Query 024495
Match_columns 267
No_of_seqs 117 out of 1275
Neff 9.9
Searched_HMMs 46136
Date Fri Mar 29 05:01:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024495.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024495hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK09481 sspA stringent starva 100.0 4.5E-36 9.8E-41 240.8 20.0 194 1-242 11-204 (211)
2 PLN02473 glutathione S-transfe 100.0 4.4E-36 9.5E-41 241.6 18.2 207 1-240 3-211 (214)
3 PRK13972 GSH-dependent disulfi 100.0 1.2E-34 2.6E-39 233.3 20.0 198 1-241 2-206 (215)
4 KOG4420 Uncharacterized conser 100.0 2.2E-34 4.8E-39 224.0 18.8 266 1-266 27-313 (325)
5 PRK10542 glutathionine S-trans 100.0 5.3E-34 1.1E-38 227.4 18.5 194 1-240 1-197 (201)
6 KOG0406 Glutathione S-transfer 100.0 1.5E-33 3.3E-38 221.0 20.6 208 1-254 10-225 (231)
7 PLN02395 glutathione S-transfe 100.0 7.1E-34 1.5E-38 228.9 19.1 208 1-242 3-212 (215)
8 PRK15113 glutathione S-transfe 100.0 8.1E-34 1.8E-38 228.2 18.6 198 1-241 6-209 (214)
9 TIGR01262 maiA maleylacetoacet 100.0 6.3E-33 1.4E-37 222.6 20.6 202 2-241 1-205 (210)
10 COG0625 Gst Glutathione S-tran 100.0 4.7E-32 1E-36 217.7 20.6 194 1-235 1-199 (211)
11 PRK11752 putative S-transferas 100.0 5.6E-32 1.2E-36 223.5 21.2 200 1-240 45-258 (264)
12 PRK10357 putative glutathione 100.0 1.2E-31 2.6E-36 213.9 20.9 198 1-239 1-199 (202)
13 KOG0868 Glutathione S-transfer 100.0 5E-31 1.1E-35 194.3 14.6 202 2-244 7-211 (217)
14 KOG0867 Glutathione S-transfer 100.0 4.2E-30 9.2E-35 207.2 19.4 205 1-240 3-209 (226)
15 TIGR00862 O-ClC intracellular 100.0 6.8E-30 1.5E-34 205.6 20.2 194 6-252 16-232 (236)
16 PLN02378 glutathione S-transfe 100.0 6.3E-30 1.4E-34 205.3 15.8 180 5-241 16-200 (213)
17 PTZ00057 glutathione s-transfe 100.0 1.3E-29 2.8E-34 202.5 16.3 188 1-243 5-202 (205)
18 PRK10387 glutaredoxin 2; Provi 100.0 2.8E-29 6E-34 201.5 16.7 205 1-234 1-207 (210)
19 PLN02817 glutathione dehydroge 100.0 1.4E-28 3.1E-33 202.1 18.1 181 6-243 70-254 (265)
20 TIGR02182 GRXB Glutaredoxin, G 99.9 8E-27 1.7E-31 186.7 15.9 204 2-234 1-206 (209)
21 KOG1695 Glutathione S-transfer 99.9 4.7E-25 1E-29 172.2 18.3 197 1-243 4-203 (206)
22 PLN02907 glutamate-tRNA ligase 99.9 6.9E-22 1.5E-26 181.3 15.6 154 1-233 3-159 (722)
23 cd03052 GST_N_GDAP1 GST_N fami 99.8 7.5E-21 1.6E-25 125.9 8.7 73 1-73 1-73 (73)
24 cd03045 GST_N_Delta_Epsilon GS 99.8 4.5E-20 9.7E-25 122.9 8.6 74 1-74 1-74 (74)
25 KOG1422 Intracellular Cl- chan 99.8 4.1E-19 8.9E-24 135.3 14.2 192 6-250 18-215 (221)
26 cd03050 GST_N_Theta GST_N fami 99.8 1.6E-19 3.5E-24 120.9 9.4 76 1-76 1-76 (76)
27 cd03053 GST_N_Phi GST_N family 99.8 1.7E-19 3.6E-24 120.8 8.7 74 1-74 2-75 (76)
28 PF13417 GST_N_3: Glutathione 99.8 2.3E-19 5E-24 119.7 9.0 73 3-78 1-73 (75)
29 KOG3029 Glutathione S-transfer 99.8 4.8E-18 1E-22 134.5 17.6 220 1-230 91-354 (370)
30 cd03056 GST_N_4 GST_N family, 99.8 2.9E-19 6.2E-24 118.7 8.5 73 1-73 1-73 (73)
31 cd03059 GST_N_SspA GST_N famil 99.8 4.2E-19 9E-24 117.9 9.1 73 1-76 1-73 (73)
32 cd03047 GST_N_2 GST_N family, 99.8 5.3E-19 1.1E-23 117.4 8.5 73 1-73 1-73 (73)
33 cd03058 GST_N_Tau GST_N family 99.8 7.4E-19 1.6E-23 117.0 8.9 73 1-76 1-74 (74)
34 cd03048 GST_N_Ure2p_like GST_N 99.8 7.7E-19 1.7E-23 119.0 8.8 76 1-77 2-80 (81)
35 cd03057 GST_N_Beta GST_N famil 99.8 1.1E-18 2.3E-23 117.2 8.8 76 1-77 1-77 (77)
36 cd03042 GST_N_Zeta GST_N famil 99.8 9.5E-19 2E-23 116.2 8.5 73 1-73 1-73 (73)
37 cd03051 GST_N_GTT2_like GST_N 99.8 7E-19 1.5E-23 117.1 7.8 73 1-73 1-74 (74)
38 cd03041 GST_N_2GST_N GST_N fam 99.8 8.5E-19 1.9E-23 117.5 8.1 74 1-76 2-77 (77)
39 cd03046 GST_N_GTT1_like GST_N 99.8 1.7E-18 3.8E-23 115.8 9.0 76 1-77 1-76 (76)
40 PF02798 GST_N: Glutathione S- 99.8 1.3E-18 2.9E-23 116.1 8.0 74 1-74 1-76 (76)
41 cd03061 GST_N_CLIC GST_N famil 99.8 2.2E-18 4.7E-23 117.4 8.7 68 7-77 20-87 (91)
42 cd03044 GST_N_EF1Bgamma GST_N 99.8 2.4E-18 5.2E-23 114.8 8.1 72 2-74 2-74 (75)
43 cd03076 GST_N_Pi GST_N family, 99.8 1.9E-18 4.1E-23 114.5 6.7 71 1-74 2-72 (73)
44 COG2999 GrxB Glutaredoxin 2 [P 99.8 1.5E-17 3.3E-22 123.1 11.3 207 1-235 1-208 (215)
45 cd03039 GST_N_Sigma_like GST_N 99.7 3.1E-18 6.7E-23 113.4 6.5 72 1-74 1-72 (72)
46 cd03060 GST_N_Omega_like GST_N 99.7 8.3E-18 1.8E-22 110.9 8.2 68 2-72 2-70 (71)
47 cd03037 GST_N_GRX2 GST_N famil 99.7 1.5E-17 3.2E-22 109.8 7.7 70 1-74 1-71 (71)
48 cd03049 GST_N_3 GST_N family, 99.7 1.7E-17 3.6E-22 110.1 7.6 70 1-73 1-73 (73)
49 cd03075 GST_N_Mu GST_N family, 99.7 2.4E-17 5.1E-22 111.6 7.7 75 2-76 2-82 (82)
50 KOG4244 Failed axon connection 99.7 1.4E-16 3E-21 125.8 12.9 202 8-230 60-272 (281)
51 PF13409 GST_N_2: Glutathione 99.7 7.8E-17 1.7E-21 105.8 8.3 68 8-75 1-70 (70)
52 cd03055 GST_N_Omega GST_N fami 99.7 5.5E-17 1.2E-21 111.8 7.7 70 1-73 19-89 (89)
