BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024489
(267 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase
Length = 264
Score = 295 bits (756), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 145/240 (60%), Positives = 172/240 (71%), Gaps = 1/240 (0%)
Query: 7 IDAEYLKEIEKAXXXXXXXXXXXXCAPIMLRLAWHDAGTYDAKTRTGGPDGSIRHEQEYA 66
+ A+Y K +EKA CAP+MLRLAWH AGT+D T+TGGP G+I+H E A
Sbjct: 19 VSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGTKTGGPFGTIKHPAELA 78
Query: 67 HNANNGLKIAIDLCEGVKAKHPRITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSESPE 126
H+ANNGL IA+ L E +KA+ P ++YAD YQLAGVVAVEVTGGP + F PGR+D E P
Sbjct: 79 HSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPP 138
Query: 127 EGRLPDAAQGVSHLRDIFYR-MGLSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFD 185
EGRLPDA +G HLRD+F + MGL+D+DIVALSGGHT+G AH ERSG+EGPWT PL FD
Sbjct: 139 EGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFD 198
Query: 186 NSYFVXXXXXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGF 245
NSYF P+DKALL DP FR V+ YA DEDAFF DYA +H+KLSELGF
Sbjct: 199 NSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSELGF 258
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With
Ascorbate
pdb|1OAG|A Chain A, Ascorbate Peroxidase From Soybean Cytosol
pdb|1V0H|X Chain X, Ascobate Peroxidase From Soybean Cytosol In Complex With
Salicylhydroxamic Acid
pdb|2GHH|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHK|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
Length = 261
Score = 295 bits (756), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 145/240 (60%), Positives = 172/240 (71%), Gaps = 1/240 (0%)
Query: 7 IDAEYLKEIEKAXXXXXXXXXXXXCAPIMLRLAWHDAGTYDAKTRTGGPDGSIRHEQEYA 66
+ A+Y K +EKA CAP+MLRLAWH AGT+D T+TGGP G+I+H E A
Sbjct: 19 VSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGTKTGGPFGTIKHPAELA 78
Query: 67 HNANNGLKIAIDLCEGVKAKHPRITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSESPE 126
H+ANNGL IA+ L E +KA+ P ++YAD YQLAGVVAVEVTGGP + F PGR+D E P
Sbjct: 79 HSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPP 138
Query: 127 EGRLPDAAQGVSHLRDIFYR-MGLSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFD 185
EGRLPDA +G HLRD+F + MGL+D+DIVALSGGHT+G AH ERSG+EGPWT PL FD
Sbjct: 139 EGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFD 198
Query: 186 NSYFVXXXXXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGF 245
NSYF P+DKALL DP FR V+ YA DEDAFF DYA +H+KLSELGF
Sbjct: 199 NSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSELGF 258
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii
pdb|2XIH|A Chain A, The Structure Of Ascorbate Peroxidase Compound Iii
pdb|2XI6|A Chain A, The Structure Of Ascorbate Peroxidase Compound I
pdb|2XJ6|A Chain A, The Structure Of Ferrous Ascorbate Peroxidase
Length = 249
Score = 295 bits (755), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/240 (60%), Positives = 172/240 (71%), Gaps = 1/240 (0%)
Query: 7 IDAEYLKEIEKAXXXXXXXXXXXXCAPIMLRLAWHDAGTYDAKTRTGGPDGSIRHEQEYA 66
+ A+Y K +EKA CAP+MLRLAWH AGT+D T+TGGP G+I+H E A
Sbjct: 7 VSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGTKTGGPFGTIKHPAELA 66
Query: 67 HNANNGLKIAIDLCEGVKAKHPRITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSESPE 126
H+ANNGL IA+ L E +KA+ P ++YAD YQLAGVVAVEVTGGP + F PGR+D E P
Sbjct: 67 HSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPP 126
Query: 127 EGRLPDAAQGVSHLRDIFYR-MGLSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFD 185
EGRLPDA +G HLRD+F + MGL+D+DIVALSGGHT+G AH ERSG+EGPWT PL FD
Sbjct: 127 EGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFD 186
Query: 186 NSYFVXXXXXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGF 245
NSYF P+DKALL DP FR V+ YA DEDAFF DYA +H+KLSELGF
Sbjct: 187 NSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSELGF 246
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant
Length = 249
Score = 293 bits (751), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 144/240 (60%), Positives = 172/240 (71%), Gaps = 1/240 (0%)
Query: 7 IDAEYLKEIEKAXXXXXXXXXXXXCAPIMLRLAWHDAGTYDAKTRTGGPDGSIRHEQEYA 66
+ A+Y K +EKA CAP+ML+LAWH AGT+D T+TGGP G+I+H E A
Sbjct: 7 VSADYQKAVEKAKKKLRGFIAEKRCAPLMLKLAWHSAGTFDKGTKTGGPFGTIKHPAELA 66
Query: 67 HNANNGLKIAIDLCEGVKAKHPRITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSESPE 126
H+ANNGL IA+ L E +KA+ P ++YAD YQLAGVVAVEVTGGP + F PGR+D E P
Sbjct: 67 HSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPP 126
Query: 127 EGRLPDAAQGVSHLRDIFYR-MGLSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFD 185
EGRLPDA +G HLRD+F + MGL+D+DIVALSGGHT+G AH ERSG+EGPWT PL FD
Sbjct: 127 EGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFD 186
Query: 186 NSYFVXXXXXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGF 245
NSYF P+DKALL DP FR V+ YA DEDAFF DYA +H+KLSELGF
Sbjct: 187 NSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSELGF 246
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant
Length = 261
Score = 292 bits (748), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/240 (60%), Positives = 171/240 (71%), Gaps = 1/240 (0%)
Query: 7 IDAEYLKEIEKAXXXXXXXXXXXXCAPIMLRLAWHDAGTYDAKTRTGGPDGSIRHEQEYA 66
+ A+Y K +EKA CAP+MLRLAWH AGT+D T+TGGP G+I+H E A
Sbjct: 19 VSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGTKTGGPFGTIKHPAELA 78
Query: 67 HNANNGLKIAIDLCEGVKAKHPRITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSESPE 126
H+ANNGL IA+ L E +KA+ P ++YAD YQLAGVVAVEVTGGP + F PGR+D E P
Sbjct: 79 HSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPP 138
Query: 127 EGRLPDAAQGVSHLRDIFYR-MGLSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFD 185
EGRLPDA +G HLRD+F + MGL+D+DIVALSGGHT+G AH E SG+EGPWT PL FD
Sbjct: 139 EGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKEASGFEGPWTSNPLIFD 198
Query: 186 NSYFVXXXXXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGF 245
NSYF P+DKALL DP FR V+ YA DEDAFF DYA +H+KLSELGF
Sbjct: 199 NSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSELGF 258
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant
Length = 249
Score = 292 bits (748), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/240 (60%), Positives = 171/240 (71%), Gaps = 1/240 (0%)
Query: 7 IDAEYLKEIEKAXXXXXXXXXXXXCAPIMLRLAWHDAGTYDAKTRTGGPDGSIRHEQEYA 66
+ A+Y K +EKA CAP+ML LAWH AGT+D T+TGGP G+I+H E A
Sbjct: 7 VSADYQKAVEKAKKKLRGFIAEKRCAPLMLALAWHSAGTFDKGTKTGGPFGTIKHPAELA 66
Query: 67 HNANNGLKIAIDLCEGVKAKHPRITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSESPE 126
H+ANNGL IA+ L E +KA+ P ++YAD YQLAGVVAVEVTGGP + F PGR+D E P
Sbjct: 67 HSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPP 126
Query: 127 EGRLPDAAQGVSHLRDIFYR-MGLSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFD 185
EGRLPDA +G HLRD+F + MGL+D+DIVALSGGHT+G AH ERSG+EGPWT PL FD
Sbjct: 127 EGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFD 186
Query: 186 NSYFVXXXXXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGF 245
NSYF P+DKALL DP FR V+ YA DEDAFF DYA +H+KLSELGF
Sbjct: 187 NSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSELGF 246
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant H42a
Length = 261
Score = 292 bits (747), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/240 (60%), Positives = 171/240 (71%), Gaps = 1/240 (0%)
Query: 7 IDAEYLKEIEKAXXXXXXXXXXXXCAPIMLRLAWHDAGTYDAKTRTGGPDGSIRHEQEYA 66
+ A+Y K +EKA CAP+MLRLAW AGT+D T+TGGP G+I+H E A
Sbjct: 19 VSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWASAGTFDKGTKTGGPFGTIKHPAELA 78
Query: 67 HNANNGLKIAIDLCEGVKAKHPRITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSESPE 126
H+ANNGL IA+ L E +KA+ P ++YAD YQLAGVVAVEVTGGP + F PGR+D E P
Sbjct: 79 HSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPP 138
Query: 127 EGRLPDAAQGVSHLRDIFYR-MGLSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFD 185
EGRLPDA +G HLRD+F + MGL+D+DIVALSGGHT+G AH ERSG+EGPWT PL FD
Sbjct: 139 EGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFD 198
Query: 186 NSYFVXXXXXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGF 245
NSYF P+DKALL DP FR V+ YA DEDAFF DYA +H+KLSELGF
Sbjct: 199 NSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSELGF 258
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|B Chain B, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|C Chain C, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|D Chain D, Crystal Structure Of Recombinant Ascorbate Peroxidase
Length = 249
Score = 291 bits (746), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/240 (59%), Positives = 169/240 (70%), Gaps = 1/240 (0%)
Query: 7 IDAEYLKEIEKAXXXXXXXXXXXXCAPIMLRLAWHDAGTYDAKTRTGGPDGSIRHEQEYA 66
+ +Y K IEKA CAP++LRLAWH AGT+D+KT+TGGP G+I+H+ E A
Sbjct: 7 VSPDYQKAIEKAKRKLRGFIAEKKCAPLILRLAWHSAGTFDSKTKTGGPFGTIKHQAELA 66
Query: 67 HNANNGLKIAIDLCEGVKAKHPRITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSESPE 126
H ANNGL IA+ L E +K + P ++YAD YQLAGVVAVE+TGGP + F PGR+D E P
Sbjct: 67 HGANNGLDIAVRLLEPIKEQFPIVSYADFYQLAGVVAVEITGGPEVPFHPGREDKPEPPP 126
Query: 127 EGRLPDAAQGVSHLRDIFYR-MGLSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFD 185
EGRLPDA +G HLRD+F + MGLSD+DIVALSGGHT+G AH ERSG+EGPWT PL FD
Sbjct: 127 EGRLPDATKGSDHLRDVFGKAMGLSDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFD 186
Query: 186 NSYFVXXXXXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGF 245
NSYF P+DKALL D FR VE YA DED FF DYA +H KLSELGF
Sbjct: 187 NSYFTELLTGEKDGLLQLPSDKALLTDSVFRPLVEKYAADEDVFFADYAEAHLKLSELGF 246
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHC|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHD|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHE|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2VCN|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant W41a
pdb|2VNX|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a After Exposure To A High Dose Of X-Rays
pdb|2VNZ|X Chain X, Crystal Structure Of Dithinonite Reduced Soybean Ascorbate
Peroxidase Mutant W41a.
pdb|2VO2|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a Subjected To Low Dose X-Rays
pdb|2WD4|A Chain A, Ascorbate Peroxidase As A Heme Oxygenase: W41a Variant
Product With T-Butyl Peroxide
Length = 261
Score = 290 bits (743), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 144/240 (60%), Positives = 171/240 (71%), Gaps = 1/240 (0%)
Query: 7 IDAEYLKEIEKAXXXXXXXXXXXXCAPIMLRLAWHDAGTYDAKTRTGGPDGSIRHEQEYA 66
+ A+Y K +EKA CAP+MLRLA H AGT+D T+TGGP G+I+H E A
Sbjct: 19 VSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAAHSAGTFDKGTKTGGPFGTIKHPAELA 78
Query: 67 HNANNGLKIAIDLCEGVKAKHPRITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSESPE 126
H+ANNGL IA+ L E +KA+ P ++YAD YQLAGVVAVEVTGGP + F PGR+D E P
Sbjct: 79 HSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPP 138
Query: 127 EGRLPDAAQGVSHLRDIFYR-MGLSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFD 185
EGRLPDA +G HLRD+F + MGL+D+DIVALSGGHT+G AH ERSG+EGPWT PL FD
Sbjct: 139 EGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFD 198
Query: 186 NSYFVXXXXXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGF 245
NSYF P+DKALL DP FR V+ YA DEDAFF DYA +H+KLSELGF
Sbjct: 199 NSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSELGF 258
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant
Length = 249
Score = 288 bits (737), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 143/240 (59%), Positives = 171/240 (71%), Gaps = 1/240 (0%)
Query: 7 IDAEYLKEIEKAXXXXXXXXXXXXCAPIMLRLAWHDAGTYDAKTRTGGPDGSIRHEQEYA 66
+ A+Y K +EKA CAP+MLRLA + AGT+D T+TGGP G+I+H E A
Sbjct: 7 VSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAAYSAGTFDKGTKTGGPFGTIKHPAELA 66
Query: 67 HNANNGLKIAIDLCEGVKAKHPRITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSESPE 126
H+ANNGL IA+ L E +KA+ P ++YAD YQLAGVVAVEVTGGP + F PGR+D E P
Sbjct: 67 HSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPP 126
Query: 127 EGRLPDAAQGVSHLRDIFYR-MGLSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFD 185
EGRLPDA +G HLRD+F + MGL+D+DIVALSGGHT+G AH ERSG+EGPWT PL FD
Sbjct: 127 EGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFD 186
Query: 186 NSYFVXXXXXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGF 245
NSYF P+DKALL DP FR V+ YA DEDAFF DYA +H+KLSELGF
Sbjct: 187 NSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSELGF 246
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant
Length = 261
Score = 288 bits (736), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 143/240 (59%), Positives = 170/240 (70%), Gaps = 1/240 (0%)
Query: 7 IDAEYLKEIEKAXXXXXXXXXXXXCAPIMLRLAWHDAGTYDAKTRTGGPDGSIRHEQEYA 66
+ A+Y K +EKA CAP+MLRLA AGT+D T+TGGP G+I+H E A
Sbjct: 19 VSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAAMSAGTFDKGTKTGGPFGTIKHPAELA 78
Query: 67 HNANNGLKIAIDLCEGVKAKHPRITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSESPE 126
H+ANNGL IA+ L E +KA+ P ++YAD YQLAGVVAVEVTGGP + F PGR+D E P
Sbjct: 79 HSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPP 138
Query: 127 EGRLPDAAQGVSHLRDIFYR-MGLSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFD 185
EGRLPDA +G HLRD+F + MGL+D+DIVALSGGHT+G AH ERSG+EGPWT PL FD
Sbjct: 139 EGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFD 198
Query: 186 NSYFVXXXXXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGF 245
NSYF P+DKALL DP FR V+ YA DEDAFF DYA +H+KLSELGF
Sbjct: 199 NSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSELGF 258
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant
Length = 261
Score = 287 bits (734), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 143/240 (59%), Positives = 170/240 (70%), Gaps = 1/240 (0%)
Query: 7 IDAEYLKEIEKAXXXXXXXXXXXXCAPIMLRLAWHDAGTYDAKTRTGGPDGSIRHEQEYA 66
+ A+Y K +EKA CAP+MLRLA AGT+D T+TGGP G+I+H E A
Sbjct: 19 VSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAACSAGTFDKGTKTGGPFGTIKHPAELA 78
Query: 67 HNANNGLKIAIDLCEGVKAKHPRITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSESPE 126
H+ANNGL IA+ L E +KA+ P ++YAD YQLAGVVAVEVTGGP + F PGR+D E P
Sbjct: 79 HSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPP 138
Query: 127 EGRLPDAAQGVSHLRDIFYR-MGLSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFD 185
EGRLPDA +G HLRD+F + MGL+D+DIVALSGGHT+G AH ERSG+EGPWT PL FD
Sbjct: 139 EGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFD 198
Query: 186 NSYFVXXXXXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGF 245
NSYF P+DKALL DP FR V+ YA DEDAFF DYA +H+KLSELGF
Sbjct: 199 NSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSELGF 258
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase
From Tobacco Plants And Structural Insights For Its
Instability
Length = 295
Score = 218 bits (556), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/264 (48%), Positives = 154/264 (58%), Gaps = 32/264 (12%)
Query: 31 CAPIMLRLAWHDAGTYDAKT----RTGGPDGSIRHEQEYAHNANNGLKIAIDLCEGVKAK 86
C PIM+RL WHDAGTY+ + GG +GS+R + E H AN GL A++L + +K K
Sbjct: 24 CHPIMVRLGWHDAGTYNKNIEEWPQRGGANGSLRFDVELKHGANAGLVNALNLLKPIKDK 83
Query: 87 HPRITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE---SPEEGRLPDAA--QGVSHLR 141
+ +TYADL+QLA A+E GGP I GR D +E PEEGRLPDA HLR
Sbjct: 84 YSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVTEPEQCPEEGRLPDAGPPSPAQHLR 143
Query: 142 DIFYRMGLSDKDIVALSGGHTLGRAHPERSGYEGP----------------WTKEPLKFD 185
D+FYRMGL+DK+IVALSG HTLGR+ P+RSG+ P WT + LKFD
Sbjct: 144 DVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTAQWLKFD 203
Query: 186 NSYFVXXXXXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELG- 244
NSYF PTD AL EDP F+ Y E YA D +AFF DYA +H KLS LG
Sbjct: 204 NSYFKDIKERRDEDLLVLPTDAALFEDPSFKVYAEKYAADPEAFFKDYAEAHAKLSNLGA 263
Query: 245 -FNPP---SLAG--IGVKENKFIS 262
F P SL G G KF++
Sbjct: 264 KFGPAEGFSLEGSPAGAAPEKFVA 287
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
pdb|3RIV|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Length = 271
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 133/232 (57%), Gaps = 20/232 (8%)
Query: 33 PIMLRLAWHDAGTYDAKTRTGGPD-GSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRIT 91
P ++RLAWH+A +YD + G P+ S+R + E + N GL I E +K K+P+I+
Sbjct: 28 PSLIRLAWHEAASYDCFKKDGSPNSASMRFKPECLYAGNKGLDIPRKALETLKKKYPQIS 87
Query: 92 YADLYQLAGVVAVEVTGGPAIDFAPGR---KDSSESPEEGRLPDAAQGVSHLRDIFYRMG 148
YADL+ LA VA+E GGP I F GR KD S +GRLPD ++ SH+R++F R+G
Sbjct: 88 YADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCGPDGRLPDGSKTQSHVREVFRRLG 147
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYF----------------VXX 192
+D++ VAL G HT G H E SGY GPWT + FDNS+F +
Sbjct: 148 FNDQETVALIGAHTCGECHIEFSGYHGPWTHDKNGFDNSFFTQLLDEDWVLNPKVEQMQL 207
Query: 193 XXXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELG 244
P+D LL DP +R YVELYAKD D F D+A + KKL+ELG
Sbjct: 208 MDRATTKLMMLPSDVCLLLDPSYRKYVELYAKDNDRFNKDFANAFKKLTELG 259
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major
Peroxidase-Cytochrome C Complex
Length = 268
Score = 185 bits (470), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 133/232 (57%), Gaps = 20/232 (8%)
Query: 33 PIMLRLAWHDAGTYDAKTRTGGPD-GSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRIT 91
P ++RLAWH+A +YD + G P+ S+R + E + N GL I E +K K+P+I+
Sbjct: 27 PSLIRLAWHEAASYDCFKKDGSPNSASMRFKPECLYAGNKGLDIPRKALETLKKKYPQIS 86
Query: 92 YADLYQLAGVVAVEVTGGPAIDFAPGR---KDSSESPEEGRLPDAAQGVSHLRDIFYRMG 148
YADL+ LA VA+E GGP I F GR KD S +GRLPD ++ SH+R++F R+G
Sbjct: 87 YADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCGPDGRLPDGSKTQSHVREVFRRLG 146
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYF----------------VXX 192
+D++ VAL G HT G H E SGY GPWT + FDNS+F +
Sbjct: 147 FNDQETVALIGAHTCGECHIEFSGYHGPWTHDKNGFDNSFFTQLLDEDWVLNPKVEQMQL 206
Query: 193 XXXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELG 244
P+D LL DP +R YVELYAKD D F D+A + KKL+ELG
Sbjct: 207 MDRATTKLMMLPSDVCLLLDPSYRKYVELYAKDNDRFNKDFANAFKKLTELG 258
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
pdb|3RIW|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
Length = 271
Score = 185 bits (469), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 133/232 (57%), Gaps = 20/232 (8%)
Query: 33 PIMLRLAWHDAGTYDAKTRTGGPD-GSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRIT 91
P ++RLAWH+A +YD + G P+ S+R + E + N GL I E +K K+P+I+
Sbjct: 28 PSLIRLAWHEAASYDCFKKDGSPNSASMRFKPECLYAGNKGLDIPRKALETLKKKYPQIS 87
Query: 92 YADLYQLAGVVAVEVTGGPAIDFAPGR---KDSSESPEEGRLPDAAQGVSHLRDIFYRMG 148
YADL+ LA VA+E GGP I F GR KD S +GRLPD ++ SH+R++F R+G
Sbjct: 88 YADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCGPDGRLPDGSKTQSHVREVFRRLG 147
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYF----------------VXX 192
+D++ VAL G HT G H E SGY GPWT + FDNS+F +
Sbjct: 148 FNDQETVALIGAHTCGETHIEFSGYHGPWTHDKNGFDNSFFTQLLDEDWVLNPKVEQMQL 207
Query: 193 XXXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELG 244
P+D LL DP +R YVELYAKD D F D+A + KKL+ELG
Sbjct: 208 MDRATTKLMMLPSDVCLLLDPSYRKYVELYAKDNDRFNKDFANAFKKLTELG 259
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In
Cytochrome C Peroxidase (Ccp)
Length = 294
Score = 170 bits (430), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 133/238 (55%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 43 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 162
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G HTLG+ H + SGYEGPWT P FDNS+++
Sbjct: 163 MNDREVVALMGAHTLGKTHLKNSGYEGPWTANPNVFDNSFYLNLLNEDWKLEKNDANNEQ 222
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 280
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant:
Ccpk2m3
Length = 294
Score = 168 bits (426), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 133/238 (55%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 43 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 162
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VALSG HTLG+ H + SGYEGPWT FDNS+++
Sbjct: 163 MNDREVVALSGAHTLGKTHLKNSGYEGPWTANNNVFDNSFYLNLLNEDWKLEKNDANNEQ 222
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 223 WDSKSGYLQLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 280
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding
Variant Of Cytochrome C Peroxidase
Length = 294
Score = 167 bits (422), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 132/238 (55%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 43 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 162
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G HTLG+ H + SGYEGPWT FDNS+++
Sbjct: 163 MNDREVVALMGAHTLGKTHLKNSGYEGPWTANNNVFDNSFYLNLLNEDWKLEKNDANNEQ 222
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 280
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant:
Ccpk2m2
Length = 294
Score = 166 bits (421), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 132/238 (55%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 43 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 162
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G HTLG+ H + SGYEGPWT FDNS+++
Sbjct: 163 MNDREVVALMGAHTLGKTHLKNSGYEGPWTANNNVFDNSFYLNLLNEDWKLEKNDANNEQ 222
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 223 WDSKSGYLQLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 280
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C
Peroxidase (Ccp)
Length = 294
Score = 164 bits (414), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 131/238 (55%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 43 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 162
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G HTLG+ H + SGYEGPW FDNS+++
Sbjct: 163 MNDREVVALMGAHTLGKTHLKNSGYEGPWDATNNVFDNSFYLNLLNEDWKLEKNDANNEQ 222
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 280
>pdb|3E2N|A Chain A, Engineering Ascorbate Peroxidase Activity Into Cytochrome
C Peroxidase
Length = 287
Score = 160 bits (404), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 130/239 (54%), Gaps = 18/239 (7%)
Query: 31 CAPIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPR 89
C P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P
Sbjct: 35 CGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPW 94
Query: 90 ITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRM 147
I+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 95 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRL 154
