHHHHHHTTTSCCSEE
T ss_pred             CCEEEEECC-cHhHHHHHHHHHHCCCEEEEEcCCCCCC-cchh----h-----CCeEEEecCCCHHHHHHHHHHcCCCEE
Confidence            489999996 4579999999999999999997421111 1111    1     113467789999999999988789988


Q ss_pred             EE
Q 024488          150 MH  151 (267)
Q Consensus       150 i~  151 (267)
                      +-
T Consensus        76 ~~   77 (403)
T 4dim_A           76 AT   77 (403)
T ss_dssp             EC
T ss_pred             Ee
Confidence            85

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=95.96  E-value=0.012  Score=54.41  Aligned_cols=33  Identities=36%  Similarity=0.498  Sum_probs=29.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~  104 (267)
                      .+|+|.| .||+|.++++.|+..|. +++++|...
T Consensus       327 arVLIVG-aGGLGs~vA~~La~aGVG~ItLvD~D~  360 (615)
T 4gsl_A          327 TKVLLLG-AGTLGCYVSRALIAWGVRKITFVDNGT  360 (615)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence            7999999 69999999999999996 888888643

>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*

Probab=95.95  E-value=0.04  Score=48.97  Aligned_cols=73  Identities=16%  Similarity=0.230  Sum_probs=54.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +++|+|+|+ |.+|+.+++.+.+.|++|++++..+..  ...    ..     .-..+..|..|.+.+.+++++.++|.|
T Consensus        19 ~~~ili~g~-g~~g~~~~~a~~~~G~~v~~v~~~~~~--~~~----~~-----ad~~~~~~~~d~~~l~~~~~~~~~d~V   86 (433)
T 2dwc_A           19 AQKILLLGS-GELGKEIAIEAQRLGVEVVAVDRYANA--PAM----QV-----AHRSYVGNMMDKDFLWSVVEREKPDAI   86 (433)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHTTCEEEEEESSTTC--HHH----HH-----SSEEEESCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCC--hhh----hh-----cceEEECCCCCHHHHHHHHHHcCCCEE
Confidence            478999986 789999999999999999999854322  111    11     013456788899999888876689999


Q ss_pred             EEccc
Q 024488          150 MHFAA  154 (267)
Q Consensus       150 i~~Ag  154 (267)
                      +..-+
T Consensus        87 ~~~~e   91 (433)
T 2dwc_A           87 IPEIE   91 (433)
T ss_dssp             EECSS
T ss_pred             EECcc
Confidence            87543

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=95.81  E-value=0.019  Score=51.66  Aligned_cols=71  Identities=14%  Similarity=0.241  Sum_probs=46.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC-C---eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccC--CCHHH-HHHHhhc
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS-Y---RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL--GDAKA-VNKFFSE  143 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G-~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~~~-v~~~~~~  143 (267)
                      ++|+|.| .|+||+.++..|+++. +   +|++.+...... ++   .+..     .+.+...++  .|.++ +.+++++
T Consensus        14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~-~~---~~~~-----g~~~~~~~Vdadnv~~~l~aLl~~   83 (480)
T 2ph5_A           14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV-DV---AQQY-----GVSFKLQQITPQNYLEVIGSTLEE   83 (480)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC-CH---HHHH-----TCEEEECCCCTTTHHHHTGGGCCT
T ss_pred             CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhh-hH---Hhhc-----CCceeEEeccchhHHHHHHHHhcC
Confidence            6799999 8999999999999864 5   688887533221 11   1222     234445555  44433 5667764


Q ss_pred             CCCCEEEEcc
Q 024488          144 NAFDAVMHFA  153 (267)
Q Consensus       144 ~~~D~li~~A  153 (267)
                        .|+|||.+
T Consensus        84 --~DvVIN~s   91 (480)
T 2ph5_A           84 --NDFLIDVS   91 (480)
T ss_dssp             --TCEEEECC
T ss_pred             --CCEEEECC
Confidence              39999855

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=95.80  E-value=0.04  Score=48.64  Aligned_cols=69  Identities=19%  Similarity=0.258  Sum_probs=51.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +++|+|.|+ |.+|+.+++.+.+.|++|++++ .....  ..+    . .  .....+..|..|.+.+.++++  .+|++
T Consensus        24 ~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p--~~~----~-a--d~~~~~~~~~~d~~~l~~~a~--~~d~i   90 (403)
T 3k5i_A           24 SRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSP--AKQ----I-S--AHDGHVTGSFKEREAVRQLAK--TCDVV   90 (403)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCT--TGG----G-C--CSSCCEESCTTCHHHHHHHHT--TCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCc--HHH----h-c--cccceeecCCCCHHHHHHHHH--hCCEE
Confidence            489999995 7999999999999999999998 43221  111    1 0  112346789999999999998  67887


Q ss_pred             EE
Q 024488          150 MH  151 (267)
Q Consensus       150 i~  151 (267)
                      +-
T Consensus        91 ~~   92 (403)
T 3k5i_A           91 TA   92 (403)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.80  E-value=0.028  Score=47.08  Aligned_cols=33  Identities=21%  Similarity=0.266  Sum_probs=30.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r  102 (267)
                      +|+++|.|+++-+|+.++..|+.+|++|+++.+
T Consensus       161 Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs  193 (285)
T 3l07_A          161 GAYAVVVGASNVVGKPVSQLLLNAKATVTTCHR  193 (285)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred             CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeC
Confidence            399999999999999999999999999998763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	267
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	3e-51
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	6e-45
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-43
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	1e-42
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-38
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	9e-38
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	2e-37
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	9e-36
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	5e-35
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	3e-31
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-31
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	1e-30
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	1e-27
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	1e-27
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-25
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	2e-18
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	7e-17
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	7e-16
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-15
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	4e-15
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	5e-12
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	6e-12
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	8e-12
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	3e-11
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	4e-10
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	2e-09
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	6e-09
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	4e-08
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	4e-08
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	5e-08
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	6e-08
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	9e-08
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	9e-08
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	9e-08
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	1e-07
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	1e-07
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	1e-07
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	2e-07
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-07
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	2e-07
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	3e-07
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	3e-07
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	4e-07
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	4e-07
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	4e-07
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	4e-07
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	4e-07
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	4e-07
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	5e-07
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	6e-07
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	6e-07
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	6e-07
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	7e-07
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	7e-07
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	1e-06
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	1e-06
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	1e-06
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-06
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	2e-06
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	3e-06
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	4e-06
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	4e-06
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	5e-06
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	6e-06
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	8e-06
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	2e-05
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	2e-05
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	2e-05
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-05
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	4e-05
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	5e-05
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	8e-05
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	8e-05
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	1e-04
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	1e-04
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	1e-04
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-04
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-04
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	5e-04
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	6e-04
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	0.001
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	0.001
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	0.001
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	0.001
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	0.002
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	0.002
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	0.002
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	0.002
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	0.002
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	0.002
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	0.002
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	0.003

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score =  169 bits (428), Expect = 3e-51
 Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 5/180 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNL-SRGNIGAVKVL-QELFPEPGRLQFIYAD 130
            L+TG  G  GS+ A  LL+  Y V  +    S  N   V  + Q+      +    Y D
Sbjct: 4   ALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD 63

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           L D   + +   E   D V +  A+++V  S   P          TL +LE++   G++ 
Sbjct: 64  LSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEK 123

Query: 191 ---LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRL 247
                 +ST   YG  +++P  E TP  P +PY  AK  A  I +++ ++  M      L
Sbjct: 124 KTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGIL 183

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  151 bits (383), Expect = 6e-45
 Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 17/180 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGGAG++GSH   +L+ D + VT+VDN   G    V+           +     +L 
Sbjct: 4   ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW---------IGHENFELI 54

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   V   + E   D + H A+ A       +P+K     T  TL +L    R G   L+
Sbjct: 55  NHDVVEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLL 111

Query: 193 YSSTCATYGEPEKMPITEE-----TPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRL 247
            +ST   YG+PE  P +E+      P  P   Y + K++AE +   + K   + V + R+
Sbjct: 112 LASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARI 171

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  147 bits (373), Expect = 4e-43
 Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 23/195 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTI-VDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           +L+TGGAG+IGS     ++K++    + +D L+    G ++ L ++     R  F +AD+
Sbjct: 3   ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYA--GNLESLSDISESN-RYNFEHADI 59

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT- 190
            D+  + + F +   DAVMH AA ++V  S   P  +       T  +LE   ++     
Sbjct: 60  CDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALG 119

Query: 191 --------LIYSSTCATYGEPEKMPI----------TEETPQAPINPYGKAKKMAEDIIL 232
                     + ST   YG+                TE T  AP +PY  +K  ++ ++ 
Sbjct: 120 EDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVR 179

Query: 233 DFSKNSDMAVMILRL 247
            + +   +  ++   
Sbjct: 180 AWRRTYGLPTIVTNC 194

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  146 bits (369), Expect = 1e-42
 Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 6/181 (3%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNL-SRGNIGAVKVLQELFPE--PGRLQFIYA 129
            L+TG  G  GS+ A  LL+  Y V  +    S  N G ++ L +       G ++  Y 
Sbjct: 4   ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYG 63

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
           DL D+  + K  +E     + +  A ++V  S              TL +L+++   G+ 
Sbjct: 64  DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLI 123

Query: 190 ---TLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
                  +ST   YG+ +++P  E TP  P +PYG AK  A  I+++F +  ++  +   
Sbjct: 124 NSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGI 183

Query: 247 L 247
           L
Sbjct: 184 L 184

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score =  135 bits (339), Expect = 2e-38
 Identities = 63/177 (35%), Positives = 98/177 (55%), Gaps = 4/177 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG+GYIGSH  ++LL++ + V I+DNL       + V++ L  +     F+  D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   + +   ++A D V+HFA +  VGES   PL+YY N  + TL ++ +M    V   I
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120

Query: 193 YSSTCATYGEPEKMPITEET-PQAPINPYGKAKKMAEDIILD-FSKNSDMAVMILRL 247
           +SS+   YG+  K+P  E      P +PYGK+K M E I+ D      D ++ +LR 
Sbjct: 121 FSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRY 177

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score =  133 bits (335), Expect = 9e-38
 Identities = 46/175 (26%), Positives = 78/175 (44%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            L+TG AG+IGS+    LLK   +V  +DN + G+   +  ++ L  E     F +    
Sbjct: 19  WLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGD 78

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
                +   +    D V+H AA+  V  S  DP+          L +L +     V +  
Sbjct: 79  IRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFT 138

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRL 247
           Y+++ +TYG+   +P  E+T   P++PY   K + E     FS+    + + LR 
Sbjct: 139 YAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRY 193

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  132 bits (333), Expect = 2e-37
 Identities = 75/180 (41%), Positives = 99/180 (55%), Gaps = 8/180 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGGAGYIGSH  + L+++ Y   + DNLS     +V  L+ L      + F   DL 
Sbjct: 4   VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKH--HIPFYEVDLC 61

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D K + K F E   D+V+HFA +  VGEST  PL+YYHN    T+V+LE M ++ V   +
Sbjct: 62  DRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFV 121

Query: 193 YSSTCATYGE----PEKMPITEETPQAPINPYGKAKKMAEDIILDF--SKNSDMAVMILR 246
           +SS+   YG+    P  +PI EE P  P NPYG  K   E+I+ D   S        ILR
Sbjct: 122 FSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILR 181

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score =  127 bits (320), Expect = 9e-36
 Identities = 28/181 (15%), Positives = 60/181 (33%), Gaps = 29/181 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V + G  G +GS    +L +      ++                             +L 
Sbjct: 5   VFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDEL-----------------------NLL 41

Query: 133 DAKAVNKFFSENAFDAVMHFA-AVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
           D++AV+ FF+    D V   A  V  +  +   P  + +        ++ +  ++ V+ L
Sbjct: 42  DSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKL 101

Query: 192 IYSSTCATYGEPEKMPITEE-----TPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           ++  +   Y +  K P+ E      T +    PY  AK     +   +++        + 
Sbjct: 102 LFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVM 161

Query: 247 L 247
            
Sbjct: 162 P 162

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score =  126 bits (316), Expect = 5e-35
 Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 11/181 (6%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSY------RVTIVDNLSRGNIGAVKVLQELFPEPGRLQF 126
           +LVTGGAG+IGSH   +LL  +Y       V ++D+L+    G    L  +  +P RL+F
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYA--GNRANLAPVDADP-RLRF 59

Query: 127 IYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
           ++ D+ DA            DA++HFAA ++V  S      +       T  +L+     
Sbjct: 60  VHGDIRDAG--LLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA 117

Query: 187 GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
           GV  +++ ST   YG  +    TE +P  P +PY  +K  ++ +   + +   + V I R
Sbjct: 118 GVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITR 177

Query: 247 L 247
            
Sbjct: 178 C 178

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score =  116 bits (290), Expect = 3e-31
 Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 20/196 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TGG G++GS+ A   L     + + DNLSR   GA   L  L    G  +F++ D+ 
Sbjct: 3   LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRK--GATDNLHWL-SSLGNFEFVHGDIR 59

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT-L 191
           +   V +  ++   D+  H A    +  S  +P   +      TL +LE++ ++  +  +
Sbjct: 60  NKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNI 119

Query: 192 IYSSTCATYGEPEKMP----------------ITEETPQAPINPYGKAKKMAEDIILDFS 235
           IYSST   YG+ E+                    E T     +PYG +K  A+  +LD++
Sbjct: 120 IYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYA 179

Query: 236 KNSDMAVMILRLVVFF 251
           +   +  ++ R    +
Sbjct: 180 RIFGLNTVVFRHSSMY 195

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  116 bits (290), Expect = 3e-31
 Identities = 44/190 (23%), Positives = 85/190 (44%), Gaps = 21/190 (11%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA 129
           +++VTGGAG+IGS+    +  +     VT++D L+    G    L+ +  +  R++ +  
Sbjct: 4   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYA--GNKANLEAILGD--RVELVVG 59

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD 189
           D+ DA+ V+K  ++      +H+AA ++   S  DP  + H     T  +LE+  ++ + 
Sbjct: 60  DIADAELVDKLAAKADAI--VHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIR 117

Query: 190 TLIYSSTCATYGE------------PEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN 237
              + ST   YG+                  T ET   P +PY   K  ++ I+  + ++
Sbjct: 118 F-HHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRS 176

Query: 238 SDMAVMILRL 247
             +   I   
Sbjct: 177 FGVKATISNC 186

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  114 bits (286), Expect = 1e-30
 Identities = 40/182 (21%), Positives = 68/182 (37%), Gaps = 7/182 (3%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNL-SRGNIGAVKVLQEL--FPEPGRLQFIYA 129
            L+TG  G  GS+    LL   Y V  +    S  N   +  +           ++  YA
Sbjct: 4   ALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYA 63

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLES----MAR 185
           DL DA ++ ++      D V + AA ++V  S   P      + +  L +LE+       
Sbjct: 64  DLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTID 123

Query: 186 HGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
            G     Y +  +        P +E TP  P +PY  +K  A    +++ +   +     
Sbjct: 124 SGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNG 183

Query: 246 RL 247
            L
Sbjct: 184 IL 185

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score =  106 bits (265), Expect = 1e-27
 Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 4/176 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG  G  G++ A  LL+  YRV  +      +      L+EL  E   +Q+   D+ 
Sbjct: 3   ALVTGITGQDGAYLAKLLLEKGYRVHGLVARR--SSDTRWRLRELGIEG-DIQYEDGDMA 59

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           DA +V +   +     V + AA ++VG S   P+            +LE++ +   +T  
Sbjct: 60  DACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRF 119

Query: 193 -YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRL 247
             +ST   +G  +     E TP  P +PYG AK     I +++ ++  +      L
Sbjct: 120 YQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGIL 175

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  106 bits (266), Expect = 1e-27
 Identities = 32/182 (17%), Positives = 66/182 (36%), Gaps = 17/182 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           + +TG  G+I SH A RL  + + V   D     +         +  +    +F   DL 
Sbjct: 18  ISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH---------MTEDMFCDEFHLVDLR 68

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
             +   K          +           +   +  Y+N    +  ++E+   +G+    
Sbjct: 69  VMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTM-ISFNMIEAARINGIKRFF 127

Query: 193 YSSTCATYGEPEKMPIT-------EETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
           Y+S+   Y E +++  T       +  P  P + +G  K   E++   ++K+  +   I 
Sbjct: 128 YASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIG 187

Query: 246 RL 247
           R 
Sbjct: 188 RF 189

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (251), Expect = 1e-25
 Identities = 67/180 (37%), Positives = 97/180 (53%), Gaps = 6/180 (3%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP----EPGRLQFIY 128
           VLVTGGAGYIGSH  L LL+  Y   ++DN      G   + + L          ++F  
Sbjct: 5   VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64

Query: 129 ADLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV 188
            D+ D  A+ + F + +F AV+HFA +  VGES   PL YY    + T+ +LE M  HGV
Sbjct: 65  MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124

Query: 189 DTLIYSSTCATYGEPEKMPITEETPQ-APINPYGKAKKMAEDIILDFSK-NSDMAVMILR 246
             L++SS+   YG P+ +P+ E  P     NPYGK+K   E++I D  + +     ++LR
Sbjct: 125 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLR 184

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 81.0 bits (198), Expect = 2e-18
 Identities = 36/195 (18%), Positives = 63/195 (32%), Gaps = 6/195 (3%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V VTG  G+ G   +L L      V      +         L E       +Q    D+ 
Sbjct: 11  VFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTV----PSLFETARVADGMQSEIGDIR 66

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D   + +   E   + V H AA   V  S  +P++ Y      T+ +LE++   G    +
Sbjct: 67  DQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAV 126

Query: 193 YSSTCATYGEPEKMPITEETPQ--APINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVF 250
            + T     + ++        +     +PY  +K  AE +   +  +        +    
Sbjct: 127 VNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTA 186

Query: 251 FTLVAFVIKINPTDR 265
              V     I   D 
Sbjct: 187 VATVRAGNVIGGGDW 201

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 77.3 bits (188), Expect = 7e-17
 Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 14/99 (14%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG---------- 122
           V+V GG GY G   AL L K +Y V IVDNL R        L+ L P             
Sbjct: 4   VMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA 63

Query: 123 ----RLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAY 157
                ++    D+ D + + + F     D+V+HF     
Sbjct: 64  LTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRS 102

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 73.8 bits (179), Expect = 7e-16
 Identities = 30/172 (17%), Positives = 57/172 (33%), Gaps = 22/172 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+ G  G +G     R L     +  +D  S+                        D  
Sbjct: 3   ILLFGKTGQVGWELQ-RSLAPVGNLIALDVHSK--------------------EFCGDFS 41

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           + K V +   +   D +++ AA   V ++  +P        ++   + ++    G   + 
Sbjct: 42  NPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVH 101

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMI 244
           YS+     G    +P  E    +P+N YGK K   E  + D      +    
Sbjct: 102 YSTDYVFPG-TGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTS 152

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 73.7 bits (179), Expect = 1e-15
 Identities = 62/197 (31%), Positives = 92/197 (46%), Gaps = 23/197 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKV--------------LQEL 117
           VLV GGAGYIGSH    LL+D+ + V IVD+L   +  +  V                + 
Sbjct: 5   VLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKP 64

Query: 118 FPEPGRLQFIYADLGDAKAVNK-FFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNT 176
                       D+ +   +N  F      DAV+H  A   VGES  DPLKYY N     
Sbjct: 65  PWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGI 124

Query: 177 LVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-------APINPYGKAKKMAED 229
           L +L++M  H  D +I+SS+ A +G P    ++            +P +PYG++K +AE 
Sbjct: 125 LRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAER 184

Query: 230 IILDFSKNSDMAVMILR 246
           +I D ++   +  + LR
Sbjct: 185 MIRDCAEAYGIKGICLR 201

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 71.9 bits (174), Expect = 4e-15
 Identities = 32/179 (17%), Positives = 68/179 (37%), Gaps = 16/179 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           VL+ G  G+IG+H   RLL++  Y V  +D  S         +      P    F+  D+
Sbjct: 3   VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDA-------ISRFLNHP-HFHFVEGDI 54

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTL 191
                  ++  +   D V+   A+A   E T +PL+ +       L ++    ++    +
Sbjct: 55  SIHSEWIEYHVKK-CDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII 113

Query: 192 IYSSTCATYGEPEKMPITEETPQ------APINPYGKAKKMAEDIILDFSKNSDMAVMI 244
             S++       +K    + +         P   Y  +K++ + +I  + +   +   +
Sbjct: 114 FPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 172

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 62.9 bits (151), Expect = 5e-12
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTG  G++ SH   +LL+  Y+V      S   +  ++   +          +  D+ 
Sbjct: 14  VLVTGANGFVASHVVEQLLEHGYKVRGTAR-SASKLANLQKRWDAKYPGRFETAVVEDML 72

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
              A ++     A  A +       V  S          I      +  + A   V   +
Sbjct: 73  KQGAYDEVIKGAAGVAHIAS----VVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFV 128

Query: 193 YSSTCATYGEPEK--------------------MPITEETPQAPINPYGKAKKMAEDIIL 232
            +S+  +   P+                       + E  PQ  +  Y  +K  AE    
Sbjct: 129 LTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAW 188

Query: 233 DF 234
            F
Sbjct: 189 KF 190

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 62.1 bits (149), Expect = 6e-12
 Identities = 34/168 (20%), Positives = 56/168 (33%), Gaps = 25/168 (14%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TG  G +G     +L   +  V   D                            D+ 
Sbjct: 4   ILITGANGQLGREIQKQLKGKNVEVIPTD------------------------VQDLDIT 39

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +  AVNKFF+E   + V++ AA   V +        Y         +  +    G + + 
Sbjct: 40  NVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQ 99

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDM 240
            S+         K PITE     P + YGK K   E+ +   +    +
Sbjct: 100 ISTDYVFD-GEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYI 146

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 62.0 bits (148), Expect = 8e-12
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGN 107
           ++VTGGAG+IGS+    L       + +VDNL  G 
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT 37

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.3 bits (142), Expect = 3e-11
 Identities = 23/179 (12%), Positives = 52/179 (29%), Gaps = 29/179 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           + + G  G  G     + ++  Y VT++    R +                     AD+ 
Sbjct: 6   IAIFGATGQTGLTTLAQAVQAGYEVTVLV---RDSSRLPSEGPRPAHVVVGDVLQAADVD 62

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
              A          DAV+             + L     ++     ++ +M  HGVD ++
Sbjct: 63  KTVA--------GQDAVIVLLGTR-------NDLSPTTVMSEGARNIVAAMKAHGVDKVV 107

Query: 193 YSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFF 251
             ++     +P K+P         +            ++    + S +  + +      
Sbjct: 108 ACTSAFLLWDPTKVPP-------RLQAVTDDHIRMHKVL----RESGLKYVAVMPPHIG 155

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 57.1 bits (136), Expect = 4e-10
 Identities = 11/59 (18%), Positives = 22/59 (37%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           +L+ G  GYIG H A   L   +   ++   S  +  + K       +      ++  +
Sbjct: 6   ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI 64

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 54.1 bits (128), Expect = 2e-09
 Identities = 18/103 (17%), Positives = 30/103 (29%), Gaps = 10/103 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTG +G  G     +L + S +      +                  G       D+ 
Sbjct: 6   VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQ--------GKEKIGGEADVFIGDIT 57

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSN 175
           DA   +   +    DA++   +     +   DP K        
Sbjct: 58  DAD--SINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIF 98

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 53.2 bits (126), Expect = 6e-09
 Identities = 18/136 (13%), Positives = 38/136 (27%), Gaps = 14/136 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+ GG GYIG       +   +   ++      +      +   F + G  + I A L 
Sbjct: 6   VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLG-AKLIEASLD 64

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           D + +     +                           +     L ++E++   G     
Sbjct: 65  DHQRLVDALKQVDVVISALAG-------------GVLSHHILEQLKLVEAIKEAGNIKRF 111

Query: 193 YSSTCATYGEPEKMPI 208
             S      +  +  +
Sbjct: 112 LPSEFGMDPDIMEHAL 127

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (121), Expect = 4e-08
 Identities = 31/167 (18%), Positives = 49/167 (29%), Gaps = 5/167 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEP--GRLQFIYAD 130
            +VTGGA  IG      LL+    V I          A   LQ   P     R+  I  +
Sbjct: 15  AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCN 74

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
           + + + VN                V   G   L P     +I+S     +      G   
Sbjct: 75  IRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPA---EHISSKGWHAVLETNLTGTFY 131

Query: 191 LIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN 237
           +  +   +   E     +    P     P       A   + + +K+
Sbjct: 132 MCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKS 178

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (120), Expect = 4e-08
 Identities = 33/140 (23%), Positives = 49/140 (35%), Gaps = 10/140 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG A  IG   A  LL    +V +VD      +     L E F EP +  FI  D+ 
Sbjct: 6   ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF-EPQKTLFIQCDVA 64

Query: 133 DAKAVNKFFSE--NAFDAVMHFAAVAYVGESTLDPLKYYHNITSN---TLVVLESMARHG 187
           D + +   F +  + F  +      A V            N+ S    T + L+ M++  
Sbjct: 65  DQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQN 124

Query: 188 VDT----LIYSSTCATYGEP 203
                  +  SS        
Sbjct: 125 GGEGGIIINMSSLAGLMPVA 144

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 50.5 bits (120), Expect = 5e-08
 Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 5/91 (5%)

Query: 53  QSPTFSSPSPFSQHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVK 112
             P    P   S   EG    LVTG    IG   A+ L +   +V +    +     A +
Sbjct: 4   AIPGPLGPQSASL--EGKV-ALVTGAGRGIGREMAMELGRRGCKVIVNY--ANSTESAEE 58

Query: 113 VLQELFPEPGRLQFIYADLGDAKAVNKFFSE 143
           V+  +         + A++G  + + + F E
Sbjct: 59  VVAAIKKNGSDAACVKANVGVVEDIVRMFEE 89

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 50.0 bits (119), Expect = 6e-08
 Identities = 12/71 (16%), Positives = 29/71 (40%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V++TG +  IG   A+   ++   VTI    S       +++ +      ++  + AD+ 
Sbjct: 8   VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT 67

Query: 133 DAKAVNKFFSE 143
                ++  + 
Sbjct: 68  TEDGQDQIINS 78

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 49.6 bits (118), Expect = 9e-08
 Identities = 29/161 (18%), Positives = 47/161 (29%), Gaps = 12/161 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
            LVTGG+  +G   A  L +    V +     R    A +  Q+L  + G        D+
Sbjct: 8   ALVTGGSRGLGFGIAQGLAEAGCSVVVAS---RNLEEASEAAQKLTEKYGVETMAFRCDV 64

Query: 132 GDAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
            + + V K            D V++ A +     +   PL  +  +    L     + R 
Sbjct: 65  SNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCRE 124

Query: 187 GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA 227
                                +T E    P      A K  
Sbjct: 125 ---AFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGG 162

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 49.4 bits (117), Expect = 9e-08
 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG    IG   ALRL+KD + V I D     +  A  V  E+    G    +  D+ 
Sbjct: 4   ALVTGAGQGIGKAIALRLVKDGFAVAIAD---YNDATAKAVASEINQAGGHAVAVKVDVS 60

Query: 133 DAKAVNKFFSE 143
           D   V     +
Sbjct: 61  DRDQVFAAVEQ 71

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 49.7 bits (118), Expect = 9e-08
 Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 9/97 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            ++TGGAG IG   A   ++   +V I D          + +      P  + F++ D+ 
Sbjct: 9   AIITGGAGGIGETTAKLFVRYGAKVVIADI----ADDHGQKVCNNIGSPDVISFVHCDVT 64

Query: 133 DAKAVNKFFSENA-----FDAVMHFAAVAYVGESTLD 164
             + V              D +     V      ++ 
Sbjct: 65  KDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSIL 101

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 49.3 bits (117), Expect = 1e-07
 Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 4/72 (5%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
           ++VTGG   IG      +      V ++    R    AV+V +++  E G + +    D+
Sbjct: 12  IIVTGGNRGIGLAFTRAVAAAGANVAVIY---RSAADAVEVTEKVGKEFGVKTKAYQCDV 68

Query: 132 GDAKAVNKFFSE 143
            +   V K   +
Sbjct: 69  SNTDIVTKTIQQ 80

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 49.2 bits (117), Expect = 1e-07
 Identities = 20/121 (16%), Positives = 41/121 (33%), Gaps = 9/121 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            ++TGG   IG   A + +++  +V I       +    +   +    P ++QF   D  
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGR----HSDVGEKAAKSVGTPDQIQFFQHDSS 64

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG 187
           D     K F            +++ A +A            +  + +  L  +    R G
Sbjct: 65  DEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLG 124

Query: 188 V 188
           +
Sbjct: 125 I 125

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 49.0 bits (116), Expect = 1e-07
 Identities = 27/155 (17%), Positives = 48/155 (30%), Gaps = 6/155 (3%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG  G IG   ALRL ++   + ++D          K    +  +    +    D+ 
Sbjct: 8   CLVTGAGGNIGLATALRLAEEGTAIALLD---MNREALEKAEASVREKGVEARSYVCDVT 64

Query: 133 DAKAVNKFFSE--NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT 190
             +AV          F  +      A    +      Y  +  +  L +  + A H +  
Sbjct: 65  SEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKA 124

Query: 191 LIYSSTCATYGEPEKMP-ITEETPQAPINPYGKAK 224
           +        YG       +        +  YG +K
Sbjct: 125 VSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSK 159

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 48.6 bits (115), Expect = 2e-07
 Identities = 19/71 (26%), Positives = 25/71 (35%), Gaps = 3/71 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG    IG   A RL K+  RV +     RG  G    L+EL            D+ 
Sbjct: 5   ALVTGATSGIGLEIARRLGKEGLRVFVCA---RGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 133 DAKAVNKFFSE 143
               +    + 
Sbjct: 62  SVPEIEALVAA 72

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 48.5 bits (115), Expect = 2e-07
 Identities = 22/150 (14%), Positives = 41/150 (27%), Gaps = 18/150 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTGG+  IG      L      V       R        L +   +  +++    DL 
Sbjct: 11  ALVTGGSRGIGYGIVEELASLGASVYTCS---RNQKELNDCLTQWRSKGFKVEASVCDLS 67

Query: 133 DAKAVNKFFSE------NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTL--------- 177
                 +  +          + +++ A +    E+    ++ Y  I S            
Sbjct: 68  SRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVL 127

Query: 178 VVLESMARHGVDTLIYSSTCATYGEPEKMP 207
                 A    + +  SS       P +  
Sbjct: 128 AHPFLKASERGNVVFISSVSGALAVPYEAV 157

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 48.4 bits (115), Expect = 2e-07
 Identities = 14/92 (15%), Positives = 32/92 (34%), Gaps = 5/92 (5%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            ++TG +  IG   A+   ++  +VTI    +       + +         +  + AD+ 
Sbjct: 8   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 67

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVG 159
                ++  S         D +++ A  A   
Sbjct: 68  TDAGQDEILSTTLGKFGKLDILVNNAGAAIPD 99

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 48.5 bits (114), Expect = 3e-07
 Identities = 16/135 (11%), Positives = 39/135 (28%), Gaps = 19/135 (14%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           + V G  G  G+          + V         ++  +   +EL   P  +      L 
Sbjct: 6   IAVVGATGRQGASLIRVAAAVGHHVRA---QVH-SLKGLI-AEELQAIPN-VTLFQGPLL 59

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI 192
           +   +         D +   A +A++  ++        +  +    + ++  R G     
Sbjct: 60  NNVPL--------MDTLFEGAHLAFINTTS-----QAGDEIAIGKDLADAAKRAGTIQHY 106

Query: 193 YSSTCATYGEPEKMP 207
             S+   +      P
Sbjct: 107 IYSSMPDHSLYGPWP 121

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 48.2 bits (114), Expect = 3e-07
 Identities = 16/100 (16%), Positives = 30/100 (30%), Gaps = 4/100 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
             +TGG   +G      L     +  I     R         +++  + G ++  I  D+
Sbjct: 28  AFITGGGTGLGKGMTTLLSSLGAQCVIAS---RKMDVLKATAEQISSQTGNKVHAIQCDV 84

Query: 132 GDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHN 171
            D   V    SE    A      +     + + P +    
Sbjct: 85  RDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSP 124

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 47.7 bits (113), Expect = 4e-07
 Identities = 14/69 (20%), Positives = 22/69 (31%), Gaps = 3/69 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG    IG   A  L K    V  +    R       V+ E+            D+ 
Sbjct: 13  ALVTGAGRGIGREIAKMLAKSVSHVICIS---RTQKSCDSVVDEIKSFGYESSGYAGDVS 69

Query: 133 DAKAVNKFF 141
             + +++  
Sbjct: 70  KKEEISEVI 78

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.7 bits (113), Expect = 4e-07
 Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 8/88 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG    IG      L     +V  V    R N   V + +E       ++ +  DLG
Sbjct: 8   ALVTGAGKGIGRDTVKALHASGAKVVAVT---RTNSDLVSLAKEC----PGIEPVCVDLG 60

Query: 133 DAKAVNKFFSE-NAFDAVMHFAAVAYVG 159
           D  A  K        D +++ AA+  + 
Sbjct: 61  DWDATEKALGGIGPVDLLVNNAALVIMQ 88

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 47.7 bits (113), Expect = 4e-07
 Identities = 14/71 (19%), Positives = 30/71 (42%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V++TG +  IG  AA+   K+  +VTI            + + +      ++  + AD+ 
Sbjct: 7   VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT 66

Query: 133 DAKAVNKFFSE 143
           +A   +   + 
Sbjct: 67  EASGQDDIINT 77

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 47.8 bits (113), Expect = 4e-07
 Identities = 28/144 (19%), Positives = 44/144 (30%), Gaps = 15/144 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            L TG    IG   A+ L +    V +    S     A +V+ EL     +   I AD+ 
Sbjct: 9   ALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSK--AAEEVVAELKKLGAQGVAIQADIS 66

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLV--------V 179
               V   F +        D VM  + +    +      + +  + +             
Sbjct: 67  KPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQG 126

Query: 180 LESMARHGVDTLIYSSTCATYGEP 203
           L+   R G   L  S      G P
Sbjct: 127 LKHCRRGGRIILTSSIAAVMTGIP 150

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 47.8 bits (113), Expect = 4e-07
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+TGG   +G   A+RL  +  ++++VD  S G   +   + E  P+   +    AD+ 
Sbjct: 7   VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPD-AEVLTTVADVS 65

Query: 133 DAKAVNKFFSE 143
           D   V  + + 
Sbjct: 66  DEAQVEAYVTA 76

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 47.4 bits (112), Expect = 4e-07
 Identities = 15/71 (21%), Positives = 22/71 (30%), Gaps = 3/71 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTGG+  IG      L     RV       R      + L+    +   ++    DL 
Sbjct: 9   ALVTGGSKGIGYAIVEELAGLGARVYTCS---RNEKELDECLEIWREKGLNVEGSVCDLL 65

Query: 133 DAKAVNKFFSE 143
                +K    
Sbjct: 66  SRTERDKLMQT 76

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 47.3 bits (112), Expect = 5e-07
 Identities = 14/98 (14%), Positives = 29/98 (29%), Gaps = 8/98 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            ++TG    IG   A+        V + D        A  V+ E+    G+      D+ 
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSD---INADAANHVVDEIQQLGGQAFACRCDIT 70

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDP 165
             + ++             D +++ A         +  
Sbjct: 71  SEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPM 108

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 47.0 bits (111), Expect = 6e-07
 Identities = 14/71 (19%), Positives = 26/71 (36%), Gaps = 2/71 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V++TG +  +G   A+R   +  +V +          A  VL+E+    G    +  D+ 
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYR--SKEDEANSVLEEIKKVGGEAIAVKGDVT 67

Query: 133 DAKAVNKFFSE 143
               V      
Sbjct: 68  VESDVINLVQS 78

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 47.0 bits (111), Expect = 6e-07
 Identities = 33/130 (25%), Positives = 49/130 (37%), Gaps = 11/130 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +LVTG A  IG  A     ++   +  VD   R      + +  L         + AD+ 
Sbjct: 8   ILVTGAASGIGRAALDLFAREGASLVAVD---REERLLAEAVAAL---EAEAIAVVADVS 61

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG 187
           D KAV   F+E          V HFA VA+   S   PL+ +  +    L     +AR  
Sbjct: 62  DPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKA 121

Query: 188 VDTLIYSSTC 197
            + L    + 
Sbjct: 122 GEVLEEGGSL 131

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 46.9 bits (111), Expect = 6e-07
 Identities = 22/150 (14%), Positives = 46/150 (30%), Gaps = 19/150 (12%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTGGA  +G      LL +  +V   D          ++  EL     R  F+  D+ 
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSD---INEAAGQQLAAEL---GERSMFVRHDVS 62

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTL--------VV 179
                    +         + +++ A +   G+     L+ +  +               
Sbjct: 63  SEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQG 122

Query: 180 LESMARHGVDTLIYSSTCATYGEPEKMPIT 209
           + +M   G   +  +S  +     +    +
Sbjct: 123 IAAMKETGGSIINMASVSSWLPIEQYAGYS 152

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (111), Expect = 7e-07
 Identities = 29/146 (19%), Positives = 48/146 (32%), Gaps = 17/146 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTG    IG      L     RV  V             L  L  E   ++ +  DLG
Sbjct: 10  VLVTGAGKGIGRGTVQALHATGARVVAVSR-------TQADLDSLVRECPGIEPVCVDLG 62

Query: 133 DAKAVNKFFSE-NAFDAVMHFAAVAYVGE-STLDPLKYYHNITSNT--------LVVLES 182
           D +A  +        D +++ AAVA +     +    +  +   N         +V    
Sbjct: 63  DWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGL 122

Query: 183 MARHGVDTLIYSSTCATYGEPEKMPI 208
           +AR     ++  S+  +        +
Sbjct: 123 IARGVPGAIVNVSSQCSQRAVTNHSV 148

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 47.0 bits (111), Expect = 7e-07
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 2/69 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V+VTG +  IG   AL L K   +V +    +R    A +V +++    G+      D+ 
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNY--ARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 133 DAKAVNKFF 141
               V    
Sbjct: 62  KEADVEAMM 70

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.5 bits (110), Expect = 1e-06
 Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 6/92 (6%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +G IG+  A  L++   +V      + GNI  +    +    PG L     DL 
Sbjct: 13  ALVTGASGGIGAAVARALVQQGLKVVGCA-RTVGNIEELAAECKSAGYPGTLIPYRCDLS 71

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVG 159
           + + +   FS      +  D  ++ A +A   
Sbjct: 72  NEEDILSMFSAIRSQHSGVDICINNAGLARPD 103

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 46.1 bits (109), Expect = 1e-06
 Identities = 17/119 (14%), Positives = 46/119 (38%), Gaps = 11/119 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V++TGGA  +G+ AA + +    RV + D     +       +EL       ++ + D+ 
Sbjct: 8   VIITGGARGLGAEAARQAVAAGARVVLAD---VLDEEGAATAREL---GDAARYQHLDVT 61

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH 186
             +   +  +       + D +++ A ++       + ++ +  +    L  +    + 
Sbjct: 62  IEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKT 120

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (109), Expect = 1e-06
 Identities = 28/143 (19%), Positives = 43/143 (30%), Gaps = 21/143 (14%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V+VTGG   IG+      +    RV I D             + L  E     FI  D+ 
Sbjct: 9   VVVTGGGRGIGAGIVRAFVNSGARVVICDK-------DESGGRALEQELPGAVFILCDVT 61

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGEST--LDPLKYYHNITSN-------TLV 178
               V    SE        D V++ A      +         +   +  N       T +
Sbjct: 62  QEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKL 121

Query: 179 VLESMARHGVDTLIYSSTCATYG 201
            L  + +   + +  SS     G
Sbjct: 122 ALPYLRKSQGNVINISSLVGAIG 144

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 45.8 bits (108), Expect = 2e-06
 Identities = 12/71 (16%), Positives = 18/71 (25%), Gaps = 3/71 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG   IG             +       R      + L +   +  ++     D  
Sbjct: 11  VLVTGGTKGIGHAIVEEFAGFGAVIHTCA---RNEYELNECLSKWQKKGFQVTGSVCDAS 67

Query: 133 DAKAVNKFFSE 143
                 K    
Sbjct: 68  LRPEREKLMQT 78

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 45.3 bits (107), Expect = 2e-06
 Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 5/71 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            ++TGGA  IG   A R   +   + I D +      A   ++ L     R+  +  D+ 
Sbjct: 8   AVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNL---GRRVLTVKCDVS 62

Query: 133 DAKAVNKFFSE 143
               V  F  +
Sbjct: 63  QPGDVEAFGKQ 73

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 45.4 bits (107), Expect = 3e-06
 Identities = 19/149 (12%), Positives = 47/149 (31%), Gaps = 24/149 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+TGGA  +G     R + +  +V ++D   +      ++  +       +  I  D+ 
Sbjct: 8   VLITGGASGLGRALVDRFVAEGAKVAVLD---KSAERLAELETDH---GDNVLGIVGDVR 61

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLV--------- 178
             +   +  S         D ++  A +     + +D  +   +   + +          
Sbjct: 62  SLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIH 121

Query: 179 ----VLESMARHGVDTLIYSSTCATYGEP 203
                L ++     + +   S    Y   
Sbjct: 122 AVKACLPALVASRGNVIFTISNAGFYPNG 150

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 44.4 bits (104), Expect = 4e-06
 Identities = 16/72 (22%), Positives = 24/72 (33%), Gaps = 3/72 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
            +VTG    IG   A  L      + +            KV   L  + G ++ +  ADL
Sbjct: 7   AVVTGSTSGIGLGIATALAAQGADIVLNGF--GDAAEIEKVRAGLAAQHGVKVLYDGADL 64

Query: 132 GDAKAVNKFFSE 143
              +AV      
Sbjct: 65  SKGEAVRGLVDN 76

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 44.4 bits (104), Expect = 4e-06
 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            L+TG A  IG   A   +++  RV I D        A     E+         I  D+ 
Sbjct: 8   ALITGSARGIGRAFAEAYVREGARVAIAD---INLEAARATAAEI---GPAACAIALDVT 61

Query: 133 DAKAVNKFFSE 143
           D  ++++  +E
Sbjct: 62  DQASIDRCVAE 72

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 44.3 bits (104), Expect = 5e-06
 Identities = 15/105 (14%), Positives = 35/105 (33%), Gaps = 11/105 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LV+GGA  +G+     ++ +  +V   D     +     +  EL       ++++ D+ 
Sbjct: 9   ALVSGGARGMGASHVRAMVAEGAKVVFGD---ILDEEGKAMAAEL---ADAARYVHLDVT 62

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNI 172
                                +++ A +  +G      L  +  I
Sbjct: 63  QPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRI 107

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (103), Expect = 6e-06
 Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 8/92 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+TG    IG   A    K   ++ + D       G  +   +      ++     D  
Sbjct: 10  VLITGAGHGIGRLTAYEFAKLKSKLVLWD---INKHGLEETAAKCKGLGAKVHTFVVDCS 66

Query: 133 DAKAVNKFFSENA-----FDAVMHFAAVAYVG 159
           + + +     +          +++ A V Y  
Sbjct: 67  NREDIYSSAKKVKAEIGDVSILVNNAGVVYTS 98

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 43.6 bits (102), Expect = 8e-06
 Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 4/75 (5%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRV----TIVDNLSRGNIGAVKVLQELFPEPGRLQFIY 128
           +L+TG    IG   AL   + +        ++   SR      K+  E   E      I 
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 63

Query: 129 ADLGDAKAVNKFFSE 143
           AD+ D   V +  + 
Sbjct: 64  ADISDMADVRRLTTH 78

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 42.8 bits (100), Expect = 2e-05
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 14/71 (19%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGG   IG   A RL  D ++V +    S                P  L  +  D+ 
Sbjct: 10  VLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS--------------GAPKGLFGVEVDVT 55

Query: 133 DAKAVNKFFSE 143
           D+ AV++ F+ 
Sbjct: 56  DSDAVDRAFTA 66

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 42.5 bits (100), Expect = 2e-05
 Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 14/92 (15%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTGGA  IG   A    ++   V + D          +V + +        F   DL 
Sbjct: 8   VLVTGGARGIGRAIAQAFAREGALVALCDL----RPEGKEVAEAI-----GGAFFQVDLE 58

Query: 133 DAKAVNKFFSE--NAF---DAVMHFAAVAYVG 159
           D +   +F  E   A    D +++ AA+A  G
Sbjct: 59  DERERVRFVEEAAYALGRVDVLVNNAAIAAPG 90

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 42.1 bits (97), Expect = 2e-05
 Identities = 8/29 (27%), Positives = 13/29 (44%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIV 100
            VL+ G  G  G H   R+L +     ++
Sbjct: 4   RVLLAGATGLTGEHLLDRILSEPTLAKVI 32

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 41.9 bits (98), Expect = 2e-05
 Identities = 23/142 (16%), Positives = 48/142 (33%), Gaps = 21/142 (14%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VL+TG A  IG        K+  R+   D          +  + +         +  D+ 
Sbjct: 8   VLITGAAHGIGRATLELFAKEGARLVACD---IEEGPLREAAEAV-----GAHPVVMDVA 59

Query: 133 DAKAVNKFFSE-----NAFDAVMHFAAVAYVG---ESTLDPLKYYHNITSN-----TLVV 179
           D  +V + F+E        D V+H+A +       +  L+  +    +            
Sbjct: 60  DPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAA 119

Query: 180 LESMARHGVDTLIYSSTCATYG 201
            E+M      +++ +++    G
Sbjct: 120 SEAMREKNPGSIVLTASRVYLG 141

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 41.8 bits (97), Expect = 4e-05
 Identities = 18/100 (18%), Positives = 40/100 (40%), Gaps = 11/100 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           V+VTG    IG     +L+KD     I+   +R ++     L+ +  +  R+  +   + 
Sbjct: 6   VVVTGANRGIGLGLVQQLVKDKNIRHIIA-TAR-DVEKATELKSI--KDSRVHVLPLTVT 61

Query: 133 DAKAVNKF-------FSENAFDAVMHFAAVAYVGESTLDP 165
             K+++ F          +    +++ A V     +  +P
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEP 101

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 41.5 bits (97), Expect = 5e-05
 Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 8/95 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVD------NLSRGNIGAVKVLQELFPEPGRLQF 126
           VLVTG  G +G   AL   +    V + D       + +G+  A KV++E+    G+   
Sbjct: 10  VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVA 69

Query: 127 IYADLGDAKAVNKFFSEN--AFDAVMHFAAVAYVG 159
            Y  +   + + K   +     D V++ A +    
Sbjct: 70  NYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDR 104

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (95), Expect = 8e-05
 Identities = 32/146 (21%), Positives = 48/146 (32%), Gaps = 15/146 (10%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR---GNIGAVKVLQELFPEPGRLQFIYA 129
           VL+TG +  IG H A+RL  D  +   V    R         +  + L   PG L+ +  
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 130 DLGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYY--------HNITSNTLV--- 178
           D+ D+K+V           V      A +G                   N+     +   
Sbjct: 65  DVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQA 124

Query: 179 VLESMARHGVDTLIY-SSTCATYGEP 203
            L  M R G   ++   S     G P
Sbjct: 125 FLPDMKRRGSGRVLVTGSVGGLMGLP 150

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 40.8 bits (95), Expect = 8e-05
 Identities = 16/97 (16%), Positives = 30/97 (30%), Gaps = 14/97 (14%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            +VT    + G  +ALRL +  + V   D        + K   EL  E     +      
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDE-------SFKQKDEL--EAFAETYPQLKPM 53

Query: 133 DAKAVNKFFSE--NAF---DAVMHFAAVAYVGESTLD 164
             +   +      +A+   D ++     A   +    
Sbjct: 54  SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDK 90

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 1e-04
 Identities = 28/181 (15%), Positives = 57/181 (31%), Gaps = 18/181 (9%)

Query: 73  VLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
            LVTGG   IG      L +     V +     R        +Q+L  E    +F   D+
Sbjct: 6   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTA---RDVTRGQAAVQQLQAEGLSPRFHQLDI 62

Query: 132 GDAKAVNKFFS-----ENAFDAVMHFAAVAYVGES-TLDPLKYYHNITSN-------TLV 178
            D +++              D +++ A +A+     T   ++    + +N          
Sbjct: 63  DDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTE 122

Query: 179 VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNS 238
           +L  +   G    + SS  +        P  ++  ++      +   +    + D  K  
Sbjct: 123 LLPLIKPQGRVVNV-SSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGV 181

Query: 239 D 239
            
Sbjct: 182 H 182

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (92), Expect = 1e-04
 Identities = 5/28 (17%), Positives = 10/28 (35%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIV 100
           V + G +G  G      +L+      + 
Sbjct: 17  VFILGASGETGRVLLKEILEQGLFSKVT 44

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 40.0 bits (93), Expect = 1e-04
 Identities = 12/72 (16%), Positives = 26/72 (36%), Gaps = 1/72 (1%)