53 cd03038 GST_N_etherase_LigE GS 99.7 6E-17 1.3E-21 110.4 7.8 70 7-77 14-84 (84)
54 cd03077 GST_N_Alpha GST_N fami 99.7 1.9E-16 4.1E-21 106.5 8.3 71 1-77 2-77 (79)
55 cd03040 GST_N_mPGES2 GST_N fam 99.7 2.3E-16 5E-21 105.8 8.0 71 1-76 2-76 (77)
56 KOG3027 Mitochondrial outer me 99.7 1.9E-15 4.2E-20 114.6 13.4 210 7-230 32-247 (257)
57 cd03043 GST_N_1 GST_N family, 99.7 3.7E-16 8E-21 103.5 8.3 68 5-73 6-73 (73)
58 cd03080 GST_N_Metaxin_like GST 99.7 3.4E-16 7.3E-21 104.3 7.9 67 1-77 2-75 (75)
59 cd00570 GST_N_family Glutathio 99.6 2.1E-15 4.6E-20 98.8 8.2 71 1-73 1-71 (71)
60 COG0435 ECM4 Predicted glutath 99.6 3.5E-15 7.5E-20 118.4 9.3 215 2-262 53-307 (324)
61 cd03054 GST_N_Metaxin GST_N fa 99.6 8.9E-15 1.9E-19 96.6 7.9 65 1-75 1-72 (72)
62 cd03196 GST_C_5 GST_C family, 99.6 2E-14 4.2E-19 103.9 8.4 76 162-237 39-114 (115)
63 cd03188 GST_C_Beta GST_C famil 99.5 5.9E-14 1.3E-18 101.2 10.3 77 159-238 38-114 (114)
64 cd03204 GST_C_GDAP1 GST_C fami 99.5 3E-13 6.5E-18 96.1 10.8 78 157-234 22-111 (111)
65 cd03186 GST_C_SspA GST_N famil 99.5 1.4E-13 3E-18 98.3 9.1 76 160-237 31-106 (107)
66 cd03184 GST_C_Omega GST_C fami 99.5 6.4E-14 1.4E-18 102.8 6.5 83 160-242 28-115 (124)
67 cd03180 GST_C_2 GST_C family, 99.5 5.4E-13 1.2E-17 95.5 11.2 75 157-234 36-110 (110)
68 cd03209 GST_C_Mu GST_C family, 99.5 2.4E-13 5.3E-18 99.2 9.3 80 160-241 31-110 (121)
69 KOG2903 Predicted glutathione 99.5 1.9E-13 4.2E-18 107.5 9.1 192 2-238 39-286 (319)
70 cd03185 GST_C_Tau GST_C family 99.5 3.8E-13 8.2E-18 98.8 10.1 82 160-241 31-116 (126)
71 cd03190 GST_C_ECM4_like GST_C 99.5 2.5E-13 5.5E-18 101.9 9.0 84 157-240 30-118 (142)
72 cd03187 GST_C_Phi GST_C family 99.5 3.2E-13 6.9E-18 98.0 8.8 81 157-238 38-118 (118)
73 cd03191 GST_C_Zeta GST_C famil 99.5 8.5E-13 1.8E-17 96.3 10.7 75 163-240 43-119 (121)
74 cd03181 GST_C_EFB1gamma GST_C 99.5 1.7E-12 3.8E-17 94.9 12.0 84 158-241 34-117 (123)
75 cd03178 GST_C_Ure2p_like GST_C 99.4 6.5E-13 1.4E-17 95.7 9.5 79 158-238 34-112 (113)
76 cd03189 GST_C_GTT1_like GST_C 99.4 1.8E-12 3.9E-17 94.3 11.6 71 159-232 49-119 (119)
77 PF13410 GST_C_2: Glutathione 99.4 4.1E-13 8.9E-18 87.9 7.2 68 160-227 2-69 (69)
78 PF00043 GST_C: Glutathione S- 99.4 5.3E-13 1.2E-17 93.0 8.2 75 157-232 21-95 (95)
79 cd03182 GST_C_GTT2_like GST_C 99.4 1.1E-12 2.3E-17 95.1 9.9 76 157-234 42-117 (117)
80 cd03177 GST_C_Delta_Epsilon GS 99.4 1.7E-12 3.7E-17 94.3 10.1 76 162-240 36-112 (118)
81 cd03208 GST_C_Alpha GST_C fami 99.4 2.1E-12 4.6E-17 96.2 10.7 78 164-243 39-118 (137)
82 cd03201 GST_C_DHAR GST_C famil 99.4 1.2E-12 2.7E-17 95.2 8.2 79 163-241 29-111 (121)
83 cd03198 GST_C_CLIC GST_C famil 99.4 2E-12 4.4E-17 94.8 8.1 82 157-240 22-124 (134)
84 cd03210 GST_C_Pi GST_C family, 99.4 8.1E-12 1.7E-16 91.8 10.9 79 161-241 32-113 (126)
85 cd03207 GST_C_8 GST_C family, 99.4 2.6E-12 5.6E-17 91.0 7.7 75 162-240 28-102 (103)
86 cd03200 GST_C_JTV1 GST_C famil 99.4 5.4E-12 1.2E-16 88.0 8.6 59 167-231 38-96 (96)
87 cd03183 GST_C_Theta GST_C fami 99.3 9.1E-12 2E-16 91.5 9.4 81 157-239 38-121 (126)
88 cd03195 GST_C_4 GST_C family, 99.3 1.1E-11 2.5E-16 89.3 8.2 74 161-240 39-113 (114)
89 cd03206 GST_C_7 GST_C family, 99.3 1E-11 2.2E-16 87.4 7.7 71 161-234 30-100 (100)
90 cd03079 GST_N_Metaxin2 GST_N f 99.3 9E-12 1.9E-16 81.5 6.7 60 6-74 14-73 (74)
91 cd03203 GST_C_Lambda GST_C fam 99.3 3.9E-11 8.4E-16 87.4 10.3 69 169-240 35-111 (120)
92 cd03179 GST_C_1 GST_C family, 99.3 2.3E-11 4.9E-16 86.3 8.8 70 157-229 36-105 (105)
93 cd03194 GST_C_3 GST_C family, 99.2 4.5E-11 9.8E-16 86.1 8.4 73 161-239 41-113 (114)
94 KOG3028 Translocase of outer m 99.2 1.2E-09 2.6E-14 89.0 17.1 210 8-230 16-233 (313)
95 cd03197 GST_C_mPGES2 GST_C fam 99.2 2.9E-10 6.2E-15 84.2 11.6 136 89-230 5-145 (149)
96 cd03202 GST_C_etherase_LigE GS 99.2 1.8E-10 3.8E-15 84.4 10.4 68 161-230 55-123 (124)
97 cd03192 GST_C_Sigma_like GST_C 99.2 7.5E-11 1.6E-15 83.6 6.3 69 159-228 34-104 (104)
98 cd03193 GST_C_Metaxin GST_C fa 99.1 2.7E-10 5.8E-15 78.2 7.8 68 162-229 17-88 (88)
99 TIGR02190 GlrX-dom Glutaredoxi 99.1 4.5E-10 9.7E-15 75.3 6.9 70 1-73 10-79 (79)
100 cd00299 GST_C_family Glutathio 99.1 5.4E-10 1.2E-14 78.1 7.6 71 158-228 30-100 (100)
101 PF14497 GST_C_3: Glutathione 99.1 3.9E-10 8.4E-15 79.2 6.0 67 160-230 31-99 (99)
102 cd03078 GST_N_Metaxin1_like GS 99.0 1.5E-09 3.3E-14 71.4 7.5 65 1-75 1-72 (73)
103 cd03211 GST_C_Metaxin2 GST_C f 99.0 2.1E-09 4.6E-14 78.7 8.6 71 159-229 52-126 (126)
104 PRK10638 glutaredoxin 3; Provi 99.0 2E-09 4.2E-14 73.0 6.8 71 1-73 4-74 (83)
105 cd03212 GST_C_Metaxin1_3 GST_C 99.0 4.1E-09 8.9E-14 78.3 8.8 72 159-230 59-134 (137)
106 cd03029 GRX_hybridPRX5 Glutare 98.9 4.7E-09 1E-13 69.1 7.4 70 1-73 3-72 (72)
107 cd03205 GST_C_6 GST_C family, 98.9 4.4E-09 9.6E-14 73.6 6.8 71 155-228 28-98 (98)