Query: 148 GLSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XX 192
++D+++VAL G H LG+ H +RSGYEGP+ F N +++
Sbjct: 155 NMNDREVVALMGAHALGKTHLKRSGYEGPFGAANNVFTNEFYLNLLNEDWKLEKNDANNE 214
Query: 193 XXXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 215 QWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 273
>pdb|2V2E|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytochrome C
Peroxidase Mutant N184r Y36a
Length = 294
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 129/238 (54%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 43 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 162
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H +RSGYEGPW F N +++
Sbjct: 163 MNDREVVALMGAHALGKTHLKRSGYEGPWGAANNVFTNEFYLNLLNENWKLEKNDANNEQ 222
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 280
>pdb|2V23|A Chain A, Structure Of Cytochrome C Peroxidase Mutant N184r Y36a
pdb|4A6Z|A Chain A, Cytochrome C Peroxidase With Bound Guaiacol
Length = 296
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 129/238 (54%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 45 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 164
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H +RSGYEGPW F N +++
Sbjct: 165 MNDREVVALMGAHALGKTHLKRSGYEGPWGAANNVFTNEFYLNLLNENWKLEKNDANNEQ 224
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 225 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 282
>pdb|4A71|A Chain A, Cytochrome C Peroxidase In Complex With Phenol
Length = 296
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 129/238 (54%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 45 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 164
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H +RSGYEGPW F N +++
Sbjct: 165 MNDREVVALMGAHALGKTHLKRSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 225 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 282
>pdb|3M23|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M25|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M26|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M27|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M28|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M29|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2A|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2B|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2C|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2D|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2E|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2F|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2G|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2H|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2I|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
Length = 291
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 129/238 (54%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 40 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 159
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H +RSGYEGPW F N +++
Sbjct: 160 MNDREVVALMGAHALGKTHLKRSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 219
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 220 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 277
>pdb|1CCK|A Chain A, Altering Substrate Specificity Of Cytochrome C Peroxidase
Towards A Small Molecular Substrate Peroxidase By
Substituting Tyrosine For Phe 202
Length = 291
Score = 157 bits (398), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 40 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 159
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N Y++
Sbjct: 160 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEYYLNLLNEDWKLEKNDANNEQ 219
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 220 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 277
>pdb|2XIL|A Chain A, The Structure Of Cytochrome C Peroxidase Compound I
Length = 294
Score = 157 bits (397), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 43 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 162
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNENWKLEKNDANNEQ 222
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 280
>pdb|2XJ5|A Chain A, The Structure Of Cytochrome C Peroxidase Compound Ii
pdb|2XJ8|A Chain A, The Structure Of Ferrous Cytochrome C Peroxidase
Length = 294
Score = 157 bits (397), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 43 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 162
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 222
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 280
>pdb|1S6V|A Chain A, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site
Specific Cross-Link
pdb|1S6V|C Chain C, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site
Specific Cross-Link
Length = 294
Score = 157 bits (397), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 43 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRAGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 162
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNCFTNEFYLNLLNEDWKLEKNDANNEQ 222
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 280
>pdb|1KOK|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase
(Mpccp)
pdb|1ZBY|A Chain A, High-resolution Crystal Structure Of Native (resting)
Cytochrome C Peroxidase (ccp)
pdb|1ZBZ|A Chain A, High-Resolution Crystal Structure Of Compound I
Intermediate Of Cytochrome C Peroxidase (Ccp)
pdb|1S73|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase (R-
Isomer) [mpccp-R]
pdb|1SBM|A Chain A, Crystal Structure Of Reduced Mesopone Cytochrome C
Peroxidase (R-Isomer)
pdb|1Z53|A Chain A, The 1.13 Angstrom Structure Of Iron-Free Cytochrome C
Peroxidase
pdb|1SDQ|A Chain A, Structure Of Reduced-No Adduct Of Mesopone Cytochrome C
Peroxidase
pdb|2B0Z|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82i Cytochrome C And Cytochrome C Peroxidase
pdb|2B10|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82s Cytochrome C And Cytochrome C Peroxidase
pdb|2B10|C Chain C, Crystal Structure Of The Protein-Protein Complex Between
F82s Cytochrome C And Cytochrome C Peroxidase
pdb|2B11|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82w Cytochrome C And Cytochrome C Peroxidase
pdb|2B11|C Chain C, Crystal Structure Of The Protein-Protein Complex Between
F82w Cytochrome C And Cytochrome C Peroxidase
pdb|2B12|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82y Cytochrome C And Cytochrome C Peroxidase
pdb|2CYP|A Chain A, Crystal Structure Of Yeast Cytochrome C Peroxidase Refined
At 1.7-Angstroms Resolution
pdb|2YCG|A Chain A, Structure Of Unreduced Ferric Cytochrome C Peroxidase
Obtained By Multicrystal Method
Length = 294
Score = 157 bits (396), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 43 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 162
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 222
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 280
>pdb|3R98|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C
Peroxidase
pdb|3R99|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C
Peroxidase
Length = 293
Score = 157 bits (396), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 42 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 101
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 102 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 161
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 162 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 221
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 222 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 279
>pdb|4A78|A Chain A, Cytochrome C Peroxidase M119w In Complex With Guiacol
Length = 296
Score = 157 bits (396), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 45 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 105 SSGDLFSLGGVTAVQEWQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 164
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 225 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 282
>pdb|1A2F|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 40 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 159
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 160 MNDREVVALKGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 219
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 220 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 277
>pdb|3E2O|A Chain A, Crystal Structure Of Cytochrome C Peroxidase, N184r Mutant
Length = 294
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 43 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 162
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H +RSGYEGPW F N +++
Sbjct: 163 MNDREVVALMGAHALGKTHLKRSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 222
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PT +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 223 WDSKSGYMMLPTXYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 280
>pdb|1EBE|A Chain A, Laue Diffraction Study On The Structure Of Cytochrome C
Peroxidase Compound I
Length = 294
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 43 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 162
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 222
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLEDGITFPKDA 280
>pdb|1CCA|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 156 bits (395), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 46 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 105
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 106 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 165
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 166 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 225
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 226 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 283
>pdb|2PCB|A Chain A, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCB|C Chain C, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCC|A Chain A, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCC|C Chain C, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|1U74|A Chain A, Electron Transfer Complex Between Cytochrome C And
Cytochrome C Peroxidase
pdb|1U74|C Chain C, Electron Transfer Complex Between Cytochrome C And
Cytochrome C Peroxidase
pdb|1U75|A Chain A, Electron Transfer Complex Between Horse Heart Cytochrome C
And Zinc- Porphyrin Substituted Cytochrome C Peroxidase
pdb|1U75|C Chain C, Electron Transfer Complex Between Horse Heart Cytochrome C
And Zinc- Porphyrin Substituted Cytochrome C Peroxidase
pdb|2BCN|A Chain A, Solvent Isotope Effects On Interfacial Protein Electron
Transfer Between Cytochrome C And Cytochrome C
Peroxidase
pdb|2BCN|C Chain C, Solvent Isotope Effects On Interfacial Protein Electron
Transfer Between Cytochrome C And Cytochrome C
Peroxidase
pdb|1CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 45 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 164
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 225 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 282
>pdb|2GB8|A Chain A, Solution Structure Of The Complex Between Yeast Iso-1-
Cytochrome C And Yeast Cytochrome C Peroxidase
pdb|2JTI|A Chain A, Solution Structure Of The Yeast Iso-1-Cytochrome C (T12a)
: Yeast Cytochrome C Peroxidase Complex
Length = 294
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 43 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 162
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 222
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 280
>pdb|1CYF|A Chain A, Identifying The Physiological Electron Transfer Site Of
Cytochrome C Peroxidase By Structure-Based Engineering
Length = 296
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 45 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRAGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 164
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPWGCANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 225 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 282
>pdb|4A7M|A Chain A, Cytochrome C Peroxidase S81w Mutant
Length = 296
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 127/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ N GL+ E + + P I
Sbjct: 45 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPWNAGLQNGFKFLEPIHKEFPWI 104
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 164
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 225 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 282
>pdb|2CEP|A Chain A, Role Of Met-230 In Intramolecular Electron Transfer
Between The Oxyferryl Heme And Trp 191 In Cytochrome C
Peroxidase Compound Ii
Length = 296
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 45 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 164
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 225 WDSKSGYIMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 282
>pdb|1BEP|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
pdb|1BJ9|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
Length = 291
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 40 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 159
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 160 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 219
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 220 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLEDGITFPKDA 277
>pdb|1BEK|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
Length = 291
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 40 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 159
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 160 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 219
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 220 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLEDGITFPKDA 277
>pdb|1A2G|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 40 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 159
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 160 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 219
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 220 WDSKSGYMHLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 277
>pdb|6CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between
Cytochrome C Peroxidase And Hydrogen Peroxide
Length = 296
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P++++LAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 45 GPVLVKLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 164
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 225 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 282
>pdb|4CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of
Cytochrome C Peroxidase
Length = 294
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 43 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPD + ++R F R+
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDMDKDAGYVRTFFQRLN 162
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 222
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 280
>pdb|1MK8|A Chain A, Crystal Structure Of A Mutant Cytochrome C Peroxidase
Showing A Novel Trp-Tyr Covalent Cross-Link
pdb|1MKQ|A Chain A, Crystal Structure Of The Mutant Variant Of Cytochrome C
Peroxidase In The 'open' Uncross-Linked Form
pdb|1MKR|A Chain A, Crystal Structure Of A Mutant Variant Of Cytochrome C
Peroxidase (Plate Like Crystals)
pdb|1ML2|A Chain A, Crystal Structure Of A Mutant Variant Of Cytochrome C
Peroxidase With Zn(Ii)-(20-Oxo-Protoporphyrin Ix)
Length = 294
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAW+ +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 43 GPVLVRLAWYTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 162
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 222
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 280
>pdb|1CCB|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 46 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 105
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 106 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 165
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 166 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 225
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PT+ +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 226 WDSKSGYMMLPTEYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 283
>pdb|2X07|A Chain A, Cytochrome C Peroxidase: Engineered Ascorbate Binding Site
pdb|2X08|A Chain A, Cytochrome C Peroxidase: Ascorbate Bound To The Engineered
Ascorbate Binding Site
Length = 293
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 129/238 (54%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 42 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 101
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 102 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 161
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H +RSGYEGP+ F N +++
Sbjct: 162 MNDREVVALMGAHALGKTHLKRSGYEGPFGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 221
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 222 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDRFFKDFSKAFEKLLENGITFPKDA 279
>pdb|2CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 45 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 164
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PT+ +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 225 WDSKSGYMMLPTNYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 282
>pdb|1CCL|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 154 bits (389), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 127/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 40 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 159
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N ++
Sbjct: 160 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEKYLNLLNEDWKLEKNDANNEQ 219
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 220 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 277
>pdb|3CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of
Cytochrome C Peroxidase
Length = 294
Score = 154 bits (389), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 43 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPD + ++R F R+
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDYDKDAGYVRTFFQRLN 162
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 222
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 280
>pdb|1CCI|A Chain A, How Flexible Are Proteins? Trapping Of A Flexible Loop
pdb|1CCJ|A Chain A, Conformer Selection By Ligand Binding Observed With
Protein Crystallography
Length = 294
Score = 154 bits (388), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 127/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 43 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 162
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N ++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEGYLNLLNEDWKLEKNDANNEQ 222
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 280
>pdb|7CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between
Cytochrome C Peroxidase And Hydrogen Peroxide
Length = 296
Score = 154 bits (388), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++ LAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 45 GPVLVLLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 164
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 225 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 282
>pdb|1CCC|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 154 bits (388), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 46 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 105
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 106 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 165
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 166 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 225
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PT +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 226 WDSKSGYMMLPTAYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 283
>pdb|1DJ1|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C
Peroxidase
pdb|1DJ5|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C
Peroxidase With N-Hydroxyguanidine Bound
Length = 291
Score = 153 bits (387), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++ LAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 40 GPVLVALAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 159
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 160 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 219
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 220 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 277
>pdb|5CCP|A Chain A, Histidine 52 Is A Critical Residue For Rapid Formation Of
Cytochrome C Peroxidase Compound I
Length = 296
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAW +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 45 GPVLVRLAWLISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 164
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 225 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 282
>pdb|1CCE|A Chain A, Construction Of A Bis-Aquo Heme Enzyme And Replacement
With Exogenous Ligand
pdb|1CCG|A Chain A, Construction Of A Bis-Aquo Heme Enzyme And Replacement
With Exogenous Ligand
Length = 291
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 40 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 159
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G LG+ H + SGYEGPW F N +++
Sbjct: 160 MNDREVVALMGAGALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 219
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 220 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 277
>pdb|1DS4|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex,
Ph 6, 100k
pdb|1DSG|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex At
Ph 5, Room Temperature.
