Your job contains 1 sequence.
>024490
MGTMDVEWLLDFLKGMIKPLAATAVVLLAVLLSFLQKLGIEGEMIYSIVRAFLQLSVIGF
VLQFIFSQDNRGWIILAYLFMVIVAGYTAGQRAKHVPRGKYVAGASILAGTAVTMLMLVV
LNVFPFTPRYIIPVAGMMVGNAMTVTGVTMKRLRDDIKIQLNLVETALALGATPRQATKQ
QVKRSLVIALSPVLDNAKTVGLISLPGAMTGMIMGGASPLEAIQLQIVVMNMLIGASTVS
SIMSTYLCWPAFFTKAYQLESKVFRTD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024490
(267 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2049751 - symbol:ALS3 "ALUMINUM SENSITIVE 3" s... 1070 3.0e-108 1
UNIPROTKB|Q5W7C1 - symbol:STAR2 "UPF0014 membrane protein... 996 2.1e-100 1
UNIPROTKB|P77307 - symbol:ybbM "putative metal resistance... 423 1.1e-39 1
UNIPROTKB|Q3AFU4 - symbol:CHY_0118 "ABC transporter, perm... 418 3.7e-39 1
TIGR_CMR|CHY_0118 - symbol:CHY_0118 "ABC transporter, per... 418 3.7e-39 1
UNIPROTKB|Q81XQ7 - symbol:BAS4811 "Membrane protein, puta... 311 8.2e-28 1
TIGR_CMR|BA_5176 - symbol:BA_5176 "membrane protein, puta... 311 8.2e-28 1
UNIPROTKB|Q60CD9 - symbol:MCA0169 "Conserved hypothetical... 309 1.3e-27 1
UNIPROTKB|Q47WS4 - symbol:CPS_4093 "Putative membrane pro... 195 1.6e-15 1
TIGR_CMR|CPS_4093 - symbol:CPS_4093 "putative membrane pr... 195 1.6e-15 1
UNIPROTKB|O53247 - symbol:MT3080 "Possible conserved tran... 193 2.6e-15 1
>TAIR|locus:2049751 [details] [associations]
symbol:ALS3 "ALUMINUM SENSITIVE 3" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0010044 "response to aluminum ion"
evidence=IMP] GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0010044 EMBL:AC005896 EMBL:AY687991
EMBL:AY072359 EMBL:AY114725 IPI:IPI00548254 PIR:D84791
RefSeq:NP_181270.1 UniGene:At.48558 UniGene:At.71153 STRING:Q9ZUT3
PRIDE:Q9ZUT3 EnsemblPlants:AT2G37330.1 GeneID:818310
KEGG:ath:AT2G37330 TAIR:At2g37330 eggNOG:COG0390
HOGENOM:HOG000260833 InParanoid:Q9ZUT3 KO:K02069 OMA:MQPTIDS
PhylomeDB:Q9ZUT3 ProtClustDB:CLSN2683976 Genevestigator:Q9ZUT3
InterPro:IPR005226 Pfam:PF03649 TIGRFAMs:TIGR00245 Uniprot:Q9ZUT3
Length = 273
Score = 1070 (381.7 bits), Expect = 3.0e-108, P = 3.0e-108
Identities = 207/263 (78%), Positives = 235/263 (89%)
Query: 5 DVEWLLDFLKGMIKPXXXXXXXXXXXXXSFLQKLGIEGEMIYSIVRAFLQLSVIGFVLQF 64
D EWL+ FLKGM+KP S+ Q L +EGEMIYS+ R+FLQLSVIGFVLQF
Sbjct: 11 DYEWLIVFLKGMVKPAAALVVVLLAVILSYSQNLSLEGEMIYSVSRSFLQLSVIGFVLQF 70
Query: 65 IFSQDNRGWIILAYLFMVIVAGYTAGQRAKHVPRGKYVAGASILAGTAVTMLMLVVLNVF 124
IF+Q+N GWIILAYLFMV VAGYTAGQRA+HVPRGKYVAG SILAGT++TM +LV+LNVF
Sbjct: 71 IFNQENSGWIILAYLFMVSVAGYTAGQRARHVPRGKYVAGLSILAGTSITMFLLVLLNVF 130
Query: 125 PFTPRYIIPVAGMMVGNAMTVTGVTMKRLRDDIKIQLNLVETALALGATPRQATKQQVKR 184