Query: 72  HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL 131
           +V+     G IG   +  L+K + +  ++ +    N  A+  L+ + P+       Y   
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE-NPTALAELKAINPKVNITFHTYDVT 65

Query: 132 GDAKAVNKFFSE 143
                  K   +
Sbjct: 66  VPVAESKKLLKK 77

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.4 bits (91), Expect = 2e-04
 Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 6/81 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           VLV GG G +GS         ++ V  +D +      A  +++       +   + A   
Sbjct: 5   VLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTA--- 61

Query: 133 DAKAVNKFFSENAFDAVMHFA 153
               V K   +   DA++  A
Sbjct: 62  ---EVGKLLGDQKVDAILCVA 79

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 39.1 bits (90), Expect = 3e-04
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 4/79 (5%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADL 131
            ++TGGA  IG   A+RL +  +RV +    S G   A +++ EL     G       DL
Sbjct: 4   AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEG--AAQRLVAELNAARAGSAVLCKGDL 61

Query: 132 GDAKAVNKFFSENAFDAVM 150
             + ++     E+  D   
Sbjct: 62  SLSSSLLDCC-EDIIDCSF 79

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.2 bits (88), Expect = 5e-04
 Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 2/88 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEP--GRLQFIYAD 130
            ++TG +   G   A +L +     +++   +R      ++ +EL  +    ++    AD
Sbjct: 9   CVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAAD 68

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYV 158
           LG    V +  S               +
Sbjct: 69  LGTEAGVQRLLSAVRELPRPEGLQRLLL 96

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 37.9 bits (87), Expect = 6e-04
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVD 101
           V+V GG G +GS       K+ Y V  +D
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNID 33

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 37.2 bits (85), Expect = 0.001
 Identities = 17/88 (19%), Positives = 34/88 (38%), Gaps = 14/88 (15%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           ++++G A  IG+     L    +++  +D      I   +V+ +L    GR Q I     
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGID------IRDAEVIADLSTAEGRKQAI----- 52

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGE 160
            A  + K       D ++  A +    +
Sbjct: 53  -ADVLAKCS--KGMDGLVLCAGLGPQTK 77

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 37.0 bits (85), Expect = 0.001
 Identities = 13/69 (18%), Positives = 22/69 (31%), Gaps = 6/69 (8%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG +  IG   A  L     +V           GA  +   L       + +  ++ 
Sbjct: 7   ALVTGASRGIGRAIAETLAARGAKVIGTA---TSENGAQAISDYL---GANGKGLMLNVT 60

Query: 133 DAKAVNKFF 141
           D  ++    
Sbjct: 61  DPASIESVL 69

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 37.3 bits (85), Expect = 0.001
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 1/81 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNI-GAVKVLQELFPEPGRLQFIYADL 131
           VLVTGG G +G   A  L +      ++ + S  +  GA +++ EL     R      D+
Sbjct: 12  VLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDV 71

Query: 132 GDAKAVNKFFSENAFDAVMHF 152
            D ++V +       D  +  
Sbjct: 72  TDRESVRELLGGIGDDVPLSA 92

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 37.1 bits (85), Expect = 0.001
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 15/80 (18%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTGGA  +G  AAL L    YRV ++D               L  E   L ++  D+ 
Sbjct: 4   ALVTGGASGLGRAAALALKARGYRVVVLD---------------LRREGEDLIYVEGDVT 48

Query: 133 DAKAVNKFFSENAFDAVMHF 152
             + V +  +    +A +  
Sbjct: 49  REEDVRRAVARAQEEAPLFA 68

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 36.8 bits (84), Expect = 0.002
 Identities = 17/101 (16%), Positives = 35/101 (34%), Gaps = 6/101 (5%)

Query: 73  VLVTGGAGY--IGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
           +LVTG A    I    A  + ++   +         N      ++E   + G    +  D
Sbjct: 8   ILVTGVASKLSIAYGIAQAMHREGAELAFTYQ----NDKLKGRVEEFAAQLGSDIVLQCD 63

Query: 131 LGDAKAVNKFFSENAFDAVMHFAAVAYVGESTLDPLKYYHN 171
           + +  +++  F+E           V  +G +  D L   + 
Sbjct: 64  VAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYV 104

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (84), Expect = 0.002
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVD 101
            ++TGGA  +G   A RL+       ++D
Sbjct: 8   AVITGGASGLGLATAERLVGQGASAVLLD 36

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 0.002
 Identities = 22/145 (15%), Positives = 40/145 (27%), Gaps = 17/145 (11%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADL 131
           V+VTG +  IG   A  L K    V +     R      KV+            +I   +
Sbjct: 17  VIVTGASKGIGREMAYHLAKMGAHVVVTA---RSKETLQKVVSHCLELGAASAHYIAGTM 73

Query: 132 GDAKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLV-------- 178
            D     +F ++        D ++             D + +         +        
Sbjct: 74  EDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVA 133

Query: 179 VLESMARHGVDTLIYSSTCATYGEP 203
            L  + +     ++ SS       P
Sbjct: 134 ALPMLKQSNGSIVVVSSLAGKVAYP 158

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 36.6 bits (83), Expect = 0.002
 Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 1/72 (1%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
           +L+TG    +G      LL        +    R N    K L++L      +  +  DL 
Sbjct: 5   ILITGCNRGLGLGLVKALLNLPQPPQHLFTTCR-NREQAKELEDLAKNHSNIHILEIDLR 63

Query: 133 DAKAVNKFFSEN 144
           +  A +K  ++ 
Sbjct: 64  NFDAYDKLVADI 75

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 36.2 bits (83), Expect = 0.002
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVD 101
           VLV   +  IG   A  L ++   VTI  
Sbjct: 7   VLVLAASRGIGRAVADVLSQEGAEVTICA 35

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 36.6 bits (83), Expect = 0.002
 Identities = 17/92 (18%), Positives = 25/92 (27%), Gaps = 2/92 (2%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG 132
            LVTG A  +G   A  L  + Y V +  +  R    A  +   L               
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYH--RSAAEANALSATLNARRPNSAITVQADL 62

Query: 133 DAKAVNKFFSENAFDAVMHFAAVAYVGESTLD 164
              A       +    V  F   A +  +   
Sbjct: 63  SNVATAPVSGADGSAPVTLFTRCAELVAACYT 94

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 0.002
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 73  VLVTGGAGYIGSHAALRLLKDSYRVTIVD 101
           +++T  A  IG  AAL   ++  +V   D
Sbjct: 9   IILTAAAQGIGQAAALAFAREGAKVIATD 37

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 36.0 bits (82), Expect = 0.003
 Identities = 13/75 (17%), Positives = 24/75 (32%), Gaps = 6/75 (8%)

Query: 73  VLVTGGAGY--IGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD 130
            LV G      +G   A +L +    V +     R         ++L    G      AD
Sbjct: 11  ALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER----LRPEAEKLAEALGGALLFRAD 66

Query: 131 LGDAKAVNKFFSENA 145
           +   + ++  F+   
Sbjct: 67  VTQDEELDALFAGVK 81

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	267
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.98
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.97
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.97
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.97
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.97
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.97
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.97
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.97
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.97
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.97
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.97
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.97
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.97
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.97
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.97
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.97
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.97
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.97
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.97
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.97
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.97
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.97
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.97
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.97
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.97
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.97
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.97
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.96
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.96
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.96
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.96
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.96
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.96
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.96
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.96
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.96
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.96
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.96
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.96
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.96
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.96
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.96
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.96
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.96
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.96
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.96
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.96
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.95
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.95
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.95
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.95
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.95
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.95
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.95
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.95
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.95
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.95
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.95
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.94
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.94
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.94
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.94
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.94
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.94
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.94
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.93
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.93
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.93
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.93
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.92
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.92
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.92
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.91
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.91
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.91
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.9
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.89
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.88
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.88
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.88
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.87
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.86
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.86
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.85
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.84
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.84
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.81
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.81
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.8
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.8
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.73
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.7
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.65
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.59
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.3
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.27
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.25
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.25
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.19
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.11
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.09
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.06
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.04
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.03
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.03
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.97
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.95
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.89
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.88
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.87
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.86
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.84
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.82
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.8
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.76
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.76
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.75
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.73
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.66
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.64
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.62
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.6
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.59
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.57
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.56
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.54
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.51
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.47
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.47
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.44
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.43
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.42
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.38
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.36
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.33
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.32
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.27
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.24
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.22
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.21
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.2
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.13
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.09
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.08
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.07
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.04
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.97
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.93
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.88
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.88
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.74
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.7
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.67
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.66
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.57
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.5
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.48
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.46
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	96.44
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.4
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.3
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.2
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	96.19
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.18
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	96.11
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.09
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.08
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	96.07
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.05
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	95.93
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.91
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	95.9
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.89
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	95.89
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.86
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.83
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.75
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.74
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.74
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.74
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.72
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.69
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.68
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.66
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	95.64
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.62
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.6
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.47
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.44
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.39
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.37
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.36
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.29
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.28
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	95.25
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.1
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.08
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.94
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	94.89
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	94.72
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.7
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	94.68
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.66
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	94.65
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.65
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	94.63
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.56
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.49
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	94.45
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	94.4
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.34
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.29
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	94.21
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	94.12
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.1
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	94.1
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	93.91
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.75
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	93.74
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.62
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	93.54
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.48
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	93.45
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	93.43
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	93.35
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.32
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.19
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	93.13
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.11
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	92.97
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	92.93
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	92.89
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	92.89
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	92.81
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	92.8
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	92.57
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	92.57
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	92.49
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	92.31
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	92.17
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	92.11
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	92.04
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	91.98
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	91.73
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	91.62
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	91.54
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	91.41
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	91.31
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	91.11
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	91.01
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	90.92
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	90.75
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	90.55
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	90.49
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	90.43
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	90.31
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	90.09
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	89.98
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	89.8
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	89.71
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	89.65
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.48
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	89.42
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	89.24
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	89.08
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	88.96
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	88.81
d1jyea_	271	Lac-repressor (lacR) core (C-terminal domain) {Esc	88.8
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	88.54
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	88.4
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	88.13
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	87.96
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	87.5
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	87.31
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	87.12
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	87.11
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	86.95
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	86.93
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	86.7
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	86.59
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	86.3
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	86.17
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	86.1
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	86.03
d2afhe1	289	Nitrogenase iron protein {Azotobacter vinelandii [	85.95
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	85.7
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	85.45
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	85.26
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	85.12
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	85.06
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	85.06
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	85.02
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	84.97
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	84.94
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	84.75
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	83.62
d1q7ea_	417	Hypothetical protein YfdW {Escherichia coli [TaxId	83.59
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	83.48
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	83.34
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	83.15
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	82.87
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	82.15
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	82.11
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	82.02
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	81.84
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	81.76
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	81.34
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	81.33
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	81.19
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	80.97
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	80.87
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	80.73
d1x74a1	359	2-methylacyl-CoA racemase Mcr {Mycobacterium tuber	80.37

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.7e-33  Score=245.63  Aligned_cols=186  Identities=24%  Similarity=0.250  Sum_probs=155.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC--CCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR--GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      |+||||||||+||++|+++|+++|++|++++|...  +...+.....+......+++++++|++|.++++++++...+|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            89999999999999999999999999999998532  1222222222222234589999999999999999998777899


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC---CEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHH
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV---DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKK  225 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~  225 (267)
                      |||+|+........++++..++.|+.+|.++++++++.+.   .+||++||.++||.....+++|+++..|.++|+.||.
T Consensus        82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~  161 (357)
T d1db3a_          82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKL  161 (357)
T ss_dssp             EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHH
T ss_pred             EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHH
Confidence            9999999877777888999999999999999999998653   4799999999999888889999999999999999999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          226 MAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       226 a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      ++|.+++.++++++++++++||+       ++|||+..
T Consensus       162 ~~E~~~~~~~~~~~l~~~ilR~~-------~vyGp~~~  192 (357)
T d1db3a_         162 YAYWITVNYRESYGMYACNGILF-------NHESPRRG  192 (357)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEEC-------CEECTTSC
T ss_pred             HHHHHHHHHHHHhCCCEEEEEec-------cccCCCCC
Confidence            99999999999999999999999       99999754

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.98  E-value=1.6e-31  Score=222.69  Aligned_cols=172  Identities=15%  Similarity=0.160  Sum_probs=137.7

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +.+ |++|||||++|||+++|+.|+++|++|++++|+.  .+...+.+++.   +.++.++.+|++|++++++++++   
T Consensus         3 L~g-KvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~--~~~~~~~~~~~---g~~~~~~~~Dvs~~~~v~~~~~~~~~   76 (247)
T d2ew8a1           3 LKD-KLAVITGGANGIGRAIAERFAVEGADIAIADLVP--APEAEAAIRNL---GRRVLTVKCDVSQPGDVEAFGKQVIS   76 (247)
T ss_dssp             TTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--CHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCc--hHHHHHHHHHc---CCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            455 9999999999999999999999999999999743  23333333333   56899999999999999998876   


Q ss_pred             --CCCCEEEEccccCCcCCCccChHHHHH----HhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                        +++|+||||||+....+.++.+++.|+    .|+.+    ++.++|.|++++.++||++||.+...           +
T Consensus        77 ~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~-----------~  145 (247)
T d2ew8a1          77 TFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL-----------K  145 (247)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS-----------C
T ss_pred             HcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcc-----------c
Confidence              799999999999766665554555444    44444    66789999999889999999987762           5


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      .+...+|++||++++.|++.++.|   +|+++++|.||+|.|...
T Consensus       146 ~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~  190 (247)
T d2ew8a1         146 IEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATT  190 (247)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-----
T ss_pred             CcccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccc
Confidence            556789999999999999999998   689999999999988554

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.97  E-value=2.2e-31  Score=222.34  Aligned_cols=171  Identities=13%  Similarity=0.078  Sum_probs=140.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      .|++|||||++|||+++|++|+++|++|++++|+   .+.+.+..+++...+.++.++.+|++|++++++++++     +
T Consensus        10 nKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~---~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g   86 (251)
T d2c07a1          10 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRT---QKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK   86 (251)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESS---HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC---HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4999999999999999999999999999999964   3445555555545567899999999999999998886     7


Q ss_pred             CCCEEEEccccCCcCCCccChHHHHHH----hHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLKYYHN----ITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~~~~~----~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||.....+..+.+.+.|+.    |+.+    ++.++|.|++++.++||++||.+.+-           +.+.
T Consensus        87 ~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~-----------~~~~  155 (251)
T d2c07a1          87 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT-----------GNVG  155 (251)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------CCTT
T ss_pred             CceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcC-----------CCCC
Confidence            999999999987766655555555544    3333    56688999999889999999987762           4556


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..+|++||++++.|++.++.|   +|+++++|.||+|.|..
T Consensus       156 ~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~  196 (251)
T d2c07a1         156 QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDM  196 (251)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccc
Confidence            789999999999999999998   68999999999888754

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.97  E-value=7.6e-31  Score=218.00  Aligned_cols=171  Identities=15%  Similarity=0.175  Sum_probs=140.7

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +.+ |++|||||++|||+++|++|+++|++|++++|+.   +++.+..+++   +.++.++++|++|++++++++++   
T Consensus         4 L~g-K~alITGas~GIG~aia~~la~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   76 (244)
T d1nffa_           4 LTG-KVALVSGGARGMGASHVRAMVAEGAKVVFGDILD---EEGKAMAAEL---ADAARYVHLDVTQPAQWKAAVDTAVT   76 (244)
T ss_dssp             TTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHT---GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHh---hCcceEEEeecCCHHHHHHHHHHHHH
Confidence            445 9999999999999999999999999999999643   4444444444   34788999999999999998876   


Q ss_pred             --CCCCEEEEccccCCcCCCccChHHHHH----HhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                        +++|+||||||.....+.++.+.+.|+    .|+.+    ++.++|.|.+++.++||++||.+.+.           +
T Consensus        77 ~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~-----------~  145 (244)
T d1nffa_          77 AFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA-----------G  145 (244)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------C
T ss_pred             HhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccc-----------c
Confidence              789999999998776666555555554    44444    55688899998889999999988762           4


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      .+....|+++|++++.|++.++.|   +|++++.|.||+|.|...
T Consensus       146 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~  190 (244)
T d1nffa_         146 TVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMT  190 (244)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGG
T ss_pred             cccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhH
Confidence            556789999999999999999998   689999999999988654

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.97  E-value=3e-31  Score=222.76  Aligned_cols=173  Identities=17%  Similarity=0.086  Sum_probs=137.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcC-CCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      +|++|||||++|||+++|++|+++|++|++++|+.  .+.+.+..+++. ..+.++.++++|++|++++++++++     
T Consensus         4 gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~--~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           4 GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGD--AAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSC--HHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCc--HHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            39999999999999999999999999999999743  222222222221 1245789999999999999999876     


Q ss_pred             CCCCEEEEccccCCcCCCccChHHHHH----HhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      +++|+||||||+....+.++.+++.|+    .|+.+    ++.++|.|++++.++||++||.+...           +.+
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~-----------~~~  150 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV-----------ASA  150 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCT
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeeccccccee-----------ccC
Confidence            799999999999876665555555554    44444    56689999999889999999987762           556


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ...+|++||++++.|++.++.|   +|+++++|.||+|.|...
T Consensus       151 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~  193 (260)
T d1x1ta1         151 NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLV  193 (260)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---
T ss_pred             CcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhh
Confidence            6789999999999999999998   689999999999988543

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.97  E-value=7.5e-31  Score=220.23  Aligned_cols=172  Identities=15%  Similarity=0.129  Sum_probs=138.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||++|||+++|++|+++|++|++++|+.  .+.+.+..+++...+.++.++++|++|+++++++++.     +
T Consensus         7 gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~--~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   84 (261)
T d1geea_           7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSK--EDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc--HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            49999999999999999999999999999999743  2233333344434466889999999999999998876     7


Q ss_pred             CCCEEEEccccCCcCCCccChHHHHH----HhHHH----HHHHHHHHHHcCC-CEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGV-DTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~~l~~~~~~~~-~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||+..+.+..+.+.+.|+    .|+.+    ++.++|.|.+++. ++||++||.+...           +.+
T Consensus        85 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~-----------~~~  153 (261)
T d1geea_          85 KLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI-----------PWP  153 (261)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS-----------CCT
T ss_pred             CCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcc-----------cCc
Confidence            99999999999776665555555444    44444    5668899988764 4699999987752           556


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...+|++||++++.|+++++.|   +|+++++|.||+|.|..
T Consensus       154 ~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~  195 (261)
T d1geea_         154 LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPI  195 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGG
T ss_pred             cccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHh
Confidence            6789999999999999999998   68999999999988854

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.97  E-value=9.3e-31  Score=218.69  Aligned_cols=169  Identities=17%  Similarity=0.169  Sum_probs=140.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||++|||+++|++|+++|++|++++|+   .+++.+..+++   +.++.++++|++|+++++++++.     +
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~---~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (254)
T d1hdca_           5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVL---DEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHcC
Confidence            4999999999999999999999999999999964   34455554444   45789999999999999998876     7


Q ss_pred             CCCEEEEccccCCcCCCccChHHHHH----HhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+....+..+..++.|+    .|+.+    ++.++|.|++++.++||++||.+.+.           +.+.
T Consensus        79 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~-----------~~~~  147 (254)
T d1hdca_          79 SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM-----------GLAL  147 (254)
T ss_dssp             CCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTT
T ss_pred             CccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcc-----------cccc
Confidence            99999999999776665555555444    44444    56688999988889999999988762           5566


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ..+|++||++++.|++.++.|   +|+++++|.||+|.|.+.
T Consensus       148 ~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~  189 (254)
T d1hdca_         148 TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT  189 (254)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccc
Confidence            789999999999999999998   689999999999987543

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.97  E-value=6.6e-31  Score=220.63  Aligned_cols=173  Identities=16%  Similarity=0.118  Sum_probs=140.6

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +.+ |++|||||++|||+++|++|+++|++|++++|+   .+.+.+..+++...+.++.++.+|++|+++++++++.   
T Consensus         3 L~g-K~alITGas~GIG~aia~~la~~Ga~V~~~~r~---~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (260)
T d1zema1           3 FNG-KVCLVTGAGGNIGLATALRLAEEGTAIALLDMN---REALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVR   78 (260)
T ss_dssp             TTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            345 999999999999999999999999999999964   3444444455545567899999999999999999877   


Q ss_pred             --CCCCEEEEccccCCc-CCCccChHHHHH----HhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYV-GESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~-~~~~~~~~~~~~----~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                        +++|+||||||.... .+..+.+++.|+    .|+.+    ++.++|.|.+++.++||++||.+.+.           
T Consensus        79 ~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~-----------  147 (260)
T d1zema1          79 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK-----------  147 (260)
T ss_dssp             HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS-----------
T ss_pred             HhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhcc-----------
Confidence              799999999997643 444444444444    44444    56688999988889999999987762           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +.+...+|++||++++.|++.++.|   +|++++.|.||+|.|.+
T Consensus       148 ~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~  192 (260)
T d1zema1         148 GPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGF  192 (260)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcc
Confidence            4556789999999999999999998   68999999999888743

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.97  E-value=9.1e-31  Score=219.42  Aligned_cols=174  Identities=16%  Similarity=0.189  Sum_probs=137.9

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      .+ |++|||||++|||+++|++|+++|++|++++|+....++..+.+.+. ..+.++.++++|++|++++++++++    
T Consensus         3 ~g-K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~-~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           3 TD-RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLET-APDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             TT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-CTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh-CCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            44 99999999999999999999999999999997543333333333332 2345788999999999999998876    


Q ss_pred             -CCCCEEEEccccCCc-CCCccChHHHH----HHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYV-GESTLDPLKYY----HNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~-~~~~~~~~~~~----~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                       +++|+||||||+... .+.++.+++.|    +.|+.+    ++.++|.|++++.++||++||.+.+-           +
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~-----------~  149 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR-----------G  149 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------B
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhcc-----------C
Confidence             799999999997643 33444344444    445444    55688889988899999999987752           4


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .+...+|++||++++.|++.++.|   +||++++|.||+|.|.+
T Consensus       150 ~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~  193 (258)
T d1iy8a_         150 IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPM  193 (258)
T ss_dssp             CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHH
Confidence            556889999999999999999998   68999999999988743

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=9.6e-31  Score=218.92  Aligned_cols=173  Identities=14%  Similarity=0.161  Sum_probs=139.9

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +.+ |++|||||++|||+++|++|+++|++|++++|+.   +++.+..+++...+.++.++++|++|+++++++++.   
T Consensus         9 L~g-K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~---~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~   84 (255)
T d1fmca_           9 LDG-KCAIITGAGAGIGKEIAITFATAGASVVVSDINA---DAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             CTT-CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCH---HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            445 9999999999999999999999999999999644   444444444444467899999999999999998876   


Q ss_pred             --CCCCEEEEccccCCcCCCccChHH---HHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYVGESTLDPLK---YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~~~~~~~~~~---~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                        +++|+||||||+......+...++   .++.|+.+    ++.++|.|.+++.++||++||.+.+.           +.
T Consensus        85 ~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~-----------~~  153 (255)
T d1fmca_          85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN-----------KN  153 (255)
T ss_dssp             HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------CC
T ss_pred             HcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhc-----------cc
Confidence              799999999998765554333222   33445444    56688999999889999999987762           55


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...+|++||++++.|++.++.|   +|+++++|.||+|.|..
T Consensus       154 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~  196 (255)
T d1fmca_         154 INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDA  196 (255)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred             cccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChH
Confidence            66889999999999999999998   78999999999888743

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=6.4e-31  Score=218.49  Aligned_cols=168  Identities=14%  Similarity=0.089  Sum_probs=138.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++||||++|||+++|++|+++|++|++++|+   .+.+.+..+++   +.+...+.+|++|+++++++++.     +
T Consensus         4 gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~---~~~l~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (243)
T d1q7ba_           4 GKIALVTGASRGIGRAIAETLAARGAKVIGTATS---ENGAQAISDYL---GANGKGLMLNVTDPASIESVLEKIRAEFG   77 (243)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHHh---CCCCcEEEEEecCHHHhhhhhhhhhcccC
Confidence            3999999999999999999999999999999964   33444444444   34678899999999999998886     7


Q ss_pred             CCCEEEEccccCCcCCCccChHHHHH----HhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||.....+..+.+.+.|+    .|+.+    ++.++|.|++++.++||++||.+.+-           +.+.
T Consensus        78 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~-----------~~~~  146 (243)
T d1q7ba_          78 EVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTM-----------GNGG  146 (243)
T ss_dssp             SCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------CCTT
T ss_pred             CcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcC-----------CCCC
Confidence            89999999998777665555555444    44444    66789999998889999999987762           4556


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..+|++||++++.|+++++.|   +|+++++|.||+|.|..
T Consensus       147 ~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~  187 (243)
T d1q7ba_         147 QANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDM  187 (243)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechh
Confidence            789999999999999999998   68999999999888743

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.97  E-value=3.9e-31  Score=219.96  Aligned_cols=171  Identities=16%  Similarity=0.101  Sum_probs=138.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      ++||||||++|||+++|++|+++|++|++.++  ++.+.+.+..+++...+.++.++++|++|+++++++++.     ++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~--~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYA--RSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES--SCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC--CCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999874  333333333333333366889999999999999998876     79


Q ss_pred             CCEEEEccccCCcCCCccChHHHHH----HhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      +|+||||||.....+..+.+.+.|+    .|+.+    ++.++|.|++++.++||++||.+.+-           +.+..
T Consensus        80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~-----------~~~~~  148 (244)
T d1edoa_          80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI-----------GNIGQ  148 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------CCTTC
T ss_pred             CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcC-----------CCCCC
Confidence            9999999998776665555555554    44444    66689999998889999999987762           45567


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..|++||++++.|++.++.|   +|+++++|.||+|.|..
T Consensus       149 ~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~  188 (244)
T d1edoa_         149 ANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDM  188 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred             HHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHH
Confidence            89999999999999999998   68999999999888743

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.97  E-value=1.1e-30  Score=218.19  Aligned_cols=174  Identities=16%  Similarity=0.147  Sum_probs=138.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcC-CCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      .+ |++|||||++|||+++|++|+++|++|++++|+.   +++.+..+++. ..+.++.++++|++|++++++++++   
T Consensus         4 ~g-K~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~---~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (251)
T d1vl8a_           4 RG-RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNL---EEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE   79 (251)
T ss_dssp             TT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            44 9999999999999999999999999999999644   33333333332 1255788999999999999998876   


Q ss_pred             --CCCCEEEEccccCCcCCCccChHHHHH----HhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                        +++|+||||||+....+.++.+.+.|+    .|+.+    ++.++|.|++++.++||++||....-          .+
T Consensus        80 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~----------~~  149 (251)
T d1vl8a_          80 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE----------VT  149 (251)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC----------CC
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcc----------cc
Confidence              799999999998766665555555554    44444    66689999988889999999965431          13


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      .+...+|++||++++.|++.++.|   +|+++++|.||+|.|...
T Consensus       150 ~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~  194 (251)
T d1vl8a_         150 MPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMT  194 (251)
T ss_dssp             SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTT
T ss_pred             CccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHH
Confidence            445678999999999999999998   689999999999988654

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.5e-31  Score=219.35  Aligned_cols=171  Identities=13%  Similarity=0.074  Sum_probs=140.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+++|||||+|||+++|++|+++|++|++++|+.   +++.+..+++...+.++.++.||++|+++++++++.     +
T Consensus         7 Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~---~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g   83 (244)
T d1yb1a_           7 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINK---HGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG   83 (244)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            49999999999999999999999999999999644   444444444444467899999999999999998875     7


Q ss_pred             CCCEEEEccccCCcCCCccChHHHH----HHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLKYY----HNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~~~----~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||........+...+.|    +.|+.+    ++.++|.|.+++.++||++||.+.+           .+.+.
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~-----------~~~~~  152 (244)
T d1yb1a_          84 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGH-----------VSVPF  152 (244)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-C-----------CCHHH
T ss_pred             CCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhc-----------CCCCC
Confidence            8999999999987766555555544    444444    5668999999999999999998876           25555


Q ss_pred             CChHHHHHHHHHHHHHHhhhc------CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN------SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e------~g~~~~~vrp~~v~~~~  254 (267)
                      ...|++||+|++.|+++++.|      .|++++.|.||+|.|.+
T Consensus       153 ~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~  196 (244)
T d1yb1a_         153 LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGF  196 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCS
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChh
Confidence            789999999999999999987      37999999999888854

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.97  E-value=1.3e-30  Score=218.56  Aligned_cols=173  Identities=14%  Similarity=0.103  Sum_probs=140.6

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +.+ |++|||||++|||+++|++|+++|++|++++|+   .+++.+..+++...+.++.++.+|++|++++++++++   
T Consensus         6 L~G-K~alITGas~GIG~aia~~la~~Ga~V~~~~r~---~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d2ae2a_           6 LEG-CTALVTGGSRGIGYGIVEELASLGASVYTCSRN---QKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVAN   81 (259)
T ss_dssp             CTT-CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            344 999999999999999999999999999999964   4455555555544567889999999999999988765   


Q ss_pred             --C-CCCEEEEccccCCcCCCccChHHHH----HHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCC
Q 024488          144 --N-AFDAVMHFAAVAYVGESTLDPLKYY----HNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       144 --~-~~D~li~~Ag~~~~~~~~~~~~~~~----~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                        + ++|+||||||+....+..+.+.+.|    +.|+.+    ++.++|.|.+++.++||++||.+...           
T Consensus        82 ~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~-----------  150 (259)
T d2ae2a_          82 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL-----------  150 (259)
T ss_dssp             HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS-----------
T ss_pred             HhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccc-----------
Confidence              3 6999999999876665554444444    444444    56688999998889999999977752           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +.+....|++||++++.|+++++.|   +|+++++|.||+|.|..
T Consensus       151 ~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~  195 (259)
T d2ae2a_         151 AVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSL  195 (259)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHH
T ss_pred             ccccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHH
Confidence            4556789999999999999999998   58999999999988744

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.6e-30  Score=226.17  Aligned_cols=186  Identities=24%  Similarity=0.235  Sum_probs=154.3

Q ss_pred             cEE-EEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC--CcchhhhhhhcC-CCCCceEEEEccCCCHHHHHHHhhcCCC
Q 024488           71 THV-LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG--NIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAF  146 (267)
Q Consensus        71 k~v-lVTGasggIG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (267)
                      |+| |||||||+||++++++|+++||+|++++|....  ............ ....+++++.+|++|.+.+.++++..++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            455 999999999999999999999999999985432  111221111111 1134789999999999999999987788


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC---CEEEEEeccccccCCCCCCCCCCCCCCCCChHHHH
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV---DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKA  223 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~s  223 (267)
                      ++++|+|+..........+...++.|+.+|.++++++.+.+.   .++|++||.++||.....+++|+++..|.+.|+.|
T Consensus        81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~s  160 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA  160 (347)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred             ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHH
Confidence            999999987665555667788889999999999999998764   48999999999998888889999999999999999


Q ss_pred             HHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          224 KKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       224 K~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      |.++|.+++.++++++++++++||+       ++|||+..
T Consensus       161 K~~aE~~~~~~~~~~~~~~~ilr~~-------~vyGp~~~  193 (347)
T d1t2aa_         161 KLYAYWIVVNFREAYNLFAVNGILF-------NHESPRRG  193 (347)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEEC-------CEECTTSC
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEec-------ceeCCCCC
Confidence            9999999999998899999999999       99999754

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.97  E-value=1.1e-30  Score=216.66  Aligned_cols=171  Identities=15%  Similarity=0.160  Sum_probs=141.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCe-------EEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYR-------VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE  143 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~-------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~  143 (267)
                      ++||||||++|||+++|++|+++|++       |++++|   +.+++.+..+++...+.++.++.+|++|+++++++++.
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r---~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~   78 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSR---TAADLEKISLECRAEGALTDTITADISDMADVRRLTTH   78 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEES---CHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeC---CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            46899999999999999999999997       888885   34445555555555567899999999999999998876


Q ss_pred             -----CCCCEEEEccccCCcCCCccChHHHH----HHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCC
Q 024488          144 -----NAFDAVMHFAAVAYVGESTLDPLKYY----HNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       144 -----~~~D~li~~Ag~~~~~~~~~~~~~~~----~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                           +++|+||||||.....+..+.+.+.|    +.|+.+    ++.++|.|++++.++||++||.+.+.         
T Consensus        79 ~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~---------  149 (240)
T d2bd0a1          79 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK---------  149 (240)
T ss_dssp             HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS---------
T ss_pred             HHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcC---------
Confidence                 78999999999977666555444444    445444    66799999999889999999988763         


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                        +.+....|++||++++.|+++++.|   +|++++.|.||+|.|.+.
T Consensus       150 --~~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~  195 (240)
T d2bd0a1         150 --AFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMW  195 (240)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTT
T ss_pred             --CCCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchh
Confidence              5566889999999999999999988   789999999999998664

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.97  E-value=1.8e-30  Score=216.32  Aligned_cols=165  Identities=19%  Similarity=0.197  Sum_probs=136.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||++|||+++|++|+++|++|++++|+..    ..+..++.     ...++++|++|++++++++++     +
T Consensus         5 GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~----~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~G   75 (248)
T d2d1ya1           5 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE----GKEVAEAI-----GGAFFQVDLEDERERVRFVEEAAYALG   75 (248)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTT----HHHHHHHH-----TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHhcC
Confidence            399999999999999999999999999999997532    22333333     356789999999999998877     7


Q ss_pred             CCCEEEEccccCCcCCCccChHHHHH----HhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      ++|+||||||+..+.+.++.+++.|+    .|+.+    ++.++|.|++++.++||++||.+.+.           +.+.
T Consensus        76 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~-----------~~~~  144 (248)
T d2d1ya1          76 RVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF-----------AEQE  144 (248)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS-----------BCTT
T ss_pred             CCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccc-----------cccc
Confidence            99999999999777665555555554    44444    56789999998889999999988762           4566


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..+|++||++++.|++.++.|   +|+++++|.||+|.|..
T Consensus       145 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~  185 (248)
T d2d1ya1         145 NAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA  185 (248)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCch
Confidence            889999999999999999998   68999999999988743

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=1.8e-30  Score=217.75  Aligned_cols=174  Identities=12%  Similarity=0.069  Sum_probs=129.1

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +++ |++|||||++|||+++|++|+++|++|++++|+   .+++.+..+++...+.++.++.+|++|+++++++++.   
T Consensus         6 Lkg-K~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~---~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d1xq1a_           6 LKA-KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN---EYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS   81 (259)
T ss_dssp             CTT-CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHH
Confidence            345 999999999999999999999999999999964   3445555555444456899999999999999888865   


Q ss_pred             ---CCCCEEEEccccCCcCCCccChHHHH----HHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCC
Q 024488          144 ---NAFDAVMHFAAVAYVGESTLDPLKYY----HNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       144 ---~~~D~li~~Ag~~~~~~~~~~~~~~~----~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                         +++|+||||||+....+..+.+.+.|    +.|+.+    ++.++|.|++++.++||++||.+..-           
T Consensus        82 ~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~-----------  150 (259)
T d1xq1a_          82 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV-----------  150 (259)
T ss_dssp             HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----------------
T ss_pred             HhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccc-----------
Confidence               57999999999876665555444444    445544    56688999998889999999977652           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      +.+....|++||++++.|+++++.|   +|+++++|.||+|.|.+.
T Consensus       151 ~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~  196 (259)
T d1xq1a_         151 SASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLA  196 (259)
T ss_dssp             ----CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----
T ss_pred             cccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHh
Confidence            4556789999999999999999998   689999999999988543

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.97  E-value=2.5e-30  Score=214.78  Aligned_cols=167  Identities=16%  Similarity=0.151  Sum_probs=135.0

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +.+ |++|||||++|||+++|++|+++|++|++++|+   .+++.+..+++     +.+++.+|++|++++++++++   
T Consensus         3 L~g-K~~lITGas~GIG~aia~~l~~~G~~V~~~~r~---~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~   73 (242)
T d1ulsa_           3 LKD-KAVLITGAAHGIGRATLELFAKEGARLVACDIE---EGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALA   73 (242)
T ss_dssp             TTT-CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHH
Confidence            345 999999999999999999999999999999964   33444443333     467899999999999998876   


Q ss_pred             --CCCCEEEEccccCCcCCCccChHHHHH----HhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                        +++|+||||||+....+.++.+++.|+    .|+.+    ++.++|.|.+++.++++++||.+..            +
T Consensus        74 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~------------~  141 (242)
T d1ulsa_          74 HLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYL------------G  141 (242)
T ss_dssp             HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGG------------C
T ss_pred             hcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccccc------------C
Confidence              789999999999776665555555444    44444    5568888888888888888886654            3


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .+...+|++||++++.|++.++.|   +|+++++|.||+|.|..
T Consensus       142 ~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~  185 (242)
T d1ulsa_         142 NLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRM  185 (242)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChh
Confidence            455789999999999999999998   68999999999888754

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.97  E-value=1.2e-30  Score=218.74  Aligned_cols=171  Identities=17%  Similarity=0.139  Sum_probs=136.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||++|||+++|++|+++|++|++++|+   .+++.+..+++...+.++.++++|++|+++++++++.     +
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~---~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARG---EEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   78 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            4899999999999999999999999999999964   3444444455444466899999999999999998876     7


Q ss_pred             CCCEEEEccccCCcCCCccChHHH----HHHhHHHHH----HHHHH--HHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLKY----YHNITSNTL----VVLES--MARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~~----~~~~~~~~~----~~l~~--~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      ++|+||||||+....+..+..++.    ++.|+.++.    .++|.  |.+++.++||++||.+.+-           +.
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~-----------~~  147 (257)
T d2rhca1          79 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ-----------GV  147 (257)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTS-----------CC
T ss_pred             CCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccc-----------cc
Confidence            899999999987666555444444    445555544    45554  4556678999999987762           55


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...+|++||++++.|++.++.|   +|+++++|.||+|.|..
T Consensus       148 ~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~  190 (257)
T d2rhca1         148 VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPM  190 (257)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHH
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHH
Confidence            66889999999999999999998   57999999999888743

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.97  E-value=3.5e-30  Score=215.67  Aligned_cols=170  Identities=19%  Similarity=0.135  Sum_probs=137.8

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +.+ |++|||||++|||+++|++|+++|++|++++|   +.+++.+..+++   +.++.++++|++|+++++++++.   
T Consensus         3 L~g-K~alVTGas~GIG~aia~~la~~Ga~V~~~~r---~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~   75 (256)
T d1k2wa_           3 LDG-KTALITGSARGIGRAFAEAYVREGARVAIADI---NLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLD   75 (256)
T ss_dssp             TTT-EEEEEETCSSHHHHHHHHHHHHTTEEEEEEES---CHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---CHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHH
Confidence            345 99999999999999999999999999999996   344555555555   45788999999999999999887   


Q ss_pred             --CCCCEEEEccccCCcCCCccChHHHH----HHhHHH----HHHHHHHHHHc-CCCEEEEEeccccccCCCCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYVGESTLDPLKYY----HNITSN----TLVVLESMARH-GVDTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~~~~~~~~~~~~----~~~~~~----~~~~l~~~~~~-~~~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                        +++|+||||||+....+..+...+.|    +.|+.+    ++.+++.|.++ ..++||++||.+.+           .
T Consensus        76 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~-----------~  144 (256)
T d1k2wa_          76 RWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGR-----------R  144 (256)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT-----------S
T ss_pred             HhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhc-----------c
Confidence              79999999999876665554444444    445544    44567766554 46899999998776           2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +.+...+|++||++++.|++.++.|   +|+++++|.||+|.|..
T Consensus       145 ~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~  189 (256)
T d1k2wa_         145 GEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEH  189 (256)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred             ccccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchh
Confidence            5566889999999999999999988   68999999999888754

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.97  E-value=5.7e-30  Score=213.76  Aligned_cols=172  Identities=17%  Similarity=0.216  Sum_probs=138.5

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +.+ |++|||||++|||+++|++|+++|++|++++|+   .+.+.+..+++ ..+.++.++.+|++|+++++++++.   
T Consensus         4 L~g-K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~---~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (251)
T d1zk4a1           4 LDG-KVAIITGGTLGIGLAIATKFVEEGAKVMITGRH---SDVGEKAAKSV-GTPDQIQFFQHDSSDEDGWTKLFDATEK   78 (251)
T ss_dssp             TTT-CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHH-CCTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHh-CCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            345 999999999999999999999999999999964   34444444444 3356899999999999999998887   


Q ss_pred             --CCCCEEEEccccCCcCCCccChHHHHH----HhHHH----HHHHHHHHHHcCC-CEEEEEeccccccCCCCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGV-DTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~~l~~~~~~~~-~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                        +++|+||||||.....+..+.+++.|+    .|+.+    ++.++|.|++++. ++||++||.+.+-           
T Consensus        79 ~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~-----------  147 (251)
T d1zk4a1          79 AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV-----------  147 (251)
T ss_dssp             HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS-----------
T ss_pred             HhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceec-----------
Confidence              899999999999877666655555554    44444    5668888888775 4899999987752           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKN-----SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e-----~g~~~~~vrp~~v~~~~  254 (267)
                      +.+....|++||++++.|++.++.|     +|++++.|.||+|.|..
T Consensus       148 ~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~  194 (251)
T d1zk4a1         148 GDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPL  194 (251)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHH
T ss_pred             cCCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChh
Confidence            4556789999999999999999865     58999999999888743

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.97  E-value=4.6e-30  Score=212.43  Aligned_cols=161  Identities=18%  Similarity=0.179  Sum_probs=128.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      ++ |++|||||++|||+++|++|+++|++|++++|+...              ..++..+++|++|++++++++++    
T Consensus         6 ~g-K~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~--------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~   70 (237)
T d1uzma1           6 VS-RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA--------------PKGLFGVEVDVTDSDAVDRAFTAVEEH   70 (237)
T ss_dssp             CC-CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC--------------CTTSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch--------------hcCceEEEEecCCHHHHHHHHHHHHHh
Confidence            44 999999999999999999999999999999975422              23567799999999999998877    


Q ss_pred             -CCCCEEEEccccCCcCCCccChHHHH----HHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYVGESTLDPLKYY----HNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~~~~~~~~~~~----~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                       +++|+||||||+....+..+.+++.|    +.|+.+    ++.++|.|.+++.++||++||.+...           +.
T Consensus        71 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~-----------~~  139 (237)
T d1uzma1          71 QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW-----------GI  139 (237)
T ss_dssp             HSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC---------------
T ss_pred             cCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhcc-----------CC
Confidence             78999999999876665555444444    445444    56688999999989999999977752           44


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +...+|++||++++.|++.++.|   +|+++++|.||+|.|..
T Consensus       140 ~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~  182 (237)
T d1uzma1         140 GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDM  182 (237)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChh
Confidence            56789999999999999999998   68999999999888743

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=8e-30  Score=221.55  Aligned_cols=184  Identities=35%  Similarity=0.634  Sum_probs=154.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||+|+||++|+++|+++|++|++++|..+.........+...  ..++.++++|++|.+.+.++++..++|+||
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi   78 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDHAIDTVI   78 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc--CCCCEEEEeecCCHHHHHHHHhccCCCEEE
Confidence            459999999999999999999999999999976655554444433332  347899999999999999999887899999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCC-CCCCCChHHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET-PQAPINPYGKAKKMAED  229 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~-~~~~~~~Y~~sK~a~e~  229 (267)
                      |+|+.........++++.++.|+.+++++++++++.+.+++|++||.++|+.....+..|.. ...|...|+.+|.+.|.
T Consensus        79 HlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~  158 (338)
T d1udca_          79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQ  158 (338)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHH
T ss_pred             ECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhH
Confidence            99997655555667889999999999999999999999999999999999866655555444 55689999999999999


Q ss_pred             HHHHhhhc-CCCcEEEEeccccccccceeecCCCC
Q 024488          230 IILDFSKN-SDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       230 l~~~~a~e-~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      ++..+..+ .+++++++||+       ++|||++.
T Consensus       159 ~~~~~~~~~~~~~~~ilR~~-------~v~G~~~~  186 (338)
T d1udca_         159 ILTDLQKAQPDWSIALLRYF-------NPVGAHPS  186 (338)
T ss_dssp             HHHHHHHHSTTCEEEEEEEC-------EEECCCTT
T ss_pred             HHHHHHhhccCCeEEEEeec-------cEEeccCC
Confidence            99976665 68999999999       88888654

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.97  E-value=3.9e-30  Score=215.28  Aligned_cols=170  Identities=21%  Similarity=0.193  Sum_probs=136.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~  145 (267)
                      |++|||||++|||+++|++|+++|++|++++|+.   +++.+..+++...+.++.++++|++|+++++++++.     ++
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~---~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYND---ATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG   78 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            6789999999999999999999999999999644   444444444444466899999999999999998877     78


Q ss_pred             CCEEEEccccCCcCCCccChHHHH----HHhHHH----HHHHHHHHHHcC-CCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          146 FDAVMHFAAVAYVGESTLDPLKYY----HNITSN----TLVVLESMARHG-VDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~~~----~~~~~~----~~~~l~~~~~~~-~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      +|+||||||+....+..+.+++.|    +.|+.+    ++.++|.|.+++ .++||++||.+.+.           +.+.
T Consensus        79 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~-----------~~~~  147 (255)
T d1gega_          79 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV-----------GNPE  147 (255)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------CCTT
T ss_pred             ccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc-----------cCcc
Confidence            999999999876666555554444    455554    455778777665 57899999987752           5566


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...|++||++++.|++.++.|   +|+++++|.||+|.|..
T Consensus       148 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~  188 (255)
T d1gega_         148 LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM  188 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH
T ss_pred             cccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChH
Confidence            889999999999999999988   68999999999888743

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.6e-29  Score=210.08  Aligned_cols=170  Identities=18%  Similarity=0.166  Sum_probs=136.4

Q ss_pred             CCCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-C
Q 024488           66 HEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-N  144 (267)
Q Consensus        66 ~~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~  144 (267)
                      .+.+ |++|||||++|||+++|++|+++|++|++++|+   .+++.+..++.    ..+..+.+|++|++++++++++ +
T Consensus         4 ~L~G-K~~lITGas~GIG~aia~~la~~G~~V~~~~r~---~~~l~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~g   75 (244)
T d1pr9a_           4 FLAG-RRVLVTGAGKGIGRGTVQALHATGARVVAVSRT---QADLDSLVREC----PGIEPVCVDLGDWEATERALGSVG   75 (244)
T ss_dssp             CCTT-CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHTTCC
T ss_pred             CCCC-CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC---HHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHHHHhC
Confidence            3455 999999999999999999999999999999964   34444444443    3578899999999999999988 7


Q ss_pred             CCCEEEEccccCCcCCCccChHHHHH----HhHHH----HHHHHHHHHH-cCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMAR-HGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~~l~~~~~-~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||.....+..+.+++.|+    .|+.+    ++.++|.|.+ .+.++||++||.+...           +.+
T Consensus        76 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~-----------~~~  144 (244)
T d1pr9a_          76 PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR-----------AVT  144 (244)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-----------CCT
T ss_pred             CceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccc-----------ccc
Confidence            89999999999776665554445444    44444    5567886554 4578999999987763           455


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ....|+.||++++.|++.++.|   +|++++.|.||+|.|..
T Consensus       145 ~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~  186 (244)
T d1pr9a_         145 NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSM  186 (244)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHH
T ss_pred             chhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChH
Confidence            6789999999999999999998   68999999999888754

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.97  E-value=1.4e-29  Score=220.15  Aligned_cols=187  Identities=26%  Similarity=0.352  Sum_probs=159.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCC--CCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP--EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      +|+||||||||+||++++++|.++|++|++++|..+......+.+.....  ....+.++.+|+.|.........  ..+
T Consensus        16 ~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~~   93 (341)
T d1sb8a_          16 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GVD   93 (341)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TCS
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc--ccc
Confidence            48999999999999999999999999999999755443332222222211  12468999999999998887776  789


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (267)
                      .++|.++.........++...++.|+.++.++++++.+.+.+++|++||.++||.....+++|+.+..|.+.|+.+|.++
T Consensus        94 ~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~  173 (341)
T d1sb8a_          94 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVN  173 (341)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred             ccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHH
Confidence            99999987655556678888999999999999999999999999999999999988888999999999999999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEeccccccccceeecCCCCCC
Q 024488          228 EDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTDR  265 (267)
Q Consensus       228 e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~~  265 (267)
                      |.+++.++++++++++++||+       ++|||+..+.
T Consensus       174 E~~~~~~~~~~~i~~~ilR~~-------~v~G~~~~~~  204 (341)
T d1sb8a_         174 ELYADVFSRCYGFSTIGLRYF-------NVFGRRQDPN  204 (341)
T ss_dssp             HHHHHHHHHHHCCCCEEEEEC-------CEECTTCCCC
T ss_pred             HHHHHHHHHHhCCCeEEEEec-------eeeccCcCCC
Confidence            999999999999999999999       9999976543