pdb|1DSO|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex At
Ph 6, Room Temperature.
pdb|1DSP|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex At
Ph 7, Room Temperature
Length = 292
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 41 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 100
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 101 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 160
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G LG+ H + SGYEGPW F N +++
Sbjct: 161 MNDREVVALMGAGALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 220
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 221 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 278
>pdb|4CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLA+H +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 45 GPVLVRLAFHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 164
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 225 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 282
>pdb|1DCC|A Chain A, 2.2 Angstrom Structure Of Oxyperoxidase: A Model For The
Enzyme:peroxide Complex
pdb|3CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 45 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 164
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGP+ F N +++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPFGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 225 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 282
>pdb|1BVA|A Chain A, Manganese Binding Mutant In Cytochrome C Peroxidase
Length = 294
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 126/235 (53%), Gaps = 18/235 (7%)
Query: 35 MLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRITYA 93
++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I+
Sbjct: 46 LVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWISSG 105
Query: 94 DLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMGLSD 151
DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+ ++D
Sbjct: 106 DLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLNMND 165
Query: 152 KDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXXXXX 196
+++VAL G H LG+ H + SGYEGPW F N +++
Sbjct: 166 REVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQWDS 225
Query: 197 XXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 226 KSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 280
>pdb|1BEQ|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
pdb|1BES|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 40 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 159
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGP+ F N +++
Sbjct: 160 MNDREVVALMGAHALGKTHLKNSGYEGPYGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 219
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 220 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLEDGITFPKDA 277
>pdb|1DSE|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex,
With Phosphate Bound, Ph 6, 100k
Length = 292
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 127/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++++ +N GL+ E + + P I
Sbjct: 41 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKQFNDPSNAGLQNGFKFLEPIHKEFPWI 100
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 101 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 160
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G LG+ H + SGYEGPW F N +++
Sbjct: 161 MNDREVVALMGAGALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 220
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 221 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 278
>pdb|1CPG|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
Length = 296
Score = 151 bits (382), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 45 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 164
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGP F N +++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPQGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 225 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 282
>pdb|2IA8|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned
Manganese-Binding Site In Cytochrome C Peroxidase
pdb|2ICV|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned
Manganese-Binding Site In Cytochrome C Peroxidase
Length = 291
Score = 151 bits (381), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 126/238 (52%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P ++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 40 GPELVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 159
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ + SGYEGPW F N +++
Sbjct: 160 MNDREVVALMGAHALGKTELKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 219
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 220 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 277
>pdb|1BEM|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 150 bits (380), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 40 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 159
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGP F N +++
Sbjct: 160 MNDREVVALMGAHALGKTHLKNSGYEGPQGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 219
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 220 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLEDGITFPKDA 277
>pdb|2AQD|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,5-
Diaminopyridine
pdb|2AS1|A Chain A, Cytochrome C Peroxidase In Complex With Thiopheneamidine
pdb|2AS2|A Chain A, Cytochrome C Peroxidase In Complex With 2-Iminopiperidine
pdb|2AS3|A Chain A, Cytochrome C Peroxidase In Complex With Phenol
pdb|2AS4|A Chain A, Cytochrome C Peroxidase In Complex With 3-Fluorocatechol
pdb|2AS6|A Chain A, Cytochrome C Peroxidase In Complex With Cyclopentylamine
pdb|2EUN|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,4-
Diaminopyrimidine
pdb|2EUO|A Chain A, Cytochrome C Peroxidase (ccp) In Complex With 1-methyl-1-
Lambda-5-pyridin-3-yl-amine
pdb|2EUP|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2-Amino-5-
Picoline
pdb|2EUQ|A Chain A, Cytochrome C Peroxydase (Ccp) In Complex With 3-
Thienylmethylamine
pdb|2EUR|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 4-
Pyridylcarbinol
pdb|2EUS|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With Benzylamine
pdb|2EUT|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2-Amino-4-
Picoline
pdb|2EUU|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With
1h-Imidazol-2- Ylmethanol
pdb|1AA4|A Chain A, Specificity Of Ligand Binding In A Buried Polar Cavity Of
Cytochrome C Peroxidase
pdb|1CMP|A Chain A, Small Molecule Binding To An Artificially Created Cavity
At The Active Site Of Cytochrome C Peroxidase
pdb|1CMQ|A Chain A, Small Molecule Binding To An Artificially Created Cavity
At The Active Site Of Cytochrome C Peroxidase
pdb|1CMT|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An
Artificial Cavity At The Radical Site Of Cytochrome C
Peroxidase
pdb|1RYC|A Chain A, Cytochrome C Peroxidase W191g From Saccharomyces
Cerevisiae
pdb|2Y5A|A Chain A, Cytochrome C Peroxidase (Ccp) W191g Bound To
3-Aminopyridine
Length = 294
Score = 150 bits (380), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 43 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 162
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGP F N +++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPGGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 222
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 280
>pdb|1CPD|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
pdb|1CPE|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
pdb|1CPF|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
Length = 296
Score = 150 bits (380), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 45 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 164
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGP F N +++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPGGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 225 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 282
>pdb|1BEJ|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 150 bits (379), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 40 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 159
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGP F N +++
Sbjct: 160 MNDREVVALMGAHALGKTHLKNSGYEGPGGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 219
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 220 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLEDGITFPKDA 277
>pdb|2RBU|X Chain X, Cytochrome C Peroxidase In Complex With
Cyclopentane-Carboximidamide
pdb|2RBV|X Chain X, Cytochrome C Peroxidase In Complex With
(1-Methyl-1h-Pyrrol-2-Yl)- Methylamine
pdb|2RBW|X Chain X, Cytochrome C Peroxidase W191g In Complex With
1,2-dimethyl-1h-pyridin- 5-amine
pdb|2RBY|X Chain X, 1-methyl-5-imidazolecarboxaldehyde In Complex With
Cytochrome C Peroxidase W191g
pdb|2RBZ|X Chain X, Cytochrome C Peroxidase W191g In Complex 3-Methoxypyridine
pdb|2RC0|X Chain X, Cytochrome C Peroxidase W191g In Complex With 2-Imino-4-
Methylpiperdine
pdb|2RC2|X Chain X, Cytochrome C Peroxidase W191g In Complex With
1-Methyl-2-Vinyl- Pyridinium
pdb|2RBT|X Chain X, N-Methylbenzylamine In Complex With Cytochrome C
Peroxidase W191g
pdb|2RBX|X Chain X, Cytochrome C Peroxidase W191g In Complex With
Pyrimidine-2,4,6- Triamine.
pdb|2RC1|X Chain X, Cytochrome C Peroxidase W191g In Complex With
2,4,5-Trimethyl-3- Oxazoline
Length = 292
Score = 150 bits (379), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 41 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 100
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 101 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 160
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGP F N +++
Sbjct: 161 MNDREVVALMGAHALGKTHLKNSGYEGPGGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 220
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 221 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLEDGITFPKDA 278
>pdb|2ANZ|A Chain A, Cytochrome C Peroxidase In Complex With
2,6-Diaminopyridine
pdb|1AC4|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (2,3,4-Trimethyl-1,3-Thiazole)
pdb|1AC8|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (3,4,5-Trimethylthiazole)
pdb|1AEB|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3-
Methylthiazole)
pdb|1AED|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3,4-
Dimethylthiazole)
pdb|1AEE|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Aniline)
pdb|1AEF|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3-
Aminopyridine)
pdb|1AEG|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (4-
Aminopyridine)
pdb|1AEH|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-Amino-4-
Methylthiazole)
pdb|1AEJ|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (1-
Vinylimidazole)
pdb|1AEK|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Indoline)
pdb|1AEM|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Imidazo[1,2-
A]pyridine)
pdb|1AEN|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-Amino-5-
Methylthiazole)
pdb|1AEO|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-
Aminopyridine)
pdb|1AEQ|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (2-Ethylimidazole)
pdb|1AES|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Imidazole)
pdb|1AET|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (1-Methylimidazole)
pdb|1AEU|A Chain A, Specificity Of Ligand Binding In A Polar Cavity Of
Cytochrome C Peroxidase (2-Methylimidazole)
pdb|1AEV|A Chain A, Introduction Of Novel Substrate Oxidation Into Cytochrome
C Peroxidase By Cavity Complementation: Oxidation Of 2-
Aminothiazole And Covalent Modification Of The Enzyme
(2- Aminothiazole)
Length = 294
Score = 150 bits (379), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 43 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 162
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGP F N +++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPGGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 222
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLEDGITFPKDA 280
>pdb|1CMU|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An
Artificial Cavity At The Radical Site Of Cytochrome C
Peroxidase
Length = 294
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 127/238 (53%), Gaps = 18/238 (7%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 43 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 162
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNSYFV---------------XXX 193
++D+++VAL G H LG+ H + SGYEGP F N +++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPGGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 222
Query: 194 XXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PT+ +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 223 WDSKSGYMMLPTNYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 280
>pdb|1KXM|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Transfer Pathway Excised To Form A
Ligand Binding Channel
Length = 290
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 125/236 (52%), Gaps = 16/236 (6%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 41 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 100
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 101 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 160
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEG-------------PWTKEPLKFDNSYFVXXXXX 195
++D+++VAL G H LG+ H + SGYEG E K + +
Sbjct: 161 MNDREVVALMGAHALGKTHLKNSGYEGGGANNVFTNEFYLNLLNEDWKLEKNDANNEQWD 220
Query: 196 XXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 221 SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 276
>pdb|3EXB|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Pathway Excised In A Complex With A
Peptide Wire
Length = 295
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 125/236 (52%), Gaps = 16/236 (6%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 46 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 105