108 cd03027 GRX_DEP Glutaredoxin ( 98.8 2.2E-08 4.8E-13 66.0 6.5 68 1-70 3-70 (73)
109 TIGR02196 GlrX_YruB Glutaredox 98.7 7.6E-08 1.6E-12 63.2 6.8 70 1-72 2-73 (74)
110 cd02066 GRX_family Glutaredoxi 98.7 8.3E-08 1.8E-12 62.6 6.7 69 1-71 2-70 (72)
111 cd02976 NrdH NrdH-redoxin (Nrd 98.7 5.7E-08 1.2E-12 63.7 5.9 63 1-65 2-64 (73)
112 PRK10329 glutaredoxin-like pro 98.6 1.3E-07 2.9E-12 63.5 6.4 61 1-64 3-63 (81)
113 cd03418 GRX_GRXb_1_3_like Glut 98.6 1.9E-07 4.1E-12 61.8 6.8 71 1-73 2-73 (75)
114 COG0695 GrxC Glutaredoxin and 98.6 2.4E-07 5.2E-12 62.0 6.6 72 1-72 3-74 (80)
115 TIGR02181 GRX_bact Glutaredoxi 98.5 3.8E-07 8.2E-12 61.0 7.1 72 1-74 1-72 (79)
116 PF14834 GST_C_4: Glutathione 98.5 5.6E-07 1.2E-11 62.9 7.0 76 159-240 38-114 (117)
117 TIGR02200 GlrX_actino Glutared 98.5 3.8E-07 8.3E-12 60.5 5.2 64 1-66 2-67 (77)
118 TIGR02194 GlrX_NrdH Glutaredox 98.4 6.7E-07 1.4E-11 58.7 6.0 56 1-59 1-56 (72)
119 PRK11200 grxA glutaredoxin 1; 98.3 3.4E-06 7.3E-11 57.3 7.5 74 1-76 3-83 (85)
120 TIGR02183 GRXA Glutaredoxin, G 98.3 2.7E-06 5.9E-11 57.9 6.9 74 1-76 2-82 (86)
121 PF00462 Glutaredoxin: Glutare 98.3 1.2E-06 2.5E-11 55.3 4.4 60 1-62 1-60 (60)
122 cd03419 GRX_GRXh_1_2_like Glut 98.3 3.2E-06 6.9E-11 56.8 6.9 74 1-74 2-76 (82)
123 TIGR02189 GlrX-like_plant Glut 98.2 4.2E-06 9E-11 58.5 6.6 72 1-72 10-82 (99)
124 PHA03050 glutaredoxin; Provisi 98.2 4.5E-06 9.8E-11 59.2 6.8 70 1-70 15-88 (108)
125 TIGR02180 GRX_euk Glutaredoxin 98.1 1.8E-05 4E-10 53.2 7.1 74 1-74 1-77 (84)
126 PF10568 Tom37: Outer mitochon 98.0 3E-05 6.5E-10 50.5 6.6 55 8-72 13-71 (72)
127 TIGR00365 monothiol glutaredox 98.0 3.3E-05 7.2E-10 53.7 6.8 64 7-72 25-88 (97)
128 cd03028 GRX_PICOT_like Glutare 97.9 5.3E-05 1.1E-09 51.9 6.9 65 7-73 21-85 (90)
129 PF04399 Glutaredoxin2_C: Glut 97.6 0.00015 3.3E-09 53.0 5.9 68 162-234 57-124 (132)
130 cd03199 GST_C_GRX2 GST_C famil 97.6 0.00056 1.2E-08 49.6 7.8 67 163-234 59-125 (128)
131 cd03031 GRX_GRX_like Glutaredo 97.3 0.00086 1.9E-08 50.2 6.8 71 1-73 2-82 (147)
132 PRK10824 glutaredoxin-4; Provi 97.2 0.0015 3.3E-08 46.6 6.5 64 7-72 28-91 (115)
133 PRK12759 bifunctional gluaredo 97.2 0.0012 2.6E-08 58.3 7.1 69 1-72 4-81 (410)
134 PTZ00062 glutaredoxin; Provisi 96.9 0.0042 9.2E-08 49.2 6.9 64 7-72 126-189 (204)
135 KOG1147 Glutamyl-tRNA syntheta 96.9 0.00094 2E-08 59.0 3.3 71 168-238 92-162 (712)
136 KOG1752 Glutaredoxin and relat 96.8 0.0062 1.3E-07 42.6 6.8 72 2-73 17-89 (104)
137 cd02973 TRX_GRX_like Thioredox 96.8 0.0043 9.2E-08 39.6 5.6 57 1-63 3-64 (67)
138 cd03036 ArsC_like Arsenate Red 96.7 0.0021 4.6E-08 45.8 3.9 33 1-33 1-33 (111)
139 cd02977 ArsC_family Arsenate R 96.6 0.0028 6.1E-08 44.6 4.1 32 1-32 1-32 (105)
140 PRK01655 spxA transcriptional 96.2 0.0056 1.2E-07 45.0 3.7 32 1-32 2-33 (131)
141 TIGR01617 arsC_related transcr 96.2 0.0077 1.7E-07 43.4 4.1 32 1-32 1-32 (117)
142 cd03032 ArsC_Spx Arsenate Redu 96.1 0.0075 1.6E-07 43.3 3.8 32 1-32 2-33 (115)
143 cd03035 ArsC_Yffb Arsenate Red 96.0 0.011 2.5E-07 41.6 4.1 32 1-32 1-32 (105)
144 cd03033 ArsC_15kD Arsenate Red 95.7 0.012 2.7E-07 42.0 3.5 32 1-32 2-33 (113)
145 PRK13344 spxA transcriptional 95.6 0.017 3.6E-07 42.5 3.9 33 1-33 2-34 (132)
146 PRK12559 transcriptional regul 95.6 0.018 3.9E-07 42.3 3.9 33 1-33 2-34 (131)
147 COG4545 Glutaredoxin-related p 95.2 0.059 1.3E-06 34.7 4.8 62 2-63 5-77 (85)
148 cd03030 GRX_SH3BGR Glutaredoxi 95.1 0.094 2E-06 35.9 6.0 68 1-70 2-79 (92)
149 COG1393 ArsC Arsenate reductas 94.7 0.045 9.7E-07 39.3 3.7 32 1-32 3-34 (117)
150 TIGR01616 nitro_assoc nitrogen 94.5 0.047 1E-06 39.8 3.5 32 1-32 3-34 (126)
151 PRK10026 arsenate reductase; P 94.4 0.054 1.2E-06 40.2 3.6 32 1-32 4-35 (141)
152 cd03034 ArsC_ArsC Arsenate Red 94.4 0.066 1.4E-06 38.1 4.0 32 1-32 1-32 (112)
153 COG0278 Glutaredoxin-related p 94.3 0.16 3.6E-06 34.8 5.4 67 5-73 26-93 (105)
154 TIGR00014 arsC arsenate reduct 94.2 0.077 1.7E-06 37.9 4.0 32 1-32 1-32 (114)
155 PRK10853 putative reductase; P 94.1 0.068 1.5E-06 38.5 3.6 32 1-32 2-33 (118)
156 TIGR00411 redox_disulf_1 small 93.4 0.34 7.3E-06 31.8 5.9 56 1-60 3-62 (82)
157 cd01659 TRX_superfamily Thiore 93.3 0.26 5.7E-06 29.7 5.0 53 1-56 1-58 (69)
158 TIGR00412 redox_disulf_2 small 93.2 0.55 1.2E-05 30.7 6.5 53 4-63 5-61 (76)
159 cd03026 AhpF_NTD_C TRX-GRX-lik 93.0 0.34 7.3E-06 32.9 5.4 57 1-63 16-77 (89)
160 PF05768 DUF836: Glutaredoxin- 93.0 0.35 7.5E-06 32.1 5.3 54 1-59 2-57 (81)
161 PF11801 Tom37_C: Tom37 C-term 92.5 0.39 8.4E-06 36.9 5.7 44 168-211 112-159 (168)
162 PF11287 DUF3088: Protein of u 92.4 0.43 9.2E-06 33.6 5.2 68 8-78 23-109 (112)
163 PF04908 SH3BGR: SH3-binding, 91.5 0.46 9.9E-06 33.0 4.5 70 1-72 3-87 (99)
164 PHA02125 thioredoxin-like prot 90.3 1 2.3E-05 29.2 5.3 51 1-57 2-52 (75)