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=1.5e-29  Score=220.52  Aligned_cols=183  Identities=41%  Similarity=0.669  Sum_probs=153.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+|||||||||||++++++|+++|++|+++++..++............  ..+++++.+|++|.++++.+++..++|+||
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi   79 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT--KHHIPFYEVDLCDRKGLEKVFKEYKIDSVI   79 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH--TSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhc--ccCCeEEEeecCCHHHHHHHHhccCCCEEE
Confidence            789999999999999999999999999999875554433322222221  347889999999999999999877899999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCC----CCCCCCCCCCCCCChHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPE----KMPITEETPQAPINPYGKAKKM  226 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~----~~~~~e~~~~~~~~~Y~~sK~a  226 (267)
                      |+|+........+.+...+..|+.++.+++.++++.+.+++|++||..+||...    ..+++|+.+..|.+.|+.||.+
T Consensus        80 hlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~  159 (347)
T d1z45a2          80 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYA  159 (347)
T ss_dssp             ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHH
T ss_pred             EccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHH
Confidence            999987555556677888999999999999999999999999999999998543    3567888888899999999999


Q ss_pred             HHHHHHHhhhc--CCCcEEEEeccccccccceeecCCC
Q 024488          227 AEDIILDFSKN--SDMAVMILRLVVFFTLVAFVIKINP  262 (267)
Q Consensus       227 ~e~l~~~~a~e--~g~~~~~vrp~~v~~~~~~~~Gp~~  262 (267)
                      +|.+++.+.+.  .+++++++||+       ++|||.+
T Consensus       160 ~E~~~~~~~~~~~~~~~~~~lR~~-------~v~g~~~  190 (347)
T d1z45a2         160 IENILNDLYNSDKKSWKFAILRYF-------NPIGAHP  190 (347)
T ss_dssp             HHHHHHHHHHHSTTSCEEEEEEEC-------EEECCCT
T ss_pred             HHHHHHHHHHhhccCCcEEEEeec-------ceEeecC
Confidence            99999998764  68999999999       7776644

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.97  E-value=8.1e-30  Score=215.32  Aligned_cols=176  Identities=15%  Similarity=0.090  Sum_probs=134.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      .+ |++|||||++|||+++|++|+++|++|++++|+..+.+++.+.+++....+.++.++.+|++|+++++++++.    
T Consensus         4 ~g-K~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           4 SN-KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TT-CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CC-CEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            44 9999999999999999999999999999999754443444444443322335789999999999999998876    


Q ss_pred             -CCCCEEEEccccCCcCCC----ccChHH----HHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYVGES----TLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~~~----~~~~~~----~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                       +++|+||||||...+...    .+.+.+    .++.|+.+    ++.++|.|++++.+.|+++||.+..          
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~----------  152 (272)
T d1xkqa_          83 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGP----------  152 (272)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSS----------
T ss_pred             hCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccc----------
Confidence             799999999998755432    222222    33455554    5668888887765555555555544          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                       .+.+....|++||++++.|++.++.|   +|+++++|.||+|.|.+.
T Consensus       153 -~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~  199 (272)
T d1xkqa_         153 -QAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFT  199 (272)
T ss_dssp             -SCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHH
T ss_pred             -cCCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhh
Confidence             24556789999999999999999988   789999999999988553

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=2.9e-29  Score=208.31  Aligned_cols=167  Identities=17%  Similarity=0.154  Sum_probs=134.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (267)
                      +|++|||||++|||+++|++|+++|++|++++|+   .+++.+..++.    ..+..+.+|++|++++++++++ +++|+
T Consensus         5 GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~---~~~l~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~g~iDi   77 (242)
T d1cyda_           5 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT---NSDLVSLAKEC----PGIEPVCVDLGDWDATEKALGGIGPVDL   77 (242)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHTTCCCCSE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHHHHcCCCeE
Confidence            4999999999999999999999999999999964   34444444443    3578899999999999999988 78999


Q ss_pred             EEEccccCCcCCCccChHHHHH----HhHHH----HHHHHHHHHHc-CCCEEEEEeccccccCCCCCCCCCCCCCCCCCh
Q 024488          149 VMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARH-GVDTLIYSSTCATYGEPEKMPITEETPQAPINP  219 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~~l~~~~~~-~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~  219 (267)
                      ||||||+....+..+..++.|+    .|+.+    ++.++|.|.++ ..++||++||.+.+.           +.+....
T Consensus        78 lVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~-----------~~~~~~~  146 (242)
T d1cyda_          78 LVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV-----------TFPNLIT  146 (242)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-----------CCTTBHH
T ss_pred             EEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccc-----------cCCcccc
Confidence            9999998776665555555544    44444    45577776554 568999999987763           4556789


Q ss_pred             HHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          220 YGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       220 Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      |+++|++++.|++.++.|   +|+++++|.||+|.|..
T Consensus       147 Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~  184 (242)
T d1cyda_         147 YSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDM  184 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHH
T ss_pred             ccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHH
Confidence            999999999999999998   68999999999888754

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.96  E-value=1.1e-29  Score=213.71  Aligned_cols=178  Identities=13%  Similarity=0.081  Sum_probs=129.1

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +.+ |++|||||++|||+++|++|+++|++|++++|+....+++.+.+++......++.++.+|++|+++++++++.   
T Consensus         3 l~g-KvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           3 FAE-KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTT-CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            345 9999999999999999999999999999999754444444444443322234689999999999999998876   


Q ss_pred             --CCCCEEEEccccCCcCC----CccCh----HHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYVGE----STLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPIT  209 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~~~----~~~~~----~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~  209 (267)
                        +++|+||||||...+..    ..+.+    +..++.|+.+    ++.++|.|++++.+.|+++||.+.+         
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~---------  152 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGL---------  152 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSS---------
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccc---------
Confidence              79999999999854322    12222    3344455555    5668888887764444444444443         


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccce
Q 024488          210 EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVAF  256 (267)
Q Consensus       210 e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~~  256 (267)
                        .+.+....|++||++++.|++.++.|   +|++++.|.||+|.|....
T Consensus       153 --~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~  200 (264)
T d1spxa_         153 --HATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGS  200 (264)
T ss_dssp             --SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--
T ss_pred             --ccCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchh
Confidence              24555778999999999999999998   6899999999999886543

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.9e-29  Score=209.17  Aligned_cols=166  Identities=21%  Similarity=0.181  Sum_probs=132.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++|||||++|||+++|+.|+++|++|++++|+   .+.+.+..++.    .++.++.+|++|++++++++++     +
T Consensus         6 GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~---~~~~~~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (250)
T d1ydea1           6 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD---ESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRFG   78 (250)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHhc----CCCeEEEccCCCHHHHHHHHHHHHHhcC
Confidence            3999999999999999999999999999999964   33333333332    4678999999999999999876     7


Q ss_pred             CCCEEEEccccCCc-CCCccChHHH----HHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYV-GESTLDPLKY----YHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       145 ~~D~li~~Ag~~~~-~~~~~~~~~~----~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                      ++|+||||||.... ...++.+.+.    ++.|+.+    ++.++|.|++.+ ++||++||.+..-           +.+
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~-----------~~~  146 (250)
T d1ydea1          79 RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAI-----------GQA  146 (250)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHH-----------CCT
T ss_pred             CCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccc-----------ccc
Confidence            89999999997543 3333433443    4455554    566888898765 7999999987763           455


Q ss_pred             CCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...+|+++|++++.|++.++.|   +|++++.|.||+|.|.+
T Consensus       147 ~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~  188 (250)
T d1ydea1         147 QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPL  188 (250)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred             CcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChh
Confidence            6789999999999999999998   68999999999998754

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.6e-29  Score=213.47  Aligned_cols=174  Identities=19%  Similarity=0.149  Sum_probs=140.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC---CCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---C
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR---GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---N  144 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~  144 (267)
                      |+|||||||+|||+++|++|+++|++|+.+++..+   ..+++.+..+++...+.++.++.+|++|.+++++++++   +
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g   82 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence            78899999999999999999999998766654333   33344455556655677899999999999999998876   7


Q ss_pred             CCCEEEEccccCCcCCCccChHHHH----HHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLKYY----HNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~~~----~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      .+|+||||||.......++.+++.|    +.|+.+    ++.++|.|++++.++||++||.+..           .+.+.
T Consensus        83 ~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~-----------~~~~~  151 (285)
T d1jtva_          83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGL-----------MGLPF  151 (285)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGT-----------SCCTT
T ss_pred             chhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhc-----------CCCCC
Confidence            8999999999877666555554444    445554    6679999999998999999998776           25666


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ...|++||++++.|+++++.|   +|+++++|.||+|.|.+.
T Consensus       152 ~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~  193 (285)
T d1jtva_         152 NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFM  193 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHH
Confidence            889999999999999999998   689999999999998554

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.96  E-value=1.5e-29  Score=213.91  Aligned_cols=175  Identities=17%  Similarity=0.134  Sum_probs=136.4

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      .+ |+++||||++|||+++|++|+++|++|++++|+....+++.+.+++......++.++.+|++|+++++++++.    
T Consensus         3 ~g-K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           3 SG-KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             TT-CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CC-CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            44 9999999999999999999999999999999754333334444443322234789999999999999998876    


Q ss_pred             -CCCCEEEEccccCCcCC--CccChHH----HHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYVGE--STLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~~--~~~~~~~----~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                       +++|+||||||......  ..+.+.+    .++.|+.+    ++.++|.|++++.++|+++||.+...           
T Consensus        82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~-----------  150 (274)
T d1xhla_          82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ-----------  150 (274)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS-----------
T ss_pred             cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccc-----------
Confidence             79999999999754332  2222233    34455554    66788999888888999998876652           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +.+....|++||++++.|++.++.|   +|++++.|.||+|.|.+
T Consensus       151 ~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~  195 (274)
T d1xhla_         151 AHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGF  195 (274)
T ss_dssp             CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSH
T ss_pred             cCCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCch
Confidence            4555789999999999999999998   68999999999998754

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.96  E-value=5.8e-29  Score=209.61  Aligned_cols=173  Identities=13%  Similarity=0.177  Sum_probs=136.5

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +.+ |++|||||++|||+++|++|+++|++|++++|+   .+++.+..+++.. ...+.++.+|++|+++++++++.   
T Consensus         4 L~g-KvalITGas~GIG~aia~~la~~Ga~V~i~~r~---~~~~~~~~~~l~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (268)
T d2bgka1           4 LQD-KVAIITGGAGGIGETTAKLFVRYGAKVVIADIA---DDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIA   78 (268)
T ss_dssp             TTT-CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHhcC-CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            445 999999999999999999999999999999964   4455555555533 45688899999999999999876   


Q ss_pred             --CCCCEEEEccccCCcCC--CccChHH----HHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYVGE--STLDPLK----YYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~~~--~~~~~~~----~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~  211 (267)
                        +++|+||||||+....+  ..+...+    .++.|+.+    ++.++|.|.+++.++||++||.+.+-          
T Consensus        79 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~----------  148 (268)
T d2bgka1          79 KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFT----------  148 (268)
T ss_dssp             HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTC----------
T ss_pred             HcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccc----------
Confidence              79999999999864332  3333333    34455554    66788999988889999999977652          


Q ss_pred             CCCCCC-ChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          212 TPQAPI-NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       212 ~~~~~~-~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                       +..+. ..|++||++++.|++.++.|   +|+++++|.||+|.|.+.
T Consensus       149 -~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~  195 (268)
T d2bgka1         149 -AGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLL  195 (268)
T ss_dssp             -CCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCC
T ss_pred             -cccccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHH
Confidence             22333 47999999999999999998   689999999998888543

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.96  E-value=2.6e-29  Score=209.86  Aligned_cols=169  Identities=17%  Similarity=0.238  Sum_probs=135.7

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +.+ |++|||||++|||+++|++|+++|++|++++|+   .+.+.+..+++   +.+..++++|++|+++++++++.   
T Consensus         4 L~g-K~alITGas~GIG~aia~~la~~Ga~V~~~~~~---~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~   76 (253)
T d1hxha_           4 LQG-KVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN---EAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQR   76 (253)
T ss_dssp             TTT-CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSC---HHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHH
Confidence            345 999999999999999999999999999999963   34444444554   45788899999999999998877   


Q ss_pred             --CCCCEEEEccccCCcCCCccChHHHH----HHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYVGESTLDPLKYY----HNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~~~~~~~~~~~~----~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                        +++|+||||||+....+..+.+.+.|    +.|+.+    ++.++|.|++++ ++||++||.+.+           .+
T Consensus        77 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~-----------~~  144 (253)
T d1hxha_          77 RLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSW-----------LP  144 (253)
T ss_dssp             HHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGT-----------SC
T ss_pred             HhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-Cceecccchhhh-----------cC
Confidence              79999999999876665555444444    444444    566888887654 899999998775           25


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecccccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKN-----SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e-----~g~~~~~vrp~~v~~~~  254 (267)
                      .+...+|+.||++++.|++.++.|     ++++++.|.||+|.|..
T Consensus       145 ~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~  190 (253)
T d1hxha_         145 IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM  190 (253)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH
T ss_pred             ccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHh
Confidence            566789999999999999999987     35999999999888754

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.2e-29  Score=212.19  Aligned_cols=167  Identities=23%  Similarity=0.212  Sum_probs=134.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCC--CCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFP--EPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +|++|||||++|||+++|++|+++|++|++++|+..   ++.+..+++..  .+.++.++.+|++|+++++++++.    
T Consensus         3 GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (254)
T d2gdza1           3 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLE---AGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   79 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            499999999999999999999999999999996443   33333333322  245789999999999999998876    


Q ss_pred             -CCCCEEEEccccCCcCCCccChHHHHHHhHHH----HHHHHHHHHHcC---CCEEEEEeccccccCCCCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYVGESTLDPLKYYHNITSN----TLVVLESMARHG---VDTLIYSSTCATYGEPEKMPITEETPQA  215 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~---~~~iV~vSS~~~~g~~~~~~~~e~~~~~  215 (267)
                       +++|+||||||+...    .+.++.++.|+.+    ++.++|.|.+++   .++||++||.+.+           .+.+
T Consensus        80 ~G~iDilVnnAg~~~~----~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~-----------~~~~  144 (254)
T d2gdza1          80 FGRLDILVNNAGVNNE----KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL-----------MPVA  144 (254)
T ss_dssp             HSCCCEEEECCCCCCS----SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT-----------SCCT
T ss_pred             cCCcCeeccccccccc----ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhc-----------cCCC
Confidence             799999999998643    3456667777665    666888887764   4789999998876           2566


Q ss_pred             CCChHHHHHHHHHHHHHH--hhhc---CCCcEEEEecccccccc
Q 024488          216 PINPYGKAKKMAEDIILD--FSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       216 ~~~~Y~~sK~a~e~l~~~--~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ...+|++||++++.|+++  ++.|   +|+++++|.||+|.|.+
T Consensus       145 ~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~  188 (254)
T d2gdza1         145 QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAI  188 (254)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHH
T ss_pred             CccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChh
Confidence            678999999999999996  5655   78999999999988743

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.96  E-value=6.9e-29  Score=207.89  Aligned_cols=172  Identities=17%  Similarity=0.140  Sum_probs=138.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      .+ |+||||||++|||+++|++|+++|++|++++|+.   +++.+..+++...+..+.++.+|+++.+++++++++    
T Consensus         5 ~g-K~alITGas~GIG~aia~~la~~G~~V~i~~r~~---~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           5 KG-TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNE---KELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             TT-CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            45 9999999999999999999999999999999654   344444444444467888999999999999888765    


Q ss_pred             --CCCCEEEEccccCCcCCCccChHHHHHH----hHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYVGESTLDPLKYYHN----ITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~~~~~~~~~~~~~~----~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                        +.+|+||||||.....+.++..++.|+.    |..+    ++.++|.|.+.+.++||++||.+...           +
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~-----------~  149 (258)
T d1ae1a_          81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS-----------A  149 (258)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS-----------C
T ss_pred             hCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccc-----------c
Confidence              4699999999987766655555555543    4333    55678889898999999999988762           5


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .+....|+.+|++++.|++.++.|   +|+++++|.||+|.|..
T Consensus       150 ~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~  193 (258)
T d1ae1a_         150 LPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPL  193 (258)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred             cccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcc
Confidence            566889999999999999999998   68999999999888754

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.96  E-value=3e-29  Score=219.95  Aligned_cols=185  Identities=25%  Similarity=0.387  Sum_probs=148.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEE-EecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTI-VDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      |+||||||||+||++|+++|+++|++|++ +++....  ...+.+..+ ....+++++++|++|.+++..+++..++|+|
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~--~~~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~V   77 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYA--GNLESLSDI-SESNRYNFEHADICDSAEITRIFEQYQPDAV   77 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTT--CCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcc--ccHHHHHhh-hhcCCcEEEEccCCCHHHHHHHHHhCCCCEE
Confidence            46999999999999999999999997554 4432211  112223333 2245899999999999999999987789999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC---------CCEEEEEeccccccCCCCCC----------CCC
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG---------VDTLIYSSTCATYGEPEKMP----------ITE  210 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~iV~vSS~~~~g~~~~~~----------~~e  210 (267)
                      ||+|+.........++...++.|+.++.+++..+.+.+         .++||++||.++||.....+          ..|
T Consensus        78 ihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e  157 (361)
T d1kewa_          78 MHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTE  157 (361)
T ss_dssp             EECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCT
T ss_pred             EECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCccc
Confidence            99999766555566788899999999999999997753         45999999999998654322          235


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCCC
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTDR  265 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~~  265 (267)
                      ..+..|.+.|+.||.++|.+++.++++++++++++||+       ++|||+....
T Consensus       158 ~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~-------~vyGp~~~~~  205 (361)
T d1kewa_         158 TTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCS-------NNYGPYHFPE  205 (361)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC-------EEESTTCCTT
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecC-------ceECcCCCcC
Confidence            56677889999999999999999999999999999999       9999986543

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4e-29  Score=213.34  Aligned_cols=175  Identities=15%  Similarity=0.145  Sum_probs=138.6

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcC--CCCCceEEEEccCCCHHHHHHHhhc-
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF--PEPGRLQFIYADLGDAKAVNKFFSE-  143 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~v~~~~~~-  143 (267)
                      +.+ |++|||||++|||+++|++|+++|++|++++|+....++..+.+++..  ..+.++.++.+|++|++++++++++ 
T Consensus        10 L~g-KvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1          10 LQG-QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            455 999999999999999999999999999999975544444444443321  2256889999999999999998876 


Q ss_pred             ----CCCCEEEEccccCCcCCCccChHHHHH----HhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCC
Q 024488          144 ----NAFDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE  211 (267)
Q Consensus       144 ----~~~D~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~  211 (267)
                          +++|+||||||.....+..+.+++.|+    .|+.+    ++.++|.|.+++.++||++||....           
T Consensus        89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~-----------  157 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA-----------  157 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTT-----------
T ss_pred             HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccc-----------
Confidence                799999999998766665555555444    44444    5668888888888899998775443           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                       ..+....|+++|+++++|++.++.|   +|+++++|.||+|.|..
T Consensus       158 -~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~  202 (297)
T d1yxma1         158 -GFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT  202 (297)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred             -cccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcc
Confidence             3445789999999999999999998   58999999999988754

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=8.5e-30  Score=219.20  Aligned_cols=175  Identities=28%  Similarity=0.458  Sum_probs=140.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||+|+||++++++|+++|++|+++++......+.   +... .....+.....|+.+     .++.  ++|+||
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~---~~~~-~~~~~~d~~~~~~~~-----~~~~--~~d~Vi   70 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRN---VEHW-IGHENFELINHDVVE-----PLYI--EVDQIY   70 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---TGGG-TTCTTEEEEECCTTS-----CCCC--CCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHH---HHHh-cCCCceEEEehHHHH-----HHHc--CCCEEE
Confidence            8999999999999999999999999999998744332221   1111 112345556666543     3343  799999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCC-----CCCCCCChHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE-----TPQAPINPYGKAKK  225 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~-----~~~~~~~~Y~~sK~  225 (267)
                      |+|+.........++.+.++.|+.++.++++++++.+. ++|++||.++||.....+++|+     .|..|.+.|+.||.
T Consensus        71 hlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~  149 (312)
T d2b69a1          71 HLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKR  149 (312)
T ss_dssp             ECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHH
T ss_pred             ECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHH
Confidence            99997665555678888999999999999999998875 8999999999997766666554     46678889999999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          226 MAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       226 a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      ++|.+++.++++++++++++||+       ++|||++..
T Consensus       150 ~~E~~~~~~~~~~~~~~~~lR~~-------~vyGp~~~~  181 (312)
T d2b69a1         150 VAETMCYAYMKQEGVEVRVARIF-------NTFGPRMHM  181 (312)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEEC-------CEECTTCCT
T ss_pred             HHHHHHHHHHHHhCCcEEEEEee-------eEECCCCCC
Confidence            99999999999999999999999       999998654

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.96  E-value=1.8e-28  Score=211.44  Aligned_cols=183  Identities=27%  Similarity=0.383  Sum_probs=153.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeE------EEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRV------TIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSEN  144 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V------~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~  144 (267)
                      |+||||||+|+||++++++|+++|++|      +.+++......  ...+... .....+.++.+|+.+.........  
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~--~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~--   75 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN--RANLAPV-DADPRLRFVHGDIRDAGLLARELR--   75 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC--GGGGGGG-TTCTTEEEEECCTTCHHHHHHHTT--
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCcccc--HhHhhhh-hcCCCeEEEEeccccchhhhcccc--
Confidence            469999999999999999999999854      44443221111  1112222 224579999999999998888776  


Q ss_pred             CCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHH
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAK  224 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK  224 (267)
                      .+|.|+|+|+..........+++.++.|+.++.++++++.+.+.+++|++||.++||.....+++|+.+..|.+.|+.||
T Consensus        76 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK  155 (322)
T d1r6da_          76 GVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASK  155 (322)
T ss_dssp             TCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHH
T ss_pred             ccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHH
Confidence            88999999988665555667788899999999999999999999999999999999998888999999999999999999


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCCC
Q 024488          225 KMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTDR  265 (267)
Q Consensus       225 ~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~~  265 (267)
                      .++|.+++.++++++++++++||+       ++|||++...
T Consensus       156 ~~~E~~~~~~~~~~~~~~~~lR~~-------~vyGp~~~~~  189 (322)
T d1r6da_         156 AGSDLVARAYHRTYGLDVRITRCC-------NNYGPYQHPE  189 (322)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEEC-------EEECTTCCTT
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEee-------eEECcCCCcC
Confidence            999999999999999999999999       9999987654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.96  E-value=1.6e-28  Score=211.26  Aligned_cols=184  Identities=24%  Similarity=0.211  Sum_probs=156.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||||+||++++++|+++||+|++++|.....  ..+.++++. ...+++++.+|++|.+++.+.+.....++++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~--~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   77 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSD--TRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKAQPQEVY   77 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSC--CCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcc--cHHHHHHhc-ccCCcEEEEccccChHHhhhhhccccccccc
Confidence            6899999999999999999999999999999754322  122233332 2347899999999999999988877789999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-DTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (267)
                      |+|+..........+.+.++.|+.++.++++++.+.+. .+|++.||.++|+.....+.+|+.+..+.+.|+.+|.++|.
T Consensus        78 ~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  157 (321)
T d1rpna_          78 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHW  157 (321)
T ss_dssp             ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             cccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHH
Confidence            99987655555667888899999999999999998875 47888889999988888888999999999999999999999


Q ss_pred             HHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          230 IILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       230 l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      +++.++++++++++++||+       ++|||....
T Consensus       158 ~~~~~~~~~~~~~~~lr~~-------~vyGp~~~~  185 (321)
T d1rpna_         158 ITVNYRESFGLHASSGILF-------NHESPLRGI  185 (321)
T ss_dssp             HHHHHHHHHCCCEEEEEEC-------CEECTTSCT
T ss_pred             HHHHHHhhcCCcEEEEEEe-------cccCCCccc
Confidence            9999999999999999999       999997543

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.8e-28  Score=204.08  Aligned_cols=175  Identities=17%  Similarity=0.130  Sum_probs=135.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|+||||||++|||+++|+.|+++|++|++++|+..+.+++.+.+++.. .+.++.++.||++|+++++++++.     +
T Consensus        10 ~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~-~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g   88 (257)
T d1xg5a_          10 DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG-YPGTLIPYRCDLSNEEDILSMFSAIRSQHS   88 (257)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            3999999999999999999999999999999975433333333333321 134788999999999999998877     7


Q ss_pred             CCCEEEEccccCCcCCCccChHHHHHH----hHHH----HHHHHHHHHHcC--CCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLKYYHN----ITSN----TLVVLESMARHG--VDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~~~~~----~~~~----~~~~l~~~~~~~--~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      ++|+||||||.....+..+.+++.|+.    |+.+    ++.+++.|++++  .++||++||.+.+..         .|.
T Consensus        89 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~---------~p~  159 (257)
T d1xg5a_          89 GVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV---------LPL  159 (257)
T ss_dssp             CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC---------CSC
T ss_pred             CCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC---------CCC
Confidence            899999999987766665555555544    4333    455788887765  589999999876521         133


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN-----SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e-----~g~~~~~vrp~~v~~~~  254 (267)
                      .....|+.+|++++.|++.++.|     +++++++|.||.+-+..
T Consensus       160 ~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~  204 (257)
T d1xg5a_         160 SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQF  204 (257)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSH
T ss_pred             cccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChh
Confidence            34567999999999999999865     68999999999877643

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.96  E-value=2.4e-28  Score=203.58  Aligned_cols=175  Identities=14%  Similarity=0.107  Sum_probs=133.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHH---hCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           70 VTHVLVTGGAGYIGSHAALRLL---KDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~---~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      ||+|||||||+|||+++|++|+   ++|++|++++|+....+++.+..    ..+.++.++++|++|+++++++++.   
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~Dvs~~~~v~~~~~~i~~   77 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLA----KNHSNIHILEIDLRNFDAYDKLVADIEG   77 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHH----HHCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH----hcCCcEEEEEEEeccHHHHHHHHhhhHH
Confidence            7999999999999999999996   57999999998765544433322    2246899999999999999887763   


Q ss_pred             ----CCCCEEEEccccCCcCC-CccCh----HHHHHHhHHH----HHHHHHHHHHc-----------CCCEEEEEecccc
Q 024488          144 ----NAFDAVMHFAAVAYVGE-STLDP----LKYYHNITSN----TLVVLESMARH-----------GVDTLIYSSTCAT  199 (267)
Q Consensus       144 ----~~~D~li~~Ag~~~~~~-~~~~~----~~~~~~~~~~----~~~~l~~~~~~-----------~~~~iV~vSS~~~  199 (267)
                          +++|+||||||+..... ..+..    ++.++.|+.+    ++.++|.|++.           +.+++|++||...
T Consensus        78 ~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g  157 (248)
T d1snya_          78 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG  157 (248)
T ss_dssp             HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred             HhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccc
Confidence                67999999999865432 22222    3345566666    55678888764           3579999999765


Q ss_pred             ccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccce
Q 024488          200 YGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVAF  256 (267)
Q Consensus       200 ~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~~  256 (267)
                      .-.        ..+.+....|++||+++..|++.++.|   .|++++.|.||+|.|.+..
T Consensus       158 ~~~--------~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~  209 (248)
T d1snya_         158 SIQ--------GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGG  209 (248)
T ss_dssp             CST--------TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTC
T ss_pred             ccC--------CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCccc
Confidence            411        013445679999999999999999987   6899999999999997654

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.96  E-value=7e-28  Score=203.70  Aligned_cols=169  Identities=15%  Similarity=0.153  Sum_probs=132.9

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +.+ |+||||||++|||+++|++|+++|++|++++|+   .+++.+..++.   +.++..+.+|+++.++++++++.   
T Consensus         3 L~g-K~alITGas~GIG~aia~~la~~Ga~V~i~~r~---~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~   75 (276)
T d1bdba_           3 LKG-EAVLITGGASGLGRALVDRFVAEGAKVAVLDKS---AERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVA   75 (276)
T ss_dssp             TTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHH
Confidence            345 999999999999999999999999999999964   34444444443   45789999999999999998876   


Q ss_pred             --CCCCEEEEccccCCcCC-----CccCh----HHHHHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYVGE-----STLDP----LKYYHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPI  208 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~~~-----~~~~~----~~~~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~  208 (267)
                        +++|++|||||+.....     ..+..    ++.++.|+.+    ++.++|.|++++ ++||+++|.+.+        
T Consensus        76 ~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~--------  146 (276)
T d1bdba_          76 RFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGF--------  146 (276)
T ss_dssp             HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGT--------
T ss_pred             HhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhc--------
Confidence              79999999999754332     22332    2334555555    566889998776 688888886654        


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHhhhc--CCCcEEEEecccccccc
Q 024488          209 TEETPQAPINPYGKAKKMAEDIILDFSKN--SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e--~g~~~~~vrp~~v~~~~  254 (267)
                         .+.+....|++||++++.|+++++.|  .++++++|.||+|.|.+
T Consensus       147 ---~~~~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~  191 (276)
T d1bdba_         147 ---YPNGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDL  191 (276)
T ss_dssp             ---STTSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCC
T ss_pred             ---cCCCCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCc
Confidence               24556789999999999999999998  45999999999998855

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.96  E-value=2.7e-28  Score=203.83  Aligned_cols=169  Identities=11%  Similarity=0.117  Sum_probs=136.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCC-CHHHHHHHhhc-----
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG-DAKAVNKFFSE-----  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~v~~~~~~-----  143 (267)
                      +|+||||||++|||+++|++|+++|++|++++|+..+.+.+.+ +.+. ....++.++.+|++ +.++++++++.     
T Consensus         5 gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~-~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           5 NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAE-LKAI-NPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHH-HHHH-CTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHH-HHhh-CCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            3999999999999999999999999999999876554333322 2222 22457899999998 67778877765     


Q ss_pred             CCCCEEEEccccCCcCCCccChHHHHHHhHHH----HHHHHHHHHHc---CCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYVGESTLDPLKYYHNITSN----TLVVLESMARH---GVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~---~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      +++|+||||||...    .+..++.++.|+.+    ++.++|.|.++   ..++||++||.+.+.           +.+.
T Consensus        83 g~iDilvnnAG~~~----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~-----------~~~~  147 (254)
T d1sbya1          83 KTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN-----------AIHQ  147 (254)
T ss_dssp             SCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-----------CCTT
T ss_pred             CCCCEEEeCCCCCC----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhcc-----------CCCC
Confidence            78999999999753    45667788888887    55677888665   257899999988763           5666


Q ss_pred             CChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ...|++||++...|+++++.|   +|++++.|.||+|.|.+.
T Consensus       148 ~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~  189 (254)
T d1sbya1         148 VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLV  189 (254)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccc
Confidence            889999999999999999998   689999999999988653

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=9.3e-29  Score=211.45  Aligned_cols=173  Identities=17%  Similarity=0.121  Sum_probs=134.2

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC------CCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHH
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR------GNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF  140 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~  140 (267)
                      +.+ |++|||||++|||+++|++|+++|++|++.++...      ..+.+.+..+++..   ......+|++|.++++++
T Consensus         5 l~g-KvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~   80 (302)
T d1gz6a_           5 FDG-RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR---RGGKAVANYDSVEAGEKL   80 (302)
T ss_dssp             CTT-CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH---TTCEEEEECCCGGGHHHH
T ss_pred             cCC-CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh---cccccccccchHHHHHHH
Confidence            345 99999999999999999999999999999987542      22223333344322   334567888888877777


Q ss_pred             hhc-----CCCCEEEEccccCCcCCCccChHHHHH----HhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCC
Q 024488          141 FSE-----NAFDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMP  207 (267)
Q Consensus       141 ~~~-----~~~D~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~  207 (267)
                      ++.     +++|+||||||+....+..+.+.+.|+    .|+.+    ++.++|.|++++.++||++||.+.+-      
T Consensus        81 v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~------  154 (302)
T d1gz6a_          81 VKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY------  154 (302)
T ss_dssp             HHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH------
T ss_pred             HHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcC------
Confidence            665     789999999999877665555554444    45544    56689999999889999999977652      


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          208 ITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       208 ~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                           +.+....|++||++++.|+++++.|   +|+++++|.||++.+..
T Consensus       155 -----~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~  199 (302)
T d1gz6a_         155 -----GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMT  199 (302)
T ss_dssp             -----CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTT
T ss_pred             -----CCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcch
Confidence                 4556789999999999999999998   68999999999776543

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.96  E-value=4.7e-28  Score=210.87  Aligned_cols=183  Identities=23%  Similarity=0.291  Sum_probs=147.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      ||+||||||||+||++++++|+++|++|.++.+...+.......+...  ...+++++.+|++|.+.+..++.  ..|.+
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~--~~~~i~~~~~Di~d~~~~~~~~~--~~~~v   77 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAA--KADAI   77 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHT--TCSEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHh--hcCCeEEEEccCCCHHHHHHHHh--hhhhh
Confidence            699999999999999999999999987555543211111111112222  13589999999999999999998  78999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCC------------CCCCCCCCCCCCCC
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEP------------EKMPITEETPQAPI  217 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~------------~~~~~~e~~~~~~~  217 (267)
                      +|+|+.........++.+.++.|+.++.+++..+.+.+ .++|++||..+||..            ....++|+.+..|.
T Consensus        78 ~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~-~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~  156 (346)
T d1oc2a_          78 VHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPS  156 (346)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCC
T ss_pred             hhhhhcccccchhhCcccceeeehHhHHhhhhhhcccc-ccccccccceEecccCccccccccccCcccccccCCCCCCC
Confidence            99998876555556778899999999999999998887 589999999999742            12345667777889


Q ss_pred             ChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          218 NPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      +.|+.+|.++|.+++.++++++++++++||+       ++|||+...
T Consensus       157 s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~-------~vyGp~~~~  196 (346)
T d1oc2a_         157 SPYSSTKAASDLIVKAWVRSFGVKATISNCS-------NNYGPYQHI  196 (346)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC-------CEESTTCCT
T ss_pred             CHHHHHHHHHHHHHHHHHHHcCCCEEEEeec-------ceeCCCCCc
Confidence            9999999999999999999899999999999       999997654

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.95  E-value=2.2e-28  Score=205.03  Aligned_cols=172  Identities=19%  Similarity=0.144  Sum_probs=131.2

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +.+ |+||||||++|||+++|++|+++|++|+++++  ++.+.+.+..+++...+.++.++++|++|.++++++++.   
T Consensus         4 L~G-K~alITGas~GIG~aia~~la~~G~~Vvi~~~--~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   80 (259)
T d1ja9a_           4 LAG-KVALTTGAGRGIGRGIAIELGRRGASVVVNYG--SSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVS   80 (259)
T ss_dssp             TTT-CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES--SCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcC--CChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHH
Confidence            345 99999999999999999999999999999875  333334444444444567899999999999999998876   


Q ss_pred             --CCCCEEEEccccCCcCCCccChHHHHH----HhHHH----HHHHHHHHHHcCCCEEEEEecc-ccccCCCCCCCCCCC
Q 024488          144 --NAFDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTC-ATYGEPEKMPITEET  212 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~~l~~~~~~~~~~iV~vSS~-~~~g~~~~~~~~e~~  212 (267)
                        +++|+||||||.....+..+...+.|+    .|+.+    ++.++|.|++.  +++++++|. +...           
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~~-----------  147 (259)
T d1ja9a_          81 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMT-----------  147 (259)
T ss_dssp             HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCC-----------
T ss_pred             HcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC--Cccccccccccccc-----------
Confidence              789999999998766655544444444    44444    44566666443  466666554 3331           


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +.+....|+++|++++.+++.++.|   +|+++++|.||+|.|.+
T Consensus       148 ~~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~  192 (259)
T d1ja9a_         148 GIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDM  192 (259)
T ss_dssp             SCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChh
Confidence            3455789999999999999999998   68999999999988743

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.95  E-value=8.2e-28  Score=201.63  Aligned_cols=183  Identities=11%  Similarity=0.067  Sum_probs=136.2

Q ss_pred             CCCCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-
Q 024488           65 QHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-  143 (267)
Q Consensus        65 ~~~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-  143 (267)
                      +..++ |++|||||++|||+++|++|+++|++|++++|+....++..+.+.+.  .+.++.++.+|++|++++++++++ 
T Consensus         5 m~l~g-K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~--~g~~~~~~~~Dv~~~~~v~~~~~~~   81 (260)
T d1h5qa_           5 ISFVN-KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKE--FGVKTKAYQCDVSNTDIVTKTIQQI   81 (260)
T ss_dssp             ECCTT-EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHH--HTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH--hCCceEEEEccCCCHHHHHHHHHHH
Confidence            34556 99999999999999999999999999999997655444433333221  256789999999999999998876 


Q ss_pred             ----CCCCEEEEccccCCcCCCccChHHHH----HHhHHH----HHHHHHHHHHc-CCCEEEEEeccccccCCCCCCCCC
Q 024488          144 ----NAFDAVMHFAAVAYVGESTLDPLKYY----HNITSN----TLVVLESMARH-GVDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       144 ----~~~D~li~~Ag~~~~~~~~~~~~~~~----~~~~~~----~~~~l~~~~~~-~~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                          +++|+||||||+....+..+.+.+.|    +.|+.+    ++.+++.|.++ ..++|+++||.........    .
T Consensus        82 ~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~----~  157 (260)
T d1h5qa_          82 DADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS----S  157 (260)
T ss_dssp             HHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE----E
T ss_pred             HHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccc----c
Confidence                78999999999876666555444444    445444    45578887655 4567777777665421100    0


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      ..+.+....|++||++++.+++.++.|   +|+++++|.||+|.|..
T Consensus       158 ~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~  204 (260)
T d1h5qa_         158 LNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQ  204 (260)
T ss_dssp             TTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred             cccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcc
Confidence            012234678999999999999999988   68999999999888754

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.95  E-value=9.4e-28  Score=207.75  Aligned_cols=186  Identities=21%  Similarity=0.205  Sum_probs=148.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC--CcchhhhhhhcC-CCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG--NIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      |++|||||||+||++|+++|+++||+|++++|....  .+.......... .....++++.+|+++.+++.+.++..++|
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D   81 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD   81 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence            899999999999999999999999999999985431  111111111110 11346889999999999999998877899


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHc-----CCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-----GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGK  222 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~  222 (267)
                      +|||+|+........+++...+..|..++..++.++++.     ...++++.||..+++.. ..+++|+.+..|.+.|+.
T Consensus        82 ~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~-~~~~~E~~~~~p~~~Y~~  160 (339)
T d1n7ha_          82 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST-PPPQSETTPFHPRSPYAA  160 (339)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTS-CSSBCTTSCCCCCSHHHH
T ss_pred             hhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccC-CCCCCCCCCCCCcchhhH
Confidence            999999986554455688889999999999988887653     24567788887777543 456889999999999999


Q ss_pred             HHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          223 AKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       223 sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      +|.++|.++..++++++++++++||+       ++|||+...
T Consensus       161 sK~~~E~~~~~~~~~~~~~~~ilR~~-------~vyGp~~~~  195 (339)
T d1n7ha_         161 SKCAAHWYTVNYREAYGLFACNGILF-------NHESPRRGE  195 (339)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEEC-------CEECTTSCT
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEEEc-------cccCCCCCC
Confidence            99999999999999999999999999       999997543

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=4.3e-28  Score=208.09  Aligned_cols=164  Identities=16%  Similarity=0.194  Sum_probs=138.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||||+||++|+++|+++|+.|+++++..                       ++|+.|.+.+.++++...+|.++
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~d~v~   59 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------------ELNLLDSRAVHDFFASERIDQVY   59 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch-----------------------hccccCHHHHHHHHhhcCCCEEE
Confidence            7899999999999999999999999998765311                       25899999999998877899999


Q ss_pred             EccccCCcC-CCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC-----CCCChHHHHH
Q 024488          151 HFAAVAYVG-ESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ-----APINPYGKAK  224 (267)
Q Consensus       151 ~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~-----~~~~~Y~~sK  224 (267)
                      |+|+..... .....+.+.++.|+.+|.+++.++.+.+.+++|++||.++||.....+++|+.+.     ++.++|+.||
T Consensus        60 ~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK  139 (315)
T d1e6ua_          60 LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAK  139 (315)
T ss_dssp             ECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHH
T ss_pred             EcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHH
Confidence            999764321 2334566778899999999999999999999999999999997776677776433     3345799999


Q ss_pred             HHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          225 KMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       225 ~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      .++|.+++.+.+++|++++++||+       ++|||++..
T Consensus       140 ~~~E~~~~~~~~~~gl~~~ilR~~-------~vyGp~~~~  172 (315)
T d1e6ua_         140 IAGIKLCESYNRQYGRDYRSVMPT-------NLYGPHDNF  172 (315)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEEC-------EEESTTCCC
T ss_pred             HHHHHHHHHHHHHhCCCEEEEeec-------cEECCCCCC
Confidence            999999999999999999999999       999997653

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.95  E-value=7e-27  Score=204.47  Aligned_cols=179  Identities=21%  Similarity=0.226  Sum_probs=146.8

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (267)
                      .++ |+|||||||||||++|+++|+++|++|+++++.....  ...   .    .....+..+|+.+.+.+.++++  ++
T Consensus        13 ~~n-MKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~--~~~---~----~~~~~~~~~D~~~~~~~~~~~~--~~   80 (363)
T d2c5aa1          13 SEN-LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH--MTE---D----MFCDEFHLVDLRVMENCLKVTE--GV   80 (363)
T ss_dssp             TSC-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS--SCG---G----GTCSEEEECCTTSHHHHHHHHT--TC
T ss_pred             CCC-CEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccc--hhh---h----cccCcEEEeechhHHHHHHHhh--cC
Confidence            356 6699999999999999999999999999998643221  111   1    1245778899999999998887  89


Q ss_pred             CEEEEccccCCcCC-CccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCC-------CCCCCCCCC
Q 024488          147 DAVMHFAAVAYVGE-STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPIT-------EETPQAPIN  218 (267)
Q Consensus       147 D~li~~Ag~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~-------e~~~~~~~~  218 (267)
                      |.|||+|+...... ....+...+..|..++.+++.++.+.+.+++|++||..+|+.....+.+       |..+..|.+
T Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~  160 (363)
T d2c5aa1          81 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQD  160 (363)
T ss_dssp             SEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSS
T ss_pred             CeEeecccccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCC
Confidence            99999998754322 3456777888999999999999999999999999999999855443333       445677889


Q ss_pred             hHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          219 PYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       219 ~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      .|+.||.++|.+++.+.+++|++++++||+       ++|||++..
T Consensus       161 ~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~-------~vyG~~~~~  199 (363)
T d2c5aa1         161 AFGLEKLATEELCKHYNKDFGIECRIGRFH-------NIYGPFGTW  199 (363)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEEC-------CEECTTSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCEEEEEee-------eEeccCCcc
Confidence            999999999999999999999999999999       999997654

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.95  E-value=5.1e-28  Score=202.01  Aligned_cols=164  Identities=14%  Similarity=0.145  Sum_probs=127.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----CCC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----NAF  146 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~~  146 (267)
                      ++|||||++|||+++|++|+++|++|++++|+....+++.+..         ..+..+|++|.+++++++++     +++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~---------~~~~~~dv~~~~~~~~~~~~~~~~~G~i   72 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA---------ETYPQLKPMSEQEPAELIEAVTSAYGQV   72 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH---------HHCTTSEECCCCSHHHHHHHHHHHHSCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhh---------CcEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence            7999999999999999999999999999997544333322211         12345888888888877765     799


Q ss_pred             CEEEEccccCCc-CCCccChHHHHH----HhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCC
Q 024488          147 DAVMHFAAVAYV-GESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPI  217 (267)
Q Consensus       147 D~li~~Ag~~~~-~~~~~~~~~~~~----~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~  217 (267)
                      |+||||||.... .+..+.+++.|+    .|..+    ++.++|.|++++.++||++||.+.+.           +.+..
T Consensus        73 DiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~-----------~~~~~  141 (252)
T d1zmta1          73 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG-----------PWKEL  141 (252)
T ss_dssp             CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS-----------CCTTC
T ss_pred             CEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccc-----------ccccc
Confidence            999999997543 344444444443    44444    66789999999889999999987763           45567


Q ss_pred             ChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          218 NPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       218 ~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      .+|++||++++.|++.++.|   +|+++++|.||+|.|...
T Consensus       142 ~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~  182 (252)
T d1zmta1         142 STYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDS  182 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTC
T ss_pred             cccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcch
Confidence            89999999999999999998   689999999998887543

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.95  E-value=2.6e-27  Score=199.85  Aligned_cols=174  Identities=17%  Similarity=0.145  Sum_probs=133.4

Q ss_pred             CCCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc--
Q 024488           66 HEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (267)
Q Consensus        66 ~~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--  143 (267)
                      ++.+ |++|||||++|||+++|++|+++|++|++++++  +.+.+.+..+++...+.++.++.+|++|++++++++++  
T Consensus        15 sL~g-K~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~--~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~   91 (272)
T d1g0oa_          15 SLEG-KVALVTGAGRGIGREMAMELGRRGCKVIVNYAN--STESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV   91 (272)
T ss_dssp             CCTT-CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCC-CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC--chHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHH
Confidence            3455 999999999999999999999999999999863  33334444444444567899999999999999999876  


Q ss_pred             ---CCCCEEEEccccCCcCCCccChHHHHH----HhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCC
Q 024488          144 ---NAFDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEET  212 (267)
Q Consensus       144 ---~~~D~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~  212 (267)
                         +++|++|||||.....+..+..++.|+    .|+.+    ++.++|.|.+  .+++++++|.....          .
T Consensus        92 ~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~--~g~~i~i~s~~~~~----------~  159 (272)
T d1g0oa_          92 KIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI--GGRLILMGSITGQA----------K  159 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT--TCEEEEECCGGGTC----------S
T ss_pred             HHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccc--cccccccccccccc----------c
Confidence               799999999998766655544444443    44444    4446666644  36788887755431          1


Q ss_pred             CCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          213 PQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       213 ~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +.+....|+++|++++.|++.++.|   +|++++.|.||+|.|..
T Consensus       160 ~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~  204 (272)
T d1g0oa_         160 AVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDM  204 (272)
T ss_dssp             SCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChH
Confidence            3455678999999999999999998   68999999999998754

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.95  E-value=8.9e-28  Score=199.17  Aligned_cols=166  Identities=22%  Similarity=0.238  Sum_probs=126.7

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      .+ |++|||||++|||+++|++|+++|++|++++|+.   +++.+..+++   +.++.++++|++++++++++++.    
T Consensus         4 ~g-K~alItGas~GIG~aia~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dls~~~~i~~~~~~i~~~   76 (241)
T d2a4ka1           4 SG-KTILVTGAASGIGRAALDLFAREGASLVAVDREE---RLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEE   76 (241)
T ss_dssp             TT-CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHc---CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            44 9999999999999999999999999999999643   4455555544   56788999999999999998876    


Q ss_pred             -CCCCEEEEccccCCcCCCccChHHHHH----HhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYVGESTLDPLKYYH----NITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~~~~~~~~~~~~----~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                       +++|+||||||.....+..+.+++.|+    .|+.+...    ++|.|.  +.+.++++||.+..            +.
T Consensus        77 ~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~--~~~~i~~~ss~a~~------------~~  142 (241)
T d2a4ka1          77 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLE--EGGSLVLTGSVAGL------------GA  142 (241)
T ss_dssp             HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCC--TTCEEEEECCCTTC------------CH
T ss_pred             hCCccEeccccccccccchhhhhccccccccccccccccccccccccccc--cccceeeccccccc------------cc
Confidence             789999999998766665555555554    44444333    444433  34567777776554            23


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      +....|+.+|++++.|++.+++|   +|+++++|.||.|.|.+
T Consensus       143 ~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~  185 (241)
T d2a4ka1         143 FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPM  185 (241)
T ss_dssp             HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGG
T ss_pred             cCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHH
Confidence            44678999999999999999998   67999999999887754

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=1.1e-27  Score=200.69  Aligned_cols=173  Identities=13%  Similarity=0.059  Sum_probs=131.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHh---CCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLK---DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~---~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +|+++|||||+|||+++|++|++   +|++|++++|+....+++.+.+... ..+.++.++++|++|+++++++++.   
T Consensus         6 gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~-~~~~~~~~~~~Dvs~~~~v~~l~~~~~~   84 (259)
T d1oaaa_           6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQ-QPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHH-CTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhh-cCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            39999999999999999999986   7999999997544333333333332 1245789999999999999988753   