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 106 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 165
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEG-------------PWTKEPLKFDNSYFVXXXXX 195
++D+++VAL G H LG+ H + SGYEG E K + +
Sbjct: 166 MNDREVVALMGAHALGKTHLKNSGYEGGGANNVFTNEFYLNLLNEDWKLEKNDANNEQWD 225
Query: 196 XXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 226 SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 281
>pdb|1KXN|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Transfer Pathway Excised To Form A
Ligand Binding Channel
Length = 289
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 125/236 (52%), Gaps = 16/236 (6%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGP-DGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPRI 90
P+++RLAWH +GT+D TGG G+ R ++E+ +N GL+ E + + P I
Sbjct: 40 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE--SPEEGRLPDAAQGVSHLRDIFYRMG 148
+ DL+ L GV AV+ GP I + GR D+ E +P+ GRLPDA + ++R F R+
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 159
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEG-------------PWTKEPLKFDNSYFVXXXXX 195
++D+++VAL G H LG+ H + SGYEG E K + +
Sbjct: 160 MNDREVVALMGAHALGKTHLKNSGYEGGGANNVFTNEFYLNLLNEDWKLEKNDANNEQWD 219
Query: 196 XXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSLA 251
PTD +L++DPK+ V+ YA D+D FF D++ + +KL E G P A
Sbjct: 220 SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDA 275
>pdb|3RRW|A Chain A, Crystal Structure Of The Tl29 Protein From Arabidopsis
Thaliana
pdb|3RRW|B Chain B, Crystal Structure Of The Tl29 Protein From Arabidopsis
Thaliana
Length = 268
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 74/160 (46%), Gaps = 34/160 (21%)
Query: 33 PIMLRLAWHDAGTYDAKTRTGGPDGSIRHEQEYAHNANNGLKIAIDLCEGVK------AK 86
P +L+LA +DA TYD T++GG +GSIR E + N GL + L E VK +K
Sbjct: 33 PSLLKLALNDAXTYDKATKSGGANGSIRFSSELSRAENEGLSDGLSLIEEVKKEIDSISK 92
Query: 87 HPRITYADLYQLAGVVAVEVT---------GGPA------------------IDFAPGRK 119
I+YAD+ QLAG AV+ T GG D GR
Sbjct: 93 GGPISYADIIQLAGQSAVKFTYLASAIRKCGGNEEKGNLLYTAYGSAGQWGLFDRNFGRS 152
Query: 120 DSSESPEEGRLPDAAQG-VSHLRDIFYRMGLSDKDIVALS 158
D++E+ EGR+P + V +D F +GL + + S
Sbjct: 153 DATEADPEGRVPQWGKATVQEXKDKFIAVGLGPRQLAVXS 192
>pdb|3VLH|A Chain A, Crystal Structure Analysis Of The Arg409leu Variants Of
Katg From Haloarcula Marismortui
pdb|3VLH|B Chain B, Crystal Structure Analysis Of The Arg409leu Variants Of
Katg From Haloarcula Marismortui
pdb|3VLI|A Chain A, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Katg From Haloarcula Marismortui
pdb|3VLI|B Chain B, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Katg From Haloarcula Marismortui
pdb|3VLJ|A Chain A, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Complexes With O-Dianisidine In Katg From
Haloarcula Marismortui
pdb|3VLJ|B Chain B, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Complexes With O-Dianisidine In Katg From
Haloarcula Marismortui
Length = 737
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 117/329 (35%), Gaps = 115/329 (34%)
Query: 33 PIMLRLAWHDAGTY---DAKTRTGGPDGSIRHEQEYAHNANNGLKIAIDLCEGVKAKH-P 88
P+ +R+AWH AGTY D + G + NAN L A L +K K+
Sbjct: 88 PLFIRMAWHSAGTYRTADGRGGAAGGRQRFAPINSWPDNAN--LDKARRLLLPIKQKYGQ 145
Query: 89 RITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSES-------PEE-----------GRL 130
+I++ADL LAG VA+E G +A GR+D+ E PE+ G +
Sbjct: 146 KISWADLMILAGNVAIESMGFKTFGYAGGREDAFEEDKAVNWGPEDEFETQERFDEPGEI 205
Query: 131 ----------------------PDAAQGVSHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH 167
PD ++R F RM ++DK+ AL +GGHT G+ H
Sbjct: 206 QEGLGASVMGLIYVNPEGPDGNPDPEASAKNIRQTFDRMAMNDKETAALIAGGHTFGKVH 265
Query: 168 ----PER--------------------------------SGYEGPWTKEPLKFD------ 185
PE SG EGPWT+ P ++D
Sbjct: 266 GADDPEENLGPEPEAAPIEQQGLGWQNKNGNSKGGEMITSGIEGPWTQSPTEWDMGYINN 325
Query: 186 --------------------------NSYFVXXXXXXXXXXXXXPTDKALLEDPKFRYYV 219
NS TD AL DP +R +
Sbjct: 326 LLDYEWEPEKGPGGAWQWAPKSEELKNSVPDAHDPDEKQTPMMLTTDIALKRDPDYREVM 385
Query: 220 ELYAKDEDAFFTDYAASHKKLSELGFNPP 248
E + ++ F ++A + KL+ L PP
Sbjct: 386 ETFQENPMEFGMNFAKAWYKLTHLDMGPP 414
Score = 32.0 bits (71), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 33/188 (17%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGS---IRHEQEYAHNANNGLKIAIDLCEGVKAKH---- 87
+++ AW A TY + GG +G+ + ++ + N L+ + E ++ +
Sbjct: 463 LVKTAWASASTYRDSDKRGGANGARLRLEPQKNWEVNEPEQLETVLGTLENIQTEFNDSR 522
Query: 88 ---PRITYADLYQLAGVVAVEVTGGPA-----IDFAPGRKDS----SESPEEGRLPDAAQ 135
+++ ADL L G AVE A I F PGR D+ +++P L
Sbjct: 523 SDGTQVSLADLIVLGGNAAVEQAAANAGYDVEIPFEPGRVDAGPEHTDAPSFDALKPKVD 582
Query: 136 GV-SHLRDIFYR------------MGLSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPL 182
GV ++++D R + L+ ++ AL GG A+ + + G +T EP
Sbjct: 583 GVRNYIQDDITRPAEEVLVDNADLLNLTASELTALIGGMRSIGANYQDTDL-GVFTDEPE 641
Query: 183 KFDNSYFV 190
N +FV
Sbjct: 642 TLTNDFFV 649
>pdb|1ITK|A Chain A, Crystal Structure Of Catalase-peroxidase From Haloarcula
Marismortui
pdb|1ITK|B Chain B, Crystal Structure Of Catalase-peroxidase From Haloarcula
Marismortui
Length = 731
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 116/329 (35%), Gaps = 115/329 (34%)
Query: 33 PIMLRLAWHDAGTY---DAKTRTGGPDGSIRHEQEYAHNANNGLKIAIDLCEGVKAKH-P 88
P+ +R+AWH AGTY D + G + NAN L A L +K K+
Sbjct: 88 PLFIRMAWHSAGTYRTADGRGGAAGGRQRFAPINSWPDNAN--LDKARRLLLPIKQKYGQ 145
Query: 89 RITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSES-------PEE-----------GRL 130
+I++ADL LAG VA+E G +A GR+D+ E PE+ G +
Sbjct: 146 KISWADLMILAGNVAIESMGFKTFGYAGGREDAFEEDKAVNWGPEDEFETQERFDEPGEI 205
Query: 131 ----------------------PDAAQGVSHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH 167
PD ++R F RM ++DK+ AL +GGHT G+ H
Sbjct: 206 QEGLGASVMGLIYVNPEGPDGNPDPEASAKNIRQTFDRMAMNDKETAALIAGGHTFGKVH 265
Query: 168 ----PER--------------------------------SGYEGPWTKEPLKFD------ 185
PE SG EGPWT+ P ++D
Sbjct: 266 GADDPEENLGPEPEAAPIEQQGLGWQNKNGNSKGGEMITSGIEGPWTQSPTEWDMGYINN 325
Query: 186 --------------------------NSYFVXXXXXXXXXXXXXPTDKALLEDPKFRYYV 219
NS TD AL DP +R +
Sbjct: 326 LLDYEWEPEKGPGGAWQWAPKSEELKNSVPDAHDPDEKQTPMMLTTDIALKRDPDYREVM 385
Query: 220 ELYAKDEDAFFTDYAASHKKLSELGFNPP 248
E + ++ F ++A + KL+ PP
Sbjct: 386 ETFQENPMEFGMNFAKAWYKLTHRDMGPP 414
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 33/188 (17%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGS---IRHEQEYAHNANNGLKIAIDLCEGVKAKH---- 87
+++ AW A TY + GG +G+ + ++ + N L+ + E ++ +
Sbjct: 463 LVKTAWASASTYRDSDKRGGANGARLRLEPQKNWEVNEPEQLETVLGTLENIQTEFNDSR 522
Query: 88 ---PRITYADLYQLAGVVAVEVTGGPA-----IDFAPGRKDS----SESPEEGRLPDAAQ 135
+++ ADL L G AVE A I F PGR D+ +++P L
Sbjct: 523 SDGTQVSLADLIVLGGNAAVEQAAANAGYDVEIPFEPGRVDAGPEHTDAPSFDALKPKVD 582
Query: 136 GV-SHLRDIFYR------------MGLSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPL 182
GV ++++D R + L+ ++ AL GG A+ + + G +T EP
Sbjct: 583 GVRNYIQDDITRPAEEVLVDNADLLNLTASELTALIGGMRSIGANYQDTDL-GVFTDEPE 641
Query: 183 KFDNSYFV 190
N +FV
Sbjct: 642 TLTNDFFV 649
>pdb|3UW8|A Chain A, Crystal Structure Analysis Of The Ser305thr Variants Of
Katg From Haloarcula Marismortui
pdb|3UW8|B Chain B, Crystal Structure Analysis Of The Ser305thr Variants Of
Katg From Haloarcula Marismortui
Length = 737
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 116/329 (35%), Gaps = 115/329 (34%)
Query: 33 PIMLRLAWHDAGTY---DAKTRTGGPDGSIRHEQEYAHNANNGLKIAIDLCEGVKAKH-P 88
P+ +R+AWH AGTY D + G + NAN L A L +K K+
Sbjct: 88 PLFIRMAWHSAGTYRTADGRGGAAGGRQRFAPINSWPDNAN--LDKARRLLLPIKQKYGQ 145
Query: 89 RITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSES-------PEE-----------GRL 130
+I++ADL LAG VA+E G +A GR+D+ E PE+ G +
Sbjct: 146 KISWADLMILAGNVAIESMGFKTFGYAGGREDAFEEDKAVNWGPEDEFETQERFDEPGEI 205
Query: 131 ----------------------PDAAQGVSHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH 167
PD ++R F RM ++DK+ AL +GGHT G+ H
Sbjct: 206 QEGLGASVMGLIYVNPEGPDGNPDPEASAKNIRQTFDRMAMNDKETAALIAGGHTFGKVH 265
Query: 168 ----PER--------------------------------SGYEGPWTKEPLKFD------ 185
PE +G EGPWT+ P ++D
Sbjct: 266 GADDPEENLGPEPEAAPIEQQGLGWQNKNGNSKGGEMITTGIEGPWTQSPTEWDMGYINN 325
Query: 186 --------------------------NSYFVXXXXXXXXXXXXXPTDKALLEDPKFRYYV 219
NS TD AL DP +R +
Sbjct: 326 LLDYEWEPEKGPGGAWQWAPKSEELKNSVPDAHDPDEKQTPMMLTTDIALKRDPDYREVM 385
Query: 220 ELYAKDEDAFFTDYAASHKKLSELGFNPP 248
E + ++ F ++A + KL+ PP
Sbjct: 386 ETFQENPMEFGMNFAKAWYKLTHRDMGPP 414
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 33/188 (17%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGS---IRHEQEYAHNANNGLKIAIDLCEGVKAKH---- 87
+++ AW A TY + GG +G+ + ++ + N L+ + E ++ +
Sbjct: 463 LVKTAWASASTYRDSDKRGGANGARLRLEPQKNWEVNEPEQLETVLGTLENIQTEFNDSR 522
Query: 88 ---PRITYADLYQLAGVVAVEVTGGPA-----IDFAPGRKDS----SESPEEGRLPDAAQ 135
+++ ADL L G AVE A I F PGR D+ +++P L
Sbjct: 523 SDGTQVSLADLIVLGGNAAVEQAAANAGYDVEIPFEPGRVDAGPEHTDAPSFDALKPKVD 582
Query: 136 GV-SHLRDIFYR------------MGLSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPL 182
GV ++++D R + L+ ++ AL GG A+ + + G +T EP
Sbjct: 583 GVRNYIQDDITRPAEEVLVDNADLLNLTASELTALIGGMRSIGANYQDTDL-GVFTDEPE 641
Query: 183 KFDNSYFV 190
N +FV
Sbjct: 642 TLTNDFFV 649
>pdb|3VLK|A Chain A, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui
pdb|3VLK|B Chain B, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui
pdb|3VLL|A Chain A, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui Complexes With
Inhibitor Sha
pdb|3VLL|B Chain B, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui Complexes With
Inhibitor Sha
Length = 737
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 116/329 (35%), Gaps = 115/329 (34%)
Query: 33 PIMLRLAWHDAGTY---DAKTRTGGPDGSIRHEQEYAHNANNGLKIAIDLCEGVKAKH-P 88
P+ +R+AWH AGTY D + G + NAN L A L +K K+
Sbjct: 88 PLFIRMAWHSAGTYRTADGRGGAAGGRQRFAPINSWPDNAN--LDKARRLLLPIKQKYGQ 145
Query: 89 RITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSES-------PEE-----------GRL 130
+I++ADL LAG VA+E G +A GR+D+ E PE+ G +
Sbjct: 146 KISWADLMILAGNVAIESMGFKTFGYAGGREDAFEEDKAVNWGPEDEFETQERFDEPGEI 205
Query: 131 ----------------------PDAAQGVSHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH 167
PD ++R F RM ++DK+ AL +GGHT G+ H
Sbjct: 206 QEGLGASVMGLIYVNPEGPDGNPDPEASAKNIRQTFDRMAMNDKETAALIAGGHTFGKVH 265
Query: 168 ----PERS--------------------------------GYEGPWTKEPLKFD------ 185
PE + G EGPWT+ P ++D
Sbjct: 266 GADDPEENLGPEPEAAPIEQQGLGWQNKNGNSKGGEMITAGIEGPWTQSPTEWDMGYINN 325
Query: 186 --------------------------NSYFVXXXXXXXXXXXXXPTDKALLEDPKFRYYV 219
NS TD AL DP +R +
Sbjct: 326 LLDYEWEPEKGPGGAWQWAPKSEELKNSVPDAHDPDEKQTPMMLTTDIALKRDPDYREVM 385
Query: 220 ELYAKDEDAFFTDYAASHKKLSELGFNPP 248
E + ++ F ++A + KL+ PP
Sbjct: 386 ETFQENPMEFGMNFAKAWYKLTHRDMGPP 414
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 33/188 (17%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGS---IRHEQEYAHNANNGLKIAIDLCEGVKAKH---- 87
+++ AW A TY + GG +G+ + ++ + N L+ + E ++ +
Sbjct: 463 LVKTAWASASTYRDSDKRGGANGARLRLEPQKNWEVNEPEQLETVLGTLENIQTEFNDSR 522
Query: 88 ---PRITYADLYQLAGVVAVEVTGGPA-----IDFAPGRKDS----SESPEEGRLPDAAQ 135
+++ ADL L G AVE A I F PGR D+ +++P L
Sbjct: 523 SDGTQVSLADLIVLGGNAAVEQAAANAGYDVEIPFEPGRVDAGPEHTDAPSFDALKPKVD 582
Query: 136 GV-SHLRDIFYR------------MGLSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPL 182
GV ++++D R + L+ ++ AL GG A+ + + G +T EP
Sbjct: 583 GVRNYIQDDITRPAEEVLVDNADLLNLTASELTALIGGMRSIGANYQDTDL-GVFTDEPE 641
Query: 183 KFDNSYFV 190
N +FV
Sbjct: 642 TLTNDFFV 649
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase.
pdb|4A5G|B Chain B, Raphanus Sativus Anionic Peroxidase
Length = 308
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 9/140 (6%)
Query: 35 MLRLAWHDAGTY--DAKTRTGGPDGSIRHEQEYAHNANN--GLKIAIDLCEGVKAKHP-R 89
++RL +HD DA GSI E+ NAN+ G + ++ ++ P
Sbjct: 38 LIRLHFHDCFVLGCDASILLDN-SGSIISEKNAGPNANSARGFNVVDNIKTALENACPGV 96
Query: 90 ITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSESPEEG---RLPDAAQGVSHLRDIFYR 146
++ D+ LA +V ++GGP+ GR+D+ + + G +P QG+S++ F
Sbjct: 97 VSCTDVLALASQASVSLSGGPSWTVDLGRRDTLTANQAGANSSIPSPTQGLSNITSKFSA 156
Query: 147 MGLSDKDIVALSGGHTLGRA 166
+GL+ D+VALSG HT GRA
Sbjct: 157 VGLNTNDLVALSGAHTFGRA 176
>pdb|2DV1|A Chain A, Crystal Structure Of D141e Mutant Of Bpkatg
pdb|2DV1|B Chain B, Crystal Structure Of D141e Mutant Of Bpkatg
Length = 748
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 76/182 (41%), Gaps = 49/182 (26%)
Query: 34 IMLRLAWHDAGTY-DAKTRTGGPDGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPR-IT 91
+ +R+AWH AGTY A R G +G R + N L A L +K K+ R I+
Sbjct: 105 LFIRMAWHSAGTYRTADGRGGAGEGQQRFAPLNSWPENANLDKARRLLWPIKQKYGRAIS 164
Query: 92 YADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE---------------------------- 123
+ADL L G VA+E G FA GR D+ E
Sbjct: 165 WADLLILTGNVALESMGFKTFGFAGGRADTWEPEDVYWGSEKIWLELSGGPNSRYSGDRQ 224
Query: 124 ---------------SPE--EGRLPDAAQGVSHLRDIFYRMGLSDKDIVAL-SGGHTLGR 165
+PE +G PD +RD F RM ++D++ VAL +GGHT G+
Sbjct: 225 LENPLAAVQMGLIYVNPEGPDGN-PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGK 283
Query: 166 AH 167
H
Sbjct: 284 TH 285
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGS---IRHEQEYAHNANNGLKIAIDLCEGVKAKH---- 87
++ AW A T+ + GG +G+ + ++++ N L ++ E ++
Sbjct: 480 LVSTAWAAASTFRGSDKRGGANGARIRLAPQKDWEANQPEQLAAVLETLEAIRTAFNGAQ 539
Query: 88 ---PRITYADLYQLAGVVAVEVTGGPA-----IDFAPGRKDSSE 123
+++ ADL LAG VE A + FAPGR D+S+
Sbjct: 540 RGGKQVSLADLIVLAGCAGVEQAAKNAGHAVTVPFAPGRADASQ 583
>pdb|1MWV|A Chain A, Crystal Structure Of Catalase-peroxidase Katg Of
Burkholderia Pseudomallei
pdb|1MWV|B Chain B, Crystal Structure Of Catalase-peroxidase Katg Of
Burkholderia Pseudomallei
pdb|2B2O|A Chain A, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph8.0
pdb|2B2O|B Chain B, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph8.0
pdb|2B2Q|A Chain A, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph7.5
pdb|2B2Q|B Chain B, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph7.5
pdb|2B2R|A Chain A, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph5.6
pdb|2B2R|B Chain B, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph5.6
pdb|2B2S|A Chain A, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph7.5
pdb|2B2S|B Chain B, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph7.5