165 PF13192 Thioredoxin_3: Thiore 88.9 1.8 3.9E-05 28.2 5.6 55 2-64 4-62 (76)
166 PF03960 ArsC: ArsC family; I 85.5 1 2.2E-05 31.8 3.2 29 4-32 1-29 (110)
167 KOG0911 Glutaredoxin-related p 79.8 4.7 0.0001 32.2 5.0 67 5-73 150-216 (227)
168 cd02947 TRX_family TRX family; 78.7 11 0.00024 24.4 6.3 53 2-60 15-74 (93)
169 cd02949 TRX_NTR TRX domain, no 76.2 13 0.00028 25.2 6.1 57 2-62 18-80 (97)
170 PRK15317 alkyl hydroperoxide r 72.9 2.7 5.9E-05 38.5 2.4 60 1-64 120-182 (517)
171 PF00085 Thioredoxin: Thioredo 70.9 29 0.00062 23.3 8.5 68 2-74 22-102 (103)
172 TIGR01295 PedC_BrcD bacterioci 70.5 31 0.00068 24.7 7.1 60 3-62 29-103 (122)
173 TIGR03143 AhpF_homolog putativ 70.3 11 0.00023 35.0 5.7 57 1-63 480-541 (555)
174 TIGR03140 AhpF alkyl hydropero 70.0 3.2 6.9E-05 38.0 2.2 60 1-64 121-183 (515)
175 cd02953 DsbDgamma DsbD gamma f 68.3 12 0.00027 25.6 4.5 54 2-56 16-77 (104)
176 COG3019 Predicted metal-bindin 65.7 9.3 0.0002 28.2 3.4 70 1-76 28-104 (149)
177 cd02975 PfPDO_like_N Pyrococcu 61.3 26 0.00056 24.7 5.1 49 4-56 29-80 (113)
178 cd02989 Phd_like_TxnDC9 Phosdu 60.6 47 0.001 23.4 6.3 57 2-64 27-90 (113)
179 PF09635 MetRS-N: MetRS-N bind 57.3 5.4 0.00012 28.6 1.0 26 52-77 36-63 (122)
180 cd02963 TRX_DnaJ TRX domain, D 56.5 65 0.0014 22.4 7.1 56 2-61 29-91 (111)
181 PTZ00051 thioredoxin; Provisio 56.1 53 0.0012 21.9 5.9 56 2-61 23-83 (98)
182 KOG1668 Elongation factor 1 be 55.5 7.6 0.00016 31.2 1.6 59 170-235 10-68 (231)
183 cd02984 TRX_PICOT TRX domain, 48.7 77 0.0017 21.0 6.7 57 2-62 19-81 (97)
184 TIGR02187 GlrX_arch Glutaredox 45.2 45 0.00098 26.5 4.7 52 2-57 138-192 (215)
185 TIGR02681 phage_pRha phage reg 43.7 26 0.00057 24.7 2.7 26 52-77 2-28 (108)
186 PF04134 DUF393: Protein of un 41.8 1E+02 0.0022 21.5 5.6 72 3-75 1-77 (114)
187 cd02955 SSP411 TRX domain, SSP 39.6 1.1E+02 0.0024 22.1 5.5 63 3-65 21-97 (124)
188 PHA02278 thioredoxin-like prot 39.5 1.3E+02 0.0028 20.8 6.7 61 3-63 20-86 (103)
189 cd02959 ERp19 Endoplasmic reti 38.1 1.1E+02 0.0023 21.7 5.2 57 3-63 25-91 (117)
190 TIGR01068 thioredoxin thioredo 36.4 1.2E+02 0.0027 19.8 6.9 54 3-60 20-79 (101)
191 KOG2824 Glutaredoxin-related p 36.1 58 0.0012 27.1 3.9 61 11-73 149-213 (281)
192 TIGR02187 GlrX_arch Glutaredox 34.2 1.5E+02 0.0032 23.5 6.0 55 2-60 24-88 (215)
193 PRK09381 trxA thioredoxin; Pro 33.6 1.6E+02 0.0034 20.1 7.9 56 3-62 27-88 (109)
194 PF10653 Phage-A118_gp45: Prot 32.0 49 0.0011 19.7 2.1 31 226-256 23-53 (62)
195 TIGR01764 excise DNA binding d 30.4 86 0.0019 17.5 3.2 25 49-73 24-48 (49)
196 PRK09266 hypothetical protein; 29.8 70 0.0015 26.4 3.6 59 18-76 200-258 (266)
197 PF09413 DUF2007: Domain of un 29.7 43 0.00092 20.9 1.8 31 2-32 2-32 (67)
198 cd02962 TMX2 TMX2 family; comp 29.7 2.4E+02 0.0053 21.1 6.6 57 3-63 53-122 (152)
199 cd02997 PDI_a_PDIR PDIa family 29.5 76 0.0016 21.2 3.3 53 2-56 22-80 (104)
200 KOG3425 Uncharacterized conser 29.5 2.2E+02 0.0047 20.6 5.4 66 6-74 42-121 (128)
201 cd02948 TRX_NDPK TRX domain, T 29.4 88 0.0019 21.3 3.5 54 3-61 23-83 (102)
202 cd02951 SoxW SoxW family; SoxW 29.0 2E+02 0.0043 20.2 5.5 16 2-17 19-34 (125)
203 cd03003 PDI_a_ERdj5_N PDIa fam 28.7 1.8E+02 0.004 19.4 5.6 51 2-56 23-77 (101)
204 COG3433 Aryl carrier domain [S 26.9 1.8E+02 0.004 18.8 4.4 41 192-232 28-70 (74)
205 cd02956 ybbN ybbN protein fami 26.3 2E+02 0.0042 18.9 6.6 55 3-61 18-78 (96)
206 PF11417 Inhibitor_G39P: Loade 24.0 2.1E+02 0.0045 18.4 4.9 35 64-100 5-41 (71)
207 PHA03075 glutaredoxin-like pro 23.7 1E+02 0.0022 22.0 2.9 65 1-76 5-70 (123)
208 PTZ00102 disulphide isomerase; 23.0 5E+02 0.011 23.2 8.1 71 2-76 54-138 (477)
209 cd03020 DsbA_DsbC_DsbG DsbA fa 22.2 1E+02 0.0022 24.0 3.1 20 2-21 82-101 (197)
210 COG5515 Uncharacterized conser 21.9 84 0.0018 19.5 1.9 21 1-21 3-27 (70)
211 KOG2501 Thioredoxin, nucleored 21.5 1.9E+02 0.0041 22.0 4.1 33 5-37 41-80 (157)
212 PF12728 HTH_17: Helix-turn-he 20.9 1.8E+02 0.004 16.7 3.5 26 49-74 24-49 (51)
213 PF13098 Thioredoxin_2: Thiore 20.9 75 0.0016 21.8 1.9 33 2-34 10-49 (112)
214 cd02994 PDI_a_TMX PDIa family, 20.6 2.7E+02 0.0058 18.5 5.3 51 2-56 21-76 (101)
215 cd02972 DsbA_family DsbA famil 20.6 1.3E+02 0.0029 19.3 3.1 22 1-22 1-22 (98)
216 cd04911 ACT_AKiii-YclM-BS_1 AC 20.4 1.2E+02 0.0026 19.9 2.6 22 9-30 15-36 (76)
217 PTZ00443 Thioredoxin domain-co 20.2 4.7E+02 0.01 21.1 10.4 71 2-77 57-140 (224)
No 1
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=100.00 E-value=4.5e-36 Score=240.80 Aligned_cols=194 Identities=19% Similarity=0.316 Sum_probs=157.6
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHHhcCCCC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIERISVVSS 80 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~ 80 (267)
||||+++.||+|++|+++|+++||+|+.+.+++ ++++++|+++||.|+||+|++||.+|+||.||++||++++|...