Q ss_pred             ------CCCCEEEEccccCCcC---CCccCh----HHHHHHhHHH----HHHHHHHHHHcC--CCEEEEEeccccccCCC
Q 024488          144 ------NAFDAVMHFAAVAYVG---ESTLDP----LKYYHNITSN----TLVVLESMARHG--VDTLIYSSTCATYGEPE  204 (267)
Q Consensus       144 ------~~~D~li~~Ag~~~~~---~~~~~~----~~~~~~~~~~----~~~~l~~~~~~~--~~~iV~vSS~~~~g~~~  204 (267)
                            +.+|++|||||...+.   ...+.+    +..++.|+.+    ++.++|.|++++  .++||++||.+.+    
T Consensus        85 ~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~----  160 (259)
T d1oaaa_          85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL----  160 (259)
T ss_dssp             SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT----
T ss_pred             hhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccccc----
Confidence                  4678999999975422   222322    3345566666    455666676654  4699999998776    


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc-CCCcEEEEecccccccc
Q 024488          205 KMPITEETPQAPINPYGKAKKMAEDIILDFSKN-SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       205 ~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e-~g~~~~~vrp~~v~~~~  254 (267)
                             .+.+....|++||++++.|+++++.| .|+++++|.||+|.|..
T Consensus       161 -------~~~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~  204 (259)
T d1oaaa_         161 -------QPYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM  204 (259)
T ss_dssp             -------SCCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH
T ss_pred             -------CCCccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHH
Confidence                   25667889999999999999999988 79999999999998854

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.95  E-value=4.2e-27  Score=194.26  Aligned_cols=161  Identities=16%  Similarity=0.128  Sum_probs=127.0

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CCC
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAF  146 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~  146 (267)
                      ++ |++|||||++|||+++|++|+++|++|++++|+.   +    .+++.     ..+++.+|+++.  ++.++++ +++
T Consensus         3 kg-K~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~---~----~l~~~-----~~~~~~~Dv~~~--~~~~~~~~g~i   67 (234)
T d1o5ia_           3 RD-KGVLVLAASRGIGRAVADVLSQEGAEVTICARNE---E----LLKRS-----GHRYVVCDLRKD--LDLLFEKVKEV   67 (234)
T ss_dssp             TT-CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH---H----HHHHT-----CSEEEECCTTTC--HHHHHHHSCCC
T ss_pred             CC-CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH---H----HHHhc-----CCcEEEcchHHH--HHHHHHHhCCC
Confidence            44 9999999999999999999999999999999642   2    22222     345688999863  4555555 689


Q ss_pred             CEEEEccccCCcCCCccChHHHHH----HhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCC
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPIN  218 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~  218 (267)
                      |+||||||.....+..+.+++.|+    .|+.+    ++.++|.|++++.++||++||.....           +.+...
T Consensus        68 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~-----------~~~~~~  136 (234)
T d1o5ia_          68 DILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS-----------PIENLY  136 (234)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTTBH
T ss_pred             cEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccc-----------cccccc
Confidence            999999998766555554444444    44444    56788999998889999999977653           556678


Q ss_pred             hHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          219 PYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       219 ~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                      .|+.+|++++.|++.++.|   +|+++++|.||++.|..
T Consensus       137 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~  175 (234)
T d1o5ia_         137 TSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETER  175 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred             cchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhh
Confidence            9999999999999999998   68999999999888754

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7.9e-28  Score=203.34  Aligned_cols=182  Identities=16%  Similarity=0.077  Sum_probs=132.2

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +++++|||||++|||+++|++|+++ |++|++++|+..   ++.+..+++...+.++.++++|++|.+++++++++    
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~   78 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVT---RGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKE   78 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHH---HHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHH---HHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHh
Confidence            4466799999999999999999986 899999996544   44444444444466889999999999999988876    


Q ss_pred             -CCCCEEEEccccCCcCCCccChHH----HHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccC-CCC--------
Q 024488          144 -NAFDAVMHFAAVAYVGESTLDPLK----YYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGE-PEK--------  205 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~~~~~~~~~----~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~-~~~--------  205 (267)
                       +++|+||||||+.......+..++    .++.|+.++..    ++|.|++  .++||++||.+.... ...        
T Consensus        79 ~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~g~ivnisS~~~~~~~~~~~~y~~~k~  156 (275)
T d1wmaa1          79 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKF  156 (275)
T ss_dssp             HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHH
T ss_pred             cCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccccccceeccccccchhhhhhh
Confidence             789999999999766554444443    34566666544    5555533  479999999755310 000        


Q ss_pred             ---------------------CCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc-------CCCcEEEEeccccccccc
Q 024488          206 ---------------------MPITEETPQAPINPYGKAKKMAEDIILDFSKN-------SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       206 ---------------------~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e-------~g~~~~~vrp~~v~~~~~  255 (267)
                                           .......+..+...|+.||+++..+++.++++       .+++++.+.||+|.|.+.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~  234 (275)
T d1wmaa1         157 RSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA  234 (275)
T ss_dssp             HCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTT
T ss_pred             cccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcc
Confidence                                 00001123345678999999999999887765       389999999999998664

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.4e-26  Score=194.96  Aligned_cols=171  Identities=16%  Similarity=0.153  Sum_probs=133.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----C
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----N  144 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~  144 (267)
                      +|++||||||+|||+++|++|+++|++|++++|+..+.++..+...+.  .+..+..+.+|+.+.+++..+.+.     +
T Consensus        14 GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          14 GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL--GAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--TCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhh--hcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            499999999999999999999999999999996543333332222222  245788899999999988877665     7


Q ss_pred             CCCEEEEccccCCcCCCccChHHH----HHHhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCC
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLKY----YHNITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAP  216 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~~----~~~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~  216 (267)
                      .+|+++||||........+.+.+.    ++.|+.+    ++.++|.|++. .++||++||.+.+           .+.+.
T Consensus        92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~-----------~~~p~  159 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGK-----------VAYPM  159 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGT-----------SCCTT
T ss_pred             CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhc-----------CCCCC
Confidence            899999999987665544444433    3445444    66688888755 4899999998776           25667


Q ss_pred             CChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecccccccc
Q 024488          217 INPYGKAKKMAEDIILDFSKN-----SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       217 ~~~Y~~sK~a~e~l~~~~a~e-----~g~~~~~vrp~~v~~~~  254 (267)
                      ...|++||++++.|+++++.|     .+++++.|.||+|.|..
T Consensus       160 ~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~  202 (269)
T d1xu9a_         160 VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET  202 (269)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcH
Confidence            889999999999999999987     46899999999998854

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.94  E-value=1.6e-26  Score=204.24  Aligned_cols=187  Identities=26%  Similarity=0.263  Sum_probs=141.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC-------------CcchhhhhhhcC-CCCCceEEEEccCCCHH
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG-------------NIGAVKVLQELF-PEPGRLQFIYADLGDAK  135 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~-------------~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~  135 (267)
                      +|+||||||||+||++++++|+++||+|+++|...+.             .....+.+.... ..+.+++++++|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            3889999999999999999999999999999732111             111111111110 01347899999999999


Q ss_pred             HHHHHhhcCCCCEEEEccccCCcCCCc---cChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEEeccccccCCCCCC----
Q 024488          136 AVNKFFSENAFDAVMHFAAVAYVGEST---LDPLKYYHNITSNTLVVLESMARHGVD-TLIYSSTCATYGEPEKMP----  207 (267)
Q Consensus       136 ~v~~~~~~~~~D~li~~Ag~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~vSS~~~~g~~~~~~----  207 (267)
                      .++++++..++|+|||+|+......+.   ..+...+..|+.+|.++++.+.+.+.. ++++.||..+|+......    
T Consensus        81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~  160 (393)
T d1i24a_          81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGY  160 (393)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSE
T ss_pred             HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccccc
Confidence            999999877899999999876543322   234467789999999999999998755 577788888876433110    


Q ss_pred             --C-------CCCCCCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          208 --I-------TEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       208 --~-------~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                        +       ++..+..|.+.|+.||.++|.+++.++++++++++++||+       ++|||+..
T Consensus       161 ~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~-------~v~G~~~~  218 (393)
T d1i24a_         161 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQG-------VVYGVKTD  218 (393)
T ss_dssp             EEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC-------EEECSCCT
T ss_pred             ccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccc-------cccCCCcc
Confidence              1       1123567788999999999999999999999999999999       99999764

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.1e-26  Score=199.02  Aligned_cols=184  Identities=36%  Similarity=0.613  Sum_probs=149.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCC---cc---hhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN---IG---AVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSEN  144 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~---~~---~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~  144 (267)
                      |+||||||||+||++|+++|+++|++|+++++..+..   ..   ..+.++..  ...++.++.+|++|.+.+.+++...
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~l~~~~~~~   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL--TGRSVEFEEMDILDQGALQRLFKKY   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH--HTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh--cCCCcEEEEeecccccccccccccc
Confidence            7899999999999999999999999999998533221   11   11222222  1357899999999999999999877


Q ss_pred             CCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCC-CCCCCCCCChHHHH
Q 024488          145 AFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPIT-EETPQAPINPYGKA  223 (267)
Q Consensus       145 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~-e~~~~~~~~~Y~~s  223 (267)
                      .+|+++|+|+.........++.+.++.|+.++.+++.++.+.+.++||++||..+|+........ +.....+.++|+.+
T Consensus        81 ~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~  160 (346)
T d1ek6a_          81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKS  160 (346)
T ss_dssp             CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHH
T ss_pred             ccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHH
Confidence            88999999998765555667888899999999999999999999999999999999866544333 33345567899999


Q ss_pred             HHHHHHHHHHhhhc-CCCcEEEEeccccccccceeecCCCC
Q 024488          224 KKMAEDIILDFSKN-SDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       224 K~a~e~l~~~~a~e-~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      |.++|..++.+++. .+++.+++||+       ++|||...
T Consensus       161 k~~~e~~~~~~~~~~~~~~~~~lR~~-------~v~G~~~~  194 (346)
T d1ek6a_         161 KFFIEEMIRDLCQADKTWNAVLLRYF-------NPTGAHAS  194 (346)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEEEEEC-------EEECCCTT
T ss_pred             HHHHHHHHHHHHHhccCCceEEEeec-------ceeccCCC
Confidence            99999999998775 69999999999       88887643

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.6e-26  Score=190.67  Aligned_cols=166  Identities=16%  Similarity=0.107  Sum_probs=131.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (267)
                      +|++|||||++|||+++|++|+++|++|++++|+.   +++.+. .+    ...++...+|+.+.+.++...+. +++|+
T Consensus         6 gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~---~~l~~~-~~----~~~~~~~~~d~~~~~~~~~~~~~~~~id~   77 (245)
T d2ag5a1           6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDINE---SKLQEL-EK----YPGIQTRVLDVTKKKQIDQFANEVERLDV   77 (245)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHGGG-GG----STTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCH---HHHHHH-Hh----ccCCceeeeecccccccccccccccccee
Confidence            49999999999999999999999999999999643   222222 22    23578889999999988888776 78999


Q ss_pred             EEEccccCCcCCCccChHHHHH----HhHHH----HHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChH
Q 024488          149 VMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPY  220 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y  220 (267)
                      ||||||.....+..+.+.+.|+    .|+.+    ++.++|.|.+.+.++||++||.+..-          .+.+....|
T Consensus        78 lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~----------~~~~~~~~Y  147 (245)
T d2ag5a1          78 LFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV----------KGVVNRCVY  147 (245)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT----------BCCTTBHHH
T ss_pred             EEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhcc----------CCccchhHH
Confidence            9999999877665554544444    34444    56688888888889999999865420          145567899


Q ss_pred             HHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          221 GKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       221 ~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      +.+|++++.+++.++.|   +|+++++|.||.|.|.
T Consensus       148 ~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~  183 (245)
T d2ag5a1         148 STTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTP  183 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeech
Confidence            99999999999999998   6899999999987763

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.94  E-value=4.5e-26  Score=200.83  Aligned_cols=187  Identities=34%  Similarity=0.499  Sum_probs=151.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHh-CCCeEEEEecCCCCC------cchh---hhhhhcC-----CCCCceEEEEccCCCHH
Q 024488           71 THVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGN------IGAV---KVLQELF-----PEPGRLQFIYADLGDAK  135 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~-~G~~V~~~~r~~~~~------~~~~---~~~~~~~-----~~~~~~~~~~~Dl~d~~  135 (267)
                      |+||||||+||||++|+++|++ .|++|+++|+..+..      +...   ..++...     .......++.+|++|.+
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~   82 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence            5899999999999999999986 699999998532211      1111   1111110     11236788999999999


Q ss_pred             HHHHHhhc-CCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCC-------CCC
Q 024488          136 AVNKFFSE-NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPE-------KMP  207 (267)
Q Consensus       136 ~v~~~~~~-~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~-------~~~  207 (267)
                      .++++++. .++|+|||+|+..........+...++.|..++.+++.++.+.+.+++++.||...|+...       ..+
T Consensus        83 ~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~  162 (383)
T d1gy8a_          83 FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEP  162 (383)
T ss_dssp             HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCC
T ss_pred             HhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCcccccccccccccccccccccccccc
Confidence            99999976 4689999999987655555677788899999999999999999999999999999887443       245


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          208 ITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       208 ~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      +.|+.+..|.+.|+.+|.+.|.+++.+.+.+|++++++||+       ++|||+...
T Consensus       163 ~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~-------~vyG~~~~~  212 (383)
T d1gy8a_         163 IDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYF-------NACGAHEDG  212 (383)
T ss_dssp             BCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC-------EEECCCTTS
T ss_pred             cccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecc-------eeeccCccc
Confidence            67778888999999999999999999999999999999999       999998764

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.94  E-value=5.7e-26  Score=193.55  Aligned_cols=176  Identities=14%  Similarity=0.112  Sum_probs=128.2

Q ss_pred             CCCCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-
Q 024488           65 QHEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-  143 (267)
Q Consensus        65 ~~~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-  143 (267)
                      ...++ |++|||||++|||+++|++|+++|++|++++|+....++..+.+.+.  .+..+.++.+|++|.++++++++. 
T Consensus        21 ~~l~g-K~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~--~g~~~~~~~~D~~~~~~v~~~~~~~   97 (294)
T d1w6ua_          21 NSFQG-KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQ--TGNKVHAIQCDVRDPDMVQNTVSEL   97 (294)
T ss_dssp             TTTTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--HSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCC-CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHh--cCCceEEEEecccChHHHHHHhhhh
Confidence            34455 99999999999999999999999999999996543333333322221  245788999999999999887765 


Q ss_pred             ----CCCCEEEEccccCCcCCCccChHHHHH----HhHHH----HHHHHHHHHH-cCCCEEEEEeccccccCCCCCCCCC
Q 024488          144 ----NAFDAVMHFAAVAYVGESTLDPLKYYH----NITSN----TLVVLESMAR-HGVDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       144 ----~~~D~li~~Ag~~~~~~~~~~~~~~~~----~~~~~----~~~~l~~~~~-~~~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                          +++|+||||||............+.+.    .|...    +...++.+.. ...+.++++||.+...         
T Consensus        98 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~---------  168 (294)
T d1w6ua_          98 IKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET---------  168 (294)
T ss_dssp             HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH---------
T ss_pred             hhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhh---------
Confidence                789999999998766554444333333    33333    2223333433 3456777888866552         


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                        +.+...+|+++|++++.|++.++.|   +|+++++|.||+|.|..
T Consensus       169 --~~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~  213 (294)
T d1w6ua_         169 --GSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKG  213 (294)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             --cccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccch
Confidence              3445778999999999999999988   68999999999888754

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=1.6e-26  Score=193.18  Aligned_cols=172  Identities=15%  Similarity=0.089  Sum_probs=124.3

Q ss_pred             CCCCcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-
Q 024488           67 EEGVTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-  143 (267)
Q Consensus        67 ~~~~k~vlVTGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-  143 (267)
                      +.+ |++|||||+|  |||+++|++|+++|++|++++|+.+.    .+..++.........++++|++|+++++++++. 
T Consensus         6 L~g-K~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (256)
T d1ulua_           6 LSG-KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERL----RPEAEKLAEALGGALLFRADVTQDEELDALFAGV   80 (256)
T ss_dssp             CTT-CEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGG----HHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCC-CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHH----HHHHHHhhhccCcccccccccCCHHHHHHHHHHH
Confidence            345 9999999987  99999999999999999999875322    222222222244678899999999999998876 


Q ss_pred             ----CCCCEEEEccccCCcC----CCccChHH----HHHHhHHHHHHHHHHHHH--cCCCEEEEEeccccccCCCCCCCC
Q 024488          144 ----NAFDAVMHFAAVAYVG----ESTLDPLK----YYHNITSNTLVVLESMAR--HGVDTLIYSSTCATYGEPEKMPIT  209 (267)
Q Consensus       144 ----~~~D~li~~Ag~~~~~----~~~~~~~~----~~~~~~~~~~~~l~~~~~--~~~~~iV~vSS~~~~g~~~~~~~~  209 (267)
                          +++|+||||||.....    ...+..++    .++.|..+...+...+..  ...++||++||.+...        
T Consensus        81 ~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~--------  152 (256)
T d1ulua_          81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK--------  152 (256)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS--------
T ss_pred             HHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcC--------
Confidence                7899999999975321    22233333    334444444444433322  1247899999977752        


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          210 EETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       210 e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                         +.+...+|++||++++.++++++.|   +|+++++|.||.|.+..
T Consensus       153 ---~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~  197 (256)
T d1ulua_         153 ---VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVA  197 (256)
T ss_dssp             ---BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeecc
Confidence               5566789999999999999999998   68999999999887744

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.93  E-value=1.3e-25  Score=187.95  Aligned_cols=169  Identities=17%  Similarity=0.160  Sum_probs=138.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~  145 (267)
                      +++|||||+||||+++|++|+++|+ +|++++|+..+.+...+.++++...+.++.++.+|++|.++++++++.    ++
T Consensus        10 gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~   89 (259)
T d2fr1a1          10 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVP   89 (259)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccccc
Confidence            7999999999999999999999999 588889876666666666666655567899999999999999998876    57


Q ss_pred             CCEEEEccccCCcCCCccChHHH----HHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHH
Q 024488          146 FDAVMHFAAVAYVGESTLDPLKY----YHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYG  221 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~  221 (267)
                      +|.||||||........+...+.    +..|+.+...+.+.+...+.++||++||.+..-           +.+....|+
T Consensus        90 i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~-----------g~~~~~~Ya  158 (259)
T d2fr1a1          90 LSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAF-----------GAPGLGGYA  158 (259)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHT-----------CCTTCTTTH
T ss_pred             ccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhcc-----------CCcccHHHH
Confidence            99999999987666544444433    456677777788888777788999999977762           455678999


Q ss_pred             HHHHHHHHHHHHhhhcCCCcEEEEeccccc
Q 024488          222 KAKKMAEDIILDFSKNSDMAVMILRLVVFF  251 (267)
Q Consensus       222 ~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~  251 (267)
                      ++|++.+.|++.++. .|++++.|+||.+.
T Consensus       159 Aaka~l~~la~~~~~-~Gi~v~~I~pg~~~  187 (259)
T d2fr1a1         159 PGNAYLDGLAQQRRS-DGLPATAVAWGTWA  187 (259)
T ss_dssp             HHHHHHHHHHHHHHH-TTCCCEEEEECCBC
T ss_pred             HHHHhHHHHHHHHHh-CCCCEEECCCCccc
Confidence            999999999999876 59999999999443

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.93  E-value=1.7e-25  Score=186.29  Aligned_cols=175  Identities=17%  Similarity=0.153  Sum_probs=124.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-----
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-----  143 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----  143 (267)
                      |+|||||||+|||+++|++|+++|+  +|++++|+.   +++.+ +++.  .+.++.++.+|++|.++++++++.     
T Consensus         4 KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~---~~~~~-l~~~--~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   77 (250)
T d1yo6a1           4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDV---EKATE-LKSI--KDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSG---GGCHH-HHTC--CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCH---HHHHH-HHHh--hCCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence            8999999999999999999999996  688777643   23322 2222  245799999999999999888765     


Q ss_pred             --CCCCEEEEccccCCc-CCCccC----hHHHHHHhHHH----HHHHHHHHHHcC-----------CCEEEEEecccccc
Q 024488          144 --NAFDAVMHFAAVAYV-GESTLD----PLKYYHNITSN----TLVVLESMARHG-----------VDTLIYSSTCATYG  201 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~-~~~~~~----~~~~~~~~~~~----~~~~l~~~~~~~-----------~~~iV~vSS~~~~g  201 (267)
                        .++|+||||||+... ....+.    .++.++.|+.+    ++.++|.|++.+           .+++|++|+...+-
T Consensus        78 ~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~  157 (250)
T d1yo6a1          78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI  157 (250)
T ss_dssp             GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred             CCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccc
Confidence              259999999998643 222222    33456667676    455788887642           36788888866542


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          202 EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       202 ~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      ....    ...+..+...|++||+++..|++.++.|   .|+++++|.||+|.|.+.
T Consensus       158 ~~~~----~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~  210 (250)
T d1yo6a1         158 TDNT----SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG  210 (250)
T ss_dssp             TTCC----STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----
T ss_pred             cCCc----ccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCC
Confidence            1110    0113344567999999999999999988   589999999999998664

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=1.7e-25  Score=193.91  Aligned_cols=175  Identities=21%  Similarity=0.298  Sum_probs=140.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHH-HhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK-FFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~-~~~~~~~D~  148 (267)
                      |+||||||||+||++++++|+++| ++|+++++......       +. ....+++++.+|+++.+++.+ +.+  ++|+
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~-------~~-~~~~~~~~i~~Di~~~~~~~~~~~~--~~d~   70 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAIS-------RF-LNHPHFHFVEGDISIHSEWIEYHVK--KCDV   70 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGG-------GG-TTCTTEEEEECCTTTCSHHHHHHHH--HCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchh-------hh-ccCCCeEEEECccCChHHHHHHHHh--CCCc
Confidence            369999999999999999999999 58999986432211       11 113579999999998876655 444  7999


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCC-------CCCCCCChHH
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEE-------TPQAPINPYG  221 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~-------~~~~~~~~Y~  221 (267)
                      |||+|+.........++...+..|+.++.++++.+.+.+. +++++||+.+|+........|.       ....|...|+
T Consensus        71 Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~  149 (342)
T d2blla1          71 VLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYS  149 (342)
T ss_dssp             EEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHH
T ss_pred             cccccccccccccccCCccccccccccccccccccccccc-cccccccccccccccccccccccccccccccCCCcchhh
Confidence            9999998766556677788899999999999999988875 7788999999986655443332       2335567899


Q ss_pred             HHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          222 KAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       222 ~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      .||.++|.+++.++++++++++++||+       .+|||...
T Consensus       150 ~sK~~~E~~~~~~~~~~~~~~~i~r~~-------~~~g~~~~  184 (342)
T d2blla1         150 VSKQLLDRVIWAYGEKEGLQFTLFRPF-------NWMGPRLD  184 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEEC-------SEECSSCC
T ss_pred             hcccchhhhhhhhhcccCceeEEeecc-------cccccccc
Confidence            999999999999999999999999999       88887543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.93  E-value=7e-25  Score=190.73  Aligned_cols=183  Identities=20%  Similarity=0.188  Sum_probs=148.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||||+||++++++|+++|++|++++|...+.....+..    .....++++.+|++|++.+.++++...+|+++
T Consensus         9 KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~----~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~   84 (356)
T d1rkxa_           9 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETA----RVADGMQSEIGDIRDQNKLLESIREFQPEIVF   84 (356)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHT----TTTTTSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhh----hcccCCeEEEeeccChHhhhhhhhhchhhhhh
Confidence            99999999999999999999999999999998665544433322    12347899999999999999999877899999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEEecccccc-CCCCCCCCCCCCCCCCChHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSSTCATYG-EPEKMPITEETPQAPINPYGKAKKMAE  228 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~vSS~~~~g-~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (267)
                      |+|+..........+...+..|+.++.+++.++.+.+.. .+++.||...+. .....+.+|+.+..|.+.|+.+|.+.|
T Consensus        85 ~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e  164 (356)
T d1rkxa_          85 HMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAE  164 (356)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHH
T ss_pred             hhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccch
Confidence            999976555556778889999999999999999987654 455555554443 334456777888888999999999999


Q ss_pred             HHHHHhhhc---------CCCcEEEEeccccccccceeecCCCCC
Q 024488          229 DIILDFSKN---------SDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       229 ~l~~~~a~e---------~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      .++..++.+         +++.++++||+       ++|||++.+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~-------~vyGp~~~~  202 (356)
T d1rkxa_         165 LVTSSYRNSFFNPANYGQHGTAVATVRAG-------NVIGGGDWA  202 (356)
T ss_dssp             HHHHHHHHHHSCGGGHHHHCCEEEEEECC-------CEECTTCCC
T ss_pred             hhhhHHhhhcccchhccccCceEEeccCC-------CeeCCCcch
Confidence            999888764         46789999999       999998643

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.92  E-value=5.1e-25  Score=191.27  Aligned_cols=181  Identities=19%  Similarity=0.186  Sum_probs=137.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|+||||||+|+||++++++|+++|++|+++.|+..+.+...+.. ...........+.+|+.|.+++.+++.  ++|++
T Consensus        11 gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~~~v   87 (342)
T d1y1pa1          11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRW-DAKYPGRFETAVVEDMLKQGAYDEVIK--GAAGV   87 (342)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-HHHSTTTEEEEECSCTTSTTTTTTTTT--TCSEE
T ss_pred             cCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhh-hccccccccEEEeccccchhhhhhhcc--cchhh
Confidence            499999999999999999999999999999987543322222211 111222344567799999999988887  89999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEEeccccccCCC--C--C----------------CC
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARH-GVDTLIYSSTCATYGEPE--K--M----------------PI  208 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~iV~vSS~~~~g~~~--~--~----------------~~  208 (267)
                      +|+|+...   ....+...+..|+.+|.++++.+.+. +.++||++||+++++...  .  .                .+
T Consensus        88 ~~~a~~~~---~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  164 (342)
T d1y1pa1          88 AHIASVVS---FSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTL  164 (342)
T ss_dssp             EECCCCCS---CCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHS
T ss_pred             hhhccccc---ccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccc
Confidence            99998653   33456777888999999999999886 579999999976543211  1  1                12


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHhhhc--CCCcEEEEeccccccccceeecCCCC
Q 024488          209 TEETPQAPINPYGKAKKMAEDIILDFSKN--SDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e--~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      .|..+..+...|+.||.++|.+++.++++  .++++++++|+       ++|||...
T Consensus       165 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~-------~v~Gp~~~  214 (342)
T d1y1pa1         165 PESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPN-------YTIGTIFD  214 (342)
T ss_dssp             CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEES-------EEECCCSC
T ss_pred             cccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceeccc-------ceeCCCCC
Confidence            34445556778999999999999999887  45778999999       89998643

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.92  E-value=2.9e-24  Score=184.97  Aligned_cols=183  Identities=25%  Similarity=0.368  Sum_probs=142.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEE
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMH  151 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li~  151 (267)
                      +||||||||+||++++++|+++|++|+++++..+..  ..+.+..+. ...+++++.+|++|.+++.++++..++|+|||
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~--~~~~~~~~~-~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih   78 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKG--ATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITKYMPDSCFH   78 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTT--HHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccc--chhHHHHhh-ccCCcEEEEcccCCHHHHHHHHHhcCCceEEe
Confidence            699999999999999999999999999998533322  112222221 23578999999999999999998767899999


Q ss_pred             ccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccc-cccCCCCC----------------CCCCCCCC
Q 024488          152 FAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCA-TYGEPEKM----------------PITEETPQ  214 (267)
Q Consensus       152 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~-~~g~~~~~----------------~~~e~~~~  214 (267)
                      +|+.........++...++.|+.+|.++++++.+.+..++|+.||.. .++.....                ...+..+.
T Consensus        79 ~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (338)
T d1orra_          79 LAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQL  158 (338)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCC
T ss_pred             ecccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCcc
Confidence            99987554455677889999999999999999999877666666544 44433221                12334456


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          215 APINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      .+.+.|+.+|...|.+...+.+.++.....++++       ++|++...+
T Consensus       159 ~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  201 (338)
T d1orra_         159 DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHS-------SMYGGRQFA  201 (338)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC-------CEECTTCCC
T ss_pred             ccccccccccchhhhhhhhhhhccCccccccccc-------ceeeccccc
Confidence            6788999999999999999999999999999999       888765543

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=2e-24  Score=178.27  Aligned_cols=160  Identities=16%  Similarity=0.172  Sum_probs=117.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc------
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (267)
                      +|+||||||++|||+++|++|+++|++|+++++.....             ......+.+|..+.++.+.+.+.      
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-------------ASASVIVKMTDSFTEQADQVTAEVGKLLG   68 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT-------------SSEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-------------ccccceeecccCcHHHHHHHHHHHHHHhC
Confidence            49999999999999999999999999999998644321             11334456676666655544332      


Q ss_pred             -CCCCEEEEccccCCc-CCCccChHH----HHHHhHHHHHH----HHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYV-GESTLDPLK----YYHNITSNTLV----VLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~-~~~~~~~~~----~~~~~~~~~~~----~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                       +++|+||||||.... ....+.+.+    .++.|+.++..    ++|.|.  +.++||++||.+...           +
T Consensus        69 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~--~~G~Iv~isS~~~~~-----------~  135 (236)
T d1dhra_          69 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLK--EGGLLTLAGAKAALD-----------G  135 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEE--EEEEEEEECCGGGGS-----------C
T ss_pred             CCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcc--cccceeEEccHHHcC-----------C
Confidence             579999999996433 233334333    34555555444    555553  347999999988763           5


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhc-----CCCcEEEEeccccccccc
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKN-----SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e-----~g~~~~~vrp~~v~~~~~  255 (267)
                      .+....|++||++++.|+++++.|     .|++++.|.||+|.|...
T Consensus       136 ~~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~  182 (236)
T d1dhra_         136 TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN  182 (236)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH
T ss_pred             ccCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcc
Confidence            566789999999999999999987     369999999999988553

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=7.2e-24  Score=176.10  Aligned_cols=171  Identities=19%  Similarity=0.237  Sum_probs=129.4

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---  143 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---  143 (267)
                      +++ |++|||||++|||+++|++|+++|++|++++|+.   +.+.+..+++   +.......+|+.+.++++.....   
T Consensus         3 lkG-KvalITGas~GIG~aia~~la~~G~~V~~~~r~~---~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (248)
T d2o23a1           3 VKG-LVAVITGGASGLGLATAERLVGQGASAVLLDLPN---SGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKG   75 (248)
T ss_dssp             CTT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTT---SSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh---HHHHHHHHHh---CCCccccccccccccccccccccccc
Confidence            355 9999999999999999999999999999999654   3444444554   34678889999998888776654   


Q ss_pred             --CCCCEEEEccccCCcCC------CccChH----HHHHHhHHH----HHHHHHHHHHc------CCCEEEEEecccccc
Q 024488          144 --NAFDAVMHFAAVAYVGE------STLDPL----KYYHNITSN----TLVVLESMARH------GVDTLIYSSTCATYG  201 (267)
Q Consensus       144 --~~~D~li~~Ag~~~~~~------~~~~~~----~~~~~~~~~----~~~~l~~~~~~------~~~~iV~vSS~~~~g  201 (267)
                        ...|.+++|+++.....      ..+...    ..++.|+.+    ++.++|.|.+.      +.++||++||.+.+-
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~  155 (248)
T d2o23a1          76 KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE  155 (248)
T ss_dssp             HHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred             ccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc
Confidence              67899999987643322      222223    334455555    44566665543      457999999988763


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          202 EPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       202 ~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                                 +.+...+|++||++++.|++.++.|   +|+++++|.||++.|...
T Consensus       156 -----------~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~  201 (248)
T d2o23a1         156 -----------GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLL  201 (248)
T ss_dssp             -----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--
T ss_pred             -----------CCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchh
Confidence                       5566889999999999999999998   689999999999888653

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.91  E-value=4.1e-24  Score=176.29  Aligned_cols=158  Identities=18%  Similarity=0.204  Sum_probs=114.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhh-------c
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFS-------E  143 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~-------~  143 (267)
                      .+||||||++|||+++|++|+++|++|++++|+....             ......+.+|+.+.++.....+       .
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ-------------ADSNILVDGNKNWTEQEQSILEQTASSLQG   69 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT-------------SSEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc-------------ccccceeccccCchhHHHHHHHHHHHHhcC
Confidence            5789999999999999999999999999999754321             1123345567765555443332       2


Q ss_pred             CCCCEEEEccccCCc-CCCccChHHH----HHHhHHHHH----HHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCC
Q 024488          144 NAFDAVMHFAAVAYV-GESTLDPLKY----YHNITSNTL----VVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQ  214 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~-~~~~~~~~~~----~~~~~~~~~----~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~  214 (267)
                      +++|+||||||.... ....++..+.    ++.|+.++.    .++|.|++  .++||++||.+.+.           +.
T Consensus        70 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~Iv~isS~~~~~-----------~~  136 (235)
T d1ooea_          70 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMG-----------PT  136 (235)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGS-----------CC
T ss_pred             CCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc--ceEEEEeccHHhcC-----------Cc
Confidence            789999999997543 2333333333    455555543    35555533  47999999987763           55


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhc-----CCCcEEEEecccccccc
Q 024488          215 APINPYGKAKKMAEDIILDFSKN-----SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       215 ~~~~~Y~~sK~a~e~l~~~~a~e-----~g~~~~~vrp~~v~~~~  254 (267)
                      +.+.+|++||++++.|+++++.|     .+++++.|.||++.|..
T Consensus       137 ~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~  181 (235)
T d1ooea_         137 PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM  181 (235)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH
T ss_pred             ccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcc
Confidence            66889999999999999999987     36789999999998854

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=5e-23  Score=166.11  Aligned_cols=155  Identities=15%  Similarity=0.196  Sum_probs=122.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +||+|+||||||+||++++++|+++|++|+++.|++.+...         .....++++.+|++|.+++.++++  ++|+
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~---------~~~~~~~~~~gD~~d~~~l~~al~--~~d~   70 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS---------EGPRPAHVVVGDVLQAADVDKTVA--GQDA   70 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS---------SSCCCSEEEESCTTSHHHHHHHHT--TCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc---------ccccccccccccccchhhHHHHhc--CCCE
Confidence            47999999999999999999999999999999975433211         113468899999999999999998  7899


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (267)
                      |||++|.......       .+.+..+++++++++.+.+.+++|++||..+++....       ..+....|...|.+.|
T Consensus        71 vi~~~g~~~~~~~-------~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~-------~~~~~~~~~~~~~~~e  136 (205)
T d1hdoa_          71 VIVLLGTRNDLSP-------TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK-------VPPRLQAVTDDHIRMH  136 (205)
T ss_dssp             EEECCCCTTCCSC-------CCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTC-------SCGGGHHHHHHHHHHH
T ss_pred             EEEEeccCCchhh-------hhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcc-------ccccccccchHHHHHH
Confidence            9999986432111       1244567889999999999999999999888754321       2233457888999999


Q ss_pred             HHHHHhhhcCCCcEEEEecccccc
Q 024488          229 DIILDFSKNSDMAVMILRLVVFFT  252 (267)
Q Consensus       229 ~l~~~~a~e~g~~~~~vrp~~v~~  252 (267)
                      .+++.    .+++++++||+.+++
T Consensus       137 ~~l~~----~~~~~tiirp~~~~~  156 (205)
T d1hdoa_         137 KVLRE----SGLKYVAVMPPHIGD  156 (205)
T ss_dssp             HHHHH----TCSEEEEECCSEEEC
T ss_pred             HHHHh----cCCceEEEecceecC
Confidence            87765    799999999995543

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.90  E-value=1.3e-23  Score=177.55  Aligned_cols=171  Identities=17%  Similarity=0.088  Sum_probs=114.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC-CCcchhhhhhhcCCC---------------CCceEEEEccCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR-GNIGAVKVLQELFPE---------------PGRLQFIYADLGD  133 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~---------------~~~~~~~~~Dl~d  133 (267)
                      ++++|||||++|||+++|++|+++|++|++++++.. ..+.+.+.+.+....               ...+..+.+|+++
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence            578999999999999999999999999999886322 111222222222110               1123345567999


Q ss_pred             HHHHHHHhhc-----CCCCEEEEccccCCcCCCccChHHH------------------HHHhHHHHHHHHHHHH------
Q 024488          134 AKAVNKFFSE-----NAFDAVMHFAAVAYVGESTLDPLKY------------------YHNITSNTLVVLESMA------  184 (267)
Q Consensus       134 ~~~v~~~~~~-----~~~D~li~~Ag~~~~~~~~~~~~~~------------------~~~~~~~~~~~l~~~~------  184 (267)
                      .++++++++.     +++|+||||||...+.+..+.+++.                  +..|..+...+...+.      
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            9999988875     7999999999987655543333222                  2333333333332221      


Q ss_pred             ----HcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccc
Q 024488          185 ----RHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFF  251 (267)
Q Consensus       185 ----~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~  251 (267)
                          +.+.++||+++|....           .+.+...+|+.||++++.|++.++.|   +|+++++|.||++.
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~-----------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~  224 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTN-----------QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSV  224 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTT-----------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBC
T ss_pred             HHHhcCCCCccccccccccc-----------CCccceeeeccccccchhhhHHHHHHhCCcccccccccccccc
Confidence                2234678888886664           25566789999999999999999998   68999999999643

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=8.6e-23  Score=170.35  Aligned_cols=171  Identities=16%  Similarity=0.120  Sum_probs=122.4

Q ss_pred             CcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----
Q 024488           70 VTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----  143 (267)
Q Consensus        70 ~k~vlVTGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----  143 (267)
                      +|+||||||++  |||+++|+.|+++|++|++++|+....+.+    ++..........+..|+.+..++.+.+++    
T Consensus         5 gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           5 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV----EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHHHhhcCCcceeecccchHHHHHHHHHHhhhc
Confidence            39999999998  899999999999999999999764322222    22222234667889999999988887765    


Q ss_pred             -CCCCEEEEccccCCcCCCc-----cChHHHHHHhHHH----HHHHHHHHHH--cCCCEEEEEeccccccCCCCCCCCCC
Q 024488          144 -NAFDAVMHFAAVAYVGEST-----LDPLKYYHNITSN----TLVVLESMAR--HGVDTLIYSSTCATYGEPEKMPITEE  211 (267)
Q Consensus       144 -~~~D~li~~Ag~~~~~~~~-----~~~~~~~~~~~~~----~~~~l~~~~~--~~~~~iV~vSS~~~~g~~~~~~~~e~  211 (267)
                       +++|++||||+........     ....+.+..+...    ...+...+..  .+.+.||++||.+..           
T Consensus        81 ~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~-----------  149 (258)
T d1qsga_          81 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE-----------  149 (258)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT-----------
T ss_pred             ccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhc-----------
Confidence             7899999999875433221     1222333333333    2223333322  234578889987654           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          212 TPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       212 ~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                      .+.+....|+.||++++.|++.++.|   +|+++++|+||.|.|...
T Consensus       150 ~~~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~  196 (258)
T d1qsga_         150 RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAA  196 (258)
T ss_dssp             SBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTG
T ss_pred             cCCCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccc
Confidence            24556789999999999999999998   689999999998887553

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.88  E-value=2e-22  Score=169.13  Aligned_cols=157  Identities=24%  Similarity=0.263  Sum_probs=133.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||||+||++++++|.++||+|+.++|.                        ++|++|.++++++++..++|+||
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~------------------------~~D~~d~~~~~~~l~~~~~d~vi   57 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ------------------------DLDITNVLAVNKFFNEKKPNVVI   57 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT------------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeech------------------------hccCCCHHHHHHHHHHcCCCEEE
Confidence            569999999999999999999999999998852                        15899999999999877889999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (267)
                      |+|+..........++.....|...+..+...+.... ..+++.||..+|+.....+..|.++..+...|+.+|.+.|.+
T Consensus        58 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~  136 (281)
T d1vl0a_          58 NCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-AEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENF  136 (281)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             eeccccccccccccchhhccccccccccccccccccc-ccccccccceeeeccccccccccccccchhhhhhhhhHHHHH
Confidence            9998765544556667777777777777777776654 588889999999988888899999999999999999999998


Q ss_pred             HHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          231 ILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       231 ~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      ++.    .+.+.+++||+       ++|||+..
T Consensus       137 ~~~----~~~~~~i~R~~-------~vyG~~~~  158 (281)
T d1vl0a_         137 VKA----LNPKYYIVRTA-------WLYGDGNN  158 (281)
T ss_dssp             HHH----HCSSEEEEEEC-------SEESSSSC
T ss_pred             HHH----hCCCcccccee-------EEeCCCcc
Confidence            876    57899999999       99998753

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.88  E-value=2.2e-22  Score=169.34  Aligned_cols=172  Identities=14%  Similarity=0.089  Sum_probs=121.2

Q ss_pred             CCCcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc--
Q 024488           68 EGVTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (267)
Q Consensus        68 ~~~k~vlVTGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--  143 (267)
                      ++ |++|||||+|  |||+++|++|+++|++|++++|+..    +.+.++++...+....++.+|+++.+++++++++  
T Consensus         4 ~g-K~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~----~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~   78 (274)
T d2pd4a1           4 KG-KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES----LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVK   78 (274)
T ss_dssp             TT-CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT----THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CC-CEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHH
Confidence            44 9999999876  8999999999999999999997532    2233333333345677889999999999888866  


Q ss_pred             ---CCCCEEEEccccCCcCCC----ccChHHHHHHhHHH----HHHHHHHHHHc-C-CCEEEEEeccccccCCCCCCCCC
Q 024488          144 ---NAFDAVMHFAAVAYVGES----TLDPLKYYHNITSN----TLVVLESMARH-G-VDTLIYSSTCATYGEPEKMPITE  210 (267)
Q Consensus       144 ---~~~D~li~~Ag~~~~~~~----~~~~~~~~~~~~~~----~~~~l~~~~~~-~-~~~iV~vSS~~~~g~~~~~~~~e  210 (267)
                         +++|++|||||.......    .......+..+...    .......+.+. + ...|+++|+.+...         
T Consensus        79 ~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~---------  149 (274)
T d2pd4a1          79 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK---------  149 (274)
T ss_dssp             HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS---------
T ss_pred             HHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccc---------
Confidence               789999999997543221    11222222222222    22233333222 2 34566666666553         


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          211 ETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       211 ~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                        +......|+.+|++++.++++++.|   +|+++++|.||++.|...
T Consensus       150 --~~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~  195 (274)
T d2pd4a1         150 --YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLAS  195 (274)
T ss_dssp             --BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred             --ccccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccc
Confidence              4455678999999999999999998   789999999998887543

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.88  E-value=3e-22  Score=165.12  Aligned_cols=157  Identities=21%  Similarity=0.219  Sum_probs=117.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc----CCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE----NAF  146 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~----~~~  146 (267)
                      |++|||||++|||+++|++|+++|++|++++|+..               ..+...+++|+++......+...    ...
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~---------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   66 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE---------------GEDLIYVEGDVTREEDVRRAVARAQEEAPL   66 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC---------------SSSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc---------------cccceEeeccccchhhhHHHHHhhhccccc
Confidence            89999999999999999999999999999997432               22466788999998877776654    456


Q ss_pred             CEEEEccccCCcC----CCcc----ChHHHHHHhHHHH----HHHHHHH------HHcCCCEEEEEeccccccCCCCCCC
Q 024488          147 DAVMHFAAVAYVG----ESTL----DPLKYYHNITSNT----LVVLESM------ARHGVDTLIYSSTCATYGEPEKMPI  208 (267)
Q Consensus       147 D~li~~Ag~~~~~----~~~~----~~~~~~~~~~~~~----~~~l~~~------~~~~~~~iV~vSS~~~~g~~~~~~~  208 (267)
                      +.++++++.....    ....    ..+..++.|..+.    +.+++.+      .+++.++||++||.+.+-       
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~-------  139 (241)
T d1uaya_          67 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE-------  139 (241)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH-------
T ss_pred             cchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhcc-------
Confidence            7777777653221    1111    2233445555543    3344443      334568999999988762       


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          209 TEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       209 ~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                          +.+....|+++|++++.|+++++.|   +|+++++|.||+|.|.
T Consensus       140 ----~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~  183 (241)
T d1uaya_         140 ----GQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTP  183 (241)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSH
T ss_pred             ----CCCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCccccc
Confidence                4566889999999999999999998   6899999999988874

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=6.7e-22  Score=162.44  Aligned_cols=155  Identities=12%  Similarity=0.059  Sum_probs=123.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      |+||||||||+||++++++|+++|.  +|+++.|++.+....         ....+....+|+.+.+++.+.++  ++|+
T Consensus        15 k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~---------~~~~i~~~~~D~~~~~~~~~~~~--~~d~   83 (232)
T d2bkaa1          15 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE---------AYKNVNQEVVDFEKLDDYASAFQ--GHDV   83 (232)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG---------GGGGCEEEECCGGGGGGGGGGGS--SCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc---------ccceeeeeeeccccccccccccc--cccc
Confidence            8999999999999999999999995  899999855332211         02356777889999888888887  7899


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (267)
                      +||+||...   ......+.++.|+.++.++++++.+.+.++||++||..++.             .+.+.|+.+|..+|
T Consensus        84 vi~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~-------------~~~~~Y~~~K~~~E  147 (232)
T d2bkaa1          84 GFCCLGTTR---GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK-------------SSNFLYLQVKGEVE  147 (232)
T ss_dssp             EEECCCCCH---HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT-------------TCSSHHHHHHHHHH
T ss_pred             ccccccccc---cccchhhhhhhcccccceeeecccccCccccccCCcccccc-------------CccchhHHHHHHhh
Confidence            999998642   22344566788999999999999999999999999988763             23568999999999


Q ss_pred             HHHHHhhhcCCC-cEEEEeccccccccceeecCCCC
Q 024488          229 DIILDFSKNSDM-AVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       229 ~l~~~~a~e~g~-~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      ..+..    .+. +++++||+       .+||++..
T Consensus       148 ~~l~~----~~~~~~~IlRP~-------~i~G~~~~  172 (232)
T d2bkaa1         148 AKVEE----LKFDRYSVFRPG-------VLLCDRQE  172 (232)
T ss_dssp             HHHHT----TCCSEEEEEECC-------EEECTTGG
T ss_pred             hcccc----ccccceEEecCc-------eeecCCCc
Confidence            87765    455 48999999       77777543

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.86  E-value=3.5e-21  Score=160.87  Aligned_cols=170  Identities=18%  Similarity=0.165  Sum_probs=111.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCC-cchhhhhhhcCCCCCceEEEEccCCC----HHHHHHHhhc--
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN-IGAVKVLQELFPEPGRLQFIYADLGD----AKAVNKFFSE--  143 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d----~~~v~~~~~~--  143 (267)
                      +++||||||+|||+++|++|+++|++|++++|+..+. +++.+++.+.  .+.....+..|+.+    .+.++++++.  
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA--RAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   79 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--STTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhh--cCCceEEEecccccchhHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999743221 2222233332  23466666666543    4555555443  


Q ss_pred             ---CCCCEEEEccccCCcCCCccC-----------hHHH----HHHhHHHHHHHHHHHHH---------cCCCEEEEEec
Q 024488          144 ---NAFDAVMHFAAVAYVGESTLD-----------PLKY----YHNITSNTLVVLESMAR---------HGVDTLIYSST  196 (267)
Q Consensus       144 ---~~~D~li~~Ag~~~~~~~~~~-----------~~~~----~~~~~~~~~~~l~~~~~---------~~~~~iV~vSS  196 (267)
                         +++|+||||||+..+......           .+..    +..|.............         ...+.++++|+
T Consensus        80 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (266)
T d1mxha_          80 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD  159 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred             HHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhh
Confidence               789999999998654432111           1111    11122221111111111         12356777777


Q ss_pred             cccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccc
Q 024488          197 CATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTL  253 (267)
Q Consensus       197 ~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~  253 (267)
                      .....           +.+....|+.||++++.+++.++.+   +|++++.|.||++.+.
T Consensus       160 ~~~~~-----------~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~  208 (266)
T d1mxha_         160 AMTDL-----------PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP  208 (266)
T ss_dssp             GGGGS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred             ccccc-----------cCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEecc
Confidence            66652           5566889999999999999999998   6899999999977763

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.86  E-value=2.8e-21  Score=163.01  Aligned_cols=152  Identities=20%  Similarity=0.245  Sum_probs=125.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+||||||+|+||++++++|.++|+.|. +++....                    +.+|++|.+.++++++..++|+||
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v~-~~~~~~~--------------------~~~Dl~~~~~~~~~i~~~~~D~Vi   59 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLIA-LDVHSKE--------------------FCGDFSNPKGVAETVRKLRPDVIV   59 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEEE-ECTTCSS--------------------SCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEE-EECCCcc--------------------ccCcCCCHHHHHHHHHHcCCCEEE
Confidence            4699999999999999999999987554 4432110                    247999999999999877889999


Q ss_pred             EccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 024488          151 HFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDI  230 (267)
Q Consensus       151 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l  230 (267)
                      |+||.......+..+...+..|..++..++.++.+.+ .+++++||..+|+.....+++|+.+..|.+.|+.+|.++|.+
T Consensus        60 h~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~  138 (298)
T d1n2sa_          60 NAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKA  138 (298)
T ss_dssp             ECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred             EecccccccccccCccccccccccccccchhhhhccc-cccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhh
Confidence            9999876656677888899999999999999997766 589999999999888888999999999999999999999998