Length = 714
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 76/182 (41%), Gaps = 49/182 (26%)
Query: 34 IMLRLAWHDAGTY-DAKTRTGGPDGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPR-IT 91
+ +R+AWH AGTY A R G +G R + N L A L +K K+ R I+
Sbjct: 71 LFIRMAWHSAGTYRTADGRGGAGEGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGRAIS 130
Query: 92 YADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE---------------------------- 123
+ADL L G VA+E G FA GR D+ E
Sbjct: 131 WADLLILTGNVALESMGFKTFGFAGGRADTWEPEDVYWGSEKIWLELSGGPNSRYSGDRQ 190
Query: 124 ---------------SPE--EGRLPDAAQGVSHLRDIFYRMGLSDKDIVAL-SGGHTLGR 165
+PE +G PD +RD F RM ++D++ VAL +GGHT G+
Sbjct: 191 LENPLAAVQMGLIYVNPEGPDGN-PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGK 249
Query: 166 AH 167
H
Sbjct: 250 TH 251
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGS---IRHEQEYAHNANNGLKIAIDLCEGVKAKH---- 87
++ AW A T+ + GG +G+ + ++++ N L ++ E ++
Sbjct: 446 LVSTAWAAASTFRGSDKRGGANGARIRLAPQKDWEANQPEQLAAVLETLEAIRTAFNGAQ 505
Query: 88 ---PRITYADLYQLAGVVAVEVTGGPA-----IDFAPGRKDSSE 123
+++ ADL LAG VE A + FAPGR D+S+
Sbjct: 506 RGGKQVSLADLIVLAGCAGVEQAAKNAGHAVTVPFAPGRADASQ 549
>pdb|3VLM|A Chain A, Crystal Structure Analysis Of The Met244ala Variant Of
Katg From Haloarcula Marismortui
pdb|3VLM|B Chain B, Crystal Structure Analysis Of The Met244ala Variant Of
Katg From Haloarcula Marismortui
Length = 737
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 115/329 (34%), Gaps = 115/329 (34%)
Query: 33 PIMLRLAWHDAGTY---DAKTRTGGPDGSIRHEQEYAHNANNGLKIAIDLCEGVKAKH-P 88
P+ +R+AWH AGTY D + G + NAN L A L +K K+
Sbjct: 88 PLFIRMAWHSAGTYRTADGRGGAAGGRQRFAPINSWPDNAN--LDKARRLLLPIKQKYGQ 145
Query: 89 RITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSES-------PEE-----------GRL 130
+I++ADL LAG VA+E G +A GR+D+ E PE+ G +
Sbjct: 146 KISWADLMILAGNVAIESMGFKTFGYAGGREDAFEEDKAVNWGPEDEFETQERFDEPGEI 205
Query: 131 ----------------------PDAAQGVSHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH 167
PD ++R F R ++DK+ AL +GGHT G+ H
Sbjct: 206 QEGLGASVMGLIYVNPEGPDGNPDPEASAKNIRQTFDRAAMNDKETAALIAGGHTFGKVH 265
Query: 168 ----PER--------------------------------SGYEGPWTKEPLKFD------ 185
PE SG EGPWT+ P ++D
Sbjct: 266 GADDPEENLGPEPEAAPIEQQGLGWQNKNGNSKGGEMITSGIEGPWTQSPTEWDMGYINN 325
Query: 186 --------------------------NSYFVXXXXXXXXXXXXXPTDKALLEDPKFRYYV 219
NS TD AL DP +R +
Sbjct: 326 LLDYEWEPEKGPGGAWQWAPKSEELKNSVPDAHDPDEKQTPMMLTTDIALKRDPDYREVM 385
Query: 220 ELYAKDEDAFFTDYAASHKKLSELGFNPP 248
E + ++ F ++A + KL+ PP
Sbjct: 386 ETFQENPMEFGMNFAKAWYKLTHRDMGPP 414
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 33/188 (17%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGS---IRHEQEYAHNANNGLKIAIDLCEGVKAKH---- 87
+++ AW A TY + GG +G+ + ++ + N L+ + E ++ +
Sbjct: 463 LVKTAWASASTYRDSDKRGGANGARLRLEPQKNWEVNEPEQLETVLGTLENIQTEFNDSR 522
Query: 88 ---PRITYADLYQLAGVVAVEVTGGPA-----IDFAPGRKDS----SESPEEGRLPDAAQ 135
+++ ADL L G AVE A I F PGR D+ +++P L
Sbjct: 523 SDGTQVSLADLIVLGGNAAVEQAAANAGYDVEIPFEPGRVDAGPEHTDAPSFDALKPKVD 582
Query: 136 GV-SHLRDIFYR------------MGLSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPL 182
GV ++++D R + L+ ++ AL GG A+ + + G +T EP
Sbjct: 583 GVRNYIQDDITRPAEEVLVDNADLLNLTASELTALIGGMRSIGANYQDTDL-GVFTDEPE 641
Query: 183 KFDNSYFV 190
N +FV
Sbjct: 642 TLTNDFFV 649
>pdb|1UB2|A Chain A, Crystal Structure Of Catalase-Peroxidase From
Synechococcus Pcc 7942
Length = 720
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 88/239 (36%), Gaps = 83/239 (34%)
Query: 34 IMLRLAWHDAGTYD-AKTRTGGPDGSIRHEQEYAHNANNGLKIAIDLCEGVKAKH-PRIT 91
+M+RL WH AGTY A R G G+ R + N L A L +K K+ +++
Sbjct: 87 LMIRLTWHAAGTYRIADGRGGAGTGNQRFAPLNSWPDNTNLDKARRLLWPIKQKYGNKLS 146
Query: 92 YADLYQLAGVVAVEVTGGPAIDFAPGR-------KDSSESPEEGRL-------------- 130
+ADL AG +A E G FA GR KD PE+
Sbjct: 147 WADLIAYAGTIAYESMGLKTFGFAFGREDIWHPEKDIYWGPEKEWFPPSTNPNSRYTGDR 206
Query: 131 ------------------------PDAAQGVSHLRDIFYRMGLSDKDIVALS-GGHTLGR 165
PD + +R F RM ++D++ VAL+ GGHT+G+
Sbjct: 207 ELENPLAAVTMGLIYVNPEGVDGNPDPLKTAHDVRVTFARMAMNDEETVALTAGGHTVGK 266
Query: 166 AH---------PE--------------------------RSGYEGPWTKEPLKFDNSYF 189
H PE SG EG WT P ++DN YF
Sbjct: 267 CHGNGNAALLGPEPEGADVEDQGLGWINKTQSGIGRNAVTSGLEGAWTPHPTQWDNGYF 325
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGS---IRHEQEYAHNANNGLKIAIDLCEGVKAKHPRIT 91
++ AW A TY + GG +G+ + ++++ N + L + + EG+ A T
Sbjct: 462 LVSTAWDSARTYRNSDKRGGANGARIRLAPQKDWEGNEPDRLPKVLAVLEGISAAT-GAT 520
Query: 92 YADLYQLAGVVAVEVTGGPA-----IDFAPGRKDSS 122
AD+ LAG V VE A + FAPGR D++
Sbjct: 521 VADVIVLAGNVGVEQKARAAGVEIVLPFAPGRGDAT 556
>pdb|1X7U|A Chain A, Crystal Structure Of The S324t Of Catalase-Peroxidase Katg
pdb|1X7U|B Chain B, Crystal Structure Of The S324t Of Catalase-Peroxidase Katg
Length = 748
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 76/182 (41%), Gaps = 49/182 (26%)
Query: 34 IMLRLAWHDAGTY-DAKTRTGGPDGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPR-IT 91
+ +R+AWH AGTY A R G +G R + N L A L +K K+ R I+
Sbjct: 105 LFIRMAWHSAGTYRTADGRGGAGEGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGRAIS 164
Query: 92 YADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE---------------------------- 123
+ADL L G VA+E G FA GR D+ E
Sbjct: 165 WADLLILTGNVALESMGFKTFGFAGGRADTWEPEDVYWGSEKIWLELSGGPNSRYSGDRQ 224
Query: 124 ---------------SPE--EGRLPDAAQGVSHLRDIFYRMGLSDKDIVAL-SGGHTLGR 165
+PE +G PD +RD F RM ++D++ VAL +GGHT G+
Sbjct: 225 LENPLAAVQMGLIYVNPEGPDGN-PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGK 283
Query: 166 AH 167
H
Sbjct: 284 TH 285
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGS---IRHEQEYAHNANNGLKIAIDLCEGVKAKH---- 87
++ AW A T+ + GG +G+ + ++++ N L ++ E ++
Sbjct: 480 LVSTAWAAASTFRGSDKRGGANGARIRLAPQKDWEANQPEQLAAVLETLEAIRTAFNGAQ 539
Query: 88 ---PRITYADLYQLAGVVAVEVTGGPA-----IDFAPGRKDSSE 123
+++ ADL LAG VE A + FAPGR D+S+
Sbjct: 540 RGGKQVSLADLIVLAGCAGVEQAAKNAGHAVTVPFAPGRADASQ 583
>pdb|3N3S|A Chain A, Crystal Structure Of The E198a Variant Of Burkholderia
Pseudomallei Catalase-Peroxidase Katg With Inh
pdb|3N3S|B Chain B, Crystal Structure Of The E198a Variant Of Burkholderia
Pseudomallei Catalase-Peroxidase Katg With Inh
Length = 748
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 76/182 (41%), Gaps = 49/182 (26%)
Query: 34 IMLRLAWHDAGTY-DAKTRTGGPDGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPR-IT 91
+ +R+AWH AGTY A R G +G R + N L A L +K K+ R I+
Sbjct: 105 LFIRMAWHSAGTYRTADGRGGAGEGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGRAIS 164
Query: 92 YADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE---------------------------- 123
+ADL L G VA+E G FA GR D+ E
Sbjct: 165 WADLLILTGNVALESMGFKTFGFAGGRADTWEPADVYWGSEKIWLELSGGPNSRYSGDRQ 224
Query: 124 ---------------SPE--EGRLPDAAQGVSHLRDIFYRMGLSDKDIVAL-SGGHTLGR 165
+PE +G PD +RD F RM ++D++ VAL +GGHT G+
Sbjct: 225 LENPLAAVQMGLIYVNPEGPDGN-PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGK 283
Query: 166 AH 167
H
Sbjct: 284 TH 285
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGS---IRHEQEYAHNANNGLKIAIDLCEGVKAKH---- 87
++ AW A T+ + GG +G+ + ++++ N L ++ E ++
Sbjct: 480 LVSTAWAAASTFRGSDKRGGANGARIRLAPQKDWEANQPEQLAAVLETLEAIRTAFNGAQ 539
Query: 88 ---PRITYADLYQLAGVVAVEVTGGPA-----IDFAPGRKDSSE 123
+++ ADL LAG VE A + FAPGR D+S+
Sbjct: 540 RGGKQVSLADLIVLAGCAGVEQAAKNAGHAVTVPFAPGRADASQ 583
>pdb|3N3Q|A Chain A, Crystal Structure Of The S324t Variant Of Burkholderia
Pseudomallei Katg With Isonicotinic Acid Hydrazide Bound
pdb|3N3Q|B Chain B, Crystal Structure Of The S324t Variant Of Burkholderia
Pseudomallei Katg With Isonicotinic Acid Hydrazide Bound
Length = 748
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 76/182 (41%), Gaps = 49/182 (26%)
Query: 34 IMLRLAWHDAGTY-DAKTRTGGPDGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPR-IT 91
+ +R+AWH AGTY A R G +G R + N L A L +K K+ R I+
Sbjct: 105 LFIRMAWHSAGTYRTADGRGGAGEGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGRAIS 164
Query: 92 YADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE---------------------------- 123
+ADL L G VA+E G FA GR D+ E
Sbjct: 165 WADLLILTGNVALESMGFKTFGFAGGRADTWEPEDVYWGSEKIWLELSGGPNSRYSGDRQ 224
Query: 124 ---------------SPE--EGRLPDAAQGVSHLRDIFYRMGLSDKDIVAL-SGGHTLGR 165
+PE +G PD +RD F RM ++D++ VAL +GGHT G+
Sbjct: 225 LENPLAAVQMGLIYVNPEGPDGN-PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGK 283
Query: 166 AH 167
H
Sbjct: 284 TH 285
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGS---IRHEQEYAHNANNGLKIAIDLCEGVKAKH---- 87
++ AW A T+ + GG +G+ + ++++ N L ++ E ++
Sbjct: 480 LVSTAWAAASTFRGSDKRGGANGARIRLAPQKDWEANQPEQLAAVLETLEAIRTAFNGAQ 539
Query: 88 ---PRITYADLYQLAGVVAVEVTGGPA-----IDFAPGRKDSSE 123
+++ ADL LAG VE A + FAPGR D+S+
Sbjct: 540 RGGKQVSLADLIVLAGCAGVEQAAKNAGHAVTVPFAPGRADASQ 583
>pdb|2FXG|A Chain A, Crystal Structure Of Katg At Ph 4.5
pdb|2FXG|B Chain B, Crystal Structure Of Katg At Ph 4.5
pdb|2FXH|A Chain A, Crystal Structure Of Katg At Ph 6.5
pdb|2FXH|B Chain B, Crystal Structure Of Katg At Ph 6.5
pdb|3N3N|A Chain A, Crystal Structure Of B. Pseudomallei Katg With
Isonicotinic Acid Hydrazide Bound
pdb|3N3N|B Chain B, Crystal Structure Of B. Pseudomallei Katg With
Isonicotinic Acid Hydrazide Bound
pdb|3N3P|A Chain A, Crystal Structure Of Catalase-Peroxidase Katg With
Isonicotinic Acid Hydrazide And Amp Bound
pdb|3N3P|B Chain B, Crystal Structure Of Catalase-Peroxidase Katg With
Isonicotinic Acid Hydrazide And Amp Bound
Length = 748
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 76/182 (41%), Gaps = 49/182 (26%)
Query: 34 IMLRLAWHDAGTY-DAKTRTGGPDGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPR-IT 91
+ +R+AWH AGTY A R G +G R + N L A L +K K+ R I+
Sbjct: 105 LFIRMAWHSAGTYRTADGRGGAGEGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGRAIS 164
Query: 92 YADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE---------------------------- 123
+ADL L G VA+E G FA GR D+ E
Sbjct: 165 WADLLILTGNVALESMGFKTFGFAGGRADTWEPEDVYWGSEKIWLELSGGPNSRYSGDRQ 224
Query: 124 ---------------SPE--EGRLPDAAQGVSHLRDIFYRMGLSDKDIVAL-SGGHTLGR 165
+PE +G PD +RD F RM ++D++ VAL +GGHT G+
Sbjct: 225 LENPLAAVQMGLIYVNPEGPDGN-PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGK 283
Query: 166 AH 167
H
Sbjct: 284 TH 285
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGS---IRHEQEYAHNANNGLKIAIDLCEGVKAKH---- 87
++ AW A T+ + GG +G+ + ++++ N L ++ E ++
Sbjct: 480 LVSTAWAAASTFRGSDKRGGANGARIRLAPQKDWEANQPEQLAAVLETLEAIRTAFNGAQ 539
Query: 88 ---PRITYADLYQLAGVVAVEVTGGPA-----IDFAPGRKDSSE 123
+++ ADL LAG VE A + FAPGR D+S+
Sbjct: 540 RGGKQVSLADLIVLAGCAGVEQAAKNAGHAVTVPFAPGRADASQ 583
>pdb|1MN1|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant D179n
Length = 357
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Query: 35 MLRLAWHDAGTYDAKTRTGGP------DGSIR--HEQEYAHNANNGLKIAIDLCEGVKAK 86
++RL +HDA A +R+ GP DGS+ E +ANNG+ +++ K
Sbjct: 40 VIRLTFHDA---IAISRSQGPKAGGGADGSMLLFPTVEPNFSANNGIDDSVNNLIPFMQK 96
Query: 87 HPRITYADLYQLAGVVAVE-VTGGPAIDFAPGRKDSSESPEEGRLPDAAQGVSHLRDIFY 145
H I+ ADL Q AG VA+ G P ++F GR + + + +G +P+ V+ + F
Sbjct: 97 HNTISAADLVQFAGAVALSNCPGAPRLEFLAGRPNKTIAAVDGLIPEPQDSVTKILQRFE 156
Query: 146 RM-GLSDKDIVALSGGHTLGRAHP-ERSGYEGPWTKEPLKFDNSYFV 190
G + ++V+L H++ RA+ +++ P+ P FD F+
Sbjct: 157 DAGGFTPFEVVSLLASHSVARANKVDQTIDAAPFDSTPFTFDTQVFL 203
>pdb|1MN2|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant E35q,
D179n
Length = 357
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Query: 35 MLRLAWHDAGTYDAKTRTGGP------DGSIR--HEQEYAHNANNGLKIAIDLCEGVKAK 86
++RL +HDA A +R+ GP DGS+ E +ANNG+ +++ K
Sbjct: 40 VIRLTFHDA---IAISRSQGPKAGGGADGSMLLFPTVEPNFSANNGIDDSVNNLIPFMQK 96
Query: 87 HPRITYADLYQLAGVVAVE-VTGGPAIDFAPGRKDSSESPEEGRLPDAAQGVSHLRDIFY 145
H I+ ADL Q AG VA+ G P ++F GR + + + +G +P+ V+ + F
Sbjct: 97 HNTISAADLVQFAGAVALSNCPGAPRLEFLAGRPNKTIAAVDGLIPEPQDSVTKILQRFE 156
Query: 146 RM-GLSDKDIVALSGGHTLGRAHP-ERSGYEGPWTKEPLKFDNSYFV 190
G + ++V+L H++ RA+ +++ P+ P FD F+
Sbjct: 157 DAGGFTPFEVVSLLASHSVARANKVDQTIDAAPFDSTPFTFDTQVFL 203
>pdb|1YYD|A Chain A, High Resolution Crystal Structure Of Manganese Peroxidase
pdb|1YYG|A Chain A, Manganese Peroxidase Complexed With Cd(Ii) Inhibitor
pdb|1YZP|A Chain A, Substrate-free Manganese Peroxidase
pdb|1YZR|A Chain A, Manganese Peroxidase-Sm(Iii) Complex
pdb|1MNP|A Chain A, Manganese Peroxidase
pdb|3M5Q|A Chain A, 0.93 A Structure Of Manganese-Bound Manganese Peroxidase
pdb|3M8M|A Chain A, 1.05 A Structure Of Manganese-Free Manganese Peroxidase
Length = 357
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 14/167 (8%)
Query: 35 MLRLAWHDAGTYDAKTRTGGP------DGSIR--HEQEYAHNANNGLKIAIDLCEGVKAK 86
++RL +HDA A +R+ GP DGS+ E +ANNG+ +++ K
Sbjct: 40 VIRLTFHDA---IAISRSQGPKAGGGADGSMLLFPTVEPNFSANNGIDDSVNNLIPFMQK 96
Query: 87 HPRITYADLYQLAGVVAVE-VTGGPAIDFAPGRKDSSESPEEGRLPDAAQGVSHLRDIFY 145
H I+ ADL Q AG VA+ G P ++F GR + + + +G +P+ V+ + F
Sbjct: 97 HNTISAADLVQFAGAVALSNCPGAPRLEFLAGRPNKTIAAVDGLIPEPQDSVTKILQRFE 156
Query: 146 RM-GLSDKDIVALSGGHTLGRAHP-ERSGYEGPWTKEPLKFDNSYFV 190
G + ++V+L H++ RA +++ P+ P FD F+
Sbjct: 157 DAGGFTPFEVVSLLASHSVARADKVDQTIDAAPFDSTPFTFDTQVFL 203
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase
pdb|1FHF|B Chain B, The Structure Of Soybean Peroxidase
pdb|1FHF|C Chain C, The Structure Of Soybean Peroxidase
Length = 304
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 35 MLRLAWHDAGT--YDAKTRTGGPDGSIRHEQEYAHNANN--GLKIAIDLCEGVKAKHP-R 89
++RL +HD D D +I EQ+ N N+ GL + D+ V+ P
Sbjct: 36 LMRLHFHDCFVQGCDGSVLLNNTD-TIESEQDALPNINSIRGLDVVNDIKTAVENSCPDT 94
Query: 90 ITYADLYQLAGVVAVEVTGGPAIDFAPGRKDS---SESPEEGRLPDAAQGVSHLRDIFYR 146
++ AD+ +A +A + GGP GR+DS + + LP ++ L+ F
Sbjct: 95 VSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAV 154
Query: 147 MGLSDKDIVALSGGHTLGRAH 167
GL+ D+V LSGGHT GRA
Sbjct: 155 QGLNTLDLVTLSGGHTFGRAR 175
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln
Length = 309
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 22/146 (15%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGSI--------RHEQEYAHNANN--GLKIAIDLCEGVK 84
+LRL +HD G D SI R E++ NAN+ G + + V+
Sbjct: 37 ILRLHFHDCFV-------NGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVE 89
Query: 85 AKHPR-ITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSES---PEEGRLPDAAQGVSHL 140