T Consensus 11 ~~Ly~~~~s~~~~rv~~~L~e~gl~~e~~~v~~---~~~~~~~~~~nP~g~VPvL~~~g~~l~ES~AIl~YL~~~~~~~~ 87 (211)
T PRK09481 11 MTLFSGPTDIYSHQVRIVLAEKGVSVEIEQVEK---DNLPQDLIDLNPYQSVPTLVDRELTLYESRIIMEYLDERFPHPP 87 (211)
T ss_pred eEEeCCCCChhHHHHHHHHHHCCCCCEEEeCCc---ccCCHHHHHhCCCCCCCEEEECCEEeeCHHHHHHHHHHhCCCCC
Confidence 689999999999999999999999999999987 45678999999999999999999999999999999999998654
Q ss_pred CCCCCcccHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHhhhcCCHH
Q 024495 81 GADDMNLSSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLREAYEIEDKLKNPE 160 (267)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (267)
..|.++.+++.+.+|+.++... + ..... .. ....+.
T Consensus 88 l~p~~~~~ra~~~~~~~~~~~~----~-------------~~~~~-----~~----------------------~~~~~~ 123 (211)
T PRK09481 88 LMPVYPVARGESRLMMHRIEKD----W-------------YSLMN-----KI----------------------VNGSAS 123 (211)
T ss_pred CCCCCHHHHHHHHHHHHHHHHH----H-------------HHHHH-----HH----------------------hcCCHH
Confidence 5557888899999998754320 0 00000 00 001233
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHHHhhhc
Q 024495 161 VLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYKMVIGN 240 (267)
Q Consensus 161 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 240 (267)
..+.....+.+.+..+|+.|++++|++|+++|+||+++++.+.++...+.+.. ...+|+|.+|+++|.++|++++++..
T Consensus 124 ~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~~~~~~~~~~~~~-~~~~p~l~~w~~~~~~rp~~~~~~~~ 202 (211)
T PRK09481 124 EADAARKQLREELLAIAPVFGEKPYFMSEEFSLVDCYLAPLLWRLPVLGIELS-GPGAKELKGYMTRVFERDSFLASLTE 202 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCcccCCCccHHHHHHHHHHHHHHhcCCCCC-CCCChhHHHHHHHHhccHHHHHHcCH
Confidence 45566778888999999999999999999999999999999988776655421 25789999999999999999999875
Q ss_pred cc
Q 024495 241 YF 242 (267)
Q Consensus 241 ~~ 242 (267)
..
T Consensus 203 ~~ 204 (211)
T PRK09481 203 AE 204 (211)
T ss_pred HH
Confidence 43
No 2
>PLN02473 glutathione S-transferase
Probab=100.00 E-value=4.4e-36 Score=241.62 Aligned_cols=207 Identities=19% Similarity=0.288 Sum_probs=162.1
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHHhcCCC-
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIERISVVS- 79 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~- 79 (267)
||||+++.||+|+||+++|.++||+|+.+.++..++++++++++++||.|+||+|++||.+|+||.||++||++.++..
T Consensus 3 ~kLy~~~~s~~~~rv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~YL~~~~~~~~ 82 (214)
T PLN02473 3 VKVYGQIKAANPQRVLLCFLEKGIEFEVIHVDLDKLEQKKPEHLLRQPFGQVPAIEDGDLKLFESRAIARYYATKYADQG 82 (214)
T ss_pred eEEecCCCCCchHHHHHHHHHcCCCceEEEecCcccccCCHHHHhhCCCCCCCeEEECCEEEEehHHHHHHHHHHcCCcC
Confidence 6999999999999999999999999999999998888899999999999999999999999999999999999998632
Q ss_pred -CCCCCCcccHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHhhhcCC
Q 024495 80 -SGADDMNLSSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLREAYEIEDKLKN 158 (267)
Q Consensus 80 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (267)
...|.++.+++++++|+..+.+...... ... ... ..+... ......
T Consensus 83 ~~l~p~~~~~ra~~~~~~~~~~~~~~~~~-----~~~---~~~----~~~~~~---------------------~~~~~~ 129 (214)
T PLN02473 83 TDLLGKTLEHRAIVDQWVEVENNYFYAVA-----LPL---VIN----LVFKPR---------------------LGEPCD 129 (214)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhcccHHH-----HHH---HHH----HHhccc---------------------ccCCCC
Confidence 3445778889999999986654211000 000 000 000000 001123
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHHHhh
Q 024495 159 PEVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYKMVI 238 (267)
Q Consensus 159 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 238 (267)
....+....++.+.++.+|+.|++++|++|+++|+||+++++.+.++........+.+.+|+|.+|+++|.++|++++++
T Consensus 130 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~~~ 209 (214)
T PLN02473 130 VALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLTHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLM 209 (214)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHHHhccccHHHHhcCHHHHHHHHHHhcChhhHHHH
Confidence 44556677889999999999999889999999999999999999876543222233678999999999999999999987
Q ss_pred hc
Q 024495 239 GN 240 (267)
Q Consensus 239 ~~ 240 (267)
+.
T Consensus 210 ~~ 211 (214)
T PLN02473 210 EL 211 (214)
T ss_pred HH
Confidence 64
No 3
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=100.00 E-value=1.2e-34 Score=233.30 Aligned_cols=198 Identities=18% Similarity=0.354 Sum_probs=155.3
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEe-----CC--EEeechHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKN-----GA--HIIFNTIEIIQYIE 73 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~-----~~--~~l~eS~aI~~yL~ 73 (267)
||||+++ +++|++|+++|+++||+|+.+.+++.+++++.++|+++||.|+||+|++ || .+|+||.||++||+
T Consensus 2 ~~Ly~~~-~~~~~~v~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~iNP~gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL~ 80 (215)
T PRK13972 2 IDLYFAP-TPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLA 80 (215)
T ss_pred eEEEECC-CCChHHHHHHHHHcCCCcEEEEecCcccccCCHHHHhhCcCCCCCEEEeCCCCCCCCceeEEcHHHHHHHHH
Confidence 5899887 7899999999999999999999999888888899999999999999996 45 48999999999999
Q ss_pred HhcCCCCCCCCCcccHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHh
Q 024495 74 RISVVSSGADDMNLSSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLREAYEIE 153 (267)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (267)
+.++.+ .|.++.+++++.+|+.+.+......+.... ... . .
T Consensus 81 ~~~~~l--~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~-------~~~------------~------------------~ 121 (215)
T PRK13972 81 EKTGLF--LSHETRERAATLQWLFWQVGGLGPMLGQNH-------HFN------------H------------------A 121 (215)
T ss_pred HhcCCC--CCCCHHHHHHHHHHHHHHhhccCcceeeee-------eee------------c------------------c
Confidence 988643 336788999999999876543222111000 000 0 0
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCch
Q 024495 154 DKLKNPEVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPS 233 (267)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~ 233 (267)
.....+...+.....+.+.|+.+|++|++++|++|+++|+||+++++.+......+.+ ...+|+|.+|+++|.++|+
T Consensus 122 ~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~~---~~~~P~l~~w~~r~~~rp~ 198 (215)
T PRK13972 122 APQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRID---LAMYPAVKNWHERIRSRPA 198 (215)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhccCccccCCCCCHHHHHHHHHHHHHhhcCCc---chhCHHHHHHHHHHHhCHH
Confidence 0012234455566778899999999999899999999999999998877554444433 5789999999999999999
Q ss_pred HHHhhhcc
Q 024495 234 YKMVIGNY 241 (267)
Q Consensus 234 ~~~~~~~~ 241 (267)
+++.+.+.
T Consensus 199 ~~~~~~~~ 206 (215)
T PRK13972 199 TGQALLKA 206 (215)
T ss_pred HHHHHHHh
Confidence 99987653
No 4
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=100.00 E-value=2.2e-34 Score=223.98 Aligned_cols=266 Identities=33% Similarity=0.470 Sum_probs=215.5
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHHhcCCCC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIERISVVSS 80 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~ 80 (267)
|.||++|.|-.|+|||+++.||||+|+...|++..|+++++||.++||.|.||||++|+.+|.|+..|+.|++++|.+..