PFTPRY+IP+AGM+VGNAMTVTGVTMK+LRDDIK+QLNLVETALALGATPRQAT QQVKR
Sbjct: 131 PFTPRYMIPIAGMLVGNAMTVTGVTMKQLRDDIKMQLNLVETALALGATPRQATLQQVKR 190
Query: 185 SLVIALSPVLDNAKTVGLISLPGAMTGMIMGGASPLEAIQLQIVVMNMLIGASTVSSIMS 244
+LVI+LSPVLD+ KTVGLISLPGAMTGMIMGGASPLEAIQLQIVVMNM++GA+TVSSI S
Sbjct: 191 ALVISLSPVLDSCKTVGLISLPGAMTGMIMGGASPLEAIQLQIVVMNMMVGAATVSSITS 250
Query: 245 TYLCWPAFFTKAYQLESKVFRTD 267
TYLCWP+FFTKAYQL++ VF +D
Sbjct: 251 TYLCWPSFFTKAYQLQTHVFSSD 273
>UNIPROTKB|Q5W7C1 [details] [associations]
symbol:STAR2 "UPF0014 membrane protein STAR2" species:39947
"Oryza sativa Japonica Group" [GO:0005460 "UDP-glucose
transmembrane transporter activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0010044 "response to aluminum
ion" evidence=IMP] [GO:0012506 "vesicle membrane" evidence=IDA]
[GO:0015786 "UDP-glucose transport" evidence=IDA] GO:GO:0016021
GO:GO:0005886 GO:GO:0010044 EMBL:AP008211 GO:GO:0012506
eggNOG:COG0390 HOGENOM:HOG000260833 KO:K02069
ProtClustDB:CLSN2683976 InterPro:IPR005226 Pfam:PF03649
TIGRFAMs:TIGR00245 TCDB:3.A.1.139.1 GO:GO:0005460 EMBL:AB379845
EMBL:AC078977 EMBL:AP001111 EMBL:AK069359 RefSeq:NP_001054479.1
UniGene:Os.18539 STRING:Q5W7C1 PRIDE:Q5W7C1 GeneID:4337635
KEGG:dosa:Os05t0119000-01 KEGG:osa:4337635 Gramene:Q5W7C1
Uniprot:Q5W7C1
Length = 285
Score = 996 (355.7 bits), Expect = 2.1e-100, P = 2.1e-100
Identities = 194/257 (75%), Positives = 222/257 (86%)
Query: 11 DFLKGMIKPXXXXXXXXXXXXXSFLQKLGIEGEMIYSIVRAFLQLSVIGFVLQFIFSQDN 70
+FL GM+KP SF Q+LG+EGEM+Y++ RAFLQLSVIGFVLQFIF+Q +
Sbjct: 29 EFLVGMLKPVAATAVVAMAVALSFTQRLGLEGEMLYAMARAFLQLSVIGFVLQFIFTQKS 88
Query: 71 RGWIILAYLFMVIVAGYTAGQRAKHVPRGKYVAGASILAGTAVTMLMLVVLNVFPFTPRY 130
WI+LAYLFMV VAGYTAGQRA+HVPRGK++A SILAGT+VTM +LV L VFPFTPRY
Sbjct: 89 AAWILLAYLFMVTVAGYTAGQRARHVPRGKHIAAVSILAGTSVTMALLVALRVFPFTPRY 148
Query: 131 IIPVAGMMVGNAMTVTGVTMKRLRDDIKIQLNLVETALALGATPRQATKQQVKRSLVIAL 190
IIPVAGMMVGNAMTVTGVTMK+LR+D+ +Q +VETALALGATPRQAT +QV+RSLVIAL
Sbjct: 149 IIPVAGMMVGNAMTVTGVTMKKLREDVGMQRGVVETALALGATPRQATARQVRRSLVIAL 208
Query: 191 SPVLDNAKTVGLISLPGAMTGMIMGGASPLEAIQLQIVVMNMLIGASTVSSIMSTYLCWP 250
SPV+DNAKTVGLI+LPGAMTG+IMGGASPLEAIQLQIVVMNML+GASTVSSI+STYLCWP
Sbjct: 209 SPVIDNAKTVGLIALPGAMTGLIMGGASPLEAIQLQIVVMNMLMGASTVSSILSTYLCWP 268
Query: 251 AFFTKAYQLESKVFRTD 267
AFFT A+QL VF D
Sbjct: 269 AFFTGAFQLNDAVFAAD 285
>UNIPROTKB|P77307 [details] [associations]
symbol:ybbM "putative metal resistance protein"
species:83333 "Escherichia coli K-12" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] GO:GO:0016021 GO:GO:0005886