+ PR ++ ADL +A +V + GGP+ GR+DS ++ LP + L
Sbjct: 90 SACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPQPFFTLPQL 149
Query: 141 RDIFYRMGLS-DKDIVALSGGHTLGR 165
+D F +GL+ D+VALSGGHT G+
Sbjct: 150 KDSFRNVGLNRSSDLVALSGGHTFGK 175
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2
pdb|1QO4|A Chain A, Arabidopsis Thaliana Peroxidase A2 At Room Temperature
Length = 306
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPD-GSIRHEQEYAHNANN--GLKIAIDLCEGVKAKHP-RI 90
++RL +HD D GSI+ E+ N N+ G + ++ ++ P +
Sbjct: 37 LIRLHFHDCFVNGCDASILLDDTGSIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVV 96
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSESPEEG---RLPDAAQGVSHLRDIFYRM 147
+ +D+ LA +V + GGP+ GR+DS + G +P + +S++ F +
Sbjct: 97 SCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAV 156
Query: 148 GLSDKDIVALSGGHTLGRAH 167
GL+ D+VALSG HT GRA
Sbjct: 157 GLNTNDLVALSGAHTFGRAR 176
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
pdb|2ATJ|B Chain B, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
Length = 308
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 22/146 (15%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGSI--------RHEQEYAHNANN--GLKIAIDLCEGVK 84
+LRL +HD G D SI R E++ NAN+ G + + V+
Sbjct: 37 ILRLHFHDCFV-------NGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVE 89
Query: 85 AKHPR-ITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSES---PEEGRLPDAAQGVSHL 140
+ PR ++ ADL +A +V + GGP+ GR+DS ++ LP + L
Sbjct: 90 SACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQL 149
Query: 141 RDIFYRMGLS-DKDIVALSGGHTLGR 165
+D F +GL+ D+VALSGGHT G+
Sbjct: 150 KDSFRNVGLNRSSDLVALSGGHTFGK 175
>pdb|2DV2|A Chain A, Crystal Structure Of D141e Mutant Of Bpkatg At Ph 8.0
pdb|2DV2|B Chain B, Crystal Structure Of D141e Mutant Of Bpkatg At Ph 8.0
Length = 748
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 75/182 (41%), Gaps = 49/182 (26%)
Query: 34 IMLRLAWHDAGTY-DAKTRTGGPDGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPR-IT 91
+ +R+A H AGTY A R G +G R + N L A L +K K+ R I+
Sbjct: 105 LFIRMAXHSAGTYRTADGRGGAGEGQQRFAPLNSWPENANLDKARRLLWPIKQKYGRAIS 164
Query: 92 YADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE---------------------------- 123
+ADL L G VA+E G FA GR D+ E
Sbjct: 165 WADLLILTGNVALESMGFKTFGFAGGRADTWEPEDVYWGSEKIWLELSGGPNSRYSGDRQ 224
Query: 124 ---------------SPE--EGRLPDAAQGVSHLRDIFYRMGLSDKDIVAL-SGGHTLGR 165
+PE +G PD +RD F RM ++D++ VAL +GGHT G+
Sbjct: 225 LENPLAAVQMGLIYVNPEGPDGN-PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGK 283
Query: 166 AH 167
H
Sbjct: 284 TH 285
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGS---IRHEQEYAHNANNGLKIAIDLCEGVKAKH---- 87
++ AW A T+ + GG +G+ + ++++ N L ++ E ++
Sbjct: 480 LVSTAWAAASTFRGSDKRGGANGARIRLAPQKDWEANQPEQLAAVLETLEAIRTAFNGAQ 539
Query: 88 ---PRITYADLYQLAGVVAVEVTGGPA-----IDFAPGRKDSSE 123
+++ ADL LAG VE A + FAPGR D+S+
Sbjct: 540 RGGKQVSLADLIVLAGCAGVEQAAKNAGHAVTVPFAPGRADASQ 583
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|B Chain B, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|C Chain C, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|D Chain D, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|E Chain E, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|F Chain F, Recombinant Horseradish Peroxidase C1a
pdb|1HCH|A Chain A, Structure Of Horseradish Peroxidase C1a Compound I
Length = 306
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 22/146 (15%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGSI--------RHEQEYAHNANN--GLKIAIDLCEGVK 84
+LRL +HD G D SI R E++ NAN+ G + + V+
Sbjct: 36 ILRLHFHDCFV-------NGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVE 88
Query: 85 AKHPR-ITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSES---PEEGRLPDAAQGVSHL 140
+ PR ++ ADL +A +V + GGP+ GR+DS ++ LP + L
Sbjct: 89 SACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQL 148
Query: 141 RDIFYRMGLS-DKDIVALSGGHTLGR 165
+D F +GL+ D+VALSGGHT G+
Sbjct: 149 KDSFRNVGLNRSSDLVALSGGHTFGK 174
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly
Length = 309
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 22/146 (15%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGSI--------RHEQEYAHNANN--GLKIAIDLCEGVK 84
+LRL +HD G D SI R E++ NAN+ G + + V+
Sbjct: 37 ILRLHFHDCFV-------NGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVE 89
Query: 85 AKHPR-ITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSES---PEEGRLPDAAQGVSHL 140
+ PR ++ ADL +A +V + GGP+ GR+DS ++ LP + L
Sbjct: 90 SACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPGPFFTLPQL 149
Query: 141 RDIFYRMGLS-DKDIVALSGGHTLGR 165
+D F +GL+ D+VALSGGHT G+
Sbjct: 150 KDSFRNVGLNRSSDLVALSGGHTFGK 175
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic
Acid
pdb|7ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Complex With
Cyanide And Ferulic Acid
pdb|1H5D|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-11% Dose)
pdb|1H5E|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (11-22% Dose)
pdb|1H5F|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (22-33% Dose)
pdb|1H5G|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (33-44% Dose)
pdb|1H5I|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (56-67% Dose)
pdb|1H5J|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (67-78% Dose)
pdb|1H5K|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (78-89% Dose)
pdb|1H5M|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-100% Dose)
pdb|1H55|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Ii
pdb|1H57|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Iii
pdb|1H58|A Chain A, Structure Of Ferrous Horseradish Peroxidase C1a
pdb|1H5A|A Chain A, Structure Of Ferric Horseradish Peroxidase C1a In Complex
With Acetate
pdb|1H5C|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (100-200% Dose)
pdb|1H5H|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (44-56% Dose)
pdb|1H5L|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (89-100% Dose)
Length = 308
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 22/146 (15%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGSI--------RHEQEYAHNANN--GLKIAIDLCEGVK 84
+LRL +HD G D SI R E++ NAN+ G + + V+
Sbjct: 36 ILRLHFHDCFV-------NGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVE 88
Query: 85 AKHPR-ITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSES---PEEGRLPDAAQGVSHL 140
+ PR ++ ADL +A +V + GGP+ GR+DS ++ LP + L
Sbjct: 89 SACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQL 148
Query: 141 RDIFYRMGLS-DKDIVALSGGHTLGR 165
+D F +GL+ D+VALSGGHT G+
Sbjct: 149 KDSFRNVGLNRSSDLVALSGGHTFGK 174
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|3ATJ|B Chain B, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|1GWT|A Chain A, Recombinant Horseradish Peroxidase C1a Phe221met
Length = 309
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 22/146 (15%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGSI--------RHEQEYAHNANN--GLKIAIDLCEGVK 84
+LRL +HD G D SI R E++ NAN+ G + + V+
Sbjct: 37 ILRLHFHDCFV-------NGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVE 89
Query: 85 AKHPR-ITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSES---PEEGRLPDAAQGVSHL 140
+ PR ++ ADL +A +V + GGP+ GR+DS ++ LP + L
Sbjct: 90 SACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQL 149
Query: 141 RDIFYRMGLS-DKDIVALSGGHTLGR 165
+D F +GL+ D+VALSGGHT G+
Sbjct: 150 KDSFRNVGLNRSSDLVALSGGHTFGK 175
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
pdb|1GX2|B Chain B, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
Length = 309
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 22/146 (15%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGSI--------RHEQEYAHNANN--GLKIAIDLCEGVK 84
+LRL +HD G D SI R E++ NAN+ G + + V+
Sbjct: 37 ILRLHFHDCFV-------NGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVE 89
Query: 85 AKHPR-ITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSES---PEEGRLPDAAQGVSHL 140
+ PR ++ ADL +A +V + GGP+ GR+DS ++ LP + L
Sbjct: 90 SACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQL 149
Query: 141 RDIFYRMGLS-DKDIVALSGGHTLGR 165
+D F +GL+ D+VALSGGHT G+
Sbjct: 150 KDSFRNVGLNRSSDLVALSGGHTFGK 175
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate
pdb|1W4Y|A Chain A, Ferrous Horseradish Peroxidase C1a In Complex With Carbon
Monoxide
Length = 323
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 22/146 (15%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGSI--------RHEQEYAHNANN--GLKIAIDLCEGVK 84
+LRL +HD G D SI R E++ NAN+ G + + V+
Sbjct: 36 ILRLHFHDCFV-------NGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVE 88
Query: 85 AKHPR-ITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSES---PEEGRLPDAAQGVSHL 140
+ PR ++ ADL +A +V + GGP+ GR+DS ++ LP + L
Sbjct: 89 SACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQL 148
Query: 141 RDIFYRMGLS-DKDIVALSGGHTLGR 165
+D F +GL+ D+VALSGGHT G+
Sbjct: 149 KDSFRNVGLNRSSDLVALSGGHTFGK 174
>pdb|3N3R|A Chain A, Crystal Structure Of The E198a Variant Of
Catalase-Peroxidase Katg Of Burkholderia Pseudomallei
pdb|3N3R|B Chain B, Crystal Structure Of The E198a Variant Of
Catalase-Peroxidase Katg Of Burkholderia Pseudomallei
Length = 748
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 75/182 (41%), Gaps = 49/182 (26%)
Query: 34 IMLRLAWHDAGTY-DAKTRTGGPDGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPR-IT 91
+ +R+A H AGTY A R G +G R + N L A L +K K+ R I+
Sbjct: 105 LFIRMAXHSAGTYRTADGRGGAGEGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGRAIS 164
Query: 92 YADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE---------------------------- 123
+ADL L G VA+E G FA GR D+ E
Sbjct: 165 WADLLILTGNVALESMGFKTFGFAGGRADTWEPADVYWGSEKIWLELSGGPNSRYSGDRQ 224
Query: 124 ---------------SPE--EGRLPDAAQGVSHLRDIFYRMGLSDKDIVAL-SGGHTLGR 165
+PE +G PD +RD F RM ++D++ VAL +GGHT G+
Sbjct: 225 LENPLAAVQMGLIYVNPEGPDGN-PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGK 283
Query: 166 AH 167
H
Sbjct: 284 TH 285
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGS---IRHEQEYAHNANNGLKIAIDLCEGVKAKH---- 87
++ AW A T+ + GG +G+ + ++++ N L ++ E ++
Sbjct: 480 LVSTAWAAASTFRGSDKRGGANGARIRLAPQKDWEANQPEQLAAVLETLEAIRTAFNGAQ 539
Query: 88 ---PRITYADLYQLAGVVAVEVTGGPA-----IDFAPGRKDSSE 123
+++ ADL LAG VE A + FAPGR D+S+
Sbjct: 540 RGGKQVSLADLIVLAGCAGVEQAAKNAGHAVTVPFAPGRADASQ 583
>pdb|2FXJ|A Chain A, Crystal Structure Of Katg At Ph 8.5
pdb|2FXJ|B Chain B, Crystal Structure Of Katg At Ph 8.5
pdb|3N3O|A Chain A, Crystal Structure Of Burkholderia Pseudomallei Katg With
Nad Bound
pdb|3N3O|B Chain B, Crystal Structure Of Burkholderia Pseudomallei Katg With
Nad Bound
Length = 748
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 75/182 (41%), Gaps = 49/182 (26%)
Query: 34 IMLRLAWHDAGTY-DAKTRTGGPDGSIRHEQEYAHNANNGLKIAIDLCEGVKAKHPR-IT 91
+ +R+A H AGTY A R G +G R + N L A L +K K+ R I+
Sbjct: 105 LFIRMAXHSAGTYRTADGRGGAGEGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGRAIS 164
Query: 92 YADLYQLAGVVAVEVTGGPAIDFAPGRKDSSE---------------------------- 123
+ADL L G VA+E G FA GR D+ E
Sbjct: 165 WADLLILTGNVALESMGFKTFGFAGGRADTWEPEDVYWGSEKIWLELSGGPNSRYSGDRQ 224
Query: 124 ---------------SPE--EGRLPDAAQGVSHLRDIFYRMGLSDKDIVAL-SGGHTLGR 165
+PE +G PD +RD F RM ++D++ VAL +GGHT G+
Sbjct: 225 LENPLAAVQMGLIYVNPEGPDGN-PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGK 283
Query: 166 AH 167
H
Sbjct: 284 TH 285
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGS---IRHEQEYAHNANNGLKIAIDLCEGVKAKH---- 87
++ AW A T+ + GG +G+ + ++++ N L ++ E ++
Sbjct: 480 LVSTAWAAASTFRGSDKRGGANGARIRLAPQKDWEANQPEQLAAVLETLEAIRTAFNGAQ 539
Query: 88 ---PRITYADLYQLAGVVAVEVTGGPA-----IDFAPGRKDSSE 123
+++ ADL LAG VE A + FAPGR D+S+
Sbjct: 540 RGGKQVSLADLIVLAGCAGVEQAAKNAGHAVTVPFAPGRADASQ 583
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In
Complex With Ferulic Acid
Length = 308
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 22/146 (15%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGSI--------RHEQEYAHNANN--GLKIAIDLCEGVK 84
+LRL +HD G D SI R E++ NAN+ G + + V+
Sbjct: 36 ILRLHFHDCFV-------NGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVE 88
Query: 85 AKHPR-ITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSES---PEEGRLPDAAQGVSHL 140
+ PR ++ ADL +A +V + GGP+ GR+DS ++ LP + L
Sbjct: 89 SACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQL 148
Query: 141 RDIFYRMGLS-DKDIVALSGGHTLGR 165
+D F +GL+ D+VALSGGH+ G+
Sbjct: 149 KDSFRNVGLNRSSDLVALSGGHSFGK 174
>pdb|4FEF|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 315
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 70/162 (43%), Gaps = 11/162 (6%)
Query: 36 LRLAWHDAGTYDAKTRTGGPDGSIRHEQEYAHN--ANNGLKIAIDLCEGVKAKHPRITYA 93
LRL +HDA + GG DGSI N AN G+ + + AKH I+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKH-NISAG 100
Query: 94 DLYQLAGVVAVE-VTGGPAIDFAPGRKDSSESPEEGRLPDAAQGVSHLRDIFYRM---GL 149
D Q AG V V GG I F GR D+ + + +P +G + I RM G
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVP---EGFDSVDSILARMGDAGF 157
Query: 150 SDKDIVALSGGHTLGRAHPERSGYEG-PWTKEPLKFDNSYFV 190
S ++V L H++ A G P+ P FD+ +F+
Sbjct: 158 SPVEVVWLLASHSIAAADKVDPSIPGTPFDSTPEVFDSQFFI 199
>pdb|3FMU|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 5/159 (3%)
Query: 36 LRLAWHDAGTYDAKTRTGGPDGSIRHEQEYAHN--ANNGLKIAIDLCEGVKAKHPRITYA 93
LRL +HDA + GG DGSI N AN G+ + + AKH I+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKH-NISAG 100
Query: 94 DLYQLAGVVAVE-VTGGPAIDFAPGRKDSSESPEEGRLPDAAQGVSHLRDIFYRMGLSDK 152
D Q AG V V GG I F GR D+ + + +P+ V + G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMGDAGFSPV 160
Query: 153 DIVALSGGHTLGRAHPERSGYEG-PWTKEPLKFDNSYFV 190
++V+L H++ A G P+ P FD+ +F+
Sbjct: 161 EVVSLLASHSIAAADKVDPSIPGTPFDSTPGVFDSQFFI 199
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant
Horseradish Peroxidase C (hrp C)
Length = 308
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 58 SIRHEQEYAHNANN--GLKIAIDLCEGVKAKHPR-ITYADLYQLAGVVAVEVTGGPAIDF 114
S R E++ NAN+ G + + V++ PR ++ ADL +A +V + GGP+
Sbjct: 60 SFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 119
Query: 115 APGRKDSSES---PEEGRLPDAAQGVSHLRDIFYRMGLS-DKDIVALSGGHTLGRAH 167
GR+DS ++ LP + L+D F +GL+ D+VALSGGHT G+