Q ss_pred             HHHhhhcCCCcEEEEecc
Q 024488          231 ILDFSKNSDMAVMILRLV  248 (267)
Q Consensus       231 ~~~~a~e~g~~~~~vrp~  248 (267)
                      .....    ....+++++
T Consensus       139 ~~~~~----~~~~~~~~~  152 (298)
T d1n2sa_         139 LQDNC----PKHLIFRTS  152 (298)
T ss_dssp             HHHHC----SSEEEEEEC
T ss_pred             HHhhh----ccccccccc
Confidence            87743    344555555

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.85  E-value=8.3e-21  Score=158.89  Aligned_cols=170  Identities=12%  Similarity=0.076  Sum_probs=114.9

Q ss_pred             CCCcEEEEEcC--CChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc--
Q 024488           68 EGVTHVLVTGG--AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE--  143 (267)
Q Consensus        68 ~~~k~vlVTGa--sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--  143 (267)
                      .+ |++|||||  +.|||+++|++|+++|++|++++|+   .++..+.+.+.  .+.+...+++|+++.++++.+++.  
T Consensus         5 ~g-K~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~---~~~~~~~~~~~--~~~~~~~~~~dv~~~~~~~~~~~~v~   78 (268)
T d2h7ma1           5 DG-KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFD---RLRLIQRITDR--LPAKAPLLELDVQNEEHLASLAGRVT   78 (268)
T ss_dssp             TT-CEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECS---CHHHHHHHHTT--SSSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CC-CEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCC---hHHHHHHHHHH--cCCceeeEeeecccccccccccchhh
Confidence            44 99999995  4689999999999999999999853   33443433332  245678899999999887776554  


Q ss_pred             ------CCCCEEEEccccCCcC-----CCccChHHHHHHhHHH----HHHHHHHHHHc-CCCEEEEEeccccccCCCCCC
Q 024488          144 ------NAFDAVMHFAAVAYVG-----ESTLDPLKYYHNITSN----TLVVLESMARH-GVDTLIYSSTCATYGEPEKMP  207 (267)
Q Consensus       144 ------~~~D~li~~Ag~~~~~-----~~~~~~~~~~~~~~~~----~~~~l~~~~~~-~~~~iV~vSS~~~~g~~~~~~  207 (267)
                            +.+|++|||||.....     +..+...+.+...+..    ........... +.+.+++++|....       
T Consensus        79 ~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~-------  151 (268)
T d2h7ma1          79 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-------  151 (268)
T ss_dssp             HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-------
T ss_pred             hccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccc-------
Confidence                  5689999999975322     1222223333322222    22222222211 22344444443333       


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEecccccccc
Q 024488          208 ITEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       208 ~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~  254 (267)
                          .+.+....|+.+|++.+++++.++.|   +|+++++|.||.|.|..
T Consensus       152 ----~~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~  197 (268)
T d2h7ma1         152 ----RAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLA  197 (268)
T ss_dssp             ----SCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHH
T ss_pred             ----ccCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChh
Confidence                24455789999999999999999998   68999999999888754

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=5.1e-20  Score=155.72  Aligned_cols=170  Identities=24%  Similarity=0.334  Sum_probs=123.6

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHH-HHHhhc---CCCC
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAV-NKFFSE---NAFD  147 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v-~~~~~~---~~~D  147 (267)
                      ||||||||+||++++++|+++|+ +|+++++..+..+. . .+.+.         ..+|..+.++. ......   ..++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~-~-~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~   70 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V-NLVDL---------NIADYMDKEDFLIQIMAGEEFGDVE   70 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-H-HHHTS---------CCSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchh-h-ccccc---------chhhhccchHHHHHHhhhhcccchh
Confidence            89999999999999999999996 78888753332111 1 11111         11233333332 222221   4688


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (267)
                      +++|.|+....  .....+.....++.++..++..+.+.+.+ +|+.||..+++........++.+..+.+.|+.+|.+.
T Consensus        71 ~i~~~aa~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~  147 (307)
T d1eq2a_          71 AIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLF  147 (307)
T ss_dssp             EEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTCC-EEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHH
T ss_pred             hhhhhcccccc--ccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccchh
Confidence            99999986433  23455667788888999999999888764 6666666666555555566666778899999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEeccccccccceeecCCCC
Q 024488          228 EDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       228 e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      |.+++.+.++++++++++||+       ++|||+..
T Consensus       148 e~~~~~~~~~~~~~~~~~r~~-------~vyGp~~~  176 (307)
T d1eq2a_         148 DEYVRQILPEANSQIVGFRYF-------NVYGPREG  176 (307)
T ss_dssp             HHHHHHHGGGCSSCEEEEEEC-------EEESSSCG
T ss_pred             hhhccccccccccccccccce-------eEeecccc
Confidence            999999999999999999999       99999764

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.84  E-value=1.1e-20  Score=163.08  Aligned_cols=170  Identities=11%  Similarity=-0.012  Sum_probs=111.0

Q ss_pred             CcEEEEEc--CCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhh---------hhhhcCCCCCceEEEEc---------
Q 024488           70 VTHVLVTG--GAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVK---------VLQELFPEPGRLQFIYA---------  129 (267)
Q Consensus        70 ~k~vlVTG--asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~---------~~~~~~~~~~~~~~~~~---------  129 (267)
                      .|++||||  +++|||+++|++|+++|++|+++++..........         ................+         
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            48999999  56899999999999999999998864321111100         00000000112223333         


Q ss_pred             -----------cCCCHHHHHHHhhc-----CCCCEEEEccccCCc--CCCccChHHHHH----HhHHH----HHHHHHHH
Q 024488          130 -----------DLGDAKAVNKFFSE-----NAFDAVMHFAAVAYV--GESTLDPLKYYH----NITSN----TLVVLESM  183 (267)
Q Consensus       130 -----------Dl~d~~~v~~~~~~-----~~~D~li~~Ag~~~~--~~~~~~~~~~~~----~~~~~----~~~~l~~~  183 (267)
                                 |+++.++++++++.     +++|+||||||....  .+..+.+.+.|+    .|..+    ++.++|.|
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                       55555556655554     799999999997542  233333344443    33333    34444444


Q ss_pred             HHcCCCEEEEEeccccccCCCCCCCCCCCCCC-CCChHHHHHHHHHHHHHHhhhc----CCCcEEEEecccccc
Q 024488          184 ARHGVDTLIYSSTCATYGEPEKMPITEETPQA-PINPYGKAKKMAEDIILDFSKN----SDMAVMILRLVVFFT  252 (267)
Q Consensus       184 ~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~-~~~~Y~~sK~a~e~l~~~~a~e----~g~~~~~vrp~~v~~  252 (267)
                      .  ..++||++||.+...           +.+ +...|+.+|++++.|++.++.|    +||+|+.|.||.|.|
T Consensus       162 ~--~~GsIv~iss~~~~~-----------~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T  222 (329)
T d1uh5a_         162 K--PQSSIISLTYHASQK-----------VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS  222 (329)
T ss_dssp             E--EEEEEEEEECGGGTS-----------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred             c--cccccccceeehhcc-----------cccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence            3  247899999877652           233 3567999999999999999987    489999999999987

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.81  E-value=4.4e-20  Score=156.70  Aligned_cols=178  Identities=13%  Similarity=0.005  Sum_probs=106.4

Q ss_pred             CCCCCcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEEecCCCCCcchhh------hhhhcCCCCC--c-eEEEEcc--C-
Q 024488           66 HEEGVTHVLVTGGAG--YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVK------VLQELFPEPG--R-LQFIYAD--L-  131 (267)
Q Consensus        66 ~~~~~k~vlVTGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~------~~~~~~~~~~--~-~~~~~~D--l-  131 (267)
                      .+.+ |++|||||+|  |||+++|++|+++|++|++++|+........+      ...+......  + -....+|  + 
T Consensus         5 ~L~g-K~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           5 DLRG-KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCTT-CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             CCCC-CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            3455 9999999886  99999999999999999999864311100000      0000000011  1 1122222  1 


Q ss_pred             -----------------CCHHHHHHHhhc-----CCCCEEEEccccCC--cCCCccChHHHH----HHhHHHHHHHHHHH
Q 024488          132 -----------------GDAKAVNKFFSE-----NAFDAVMHFAAVAY--VGESTLDPLKYY----HNITSNTLVVLESM  183 (267)
Q Consensus       132 -----------------~d~~~v~~~~~~-----~~~D~li~~Ag~~~--~~~~~~~~~~~~----~~~~~~~~~~l~~~  183 (267)
                                       .+.++++++++.     +++|+||||||...  ..+..+..++.|    +.|..+...+...+
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~  163 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence                             222223333332     79999999999743  233333333333    34444444444444


Q ss_pred             HHc--CCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhc----CCCcEEEEecccccccc
Q 024488          184 ARH--GVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN----SDMAVMILRLVVFFTLV  254 (267)
Q Consensus       184 ~~~--~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e----~g~~~~~vrp~~v~~~~  254 (267)
                      ...  ..+.++.+++.+...          ...+....|+.+|++++.+++.++.+    +|+++++|.||+|.|..
T Consensus       164 ~~~~~~~g~~~~~~~~~~~~----------~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~  230 (297)
T d1d7oa_         164 LPIMNPGGASISLTYIASER----------IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRA  230 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTS----------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCC
T ss_pred             HHHhhcCCcceeeeehhhcc----------cccccccceecccccccccccccchhccccceEEecccccccccchh
Confidence            332  234566666544431          13345678999999999999988776    57999999999888754

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.81  E-value=4.6e-19  Score=147.18  Aligned_cols=163  Identities=13%  Similarity=0.075  Sum_probs=106.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc------
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE------  143 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~------  143 (267)
                      ||+||||||++|||+++|++|+++|++|++++|+...                    ...|+.+.+..+....+      
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~--------------------~~~d~~~~~~~~~~~~~~~~~~~   60 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE--------------------VIADLSTAEGRKQAIADVLAKCS   60 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS--------------------EECCTTSHHHHHHHHHHHHTTCT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH--------------------HHHHhcCHHHHHHHHHHHHHHhC
Confidence            7999999999999999999999999999999964211                    24577777665554332      


Q ss_pred             CCCCEEEEccccCCcCCCccChHHHHHHhHHHH----HHHHHHHHHcCCCEEEEEeccccccCC-CCCCC----------
Q 024488          144 NAFDAVMHFAAVAYVGESTLDPLKYYHNITSNT----LVVLESMARHGVDTLIYSSTCATYGEP-EKMPI----------  208 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~iV~vSS~~~~g~~-~~~~~----------  208 (267)
                      +.+|++|||||+....   .........|..+.    ....+.+.+.....+.++++....... ...+.          
T Consensus        61 ~~id~lv~~Ag~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  137 (257)
T d1fjha_          61 KGMDGLVLCAGLGPQT---KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA  137 (257)
T ss_dssp             TCCSEEEECCCCCTTC---SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred             CCCcEEEEcCCCCCcH---HHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEE
Confidence            4699999999975432   23334444454443    335555666666666666664332100 00000          


Q ss_pred             ------CCCCCCCCCChHHHHHHHHHHHHHHhhhc---CCCcEEEEeccccccccc
Q 024488          209 ------TEETPQAPINPYGKAKKMAEDIILDFSKN---SDMAVMILRLVVFFTLVA  255 (267)
Q Consensus       209 ------~e~~~~~~~~~Y~~sK~a~e~l~~~~a~e---~g~~~~~vrp~~v~~~~~  255 (267)
                            ......++..+|+.||++++.|+++++.|   +|+++++|.||+|.|...
T Consensus       138 ~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~  193 (257)
T d1fjha_         138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLL  193 (257)
T ss_dssp             HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------
T ss_pred             EEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhH
Confidence                  00001112346999999999999999988   789999999999987543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.80  E-value=3.3e-19  Score=143.94  Aligned_cols=150  Identities=14%  Similarity=0.138  Sum_probs=112.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      |+||||||||+||++++++|+++|+  +|++..|+....             ...   +..+..|..++...+. ..+|.
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-------------~~~---~~~~~~d~~~~~~~~~-~~~d~   65 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-------------HPR---LDNPVGPLAELLPQLD-GSIDT   65 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-------------CTT---EECCBSCHHHHGGGCC-SCCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-------------ccc---ccccccchhhhhhccc-cchhe
Confidence            8999999999999999999999998  566555422110             112   3445556555544433 36899


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAE  228 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e  228 (267)
                      +||++|.....  ....+.....+..++.+++..+++.+.+++|++||..+++             .+.+.|..+|..+|
T Consensus        66 vi~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~-------------~~~~~y~~~K~~~E  130 (212)
T d2a35a1          66 AFCCLGTTIKE--AGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA-------------KSSIFYNRVKGELE  130 (212)
T ss_dssp             EEECCCCCHHH--HSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT-------------TCSSHHHHHHHHHH
T ss_pred             eeeeeeeeccc--cccccccccchhhhhhhccccccccccccccccccccccc-------------ccccchhHHHHHHh
Confidence            99999864321  2344667788899999999999999999999999988763             23578999999999


Q ss_pred             HHHHHhhhcCCC-cEEEEeccccccccceeecCCCC
Q 024488          229 DIILDFSKNSDM-AVMILRLVVFFTLVAFVIKINPT  263 (267)
Q Consensus       229 ~l~~~~a~e~g~-~~~~vrp~~v~~~~~~~~Gp~~~  263 (267)
                      ..++.    .+. +++++||+       .+|||+..
T Consensus       131 ~~l~~----~~~~~~~I~Rp~-------~v~G~~~~  155 (212)
T d2a35a1         131 QALQE----QGWPQLTIARPS-------LLFGPREE  155 (212)
T ss_dssp             HHHTT----SCCSEEEEEECC-------SEESTTSC
T ss_pred             hhccc----cccccceeeCCc-------ceeCCccc
Confidence            87764    455 58999999       78887654

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.80  E-value=3.4e-19  Score=145.29  Aligned_cols=167  Identities=16%  Similarity=0.121  Sum_probs=119.2

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEE--EEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVT--IVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~--~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (267)
                      +|++||||||||+||++++++|+++|++|.  .+.|++.   .    ...+   ..+++++.+|+++.+++.++++  ++
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~---~----~~~~---~~~~~~~~~d~~~~~~~~~~~~--~~   69 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQ---G----KEKI---GGEADVFIGDITDADSINPAFQ--GI   69 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHH---H----HHHT---TCCTTEEECCTTSHHHHHHHHT--TC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHH---H----HHhc---cCCcEEEEeeeccccccccccc--cc
Confidence            479999999999999999999999997644  4444321   1    1111   3467889999999999999998  89


Q ss_pred             CEEEEccccCCcCC-------------CccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCC
Q 024488          147 DAVMHFAAVAYVGE-------------STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETP  213 (267)
Q Consensus       147 D~li~~Ag~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~  213 (267)
                      |.|||+|+......             ...........+..++++++........+...+.|+...+.....      ..
T Consensus        70 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~------~~  143 (252)
T d2q46a1          70 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP------LN  143 (252)
T ss_dssp             SEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG------GG
T ss_pred             eeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcc------cc
Confidence            99999998643221             112334456677888999999998888889999988666532110      11


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhcCCCcEEEEeccccccccceeecCCCCC
Q 024488          214 QAPINPYGKAKKMAEDIILDFSKNSDMAVMILRLVVFFTLVAFVIKINPTD  264 (267)
Q Consensus       214 ~~~~~~Y~~sK~a~e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~~~~  264 (267)
                      ......|...+.+.+.+    ..+.+++++++||+       ++|||....
T Consensus       144 ~~~~~~~~~~~~~~~~~----~~~~~~~~~ilRp~-------~v~g~~~~~  183 (252)
T d2q46a1         144 KLGNGNILVWKRKAEQY----LADSGTPYTIIRAG-------GLLDKEGGV  183 (252)
T ss_dssp             GGGGCCHHHHHHHHHHH----HHHSSSCEEEEEEC-------EEECSCTTS
T ss_pred             cccccchhhhhhhhhhh----hhcccccceeecce-------EEECCCcch
Confidence            12234566555555444    44489999999999       888887543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.73  E-value=3.4e-17  Score=138.36  Aligned_cols=156  Identities=17%  Similarity=0.129  Sum_probs=112.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcch-hhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGA-VKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      ++||||||||+||++++++|+++|++|+++.|+....... .+.+....  ...++++.+|++|.+++.++++  +.+.+
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~--~~~v~~v~~d~~d~~~~~~~~~--~~~~~   79 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDALK--QVDVV   79 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHHT--TCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc--cCCcEEEEeecccchhhhhhcc--Ccchh
Confidence            6799999999999999999999999999999865432211 11222221  2468899999999999999988  78999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (267)
                      +++++.....           .+..++..++..+.+.+..++|+.||.+.+..      .+..+..+...|..+|...+.
T Consensus        80 ~~~~~~~~~~-----------~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~------~~~~~~~~~~~~~~~~~~~~~  142 (312)
T d1qyda_          80 ISALAGGVLS-----------HHILEQLKLVEAIKEAGNIKRFLPSEFGMDPD------IMEHALQPGSITFIDKRKVRR  142 (312)
T ss_dssp             EECCCCSSSS-----------TTTTTHHHHHHHHHHSCCCSEEECSCCSSCTT------SCCCCCSSTTHHHHHHHHHHH
T ss_pred             hhhhhhcccc-----------cchhhhhHHHHHHHHhcCCcEEEEeeccccCC------CcccccchhhhhhHHHHHHHH
Confidence            9998754221           22334556777788887778888888665532      223345556677777777776


Q ss_pred             HHHHhhhcCCCcEEEEeccccc
Q 024488          230 IILDFSKNSDMAVMILRLVVFF  251 (267)
Q Consensus       230 l~~~~a~e~g~~~~~vrp~~v~  251 (267)
                      +.+.    .+++++++||+.++
T Consensus       143 ~~~~----~~~~~~i~r~~~~~  160 (312)
T d1qyda_         143 AIEA----ASIPYTYVSSNMFA  160 (312)
T ss_dssp             HHHH----TTCCBCEEECCEEH
T ss_pred             hhcc----cccceEEeccceee
Confidence            5544    78999999999443

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.70  E-value=5.5e-17  Score=136.16  Aligned_cols=155  Identities=13%  Similarity=0.167  Sum_probs=108.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhh--hhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVK--VLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      .|+||||||||+||++++++|+++|++|++++|.........+  .+....  ...++++.+|+.+.+...+.++  +.|
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~--~~~   78 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVK--NVD   78 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHH--TCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc--cCCcEEEEeecccchhhhhhhh--hce
Confidence            4889999999999999999999999999999986554433221  122221  2467889999999999999988  789


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHH
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMA  227 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~  227 (267)
                      .+||+++...               ..++..+++++.+.+..++++.||......       +.....+...|...+...
T Consensus        79 ~vi~~~~~~~---------------~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~-------~~~~~~~~~~~~~~~~~~  136 (307)
T d1qyca_          79 VVISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFPSEFGNDVD-------NVHAVEPAKSVFEVKAKV  136 (307)
T ss_dssp             EEEECCCGGG---------------SGGGHHHHHHHHHHCCCSEEECSCCSSCTT-------SCCCCTTHHHHHHHHHHH
T ss_pred             eeeecccccc---------------cchhhHHHHHHHHhccccceeeeccccccc-------cccccccccccccccccc
Confidence            9999987432               123345667777888888888888554421       112222233444455555


Q ss_pred             HHHHHHhhhcCCCcEEEEeccccccccceeecCC
Q 024488          228 EDIILDFSKNSDMAVMILRLVVFFTLVAFVIKIN  261 (267)
Q Consensus       228 e~l~~~~a~e~g~~~~~vrp~~v~~~~~~~~Gp~  261 (267)
                      +.+.    ++.+++++++||+       ++||++
T Consensus       137 ~~~~----~~~~~~~~i~r~~-------~v~g~~  159 (307)
T d1qyca_         137 RRAI----EAEGIPYTYVSSN-------CFAGYF  159 (307)
T ss_dssp             HHHH----HHHTCCBEEEECC-------EEHHHH
T ss_pred             cchh----hccCCCceecccc-------eecCCC
Confidence            4444    4478999999999       666653

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.65  E-value=8.1e-19  Score=139.66  Aligned_cols=82  Identities=16%  Similarity=0.194  Sum_probs=66.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      .+ |+|+||||+||||++++++|+++|++|++++|+..+.++..+.+.+.    ..+....+|++|.+++++++.  ++|
T Consensus        22 ~g-K~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~--~iD   94 (191)
T d1luaa1          22 KG-KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR----FKVNVTAAETADDASRAEAVK--GAH   94 (191)
T ss_dssp             TT-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH----HTCCCEEEECCSHHHHHHHTT--TCS
T ss_pred             CC-CEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc----cchhhhhhhcccHHHHHHHhc--CcC
Confidence            44 99999999999999999999999999999997554433333333322    245668899999999999997  899


Q ss_pred             EEEEccccC
Q 024488          148 AVMHFAAVA  156 (267)
Q Consensus       148 ~li~~Ag~~  156 (267)
                      +||||||+.
T Consensus        95 ilin~Ag~g  103 (191)
T d1luaa1          95 FVFTAGAIG  103 (191)
T ss_dssp             EEEECCCTT
T ss_pred             eeeecCccc
Confidence            999999974

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.59  E-value=2.9e-14  Score=122.88  Aligned_cols=151  Identities=12%  Similarity=0.052  Sum_probs=109.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHH-HHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK-AVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~v~~~~~~~~~D~l  149 (267)
                      |+|+||||||+||++++++|+++||+|+++.|+..+..  .+.+..    ..+++++.+|+.|.. .++.++.  ++|.+
T Consensus         4 ktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~--~~~~~~----~~~v~~~~gD~~d~~~~~~~a~~--~~~~~   75 (350)
T d1xgka_           4 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA----IPNVTLFQGPLLNNVPLMDTLFE--GAHLA   75 (350)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT----STTEEEEESCCTTCHHHHHHHHT--TCSEE
T ss_pred             CEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhh--hhhhcc----cCCCEEEEeeCCCcHHHHHHHhc--CCceE
Confidence            89999999999999999999999999999998654321  111111    246899999999854 4666776  77888


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAED  229 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~a~e~  229 (267)
                      +++.....            ..+...+.++++++.+.+..++|+.||......         ....+...|..+|...+.
T Consensus        76 ~~~~~~~~------------~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~---------~~~~~~~~~~~~k~~~~~  134 (350)
T d1xgka_          76 FINTTSQA------------GDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSL---------YGPWPAVPMWAPKFTVEN  134 (350)
T ss_dssp             EECCCSTT------------SCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGG---------TSSCCCCTTTHHHHHHHH
T ss_pred             Eeeccccc------------chhhhhhhHHHHHHHHhCCCceEEEeecccccc---------CCcccchhhhhhHHHHHH
Confidence            87653211            123455677899999888888888888654421         122334567788988877


Q ss_pred             HHHHhhhcCCCcEEEEecccccccc
Q 024488          230 IILDFSKNSDMAVMILRLVVFFTLV  254 (267)
Q Consensus       230 l~~~~a~e~g~~~~~vrp~~v~~~~  254 (267)
                      +..+    .+++++++||+.++..+
T Consensus       135 ~~~~----~~~~~~~vr~~~~~~~~  155 (350)
T d1xgka_         135 YVRQ----LGLPSTFVYAGIYNNNF  155 (350)
T ss_dssp             HHHT----SSSCEEEEEECEEGGGC
T ss_pred             HHHh----hccCceeeeeceeeccc
Confidence            6555    67899999999777643

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.30  E-value=1.3e-06  Score=64.73  Aligned_cols=115  Identities=15%  Similarity=0.165  Sum_probs=70.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      .++|.|.|+ |.+|..+|..|+.+|  .+|+++|+.+...+.....+...............|   +++    ++  +.|
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d---~~~----~~--~ad   74 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGE---YSD----CK--DAD   74 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECC---GGG----GT--TCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeecc---HHH----hc--ccc
Confidence            478888995 999999999999987  589999964322111111122211112233444444   322    23  789


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEec
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS  196 (267)
                      ++|..||....  ......+....|....+.+.+.+.+.+.+-+|.+-|
T Consensus        75 ivvitag~~~~--~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          75 LVVITAGAPQK--PGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             EEEECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEEecccccC--CCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            99999987532  233456677888888999999999987666665555

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.27  E-value=5.5e-06  Score=61.21  Aligned_cols=117  Identities=12%  Similarity=0.104  Sum_probs=74.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCC--Ccchhhhhhhc-CCCCCceEEEEccCCCHHHHHHHhhcCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRG--NIGAVKVLQEL-FPEPGRLQFIYADLGDAKAVNKFFSENA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~--~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (267)
                      ++|.|.||+|.+|..++..|+.+|  .+++++++...-  .+.....+... ............--.|.+    .++  +
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~----~l~--~   74 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLR----IID--E   74 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGG----GGT--T
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHH----Hhc--c
Confidence            468899999999999999999998  499999863211  11111122221 111222332211111222    223  7


Q ss_pred             CCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEe
Q 024488          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSS  195 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vS  195 (267)
                      .|++|-.||...  ....+..+.++.|....+.+.+.+.+...+.|+.+|
T Consensus        75 aDvVVitAG~~~--~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivVt  122 (145)
T d1hyea1          75 SDVVIITSGVPR--KEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVIT  122 (145)
T ss_dssp             CSEEEECCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECS
T ss_pred             ceEEEEeccccc--CCCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEEc
Confidence            899999999743  233456788899999999999999888766665553

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.25  E-value=8.2e-06  Score=59.15  Aligned_cols=72  Identities=17%  Similarity=0.140  Sum_probs=53.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+|+|.|+ |.+|+.+++.|.+.|++|++++.+   .+...+..++.     ...++.+|.+|++.++++-- ...|.++
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d---~~~~~~~~~~~-----~~~vi~Gd~~~~~~l~~~~i-~~a~~vv   70 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDID---KDICKKASAEI-----DALVINGDCTKIKTLEDAGI-EDADMYI   70 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHC-----SSEEEESCTTSHHHHHHTTT-TTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCC---hhhhhhhhhhh-----hhhhccCcccchhhhhhcCh-hhhhhhc
Confidence            57899996 999999999999999999999953   33332222221     46788999999998887732 2678887


Q ss_pred             Ec
Q 024488          151 HF  152 (267)
Q Consensus       151 ~~  152 (267)
                      -.
T Consensus        71 ~~   72 (132)
T d1lssa_          71 AV   72 (132)
T ss_dssp             EC
T ss_pred             cc
Confidence            64

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.25  E-value=1.1e-05  Score=59.41  Aligned_cols=114  Identities=18%  Similarity=0.194  Sum_probs=74.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|.|+||+|.+|+++|..|+.+|.  +++++|...   .+. + ..++. +.........-+ ...+..+.++  +.|++
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~---~~~-~-a~Dl~-~~~~~~~~~~~~-~~~~~~~~~~--~aDiv   72 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH---TPG-V-AADLS-HIETRATVKGYL-GPEQLPDCLK--GCDVV   72 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS---HHH-H-HHHHT-TSSSSCEEEEEE-SGGGHHHHHT--TCSEE
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccc---cch-h-hHHHh-hhhhhcCCCeEE-cCCChHHHhC--CCCEE
Confidence            688999999999999999999885  788888532   111 1 11221 111111111111 2233334444  78999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEec
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS  196 (267)
                      |..||...  ...++..+.+..|....+.+++.+.+.+..-+|.+-|
T Consensus        73 Vitag~~~--~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          73 VIPAGVPR--KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             EECCSCCC--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EECCCcCC--CCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            99999743  2244667789999999999999999987655555444

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.19  E-value=3.7e-07  Score=70.40  Aligned_cols=44  Identities=20%  Similarity=0.252  Sum_probs=34.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhh
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVL  114 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~  114 (267)
                      |||.|+||+|+||+++|+.|++.||+|++++|++.+.+.+.+.+
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i   44 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            35778888999999999999999999999997544333343333

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.11  E-value=5.2e-05  Score=55.75  Aligned_cols=115  Identities=18%  Similarity=0.194  Sum_probs=72.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHh-C--CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLK-D--SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~-~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      ++|.|+|++|.+|.+++..|+. .  +.++++.|..+ ..+.....+... ........ ..+-.+.+++    +  +.|
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~-~~~~~~~~-~~~~~~~~~~----~--~aD   71 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI-PTAVKIKG-FSGEDATPAL----E--GAD   71 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTS-CSSCEEEE-ECSSCCHHHH----T--TCS
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCC-ccccCCcE-EEcCCCcccc----C--CCC
Confidence            4788999999999999988754 3  46899988532 111111112221 11112222 2233344433    3  679


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCE-EEEEec
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDT-LIYSST  196 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-iV~vSS  196 (267)
                      ++|..||...  ....+..+.+..|....+.+.+.+.+..... ||.+|.
T Consensus        72 vvvitaG~~~--k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtN  119 (145)
T d2cmda1          72 VVLISAGVRR--KPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN  119 (145)
T ss_dssp             EEEECCSCCC--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             EEEECCCccC--CCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccC
Confidence            9999999753  2344667788899999999999999887544 445554

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.09  E-value=2.4e-05  Score=57.45  Aligned_cols=114  Identities=15%  Similarity=0.200  Sum_probs=70.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      ++|.|.|+ |.+|..++..|+.++.  +++++|+.....+.....+...............   +++    .++  +.|+
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~----~~~--~adi   71 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYS----DVK--DCDV   71 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG----GGT--TCSE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHH----HhC--CCce
Confidence            56778896 9999999999999875  8999997554333333333332222223332222   222    223  7899


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEec
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS  196 (267)
                      +|..||....  ......+.+..|....+.+.+.+.+.+..-++.+-|
T Consensus        72 vvitag~~~~--~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          72 IVVTAGANRK--PGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             EEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EEEecccccC--cCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence            9999997532  235567788899999999999999887544444434

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.06  E-value=4.3e-06  Score=64.19  Aligned_cols=106  Identities=17%  Similarity=0.199  Sum_probs=68.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +.+|||+||+|++|...++-....|++|+.+.+++    +..+.+++.   +....+..-|-...+.+.+.....++|++
T Consensus        30 G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~----~~~~~~~~~---Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v  102 (182)
T d1v3va2          30 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSD----EKIAYLKQI---GFDAAFNYKTVNSLEEALKKASPDGYDCY  102 (182)
T ss_dssp             SCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH----HHHHHHHHT---TCSEEEETTSCSCHHHHHHHHCTTCEEEE
T ss_pred             CCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCH----HHHHHHHhh---hhhhhcccccccHHHHHHHHhhcCCCcee
Confidence            38999999999999999999999999999998532    223334443   22333333444445555555555689999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccccC
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGE  202 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~g~  202 (267)
                      +++.|..           .       ....++.++  ..++++.++....++.
T Consensus       103 ~D~vG~~-----------~-------~~~~~~~l~--~~G~~v~~G~~~~~~~  135 (182)
T d1v3va2         103 FDNVGGE-----------F-------LNTVLSQMK--DFGKIAICGAISVYNR  135 (182)
T ss_dssp             EESSCHH-----------H-------HHHHGGGEE--EEEEEEECCCGGGTTC
T ss_pred             EEecCch-----------h-------hhhhhhhcc--CCCeEEeecceeeccc
Confidence            9998721           1       112222222  2468888887766643

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.04  E-value=1.2e-05  Score=60.74  Aligned_cols=73  Identities=21%  Similarity=0.214  Sum_probs=53.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+|+|.|| |.+|+.+|+.|+++|++|++++|+.   +.+.+..++    .........+..+.......+.  ..|.++
T Consensus         3 K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~---~~a~~l~~~----~~~~~~~~~~~~~~~~~~~~i~--~~~~~i   72 (182)
T d1e5qa1           3 KSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTL---ESAKKLSAG----VQHSTPISLDVNDDAALDAEVA--KHDLVI   72 (182)
T ss_dssp             CEEEEECC-STTHHHHHHHHHTTTCEEEEEESCH---HHHHHHHTT----CTTEEEEECCTTCHHHHHHHHT--TSSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCh---HHHHHHHhc----ccccccccccccchhhhHhhhh--ccceeE
Confidence            89999986 9999999999999999999999643   333332222    2345555667777777777776  567777


Q ss_pred             Ecc
Q 024488          151 HFA  153 (267)
Q Consensus       151 ~~A  153 (267)
                      ...
T Consensus        73 ~~~   75 (182)
T d1e5qa1          73 SLI   75 (182)
T ss_dssp             ECS
T ss_pred             eec
Confidence            654

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.03  E-value=1.9e-05  Score=58.89  Aligned_cols=118  Identities=15%  Similarity=0.078  Sum_probs=72.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCCcchhhhhhhcCC-CCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +||.|.|+ |.+|..++..|+..+ .+++++|.++...+.....+..... .+...... .+ .+.   +..++  +.|+
T Consensus         8 ~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~-~~-~~~---~~~~~--~adi   79 (154)
T d1pzga1           8 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVR-AE-YSY---EAALT--GADC   79 (154)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEE-EE-CSH---HHHHT--TCSE
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEe-cc-Cch---hhhhc--CCCe
Confidence            78888896 999999998888877 4899988544322222222222110 01111111 11 122   23333  7799


Q ss_pred             EEEccccCCcCC---CccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEec
Q 024488          149 VMHFAAVAYVGE---STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (267)
Q Consensus       149 li~~Ag~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS  196 (267)
                      +|..||....+.   ...+-.+.+..|....+.+++.+.+.+..-+|.+-|
T Consensus        80 Vvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          80 VIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             EEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            999999764321   112456778888888999999999887655555444

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.03  E-value=1.9e-05  Score=58.41  Aligned_cols=115  Identities=17%  Similarity=0.225  Sum_probs=73.9

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCC-CCCceEEEEccCCCHHHHHHHhhcCC
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENA  145 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (267)
                      +.++|.|.|+ |.+|..++..|+.+|.  +++++|+.+...+.....+..... ..........|   .+    .++  +
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d---~~----~l~--d   74 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD---YD----DCR--D   74 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC---GG----GTT--T
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECC---HH----Hhc--c
Confidence            3478999996 9999999999999875  799998643222222222332211 12233333333   22    233  6


Q ss_pred             CCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEEe
Q 024488          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~vS  195 (267)
                      .|++|..||....  ......+.+..|....+.+.+.+.+.+.. .++.+|
T Consensus        75 aDvvvitag~~~~--~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          75 ADLVVICAGANQK--PGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             CSEEEECCSCCCC--TTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             ceeEEEecccccc--cCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence            8999999997532  23455677888888899999999888654 444444

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.97  E-value=3.4e-05  Score=56.56  Aligned_cols=112  Identities=15%  Similarity=0.131  Sum_probs=73.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchh---hhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAV---KVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (267)
                      ||.|+||+|.+|..+|..|+.++.  +++++|.... .+.+.   ..+...............|   +++    ++  +.
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~-~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~~----~~--~a   71 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDK-EDDTVGQAADTNHGIAYDSNTRVRQGG---YED----TA--GS   71 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGG-HHHHHHHHHHHHHHHTTTCCCEEEECC---GGG----GT--TC
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCc-ccccceeecchhhcccccCCceEeeCC---HHH----hh--hc
Confidence            688999999999999999999985  7888874211 11111   1222211223334443333   332    22  78


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEe
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSS  195 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vS  195 (267)
                      |++|-.||...  ...++-.+.++.|....+.+.+.+.+.+.+-++.+-
T Consensus        72 DiVvitaG~~~--~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivv  118 (142)
T d1o6za1          72 DVVVITAGIPR--QPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTT  118 (142)
T ss_dssp             SEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEEC
T ss_pred             CEEEEeccccc--ccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence            99999999643  233567788999999999999999988754444433

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.95  E-value=2e-05  Score=60.31  Aligned_cols=82  Identities=12%  Similarity=0.103  Sum_probs=60.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      |+|+|.|+ ||.|++++..|++.|. +++++.|+..+.+++....+++.. .........|+.+.+++.....  ..|+|
T Consensus        19 k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~dii   94 (182)
T d1vi2a1          19 KTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE-NTDCVVTVTDLADQQAFAEALA--SADIL   94 (182)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHH-HSSCEEEEEETTCHHHHHHHHH--TCSEE
T ss_pred             CEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHh-hcCcceEeeecccccchhhhhc--cccee
Confidence            89999995 8999999999999997 788888766555554444333321 1234455788999988888777  78999


Q ss_pred             EEccccC
Q 024488          150 MHFAAVA  156 (267)
Q Consensus       150 i~~Ag~~  156 (267)
                      ||+....
T Consensus        95 IN~Tp~G  101 (182)
T d1vi2a1          95 TNGTKVG  101 (182)
T ss_dssp             EECSSTT
T ss_pred             ccccCCc
Confidence            9997654

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.89  E-value=3.5e-05  Score=56.54  Aligned_cols=115  Identities=15%  Similarity=0.143  Sum_probs=71.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcC-CCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      ++|.|+|| |.+|..++..|+..|  .+++++|..+...+.....+.... .......+...  .|.++    ++  +.|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~----~~--dad   71 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD----TA--NSD   71 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG----GT--TCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH----hc--CCe
Confidence            35777795 999999999999987  589999964432222111111110 01123333322  23322    33  789


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEec
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS  196 (267)
                      ++|..||...  ....+..+.+..|....+.+.+.+.+....-++.+-|
T Consensus        72 vvvitag~~~--~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1guza1          72 IVIITAGLPR--KPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (142)
T ss_dssp             EEEECCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEEEEEecCC--CCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEEec
Confidence            9999999743  2334567778888888999999998877554554443

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=1.3e-05  Score=60.93  Aligned_cols=74  Identities=16%  Similarity=0.245  Sum_probs=50.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHH---HHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAV---NKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v---~~~~~~~~~D  147 (267)
                      .+|||+||+|++|...++.+...|++|+++++++    +..+.++++   +.. ++  .|..+.+..   .+.....++|
T Consensus        30 ~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~----~~~~~~~~~---Ga~-~v--i~~~~~~~~~~i~~~t~~~g~d   99 (174)
T d1yb5a2          30 ESVLVHGASGGVGLAACQIARAYGLKILGTAGTE----EGQKIVLQN---GAH-EV--FNHREVNYIDKIKKYVGEKGID   99 (174)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH----HHHHHHHHT---TCS-EE--EETTSTTHHHHHHHHHCTTCEE
T ss_pred             CEEEEEeccccccccccccccccCcccccccccc----ccccccccc---Ccc-cc--cccccccHHHHhhhhhccCCce
Confidence            7999999999999999999999999999998532    223334444   221 22  355554433   3333335799


Q ss_pred             EEEEccc
Q 024488          148 AVMHFAA  154 (267)
Q Consensus       148 ~li~~Ag  154 (267)
                      +++.+.|
T Consensus       100 ~v~d~~g  106 (174)
T d1yb5a2         100 IIIEMLA  106 (174)
T ss_dssp             EEEESCH
T ss_pred             EEeeccc
Confidence            9999876

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.87  E-value=4.6e-05  Score=55.74  Aligned_cols=114  Identities=18%  Similarity=0.171  Sum_probs=71.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      ++|.|.|+ |.+|..++..|+.++  .+++++|..+...+.....+...............   +.++    ++  +.|+
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~---~~~~----~~--~adi   70 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG---DYAD----LK--GSDV   70 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEEC---CGGG----GT--TCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCC---cHHH----hc--CCCE
Confidence            35667796 999999999988887  48999985432221111111221111223333333   2322    33  7899


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEec
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS  196 (267)
                      +|..||....  ......+.+..|....+.+.+.+.+....-+|.+-|
T Consensus        71 vvitag~~~~--~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          71 VIVAAGVPQK--PGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             EEECCCCCCC--SSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEecccccC--CCcchhhhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence            9999997532  234556778888888999999999887655555544

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.86  E-value=0.00013  Score=55.24  Aligned_cols=115  Identities=13%  Similarity=0.105  Sum_probs=70.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-------eEEEEecCCCCCcc-hhhhhhhcCCC-CCceEEEEccCCCHHHHHHHh
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNIG-AVKVLQELFPE-PGRLQFIYADLGDAKAVNKFF  141 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-------~V~~~~r~~~~~~~-~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~  141 (267)
                      -+|.||||+|.||.+++..|+....       .+.+++.  ..... +.....++... .....-+..- ++.   .+.+
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di--~~~~~~l~g~~mdl~d~a~~~~~~~~~~-~~~---~~~~   98 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGS--ERSFQALEGVAMELEDSLYPLLREVSIG-IDP---YEVF   98 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECC--GGGHHHHHHHHHHHHTTTCTTEEEEEEE-SCH---HHHT
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecC--ccccchhcchhhhhcccccccccCcccc-ccc---hhhc
Confidence            5899999999999999999987532       4555553  22212 12111121111 1122222111 121   2344


Q ss_pred             hcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC--CEEEEEe
Q 024488          142 SENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV--DTLIYSS  195 (267)
Q Consensus       142 ~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~iV~vS  195 (267)
                      +  +.|++|-.||..  .......++.+..|....+.+.+.+.+...  .+|+.+|
T Consensus        99 ~--~aDvVvi~ag~~--rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          99 E--DVDWALLIGAKP--RGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             T--TCSEEEECCCCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             c--CCceEEEeeccC--CCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            4  789999999874  344567788899999999999999988643  3454554

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.84  E-value=7.3e-05  Score=54.79  Aligned_cols=115  Identities=14%  Similarity=0.084  Sum_probs=72.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      .||.|.|+ |.+|.++|..|+.+|.  +++++|..+...+.....++..............  .+.++    ++  +.|+
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~~----~~--daDv   72 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEI----CR--DADM   72 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGG----GT--TCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHHH----hh--CCcE
Confidence            46778896 9999999999999885  8999885432211111112221111122222222  12222    22  6799


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEec
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS  196 (267)
                      +|..||...  ....+..+.+..|....+.+.+.+.+.+...++.+-|
T Consensus        73 VVitaG~~~--~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          73 VVITAGPRQ--KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             EEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EEEeccccc--CCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            999999753  2345567788899999999999999887655554444

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.82  E-value=1.6e-05  Score=60.59  Aligned_cols=77  Identities=21%  Similarity=0.185  Sum_probs=47.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +.+|||+||+||+|...++-+...|++|+.+.+++.+.    +.++++   +... .+.-+- +.++..+.....++|++
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~----~~~~~l---Ga~~-vi~~~~-~~~~~~~~~~~~gvD~v  102 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEH----DYLRVL---GAKE-VLARED-VMAERIRPLDKQRWAAA  102 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCH----HHHHHT---TCSE-EEECC----------CCSCCEEEE
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHH----HHHHhc---ccce-eeecch-hHHHHHHHhhccCcCEE
Confidence            38999999999999998888888999999998654332    233333   2222 222111 11222233334689999


Q ss_pred             EEcccc
Q 024488          150 MHFAAV  155 (267)
Q Consensus       150 i~~Ag~  155 (267)
                      |++.|-
T Consensus       103 id~vgg  108 (176)
T d1xa0a2         103 VDPVGG  108 (176)
T ss_dssp             EECSTT
T ss_pred             EEcCCc
Confidence            999873

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.80  E-value=0.00014  Score=53.86  Aligned_cols=117  Identities=15%  Similarity=0.078  Sum_probs=70.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-------eEEEEecCCCCCcchhhhhhhcCC-CCCceEEEEccCCCHHHHHHHhh
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFS  142 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~  142 (267)
                      .+|.|+||+|.+|++++..|+..+.       ...+++. ....+.+.....++.. .......+...-.+.    +.++
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~   79 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEI-PQAMKALEGVVMELEDCAFPLLAGLEATDDPK----VAFK   79 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECC-GGGHHHHHHHHHHHHTTTCTTEEEEEEESCHH----HHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhcc-ccchhhHcCchhhhhccccccccccccCCchh----hhcc
Confidence            6899999999999999999988653       1222221 1222222221111111 112233333332233    3333


Q ss_pred             cCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcC-C-CEEEEEec
Q 024488          143 ENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-V-DTLIYSST  196 (267)
Q Consensus       143 ~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~-~~iV~vSS  196 (267)
                        +.|++|-.||...  ....+..+.+..|....+.+.+.+.+.. . ..|+.+|-
T Consensus        80 --~advViitaG~~~--~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvsN  131 (154)
T d1y7ta1          80 --DADYALLVGAAPR--KAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGN  131 (154)
T ss_dssp             --TCSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             --cccEEEeecCcCC--CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecC
Confidence              7899999999753  3345677888899999999999998864 2 34545553

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.76  E-value=0.00017  Score=51.79  Aligned_cols=71  Identities=15%  Similarity=0.141  Sum_probs=51.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHH-hhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKF-FSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~-~~~~~~D~l  149 (267)
                      |+++|.| .|-+|+++++.|.+.|++|++++.   +.+...+    +..  .....+.+|.++++.++++ ++  +.|.+
T Consensus         1 k~~iIiG-~G~~G~~la~~L~~~g~~vvvid~---d~~~~~~----~~~--~~~~~~~gd~~~~~~l~~a~i~--~a~~v   68 (134)
T d2hmva1           1 KQFAVIG-LGRFGGSIVKELHRMGHEVLAVDI---NEEKVNA----YAS--YATHAVIANATEENELLSLGIR--NFEYV   68 (134)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCCEEEES---CHHHHHH----TTT--TCSEEEECCTTCTTHHHHHTGG--GCSEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCeEEEecC---cHHHHHH----HHH--hCCcceeeecccchhhhccCCc--cccEE
Confidence            5678887 489999999999999999999994   3322222    212  2345678999999988876 44  57887


Q ss_pred             EEcc
Q 024488          150 MHFA  153 (267)
Q Consensus       150 i~~A  153 (267)
                      |-..
T Consensus        69 i~~~   72 (134)
T d2hmva1          69 IVAI   72 (134)
T ss_dssp             EECC
T ss_pred             EEEc
Confidence            7554

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.76  E-value=0.00019  Score=53.42  Aligned_cols=114  Identities=18%  Similarity=0.164  Sum_probs=72.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCC-CCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      ++|.|.|+ |.+|..++..|+.+|.  +++++|+.....+.....+..... .+... .+..  .|++++    +  +.|
T Consensus        21 ~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~-~~~~--~d~~~~----~--~ad   90 (160)
T d1i0za1          21 NKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPK-IVAD--KDYSVT----A--NSK   90 (160)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSE-EEEC--SSGGGG----T--TCS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCe-EEec--cchhhc----c--ccc
Confidence            68888895 9999999999999985  899998543222111111222111 11122 2222  233322    2  789


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEEec
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~vSS  196 (267)
                      +||..||....  ...+..+.+..|....+.+.+.+.+.+.+ .+|.+|-
T Consensus        91 iVVitAg~~~~--~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          91 IVVVTAGVRQQ--EGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             EEEECCSCCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EEEEecCCccc--cCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            99999997532  23455678888999999999999988754 4555553

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.75  E-value=1.7e-05  Score=60.29  Aligned_cols=75  Identities=9%  Similarity=0.031  Sum_probs=51.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHH---HHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK---AVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~v~~~~~~~~~D  147 (267)
                      ++|+|+||+|++|...++-+...|++|+++++++.+    .+.++++   +.. +.  .|-.+++   .+.++-...++|
T Consensus        30 ~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k----~~~~~~l---Ga~-~v--i~~~~~d~~~~v~~~t~g~g~d   99 (179)
T d1qora2          30 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQK----AQSALKA---GAW-QV--INYREEDLVERLKEITGGKKVR   99 (179)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHH----HHHHHHH---TCS-EE--EETTTSCHHHHHHHHTTTCCEE
T ss_pred             CEEEEEccccccchHHHHHHHHhCCeEeecccchHH----HHHHHhc---CCe-EE--EECCCCCHHHHHHHHhCCCCeE
Confidence            899999999999999999888899999999864332    2334444   212 22  3444433   344443335789


Q ss_pred             EEEEcccc
Q 024488          148 AVMHFAAV  155 (267)
Q Consensus       148 ~li~~Ag~  155 (267)
                      ++++++|.
T Consensus       100 ~v~d~~g~  107 (179)
T d1qora2         100 VVYDSVGR  107 (179)
T ss_dssp             EEEECSCG
T ss_pred             EEEeCccH
Confidence            99998873

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.73  E-value=1.9e-05  Score=60.26  Aligned_cols=74  Identities=16%  Similarity=0.113  Sum_probs=50.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH---HHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA---KAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~~~D  147 (267)
                      .+|||+||+|++|...++-+...|++|+++.++.   + ..+.+++.   +.. +.+  |-.+.   +.+.+.....++|
T Consensus        27 ~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~---~-~~~~l~~~---Ga~-~vi--~~~~~~~~~~v~~~t~~~g~d   96 (183)
T d1pqwa_          27 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD---A-KREMLSRL---GVE-YVG--DSRSVDFADEILELTDGYGVD   96 (183)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSH---H-HHHHHHTT---CCS-EEE--ETTCSTHHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCCcccccchhhccccccceeeeccc---c-cccccccc---ccc-ccc--cCCccCHHHHHHHHhCCCCEE
Confidence            7999999999999999998888899999988532   2 22344443   222 222  33343   3344443335799