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U82664 eggNOG:COG0390 KO:K02069
OMA:MQPTIDS InterPro:IPR005226 Pfam:PF03649 TIGRFAMs:TIGR00245
RefSeq:NP_415024.4 RefSeq:YP_488782.1 ProteinModelPortal:P77307
TCDB:3.A.1.139.2 EnsemblBacteria:EBESCT00000005015
EnsemblBacteria:EBESCT00000017421 GeneID:12930858 GeneID:945137
KEGG:ecj:Y75_p0478 KEGG:eco:b0491 PATRIC:32116141 EchoBASE:EB3048
EcoGene:EG13260 HOGENOM:HOG000260834 ProtClustDB:CLSK879683
BioCyc:EcoCyc:G6267-MONOMER BioCyc:ECOL316407:JW5066-MONOMER
Genevestigator:P77307 Uniprot:P77307
Length = 259
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 82/227 (36%), Positives = 144/227 (63%)
Query: 33 SFLQKLGIEGEMIYSIVRAFLQLSVIGFVLQFIFSQDNRGWIILAYLFMVIVAGYTAGQR 92
S +KL +E ++++S+ RA +QL ++G+VL++IFS D+ +L LF+ A + A +R
Sbjct: 25 SHKEKLALEKDILWSVGRAIIQLIIVGYVLKYIFSVDDASLTLLMVLFICFNAAWNAQKR 84
Query: 93 AKHVPRGKYVAGASILAGTAVTMLMLVVLNVFPFTPRYIIPVAGMMVGNAMTVTGVTMKR 152
+K++ + + +I G +T+ +L++ F P +IP+AGM+ GNAM G+
Sbjct: 85 SKYIAKAFISSFIAITVGAGITLAVLILSGSIEFIPMQVIPIAGMIAGNAMVAVGLCYNN 144
Query: 153 LRDDIKIQLNLVETALALGATPRQATKQQVKRSLVIALSPVLDNAKTVGLISLPGAMTGM 212
L + + ++ L+LGATP+QA+ ++ S+ AL P +D+AKTVGL+SLPG M+G+
Sbjct: 145 LGQRVISEQQQIQEKLSLGATPKQASAILIRDSIRAALIPTVDSAKTVGLVSLPGMMSGL 204
Query: 213 IMGGASPLEAIQLQIVVMNMLIGASTVSSIMSTYLCWPAFFTKAYQL 259
I G P++AI+ QI+V ML+ +++S+I++ YL + F+ +QL
Sbjct: 205 IFAGIDPVKAIKYQIMVTFMLLSTASLSTIIACYLTYRKFYNSRHQL 251
>UNIPROTKB|Q3AFU4 [details] [associations]
symbol:CHY_0118 "ABC transporter, permease protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006810 "transport" evidence=ISS] [GO:0042626 "ATPase activity,
coupled to transmembrane movement of substances" evidence=ISS]
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0042626
eggNOG:COG0390 KO:K02069 OMA:MQPTIDS InterPro:IPR005226
Pfam:PF03649 TIGRFAMs:TIGR00245 HOGENOM:HOG000260834
RefSeq:YP_358990.1 STRING:Q3AFU4 GeneID:3727509 KEGG:chy:CHY_0118
PATRIC:21273429 BioCyc:CHYD246194:GJCN-118-MONOMER Uniprot:Q3AFU4
Length = 248
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 83/227 (36%), Positives = 140/227 (61%)
Query: 36 QKLGIEGEMIYSIVRAFLQLSVIGFVLQFIFSQDNRGWIILAYLF-MVIVAGYTAGQRAK 94
+KL +E +++ +RA +QL +G++L+FIF+++N W A L MV+ A Y AG+R +
Sbjct: 23 EKLLLEKDLLVGSIRAVVQLVAVGYILKFIFARNNF-WFTTALLLVMVLNAAYIAGKRGE 81
Query: 95 HVPRGKYVAGASILAGTAVTMLMLVVLNVFPFTPRYIIPVAGMMVGNAMTVTGVTMKRLR 154
+ ++ +I+ G +T+ L+ + P IPV+GM+VGNAM G+ + L+
Sbjct: 82 GIKNSHLISFGAIVMGLIITLGALIAFRAISYKPSQAIPVSGMIVGNAMVAVGLVFRSLK 141