T Consensus 27 ~vLyhhpysf~sQkVrlvi~EK~id~~~y~V~l~~geh~epwFmrlNp~gevPVl~~g~~II~d~tqIIdYvErtf~ger 106 (325)
T KOG4420|consen 27 LVLYHHPYSFSSQKVRLVIAEKGIDCEEYDVSLPQGEHKEPWFMRLNPGGEVPVLIHGDNIISDYTQIIDYVERTFTGER 106 (325)
T ss_pred ceeeecCcccccceeeeehhhcccccceeeccCccccccCchheecCCCCCCceEecCCeecccHHHHHHHHHHhhcccc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999874321
Q ss_pred --CCCCCcccHHHHH-----HHHHHhhhcCC------ccccccCCchh--hhhhhHHHHHHHHHHHhhcCcchHHHHHHH
Q 024495 81 --GADDMNLSSREVV-----QWMHKIQQWDP------KFFTLDRIPEK--YRLYTSKFIRRVVIARMAESPDLASAYHRK 145 (267)
Q Consensus 81 --~~~~~~~~~~~~~-----~~~~~~~~~~~------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (267)
.+.-++.+-.++. .|+--++.+.+ .++....+|.. ++....+.............++.++.++.+
T Consensus 107 ~l~pe~~S~~~d~~l~~e~~l~~lpm~~~t~g~~lh~eL~~~s~iP~~~~iR~~~~k~~~~v~~l~~~e~pdla~ay~ak 186 (325)
T KOG4420|consen 107 VLMPEVGSLQHDRVLQYEELLDALPMDAYTHGCILHPELTTDSMIPKYAEIRRHLAKATTDVMKLDHEEEPDLAEAYLAK 186 (325)
T ss_pred cccccccccccHHHHHHHHHHHhcCcchhhccccccchhhccccCcccHHHHHHHHHHHHHHHHHHhhcCchhhHHHHHH
Confidence 1112222222222 22323344433 34444444443 355666667777788888889999999999
Q ss_pred HHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHccC----CceeccCCCchhHHHHHHHHHHHhhcCCcchhhc--CCC
Q 024495 146 LREAYEIEDKLKNPEVLKWSKEHLVRLLDEVETKLND----TAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYIS--CRP 219 (267)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~----~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~--~~p 219 (267)
++..+.....-.+....+.....+...|+.+|+.|.+ ..|+||+.+|+||+.+.++++++...|......+ ..|
T Consensus 187 qkkl~~kl~~hdd~s~lkkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~e~~yw~~gsrp 266 (325)
T KOG4420|consen 187 QKKLMAKLLEHDDVSYLKKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGLEKKYWEDGSRP 266 (325)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcccHHHhcccCCCc
Confidence 9987765555566778889999999999999999987 5799999999999999999999999998755444 789
Q ss_pred cHHHHHHHHhcCchHHHhhhcccccHHHHHHHHHhhhhHhhhhchhc
Q 024495 220 NIAEYWVLMQQRPSYKMVIGNYFDGWRKYKTLLKTWCFVRIRSMLRR 266 (267)
Q Consensus 220 ~l~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (267)
+|..|+.|+.+|++|++.++..+..+....-.-+..++++-++.++-
T Consensus 267 nle~Yf~rvrrR~sf~kvlg~~fnilr~~~~~~ktp~~~~~~~l~g~ 313 (325)
T KOG4420|consen 267 NLESYFERVRRRFSFRKVLGDIFNILRFRLVKRKTPSFFGASFLMGS 313 (325)
T ss_pred cHHHHHHHHHhhhHHHHhhhhHHHHHHHHHHHhcCchhhhHHHHHHH
Confidence 99999999999999999999999998877777788888887776653
No 5
>PRK10542 glutathionine S-transferase; Provisional
Probab=100.00 E-value=5.3e-34 Score=227.35 Aligned_cols=194 Identities=22% Similarity=0.342 Sum_probs=154.2
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCC-CcchhhhhhCCCCcccEEE-eCCEEeechHHHHHHHHHhcCC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGK-NMDTSFFRMNPRAKLPVLK-NGAHIIFNTIEIIQYIERISVV 78 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~-~~~~~~~~~~p~~~vP~L~-~~~~~l~eS~aI~~yL~~~~~~ 78 (267)
|+||+++.| ++++++++|+++||+|+.+.+++.+++ ..+++|+++||.|+||+|+ +||.+|+||.+|++||++.++.
T Consensus 1 m~l~~~~~s-~~~~~~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~nP~g~vPvL~~~~g~~l~eS~aI~~YL~~~~~~ 79 (201)
T PRK10542 1 MKLFYKPGA-CSLASHITLRESGLDFTLVSVDLAKKRLENGDDYLAINPKGQVPALLLDDGTLLTEGVAIMQYLADSVPD 79 (201)
T ss_pred CceeecccH-HHHHHHHHHHHcCCCceEEEeecccccccCChHHHHhCcCCCCCeEEeCCCcEeecHHHHHHHHHHhCcc
Confidence 799999866 899999999999999999999987664 4568999999999999998 6889999999999999999874
Q ss_pred CC-CCCCCcccHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHhhhcC
Q 024495 79 SS-GADDMNLSSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLREAYEIEDKLK 157 (267)
Q Consensus 79 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (267)
.. ..|.++.+++++++|+.++.......+. .... ...
T Consensus 80 ~~l~~p~~~~~ra~~~~~~~~~~~~~~~~~~---------------------~~~~---------------------~~~ 117 (201)
T PRK10542 80 RQLLAPVGSLSRYHTIEWLNYIATELHKGFT---------------------PLFR---------------------PDT 117 (201)
T ss_pred cccCCCCCcHHHHHHHHHHHHHHhhhhhhhh---------------------hccC---------------------CCC
Confidence 33 2245678899999998865431100000 0000 001
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHHHh
Q 024495 158 NPEVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYKMV 237 (267)
Q Consensus 158 ~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~ 237 (267)
.+...+...+.+.+.|+.+|+.|++++|++|+++|+||+++++.+.+....+.+ ...+|+|.+|+++|.++|+++++
T Consensus 118 ~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~---~~~~p~l~~w~~~~~~~p~~k~~ 194 (201)
T PRK10542 118 PEEYKPTVRAQLEKKFQYVDEALADEQWICGQRFTIADAYLFTVLRWAYAVKLN---LEGLEHIAAYMQRVAERPAVAAA 194 (201)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCCcHHhHHHHHHHHHhhccCCC---cccchHHHHHHHHHHcCHHHHHH
Confidence 122334566778899999999999889999999999999999999888766554 56799999999999999999999
Q ss_pred hhc
Q 024495 238 IGN 240 (267)
Q Consensus 238 ~~~ 240 (267)
+..
T Consensus 195 ~~~ 197 (201)
T PRK10542 195 LKA 197 (201)
T ss_pred HHH
Confidence 865
No 6
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-33 Score=220.97 Aligned_cols=208 Identities=20% Similarity=0.206 Sum_probs=170.2
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhC-CCCcccEEEeCCEEeechHHHHHHHHHhcC-C
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMN-PRAKLPVLKNGAHIIFNTIEIIQYIERISV-V 78 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~-p~~~vP~L~~~~~~l~eS~aI~~yL~~~~~-~ 78 (267)
++||++..|||++|++++|++|||+|+.+..|.. ++++++++.| +.++||||+++|..|+||..|++|||+.+| +
T Consensus 10 vrL~~~w~sPfa~R~~iaL~~KgI~yE~veedl~---~Ks~~ll~~np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~~ 86 (231)
T KOG0406|consen 10 VKLLGMWFSPFAQRVRIALKLKGIPYEYVEEDLT---NKSEWLLEKNPVHKKVPVLEHNGKPICESLIIVEYIDETWPSG 86 (231)
T ss_pred EEEEEeecChHHHHHHHHHHhcCCceEEEecCCC---CCCHHHHHhccccccCCEEEECCceehhhHHHHHHHHhhccCC
Confidence 4799999999999999999999999999999984 4799999999 689999999999999999999999999999 5
Q ss_pred CCCCCCCcccHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHhhhcCC
Q 024495 79 SSGADDMNLSSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLREAYEIEDKLKN 158 (267)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (267)
.+..|.||.+|++.+.|..++++.... .. ... -....