Q ss_pred             EEEEccc
Q 024488          148 AVMHFAA  154 (267)
Q Consensus       148 ~li~~Ag  154 (267)
                      +++.+.|
T Consensus        97 ~v~d~~g  103 (183)
T d1pqwa_          97 VVLNSLA  103 (183)
T ss_dssp             EEEECCC
T ss_pred             EEEeccc
Confidence            9999887

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.66  E-value=6.3e-05  Score=56.16  Aligned_cols=114  Identities=16%  Similarity=0.126  Sum_probs=70.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcCCC-CCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELFPE-PGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      .+|.|.|+ |.+|..+|..|+.+|.  +++++|+.....+.....+...... +........   |.+++    +  +.|
T Consensus        20 ~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~---d~~~~----~--~ad   89 (159)
T d2ldxa1          20 CKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGK---DYNVS----A--NSK   89 (159)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEES---SGGGG----T--TEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEecc---chhhh----c--ccc
Confidence            57888895 9999999999999975  8999985432221111222222111 222222222   33222    2  679


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEEec
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~vSS  196 (267)
                      ++|..||....+  ..+..+.++.|....+.+.+.+.+.+.. .++.+|-
T Consensus        90 ivvitag~~~~~--~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          90 LVIITAGARMVS--GQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             EEEECCSCCCCT--TTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             EEEEecccccCC--CCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeCC
Confidence            999999975432  2344566788888888899988887654 4444553

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.64  E-value=4.9e-05  Score=57.47  Aligned_cols=72  Identities=18%  Similarity=0.142  Sum_probs=48.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      ++|+|+||+|++|...++.+...|++|+++++++.+.    +.++++   +... .  .|..+.  .++.-...++|++|
T Consensus        29 ~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~----~~~~~l---Ga~~-~--i~~~~~--~~~~~~~~g~D~v~   96 (171)
T d1iz0a2          29 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKL----ALPLAL---GAEE-A--ATYAEV--PERAKAWGGLDLVL   96 (171)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGS----HHHHHT---TCSE-E--EEGGGH--HHHHHHTTSEEEEE
T ss_pred             CEEEEEeccccchhhhhhhhccccccccccccccccc----cccccc---ccce-e--eehhhh--hhhhhccccccccc
Confidence            8999999999999999998889999999998643322    233333   2221 1  233322  23333335799999


Q ss_pred             Eccc
Q 024488          151 HFAA  154 (267)
Q Consensus       151 ~~Ag  154 (267)
                      ++.|
T Consensus        97 d~~G  100 (171)
T d1iz0a2          97 EVRG  100 (171)
T ss_dssp             ECSC
T ss_pred             cccc
Confidence            9776

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.62  E-value=9.7e-05  Score=54.31  Aligned_cols=116  Identities=14%  Similarity=0.117  Sum_probs=70.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCCcchhhhhhhcCC-CCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      |+|.|.| +|.+|..++..|+.+|  .+++++|......+.....+.+... ..........   |.+++    +  +.|
T Consensus         2 kKI~IIG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~---d~~~l----~--~ad   71 (146)
T d1hyha1           2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---DWAAL----A--DAD   71 (146)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---CGGGG----T--TCS
T ss_pred             CeEEEEC-cCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceecc---CHHHh----c--ccc
Confidence            7888999 5999999999999887  4899988543221111112222111 1223333333   33322    2  789


Q ss_pred             EEEEccccCCcCC--CccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEec
Q 024488          148 AVMHFAAVAYVGE--STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (267)
Q Consensus       148 ~li~~Ag~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS  196 (267)
                      ++|-.||......  ...+-.+.+..|....+.+.+.+.+.+..-++.+-|
T Consensus        72 iVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          72 VVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             EEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence            9999999754221  112234567778888889999998887655555444

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.60  E-value=0.00011  Score=54.57  Aligned_cols=115  Identities=16%  Similarity=0.127  Sum_probs=67.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-------eEEEEecCCCCCcchhhhh-hhcC-CCCCceEEEEccCCCHHHHHHHh
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNIGAVKVL-QELF-PEPGRLQFIYADLGDAKAVNKFF  141 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-------~V~~~~r~~~~~~~~~~~~-~~~~-~~~~~~~~~~~Dl~d~~~v~~~~  141 (267)
                      .+|.|+||+|.+|++++..|+..+.       .+++.+.  ...+...+.+ .++. ........+..--.+    .+.+
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~   77 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDI--TPMMGVLDGVLMELQDCALPLLKDVIATDKE----EIAF   77 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECC--GGGHHHHHHHHHHHHHTCCTTEEEEEEESCH----HHHT
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecC--ccchhhhhhhhhhhcccccccccccccCccc----cccc
Confidence            6899999999999999999987542       3555442  2222222211 1111 111122222221112    2333


Q ss_pred             hcCCCCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCC-C-EEEEEe
Q 024488          142 SENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGV-D-TLIYSS  195 (267)
Q Consensus       142 ~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~-~iV~vS  195 (267)
                      +  +.|++|-.||....  ..++.++.++.|....+.+.+.+.+... . .++.+|
T Consensus        78 ~--~~dvVVitag~~~~--~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          78 K--DLDVAILVGSMPRR--DGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             T--TCSEEEECCSCCCC--TTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             C--CceEEEEecccCCC--CCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence            3  78999999997543  3344556788899889999999887643 2 344444

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.59  E-value=2.9e-05  Score=50.56  Aligned_cols=34  Identities=35%  Similarity=0.467  Sum_probs=30.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      ++|+|+||+|++|...++.+...|++|+++.+++
T Consensus        33 ~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~   66 (77)
T d1o8ca2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRE   66 (77)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCH
Confidence            7899999999999999998888999999988644

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.57  E-value=0.00085  Score=49.02  Aligned_cols=90  Identities=17%  Similarity=0.154  Sum_probs=53.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC----CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS----YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENA  145 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (267)
                      ||+|.|.||||.+|+.+.+.|+++.    .+++....+.......    ...   ....  ...++.+.+.+.      +
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~----~~~---~~~~--~~~~~~~~~~~~------~   65 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAP----SFG---GTTG--TLQDAFDLEALK------A   65 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCC----GGG---TCCC--BCEETTCHHHHH------T
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccc----ccc---CCce--eeecccchhhhh------c
Confidence            6899999999999999999887753    3666665332211111    100   1111  223444554433      7


Q ss_pred             CCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEE
Q 024488          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLI  192 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV  192 (267)
                      +|++|.+++.                  .....+.+.+.+.+.+.+|
T Consensus        66 ~DivF~a~~~------------------~~s~~~~~~~~~~g~~~~V   94 (146)
T d1t4ba1          66 LDIIVTCQGG------------------DYTNEIYPKLRESGWQGYW   94 (146)
T ss_dssp             CSEEEECSCH------------------HHHHHHHHHHHHTTCCCEE
T ss_pred             CcEEEEecCc------------------hHHHHhhHHHHhcCCCeec
Confidence            8999998752                  2345567777777654333

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.56  E-value=0.00012  Score=53.59  Aligned_cols=115  Identities=14%  Similarity=0.133  Sum_probs=66.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCCcchhhhhhhcCC-CCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      ++|.|.|+ |.+|..+|..|+.++ .+++++|..+...+.....+..... .+........  .|.+++    +  +.|+
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~~~----~--~adv   72 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYADT----A--NSDV   72 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGGG----T--TCSE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHHHh----c--CCCE
Confidence            67888895 999999999998887 4899988543221111111111100 0112222211  123222    2  6799


Q ss_pred             EEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEec
Q 024488          149 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (267)
Q Consensus       149 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS  196 (267)
                      +|-.||....  ...+..+.+..|....+.+.+.+.+.+..-++.+-|
T Consensus        73 vvitag~~~~--~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          73 IVVTSGAPRK--PGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             EEECCSCC-----------CHHHHHHHHHHHHHHHGGGCTTCEEEECS
T ss_pred             EEEeeeccCC--cCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeC
Confidence            9999997532  233445667788888899999999877655555544

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.54  E-value=0.00019  Score=52.38  Aligned_cols=115  Identities=15%  Similarity=0.161  Sum_probs=70.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCCcchhhhhhhcC-CCCCceEEEEccCCCHHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D  147 (267)
                      ++|.|.|+ |.+|.++|..|+.+|.  +++++|..+...+.....+.... ..+........  .|.+    .++  +.|
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~----~~~--~ad   71 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS----LLK--GSE   71 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG----GGT--TCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCHH----Hhc--ccc
Confidence            35667785 9999999999998873  79998854322211111122111 11122222222  1222    222  679


Q ss_pred             EEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEec
Q 024488          148 AVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (267)
Q Consensus       148 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS  196 (267)
                      ++|-.||...  ....+..+.+..|....+.+.+.+.+.+...++.+-|
T Consensus        72 iVvitag~~~--~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          72 IIVVTAGLAR--KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             EEEECCCCCC--CSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEEEeccccC--CCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            9999998643  2334567788889999999999999887555555554

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.51  E-value=8.1e-05  Score=55.59  Aligned_cols=71  Identities=21%  Similarity=0.228  Sum_probs=49.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      +++|+|.|+ |.+|+.+++.|.+.|+ +++++.|+   .+++.+..+++   +  ...     .+.+++.+.+.  ..|+
T Consensus        24 ~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt---~~ka~~l~~~~---~--~~~-----~~~~~~~~~l~--~~Di   87 (159)
T d1gpja2          24 DKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRT---YERAVELARDL---G--GEA-----VRFDELVDHLA--RSDV   87 (159)
T ss_dssp             TCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSS---HHHHHHHHHHH---T--CEE-----CCGGGHHHHHH--TCSE
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCc---HHHHHHHHHhh---h--ccc-----ccchhHHHHhc--cCCE
Confidence            389999997 9999999999999998 58777753   33444444443   1  222     23455666666  7899


Q ss_pred             EEEccccC
Q 024488          149 VMHFAAVA  156 (267)
Q Consensus       149 li~~Ag~~  156 (267)
                      ||++.+..
T Consensus        88 vi~atss~   95 (159)
T d1gpja2          88 VVSATAAP   95 (159)
T ss_dssp             EEECCSSS
T ss_pred             EEEecCCC
Confidence            99997743

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.47  E-value=0.0004  Score=51.01  Aligned_cols=37  Identities=24%  Similarity=0.483  Sum_probs=33.6

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      ..|++|.|.||.|.+|+.+++.|.+.||+|.+.++..
T Consensus         7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~   43 (152)
T d2pv7a2           7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDRED   43 (152)
T ss_dssp             TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred             CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccc
Confidence            4468999999999999999999999999999999743

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.47  E-value=0.00032  Score=55.23  Aligned_cols=75  Identities=20%  Similarity=0.212  Sum_probs=51.8

Q ss_pred             CcEEEEEcC----------------CChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC
Q 024488           70 VTHVLVTGG----------------AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD  133 (267)
Q Consensus        70 ~k~vlVTGa----------------sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d  133 (267)
                      +++||||+|                ||-.|.+||+++..+|++|+++.-... .           ..+..+..+..  .+
T Consensus         6 g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~-~-----------~~p~~~~~~~~--~t   71 (223)
T d1u7za_           6 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-L-----------PTPPFVKRVDV--MT   71 (223)
T ss_dssp             TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-C-----------CCCTTEEEEEC--CS
T ss_pred             CCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccc-c-----------Cccccccccee--hh
Confidence            388888875                799999999999999999999873211 0           11234544443  45


Q ss_pred             HHHHHHHhhc--CCCCEEEEccccCCc
Q 024488          134 AKAVNKFFSE--NAFDAVMHFAAVAYV  158 (267)
Q Consensus       134 ~~~v~~~~~~--~~~D~li~~Ag~~~~  158 (267)
                      .+++...+..  ...|++|++|++...
T Consensus        72 ~~~m~~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          72 ALEMEAAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             HHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             hHHHHHHHHhhhccceeEeeeechhhh
Confidence            5555444432  378999999998654

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.44  E-value=0.0003  Score=51.83  Aligned_cols=117  Identities=11%  Similarity=0.085  Sum_probs=71.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCCcchhhhhhhcCC-CCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      .||.|.|+ |.+|..++..|+..+ .+++++|+.+...+.....+..... .+........|  +.++    ++  +.|+
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~~----~~--~adv   74 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYDD----LA--GADV   74 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGGG----GT--TCSE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cccc----cC--CCcE
Confidence            57888895 999999998888777 4888888643322222112222110 11223333222  2222    22  6899


Q ss_pred             EEEccccCCcC-C--CccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEec
Q 024488          149 VMHFAAVAYVG-E--STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (267)
Q Consensus       149 li~~Ag~~~~~-~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS  196 (267)
                      +|..||....+ .  ...+..+.+..|....+.+.+.+.+....-+|.+-|
T Consensus        75 vvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          75 VIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             EEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            99999975332 1  122456678888888999999999887655555444

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.43  E-value=0.00017  Score=55.22  Aligned_cols=103  Identities=15%  Similarity=0.082  Sum_probs=54.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHH-HHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAK-AVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~v~~~~~~~~~D~l  149 (267)
                      ++|||+||+|++|...++-+...|+++++...  .+.++..+..+++   +.. ..+...-.+.. .++++. ..++|++
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~--~~~e~~~~l~~~~---gad-~vi~~~~~~~~~~~~~~~-~~GvDvv  104 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGIC--GTQEKCLFLTSEL---GFD-AAVNYKTGNVAEQLREAC-PGGVDVY  104 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEE--SSHHHHHHHHHHS---CCS-EEEETTSSCHHHHHHHHC-TTCEEEE
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceeccc--chHHHHhhhhhcc---cce-EEeeccchhHHHHHHHHh-ccCceEE
Confidence            78999999999999988888888987555432  2222333333333   112 22222222332 333333 3579999


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEeccccc
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATY  200 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~~  200 (267)
                      +.+.|-.           .+       ...++.+  ...+++|.+++.+.|
T Consensus       105 ~D~vGg~-----------~~-------~~~~~~l--~~~G~iv~~G~~s~~  135 (187)
T d1vj1a2         105 FDNVGGD-----------IS-------NTVISQM--NENSHIILCGQISQY  135 (187)
T ss_dssp             EESSCHH-----------HH-------HHHHTTE--EEEEEEEEC------
T ss_pred             EecCCch-----------hH-------HHHhhhc--cccccEEEecccccc
Confidence            9998721           11       1122222  234799988876665

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.42  E-value=0.0002  Score=53.64  Aligned_cols=76  Identities=18%  Similarity=0.191  Sum_probs=50.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEcc--CCCHHHHHHHhhc---CC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYAD--LGDAKAVNKFFSE---NA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D--l~d~~~v~~~~~~---~~  145 (267)
                      .+|+|+| +|+||...+..+...|++|+++++++.+    .+..+++   +.... +..|  -.+.+++.+.+..   .+
T Consensus        28 ~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r----~~~a~~~---ga~~~-~~~~~~~~~~~~~~~~~~~~~g~g   98 (170)
T d1e3ja2          28 TTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRR----LEVAKNC---GADVT-LVVDPAKEEESSIIERIRSAIGDL   98 (170)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH----HHHHHHT---TCSEE-EECCTTTSCHHHHHHHHHHHSSSC
T ss_pred             CEEEEEc-ccccchhhHhhHhhhcccccccchHHHH----HHHHHHc---CCcEE-EeccccccccchhhhhhhcccccC
Confidence            7899997 7999999999999999999999854322    2333333   22222 2222  2344555444443   57


Q ss_pred             CCEEEEcccc
Q 024488          146 FDAVMHFAAV  155 (267)
Q Consensus       146 ~D~li~~Ag~  155 (267)
                      +|++|.++|.
T Consensus        99 ~D~vid~~g~  108 (170)
T d1e3ja2          99 PNVTIDCSGN  108 (170)
T ss_dssp             CSEEEECSCC
T ss_pred             CceeeecCCC
Confidence            9999999874

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.38  E-value=0.00042  Score=48.25  Aligned_cols=69  Identities=19%  Similarity=0.263  Sum_probs=53.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      ..+|.|.| +|.+|+-++.+..+.|++|++++.++...  +.+.         .-.++.+|..|.+.+.++....++|+|
T Consensus        11 ~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~P--A~~v---------a~~~i~~~~~d~~~l~~~~~~~~~Dvi   78 (111)
T d1kjqa2          11 ATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAP--AMHV---------AHRSHVINMLDGDALRRVVELEKPHYI   78 (111)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCG--GGGG---------SSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCc--hhhc---------CCeEEECCCCCHHHHHHHHHhhCCceE
Confidence            47899999 79999999999999999999999644322  1111         235678999999999998865467988


Q ss_pred             E
Q 024488          150 M  150 (267)
Q Consensus       150 i  150 (267)
                      .
T Consensus        79 T   79 (111)
T d1kjqa2          79 V   79 (111)
T ss_dssp             E
T ss_pred             E
Confidence            5

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.36  E-value=0.00011  Score=55.44  Aligned_cols=74  Identities=20%  Similarity=0.284  Sum_probs=47.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|+|+|.| +||.+++++..|.+.|.+|+++.|+..+.+++.+.+.+.    ..+..+  +..+.       .....|+|
T Consensus        18 ~k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~----~~~~~~--~~~~~-------~~~~~dli   83 (170)
T d1nyta1          18 GLRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT----GSIQAL--SMDEL-------EGHEFDLI   83 (170)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG----SSEEEC--CSGGG-------TTCCCSEE
T ss_pred             CCEEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhc----cccccc--ccccc-------ccccccee
Confidence            38999999 599999999999999999999886543333332222221    123332  22211       11368999


Q ss_pred             EEccccCC
Q 024488          150 MHFAAVAY  157 (267)
Q Consensus       150 i~~Ag~~~  157 (267)
                      ||+.....
T Consensus        84 IN~Tp~G~   91 (170)
T d1nyta1          84 INATSSGI   91 (170)
T ss_dssp             EECCSCGG
T ss_pred             ecccccCc
Confidence            99976543

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.33  E-value=2.6e-05  Score=58.92  Aligned_cols=35  Identities=34%  Similarity=0.381  Sum_probs=30.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~  105 (267)
                      .+|||+||+||+|...++-....|++|+.+.++..
T Consensus        25 ~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~   59 (167)
T d1tt7a2          25 GSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNRE   59 (167)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSS
T ss_pred             CEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHH
Confidence            67999999999999998877788999999986543

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.32  E-value=0.00036  Score=51.72  Aligned_cols=35  Identities=20%  Similarity=0.134  Sum_probs=30.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG  106 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~  106 (267)
                      |+|.|.|+ |.||..++..|++.|++|.+++|....
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            57888886 999999999999999999999986543

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.27  E-value=9.2e-05  Score=56.79  Aligned_cols=79  Identities=13%  Similarity=0.092  Sum_probs=49.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEc---cCCCH-HHHHHHhhc--CC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA---DLGDA-KAVNKFFSE--NA  145 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---Dl~d~-~~v~~~~~~--~~  145 (267)
                      +++++||+|++|...++-....|++|+++.++....++..+.++++.   ... .+.-   |..+. +.+.++.+.  .+
T Consensus        32 vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lG---ad~-vi~~~~~~~~~~~~~v~~~~~~~g~~  107 (189)
T d1gu7a2          32 WFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELG---ATQ-VITEDQNNSREFGPTIKEWIKQSGGE  107 (189)
T ss_dssp             EEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHT---CSE-EEEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred             EEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcc---ccE-EEeccccchhHHHHHHHHHHhhccCC
Confidence            44457999999999988888889999999876555555555555552   222 2221   22221 223333322  46


Q ss_pred             CCEEEEccc
Q 024488          146 FDAVMHFAA  154 (267)
Q Consensus       146 ~D~li~~Ag  154 (267)
                      +|+++++.|
T Consensus       108 vdvv~D~vg  116 (189)
T d1gu7a2         108 AKLALNCVG  116 (189)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            999999876

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.24  E-value=0.00037  Score=52.84  Aligned_cols=76  Identities=11%  Similarity=0.126  Sum_probs=47.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHH----HHHhhcCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAV----NKFFSENA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v----~~~~~~~~  145 (267)
                      .+|+|+|+ |+||...+..+...|+ +|+++++++.    ..+..+++   +.. ..+...=.+..+.    .+.....+
T Consensus        30 ~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~----~~~~a~~l---Ga~-~vi~~~~~~~~~~~~~i~~~~~~~g  100 (182)
T d1vj0a2          30 KTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPN----RLKLAEEI---GAD-LTLNRRETSVEERRKAIMDITHGRG  100 (182)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHH----HHHHHHHT---TCS-EEEETTTSCHHHHHHHHHHHTTTSC
T ss_pred             CEEEEECC-Cccchhheecccccccccccccccccc----cccccccc---cce-EEEeccccchHHHHHHHHHhhCCCC
Confidence            89999986 9999999999999998 7999885332    22333444   211 2232222233332    22222246


Q ss_pred             CCEEEEcccc
Q 024488          146 FDAVMHFAAV  155 (267)
Q Consensus       146 ~D~li~~Ag~  155 (267)
                      +|++|.++|.
T Consensus       101 ~Dvvid~vG~  110 (182)
T d1vj0a2         101 ADFILEATGD  110 (182)
T ss_dssp             EEEEEECSSC
T ss_pred             ceEEeecCCc
Confidence            9999999874

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.22  E-value=0.00027  Score=53.21  Aligned_cols=74  Identities=20%  Similarity=0.287  Sum_probs=48.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|+|+|.| +||.+++++..|.+.+.+|+++.|+..+   +.+..+.... ...+..+..|-.+         ....|++
T Consensus        18 ~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~---a~~l~~~~~~-~~~~~~~~~~~~~---------~~~~dii   83 (171)
T d1p77a1          18 NQHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSK---TKELAERFQP-YGNIQAVSMDSIP---------LQTYDLV   83 (171)
T ss_dssp             TCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHH---HHHHHHHHGG-GSCEEEEEGGGCC---------CSCCSEE
T ss_pred             CCEEEEEC-CcHHHHHHHHHHcccCceeeeccchHHH---HHHHHHHHhh-ccccchhhhcccc---------cccccee
Confidence            38999998 6999999999999988999999975433   3333333311 2244444444221         1378999


Q ss_pred             EEccccCC
Q 024488          150 MHFAAVAY  157 (267)
Q Consensus       150 i~~Ag~~~  157 (267)
                      ||+.....
T Consensus        84 IN~tp~g~   91 (171)
T d1p77a1          84 INATSAGL   91 (171)
T ss_dssp             EECCCC--
T ss_pred             eecccccc
Confidence            99976543

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.21  E-value=0.00044  Score=51.71  Aligned_cols=73  Identities=15%  Similarity=0.112  Sum_probs=50.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +.+|+|.|+ |+||...++.+...|+++++++++..+    .+..+++.   .. +  ..|..+.+......+  ++|++
T Consensus        31 G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~----~~~a~~lG---ad-~--~i~~~~~~~~~~~~~--~~D~v   97 (168)
T d1uufa2          31 GKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAK----REAAKALG---AD-E--VVNSRNADEMAAHLK--SFDFI   97 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGG----HHHHHHHT---CS-E--EEETTCHHHHHTTTT--CEEEE
T ss_pred             CCEEEEecc-chHHHHHHHHhhcccccchhhccchhH----HHHHhccC---Cc-E--EEECchhhHHHHhcC--CCcee
Confidence            389999985 999999998888899999998853322    23334442   11 1  246666665554443  79999


Q ss_pred             EEcccc
Q 024488          150 MHFAAV  155 (267)
Q Consensus       150 i~~Ag~  155 (267)
                      |.++|.
T Consensus        98 id~~g~  103 (168)
T d1uufa2          98 LNTVAA  103 (168)
T ss_dssp             EECCSS
T ss_pred             eeeeec
Confidence            999874

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=0.00074  Score=50.53  Aligned_cols=76  Identities=14%  Similarity=0.156  Sum_probs=50.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---CCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAF  146 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~~~  146 (267)
                      .+|+|.|+ |++|...+..+...|+ +|+++++++.    ..+..+++   +.. ..+..+-.+..+..+.++.   .++
T Consensus        28 d~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~----rl~~a~~~---Ga~-~~~~~~~~~~~~~~~~~~~~~g~g~   98 (171)
T d1pl8a2          28 HKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSAT----RLSKAKEI---GAD-LVLQISKESPQEIARKVEGQLGCKP   98 (171)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHH----HHHHHHHT---TCS-EEEECSSCCHHHHHHHHHHHHTSCC
T ss_pred             CEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHH----HHHHHHHh---CCc-ccccccccccccccccccccCCCCc
Confidence            78999985 9999999999999998 7888885332    22233343   222 2333444555555555443   578


Q ss_pred             CEEEEcccc
Q 024488          147 DAVMHFAAV  155 (267)
Q Consensus       147 D~li~~Ag~  155 (267)
                      |++|.++|.
T Consensus        99 Dvvid~~G~  107 (171)
T d1pl8a2          99 EVTIECTGA  107 (171)
T ss_dssp             SEEEECSCC
T ss_pred             eEEEeccCC
Confidence            999999874

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.13  E-value=0.00068  Score=50.62  Aligned_cols=77  Identities=22%  Similarity=0.243  Sum_probs=48.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH-HHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~D~  148 (267)
                      .+|+|.|++|++|...+..+...|+ +|++++++.    +..+.++++   +.. +.+..+-.|. +.+.+.....++|+
T Consensus        29 ~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~----~~~~~~~~~---Ga~-~~i~~~~~~~~~~~~~~~~~~~~d~  100 (170)
T d1jvba2          29 KTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVRE----EAVEAAKRA---GAD-YVINASMQDPLAEIRRITESKGVDA  100 (170)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSH----HHHHHHHHH---TCS-EEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred             CEEEEEeccccceeeeeecccccccccccccccch----hhHHHHHHc---CCc-eeeccCCcCHHHHHHHHhhcccchh
Confidence            7999999999999999998888885 888877432    223333443   212 2333322222 23333333356999


Q ss_pred             EEEcccc
Q 024488          149 VMHFAAV  155 (267)
Q Consensus       149 li~~Ag~  155 (267)
                      +|.++|.
T Consensus       101 vid~~g~  107 (170)
T d1jvba2         101 VIDLNNS  107 (170)
T ss_dssp             EEESCCC
T ss_pred             hhccccc
Confidence            9999874

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.09  E-value=0.0012  Score=49.63  Aligned_cols=76  Identities=13%  Similarity=0.139  Sum_probs=45.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCH-HHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDA-KAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~D~l  149 (267)
                      .+|+|.|+ |+||...+..+...|++++++..   ..++..+..+++.    -.+++..+-.|. +.++++. .+++|++
T Consensus        30 ~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~---~~~~k~~~a~~~G----a~~~i~~~~~~~~~~i~~~t-~gg~D~v  100 (174)
T d1f8fa2          30 SSFVTWGA-GAVGLSALLAAKVCGASIIIAVD---IVESRLELAKQLG----ATHVINSKTQDPVAAIKEIT-DGGVNFA  100 (174)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHHTCSEEEEEE---SCHHHHHHHHHHT----CSEEEETTTSCHHHHHHHHT-TSCEEEE
T ss_pred             CEEEEeCC-CHHHhhhhhcccccccceeeeec---cHHHHHHHHHHcC----CeEEEeCCCcCHHHHHHHHc-CCCCcEE
Confidence            78999986 99999999888888986655441   1223334444442    123333222222 2233332 3579999


Q ss_pred             EEcccc
Q 024488          150 MHFAAV  155 (267)
Q Consensus       150 i~~Ag~  155 (267)
                      |.+.|.
T Consensus       101 id~~G~  106 (174)
T d1f8fa2         101 LESTGS  106 (174)
T ss_dssp             EECSCC
T ss_pred             EEcCCc
Confidence            999874

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.08  E-value=0.0015  Score=47.82  Aligned_cols=76  Identities=20%  Similarity=0.277  Sum_probs=55.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      .+++|.|. |-+|+.++++|.+.|++|++++.   +.+...+..++..  ...+.++.+|.+|++.++++-- .+.|.+|
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~---d~~~~~~~~~~~~--~~~~~vi~Gd~~d~~~L~~a~i-~~a~~vi   76 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQNVTVISN---LPEDDIKQLEQRL--GDNADVIPGDSNDSSVLKKAGI-DRCRAIL   76 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEEC---CCHHHHHHHHHHH--CTTCEEEESCTTSHHHHHHHTT-TTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEec---cchhHHHHHHHhh--cCCcEEEEccCcchHHHHHhcc-ccCCEEE
Confidence            36888885 89999999999999999999984   3333223333322  2368889999999998876543 2578887


Q ss_pred             Ecc
Q 024488          151 HFA  153 (267)
Q Consensus       151 ~~A  153 (267)
                      -+.
T Consensus        77 ~~~   79 (153)
T d1id1a_          77 ALS   79 (153)
T ss_dssp             ECS
T ss_pred             Ecc
Confidence            654

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.07  E-value=0.00034  Score=52.83  Aligned_cols=74  Identities=16%  Similarity=0.138  Sum_probs=47.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC---HHHHHHHhhcCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD---AKAVNKFFSENAF  146 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d---~~~v~~~~~~~~~  146 (267)
                      .+|+|.|+ |+||...+..+...|+ +|+++++++    +..+..+++   +. .+++  |..+   .+.+.++....++
T Consensus        29 ~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~----~r~~~a~~l---Ga-~~~i--~~~~~~~~~~v~~~t~g~G~   97 (174)
T d1jqba2          29 SSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRP----ICVEAAKFY---GA-TDIL--NYKNGHIEDQVMKLTNGKGV   97 (174)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCH----HHHHHHHHH---TC-SEEE--CGGGSCHHHHHHHHTTTSCE
T ss_pred             CEEEEEcC-Ccchhhhhhhhhcccccccccccchh----hhHHHHHhh---Cc-cccc--cccchhHHHHHHHHhhccCc
Confidence            78999975 9999999988888897 688887432    223333444   21 1222  3333   3344444443569


Q ss_pred             CEEEEcccc
Q 024488          147 DAVMHFAAV  155 (267)
Q Consensus       147 D~li~~Ag~  155 (267)
                      |++|.++|.
T Consensus        98 D~vid~~g~  106 (174)
T d1jqba2          98 DRVIMAGGG  106 (174)
T ss_dssp             EEEEECSSC
T ss_pred             ceEEEccCC
Confidence            999999984

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.04  E-value=0.0006  Score=50.95  Aligned_cols=73  Identities=21%  Similarity=0.250  Sum_probs=46.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCC-CHHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG-DAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~v~~~~~~~~~D~l  149 (267)
                      .+|+|.|+ |++|...++.+...|++|+++++++.+.    +..+++   +.. +++  |-. +.+..+...  ..+|.+
T Consensus        29 ~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~----~~a~~l---Ga~-~~i--~~~~~~~~~~~~~--~~~d~v   95 (168)
T d1piwa2          29 KKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKR----EDAMKM---GAD-HYI--ATLEEGDWGEKYF--DTFDLI   95 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTH----HHHHHH---TCS-EEE--EGGGTSCHHHHSC--SCEEEE
T ss_pred             CEEEEECC-CCcchhHHHHhhhccccccccccchhHH----HHhhcc---CCc-EEe--eccchHHHHHhhh--cccceE
Confidence            78999986 9999998887778899999999654332    233444   212 222  211 222223322  378999


Q ss_pred             EEccccC
Q 024488          150 MHFAAVA  156 (267)
Q Consensus       150 i~~Ag~~  156 (267)
                      +.+.+..
T Consensus        96 i~~~~~~  102 (168)
T d1piwa2          96 VVCASSL  102 (168)
T ss_dssp             EECCSCS
T ss_pred             EEEecCC
Confidence            9987653

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.97  E-value=0.003  Score=47.22  Aligned_cols=78  Identities=15%  Similarity=0.041  Sum_probs=48.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC-HHHHHHHhhcCCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFD  147 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~D  147 (267)
                      +.+|+|.|+ ||+|...+..+...|+ +|+++++++.    ..+..++.   +....+...|-.+ .+.+.+....+++|
T Consensus        29 GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~----k~~~a~~~---Ga~~~i~~~~~~~~~~~~~~~~~~~G~D  100 (176)
T d2jhfa2          29 GSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKD----KFAKAKEV---GATECVNPQDYKKPIQEVLTEMSNGGVD  100 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGG----GHHHHHHT---TCSEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred             CCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHH----HHHHHHHh---CCeeEEecCCchhHHHHHHHHHhcCCCC
Confidence            389999998 7899999999999985 7777774332    22333333   2122111223222 33444444446899


Q ss_pred             EEEEcccc
Q 024488          148 AVMHFAAV  155 (267)
Q Consensus       148 ~li~~Ag~  155 (267)
                      ++|.+.|.
T Consensus       101 ~vid~~G~  108 (176)
T d2jhfa2         101 FSFEVIGR  108 (176)
T ss_dssp             EEEECSCC
T ss_pred             EEEecCCc
Confidence            99999874

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.93  E-value=0.00092  Score=50.05  Aligned_cols=76  Identities=14%  Similarity=0.031  Sum_probs=45.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCCcchhhhhhhcCCCCCceEEEEc-c-CCCHHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA-D-LGDAKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-D-l~d~~~v~~~~~~~~~D  147 (267)
                      .+|+|.|+ ||+|...+..+...|+. |++++++    ++..+..+++..    -+.+.. | -.+...+.+....+++|
T Consensus        30 ~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~----~~k~~~ak~lGa----~~~i~~~~~~~~~~~~~~~~~~~g~D  100 (176)
T d2fzwa2          30 SVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDIN----KDKFARAKEFGA----TECINPQDFSKPIQEVLIEMTDGGVD  100 (176)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSC----GGGHHHHHHHTC----SEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred             CEEEEecc-hhHHHHHHHHHHHHhcCceEEEccc----HHHHHHHHHhCC----cEEEeCCchhhHHHHHHHHHcCCCCc
Confidence            79999987 68999999988889975 5544432    223344444421    122221 1 12233333333346899


Q ss_pred             EEEEcccc
Q 024488          148 AVMHFAAV  155 (267)
Q Consensus       148 ~li~~Ag~  155 (267)
                      ++|.+.|.
T Consensus       101 ~vid~~G~  108 (176)
T d2fzwa2         101 YSFECIGN  108 (176)
T ss_dssp             EEEECSCC
T ss_pred             EeeecCCC
Confidence            99999874

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.88  E-value=0.0022  Score=48.15  Aligned_cols=77  Identities=12%  Similarity=0.024  Sum_probs=49.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC-HHHHHHHhhcCCCCE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD-AKAVNKFFSENAFDA  148 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~D~  148 (267)
                      .+|+|+|+ |++|...+..+...|+ +|++++.++.+    .+..+++   +....+-.-|-.+ .+.+.+.....++|+
T Consensus        31 ~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~k----l~~Ak~~---GA~~~in~~~~~~~~~~~~~~~~g~G~d~  102 (176)
T d1d1ta2          31 STCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDK----FEKAMAV---GATECISPKDSTKPISEVLSEMTGNNVGY  102 (176)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGG----HHHHHHH---TCSEEECGGGCSSCHHHHHHHHHTSCCCE
T ss_pred             CEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHH----HHHHHhc---CCcEEECccccchHHHHHHHHhccccceE
Confidence            78999985 9999999999999995 79998854322    2333444   2222211123222 344444444468999


Q ss_pred             EEEcccc
Q 024488          149 VMHFAAV  155 (267)
Q Consensus       149 li~~Ag~  155 (267)
                      +|.+.|.
T Consensus       103 vi~~~g~  109 (176)
T d1d1ta2         103 TFEVIGH  109 (176)
T ss_dssp             EEECSCC
T ss_pred             EEEeCCc
Confidence            9999874

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.88  E-value=0.00036  Score=52.86  Aligned_cols=34  Identities=35%  Similarity=0.467  Sum_probs=30.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      .+|||+||+||+|...++-....|++|+.+.+++
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~   66 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRE   66 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEEecch
Confidence            5899999999999999888888999999998644

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.74  E-value=0.0028  Score=47.28  Aligned_cols=76  Identities=20%  Similarity=0.174  Sum_probs=45.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      .+|+|.|+ |++|...+..+...|+ +|+++++++    +..+..++.   + ..+++.-+=.+.+.+.+.....++|++
T Consensus        34 ~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~----~k~~~~~~~---g-a~~~i~~~~~~~~~~~~~~~~~g~d~v  104 (172)
T d1h2ba2          34 AYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKE----EKLKLAERL---G-ADHVVDARRDPVKQVMELTRGRGVNVA  104 (172)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSH----HHHHHHHHT---T-CSEEEETTSCHHHHHHHHTTTCCEEEE
T ss_pred             CEEEEeCC-ChHHHHHHHHHHhhcCcccccccchh----HHHHHHhhc---c-cceeecCcccHHHHHHHhhCCCCceEE
Confidence            78999885 9999998888887886 556666422    223333443   2 123333322223334443333579999


Q ss_pred             EEcccc
Q 024488          150 MHFAAV  155 (267)
Q Consensus       150 i~~Ag~  155 (267)
                      |.++|.
T Consensus       105 id~~g~  110 (172)
T d1h2ba2         105 MDFVGS  110 (172)
T ss_dssp             EESSCC
T ss_pred             EEecCc
Confidence            999984

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.70  E-value=0.0061  Score=45.57  Aligned_cols=76  Identities=14%  Similarity=0.121  Sum_probs=47.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCC--CHHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG--DAKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--d~~~v~~~~~~~~~D  147 (267)
                      .+|+|.| +|+||...+..+...|+ +|++++.++.    ..+..+++   +. ...+...-.  ....+.+....+++|
T Consensus        30 ~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~----r~~~a~~~---Ga-~~~i~~~~~~~~~~~~~~~~~~~G~d  100 (174)
T d1e3ia2          30 STCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGE----KFPKAKAL---GA-TDCLNPRELDKPVQDVITELTAGGVD  100 (174)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGG----GHHHHHHT---TC-SEEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred             CEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchH----HHHHHHHh---CC-CcccCCccchhhhhhhHhhhhcCCCc
Confidence            7899997 59999999999999998 5666664322    22333443   11 122221111  233444444457899


Q ss_pred             EEEEcccc
Q 024488          148 AVMHFAAV  155 (267)
Q Consensus       148 ~li~~Ag~  155 (267)
                      ++|.++|.
T Consensus       101 ~vie~~G~  108 (174)
T d1e3ia2         101 YSLDCAGT  108 (174)
T ss_dssp             EEEESSCC
T ss_pred             EEEEeccc
Confidence            99999984

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.67  E-value=0.00051  Score=51.72  Aligned_cols=33  Identities=24%  Similarity=0.029  Sum_probs=30.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      |++.|.|+ |.+|..+|..|+++|++|.+++|++
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~   34 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDA   34 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCH
Confidence            78999995 9999999999999999999999643

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.66  E-value=0.00077  Score=51.35  Aligned_cols=35  Identities=20%  Similarity=0.260  Sum_probs=31.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~  105 (267)
                      .++|.|.|| |-+|+.+|..++..|++|++.+++..
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~   38 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEH   38 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHH
Confidence            478999996 99999999999999999999997543

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.57  E-value=0.0068  Score=40.23  Aligned_cols=71  Identities=15%  Similarity=0.155  Sum_probs=46.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      +|+|+|.|. |.-|.++|+.|.+.|++|++.|.+...  ...+.++      ....+..... +.+.+    .  ++|.+
T Consensus         5 ~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~--~~~~~~~------~~~~~~~~~~-~~~~~----~--~~d~v   68 (93)
T d2jfga1           5 GKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTP--PGLDKLP------EAVERHTGSL-NDEWL----M--AADLI   68 (93)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSC--TTGGGSC------TTSCEEESBC-CHHHH----H--HCSEE
T ss_pred             CCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCc--hhHHHHh------hccceeeccc-chhhh----c--cCCEE
Confidence            389999995 889999999999999999999963321  1122211      1233333333 23322    3  57999


Q ss_pred             EEccccC
Q 024488          150 MHFAAVA  156 (267)
Q Consensus       150 i~~Ag~~  156 (267)
                      |-.-|+.
T Consensus        69 i~SPGi~   75 (93)
T d2jfga1          69 VASPGIA   75 (93)
T ss_dssp             EECTTSC
T ss_pred             EECCCCC
Confidence            9988864

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.50  E-value=0.004  Score=46.82  Aligned_cols=32  Identities=19%  Similarity=0.432  Sum_probs=27.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC-CCeEEEEe
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVD  101 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~-G~~V~~~~  101 (267)
                      |.+|.|.||||+.|.++.+-|.++ ..++..+.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~   33 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALT   33 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence            689999999999999999999997 55666553

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.48  E-value=0.0044  Score=46.02  Aligned_cols=33  Identities=15%  Similarity=0.322  Sum_probs=28.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~  104 (267)
                      |+|+|.| +||.+++++..|.+.|+ +|.++.|+.
T Consensus        18 ~~vlIlG-aGGaarai~~aL~~~g~~~I~I~nR~~   51 (167)
T d1npya1          18 AKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNV   51 (167)
T ss_dssp             SCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCH
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCCEEEEecccH
Confidence            7899998 59999999999999997 788887643

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.46  E-value=0.0037  Score=46.13  Aligned_cols=34  Identities=26%  Similarity=0.491  Sum_probs=30.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      |++|.+.| .|-+|..+|+.|++.||+|.+.+|+.
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~   34 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQ   34 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECch
Confidence            57888887 89999999999999999999999654

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.44  E-value=0.0014  Score=49.44  Aligned_cols=78  Identities=17%  Similarity=0.169  Sum_probs=46.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCC-ceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPG-RLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      |+|.|.| +|-.|.++|..|++.|++|.+++|..  .++..+.+.+...+.. .......++.-.++++++++  ..|+|
T Consensus         1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~--~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~ad~I   75 (180)
T d1txga2           1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEF--DTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLE--NAEVV   75 (180)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGG--GHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHT--TCSEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEecc--cHHHHHHHhhhhhhhhhcchhccccccccccHHHHHh--ccchh
Confidence            4677888 69999999999999999999998632  1222233322211110 11111112223455666776  67998


Q ss_pred             EEcc
Q 024488          150 MHFA  153 (267)
Q Consensus       150 i~~A  153 (267)
                      |...
T Consensus        76 i~av   79 (180)
T d1txga2          76 LLGV   79 (180)
T ss_dssp             EECS
T ss_pred             hccc
Confidence            8754

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.40  E-value=0.011  Score=44.07  Aligned_cols=76  Identities=17%  Similarity=0.041  Sum_probs=47.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCC--HHHHHHHhhcCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGD--AKAVNKFFSENAFD  147 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~D  147 (267)
                      .+|+|.|+ |++|...+..+...|+ +|++++++..    ..+..+++   +. -.++...-.|  .+.+......+++|
T Consensus        29 ~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~----kl~~a~~l---Ga-~~~i~~~~~d~~~~~~~~~~~~~G~d   99 (174)
T d1p0fa2          29 STCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKD----KFPKAIEL---GA-TECLNPKDYDKPIYEVICEKTNGGVD   99 (174)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGG----GHHHHHHT---TC-SEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred             CEEEEECC-CchhHHHHHHHHHcCCceeeccCChHH----HHHHHHHc---CC-cEEEcCCCchhHHHHHHHHhcCCCCc
Confidence            89999985 9999999999999996 6777774332    22333343   21 1222211112  33444444446899


Q ss_pred             EEEEcccc
Q 024488          148 AVMHFAAV  155 (267)
Q Consensus       148 ~li~~Ag~  155 (267)
                      ++|.++|.
T Consensus       100 ~vid~~g~  107 (174)
T d1p0fa2         100 YAVECAGR  107 (174)
T ss_dssp             EEEECSCC
T ss_pred             EEEEcCCC
Confidence            99999874

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.30  E-value=0.038  Score=40.91  Aligned_cols=81  Identities=19%  Similarity=0.060  Sum_probs=51.7

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccC--CCHHHHHHHhhcC
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADL--GDAKAVNKFFSEN  144 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~~~v~~~~~~~  144 (267)
                      ..+ |+|+|.|-|.-+|+-++..|+++|++|+.+....  .....+. ....    -......|+  -..+.+++...  
T Consensus        27 l~G-K~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~--~~~~~~~-~~~~----~~~~~~~~~~~~~~~~lk~~~~--   96 (171)
T d1edza1          27 LYG-KKCIVINRSEIVGRPLAALLANDGATVYSVDVNN--IQKFTRG-ESLK----LNKHHVEDLGEYSEDLLKKCSL--   96 (171)
T ss_dssp             TTT-CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE--EEEEESC-CCSS----CCCCEEEEEEECCHHHHHHHHH--
T ss_pred             CCC-CEEEEECCccccHHHHHHHHHHCCCEEEEecccc--ccccccc-ccee----eeeeccccccccchhHHhhccc--
Confidence            345 9999999999999999999999999999886421  1110000 0000    000111222  34566777776  


Q ss_pred             CCCEEEEccccCC
Q 024488          145 AFDAVMHFAAVAY  157 (267)
Q Consensus       145 ~~D~li~~Ag~~~  157 (267)
                      ..|++|..+|...
T Consensus        97 ~aDIvIsavG~p~  109 (171)
T d1edza1          97 DSDVVITGVPSEN  109 (171)
T ss_dssp             HCSEEEECCCCTT
T ss_pred             cCCEEEEccCCCc
Confidence            5799999888643

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.20  E-value=0.0053  Score=45.25  Aligned_cols=32  Identities=22%  Similarity=0.162  Sum_probs=28.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      .+|+|.|+ |++|...+..+...|++|++++++
T Consensus        29 ~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~   60 (166)
T d1llua2          29 QWVAISGI-GGLGHVAVQYARAMGLHVAAIDID   60 (166)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CEEEEeec-cccHHHHHHHHHHcCCccceecch
Confidence            78999885 999999998888889999999854

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=96.19  E-value=0.033  Score=40.22  Aligned_cols=93  Identities=18%  Similarity=0.170  Sum_probs=52.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC----CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS----YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (267)
                      ++|.|.||||..|+++++.|+++.    .++..+..+ +.....   .    ....... ...+..+.+.+    +  ++
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~-~~~gk~---~----~~~~~~~-~~~~~~~~~~~----~--~~   65 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS-QIGVPA---P----NFGKDAG-MLHDAFDIESL----K--QL   65 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS-CCSSBC---C----CSSSCCC-BCEETTCHHHH----T--TC
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccc-cccccc---c----ccCCcce-eeecccchhhh----c--cc
Confidence            368899999999999999888653    356555422 111111   0    0011111 11233344332    3  78


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEEec
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVD-TLIYSST  196 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~vSS  196 (267)
                      |++|.+..-                  .....+.+.+.+.+.+ .||=.||
T Consensus        66 DvvF~alp~------------------~~s~~~~~~l~~~g~~~~VIDlSs   98 (147)
T d1mb4a1          66 DAVITCQGG------------------SYTEKVYPALRQAGWKGYWIDAAS   98 (147)
T ss_dssp             SEEEECSCH------------------HHHHHHHHHHHHTTCCSEEEESSS
T ss_pred             cEEEEecCc------------------hHHHHHhHHHHHcCCceEEEeCCc
Confidence            999988741                  2345667777777754 3444555

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.18  E-value=0.0015  Score=49.97  Aligned_cols=35  Identities=31%  Similarity=0.400  Sum_probs=31.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG  106 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~  106 (267)
                      |+|.|.|| |-+|+.+|..++..|++|+++++++..
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~   39 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDI   39 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHH
Confidence            78999996 999999999999999999999975543

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=96.11  E-value=0.0009  Score=51.12  Aligned_cols=36  Identities=22%  Similarity=0.203  Sum_probs=31.8

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      +..|++|.|.| +|-.|.++|..|++.|++|.+++|+
T Consensus         4 ~~~m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~   39 (189)
T d1n1ea2           4 LLYLNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMN   39 (189)
T ss_dssp             CCCEEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSC
T ss_pred             cceeceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEec
Confidence            34578899999 6899999999999999999999964

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.09  E-value=0.0021  Score=48.34  Aligned_cols=42  Identities=21%  Similarity=0.328  Sum_probs=32.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhh
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVL  114 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~  114 (267)
                      |+|+|.| +||.+++++..|.+.| +|+++.|+..+.+.+.+.+
T Consensus        19 k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~   60 (177)
T d1nvta1          19 KNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEI   60 (177)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHH
T ss_pred             CEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHH
Confidence            8999998 6899999999998777 8999887554444443333