Query: 155 DDIKIQLNLVETALALGATPRQATKQQVKRSLVIALSPVLDNAKTVGLISLPGAMTGMIM 214
+ + VE L+LGA PR+A ++ S+ A+ P +D KT+G++ LPG MTG+I+
Sbjct: 142 QTFRDRREEVEVKLSLGAPPREAAFSLIRESIKTAMLPTVDQMKTLGIVQLPGMMTGLIL 201
Query: 215 GGASPLEAIQLQIVVMNMLIGASTVSSIMSTYLCWPAFFTKAYQLES 261
GA+PL AI+ QI+V ML GA TV++ +++Y + FF + +Q+ S
Sbjct: 202 AGANPLMAIKYQIMVAFMLAGAVTVAAYVASYFAYRGFFNEDFQIVS 248
>TIGR_CMR|CHY_0118 [details] [associations]
symbol:CHY_0118 "ABC transporter, permease protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006810 "transport" evidence=ISS] [GO:0042626 "ATPase activity,
coupled to transmembrane movement of substances" evidence=ISS]
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0042626
eggNOG:COG0390 KO:K02069 OMA:MQPTIDS InterPro:IPR005226
Pfam:PF03649 TIGRFAMs:TIGR00245 HOGENOM:HOG000260834
RefSeq:YP_358990.1 STRING:Q3AFU4 GeneID:3727509 KEGG:chy:CHY_0118
PATRIC:21273429 BioCyc:CHYD246194:GJCN-118-MONOMER Uniprot:Q3AFU4
Length = 248
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 83/227 (36%), Positives = 140/227 (61%)
Query: 36 QKLGIEGEMIYSIVRAFLQLSVIGFVLQFIFSQDNRGWIILAYLF-MVIVAGYTAGQRAK 94
+KL +E +++ +RA +QL +G++L+FIF+++N W A L MV+ A Y AG+R +
Sbjct: 23 EKLLLEKDLLVGSIRAVVQLVAVGYILKFIFARNNF-WFTTALLLVMVLNAAYIAGKRGE 81
Query: 95 HVPRGKYVAGASILAGTAVTMLMLVVLNVFPFTPRYIIPVAGMMVGNAMTVTGVTMKRLR 154
+ ++ +I+ G +T+ L+ + P IPV+GM+VGNAM G+ + L+
Sbjct: 82 GIKNSHLISFGAIVMGLIITLGALIAFRAISYKPSQAIPVSGMIVGNAMVAVGLVFRSLK 141
Query: 155 DDIKIQLNLVETALALGATPRQATKQQVKRSLVIALSPVLDNAKTVGLISLPGAMTGMIM 214
+ + VE L+LGA PR+A ++ S+ A+ P +D KT+G++ LPG MTG+I+
Sbjct: 142 QTFRDRREEVEVKLSLGAPPREAAFSLIRESIKTAMLPTVDQMKTLGIVQLPGMMTGLIL 201
Query: 215 GGASPLEAIQLQIVVMNMLIGASTVSSIMSTYLCWPAFFTKAYQLES 261
GA+PL AI+ QI+V ML GA TV++ +++Y + FF + +Q+ S
Sbjct: 202 AGANPLMAIKYQIMVAFMLAGAVTVAAYVASYFAYRGFFNEDFQIVS 248
>UNIPROTKB|Q81XQ7 [details] [associations]
symbol:BAS4811 "Membrane protein, putative" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000260833 KO:K02069 OMA:MQPTIDS InterPro:IPR005226
Pfam:PF03649 TIGRFAMs:TIGR00245 RefSeq:NP_847359.1
RefSeq:YP_021831.2 RefSeq:YP_031054.1 DNASU:1084319
EnsemblBacteria:EBBACT00000010180 EnsemblBacteria:EBBACT00000016401
EnsemblBacteria:EBBACT00000020955 GeneID:1084319 GeneID:2816924
GeneID:2850126 KEGG:ban:BA_5176 KEGG:bar:GBAA_5176 KEGG:bat:BAS4811
ProtClustDB:CLSK875019 BioCyc:BANT260799:GJAJ-4889-MONOMER
BioCyc:BANT261594:GJ7F-5051-MONOMER Uniprot:Q81XQ7
Length = 265
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 78/235 (33%), Positives = 131/235 (55%)