T Consensus 87 ~~iLP~DPy~Ra~arfwa~~id~~~~~---~~-------------------~~~---------------------~~~~~ 123 (231)
T KOG0406|consen 87 PPILPSDPYERAQARFWAEYIDKKVFF---VG-------------------RFV---------------------VAAKG 123 (231)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhHHHH---HH-------------------HHH---------------------HhhcC
Confidence 777889999999999999998862100 00 000 00133
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcc-CCceeccCCCchhHHHHHHHHHHHhhcC-----CcchhhcCCCcHHHHHHHHhcCc
Q 024495 159 PEVLKWSKEHLVRLLDEVETKLN-DTAYLAGEEFTMADVMLIPVFSRLKLLD-----LEDEYISCRPNIAEYWVLMQQRP 232 (267)
Q Consensus 159 ~~~~~~~~~~~~~~l~~le~~L~-~~~~l~G~~~t~AD~~l~~~l~~~~~~~-----~~~~~~~~~p~l~~w~~~~~~~p 232 (267)
.+..+...+.+...|+.+|+.|. +++|++|+++++.|+++++.+.++.... ...-....+|+|.+|.++|.++|
T Consensus 124 ~e~~~~~~~e~~e~l~~lE~el~k~k~~fgG~~~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~~ 203 (231)
T KOG0406|consen 124 GEEQEAAKEELREALKVLEEELGKGKDFFGGETIGFVDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKEDE 203 (231)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCHhhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcCh
Confidence 35667778888999999999999 8899999999999999997776654431 11111467999999999999999
Q ss_pred hHHHhhhcccccHHHHHHHHHh
Q 024495 233 SYKMVIGNYFDGWRKYKTLLKT 254 (267)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~ 254 (267)
++++++.+.....+.++.+.+.
T Consensus 204 ~V~~~~p~~e~~~e~~~~~~~~ 225 (231)
T KOG0406|consen 204 AVKAVLPDSEKVVEFMKKYRQG 225 (231)
T ss_pred hHHhhcCCHHHHHHHHHHHHHh
Confidence 9999999877766666666554
No 7
>PLN02395 glutathione S-transferase
Probab=100.00 E-value=7.1e-34 Score=228.94 Aligned_cols=208 Identities=21% Similarity=0.374 Sum_probs=158.4
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHHhcCCC-
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIERISVVS- 79 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~- 79 (267)
+|||+.+.| +++||+++|.++|++|+.+.++...+++++++|++.||.|+||+|+++|.+|+||.+|++||++.++..
T Consensus 3 ~~ly~~~~~-~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~ES~aI~~YL~~~~~~~~ 81 (215)
T PLN02395 3 LKVYGPAFA-SPKRALVTLIEKGVEFETVPVDLMKGEHKQPEYLALQPFGVVPVIVDGDYKIFESRAIMRYYAEKYRSQG 81 (215)
T ss_pred EEEEcCCcC-cHHHHHHHHHHcCCCceEEEeccccCCcCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHHHcCCCC
Confidence 589997654 799999999999999999999998888888999999999999999999999999999999999988632
Q ss_pred -CCCCCCcccHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHhhhcCC
Q 024495 80 -SGADDMNLSSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLREAYEIEDKLKN 158 (267)
Q Consensus 80 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (267)
...|.++.+++++++|+.+++..... ..... .....+.... .....
T Consensus 82 ~~l~p~~~~~~~~~~~~~~~~~~~~~~--------~~~~~----~~~~~~~~~~---------------------~~~~~ 128 (215)
T PLN02395 82 PDLLGKTIEERGQVEQWLDVEATSYHP--------PLLNL----TLHILFASKM---------------------GFPAD 128 (215)
T ss_pred cCcCCCChhHHHHHHHHHHHHHHhcCc--------hHHHH----HHHHHhhhhc---------------------cCCCc
Confidence 24457888999999999866532110 00000 0000000000 00122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHHHhh
Q 024495 159 PEVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYKMVI 238 (267)
Q Consensus 159 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 238 (267)
++..+...+.+.+.++.+|++|++++|++|+++|+||+++++++.++.........+..+|+|.+|++++.++|++++++
T Consensus 129 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~rp~~k~~~ 208 (215)
T PLN02395 129 EKVIKESEEKLAKVLDVYEARLSKSKYLAGDFVSLADLAHLPFTEYLVGPIGKAYLIKDRKHVSAWWDDISSRPAWKEVL 208 (215)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccCCCcCHHHHHHHHHHHHHhcccchhhhhccCchHHHHHHHHHcChHHHHHH
Confidence 34455667889999999999999889999999999999999988776432111123677999999999999999999998
Q ss_pred hccc
Q 024495 239 GNYF 242 (267)
Q Consensus 239 ~~~~ 242 (267)
.++.
T Consensus 209 ~~~~ 212 (215)
T PLN02395 209 AKYS 212 (215)
T ss_pred HHhc
Confidence 7653
No 8
>PRK15113 glutathione S-transferase; Provisional
Probab=100.00 E-value=8.1e-34 Score=228.22 Aligned_cols=198 Identities=19% Similarity=0.182 Sum_probs=155.2
Q ss_pred CeeecCC--CChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHHhcCC
Q 024495 1 MQLYHHP--YSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIERISVV 78 (267)
Q Consensus 1 ~~Ly~~~--~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~ 78 (267)
|+||+++ .||+|++|+++|.++||+|+.+.+++.++++..++|+++||.|+||+|++||.+|+||.||++||++.++.
T Consensus 6 ~~Ly~~~~~~s~~~~rv~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~g~VP~L~~~~~~l~ES~aI~~YL~~~~~~ 85 (214)
T PRK15113 6 ITLYSDAHFFSPYVMSAFVALQEKGLPFELKTVDLDAGEHLQPTYQGYSLTRRVPTLQHDDFELSESSAIAEYLEERFAP 85 (214)
T ss_pred EEEEeCCCCCCchHHHHHHHHHHcCCCCeEEEeCCCCccccCHHHHhcCCCCCCCEEEECCEEEecHHHHHHHHHHHcCC
Confidence 5899976 79999999999999999999999999888888899999999999999999999999999999999999875
Q ss_pred CC---CCCCCcccHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHhhh
Q 024495 79 SS---GADDMNLSSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLREAYEIEDK 155 (267)
Q Consensus 79 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (267)
.. ..|.++.+++++++|+.+++......+.... ... .+ ..
T Consensus 86 ~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~--------~~~----~~-------------------------~~ 128 (214)
T PRK15113 86 PAWERIYPADLQARARARQIQAWLRSDLMPLREERP--------TDV----VF-------------------------AG 128 (214)
T ss_pred CCccccCCCCHHHHHHHHHHHHHHHhhhHHHhccCc--------cch----hc-------------------------cC
Confidence 43 5567889999999999877531100000000 000 00 00
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHccC-CceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchH
Q 024495 156 LKNPEVLKWSKEHLVRLLDEVETKLND-TAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSY 234 (267)
Q Consensus 156 ~~~~~~~~~~~~~~~~~l~~le~~L~~-~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 234 (267)
.......+...+.+.+.++.+|++|++ ++|++|+ +|+||+++++++.++...+.. + .|+|.+|+++|.++|++
T Consensus 129 ~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~l~G~-~TlADi~l~~~l~~~~~~~~~---~--~p~l~~~~~r~~~rp~~ 202 (214)
T PRK15113 129 AKKAPLSEAGKAAAEKLFAVAERLLAPGQPNLFGE-WCIADTDLALMLNRLVLHGDE---V--PERLADYATFQWQRASV 202 (214)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHhcCCCEeeCC-ccHHHHHHHHHHHHHHHcCCC---C--CHHHHHHHHHHhcCHHH
Confidence 011223445566788999999999974 5799996 999999999999887665443 2 28999999999999999
Q ss_pred HHhhhcc
Q 024495 235 KMVIGNY 241 (267)
Q Consensus 235 ~~~~~~~ 241 (267)
++++++.