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.08  E-value=0.024  Score=41.80  Aligned_cols=77  Identities=16%  Similarity=0.137  Sum_probs=47.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEc-cCC-CHHHHHHHhhcCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYA-DLG-DAKAVNKFFSENAF  146 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dl~-d~~~v~~~~~~~~~  146 (267)
                      +.+|+|.|+ |++|...+..+...|. +|+++++++    +..+..+++   + --+++.. +-. ..+.+......+++
T Consensus        29 g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~----~rl~~a~~~---G-Ad~~in~~~~~~~~~~~~~~~~~~G~   99 (175)
T d1cdoa2          29 GSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNP----DKFEKAKVF---G-ATDFVNPNDHSEPISQVLSKMTNGGV   99 (175)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG----GGHHHHHHT---T-CCEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred             CCEEEEEec-CCccchHHHHHHHHhhchheeecchH----HHHHHHHHc---C-CcEEEcCCCcchhHHHHHHhhccCCc
Confidence            378999985 7788888888888876 677776433    223334444   2 1222321 111 23445555555689


Q ss_pred             CEEEEcccc
Q 024488          147 DAVMHFAAV  155 (267)
Q Consensus       147 D~li~~Ag~  155 (267)
                      |++|.+.|.
T Consensus       100 d~vid~~G~  108 (175)
T d1cdoa2         100 DFSLECVGN  108 (175)
T ss_dssp             SEEEECSCC
T ss_pred             ceeeeecCC
Confidence            999999984

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.07  E-value=0.002  Score=49.48  Aligned_cols=30  Identities=30%  Similarity=0.350  Sum_probs=26.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r  102 (267)
                      +|.|.| .|++|..+|..|++.|++|+++|.
T Consensus         2 kI~ViG-lG~vGl~~a~~la~~g~~V~g~D~   31 (202)
T d1mv8a2           2 RISIFG-LGYVGAVCAGCLSARGHEVIGVDV   31 (202)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECS
T ss_pred             EEEEEC-CCHhHHHHHHHHHhCCCcEEEEeC
Confidence            466665 899999999999999999999985

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.05  E-value=0.008  Score=45.78  Aligned_cols=75  Identities=15%  Similarity=0.086  Sum_probs=46.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCC--C-HHHHHHHhhcCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG--D-AKAVNKFFSENA  145 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--d-~~~v~~~~~~~~  145 (267)
                      +.+|+|.|+ |++|...+..+...|+ +|++++.++    +..+..+++   +  +..+ .|-.  + .+.+.++....+
T Consensus        26 G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~----~rl~~a~~~---G--a~~~-~~~~~~~~~~~i~~~t~g~g   94 (195)
T d1kola2          26 GSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNP----ARLAHAKAQ---G--FEIA-DLSLDTPLHEQIAALLGEPE   94 (195)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCH----HHHHHHHHT---T--CEEE-ETTSSSCHHHHHHHHHSSSC
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhhcccceeeecccc----hhhHhhhhc---c--ccEE-EeCCCcCHHHHHHHHhCCCC
Confidence            379999985 9999888887777787 777777432    222333333   2  2211 1222  2 234555554467


Q ss_pred             CCEEEEcccc
Q 024488          146 FDAVMHFAAV  155 (267)
Q Consensus       146 ~D~li~~Ag~  155 (267)
                      +|++|.+.|.
T Consensus        95 ~D~vid~vG~  104 (195)
T d1kola2          95 VDCAVDAVGF  104 (195)
T ss_dssp             EEEEEECCCT
T ss_pred             cEEEEECccc
Confidence            9999999885

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.93  E-value=0.024  Score=38.85  Aligned_cols=95  Identities=12%  Similarity=0.066  Sum_probs=58.6

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCC
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAF  146 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  146 (267)
                      ..+ |+|+|.| +|-+|..-++.|++.|++|++++...  .++..+..    . ...+.++.-+..+. +    +.  +.
T Consensus        10 l~~-k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~--~~~~~~~~----~-~~~i~~~~~~~~~~-d----l~--~~   73 (113)
T d1pjqa1          10 LRD-RDCLIVG-GGDVAERKARLLLEAGARLTVNALTF--IPQFTVWA----N-EGMLTLVEGPFDET-L----LD--SC   73 (113)
T ss_dssp             CBT-CEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSC--CHHHHHHH----T-TTSCEEEESSCCGG-G----GT--TC
T ss_pred             eCC-CEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccC--ChHHHHHH----h-cCCceeeccCCCHH-H----hC--CC
Confidence            344 9999999 58899999999999999999988422  22222211    1 23566666555432 2    22  56


Q ss_pred             CEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEec
Q 024488          147 DAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (267)
Q Consensus       147 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS  196 (267)
                      +.++.+.+.                 -..+..+...+++.  +..||+..
T Consensus        74 ~lv~~at~d-----------------~~~n~~i~~~a~~~--~ilVNv~D  104 (113)
T d1pjqa1          74 WLAIAATDD-----------------DTVNQRVSDAAESR--RIFCNVVD  104 (113)
T ss_dssp             SEEEECCSC-----------------HHHHHHHHHHHHHT--TCEEEETT
T ss_pred             cEEeecCCC-----------------HHHHHHHHHHHHHc--CCEEEeCC
Confidence            777755331                 11234456666665  46788765

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.91  E-value=0.0063  Score=44.74  Aligned_cols=33  Identities=27%  Similarity=0.432  Sum_probs=28.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~  105 (267)
                      +|-|.| .|-+|+.+|+.|++.|++|++++|++.
T Consensus         2 kIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~   34 (161)
T d1vpda2           2 KVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPE   34 (161)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             EEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcc
Confidence            466777 799999999999999999999996543

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=95.90  E-value=0.013  Score=42.58  Aligned_cols=47  Identities=17%  Similarity=0.280  Sum_probs=35.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCCCCCcchhhhhhhc
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQEL  117 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~  117 (267)
                      ||+|.|.|+||-||.....-+.+.  .++|+.+.- ..+.+.+.++..+.
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa-~~N~~~L~~q~~~f   49 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVA-GKNVTRMVEQCLEF   49 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEE-SSCHHHHHHHHHHH
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEe-cCcHHHHHHHHHHH
Confidence            789999999999999999888775  478888763 24555555555555

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.89  E-value=0.038  Score=40.67  Aligned_cols=75  Identities=20%  Similarity=0.281  Sum_probs=54.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      -+|+|.| .|-.|.+-++.+...|++|.++|.+....    +.++...  +..++..   ..+.+.+++.++  ..|+||
T Consensus        33 a~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~~~~l----~~l~~~~--~~~~~~~---~~~~~~l~~~~~--~aDivI  100 (168)
T d1pjca1          33 GKVVILG-GGVVGTEAAKMAVGLGAQVQIFDINVERL----SYLETLF--GSRVELL---YSNSAEIETAVA--EADLLI  100 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHHHHHH--GGGSEEE---ECCHHHHHHHHH--TCSEEE
T ss_pred             cEEEEEC-CChHHHHHHHHHhhCCCEEEEEeCcHHHH----HHHHHhh--cccceee---hhhhhhHHHhhc--cCcEEE
Confidence            6899999 68999999999999999999999643322    2233322  1233332   357788888888  789999


Q ss_pred             EccccCC
Q 024488          151 HFAAVAY  157 (267)
Q Consensus       151 ~~Ag~~~  157 (267)
                      ..|-+..
T Consensus       101 ~aalipG  107 (168)
T d1pjca1         101 GAVLVPG  107 (168)
T ss_dssp             ECCCCTT
T ss_pred             EeeecCC
Confidence            9987643

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.89  E-value=0.017  Score=43.18  Aligned_cols=32  Identities=19%  Similarity=0.334  Sum_probs=27.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEEe
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVD  101 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G-~~V~~~~  101 (267)
                      |.+|.|.||||..|.++++.|.+.- .++..+.
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~   33 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLS   33 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEee
Confidence            6789999999999999999998864 4666665

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.86  E-value=0.011  Score=41.13  Aligned_cols=33  Identities=15%  Similarity=0.184  Sum_probs=30.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      ++|+|.| +|.||.++|..|++.|.+|+++.|..
T Consensus        23 ~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          23 KKIGIVG-SGYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CEEEEEC-CchHHHHHHHHHHhccccceeeehhc
Confidence            7899998 69999999999999999999999754

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.83  E-value=0.017  Score=42.91  Aligned_cols=34  Identities=12%  Similarity=0.277  Sum_probs=30.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~  105 (267)
                      ++|-|.| .|-+|..+|+.|++.|++|++++|++.
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~   36 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVS   36 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence            5688888 799999999999999999999997543

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.75  E-value=0.01  Score=41.01  Aligned_cols=34  Identities=24%  Similarity=0.325  Sum_probs=30.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~  105 (267)
                      |+++|.| +|.+|.++|..|.+.|++|+++.|.++
T Consensus        22 ~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEEC-CChhhHHHHHHhhccccEEEEEeecch
Confidence            7888888 699999999999999999999987543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.74  E-value=0.012  Score=40.75  Aligned_cols=33  Identities=27%  Similarity=0.453  Sum_probs=30.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      ++++|.| +|.||.++|..|.+.|.+|+++.|..
T Consensus        23 ~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          23 KSLVVIG-GGYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CeEEEEC-CCccceeeeeeecccccEEEEEEecc
Confidence            7899999 69999999999999999999998654

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.74  E-value=0.0029  Score=46.78  Aligned_cols=32  Identities=25%  Similarity=0.239  Sum_probs=27.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      +|.|.| .|-+|..+|+.|.+.|++|++.+|+.
T Consensus         2 kI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~   33 (165)
T d2f1ka2           2 KIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQ   33 (165)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             EEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCc
Confidence            466776 69999999999999999999998643

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.74  E-value=0.01  Score=41.49  Aligned_cols=33  Identities=42%  Similarity=0.663  Sum_probs=29.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      |+|+|.| +|++|.++|..|++.|.+|+++.+..
T Consensus        31 k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          31 NNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence            7888887 69999999999999999999998754

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.72  E-value=0.0049  Score=43.56  Aligned_cols=69  Identities=16%  Similarity=0.076  Sum_probs=47.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      |+++|.| -|-+|+++++.|.  |++|++++..+   +.. +.+.+     ..+.++.+|.++++.++++-- .+.+.+|
T Consensus         1 kHivI~G-~g~~g~~l~~~L~--~~~i~vi~~d~---~~~-~~~~~-----~~~~~i~Gd~~~~~~L~~a~i-~~A~~vi   67 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLRELR--GSEVFVLAEDE---NVR-KKVLR-----SGANFVHGDPTRVSDLEKANV-RGARAVI   67 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTSC--GGGEEEEESCT---THH-HHHHH-----TTCEEEESCTTSHHHHHHTTC-TTCSEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHc--CCCCEEEEcch---HHH-HHHHh-----cCccccccccCCHHHHHHhhh-hcCcEEE
Confidence            5789998 5889999999994  66787777432   222 22222     257889999999988877432 3567777


Q ss_pred             Ec
Q 024488          151 HF  152 (267)
Q Consensus       151 ~~  152 (267)
                      -+
T Consensus        68 ~~   69 (129)
T d2fy8a1          68 VN   69 (129)
T ss_dssp             EC
T ss_pred             Ee
Confidence            54

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.69  E-value=0.012  Score=40.88  Aligned_cols=34  Identities=24%  Similarity=0.324  Sum_probs=30.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~  105 (267)
                      ++++|.| +|.||.++|..|++.|++|+++.+..+
T Consensus        23 ~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          23 GKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEEC-CChHHHHHHHHHHHcCCceEEEEeecc
Confidence            7899999 699999999999999999999987543

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.68  E-value=0.0093  Score=41.68  Aligned_cols=34  Identities=26%  Similarity=0.456  Sum_probs=30.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~  105 (267)
                      ++++|.| +|++|.++|..|.++|.+|+++.+.++
T Consensus        31 ~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          31 SRLLIVG-GGVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEEC-cchhHHHHHHHhhcccceEEEEeeccc
Confidence            7898988 699999999999999999999997553

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.66  E-value=0.011  Score=41.45  Aligned_cols=33  Identities=21%  Similarity=0.257  Sum_probs=30.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      |+++|.| +|.||.++|..|.+.|.+|+++.|..
T Consensus        23 k~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVG-AGYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEc-CCccHHHHHHHHhcCCcEEEEEeecc
Confidence            7899999 68999999999999999999999754

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.64  E-value=0.011  Score=42.62  Aligned_cols=31  Identities=23%  Similarity=0.392  Sum_probs=25.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC---eEEEEe
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY---RVTIVD  101 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~---~V~~~~  101 (267)
                      ++|.|.||||..|+++++.|.++++   ++..+.
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~   36 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA   36 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEe
Confidence            5788999999999999999986654   676665

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.62  E-value=0.012  Score=41.03  Aligned_cols=33  Identities=21%  Similarity=0.304  Sum_probs=30.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      |+++|.| +|.||.++|..|.+.|++|+++.+.+
T Consensus        24 ~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          24 KRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CeEEEEC-CCchHHHHHHHHHhhCcceeEEEecc
Confidence            7899999 69999999999999999999998644

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.60  E-value=0.025  Score=37.70  Aligned_cols=70  Identities=19%  Similarity=0.194  Sum_probs=44.7

Q ss_pred             CcEEEEEcCCChhH-HHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCE
Q 024488           70 VTHVLVTGGAGYIG-SHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDA  148 (267)
Q Consensus        70 ~k~vlVTGasggIG-~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~  148 (267)
                      .|++.+.| -||+| +++|+.|.++|++|...|+..   ....+.+.+.     .+.+...+-  .+    .++  +.|.
T Consensus         8 ~~~ihfiG-igG~GMs~LA~~L~~~G~~VsGSD~~~---~~~~~~L~~~-----Gi~v~~g~~--~~----~i~--~~d~   70 (96)
T d1p3da1           8 VQQIHFIG-IGGAGMSGIAEILLNEGYQISGSDIAD---GVVTQRLAQA-----GAKIYIGHA--EE----HIE--GASV   70 (96)
T ss_dssp             CCEEEEET-TTSTTHHHHHHHHHHHTCEEEEEESCC---SHHHHHHHHT-----TCEEEESCC--GG----GGT--TCSE
T ss_pred             CCEEEEEE-ECHHHHHHHHHHHHhCCCEEEEEeCCC---ChhhhHHHHC-----CCeEEECCc--cc----cCC--CCCE
Confidence            48888888 56777 677999999999999998532   2222333322     234343332  22    122  6799


Q ss_pred             EEEccccC
Q 024488          149 VMHFAAVA  156 (267)
Q Consensus       149 li~~Ag~~  156 (267)
                      ||...++.
T Consensus        71 vV~S~AI~   78 (96)
T d1p3da1          71 VVVSSAIK   78 (96)
T ss_dssp             EEECTTSC
T ss_pred             EEECCCcC
Confidence            99887764

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.47  E-value=0.012  Score=45.74  Aligned_cols=34  Identities=35%  Similarity=0.515  Sum_probs=30.6

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      ..|+|+|.| +|-.|..+|..|+++|++|++++|.
T Consensus         5 ~~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           5 SQKRVVVLG-SGVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCC
Confidence            347899999 6999999999999999999999974

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.44  E-value=0.011  Score=45.34  Aligned_cols=32  Identities=25%  Similarity=0.310  Sum_probs=29.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r  102 (267)
                      +|+|+|-| .|.+|+++++.|.+.|++|++.+.
T Consensus        27 gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~   58 (201)
T d1c1da1          27 GLTVLVQG-LGAVGGSLASLAAEAGAQLLVADT   58 (201)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecc
Confidence            39999987 899999999999999999998874

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.39  E-value=0.0048  Score=45.66  Aligned_cols=33  Identities=24%  Similarity=0.471  Sum_probs=28.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNL  103 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~  103 (267)
                      ||+|+|.| .|.||..+|+.|.+.|+  +|++.+++
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~   35 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDIN   35 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECC
Confidence            68899998 69999999999999996  67777754

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.37  E-value=0.011  Score=41.16  Aligned_cols=33  Identities=24%  Similarity=0.494  Sum_probs=29.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      ++++|.| +|.+|.++|..|.+.|++|+++.+.+
T Consensus        33 ~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          33 GEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             SEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CcEEEEC-CcHHHHHHHHHhhcccceEEEEeccc
Confidence            7888888 69999999999999999999998644

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.36  E-value=0.012  Score=43.18  Aligned_cols=32  Identities=25%  Similarity=0.155  Sum_probs=27.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      .+|+|.| +|.||...+..+...|++|++++++
T Consensus        29 ~~vlv~G-~G~iG~~a~~~a~~~g~~v~~~~~~   60 (168)
T d1rjwa2          29 EWVAIYG-IGGLGHVAVQYAKAMGLNVVAVDIG   60 (168)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred             CEEEEee-cccchhhhhHHHhcCCCeEeccCCC
Confidence            7899987 5999999888888899999998853

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.29  E-value=0.014  Score=40.17  Aligned_cols=33  Identities=30%  Similarity=0.540  Sum_probs=29.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      ++++|.| +|.+|.++|..|.+.|++|+++.+.+
T Consensus        22 ~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          22 QHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHhhcccceEEEeeec
Confidence            7888888 69999999999999999999998754

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.28  E-value=0.029  Score=42.03  Aligned_cols=34  Identities=24%  Similarity=0.163  Sum_probs=30.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      +|++.|.| .|.||+.+++.+..-|.+|+..++..
T Consensus        42 gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~   75 (181)
T d1qp8a1          42 GEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTP   75 (181)
T ss_dssp             TCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CceEEEec-cccccccceeeeeccccccccccccc
Confidence            49999999 78899999999999999999998643

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.25  E-value=0.071  Score=37.43  Aligned_cols=86  Identities=15%  Similarity=0.136  Sum_probs=54.0

Q ss_pred             CcEEEEEcCC---ChhHHHHHHHHHhCC-CeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCC
Q 024488           70 VTHVLVTGGA---GYIGSHAALRLLKDS-YRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENA  145 (267)
Q Consensus        70 ~k~vlVTGas---ggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (267)
                      .|+|.|.|||   +..|..+.+.|.+.| ++|+.+-.   +.++.    .       .... .-++.|.      -  ..
T Consensus         8 PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP---~~~~i----~-------G~~~-y~sl~dl------p--~~   64 (129)
T d2csua1           8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNI---KEEEV----Q-------GVKA-YKSVKDI------P--DE   64 (129)
T ss_dssp             CSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECS---SCSEE----T-------TEEC-BSSTTSC------S--SC
T ss_pred             CCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEecc---Ccccc----C-------CeEe-ecchhhc------C--CC
Confidence            4899999999   899999999988766 68887652   11111    0       1111 1123222      1  26


Q ss_pred             CCEEEEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEec
Q 024488          146 FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (267)
Q Consensus       146 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS  196 (267)
                      +|.++-...                  -..+..+++.+.+.+.+.++..|+
T Consensus        65 vDlvvi~vp------------------~~~~~~~~~~~~~~g~~~~vi~s~   97 (129)
T d2csua1          65 IDLAIIVVP------------------KRFVKDTLIQCGEKGVKGVVIITA   97 (129)
T ss_dssp             CSEEEECSC------------------HHHHHHHHHHHHHHTCCEEEECCC
T ss_pred             CceEEEecC------------------hHHhHHHHHHHHHcCCCEEEEecc
Confidence            788875432                  123445677778888888888887

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.10  E-value=0.014  Score=40.87  Aligned_cols=34  Identities=32%  Similarity=0.405  Sum_probs=30.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~  105 (267)
                      ++++|.| +|.||.++|..|.+.|.+|+++.|+++
T Consensus        26 ~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          26 KKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             SEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEccc
Confidence            7899999 699999999999999999999987554

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.08  E-value=0.022  Score=40.36  Aligned_cols=34  Identities=35%  Similarity=0.639  Sum_probs=30.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR  105 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~  105 (267)
                      ++++|.| +|++|.++|..|.+.|.+|+++.+..+
T Consensus        36 k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          36 NRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEEC-CchHHHHHHHHHHhhCcceeeeeeccc
Confidence            7899998 799999999999999999999987554

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.94  E-value=0.012  Score=42.54  Aligned_cols=34  Identities=24%  Similarity=0.508  Sum_probs=30.4

Q ss_pred             CCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 024488           67 EEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (267)
Q Consensus        67 ~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r  102 (267)
                      ..+ |+|||.|| |.+|..-++.|++.|++|++++.
T Consensus        11 l~g-krvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          11 LKD-KRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             CTT-CEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             eCC-CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            445 99999996 88999999999999999999973

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=94.89  E-value=0.016  Score=45.26  Aligned_cols=32  Identities=19%  Similarity=0.260  Sum_probs=29.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r  102 (267)
                      +++|+|-| .|-+|+++|+.|.+.|++|++.+.
T Consensus        39 g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~   70 (230)
T d1leha1          39 GLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDV   70 (230)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecc
Confidence            39999988 899999999999999999999874

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=94.72  E-value=0.093  Score=42.14  Aligned_cols=31  Identities=23%  Similarity=0.245  Sum_probs=28.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEe
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVD  101 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~  101 (267)
                      +++|+|-| .|-+|+++|+.|.+.|++|+.++
T Consensus        36 gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          36 DKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEE
Confidence            38999988 79999999999999999999886

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.70  E-value=0.064  Score=38.73  Aligned_cols=47  Identities=19%  Similarity=0.229  Sum_probs=35.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCCCCCcchhhhhhhc
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNIGAVKVLQEL  117 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~  117 (267)
                      +|+|.|.|+||-||.....-+.+.  .++|+++.-. ++.+.+.+..++.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~-~N~~~L~~q~~ef   50 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN-RNVKDLADAAKRT   50 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES-SCHHHHHHHHHHT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC-CCHHHHHHHHHhh
Confidence            489999999999999999888765  5788888632 4555555555554

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=94.68  E-value=0.035  Score=38.85  Aligned_cols=33  Identities=21%  Similarity=0.360  Sum_probs=30.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      ++++|.| +|.||.++|..|.+.|.+|+++.+.+
T Consensus        27 ~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          27 GKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             SEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeec
Confidence            7899999 69999999999999999999998754

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.66  E-value=0.035  Score=41.45  Aligned_cols=35  Identities=29%  Similarity=0.300  Sum_probs=31.4

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      ..|+|+|.| +|-.|.+.|..|+++||+|+++.+..
T Consensus        42 ~~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          42 QKKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccC
Confidence            348999999 69999999999999999999999754

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=94.65  E-value=0.0078  Score=44.92  Aligned_cols=33  Identities=24%  Similarity=0.486  Sum_probs=28.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      |+|-|.| .|-+|..+++.|++.|++|.+++|+.
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~   34 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTY   34 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCH
Confidence            3466666 89999999999999999999998643

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.65  E-value=0.034  Score=38.35  Aligned_cols=33  Identities=12%  Similarity=0.109  Sum_probs=30.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      ++++|.| +|.||.++|..|.+.|.+|.++.+.+
T Consensus        23 ~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          23 STVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhcchhheEeeccc
Confidence            8899988 79999999999999999999998754

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.63  E-value=0.031  Score=38.88  Aligned_cols=32  Identities=28%  Similarity=0.264  Sum_probs=29.0

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      ++++|.| +|.||.++|..|.+.|++|+++.++
T Consensus        21 ~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            6788888 6999999999999999999999853

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.56  E-value=0.021  Score=44.97  Aligned_cols=33  Identities=33%  Similarity=0.401  Sum_probs=29.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      |+|+|.| +|.-|...|.+|++.|++|+++.++.
T Consensus         2 KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           2 KRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            8899998 68999999999999999999998643

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.49  E-value=0.024  Score=41.12  Aligned_cols=31  Identities=16%  Similarity=0.193  Sum_probs=26.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      ++.+.| +|-+|+++++.|.+.|++|++.+|+
T Consensus         2 kIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~   32 (152)
T d2ahra2           2 KIGIIG-VGKMASAIIKGLKQTPHELIISGSS   32 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred             EEEEEe-ccHHHHHHHHHHHhCCCeEEEEcCh
Confidence            456666 8999999999999999999998854

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.45  E-value=0.076  Score=37.06  Aligned_cols=75  Identities=21%  Similarity=0.282  Sum_probs=52.0

Q ss_pred             CcEEEEEcCC----------ChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHH
Q 024488           70 VTHVLVTGGA----------GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK  139 (267)
Q Consensus        70 ~k~vlVTGas----------ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~  139 (267)
                      .|+|||.|+.          -+-+.+.+++|.+.|++++++..++..   .....       .-..-+..+--..+++.+
T Consensus         7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~T---Vstd~-------d~aD~lYfePlt~e~v~~   76 (127)
T d1a9xa3           7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPAT---IMTDP-------EMADATYIEPIHWEVVRK   76 (127)
T ss_dssp             CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTC---GGGCG-------GGSSEEECSCCCHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHh---hhcCh-------hhcceeeeecCCHHHHHH
Confidence            3899999973          356788999999999999998744322   21110       111223455567889999


Q ss_pred             HhhcCCCCEEEEccc
Q 024488          140 FFSENAFDAVMHFAA  154 (267)
Q Consensus       140 ~~~~~~~D~li~~Ag  154 (267)
                      .++..++|.++-..|
T Consensus        77 Ii~~E~pd~il~~~G   91 (127)
T d1a9xa3          77 IIEKERPDAVLPTMG   91 (127)
T ss_dssp             HHHHHCCSEEECSSS
T ss_pred             HHHHhCcCCeEEEee
Confidence            998888999886654

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=94.40  E-value=0.019  Score=45.24  Aligned_cols=30  Identities=30%  Similarity=0.445  Sum_probs=27.9

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      |+|.| +|-+|..+|.+|+++|++|+++++.
T Consensus         7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~   36 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAKENKNTALFESG   36 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            88888 6999999999999999999999974

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.34  E-value=0.016  Score=44.08  Aligned_cols=34  Identities=24%  Similarity=0.102  Sum_probs=30.6

Q ss_pred             CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           69 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        69 ~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      .+|+|.|.| .|.||+.+|+.|..-|++|+..++.
T Consensus        42 ~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~   75 (197)
T d1j4aa1          42 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIF   75 (197)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             cCCeEEEec-ccccchhHHHhHhhhcccccccCcc
Confidence            349999999 8999999999999999999998853

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.29  E-value=0.07  Score=40.24  Aligned_cols=34  Identities=24%  Similarity=0.276  Sum_probs=30.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      +|++.|.| .|.||+.+++.|..-|++|+..++..
T Consensus        49 gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~   82 (193)
T d1mx3a1          49 GETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYL   82 (193)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred             CceEEEec-cccccccceeeeeccccceeeccCcc
Confidence            49999998 89999999999999999999988643

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.21  E-value=0.05  Score=39.21  Aligned_cols=34  Identities=21%  Similarity=0.308  Sum_probs=28.0

Q ss_pred             cEEEEE-cCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           71 THVLVT-GGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVT-GasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      +.++|. .++|+||.++|..|++.|++|+++.+..
T Consensus        40 ~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          40 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            455554 4679999999999999999999998643

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.12  E-value=0.031  Score=35.64  Aligned_cols=33  Identities=21%  Similarity=0.034  Sum_probs=30.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      ||+|.|.| +|.+|+-++.+..+.|++|++++..
T Consensus         1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~   33 (78)
T d3etja2           1 MKQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLD   33 (78)
T ss_dssp             CEEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTT
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCC
Confidence            58999999 7999999999999999999999853

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.10  E-value=0.031  Score=41.59  Aligned_cols=35  Identities=23%  Similarity=0.284  Sum_probs=30.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSR  105 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~~  105 (267)
                      .|+|+|.| +|-.|...|..|+++|+ +|+++.++..
T Consensus         4 ~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLG-AGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            38899999 69999999999999998 5999987543

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=94.10  E-value=0.11  Score=38.69  Aligned_cols=39  Identities=23%  Similarity=0.152  Sum_probs=32.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcch
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGA  110 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~  110 (267)
                      -+|+|.| .|-.|.+-++.....|++|.++|.+....+.+
T Consensus        30 a~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l   68 (183)
T d1l7da1          30 ARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQV   68 (183)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             cEEEEEc-CcHHHHHHHHHHHHcCCEEEEEeccHHHHHHH
Confidence            5899999 58999999999999999999999765444333

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=93.91  E-value=0.037  Score=45.05  Aligned_cols=34  Identities=26%  Similarity=0.507  Sum_probs=30.4

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      +|+|+|.| +|.-|..+|..|++.|++|.++.++.
T Consensus         2 ~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCC
Confidence            38999999 79999999999999999999998644

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=93.75  E-value=0.027  Score=41.50  Aligned_cols=33  Identities=18%  Similarity=0.333  Sum_probs=30.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r  102 (267)
                      +|+|+|.|.|.-+|+-++..|.++|++|+++..
T Consensus        37 GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~   69 (166)
T d1b0aa1          37 GLNAVVIGASNIVGRPMSMELLLAGCTTTVTHR   69 (166)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHTTTCEEEEECS
T ss_pred             cceEEEEeccccccHHHHHHHHHhhcccccccc
Confidence            399999999999999999999999999998763

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.74  E-value=0.045  Score=40.13  Aligned_cols=33  Identities=27%  Similarity=0.202  Sum_probs=30.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      +|+|+|.| .|.||+.+|+.|...|++|++++..
T Consensus        24 Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~d   56 (163)
T d1li4a1          24 GKVAVVAG-YGDVGKGCAQALRGFGARVIITEID   56 (163)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCEEEEec-cccccHHHHHHHHhCCCeeEeeecc
Confidence            49999999 8999999999999999999999853

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.62  E-value=0.078  Score=40.85  Aligned_cols=34  Identities=38%  Similarity=0.547  Sum_probs=30.7

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      .|+|+|.| +|..|...|.+|+++|++|+++.+..
T Consensus        49 ~k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          49 KDSVLIVG-AGPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CceEEEEc-ccHHHHHHHHHHHHhccceeeEeecc
Confidence            48999999 69999999999999999999998644

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=93.54  E-value=0.057  Score=41.92  Aligned_cols=33  Identities=24%  Similarity=0.304  Sum_probs=29.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      ++|+|.| +|--|..+|..|+++|++|+++.+++
T Consensus         5 ~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           5 DRIAVVG-GSISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            7899999 69999999999999999999998643

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.48  E-value=0.045  Score=43.76  Aligned_cols=34  Identities=32%  Similarity=0.459  Sum_probs=30.3

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      .|+|+|.| +|-.|...|..|+++|++|+++.+..
T Consensus        30 pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          30 PKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            38999999 68999999999999999999998643

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.45  E-value=0.023  Score=45.95  Aligned_cols=30  Identities=23%  Similarity=0.255  Sum_probs=24.7

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~~V~~~~r  102 (267)
                      .+=--.||-.|.++|++|+.+|++|+++.+
T Consensus        39 ~ItN~SSGk~G~alA~~~~~~Ga~V~li~g   68 (290)
T d1p9oa_          39 FLDNFSSGRRGATSAEAFLAAGYGVLFLYR   68 (290)
T ss_dssp             EEEECCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             EeCCCCchHHHHHHHHHHHHcCCEEEEEec
Confidence            333345788999999999999999999974

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.43  E-value=0.28  Score=36.45  Aligned_cols=33  Identities=18%  Similarity=0.106  Sum_probs=29.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      .+++.|.| .|.||+.+++.+..-|.+|+..++.
T Consensus        44 ~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~   76 (188)
T d1sc6a1          44 GKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIE   76 (188)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             ceEEEEee-cccchhhhhhhcccccceEeecccc
Confidence            38999987 8999999999999999999999853

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=93.35  E-value=0.21  Score=37.42  Aligned_cols=35  Identities=20%  Similarity=0.133  Sum_probs=30.8

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      ..++++.|.| .|.||+.+++.+..-|.+|...++.
T Consensus        45 l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~   79 (191)
T d1gdha1          45 LDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTH   79 (191)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSS
T ss_pred             ecccceEEee-cccchHHHHHHHHhhcccccccccc
Confidence            3349999998 8999999999999999999998854

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.32  E-value=0.17  Score=35.68  Aligned_cols=69  Identities=16%  Similarity=0.130  Sum_probs=42.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc---CCCC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE---NAFD  147 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~~~D  147 (267)
                      +|.|.|++|-+|+.+++.+.+. +++++..--  + .+.... ..   ..+..   +..|++.++.+.+.++.   .++-
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d--~-~~~~~~-~~---~~~~D---vvIDFS~p~~~~~~~~~~~~~~~~   70 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELD--A-GDPLSL-LT---DGNTE---VVIDFTHPDVVMGNLEFLIDNGIH   70 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEEC--T-TCCTHH-HH---TTTCS---EEEECCCTTTHHHHHHHHHHTTCE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe--c-CCchhh-hc---cccCC---EEEEcccHHHHHHHHHHHHhcCCC
Confidence            6899999999999999987664 677765431  1 111111 11   11112   45789888766655543   4566


Q ss_pred             EEE
Q 024488          148 AVM  150 (267)
Q Consensus       148 ~li  150 (267)
                      +|+
T Consensus        71 ~Vi   73 (135)
T d1yl7a1          71 AVV   73 (135)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            666

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.19  E-value=0.088  Score=44.76  Aligned_cols=32  Identities=25%  Similarity=0.432  Sum_probs=28.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNL  103 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~  103 (267)
                      .+|||.|+ ||||.++++.|+..|. ++.++|..
T Consensus        38 ~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          38 CKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             CCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            68999995 8899999999999997 89998853

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=93.13  E-value=0.12  Score=38.55  Aligned_cols=31  Identities=23%  Similarity=0.557  Sum_probs=26.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCC-CeEEEEe
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDS-YRVTIVD  101 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G-~~V~~~~  101 (267)
                      .+|.|.||||..|.++++.|.++- .++..+.
T Consensus         6 ikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           6 VRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            579999999999999999999874 4666655

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.11  E-value=0.04  Score=40.72  Aligned_cols=33  Identities=24%  Similarity=0.269  Sum_probs=31.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r  102 (267)
                      +|+|+|.|.|.-+|+-++.-|+++|++|+.+..
T Consensus        39 Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~   71 (170)
T d1a4ia1          39 GRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHS   71 (170)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred             cceEEEEecCCccchHHHHHHHhccCceEEEec
Confidence            399999999999999999999999999999874

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=92.97  E-value=0.025  Score=40.88  Aligned_cols=32  Identities=28%  Similarity=0.453  Sum_probs=26.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDS-YRVTIVDNLS  104 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G-~~V~~~~r~~  104 (267)
                      +|.+.| .|-+|.++++.|++.| ++|++++|+.
T Consensus         2 kI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~~   34 (152)
T d1yqga2           2 NVYFLG-GGNMAAAVAGGLVKQGGYRIYIANRGA   34 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred             EEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeCCh
Confidence            466667 5999999999998887 9999998654

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.93  E-value=0.28  Score=36.37  Aligned_cols=34  Identities=29%  Similarity=0.208  Sum_probs=30.1

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      +|++.|.| .|.||+++++.+..-|.+|+..++..
T Consensus        44 ~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~   77 (184)
T d1ygya1          44 GKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYV   77 (184)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred             ceeeeecc-ccchhHHHHHHhhhccceEEeecCCC
Confidence            48999988 79999999999999999999988643

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.89  E-value=0.067  Score=37.53  Aligned_cols=30  Identities=10%  Similarity=0.155  Sum_probs=26.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIV  100 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~  100 (267)
                      ++|.|.|++|-+|+.+++.+.++|++++..
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~   30 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK   30 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence            469999999999999999999999988764

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=92.89  E-value=0.094  Score=34.20  Aligned_cols=69  Identities=20%  Similarity=0.205  Sum_probs=42.2

Q ss_pred             cEEEEEcCCChhHH-HHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGS-HAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~-~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      ++|-+.| -||+|- .||+.|.++|++|...|+..   ....+.+++.   +  +.+....  +.+.    ++  +.|.|
T Consensus         2 ~~ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~~---~~~t~~L~~~---G--i~i~~gh--~~~~----i~--~~d~v   64 (89)
T d1j6ua1           2 MKIHFVG-IGGIGMSAVALHEFSNGNDVYGSNIEE---TERTAYLRKL---G--IPIFVPH--SADN----WY--DPDLV   64 (89)
T ss_dssp             CEEEEET-TTSHHHHHHHHHHHHTTCEEEEECSSC---CHHHHHHHHT---T--CCEESSC--CTTS----CC--CCSEE
T ss_pred             cEEEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCCC---ChhHHHHHHC---C--CeEEeee--cccc----cC--CCCEE
Confidence            4566666 567775 78999999999999998542   2333334443   2  3333221  1111    12  67999


Q ss_pred             EEccccC
Q 024488          150 MHFAAVA  156 (267)
Q Consensus       150 i~~Ag~~  156 (267)
                      |...++.
T Consensus        65 V~SsAI~   71 (89)
T d1j6ua1          65 IKTPAVR   71 (89)
T ss_dssp             EECTTCC
T ss_pred             EEecCcC
Confidence            9988764

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=92.81  E-value=0.15  Score=38.01  Aligned_cols=34  Identities=26%  Similarity=0.224  Sum_probs=30.5

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      .+++.|.| .|.||+++++.|..-|.+|...++..
T Consensus        44 ~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          44 AMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             ccceeecc-ccccchhhhhhhhccCceEEEEeecc
Confidence            48999988 89999999999999999999998643

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=92.80  E-value=0.27  Score=33.75  Aligned_cols=75  Identities=19%  Similarity=0.212  Sum_probs=51.0

Q ss_pred             CcEEEEEcCCC----------hhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHH
Q 024488           70 VTHVLVTGGAG----------YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNK  139 (267)
Q Consensus        70 ~k~vlVTGasg----------gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~  139 (267)
                      .|+|||.|+..          +-+.+.+++|.+.|++++++..++..-.   -       ...-..-+..+--..+.+.+
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVs---t-------d~d~aD~lYfeplt~e~v~~   73 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVS---T-------DYDTSDRLYFEPVTLEDVLE   73 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSST---T-------STTSSSEEECCCCSHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhh---c-------ChhhcCceEEccCCHHHHHH
Confidence            37899999743          5678999999999999999885443221   0       01112223445557788888


Q ss_pred             HhhcCCCCEEEEccc
Q 024488          140 FFSENAFDAVMHFAA  154 (267)
Q Consensus       140 ~~~~~~~D~li~~Ag  154 (267)
                      .++..++|.++-..|
T Consensus        74 Ii~~E~p~~ii~~~G   88 (121)
T d1a9xa4          74 IVRIEKPKGVIVQYG   88 (121)
T ss_dssp             HHHHHCCSEEECSSS
T ss_pred             HHHHhCCCEEEeehh
Confidence            888778898876544

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.57  E-value=0.068  Score=40.45  Aligned_cols=31  Identities=26%  Similarity=0.265  Sum_probs=28.1

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      |+|.| +|.-|...|..|+++|++|.++.++.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            78888 79999999999999999999998753

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=92.57  E-value=0.058  Score=42.22  Aligned_cols=33  Identities=21%  Similarity=0.299  Sum_probs=28.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      ++|+|.| +|--|...|..|+++|++|+++.++.
T Consensus         1 m~V~IIG-aG~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVG-GGISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEEC-CBHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHhCCCCEEEEecCC
Confidence            3588889 49999999999999999999998643

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.49  E-value=0.052  Score=39.06  Aligned_cols=30  Identities=23%  Similarity=0.164  Sum_probs=25.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r  102 (267)
                      +|-|.| .|-+|+.+++.|++.|++|+..++
T Consensus         2 kIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~   31 (152)
T d1i36a2           2 RVGFIG-FGEVAQTLASRLRSRGVEVVTSLE   31 (152)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCEEEECCT
T ss_pred             EEEEEc-HHHHHHHHHHHHHHCCCeEEEEcC
Confidence            455666 799999999999999999998775

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=92.31  E-value=0.37  Score=37.38  Aligned_cols=32  Identities=28%  Similarity=0.349  Sum_probs=28.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r  102 (267)
                      +++|+|-| .|-+|+++|+.|.+.|++|+.++-
T Consensus        31 g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          31 GKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            39999987 999999999999999999988763

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.11  E-value=0.11  Score=41.07  Aligned_cols=32  Identities=28%  Similarity=0.376  Sum_probs=28.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      ++|+|.| +|--|...|.+|+++|++|+++..+
T Consensus         6 ~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           6 GKVIIIG-SGVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CEEEEEC-CBHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCC
Confidence            6799999 6999999999999999999998754

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=92.04  E-value=0.22  Score=37.55  Aligned_cols=76  Identities=12%  Similarity=0.127  Sum_probs=44.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCC------cchhhhhhhcCCCCCceEEEE-ccCCCHHHHHHHhhcC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGN------IGAVKVLQELFPEPGRLQFIY-ADLGDAKAVNKFFSEN  144 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~-~Dl~d~~~v~~~~~~~  144 (267)
                      +++|.| ++..|..+.+.|.+.|++|..+.-.+++.      ....+..++.     ++.++. -|+.+.+.++ .++..
T Consensus         2 kiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~-----~i~~~~~~~~~~~~~~~-~i~~~   74 (203)
T d2blna2           2 KTVVFA-YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAER-----GIPVYAPDNVNHPLWVE-RIAQL   74 (203)
T ss_dssp             EEEEEE-CHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHH-----TCCEECCSCCCSHHHHH-HHHHT
T ss_pred             eEEEEe-cCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHc-----CCcceecccccchhhhh-hhhhh
Confidence            445555 67789999999999999997765222211      1111111221     343333 4666665554 44456


Q ss_pred             CCCEEEEccc
Q 024488          145 AFDAVMHFAA  154 (267)
Q Consensus       145 ~~D~li~~Ag  154 (267)
                      ++|++|....
T Consensus        75 ~~Dlii~~g~   84 (203)
T d2blna2          75 SPDVIFSFYY   84 (203)
T ss_dssp             CCSEEEEESC
T ss_pred             cccceeeeec
Confidence            8998887653

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=91.98  E-value=0.11  Score=42.31  Aligned_cols=36  Identities=25%  Similarity=0.362  Sum_probs=30.3

Q ss_pred             CCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCC
Q 024488           68 EGVTHVLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLS  104 (267)
Q Consensus        68 ~~~k~vlVTGasggIG~~la~~L~~~G--~~V~~~~r~~  104 (267)
                      +.||+|+|.| +|--|..+|..|+++|  ++|+++.+..
T Consensus         2 ~~~KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           2 PTIRKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CSCCEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CCCCeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            4579999999 6899999999999887  5999998753

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=91.73  E-value=0.087  Score=42.32  Aligned_cols=34  Identities=21%  Similarity=0.386  Sum_probs=30.0

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      |..|+|.| +|.-|..+|.+|++.|++|.++.++.
T Consensus         1 M~dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           1 MYDYIIVG-SGLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             CccEEEEC-CcHHHHHHHHHHHhCCCcEEEEECCC
Confidence            56789999 79999999999999999999998643

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=91.62  E-value=0.11  Score=40.49  Aligned_cols=32  Identities=28%  Similarity=0.398  Sum_probs=28.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNL  103 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~  103 (267)
                      ++|+|.| .||+|.+++..|+..|. +++++|..
T Consensus        31 ~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          31 SRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            7999999 79999999999999997 88888743

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.54  E-value=0.36  Score=42.04  Aligned_cols=31  Identities=26%  Similarity=0.330  Sum_probs=27.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEec
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDN  102 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r  102 (267)
                      .+|+|.| .||+|.++++.|+..|. +++++|.
T Consensus        26 s~VlvvG-~gglG~Ei~knLvl~GVg~itivD~   57 (529)
T d1yova1          26 AHVCLIN-ATATGTEILKNLVLPGIGSFTIIDG   57 (529)
T ss_dssp             CEEEECC-CSHHHHHHHHHHHTTTCSEEEEECC
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHhcCCEEEEEcC
Confidence            6899998 48999999999999996 7888875

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=91.41  E-value=0.16  Score=38.25  Aligned_cols=34  Identities=26%  Similarity=0.178  Sum_probs=30.8

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      +|+|.|.| .|.||+.+++.|..-|++|++.++..
T Consensus        45 ~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          45 QQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             GSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ceeeeeee-cccccccccccccccceeeeccCCcc
Confidence            49999999 89999999999999999999998643

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=91.31  E-value=0.12  Score=37.34  Aligned_cols=34  Identities=26%  Similarity=0.291  Sum_probs=28.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLS  104 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~--~V~~~~r~~  104 (267)
                      +|+|+|.| +|.+|.++|..|.+.+.  +|+++++.+
T Consensus         2 gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            38999999 69999999999999874  788887543

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=91.11  E-value=0.12  Score=37.24  Aligned_cols=25  Identities=24%  Similarity=0.356  Sum_probs=22.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY   95 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~   95 (267)
                      -+|.|.||||+.|.++++.|.++.+
T Consensus         2 ~kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           2 YTVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHcCCC
Confidence            4789999999999999999988754

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.01  E-value=0.088  Score=41.62  Aligned_cols=34  Identities=21%  Similarity=0.251  Sum_probs=29.2

Q ss_pred             Cc-EEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           70 VT-HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        70 ~k-~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      || +|+|.|| |-.|..+|..|.+.|++|+++.+.+
T Consensus         1 mk~~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           1 MKTQVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             CBCSEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CCCCEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            45 5999994 6999999999999999999998643

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.92  E-value=0.093  Score=40.01  Aligned_cols=34  Identities=32%  Similarity=0.355  Sum_probs=29.3

Q ss_pred             CcEEEEEcCCChhHHH-----HHHHHHhCCCeEEEEecC
Q 024488           70 VTHVLVTGGAGYIGSH-----AALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        70 ~k~vlVTGasggIG~~-----la~~L~~~G~~V~~~~r~  103 (267)
                      ||+|.|+++-||.|+.     +|..|+++|.+|.++|-.
T Consensus         1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D   39 (232)
T d1hyqa_           1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDAD   39 (232)
T ss_dssp             CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            6999999999999975     456788999999999854

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=90.75  E-value=0.13  Score=40.28  Aligned_cols=30  Identities=37%  Similarity=0.609  Sum_probs=27.5

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      |+|.| +|-.|..+|.+|+++|++|+++++.
T Consensus         6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            78888 6899999999999999999999874

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.55  E-value=0.15  Score=39.53  Aligned_cols=30  Identities=33%  Similarity=0.420  Sum_probs=26.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHh-CCCeEEEEe
Q 024488           71 THVLVTGGAGYIGSHAALRLLK-DSYRVTIVD  101 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~-~G~~V~~~~  101 (267)
                      ++|.|-| .|-+|+++++.|.+ .|++|+.++
T Consensus        32 ~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          32 ATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            8998887 99999999999975 599999876

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=90.49  E-value=0.1  Score=41.04  Aligned_cols=34  Identities=21%  Similarity=0.236  Sum_probs=28.8

Q ss_pred             CcEEEEEcCCChhHHHHH-----HHHHhCCCeEEEEecCC
Q 024488           70 VTHVLVTGGAGYIGSHAA-----LRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la-----~~L~~~G~~V~~~~r~~  104 (267)
                      ||+|.|+| -||+|+.+.     ..|++.|++|.++|-.+
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~   39 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDP   39 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECT
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence            68999998 999998654     58899999999999654

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.43  E-value=0.73  Score=35.56  Aligned_cols=31  Identities=23%  Similarity=0.276  Sum_probs=26.9

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhC-CCeEEEEe
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKD-SYRVTIVD  101 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~-G~~V~~~~  101 (267)
                      +|+|+|-| .|-+|+++++.|+++ |++|+.+.
T Consensus        32 g~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          32 GKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHhcCcceeecc
Confidence            38999988 799999999999864 99998876

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=90.31  E-value=0.34  Score=32.86  Aligned_cols=33  Identities=27%  Similarity=0.291  Sum_probs=26.1

Q ss_pred             cEEEEEcCCChhHHHHHHHHH---hCCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLL---KDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~---~~G~~V~~~~r~~  104 (267)
                      ++++|.|| |.+|.++|..|.   .+|.+|+++.+.+
T Consensus        21 ~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          21 RRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             SEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            78999995 999999996655   4567899998643

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=90.09  E-value=0.38  Score=32.47  Aligned_cols=33  Identities=21%  Similarity=0.191  Sum_probs=27.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHh---CCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLK---DSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~---~G~~V~~~~r~~  104 (267)
                      ++++|.| +|.+|.++|..|.+   .|.+|.++.+.+
T Consensus        19 ~~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          19 KRALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             SEEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CeEEEEC-CChHHHHHHHHhHhhcccccccceecccc
Confidence            7899999 69999999976554   588999998754

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=89.80  E-value=0.12  Score=37.88  Aligned_cols=78  Identities=18%  Similarity=0.242  Sum_probs=38.9