Query: 35 LQKL-GI--EGEMIYSIVRAFLQLSVIGFVLQFIFSQDNRGWIILAYLFMVIVAGYTAGQ 91
L KL GI E ++ + R +QL ++ +VL ++F N + I + A + +
Sbjct: 25 LVKLKGIPREKQIALATFRMTIQLVLVAYVLTYVFENSNPFYTIALITSITTFAIFNIYK 84
Query: 92 RAKHVPRGK---YVAGASILAGTAVTMLML--VVLNVFP-FTPRYIIPVAGMMVGNAMTV 145
R ++P K VA S++AG+ +L+ V++ P + P+YI+P+ GM+VGNAMT
Sbjct: 85 RV-NIPMSKELKQVAALSMVAGSIGPLLLFIFVIIGHDPWYAPQYIVPITGMLVGNAMTG 143
Query: 146 TGVTMKRLRDDIKIQLNLVETALALGATPRQATKQQVKRSLVIALSPVLDNAKTVGLISL 205
+ +++K Q +E AL LGATP++AT ++ + A+ P +++ +G+ISL
Sbjct: 144 VSLGANTFLNNMKSQRGQIEGALMLGATPKEATAPLIRDAFDSAILPTINSMVGMGIISL 203
Query: 206 PGAMTGMIMGGASPLEAIQLQIVVMNMLIGASTVSSIMSTYLCWPAFFTKAYQLE 260
PG MTG I+ G SP AIQ QI ++ + G++ + I+ L + FF K QL+
Sbjct: 204 PGMMTGQILSGVSPFTAIQYQIAIILGISGSTAFAVIIFLQLGYKTFFNKRCQLK 258
>TIGR_CMR|BA_5176 [details] [associations]
symbol:BA_5176 "membrane protein, putative" species:198094
"Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000260833 KO:K02069 OMA:MQPTIDS InterPro:IPR005226
Pfam:PF03649 TIGRFAMs:TIGR00245 RefSeq:NP_847359.1
RefSeq:YP_021831.2 RefSeq:YP_031054.1 DNASU:1084319
EnsemblBacteria:EBBACT00000010180 EnsemblBacteria:EBBACT00000016401
EnsemblBacteria:EBBACT00000020955 GeneID:1084319 GeneID:2816924
GeneID:2850126 KEGG:ban:BA_5176 KEGG:bar:GBAA_5176 KEGG:bat:BAS4811
ProtClustDB:CLSK875019 BioCyc:BANT260799:GJAJ-4889-MONOMER
BioCyc:BANT261594:GJ7F-5051-MONOMER Uniprot:Q81XQ7
Length = 265
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 78/235 (33%), Positives = 131/235 (55%)
Query: 35 LQKL-GI--EGEMIYSIVRAFLQLSVIGFVLQFIFSQDNRGWIILAYLFMVIVAGYTAGQ 91
L KL GI E ++ + R +QL ++ +VL ++F N + I + A + +
Sbjct: 25 LVKLKGIPREKQIALATFRMTIQLVLVAYVLTYVFENSNPFYTIALITSITTFAIFNIYK 84
Query: 92 RAKHVPRGK---YVAGASILAGTAVTMLML--VVLNVFP-FTPRYIIPVAGMMVGNAMTV 145
R ++P K VA S++AG+ +L+ V++ P + P+YI+P+ GM+VGNAMT
Sbjct: 85 RV-NIPMSKELKQVAALSMVAGSIGPLLLFIFVIIGHDPWYAPQYIVPITGMLVGNAMTG 143
Query: 146 TGVTMKRLRDDIKIQLNLVETALALGATPRQATKQQVKRSLVIALSPVLDNAKTVGLISL 205
+ +++K Q +E AL LGATP++AT ++ + A+ P +++ +G+ISL
Sbjct: 144 VSLGANTFLNNMKSQRGQIEGALMLGATPKEATAPLIRDAFDSAILPTINSMVGMGIISL 203
Query: 206 PGAMTGMIMGGASPLEAIQLQIVVMNMLIGASTVSSIMSTYLCWPAFFTKAYQLE 260
PG MTG I+ G SP AIQ QI ++ + G++ + I+ L + FF K QL+
Sbjct: 204 PGMMTGQILSGVSPFTAIQYQIAIILGISGSTAFAVIIFLQLGYKTFFNKRCQLK 258
>UNIPROTKB|Q60CD9 [details] [associations]
symbol:MCA0169 "Conserved hypothetical integral membrane
protein" species:243233 "Methylococcus capsulatus str. Bath"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] HOGENOM:HOG000260833 KO:K02069