Sbjct: 120 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQ 176
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
pdb|4ATJ|B Chain B, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
Length = 309
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 58 SIRHEQEYAHNANN--GLKIAIDLCEGVKAKHPR-ITYADLYQLAGVVAVEVTGGPAIDF 114
S R E++ NAN+ G + + V++ PR ++ ADL +A +V + GGP+
Sbjct: 61 SFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 120
Query: 115 APGRKDSSES---PEEGRLPDAAQGVSHLRDIFYRMGLS-DKDIVALSGGHTLGRAH 167
GR+DS ++ LP + L+D F +GL+ D+VALSGGHT G+
Sbjct: 121 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQ 177
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y
Length = 306
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 70/146 (47%), Gaps = 22/146 (15%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGSI--------RHEQEYAHNANN--GLKIAIDLCEGVK 84
+LRL +HD G D SI R E++ NAN+ G + + V+
Sbjct: 36 ILRLHFHDCFV-------NGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVE 88
Query: 85 AKHPR-ITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSES---PEEGRLPDAAQGVSHL 140
+ PR ++ ADL +A +V + GGP+ GR+DS ++ LP + L
Sbjct: 89 SACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQL 148
Query: 141 RDIFYRMGLS-DKDIVALSGGHTLGR 165
+D F +GL+ D+VAL GGHT G+
Sbjct: 149 KDSFRNVGLNRSSDLVALYGGHTFGK 174
>pdb|3FM1|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 5/159 (3%)
Query: 36 LRLAWHDAGTYDAKTRTGGPDGSIRHEQEYAHN--ANNGLKIAIDLCEGVKAKHPRITYA 93
LRL +HDA + GG DGSI N AN G+ + + AKH I+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKH-NISAG 100
Query: 94 DLYQLAGVVAVE-VTGGPAIDFAPGRKDSSESPEEGRLPDAAQGVSHLRDIFYRMGLSDK 152
D Q AG V V GG I F GR D+ + + +P+ V + G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMGDAGFSPV 160
Query: 153 DIVALSGGHTLGRAHPERSGYEG-PWTKEPLKFDNSYFV 190
++V L H++ A G P+ P FD+ +F+
Sbjct: 161 EVVWLLASHSIAAADKVDPSIPGTPFDSTPQVFDSQFFI 199
>pdb|3FM6|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 5/159 (3%)
Query: 36 LRLAWHDAGTYDAKTRTGGPDGSIRHEQEYAHN--ANNGLKIAIDLCEGVKAKHPRITYA 93
LRL +HDA + GG DGSI N AN G+ + + AKH I+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKH-NISAG 100
Query: 94 DLYQLAGVVAVE-VTGGPAIDFAPGRKDSSESPEEGRLPDAAQGVSHLRDIFYRMGLSDK 152
D Q AG V V GG I F GR D+ + + +P+ V + G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPQDSVDSILARMGDAGFSPV 160
Query: 153 DIVALSGGHTLGRAHPERSGYEG-PWTKEPLKFDNSYFV 190
++V L H++ A G P+ P FD+ +F+
Sbjct: 161 EVVWLLASHSIAAADKVDPSIPGTPFDSTPGVFDSQFFI 199
>pdb|2W23|A Chain A, Structure Of Mutant W169y Of Pleurotus Eryngii Versatile
Peroxidase (Vp)
Length = 316
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 5/159 (3%)
Query: 36 LRLAWHDAGTYDAKTRTGGPDGSIRHEQEYAHN--ANNGLKIAIDLCEGVKAKHPRITYA 93
LRL +HDA + GG DGSI N AN G+ + + AKH I+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKH-NISAG 100
Query: 94 DLYQLAGVVAVE-VTGGPAIDFAPGRKDSSESPEEGRLPDAAQGVSHLRDIFYRMGLSDK 152
D Q AG V V GG I F GR D+ + + +P+ V + G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMGDAGFSPV 160
Query: 153 DIVALSGGHTLGRAHPERSGYEG-PWTKEPLKFDNSYFV 190
++V L H++ A G P+ P FD+ +F+
Sbjct: 161 EVVYLLASHSIAAADKVDPSIPGTPFDSTPGVFDSQFFI 199
>pdb|3FKG|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 5/159 (3%)
Query: 36 LRLAWHDAGTYDAKTRTGGPDGSIRHEQEYAHN--ANNGLKIAIDLCEGVKAKHPRITYA 93
LRL +HDA + GG DGSI N AN G+ + + AKH I+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKH-NISAG 100
Query: 94 DLYQLAGVVAVE-VTGGPAIDFAPGRKDSSESPEEGRLPDAAQGVSHLRDIFYRMGLSDK 152
D Q AG V V GG I F GR D+ + + +P+ V + G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMGDAGFSPV 160
Query: 153 DIVALSGGHTLGRAHPERSGYEG-PWTKEPLKFDNSYFV 190
++V L H++ A G P+ P FD+ +F+
Sbjct: 161 EVVWLLASHSIAAADKVDPSIPGTPFDSTPEVFDSQFFI 199
>pdb|2BOQ|A Chain A, Crystal Structure Of Versatile Peroxidase
Length = 331
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 5/159 (3%)
Query: 36 LRLAWHDAGTYDAKTRTGGPDGSIRHEQEYAHN--ANNGLKIAIDLCEGVKAKHPRITYA 93
LRL +HDA + GG DGSI N AN G+ + + AKH I+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKH-NISAG 100
Query: 94 DLYQLAGVVAVE-VTGGPAIDFAPGRKDSSESPEEGRLPDAAQGVSHLRDIFYRMGLSDK 152
D Q AG V V GG I F GR D+ + + +P+ V + G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMGDAGFSPV 160
Query: 153 DIVALSGGHTLGRAHPERSGYEG-PWTKEPLKFDNSYFV 190
++V L H++ A G P+ P FD+ +F+
Sbjct: 161 EVVWLLASHSIAAADKVDPSIPGTPFDSTPEVFDSQFFI 199
>pdb|2VKA|A Chain A, Site-directed Mutagenesis Of The Catalytic Tryptophan
Environment In Pleurotus Eryngii Versatile Peroxidase
Length = 317
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 5/159 (3%)
Query: 36 LRLAWHDAGTYDAKTRTGGPDGSIRHEQEYAHN--ANNGLKIAIDLCEGVKAKHPRITYA 93
LRL +HDA + GG DGSI N AN G+ + + AKH I+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKH-NISAG 100
Query: 94 DLYQLAGVVAVE-VTGGPAIDFAPGRKDSSESPEEGRLPDAAQGVSHLRDIFYRMGLSDK 152
D Q AG V V GG I F GR D+ + + +P+ V + G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMGDAGFSPV 160
Query: 153 DIVALSGGHTLGRAHPERSGYEG-PWTKEPLKFDNSYFV 190
++V L H++ A G P+ P FD+ +F+
Sbjct: 161 EVVWLLASHSIAAADKVDPSIPGTPFDSTPGVFDSQFFI 199
>pdb|3FJW|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
pdb|3FJW|B Chain B, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 5/159 (3%)
Query: 36 LRLAWHDAGTYDAKTRTGGPDGSIRHEQEYAHN--ANNGLKIAIDLCEGVKAKHPRITYA 93
LRL +HDA + GG DGSI N AN G+ + + AKH I+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKH-NISAG 100
Query: 94 DLYQLAGVVAVE-VTGGPAIDFAPGRKDSSESPEEGRLPDAAQGVSHLRDIFYRMGLSDK 152
D Q AG V V GG I F GR D+ + + +P+ V + G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMGDAGFSPV 160
Query: 153 DIVALSGGHTLGRAHPERSGYEG-PWTKEPLKFDNSYFV 190
++V L H++ A G P+ P FD+ +F+
Sbjct: 161 EVVWLLASHSIAAADKVDPSIPGTPFDSTPGVFDSQFFI 199
>pdb|4FCS|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 315
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 5/159 (3%)
Query: 36 LRLAWHDAGTYDAKTRTGGPDGSIRHEQEYAHN--ANNGLKIAIDLCEGVKAKHPRITYA 93
LRL +HDA + GG DGSI N AN G+ + + AKH I+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKH-NISAG 100
Query: 94 DLYQLAGVVAVE-VTGGPAIDFAPGRKDSSESPEEGRLPDAAQGVSHLRDIFYRMGLSDK 152
D Q AG V V GG I F GR D+ + + +P+ V + G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMGDAGFSPV 160
Query: 153 DIVALSGGHTLGRAHPERSGYEG-PWTKEPLKFDNSYFV 190
++V L H++ A G P+ P FD+ +F+
Sbjct: 161 EVVWLLASHSIAAADGVDPSIPGTPFDSTPEVFDSQFFI 199
>pdb|3FM4|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 5/159 (3%)
Query: 36 LRLAWHDAGTYDAKTRTGGPDGSIRHEQEYAHN--ANNGLKIAIDLCEGVKAKHPRITYA 93
LRL +HDA + GG DGSI N AN G+ + + AKH I+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKH-NISAG 100
Query: 94 DLYQLAGVVAVE-VTGGPAIDFAPGRKDSSESPEEGRLPDAAQGVSHLRDIFYRMGLSDK 152
D Q AG V V GG I F GR D+ + + +P+ V + G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMGDAGFSPV 160
Query: 153 DIVALSGGHTLGRAHPERSGYEG-PWTKEPLKFDNSYFV 190
++V L H++ A G P+ P FD+ +F+
Sbjct: 161 EVVWLLASHSIAAAAKVDPSIPGTPFDSTPGVFDSQFFI 199
>pdb|4FDQ|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 315
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 66/159 (41%), Gaps = 5/159 (3%)
Query: 36 LRLAWHDAGTYDAKTRTGGPDGSIRHEQEYAHN--ANNGLKIAIDLCEGVKAKHPRITYA 93
LRL +HDA + GG DGSI N AN G+ + + AKH I+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKH-NISAG 100
Query: 94 DLYQLAGVVAVE-VTGGPAIDFAPGRKDSSESPEEGRLPDAAQGVSHLRDIFYRMGLSDK 152
D Q AG V V GG I F GR D+ + + +P V + G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPGPFDSVDSILARMGDAGFSPV 160
Query: 153 DIVALSGGHTLGRAHPERSGYEG-PWTKEPLKFDNSYFV 190
++V L H++ A G P+ P FD+ +F+
Sbjct: 161 EVVWLLASHSIAAADKVDPSIPGTPFDSTPEVFDSQFFI 199
>pdb|4G05|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 317
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 66/159 (41%), Gaps = 5/159 (3%)
Query: 36 LRLAWHDAGTYDAKTRTGGPDGSIRHEQEYAHN--ANNGLKIAIDLCEGVKAKHPRITYA 93
LRL +HDA + GG DGSI N AN G+ + + AKH I+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKH-NISAG 100
Query: 94 DLYQLAGVVAVE-VTGGPAIDFAPGRKDSSESPEEGRLPDAAQGVSHLRDIFYRMGLSDK 152
D Q AG V V GG I F GR D+ + + +P V + G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPGPFDSVDSILARMGDAGFSPV 160
Query: 153 DIVALSGGHTLGRAHPERSGYEG-PWTKEPLKFDNSYFV 190
++V L H++ A G P+ P FD+ +F+
Sbjct: 161 EVVWLLASHSIAAADKVDPSIPGTPFDSTPEVFDSQFFI 199
>pdb|4FCN|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 319
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 66/159 (41%), Gaps = 5/159 (3%)
Query: 36 LRLAWHDAGTYDAKTRTGGPDGSIRHEQEYAHN--ANNGLKIAIDLCEGVKAKHPRITYA 93
LRL +HDA + GG DGSI N AN G+ + + AKH I+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKH-NISAG 100
Query: 94 DLYQLAGVVAVE-VTGGPAIDFAPGRKDSSESPEEGRLPDAAQGVSHLRDIFYRMGLSDK 152
D Q AG V V GG I F GR D+ + + +P V + G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPGPFDSVDSILARMGDAGFSPV 160
Query: 153 DIVALSGGHTLGRAHPERSGYEG-PWTKEPLKFDNSYFV 190
++V L H++ A G P+ P FD+ +F+
Sbjct: 161 EVVWLLASHSIAAADGVDPSIPGTPFDSTPEVFDSQFFI 199
>pdb|3Q3U|A Chain A, Trametes Cervina Lignin Peroxidase
Length = 338
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 67/178 (37%), Gaps = 17/178 (9%)
Query: 90 ITYADLYQLAGVV-AVEVTGGPAIDFAPGRKDSSESPEEGRLPDAAQGVSHLRDIFYRMG 148
+++ D Q AG V A GGP + F GR + S+ +G +PD + +G
Sbjct: 104 VSFGDFVQFAGAVGAANCAGGPRLQFLAGRSNISQPSPDGLVPDPTDSADKILARMADIG 163
Query: 149 LSDKDIVALSGGHTLGRAHPERSGYEG-PWTKEPLKFDNSYFVXXXXXXXXXXXX----- 202
S ++V L H++ + + G P+ P FD +FV
Sbjct: 164 FSPTEVVHLLASHSIAAQYEVDTDVAGSPFDSTPSVFDTQFFVESLLHGTQFTGSGQGGE 223
Query: 203 ----------XPTDKALLEDPKFRYYVELYAKDEDAFFTDYAASHKKLSELGFNPPSL 250
+D AL DP+ + ++ A ++ A +L+ +G P L
Sbjct: 224 VMSPIPGEFRLQSDFALSRDPRTACEWQALVNNQQAMVNNFEAVMSRLAVIGQIPSEL 281
>pdb|1LY8|A Chain A, The Crystal Structure Of A Mutant Enzyme Of Coprinus
Cinereus Peroxidase Provides An Understanding Of Its
Increased Thermostability And Insight Into Modelling Of
Protein Structures
pdb|1LY8|B Chain B, The Crystal Structure Of A Mutant Enzyme Of Coprinus
Cinereus Peroxidase Provides An Understanding Of Its
Increased Thermostability And Insight Into Modelling Of
Protein Structures
Length = 343
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 70/165 (42%), Gaps = 11/165 (6%)
Query: 36 LRLAWHDA-GTYDAKTRTGGPDGS------IRHEQ-EYAHNANNGLKIAIDLCEGVKAKH 87
LR+A+HDA G A T G G I H E A AN GL ++ V H
Sbjct: 50 LRIAFHDAIGFSPALTAAGQFGGGGADGSIIAHSNIELAFPANGGLTDTVEALRAVGINH 109
Query: 88 PRITYADLYQLAGVVAVE-VTGGPAIDFAPGRKDSSESPEEGRLPDAAQGVSHLRDIFYR 146
+++ DL Q A V + G P ++F GR +SS+ +P V+ + D F
Sbjct: 110 -GVSFGDLIQFAAAVGMSNCPGSPRLEFLTGRSNSSQPSPPSLIPGPGNTVTAILDRFGD 168
Query: 147 MGLSDKDIVALSGGHTLGRAHPERSG-YEGPWTKEPLKFDNSYFV 190
G S ++V L H+L S + P P FD +++
Sbjct: 169 AGFSPDEVVDLLAAHSLASQEGLNSAIFRSPLDSTPQVFDTQFYI 213
>pdb|3UT2|A Chain A, Crystal Structure Of Fungal Magkatg2
pdb|3UT2|B Chain B, Crystal Structure Of Fungal Magkatg2
Length = 764
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 85/246 (34%), Gaps = 92/246 (37%)
Query: 34 IMLRLAWHDAGTY---DAKTRTGGPDGSIRHEQEYAHNANNGLKIAIDLCEGVKAKH-PR 89
+ +R+A H AGTY D + G + N N L A L +K K+ +
Sbjct: 112 LFVRMAXHSAGTYRAMDGRGGGGMGQQRFAPLNSWPDNQN--LDKARRLIWPIKQKYGNK 169
Query: 90 ITYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSESPE----------------------- 126
I++ADL L G VA+E G + F GR D+ +S E
Sbjct: 170 ISWADLMLLTGNVALENMGFKTLGFGGGRADTWQSDEAVYWGAETTFVPQGNDVRYNNSV 229
Query: 127 -------------------------EG--RLPDAAQGVSHLRDIFYRMGLSDKDIVAL-S 158
EG PD A +R+ F RMG++D + VAL +
Sbjct: 230 DINARADKLEKPLAATHMGLIYVNPEGPNGTPDPAASAKDIREAFGRMGMNDTETVALIA 289
Query: 159 GGHTLGRAH-----------PE------------------------RSGYEGPWTKEPLK 183
GGH G+ H PE SG E WTK P K
Sbjct: 290 GGHAFGKTHGAVKGSNIGPAPEAADLGMQGLGWHNSVGDGNGPNQMTSGLEVIWTKTPTK 349
Query: 184 FDNSYF 189
+ N Y
Sbjct: 350 WSNGYL 355
>pdb|1SCH|A Chain A, Peanut Peroxidase
pdb|1SCH|B Chain B, Peanut Peroxidase
Length = 294
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 94/252 (37%), Gaps = 54/252 (21%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGS-IRHEQEYAHNANN--GLKIAID--------LCEGV 83
+LRL +HD D S E+ NAN+ G ++ ID LC GV
Sbjct: 36 LLRLHFHDCFVQGCDASVLLDDTSNFTGEKTAGPNANSIRGFEV-IDTIKSQVESLCPGV 94
Query: 84 KAKHPRITYADLYQLAGVVAVEVTGGPAIDFAPGRKDS---SESPEEGRLPDAAQGVSHL 140
++ AD+ +A +V GG + + GR+DS S S LP +S L
Sbjct: 95 ------VSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGL 148
Query: 141 RDIFYRMGLSDKDIVALSGGHTLGRAHP--------ERSGYEGPWTKE------------ 180
F G + K++V LSG HT+G+A S + + K
Sbjct: 149 ISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRTRIYNESNIDPTYAKSLQANCPSVGGDT 208
Query: 181 ---------PLKFDNSYFVXXXXXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFT 231
P KFDN+Y++ +D+ L V Y+ + F T
Sbjct: 209 NLSPFDVTTPNKFDNAYYINLRNKKGLLH----SDQQLFNGVSTDSQVTAYSNNAATFNT 264
Query: 232 DYAASHKKLSEL 243
D+ + K+ L
Sbjct: 265 DFGNAMIKMGNL 276
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N
pdb|1QGJ|B Chain B, Arabidopsis Thaliana Peroxidase N
Length = 300
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 93/255 (36%), Gaps = 47/255 (18%)
Query: 32 APIMLRLAWHDA--GTYDAKTRTGGPDGSIRHEQEYAHNANN--GLKIAIDLCEGVKAKH 87
A ++RL +HD DA G D E+ N N+ G ++ + V+
Sbjct: 33 AASLIRLHFHDCFVNGCDASLLLDGAD----SEKLAIPNINSARGFEVIDTIKAAVENAC 88
Query: 88 P-RITYADLYQLAGVVAVEVTGGPAIDFAPGRKDS--SESPEEGRLPDAAQGVSHLRDIF 144
P ++ AD+ LA +V ++GGP A GRKD + LP + + + F
Sbjct: 89 PGVVSCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSANNLPSPFEPLDAIIAKF 148
Query: 145 YRMGLSDKDIVALSGGHTLGRAHP--------------------ERSGYEGPWTKEPL-- 182
+ L+ D+VALSG HT G+A E S T PL
Sbjct: 149 VAVNLNITDVVALSGAHTFGQAKCAVFSNRLFNFTGAGNPDATLETSLLSNLQTVCPLGG 208
Query: 183 --------------KFDNSYFVXXXXXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDA 228
FDN+YF + L + VE Y++ +
Sbjct: 209 NSNITAPLDRSTTDTFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKKLVEAYSRSQSL 268
Query: 229 FFTDYAASHKKLSEL 243
FF D+ + ++ +
Sbjct: 269 FFRDFTCAMIRMGNI 283
>pdb|1CK6|A Chain A, Binding Mode Of Salicylhydroxamic Acid To Arthromyces
Ramosus Peroxidase
pdb|1C8I|A Chain A, Binding Mode Of Hydroxylamine To Arthromyces Ramosus
Peroxidase
pdb|1ARP|A Chain A, Crystal Structure Of The Fungal Peroxidase From
Arthromyces Ramosus At 1.9 Angstroms Resolution:
Structural Comparisons With The Lignin And Cytochrome C
Peroxidases
pdb|1ARU|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1ARV|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1ARW|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1ARX|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1ARY|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1GZA|A Chain A, Peroxidase
pdb|1GZB|A Chain A, Peroxidase
pdb|1HSR|A Chain A, Binding Mode Of Benzhydroxamic Acid To Arthromyces Ramosus
Peroxidase
pdb|2E3B|A Chain A, Crystal Structure Of The Ha-Bound Form Of Arthromyces
Ramosus Peroxidase At 1.3 Angstroms Resolution
pdb|2E3A|A Chain A, Crystal Structure Of The No-Bound Form Of Arthromyces
Ramosus Peroxidase At 1.3 Angstroms Resolution
pdb|2E39|A Chain A, Crystal Structure Of The Cn-Bound Form Of Arthromyces
Ramosus Peroxidase At 1.3 Angstroms Resolution
Length = 344
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 69/166 (41%), Gaps = 11/166 (6%)
Query: 35 MLRLAWHDA-GTYDAKTRTGGPDGS------IRHEQ-EYAHNANNGLKIAIDLCEGVKAK 86
+LR+ +HDA G A T G G I H E A AN GL I+ V
Sbjct: 50 ILRIVFHDAIGFSPALTAAGQFGGGGADGSIIAHSNIELAFPANGGLTDTIEALRAVGIN 109
Query: 87 HPRITYADLYQLAGVVAVE-VTGGPAIDFAPGRKDSSESPEEGRLPDAAQGVSHLRDIFY 145
H +++ DL Q A V + G P ++F GR +SS+ +P V+ + D
Sbjct: 110 H-GVSFGDLIQFATAVGMSNCPGSPRLEFLTGRSNSSQPSPPSLIPGPGNTVTAILDRMG 168
Query: 146 RMGLSDKDIVALSGGHTLGRAHPERSG-YEGPWTKEPLKFDNSYFV 190
G S ++V L H+L S + P P FD +++
Sbjct: 169 DAGFSPDEVVDLLAAHSLASQEGLNSAIFRSPLDSTPQVFDTQFYI 214
>pdb|1LYK|A Chain A, The Impact Of The Physical And Chemical Enviroment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
pdb|1LYK|B Chain B, The Impact Of The Physical And Chemical Enviroment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
Length = 343
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 11/166 (6%)
Query: 35 MLRLAWHDA-GTYDAKTRTGGPDGS------IRHEQ-EYAHNANNGLKIAIDLCEGVKAK 86
+LR+ +HDA G A T G G I H E A AN GL ++ V
Sbjct: 49 ILRIVFHDAIGFSPALTAAGQFGGGGADGSIIAHSNIELAFPANGGLTDTVEALRAVGIN 108
Query: 87 HPRITYADLYQLAGVVAVE-VTGGPAIDFAPGRKDSSESPEEGRLPDAAQGVSHLRDIFY 145
H +++ DL Q A V + G P ++F GR +SS+ +P V+ + D
Sbjct: 109 H-GVSFGDLIQFATAVGMSNCPGSPRLEFLTGRSNSSQPSPPSLIPGPGNTVTAILDRMG 167
Query: 146 RMGLSDKDIVALSGGHTLGRAHPERSG-YEGPWTKEPLKFDNSYFV 190
G S ++V L H+L S + P P FD +++
Sbjct: 168 DAGFSPDEVVDLLAAHSLASQEGLNSAIFRSPLDSTPQVFDTQFYI 213
>pdb|1LY9|A Chain A, The Impact Of The Physical And Chemical Environment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
pdb|1LY9|B Chain B, The Impact Of The Physical And Chemical Environment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
pdb|1LYC|A Chain A, The Impact Of The Physical And Chemical Enviroment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
pdb|1LYC|B Chain B, The Impact Of The Physical And Chemical Enviroment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
Length = 343
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 68/166 (40%), Gaps = 11/166 (6%)
Query: 35 MLRLAWHDA-GTYDAKTRTGGPDGS------IRHEQ-EYAHNANNGLKIAIDLCEGVKAK 86
+LR+ +HDA G A T G G I H E A AN GL ++ V
Sbjct: 49 ILRIVFHDAIGFSPALTAAGQFGGGGADGSIIAHSNIELAFPANGGLTDTVEALRAVGIN 108
Query: 87 HPRITYADLYQLAGVVAVE-VTGGPAIDFAPGRKDSSESPEEGRLPDAAQGVSHLRDIFY 145
H +++ DL Q A V + G P ++F GR SS+ +P V+ + D
Sbjct: 109 H-GVSFGDLIQFATAVGMSNCPGSPRLEFLTGRSSSSQPSPPSLIPGPGNTVTAILDRMG 167
Query: 146 RMGLSDKDIVALSGGHTLGRAHPERSG-YEGPWTKEPLKFDNSYFV 190
G S ++V L H+L S + P P FD +++
Sbjct: 168 DAGFSPDEVVDLLAAHSLASQEGLNSAIFRSPLDSTPQVFDTQFYI 213
>pdb|1U2J|A Chain A, Crystal Structure Of The C-Terminal Domain From The
Catalase-Peroxidase Katg Of Escherichia Coli (P21 21 21)
pdb|1U2J|B Chain B, Crystal Structure Of The C-Terminal Domain From The
Catalase-Peroxidase Katg Of Escherichia Coli (P21 21 21)
pdb|1U2J|C Chain C, Crystal Structure Of The C-Terminal Domain From The
Catalase-Peroxidase Katg Of Escherichia Coli (P21 21 21)
pdb|1U2J|D Chain D, Crystal Structure Of The C-Terminal Domain From The
Catalase-Peroxidase Katg Of Escherichia Coli (P21 21 21)
pdb|1U2J|E Chain E, Crystal Structure Of The C-Terminal Domain From The
Catalase-Peroxidase Katg Of Escherichia Coli (P21 21 21)
pdb|1U2J|F Chain F, Crystal Structure Of The C-Terminal Domain From The
Catalase-Peroxidase Katg Of Escherichia Coli (P21 21 21)
pdb|1U2J|G Chain G, Crystal Structure Of The C-Terminal Domain From The
Catalase-Peroxidase Katg Of Escherichia Coli (P21 21 21)
pdb|1U2J|H Chain H, Crystal Structure Of The C-Terminal Domain From The
Catalase-Peroxidase Katg Of Escherichia Coli (P21 21 21)
Length = 326
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 7/160 (4%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGS-IRHEQEYAHNANNGLKIAIDLCEGVKAKHPRITYA 93
++ +AW A T+ + GG +G+ + + + N A+ + E ++ + + + A
Sbjct: 67 LVSVAWASASTFRGGDKRGGANGARLALMPQRDWDVNAAAVRALPVLEKIQKESGKASLA 126
Query: 94 DLYQLAGVVAVEVTGGPA-----IDFAPGRKDSSESPEEGRLPDAAQGVSH-LRDIFYRM 147
D+ LAGVV VE A + FAPGR D+ + + + + + ++ R+ R+
Sbjct: 127 DIIVLAGVVGVEKAASAAGLSIHVPFAPGRVDARQDQTDIEMFELLEPIADGFRNYRARL 186
Query: 148 GLSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNS 187
+S + + + L PE + G FD S
Sbjct: 187 DVSTTESLLIDKAQQLTLTAPEMTALVGGMRVLGANFDGS 226
>pdb|1U2K|A Chain A, Crystal Structure Of The C-Terminal Domain From The
Catalase- Peroxidase Katg Of Escherichia Coli (I41)
pdb|1U2L|A Chain A, Crystal Structure Of The C-Terminal Domain From The
Catalase-Peroxidase Katg Of Escherichia Coli (P1)
pdb|1U2L|B Chain B, Crystal Structure Of The C-Terminal Domain From The
Catalase-Peroxidase Katg Of Escherichia Coli (P1)
Length = 309
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 7/160 (4%)
Query: 35 MLRLAWHDAGTYDAKTRTGGPDGS-IRHEQEYAHNANNGLKIAIDLCEGVKAKHPRITYA 93
++ +AW A T+ + GG +G+ + + + N A+ + E ++ + + + A
Sbjct: 50 LVSVAWASASTFRGGDKRGGANGARLALMPQRDWDVNAAAVRALPVLEKIQKESGKASLA 109
Query: 94 DLYQLAGVVAVEVTGGPA-----IDFAPGRKDSSESPEEGRLPDAAQGVSH-LRDIFYRM 147
D+ LAGVV VE A + FAPGR D+ + + + + + ++ R+ R+
Sbjct: 110 DIIVLAGVVGVEKAASAAGLSIHVPFAPGRVDARQDQTDIEMFELLEPIADGFRNYRARL 169
Query: 148 GLSDKDIVALSGGHTLGRAHPERSGYEGPWTKEPLKFDNS 187
+S + + + L PE + G FD S
Sbjct: 170 DVSTTESLLIDKAQQLTLTAPEMTALVGGMRVLGANFDGS 209
>pdb|2CCA|A Chain A, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
pdb|2CCA|B Chain B, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
Length = 740
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 82/234 (35%), Gaps = 77/234 (32%)
Query: 33 PIMLRLAWHDAGTYDAKTRTGGPDGSI-RHEQEYAHNANNGLKIAIDLCEGVKAKH-PRI 90
P+ +R+AWH AGTY GG G + R + N L A L VK K+ ++
Sbjct: 100 PLFIRMAWHAAGTYRIHDGRGGAGGGMQRFAPLNSWPDNASLDKARRLLWPVKKKYGKKL 159
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSESPE---------------------EGR 129
++ADL AG A+E G F GR D E E E
Sbjct: 160 SWADLIVFAGNCALESMGFKTFGFGFGRVDQWEPDEVYWGKEATWLGDERYSGKRDLENP 219
Query: 130 L------------------PDAAQGVSHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH--- 167
L PD +R+ F RM ++D + AL GGHT G+ H
Sbjct: 220 LAAVQMGLIYVNPEGPNGNPDPMAAAVDIRETFRRMAMNDVETAALIVGGHTFGKTHGAG 279
Query: 168 ------PE--------------------------RSGYEGPWTKEPLKFDNSYF 189
PE SG E WT P K+DNS+
Sbjct: 280 PADLVGPEPEAAPLEQMGLGWKSSYGTGTGKDAITSGIEVVWTNTPTKWDNSFL 333
>pdb|1SJ2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
Catalase-Peroxidase
pdb|1SJ2|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
Catalase-Peroxidase
Length = 743
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 82/234 (35%), Gaps = 77/234 (32%)
Query: 33 PIMLRLAWHDAGTYDAKTRTGGPDGSI-RHEQEYAHNANNGLKIAIDLCEGVKAKH-PRI 90
P+ +R+AWH AGTY GG G + R + N L A L VK K+ ++
Sbjct: 103 PLFIRMAWHAAGTYRIHDGRGGAGGGMQRFAPLNSWPDNASLDKARRLLWPVKKKYGKKL 162
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSESPE---------------------EGR 129
++ADL AG A+E G F GR D E E E
Sbjct: 163 SWADLIVFAGNCALESMGFKTFGFGFGRVDQWEPDEVYWGKEATWLGDERYSGKRDLENP 222
Query: 130 L------------------PDAAQGVSHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH--- 167
L PD +R+ F RM ++D + AL GGHT G+ H
Sbjct: 223 LAAVQMGLIYVNPEGPNGNPDPMAAAVDIRETFRRMAMNDVETAALIVGGHTFGKTHGAG 282
Query: 168 ------PE--------------------------RSGYEGPWTKEPLKFDNSYF 189
PE SG E WT P K+DNS+
Sbjct: 283 PADLVGPEPEAAPLEQMGLGWKSSYGTGTGKDAITSGIEVVWTNTPTKWDNSFL 336
>pdb|1H3J|A Chain A, Structure Of Recombinant Coprinus Cinereus Peroxidase
Determined To 2.0 A
pdb|1H3J|B Chain B, Structure Of Recombinant Coprinus Cinereus Peroxidase
Determined To 2.0 A
Length = 342
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 11/166 (6%)
Query: 35 MLRLAWHDA-GTYDAKTRTGGPDGS------IRHEQ-EYAHNANNGLKIAIDLCEGVKAK 86
+LR+ +HDA G A T G G I H E A AN GL ++ V
Sbjct: 48 ILRIVFHDAIGFSPALTAAGQFGGGGADGSIIAHSNIELAFPANGGLTDTVEALRAVGIN 107
Query: 87 HPRITYADLYQLAGVVAVE-VTGGPAIDFAPGRKDSSESPEEGRLPDAAQGVSHLRDIFY 145
H +++ DL Q A V + G P ++F GR +SS+ +P V+ + D
Sbjct: 108 H-GVSFGDLIQFATAVGMSNCPGSPRLEFLTGRSNSSQPSPPSLIPGPGNTVTAILDRMG 166
Query: 146 RMGLSDKDIVALSGGHTLGRAHPERSG-YEGPWTKEPLKFDNSYFV 190
G S ++V L +L S + P P FD +++
Sbjct: 167 DAGFSPDEVVDLLAAXSLASQEGLNSAIFRSPLDSTPQVFDTQFYI 212
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1
Length = 309
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 73/188 (38%), Gaps = 38/188 (20%)
Query: 90 ITYADLYQLAGVVAVEVTGGPAIDFAPGRKDS----SESPEEGRLPDAAQGVSHLRDIFY 145
++ +D+ LA +V V+GGP GR+DS S LP + V L +
Sbjct: 104 VSCSDILALAARDSVVVSGGPDYRVPLGRRDSRSFASTQDVLSDLPGPSSNVQSLLALLG 163
Query: 146 RMGLSDKDIVALSGGHTLGRAH---------PERSGYEGPW------------------- 177
R+GL D+V +SGGHT+G AH P P
Sbjct: 164 RLGLDATDLVTISGGHTIGLAHCSSFEDRLFPRPDPTISPTFLSRLKRTCPAKGTDRRTV 223
Query: 178 --TKEPLKFDNSYFVXXXXXXXXXXXXXPTDKALLEDPKFRYYVELYAKDEDAFFTDYAA 235
+ P FDN Y++ +D+ L + R VE +A+ + FF +
Sbjct: 224 LDVRTPNVFDNKYYIDLVNREGLFV----SDQDLFTNAITRPIVERFAQSQQDFFEQFGV 279
Query: 236 SHKKLSEL 243
S K+ ++
Sbjct: 280 SIGKMGQM 287
>pdb|2CCD|A Chain A, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
pdb|2CCD|B Chain B, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
Length = 740
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 82/234 (35%), Gaps = 77/234 (32%)
Query: 33 PIMLRLAWHDAGTYDAKTRTGGPDGSI-RHEQEYAHNANNGLKIAIDLCEGVKAKH-PRI 90
P+ +R+AWH AGTY GG G + R + N L A L VK K+ ++
Sbjct: 100 PLFIRMAWHAAGTYRIHDGRGGAGGGMQRFAPLNSWPDNASLDKARRLLWPVKKKYGKKL 159
Query: 91 TYADLYQLAGVVAVEVTGGPAIDFAPGRKDSSESPE---------------------EGR 129
++ADL AG A+E G F GR D E E E
Sbjct: 160 SWADLIVFAGNCALESMGFKTFGFGFGRVDQWEPDEVYWGKEATWLGDERYSGKRDLENP 219
Query: 130 L------------------PDAAQGVSHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH--- 167
L PD +R+ F RM ++D + AL GGHT G+ H
Sbjct: 220 LAAVQMGLIYVNPEGPNGNPDPMAAAVDIRETFRRMAMNDVETAALIVGGHTFGKTHGAG 279
Query: 168 ------PE--------------------------RSGYEGPWTKEPLKFDNSYF 189
PE +G E WT P K+DNS+
Sbjct: 280 PADLVGPEPEAAPLEQMGLGWKSSYGTGTGKDAITTGIEVVWTNTPTKWDNSFL 333
>pdb|1LGA|A Chain A, Crystallographic Refinement Of Lignin Peroxidase At 2
Angstroms
pdb|1LGA|B Chain B, Crystallographic Refinement Of Lignin Peroxidase At 2
Angstroms
pdb|1LLP|A Chain A, Lignin Peroxidase (isozyme H2) Pi 4.15
Length = 343
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 4/130 (3%)
Query: 64 EYAHNANNGLKIAIDLCEGVKAKHPRITYADLYQLAGVVAVE-VTGGPAIDFAPGRKDSS 122
E A + N GL + + + KH +T D AG VA+ G P ++F GRK ++
Sbjct: 78 ETAFHPNIGLDEVVAMQKPFVQKH-GVTPGDFIAFAGAVALSNCPGAPQMNFFTGRKPAT 136
Query: 123 ESPEEGRLPDAAQGVSHLRDIFYRMGLSDK-DIVALSGGHTLGRAHPERSGYEG-PWTKE 180
+ +G +P+ V + G D+ ++V + H++ + +G P+
Sbjct: 137 QPAPDGLVPEPFHTVDQIIARVNDAGEFDELELVWMLSAHSVAAVNDVDPTVQGLPFDST 196
Query: 181 PLKFDNSYFV 190
P FD+ +FV
Sbjct: 197 PGIFDSQFFV 206
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From
Royal Palm Tree
Length = 304
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 21/150 (14%)
Query: 32 APIMLRLAWHDAGTYDAKTRTGGPDGSIRHEQEYAHNA------NN----GLKIAIDLCE 81
AP ++R+ +HD G D S+ + + A NN G ++
Sbjct: 33 APGLIRMHFHDCFVR-------GCDASVLLDSTANNTAEKDAIPNNPSLRGFEVITAAKS 85
Query: 82 GVKAKHPR-ITYADLYQLAGVVAVEVTGGPAIDFAPGRKD---SSESPEEGRLPDAAQGV 137
V+A P+ ++ AD+ A + + G GR+D S S ++P
Sbjct: 86 AVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNA 145
Query: 138 SHLRDIFYRMGLSDKDIVALSGGHTLGRAH 167
+ L + F L+ ++V LSG H++G AH
Sbjct: 146 TQLINSFANKTLTADEMVTLSGAHSIGVAH 175
>pdb|2IYO|A Chain A, Structural Characterization Of A Bacterial 6pdh Reveals
Aspects Of Specificity, Mechanism And Mode Of Inhibition
Length = 472
Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 92 YADLYQLAGVVAVEVTGGPAIDFAPGRKDSSESPEEG----RLPDAAQGVSHLR 141
Y Y+ V A +V GPA+DF+ +K+ E + ++ AQG + LR
Sbjct: 290 YISTYKDERVKASKVLSGPALDFSGDKKEVIEKIRKALYFSKIMSYAQGFAQLR 343
>pdb|2IYP|A Chain A, Product Rup
pdb|2IYP|B Chain B, Product Rup
pdb|2IYP|C Chain C, Product Rup
Length = 473
Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 92 YADLYQLAGVVAVEVTGGPAIDFAPGRKDSSESPEEG----RLPDAAQGVSHLR 141
Y Y+ V A +V GPA+DF+ +K+ E + ++ AQG + LR
Sbjct: 291 YISTYKDERVKASKVLSGPALDFSGDKKEVIEKIRKALYFSKIMSYAQGFAQLR 344
>pdb|2IZ0|A Chain A, Pex Inhibitor-Home Data
pdb|2IZ0|B Chain B, Pex Inhibitor-Home Data
pdb|2IZ0|C Chain C, Pex Inhibitor-Home Data
pdb|2IZ1|A Chain A, 6pdh Complexed With Pex Inhibitor Synchrotron Data
pdb|2IZ1|B Chain B, 6pdh Complexed With Pex Inhibitor Synchrotron Data
pdb|2IZ1|C Chain C, 6pdh Complexed With Pex Inhibitor Synchrotron Data
Length = 474
Score = 27.7 bits (60), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 92 YADLYQLAGVVAVEVTGGPAIDFAPGRKDSSESPEEG----RLPDAAQGVSHLR 141
Y Y+ V A +V GPA+DF+ +K+ E + ++ AQG + LR
Sbjct: 292 YISTYKDERVKASKVLSGPALDFSGDKKEVIEKIRKALYFSKIMSYAQGFAQLR 345
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,089,238
Number of Sequences: 62578
Number of extensions: 328314
Number of successful extensions: 1184
Number of sequences better than 100.0: 146
Number of HSP's better than 100.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 751
Number of HSP's gapped (non-prelim): 206
length of query: 267
length of database: 14,973,337
effective HSP length: 97
effective length of query: 170
effective length of database: 8,903,271
effective search space: 1513556070
effective search space used: 1513556070
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.9 bits)