Q ss_pred             cEEEEEcCCChhHHH-HHHHHHhC-----CCeEEEEecCCCCCcchhhhhhhcCC-CCCceEEEEccCCCHHHHHHHhhc
Q 024488           71 THVLVTGGAGYIGSH-AALRLLKD-----SYRVTIVDNLSRGNIGAVKVLQELFP-EPGRLQFIYADLGDAKAVNKFFSE  143 (267)
Q Consensus        71 k~vlVTGasggIG~~-la~~L~~~-----G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~  143 (267)
                      .+|.|.||++ +|.. ++..++..     +.++++.|..+...+...+.++.... .+........  +|   ..++++ 
T Consensus         4 ~KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d---~~eal~-   76 (167)
T d1u8xx1           4 FSIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TD---PEEAFT-   76 (167)
T ss_dssp             EEEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SC---HHHHHS-
T ss_pred             ceEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CC---hhhccC-
Confidence            4667778744 4554 33444432     24899998544332222232222211 1222222221  12   234454 


Q ss_pred             CCCCEEEEccccC
Q 024488          144 NAFDAVMHFAAVA  156 (267)
Q Consensus       144 ~~~D~li~~Ag~~  156 (267)
                       +.|+||+.||..
T Consensus        77 -~AD~Vvitag~~   88 (167)
T d1u8xx1          77 -DVDFVMAHIRVG   88 (167)
T ss_dssp             -SCSEEEECCCTT
T ss_pred             -CCCEEEECCCcC
Confidence             789999999874

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=89.71  E-value=0.17  Score=40.19  Aligned_cols=32  Identities=25%  Similarity=0.576  Sum_probs=27.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS  104 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~  104 (267)
                      .|+|.| +|-+|..+|.+|+++|. +|+++++..
T Consensus         3 dViIIG-aGi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIG-AGIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            588888 68999999999999996 699998753

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=89.65  E-value=0.18  Score=38.13  Aligned_cols=32  Identities=34%  Similarity=0.479  Sum_probs=27.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS  104 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~  104 (267)
                      +|+|.| +|--|...|..|+++|+ +|+++.++.
T Consensus         2 ~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVG-AGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEEC-CBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEEC-CcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            588888 69999999999999996 799998643

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.48  E-value=0.19  Score=36.49  Aligned_cols=32  Identities=22%  Similarity=0.287  Sum_probs=26.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      ++|+|.| +|.+|.++|..|.+.|++|.++.+.
T Consensus         4 ~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~~   35 (185)
T d1q1ra1           4 DNVVIVG-TGLAGVEVAFGLRASGWEGNIRLVG   35 (185)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCEEEEC-CcHHHHHHHHHHHHcCCceEEEEec
Confidence            7888888 7999999999999999876665543

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=89.42  E-value=0.17  Score=37.12  Aligned_cols=117  Identities=12%  Similarity=0.006  Sum_probs=59.6

Q ss_pred             cEEEEEcCCChhHHH--HHHHHHhC----CCeEEEEecCCCCCcchhhhhhhcC-CCCCceEEEEccCCCHHHHHHHhhc
Q 024488           71 THVLVTGGAGYIGSH--AALRLLKD----SYRVTIVDNLSRGNIGAVKVLQELF-PEPGRLQFIYADLGDAKAVNKFFSE  143 (267)
Q Consensus        71 k~vlVTGasggIG~~--la~~L~~~----G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~  143 (267)
                      +||.|.|| |.+|..  ++..|+..    +.+++++|.++...+......++.. ..+....+...  +|.   +++++ 
T Consensus         3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--td~---~eaL~-   75 (171)
T d1obba1           3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MNL---DDVII-   75 (171)
T ss_dssp             CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SCH---HHHHT-
T ss_pred             cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--CCh---hhccc-
Confidence            57777885 777765  33444433    4699999964433222222222211 11223333222  233   34555 


Q ss_pred             CCCCEEEEccccCCcCCCccC----------------------h--HHHHHHhHHHHHHHHHHHHHcCCC-EEEEEe
Q 024488          144 NAFDAVMHFAAVAYVGESTLD----------------------P--LKYYHNITSNTLVVLESMARHGVD-TLIYSS  195 (267)
Q Consensus       144 ~~~D~li~~Ag~~~~~~~~~~----------------------~--~~~~~~~~~~~~~~l~~~~~~~~~-~iV~vS  195 (267)
                       +.|++|+.+++........+                      +  ......|....+.+++.+.+.... .+|++|
T Consensus        76 -dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~T  151 (171)
T d1obba1          76 -DADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAA  151 (171)
T ss_dssp             -TCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             -CCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEEC
Confidence             78999999876421100000                      0  000124666677888888887754 444444

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=89.24  E-value=0.77  Score=33.11  Aligned_cols=30  Identities=17%  Similarity=0.262  Sum_probs=25.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC-CCeEEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIV  100 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~-G~~V~~~  100 (267)
                      .+|.|.|++|-+|+.+++.+.+. +.+++..
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~   35 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAA   35 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEE
Confidence            68999999999999999998775 6666554

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=89.08  E-value=0.28  Score=36.71  Aligned_cols=81  Identities=17%  Similarity=0.081  Sum_probs=55.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      ..+=+|-|+||.-.++.+.+ . +.+|+++|+.+...+.+.+.++..   +.++.++.++..+.+.+..-.....+|.|+
T Consensus        26 ~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~---~~r~~~~~~~f~~~~~~~~~~~~~~vdgIl  100 (192)
T d1m6ya2          26 IILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF---SDRVSLFKVSYREADFLLKTLGIEKVDGIL  100 (192)
T ss_dssp             EEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG---TTTEEEEECCGGGHHHHHHHTTCSCEEEEE
T ss_pred             EEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccc---cccccchhHHHhhHHHHHHHcCCCCcceee
Confidence            44557888888888888776 3 578999997544333333333332   457999999988877665554446899999


Q ss_pred             EccccC
Q 024488          151 HFAAVA  156 (267)
Q Consensus       151 ~~Ag~~  156 (267)
                      .-.|+.
T Consensus       101 ~DlGvS  106 (192)
T d1m6ya2         101 MDLGVS  106 (192)
T ss_dssp             EECSCC
T ss_pred             eccchh
Confidence            888874

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=88.96  E-value=0.68  Score=36.13  Aligned_cols=30  Identities=20%  Similarity=0.234  Sum_probs=28.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEe
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVD  101 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~  101 (267)
                      ++|+|-| .|-+|+++++.|.+.|++|+.+.
T Consensus        37 ~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          37 KTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            8999988 89999999999999999999875

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=88.81  E-value=0.16  Score=37.31  Aligned_cols=77  Identities=16%  Similarity=-0.053  Sum_probs=45.7

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcC----------CCCCceEEEEccCCCHHHHHHH
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELF----------PEPGRLQFIYADLGDAKAVNKF  140 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~----------~~~~~~~~~~~Dl~d~~~v~~~  140 (267)
                      ++||..|...|  + .+..|+++|++|+.+|.+....+.+.+..++..          .......++.+|..+......-
T Consensus        22 ~rvLd~GCG~G--~-~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~   98 (201)
T d1pjza_          22 ARVLVPLCGKS--Q-DMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIG   98 (201)
T ss_dssp             CEEEETTTCCS--H-HHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHH
T ss_pred             CEEEEecCcCC--H-HHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccccccc
Confidence            79999996544  4 666888999999999965433333322221110          0123456788888765432221


Q ss_pred             hhcCCCCEEEEccc
Q 024488          141 FSENAFDAVMHFAA  154 (267)
Q Consensus       141 ~~~~~~D~li~~Ag  154 (267)
                          ..|.|+....
T Consensus        99 ----~~D~i~~~~~  108 (201)
T d1pjza_          99 ----HCAAFYDRAA  108 (201)
T ss_dssp             ----SEEEEEEESC
T ss_pred             ----ceeEEEEEee
Confidence                4577765443

>d1jyea_ c.93.1.1 (A:) Lac-repressor (lacR) core (C-terminal domain) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like I
superfamily: Periplasmic binding protein-like I
family: L-arabinose binding protein-like
domain: Lac-repressor (lacR) core (C-terminal domain)
species: Escherichia coli [TaxId: 562]

Probab=88.80  E-value=0.88  Score=35.18  Aligned_cols=110  Identities=12%  Similarity=-0.020  Sum_probs=60.4

Q ss_pred             hhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEEEccccCCcCC
Q 024488           81 YIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVMHFAAVAYVGE  160 (267)
Q Consensus        81 gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li~~Ag~~~~~~  160 (267)
                      -|-.++-+++.+.||+|++..-.....+...+.++.+...+-...++..+..+.+.+...+...++=+|+.....  ...
T Consensus        17 ~i~~~i~~~a~~~Gy~v~v~~~~~~~~~~~~~~l~~l~~~~vdgiIl~~~~~~~~~~~~~~~~~~iPvV~~d~~~--~~~   94 (271)
T d1jyea_          17 QIVAAILSRADQLGASVVVSMVERSGVEACKTAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSD--QTP   94 (271)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEECCSSSHHHHHHHHHHHHTTTCSCEEEESCCCHHHHHHHHHHTTTSCEEESSSCT--TSS
T ss_pred             HHHHHHHHHHHHcCCEEEEEECCCCCHHHHHHHHHHHHhcCCCEEEeccccCchhHHHHHHHhcCCCeeeeeccc--ccc
Confidence            355677788889999998865322223333344454433333333444555554444444444455555553211  111


Q ss_pred             CccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEec
Q 024488          161 STLDPLKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (267)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS  196 (267)
                      .    ....-.|..+...+.+.+.++|.++|.+++.
T Consensus        95 ~----~~V~~D~~~~~~~~~~~L~~~G~~~i~~i~~  126 (271)
T d1jyea_          95 I----NSIIFSHEDGTRLGVEHLVALGHQQIALLAG  126 (271)
T ss_dssp             S----CEEEECHHHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred             C----Cccccchhhccccceeeeecccccccccccc
Confidence            1    1112234556777788888888889998874

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=88.54  E-value=0.2  Score=39.35  Aligned_cols=34  Identities=21%  Similarity=0.356  Sum_probs=28.9

Q ss_pred             cEEEEEcCCChhHHHH-----HHHHHhCCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHA-----ALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~l-----a~~L~~~G~~V~~~~r~~  104 (267)
                      ++|+|+.|-||+|+.+     |..|+++|++|.++|-.+
T Consensus        20 ~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp   58 (279)
T d1ihua2          20 HGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDP   58 (279)
T ss_dssp             CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            6777777799999976     688999999999999653

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.40  E-value=0.26  Score=39.29  Aligned_cols=31  Identities=29%  Similarity=0.404  Sum_probs=27.4

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      |+|.| +|--|...|.+|+++|++|+++.++.
T Consensus         2 ViVIG-aG~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVG-GGISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEEC-CBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEEC-CCHHHHHHHHHHHhCCCCEEEEecCC
Confidence            67888 68999999999999999999998643

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=88.13  E-value=0.22  Score=37.10  Aligned_cols=30  Identities=40%  Similarity=0.594  Sum_probs=24.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      +|.|.| .|++|..+|..| ++|++|++.|.+
T Consensus         2 kI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din   31 (196)
T d1dlja2           2 KIAVAG-SGYVGLSLGVLL-SLQNEVTIVDIL   31 (196)
T ss_dssp             EEEEEC-CSHHHHHHHHHH-TTTSEEEEECSC
T ss_pred             EEEEEC-CChhHHHHHHHH-HCCCcEEEEECC
Confidence            456666 899999999766 579999999853

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=87.96  E-value=0.86  Score=33.20  Aligned_cols=72  Identities=13%  Similarity=0.075  Sum_probs=41.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      .++.|.| +|.+|+..++.|... +.+|+.+.-  ++.+.+.+..++. ..+....++       ++++++++...+|++
T Consensus         2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d--~~~~~~~~~~~~~-~~~~~~~~~-------~~~~~ll~~~~iD~v   70 (184)
T d1ydwa1           2 IRIGVMG-CADIARKVSRAIHLAPNATISGVAS--RSLEKAKAFATAN-NYPESTKIH-------GSYESLLEDPEIDAL   70 (184)
T ss_dssp             EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEEC--SSHHHHHHHHHHT-TCCTTCEEE-------SSHHHHHHCTTCCEE
T ss_pred             eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEe--CCccccccchhcc-ccccceeec-------CcHHHhhhcccccee
Confidence            3677888 688999999998776 678876541  3333333222222 112222221       335566666678998


Q ss_pred             EEcc
Q 024488          150 MHFA  153 (267)
Q Consensus       150 i~~A  153 (267)
                      +-+.
T Consensus        71 ~I~t   74 (184)
T d1ydwa1          71 YVPL   74 (184)
T ss_dssp             EECC
T ss_pred             eecc
Confidence            8653

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=87.50  E-value=1.4  Score=31.17  Aligned_cols=30  Identities=20%  Similarity=0.175  Sum_probs=24.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      +|-+.| .|-+|..+|+.|++.|+.|+ ..|.
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~~~~-~~~~   31 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFPTLV-WNRT   31 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSCEEE-ECSS
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCCEEE-EeCC
Confidence            466777 69999999999999998764 5543

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=87.31  E-value=0.23  Score=37.15  Aligned_cols=31  Identities=19%  Similarity=0.198  Sum_probs=26.7

Q ss_pred             cEEEEEcCCChhHHH-----HHHHHHhCCCeEEEEe
Q 024488           71 THVLVTGGAGYIGSH-----AALRLLKDSYRVTIVD  101 (267)
Q Consensus        71 k~vlVTGasggIG~~-----la~~L~~~G~~V~~~~  101 (267)
                      |+++|||-..|+|+-     ||..|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            899999966699985     5688999999999986

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=87.12  E-value=0.33  Score=38.75  Aligned_cols=31  Identities=23%  Similarity=0.407  Sum_probs=21.8

Q ss_pred             cEEEEEcC-CChh---HHHHHHHHHhCCCeEEEEe
Q 024488           71 THVLVTGG-AGYI---GSHAALRLLKDSYRVTIVD  101 (267)
Q Consensus        71 k~vlVTGa-sggI---G~~la~~L~~~G~~V~~~~  101 (267)
                      |+|+|++| |||=   ..+|+++|.++||+|..++
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~   35 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLG   35 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEE
Confidence            45666654 4322   3358899999999999876

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=87.11  E-value=0.3  Score=39.77  Aligned_cols=30  Identities=27%  Similarity=0.379  Sum_probs=27.4

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      |+|.| ||.-|..+|.+|++.|++|+++.+-
T Consensus         5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEeC-cCHHHHHHHHHHHHCcCeEEEEecC
Confidence            78888 8999999999999999999999863

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.95  E-value=0.32  Score=36.83  Aligned_cols=33  Identities=21%  Similarity=0.251  Sum_probs=28.2

Q ss_pred             cEEEEEcCCChhHHH-----HHHHHHhCCCeEEEEecC
Q 024488           71 THVLVTGGAGYIGSH-----AALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        71 k~vlVTGasggIG~~-----la~~L~~~G~~V~~~~r~  103 (267)
                      |+|.|+|+-||.|+.     +|..|++.|.+|.++|-.
T Consensus         3 ~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           3 RIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             eEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            789999999999985     557788999999999843

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=86.93  E-value=0.34  Score=35.35  Aligned_cols=119  Identities=14%  Similarity=0.075  Sum_probs=57.9

Q ss_pred             cEEEEEcC-CChhHHHHHHHHHhCC----CeEEEEecCCCCC-cchhhhhh-hcC-CCCCceEEEEccCCCHHHHHHHhh
Q 024488           71 THVLVTGG-AGYIGSHAALRLLKDS----YRVTIVDNLSRGN-IGAVKVLQ-ELF-PEPGRLQFIYADLGDAKAVNKFFS  142 (267)
Q Consensus        71 k~vlVTGa-sggIG~~la~~L~~~G----~~V~~~~r~~~~~-~~~~~~~~-~~~-~~~~~~~~~~~Dl~d~~~v~~~~~  142 (267)
                      ++|.|.|| |.|.+..++.-++...    -+++++|..+... .+..+... ... ..+.....  ..-+|.   .+.++
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~--~~~td~---~~al~   76 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEI--HLTLDR---RRALD   76 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEE--EEESCH---HHHHT
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCcee--eecCCc---hhhcC
Confidence            46667775 5566666665555432    4888888543210 11111111 100 11112222  122343   23344


Q ss_pred             cCCCCEEEEccccCCcCC---------------Cc-cCh--HHHHHHhHHHHHHHHHHHHHcCCCEEEEEec
Q 024488          143 ENAFDAVMHFAAVAYVGE---------------ST-LDP--LKYYHNITSNTLVVLESMARHGVDTLIYSST  196 (267)
Q Consensus       143 ~~~~D~li~~Ag~~~~~~---------------~~-~~~--~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS  196 (267)
                        +.|+||+.|++...+.               .+ ..+  ......|+...+.+.+.+.+.....++.+-|
T Consensus        77 --gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~vt  146 (169)
T d1s6ya1          77 --GADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFT  146 (169)
T ss_dssp             --TCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             --CCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEeC
Confidence              7799999998753210               00 000  1112345556777888888877655554444

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.70  E-value=0.43  Score=33.31  Aligned_cols=33  Identities=21%  Similarity=0.232  Sum_probs=27.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHH----hCCCeEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLL----KDSYRVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~----~~G~~V~~~~r~~  104 (267)
                      ++++|.| +|++|.++|..|+    +.|.+|+++.+..
T Consensus        38 k~i~IvG-gG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          38 KSITIIG-GGFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            7888888 5999999998885    3589999988644

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=86.59  E-value=0.36  Score=38.27  Aligned_cols=31  Identities=26%  Similarity=0.413  Sum_probs=28.1

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      |+|.| +|..|...|.+|+++|++|+++.+..
T Consensus        19 VlVIG-~G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVG-SGGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEecCC
Confidence            88999 79999999999999999999998643

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=86.30  E-value=0.054  Score=41.41  Aligned_cols=26  Identities=38%  Similarity=0.469  Sum_probs=22.5

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRV   97 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V   97 (267)
                      ++|+|.| +|-+|..+|.+|+++|++|
T Consensus         1 mkV~VIG-aGi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIG-AGVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCCCCc
Confidence            3588888 6999999999999999854

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=86.17  E-value=0.43  Score=36.37  Aligned_cols=31  Identities=29%  Similarity=0.392  Sum_probs=27.6

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      |+|.| +|-.|...|.+|+++|++|+++++..
T Consensus         5 ViIIG-aG~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           5 VIVIG-GGPSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            78888 58999999999999999999998654

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=86.10  E-value=1.3  Score=30.34  Aligned_cols=95  Identities=7%  Similarity=0.023  Sum_probs=55.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHh-CCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      .+|+|-| +|.+|+++++.+.. .|++++++--.  +.....+   .+    .++..+     +.++++++.+. .+++.
T Consensus         4 ~~v~I~G-aG~~G~~l~~~l~~~~~~~iv~fiDd--d~~k~G~---~I----~Gi~V~-----~~~~l~~~~~~-~i~ia   67 (126)
T d2dt5a2           4 WGLCIVG-MGRLGSALADYPGFGESFELRGFFDV--DPEKVGR---PV----RGGVIE-----HVDLLPQRVPG-RIEIA   67 (126)
T ss_dssp             EEEEEEC-CSHHHHHHHHCSCCCSSEEEEEEEES--CTTTTTC---EE----TTEEEE-----EGGGHHHHSTT-TCCEE
T ss_pred             ceEEEEc-CCHHHHHHHHhHhhcCCcEEEEEEeC--chHhcCC---EE----CCEEEe-----cHHHHHHHHhh-cccEE
Confidence            4789999 69999999987653 47888887532  1111111   11    133333     23445666653 56665


Q ss_pred             EEccccCCcCCCccChHHHHHHhHHHHHHHHHHHHHcCCCEEEEEecccc
Q 024488          150 MHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCAT  199 (267)
Q Consensus       150 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~vSS~~~  199 (267)
                      +-+..           .       ...+.+.+.|.+.+.+.|..++....
T Consensus        68 i~~i~-----------~-------~~~~~I~d~l~~~gIk~I~~f~~~~l   99 (126)
T d2dt5a2          68 LLTVP-----------R-------EAAQKAADLLVAAGIKGILNFAPVVL   99 (126)
T ss_dssp             EECSC-----------H-------HHHHHHHHHHHHHTCCEEEECSSSCC
T ss_pred             EEeCC-----------H-------HHHHHHHHHHHHcCCCEEeecCceee
Confidence            54432           1       12345677778888888888766443

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=86.03  E-value=0.43  Score=34.55  Aligned_cols=33  Identities=24%  Similarity=0.199  Sum_probs=30.2

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      +|+++|.| =|.+|+.+|+.|...|++|+++...
T Consensus        23 Gk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~D   55 (163)
T d1v8ba1          23 GKIVVICG-YGDVGKGCASSMKGLGARVYITEID   55 (163)
T ss_dssp             TSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSC
T ss_pred             CCEEEEec-ccccchhHHHHHHhCCCEEEEEecC
Confidence            49999998 8999999999999999999998853

>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Azotobacter vinelandii [TaxId: 354]

Probab=85.95  E-value=0.31  Score=38.50  Aligned_cols=34  Identities=24%  Similarity=0.256  Sum_probs=28.8

Q ss_pred             CcEEEEEcCCChhHHH-----HHHHHHhCCCeEEEEecCC
Q 024488           70 VTHVLVTGGAGYIGSH-----AALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        70 ~k~vlVTGasggIG~~-----la~~L~~~G~~V~~~~r~~  104 (267)
                      ||+|.|.| -||+|+-     +|..|++.|++|.++|-.+
T Consensus         2 Mr~Iaisg-KGGVGKTT~a~NLA~~LA~~G~rVLlID~Dp   40 (289)
T d2afhe1           2 MRQCAIYG-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDP   40 (289)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             ccEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEecCC
Confidence            78899987 8999986     5778999999999999643

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=85.70  E-value=0.54  Score=33.42  Aligned_cols=31  Identities=32%  Similarity=0.503  Sum_probs=25.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      +|+|.| +|.+|.++|..|. ++.+|+++.+.+
T Consensus         2 rVvIIG-gG~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVG-NGPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEEC-CcHHHHHHHHHHH-cCCCEEEEeccc
Confidence            678888 6899999999986 478999998643

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=85.45  E-value=0.37  Score=40.85  Aligned_cols=32  Identities=13%  Similarity=0.149  Sum_probs=25.2

Q ss_pred             CcEEEEEcC------CChhH---HHHHHHHHhCCCeEEEEe
Q 024488           70 VTHVLVTGG------AGYIG---SHAALRLLKDSYRVTIVD  101 (267)
Q Consensus        70 ~k~vlVTGa------sggIG---~~la~~L~~~G~~V~~~~  101 (267)
                      ||.+.||.=      +||+|   .+|+++|+++||+|.++.
T Consensus         1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~   41 (477)
T d1rzua_           1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLI   41 (477)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEe
Confidence            566667653      58888   667899999999999874

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.26  E-value=2.2  Score=31.83  Aligned_cols=84  Identities=13%  Similarity=0.174  Sum_probs=52.8

Q ss_pred             CcEEEEEcCCChhHHHHH----HHHHhC-----CCeEEEEecCCCCCcchhhhhhhcCCC-----------CCceEEEEc
Q 024488           70 VTHVLVTGGAGYIGSHAA----LRLLKD-----SYRVTIVDNLSRGNIGAVKVLQELFPE-----------PGRLQFIYA  129 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la----~~L~~~-----G~~V~~~~r~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~  129 (267)
                      .-+++|.||||-+-+.-.    -+|...     +.+|+.++|..-+.++..+.+.+....           -..+.++.+
T Consensus        20 ~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~~   99 (203)
T d1qkia1          20 THIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAG   99 (203)
T ss_dssp             CEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCBC
T ss_pred             CcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhccccC
Confidence            368999999999876433    123344     458999998765554443333222111           136788899


Q ss_pred             cCCCHHHHHHHhhc-------CCCCEEEEcc
Q 024488          130 DLGDAKAVNKFFSE-------NAFDAVMHFA  153 (267)
Q Consensus       130 Dl~d~~~v~~~~~~-------~~~D~li~~A  153 (267)
                      |++|.++++++-+.       .....++..|
T Consensus       100 d~~~~~~~~~L~~~l~~~~~~~~~~rifYLA  130 (203)
T d1qkia1         100 QYDDAASYQRLNSHMNALHLGSQANRLFYLA  130 (203)
T ss_dssp             CTTCHHHHHHHHHHHHHTTTTTTSEEEEEEC
T ss_pred             cCCChhhHHHHHHHHHHHhcCCCcceEEEEe
Confidence            99999987776442       1334677776

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=85.12  E-value=0.37  Score=34.85  Aligned_cols=76  Identities=14%  Similarity=0.112  Sum_probs=38.5

Q ss_pred             cEEEEEcCCChhHHHHHHH-HHh-C----CCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcC
Q 024488           71 THVLVTGGAGYIGSHAALR-LLK-D----SYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSEN  144 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~-L~~-~----G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~  144 (267)
                      +||.|.|| |.+|...+-. ++. .    +.++++.|.++...+...+.........  ... ... ++.   .+.++  
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~--~~~-~~t-~~~---~~~l~--   70 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDR--FKV-LIS-DTF---EGAVV--   70 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTS--SEE-EEC-SSH---HHHHT--
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccC--ceE-EEe-cCc---ccccC--
Confidence            35778887 4467666533 222 1    3589999964433222222222222222  222 121 222   23344  


Q ss_pred             CCCEEEEccccC
Q 024488          145 AFDAVMHFAAVA  156 (267)
Q Consensus       145 ~~D~li~~Ag~~  156 (267)
                      +.|+||..||..
T Consensus        71 ~aDvVVita~~~   82 (162)
T d1up7a1          71 DAKYVIFQFRPG   82 (162)
T ss_dssp             TCSEEEECCCTT
T ss_pred             CCCEEEEecccC
Confidence            789999999864

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=85.06  E-value=0.49  Score=38.95  Aligned_cols=23  Identities=13%  Similarity=0.095  Sum_probs=19.3

Q ss_pred             CChhH---HHHHHHHHhCCCeEEEEe
Q 024488           79 AGYIG---SHAALRLLKDSYRVTIVD  101 (267)
Q Consensus        79 sggIG---~~la~~L~~~G~~V~~~~  101 (267)
                      +||+|   .+|+++|+++||+|+++.
T Consensus        15 ~GG~~~~~~~La~~L~~~Gh~V~Vvt   40 (437)
T d2bisa1          15 VGGLAEALTAISEALASLGHEVLVFT   40 (437)
T ss_dssp             SSSHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             cCCHHHHHHHHHHHHHHcCCEEEEEe
Confidence            47887   556899999999999886

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=85.06  E-value=0.36  Score=37.07  Aligned_cols=72  Identities=11%  Similarity=-0.009  Sum_probs=47.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      ++||=.|.+.|.   ++..|+++|++|+++|.++...+.+.+...   ..+.++.++.+|+.+.+     + ...+|+|+
T Consensus        39 ~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~---~~~~~v~~~~~d~~~~~-----~-~~~fD~i~  106 (246)
T d1y8ca_          39 DDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFR---SQGLKPRLACQDISNLN-----I-NRKFDLIT  106 (246)
T ss_dssp             TEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHH---HTTCCCEEECCCGGGCC-----C-SCCEEEEE
T ss_pred             CeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhcccccc---ccCccceeeccchhhhc-----c-cccccccc
Confidence            789999977664   677888999999999854432222222222   22447889999887542     1 23789988


Q ss_pred             Eccc
Q 024488          151 HFAA  154 (267)
Q Consensus       151 ~~Ag  154 (267)
                      ...+
T Consensus       107 ~~~~  110 (246)
T d1y8ca_         107 CCLD  110 (246)
T ss_dssp             ECTT
T ss_pred             eeee
Confidence            6543

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=85.02  E-value=2.3  Score=29.62  Aligned_cols=31  Identities=19%  Similarity=0.248  Sum_probs=28.7

Q ss_pred             cEEEEEcCC---ChhHHHHHHHHHhCCCeEEEEe
Q 024488           71 THVLVTGGA---GYIGSHAALRLLKDSYRVTIVD  101 (267)
Q Consensus        71 k~vlVTGas---ggIG~~la~~L~~~G~~V~~~~  101 (267)
                      |+|.|.|+|   +-.|..+++.|.+.||+|+.+.
T Consensus        20 ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVn   53 (139)
T d2d59a1          20 KKIALVGASPKPERDANIVMKYLLEHGYDVYPVN   53 (139)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred             CeEEEEeecCCCCCchHHHHHHHHHCCCEEEEEC
Confidence            889999999   6899999999999999998876

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=84.97  E-value=0.75  Score=32.99  Aligned_cols=30  Identities=20%  Similarity=0.424  Sum_probs=20.8

Q ss_pred             cEEEEEcCCChhHHHHHHHHHh-C-CCeEEEEe
Q 024488           71 THVLVTGGAGYIGSHAALRLLK-D-SYRVTIVD  101 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~-~-G~~V~~~~  101 (267)
                      .++.|.| +|+||..+...+++ . ..+++++.
T Consensus         5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~ava   36 (157)
T d1nvmb1           5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMV   36 (157)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEE
T ss_pred             cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEE
Confidence            5788889 99999976544443 3 45777764

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=84.94  E-value=0.89  Score=36.47  Aligned_cols=77  Identities=17%  Similarity=0.071  Sum_probs=44.5

Q ss_pred             cEEE-EEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhc-CCCCE
Q 024488           71 THVL-VTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSE-NAFDA  148 (267)
Q Consensus        71 k~vl-VTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-~~~D~  148 (267)
                      ++|| +..++|+++.+    +++.|++|+.++.+....+.+.+..+.-.-....+.++..|+.+.  ++...+. .++|+
T Consensus       134 ~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~~~--l~~~~~~~~~fD~  207 (309)
T d2igta1         134 LKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKF--IQREERRGSTYDI  207 (309)
T ss_dssp             CEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHH--HHHHHHHTCCBSE
T ss_pred             CeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHHHh--HHHHhhcCCCCCE
Confidence            5555 55566666554    456799999998544333333332222111233688898887543  4444433 47899


Q ss_pred             EEEcc
Q 024488          149 VMHFA  153 (267)
Q Consensus       149 li~~A  153 (267)
                      ||...
T Consensus       208 IilDP  212 (309)
T d2igta1         208 ILTDP  212 (309)
T ss_dssp             EEECC
T ss_pred             EEECC
Confidence            99863

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.75  E-value=0.72  Score=35.33  Aligned_cols=33  Identities=33%  Similarity=0.521  Sum_probs=28.2

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS  104 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~-~V~~~~r~~  104 (267)
                      .+|+|.| +|--|..+|..|.+.|. +|+++.+.+
T Consensus         2 ~~V~IvG-aG~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           2 IDILIAG-AGIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            4788988 68999999999999995 898888643

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.62  E-value=1.6  Score=32.54  Aligned_cols=77  Identities=12%  Similarity=-0.007  Sum_probs=42.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC---CcchhhhhhhcCCCCCce----EEEEccCCCHHHHHHHhhcC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NIGAVKVLQELFPEPGRL----QFIYADLGDAKAVNKFFSEN  144 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~----~~~~~Dl~d~~~v~~~~~~~  144 (267)
                      +|++.| ++..|..+.+.|.+.|++|+++.-.+.+   ...+.+...+.   +-.+    ....-+..+.+.++. ++..
T Consensus         2 kI~~~G-~~~~~~~~l~~L~~~~~~i~~V~t~p~~~~~~~~v~~~a~~~---~ipv~~~~~~~~~~~~~~~~~~~-l~~~   76 (203)
T d2bw0a2           2 KIAVIG-QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKD---GVPVFKYSRWRAKGQALPDVVAK-YQAL   76 (203)
T ss_dssp             EEEEEC-CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHH---TCCEEECSCCEETTEECHHHHHH-HHTT
T ss_pred             EEEEEc-CCHHHHHHHHHHHHCCCcEEEEEcCCCcCcCCChhhhhHHhc---CCcccccccccccccccHHHHHH-HHHh
Confidence            455666 6789999999999999999876522211   11122221221   1111    112234445555544 4445


Q ss_pred             CCCEEEEcc
Q 024488          145 AFDAVMHFA  153 (267)
Q Consensus       145 ~~D~li~~A  153 (267)
                      ++|++|...
T Consensus        77 ~~Dliv~~~   85 (203)
T d2bw0a2          77 GAELNVLPF   85 (203)
T ss_dssp             CCSEEEESS
T ss_pred             CCCceEEee
Confidence            789988764

>d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Hypothetical protein YfdW
species: Escherichia coli [TaxId: 562]

Probab=83.59  E-value=9  Score=31.20  Aligned_cols=85  Identities=14%  Similarity=0.012  Sum_probs=48.7

Q ss_pred             CCCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhh---h-----cCCCCCceEEEEccCCCHHHH
Q 024488           66 HEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQ---E-----LFPEPGRLQFIYADLGDAKAV  137 (267)
Q Consensus        66 ~~~~~k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~-----~~~~~~~~~~~~~Dl~d~~~v  137 (267)
                      ++.+ -+||=.+ ...-|-...+.|++.|++|+-+.+-... +.......   .     ....+.+=.-+..|+.+++..
T Consensus         4 PL~G-irVld~~-~~~agp~~~~~Lad~GAeVIkvE~p~~g-d~~R~~~~~~~~~~s~~~~~~nr~K~si~lDL~~~~g~   80 (417)
T d1q7ea_           4 PLQG-IKVLDFT-GVQSGPSCTQMLAWFGADVIKIERPGVG-DVTRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGK   80 (417)
T ss_dssp             TTTT-CEEEECC-CTTHHHHHHHHHHHTTCEEEEEECTTTC-CGGGTTTCSSTTSCCHHHHTTCTTCEEEECCTTSHHHH
T ss_pred             CCCC-CEEEEcC-ChhHHHHHHHHHHHhCCeEEEECCCCCC-CchhccCCCCCCCccHHHHHhCCCCeEEEEeCcCHHHH
Confidence            3455 3343222 3456778888999999999998742111 00000000   0     001122334678999987654


Q ss_pred             ---HHHhhcCCCCEEEEcccc
Q 024488          138 ---NKFFSENAFDAVMHFAAV  155 (267)
Q Consensus       138 ---~~~~~~~~~D~li~~Ag~  155 (267)
                         .++++  +.|+||+|--.
T Consensus        81 ~~~~~Li~--~aDv~i~n~~p   99 (417)
T d1q7ea_          81 EVMEKLIR--EADILVENFHP   99 (417)
T ss_dssp             HHHHHHHH--HCSEEEECCCC
T ss_pred             HHHHHHHh--cCcccEeccCC
Confidence               46666  78999999643

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=83.48  E-value=0.69  Score=34.01  Aligned_cols=32  Identities=22%  Similarity=0.186  Sum_probs=25.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhC--CCeEEEEecC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNL  103 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~--G~~V~~~~r~  103 (267)
                      |+|+|.| +|.+|.++|..|.+.  +.+|+++.+.
T Consensus         1 ~KVvIIG-gG~~G~e~A~~l~~~~~~~~V~v~~~~   34 (198)
T d1nhpa1           1 MKVIVLG-SSHGGYEAVEELLNLHPDAEIQWYEKG   34 (198)
T ss_dssp             CEEEEEC-SSHHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence            4577888 579999999999886  4688888764

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=83.34  E-value=0.27  Score=35.86  Aligned_cols=31  Identities=26%  Similarity=0.268  Sum_probs=25.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r  102 (267)
                      .+|+|.| +|.+|.++|..|.+.|.++.++.+
T Consensus         4 a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~   34 (183)
T d1d7ya1           4 APVVVLG-AGLASVSFVAELRQAGYQGLITVV   34 (183)
T ss_dssp             SSEEEEC-CSHHHHHHHHHHHHHTCCSCEEEE
T ss_pred             CCEEEEC-ccHHHHHHHHHHHhcCCceEEEEE
Confidence            4588888 799999999999999976655543

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=83.15  E-value=0.55  Score=38.16  Aligned_cols=29  Identities=45%  Similarity=0.625  Sum_probs=26.6

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDN  102 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~~V~~~~r  102 (267)
                      |+|.| +|.-|..+|.+|++.|++|+++.+
T Consensus        10 vIVVG-sG~aG~v~A~rLaeaG~~VlvLEa   38 (370)
T d3coxa1          10 ALVIG-SGYGGAVAALRLTQAGIPTQIVEM   38 (370)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCeEEEEeC
Confidence            78888 789999999999999999999985

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=82.87  E-value=0.61  Score=37.20  Aligned_cols=31  Identities=23%  Similarity=0.362  Sum_probs=27.8

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      |+|.| +|..|...|.+|+++|++|+++.+..
T Consensus        26 VvVIG-~G~aGl~aA~~la~~G~~V~llEk~~   56 (322)
T d1d4ca2          26 VVIIG-SGGAGLAAAVSARDAGAKVILLEKEP   56 (322)
T ss_dssp             EEEEC-SSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            88888 78999999999999999999998643

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=82.15  E-value=1.3  Score=32.42  Aligned_cols=31  Identities=29%  Similarity=0.433  Sum_probs=25.6

Q ss_pred             CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEEe
Q 024488           70 VTHVLVTGGAGYIGSHAALRLLKDS-YRVTIVD  101 (267)
Q Consensus        70 ~k~vlVTGasggIG~~la~~L~~~G-~~V~~~~  101 (267)
                      |-+|.|-| .|-||+.+++.+.+++ .+|+.+.
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~dievVaIn   32 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVA   32 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEE
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEE
Confidence            45788888 8999999999999874 6777765

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=82.11  E-value=0.79  Score=36.47  Aligned_cols=32  Identities=34%  Similarity=0.490  Sum_probs=28.6

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      -.|+|.| +|.-|..+|.+|.++|.+|+++++.
T Consensus         8 ~dV~IIG-AG~sGl~~a~~L~~~G~~v~i~Ek~   39 (298)
T d1w4xa1           8 VDVLVVG-AGFSGLYALYRLRELGRSVHVIETA   39 (298)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CCEEEEC-ccHHHHHHHHHHHhCCCCEEEEEcC
Confidence            4588999 6899999999999999999999864

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=82.02  E-value=0.7  Score=37.19  Aligned_cols=30  Identities=33%  Similarity=0.531  Sum_probs=26.9

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNL  103 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~~V~~~~r~  103 (267)
                      |+|.| ||.-|..+|.+|++.|++|+++.+-
T Consensus         7 viIVG-sG~aG~v~A~~La~~G~kVlvLEaG   36 (379)
T d2f5va1           7 VVIVG-SGPIGCTYARELVGAGYKVAMFDIG   36 (379)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHhhCCCeEEEEecC
Confidence            78888 7888999999999999999999753

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=81.84  E-value=0.85  Score=34.95  Aligned_cols=32  Identities=34%  Similarity=0.388  Sum_probs=28.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           72 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        72 ~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      -|+|.| +|--|...|.+|+++|++|.++.+..
T Consensus         6 DViIIG-aG~aGl~aA~~la~~G~~V~vlEk~~   37 (253)
T d2gqfa1           6 ENIIIG-AGAAGLFCAAQLAKLGKSVTVFDNGK   37 (253)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             cEEEEC-cCHHHHHHHHHHHHCCCcEEEEecCC
Confidence            388888 68999999999999999999999754

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=81.76  E-value=3  Score=32.11  Aligned_cols=70  Identities=19%  Similarity=0.033  Sum_probs=44.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      ++||=.|...|+   ++..+++.|++|+.+|.++...+.+.+..+   .++-...++.+|+.      ..+..+.+|+|+
T Consensus       122 ~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~---~n~~~~~~~~~d~~------~~~~~~~fD~V~  189 (254)
T d2nxca1         122 DKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAK---RNGVRPRFLEGSLE------AALPFGPFDLLV  189 (254)
T ss_dssp             CEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHH---HTTCCCEEEESCHH------HHGGGCCEEEEE
T ss_pred             CEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHH---HcCCceeEEecccc------ccccccccchhh
Confidence            789988876664   445677789999999965544433333322   23345677777653      223345789998


Q ss_pred             Ec
Q 024488          151 HF  152 (267)
Q Consensus       151 ~~  152 (267)
                      .|
T Consensus       190 an  191 (254)
T d2nxca1         190 AN  191 (254)
T ss_dssp             EE
T ss_pred             hc
Confidence            76

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=81.34  E-value=1.5  Score=34.34  Aligned_cols=77  Identities=16%  Similarity=0.059  Sum_probs=44.9

Q ss_pred             cEEE-EEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           71 THVL-VTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vl-VTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      ++++ +.+|||.|+..+++   ..+++|++++.++...+-+.+..++. .....+.+...|+.+..  ...  .+++|+|
T Consensus       112 ~~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~-~~~~~~~i~~~~~~~~~--~~~--~~~fDlI  183 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERH-GVSDRFFVRKGEFLEPF--KEK--FASIEMI  183 (271)
T ss_dssp             CEEEEESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHT-TCTTSEEEEESSTTGGG--GGG--TTTCCEE
T ss_pred             cEEEEeeeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHc-CCCceeEEeeccccccc--ccc--cCcccEE
Confidence            3455 55556666666553   35789999996554333333333332 22346777888886542  111  1478999


Q ss_pred             EEcccc
Q 024488          150 MHFAAV  155 (267)
Q Consensus       150 i~~Ag~  155 (267)
                      |.|--.
T Consensus       184 VsNPPY  189 (271)
T d1nv8a_         184 LSNPPY  189 (271)
T ss_dssp             EECCCC
T ss_pred             EEcccc
Confidence            999643

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=81.33  E-value=6.8  Score=27.42  Aligned_cols=77  Identities=14%  Similarity=0.152  Sum_probs=45.4

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCC---CHHHHHHHhh----c
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLG---DAKAVNKFFS----E  143 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---d~~~v~~~~~----~  143 (267)
                      +++.|.+.|||.|--++..+.+.|-++--+      .++..+.+++....... .-=++|++   +.+.+.++++    .
T Consensus         4 ~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l------~~~t~~~L~~~lp~~~~-~~NPlD~~~~~~~~~~~~~l~~~~~d   76 (163)
T d2csua3           4 NKVAIMTNAGGPGVLTADELDKRGLKLATL------EEKTIEELRSFLPPMAA-VKNPVDMIASARGEDYYRTAKLLLQD   76 (163)
T ss_dssp             SEEEEEESCHHHHHHHHHHHHTTTCEECCC------CHHHHHHHHHHSCTTCE-ESSEEECCTTCCHHHHHHHHHHHHHS
T ss_pred             CeEEEEECChHHHHHHHHHHHHcCCccCCC------CHHHHHHHHHhCCCccc-CCCcccccCCCCHHHHHHHHHHHHcC
Confidence            677777789999999999999999777432      23334444444322110 00123432   4555555444    4


Q ss_pred             CCCCEEEEccc
Q 024488          144 NAFDAVMHFAA  154 (267)
Q Consensus       144 ~~~D~li~~Ag  154 (267)
                      ..+|.++....
T Consensus        77 ~~vd~v~v~~~   87 (163)
T d2csua3          77 PNVDMLIAICV   87 (163)
T ss_dssp             TTCSEEEEEEE
T ss_pred             CCcCEEEEeec
Confidence            78898765443

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=81.19  E-value=1.5  Score=32.06  Aligned_cols=73  Identities=15%  Similarity=0.168  Sum_probs=43.2

Q ss_pred             cEEEEEcC-CChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEE
Q 024488           71 THVLVTGG-AGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAV  149 (267)
Q Consensus        71 k~vlVTGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~l  149 (267)
                      ++||=.|+ +|.+    +..+++.+.+|++++.++...+.+.+.++...-....+.++.+|+.+.      +....+|+|
T Consensus        54 ~~VLDiGcG~G~~----~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~------~~~~~fD~I  123 (194)
T d1dusa_          54 DDILDLGCGYGVI----GIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN------VKDRKYNKI  123 (194)
T ss_dssp             CEEEEETCTTSHH----HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT------CTTSCEEEE
T ss_pred             CeEEEEeecCChh----HHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhh------hccCCceEE
Confidence            66776664 4444    445666788999998654333333333322212234688899998642      223478999


Q ss_pred             EEcc
Q 024488          150 MHFA  153 (267)
Q Consensus       150 i~~A  153 (267)
                      +.|.
T Consensus       124 i~~~  127 (194)
T d1dusa_         124 ITNP  127 (194)
T ss_dssp             EECC
T ss_pred             EEcc
Confidence            9874

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=80.97  E-value=1.4  Score=32.82  Aligned_cols=82  Identities=16%  Similarity=0.075  Sum_probs=45.9

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhh-----hhhhcCCCCCceEEEEccCCCHHHHHHHhhcCC
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVK-----VLQELFPEPGRLQFIYADLGDAKAVNKFFSENA  145 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  145 (267)
                      ++|++.| ++-.+..+.+.|.+.|++|..+.-.+.......+     ...... ....+.....+..+.+...+.++..+
T Consensus         4 mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (206)
T d1fmta2           4 LRIIFAG-TPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLA-EEKGLPVFQPVSLRPQENQQLVAELQ   81 (206)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHH-HHTTCCEECCSCSCSHHHHHHHHHTT
T ss_pred             cEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhh-hccCccccccccccchhhHHHHhhhc
Confidence            4566776 5778999999999999998776532211111000     000000 01234455555545555566666668


Q ss_pred             CCEEEEccc
Q 024488          146 FDAVMHFAA  154 (267)
Q Consensus       146 ~D~li~~Ag  154 (267)
                      +|++|....
T Consensus        82 ~d~~v~~~~   90 (206)
T d1fmta2          82 ADVMVVVAY   90 (206)
T ss_dssp             CSEEEEESC
T ss_pred             ceEEEeecc
Confidence            898776543

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=80.87  E-value=0.67  Score=36.96  Aligned_cols=31  Identities=42%  Similarity=0.511  Sum_probs=27.9

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 024488           73 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS  104 (267)
Q Consensus        73 vlVTGasggIG~~la~~L~~~G~~V~~~~r~~  104 (267)
                      |+|.| +|..|...|.+++++|.+|+++.+..
T Consensus        22 VvVIG-aG~aGl~AA~~aa~~G~~V~vlEK~~   52 (317)
T d1qo8a2          22 VLVVG-AGSAGFNASLAAKKAGANVILVDKAP   52 (317)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            88888 79999999999999999999998643

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=80.73  E-value=0.98  Score=33.51  Aligned_cols=74  Identities=19%  Similarity=0.157  Sum_probs=46.3

Q ss_pred             cEEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHHHHHhhcCCCCEEE
Q 024488           71 THVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAVNKFFSENAFDAVM  150 (267)
Q Consensus        71 k~vlVTGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~D~li  150 (267)
                      .+||=.|++.|.   ++..|++.|++|+++|.+....+.+.+...+   .+..+.++..|..+..     +.....|+|+
T Consensus        39 ~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~---~~~~~~~~~~d~~~l~-----~~~~~fD~I~  107 (226)
T d1ve3a1          39 GKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKS---RESNVEFIVGDARKLS-----FEDKTFDYVI  107 (226)
T ss_dssp             CEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---TTCCCEEEECCTTSCC-----SCTTCEEEEE
T ss_pred             CEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcc---cccccccccccccccc-----ccCcCceEEE
Confidence            578888876654   5678888999999999643322222222222   2345777888877642     2224689988


Q ss_pred             Ecccc
Q 024488          151 HFAAV  155 (267)
Q Consensus       151 ~~Ag~  155 (267)
                      .+...
T Consensus       108 ~~~~l  112 (226)
T d1ve3a1         108 FIDSI  112 (226)
T ss_dssp             EESCG
T ss_pred             Eecch
Confidence            77543

>d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: 2-methylacyl-CoA racemase Mcr
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.37  E-value=5.3  Score=32.01  Aligned_cols=67  Identities=21%  Similarity=0.128  Sum_probs=41.4

Q ss_pred             ChhHHHHHHHHHhCCCeEEEEecCCCCCcchhhhhhhcCCCCCceEEEEccCCCHHHH---HHHhhcCCCCEEEEccc
Q 024488           80 GYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQELFPEPGRLQFIYADLGDAKAV---NKFFSENAFDAVMHFAA  154 (267)
Q Consensus        80 ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v---~~~~~~~~~D~li~~Ag  154 (267)
                      ..-|-...+.|++.|++|+-+.+-.. .+...   ...  .+.+=.-+..|+.+++..   .++++  +.|+||+|-.
T Consensus        15 ~~agp~~~~~lad~GA~VikvE~p~~-~~~~~---~~~--~nr~K~si~lDl~~~~g~~~~~~Lv~--~aDv~i~n~~   84 (359)
T d1x74a1          15 IGPGPHAAMILGDLGADVVRIDRPSS-VDGIS---RDA--MLRNRRIVTADLKSDQGLELALKLIA--KADVLIEGYR   84 (359)
T ss_dssp             STHHHHHHHHHHHTTCEEEEEECC------CC---CCG--GGCSCEEEECCTTSHHHHHHHHHHHT--TCSEEEECSC
T ss_pred             chHHHHHHHHHHHhCCEEEEECCCCC-CCchh---hhh--hhCCCeEEEEeCcCHHHHHHHHHHHh--hCCEEEecCC
Confidence            45577778889999999998874211 11110   000  012234578899987754   44555  8899999964