OMA:MQPTIDS InterPro:IPR005226 Pfam:PF03649 TIGRFAMs:TIGR00245
EMBL:AE017282 GenomeReviews:AE017282_GR RefSeq:YP_112706.1
GeneID:3104612 KEGG:mca:MCA0169 PATRIC:22604071 Uniprot:Q60CD9
Length = 263
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 76/232 (32%), Positives = 136/232 (58%)
Query: 38 LGIEGEMIYSIVRAFLQLSVIGFVLQFIFSQDNRGWIILAYLFMVIVAGYTAGQRAKHVP 97
L + E+ SIVR +QL+++G L+++F + +L + M++VA +T +RA
Sbjct: 30 LHLARELWLSIVRMSVQLALVGIYLKYLFEINAPALNVLWIVVMLVVADFTILRRAGLRI 89
Query: 98 RGKYVAG-ASILAGTA--VTMLMLVVLNVFP-FTPRYIIPVAGMMVGNAMTVTGVTMKRL 153
R +++ A+I+AGTA V L+L+V+ P + RY++P+AGM++GN + + ++R
Sbjct: 90 RHFFLSTLAAIVAGTAFSVAYLLLLVIRPEPIYDARYLVPLAGMILGNCLQGNVIGLERF 149
Query: 154 RDDIKIQLNLVETALALGATPRQATKQQVKRSLVIALSPVLDNAKTVGLISLPGAMTGMI 213
I+ N T L LGAT R+A + + +L +++P L + T+GL+SLPG MTG I
Sbjct: 150 YSAIRKNENEYLTYLLLGATRREAVRPYFREALKASVNPTLASMATLGLVSLPGMMTGQI 209
Query: 214 MGGASPLEAIQLQIVVMNMLIGASTVSSIMSTYLCWPAFFTKAYQLESKVFR 265
+GG+ P A++ QI +M + + +++++++ L F + L VFR
Sbjct: 210 LGGSEPWVAVKYQIAIMLCIFASMSLAAVLNLSLSLRFAFDEFGVLREAVFR 261
>UNIPROTKB|Q47WS4 [details] [associations]
symbol:CPS_4093 "Putative membrane protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0390
HOGENOM:HOG000260833 KO:K02069 OMA:MQPTIDS InterPro:IPR005226
Pfam:PF03649 RefSeq:YP_270748.1 STRING:Q47WS4 GeneID:3522538
KEGG:cps:CPS_4093 PATRIC:21471055 ProtClustDB:CLSK768226
BioCyc:CPSY167879:GI48-4106-MONOMER Uniprot:Q47WS4
Length = 238
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 58/209 (27%), Positives = 108/209 (51%)
Query: 45 IYSIVRAFLQLSVIGFVLQFIFSQDNRGWIILAYLF-MVIVAGYTAGQRAKHVPRGKYVA 103
I+++ R +QL ++GF L ++F D+ W++L L MV + + A + P+ +
Sbjct: 38 IHALARMLVQLLLVGFFLSYVFESDS-AWLVLMLLIIMVFFSSWIALNNIE-APKCELFQ 95
Query: 104 GASI-LAGTAVTMLMLVVLNVFPFTPRY----IIPVAGMMVGNAMTVTGVTMKRLRDDIK 158
A ++ ++V L+++ V +P Y +IP+AGM+ ++M ++ +R +
Sbjct: 96 RAVFAISISSVLTLLIITQGVLQLSPWYHAQTLIPLAGMVFASSMNSISLSGERFYSE-- 153
Query: 159 IQLNLVETALALGATPRQATKQQVKRSLVIALSPVLDNAKTVGLISLPGAMTGMIMGGAS 218
LA + +QA + S++ ++ +L VG++SLPG MTG I+ G S
Sbjct: 154 ---------LANKVSYKQARNIAFQASMIPNVNALL----AVGIVSLPGMMTGQILSGVS 200
Query: 219 PLEAIQLQIVVMNMLIGASTVSSIMSTYL 247
P A + QI+VM M+ ++ +SS YL
Sbjct: 201 PFIAARYQIMVMCMIFASAGISSAYFLYL 229
>TIGR_CMR|CPS_4093 [details] [associations]
symbol:CPS_4093 "putative membrane protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=ISS] EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0390 HOGENOM:HOG000260833
KO:K02069 OMA:MQPTIDS InterPro:IPR005226 Pfam:PF03649
RefSeq:YP_270748.1 STRING:Q47WS4 GeneID:3522538 KEGG:cps:CPS_4093
PATRIC:21471055 ProtClustDB:CLSK768226
BioCyc:CPSY167879:GI48-4106-MONOMER Uniprot:Q47WS4
Length = 238
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 58/209 (27%), Positives = 108/209 (51%)
Query: 45 IYSIVRAFLQLSVIGFVLQFIFSQDNRGWIILAYLF-MVIVAGYTAGQRAKHVPRGKYVA 103
I+++ R +QL ++GF L ++F D+ W++L L MV + + A + P+ +
Sbjct: 38 IHALARMLVQLLLVGFFLSYVFESDS-AWLVLMLLIIMVFFSSWIALNNIE-APKCELFQ 95
Query: 104 GASI-LAGTAVTMLMLVVLNVFPFTPRY----IIPVAGMMVGNAMTVTGVTMKRLRDDIK 158
A ++ ++V L+++ V +P Y +IP+AGM+ ++M ++ +R +
Sbjct: 96 RAVFAISISSVLTLLIITQGVLQLSPWYHAQTLIPLAGMVFASSMNSISLSGERFYSE-- 153
Query: 159 IQLNLVETALALGATPRQATKQQVKRSLVIALSPVLDNAKTVGLISLPGAMTGMIMGGAS 218
LA + +QA + S++ ++ +L VG++SLPG MTG I+ G S
Sbjct: 154 ---------LANKVSYKQARNIAFQASMIPNVNALL----AVGIVSLPGMMTGQILSGVS 200
Query: 219 PLEAIQLQIVVMNMLIGASTVSSIMSTYL 247
P A + QI+VM M+ ++ +SS YL
Sbjct: 201 PFIAARYQIMVMCMIFASAGISSAYFLYL 229
>UNIPROTKB|O53247 [details] [associations]
symbol:MT3080 "Possible conserved transmembrane protein"
species:1773 "Mycobacterium tuberculosis" [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR003439 PROSITE:PS50893
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0006200
GO:GO:0016887 EMBL:BX842581 KO:K02069 InterPro:IPR005226
Pfam:PF03649 EMBL:AL123456 PIR:C70855 RefSeq:NP_217516.1
RefSeq:NP_337594.1 RefSeq:YP_006516457.1 SMR:O53247
EnsemblBacteria:EBMYCT00000001750 EnsemblBacteria:EBMYCT00000072067
GeneID:13317800 GeneID:887271 GeneID:926682 KEGG:mtc:MT3080
KEGG:mtu:Rv3000 KEGG:mtv:RVBD_3000 PATRIC:18128540
TubercuList:Rv3000 ProtClustDB:CLSK792215 Uniprot:O53247
Length = 219
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 42/94 (44%), Positives = 61/94 (64%)
Query: 168 LALGATPRQATKQQVKRSLVIALSPVLDNAKTVGLISLPGAMTGMIMGGASPLEAIQLQI 227
L LG + R+A + +L AL P +D+ K VGLISLPGAM+G+I+ G PL AI+ QI
Sbjct: 118 LCLGQSAREAFLPHQRSALRTALIPAIDSTKVVGLISLPGAMSGLILAGVDPLTAIRYQI 177
Query: 228 VVMNMLIGASTVSSIMSTYLCWPAFFTKAYQLES 261
VVM +L+ A+ V+++ L A F +A++L S
Sbjct: 178 VVMYLLLAATAVAALTCARLAERALFDRAHRLVS 211
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.139 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 267 254 0.00084 114 3 11 22 0.36 33
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 591 (63 KB)
Total size of DFA: 149 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.46u 0.11s 18.57t Elapsed: 00:00:01
Total cpu time: 18.46u 0.11s 18.57t Elapsed: 00:00:01
Start: Fri May 10 09:43:16 2013 End: Fri May 10 09:43:17 2013