T Consensus 203 ~~~~~~~ 209 (214)
T PRK15113 203 QRWLALS 209 (214)
T ss_pred HHHHHHh
Confidence 9998764
No 9
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=100.00 E-value=6.3e-33 Score=222.60 Aligned_cols=202 Identities=19% Similarity=0.270 Sum_probs=155.6
Q ss_pred eeecCCCChhHHHHHHHHHhcCCceEEEEeCCC-CCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHHhcCCCC
Q 024495 2 QLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPI-TGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIERISVVSS 80 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~-~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~ 80 (267)
+||+++.||+|++||++|.++||+|+.+.+++. .++++.+++.+.||+|+||+|+++|.+|+||.+|++||++.++...
T Consensus 1 ~Ly~~~~s~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~yl~~~~~~~~ 80 (210)
T TIGR01262 1 KLYSYWRSSCSYRVRIALALKGIDYEYVPVNLLRDGEQRSPEFLALNPQGLVPTLDIDGEVLTQSLAIIEYLEETYPDPP 80 (210)
T ss_pred CcccCCCCCchHHHHHHHHHCCCCceEEecccccccccCChhhhhcCCCCcCCEEEECCEEeecHHHHHHHHHHhCCCCC
Confidence 589999999999999999999999999999873 3456678899999999999999999999999999999999987544
Q ss_pred CCCCCcccHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHhhhcCCHH
Q 024495 81 GADDMNLSSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLREAYEIEDKLKNPE 160 (267)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (267)
..|.++.+++.+.+|+..+....+..+. ... .. .+.. ........
T Consensus 81 l~p~~~~~~a~~~~~~~~~~~~~~~~~~----~~~--------~~-~~~~----------------------~~~~~~~~ 125 (210)
T TIGR01262 81 LLPADPIKRARVRALALLIACDIHPLNN----LRV--------LQ-YLRE----------------------KLGVEEEA 125 (210)
T ss_pred CCCCCHHHHHHHHHHHHHHhcccChhhh----hhH--------HH-HHHh----------------------hcCCCHHH
Confidence 4457888999999998866421110000 000 00 0000 00001122
Q ss_pred HHHHHHHHHHHHHHHHHHHccC--CceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHHHhh
Q 024495 161 VLKWSKEHLVRLLDEVETKLND--TAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYKMVI 238 (267)
Q Consensus 161 ~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 238 (267)
..+...+.+.+.|+.+|++|++ ++|++|+++|+||+++++++.+....+.. ...+|+|.+|+++|.++|++++++
T Consensus 126 ~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~ADi~~~~~l~~~~~~~~~---~~~~p~l~~~~~~~~~rp~~~~~~ 202 (210)
T TIGR01262 126 RNRWYQHWISKGFAALEALLQPHAGAFCVGDTPTLADLCLVPQVYNAERFGVD---LTPYPTLRRIAAALAALPAFQRAH 202 (210)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCEeeCCCCCHHHHHHHHHHHHHHHcCCC---cccchHHHHHHHHHhcCHHHHHhC
Confidence 3344556788999999999985 56999999999999999999887655443 578999999999999999999998
Q ss_pred hcc
Q 024495 239 GNY 241 (267)
Q Consensus 239 ~~~ 241 (267)
...
T Consensus 203 ~~~ 205 (210)
T TIGR01262 203 PEN 205 (210)
T ss_pred ccc
Confidence 764
No 10
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.7e-32 Score=217.66 Aligned_cols=194 Identities=27% Similarity=0.393 Sum_probs=155.9
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCE-EeechHHHHHHHHHhcCCC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAH-IIFNTIEIIQYIERISVVS 79 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~-~l~eS~aI~~yL~~~~~~~ 79 (267)
|+||+++.||+|+||+++|.++|++|+.+.+++.. +++.++|+.+||.|+||+|+++|. +|+||.||++||++++|..
T Consensus 1 ~~L~~~~~sp~~~kv~l~l~e~g~~ye~~~v~~~~-~~~~~~~~~~nP~gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~~ 79 (211)
T COG0625 1 MKLYGSPTSPYSRKVRLALEEKGLPYEIVLVDLDA-EQKPPDFLALNPLGKVPALVDDDGEVLTESGAILEYLAERYPGP 79 (211)
T ss_pred CeeecCCCCcchHHHHHHHHHcCCCceEEEeCccc-ccCCHHHHhcCCCCCCCEEeeCCCCeeecHHHHHHHHHhhCCCC
Confidence 79999999999999999999999999999999987 788999999999999999997765 9999999999999999864
Q ss_pred CCCCCCcc---cHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHhhhc
Q 024495 80 SGADDMNL---SSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLREAYEIEDKL 156 (267)
Q Consensus 80 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (267)
...|.++. .++.+..|+.+++.. +...... ..... .....
T Consensus 80 ~l~p~~~~~r~~r~~~~~~~~~~~~~---------~~~~~~~--------~~~~~--------------------~~~~~ 122 (211)
T COG0625 80 PLLPADPLARRARALLLWWLFFAASD---------LHPVIGQ--------RRRAL--------------------LGSEP 122 (211)
T ss_pred CcCCCCchhHHHHHHHHHHHHHHHhc---------ccHHHHH--------HHhhh--------------------ccccc
Confidence 34445664 777777888765321 1110000 00000 00001
Q ss_pred C-CHHHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHH
Q 024495 157 K-NPEVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYK 235 (267)
Q Consensus 157 ~-~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~ 235 (267)
. .....+...+.+.+.++.+|+.|++++|++|+++|+||+++++.+.++...+.. ...+|++.+|+++|.++|+++
T Consensus 123 ~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~tiAD~~~~~~~~~~~~~~~~---~~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 123 ELLEAALEAARAEIRALLALLEALLADGPYLAGDRFTIADIALAPLLWRLALLGEE---LADYPALKAWYERVLARPAFR 199 (211)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHhhhcCcc---cccChHHHHHHHHHHcCCchh
Confidence 1 456777888899999999999999999999999999999999999997766655 378999999999999999965
No 11
>PRK11752 putative S-transferase; Provisional
Probab=100.00 E-value=5.6e-32 Score=223.47 Aligned_cols=200 Identities=23% Similarity=0.317 Sum_probs=153.6
Q ss_pred CeeecCCCChhHHHHHHHHHhc------CCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeC----CEEeechHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEK------NIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNG----AHIIFNTIEIIQ 70 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~------gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~----~~~l~eS~aI~~ 70 (267)
|+||+.+ ||+|++|+++|+++ |++|+.+.+++.++++.+++|+++||.|+||+|+++ |.+|+||.||++
T Consensus 45 ~~Ly~~~-s~~~~rV~i~L~e~~~~~~~gl~ye~~~v~~~~~~~~~~e~~~iNP~GkVP~Lv~~dg~~~~~L~ES~AIl~ 123 (264)
T PRK11752 45 LQLYSLG-TPNGQKVTIMLEELLALGVKGAEYDAWLIRIGEGDQFSSGFVEINPNSKIPALLDRSGNPPIRVFESGAILL 123 (264)
T ss_pred eEEecCC-CCchHHHHHHHHHHHhccCCCCceEEEEecCccccccCHHHHhhCCCCCCCEEEeCCCCCCeEEEcHHHHHH
Confidence 6899976 99999999999997 899999999998888889999999999999999964 379999999999
Q ss_pred HHHHhcCCCCCCCCCcccHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHHHH
Q 024495 71 YIERISVVSSGADDMNLSSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLREAY 150 (267)
Q Consensus 71 yL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (267)
||++.++.+. |.++.+++++++|+.++.... +.. ...+ ... +
T Consensus 124 YL~~~~~~L~--P~~~~era~v~~wl~~~~~~~---------~~~----~~~~-----~~~------------------~ 165 (264)
T PRK11752 124 YLAEKFGAFL--PKDLAARTETLNWLFWQQGSA---------PFL----GGGF-----GHF------------------Y 165 (264)
T ss_pred HHHHhcCCcC--CCCHHHHHHHHHHHHHHhhhh---------hHH----HHHH-----HHH------------------H
Confidence 9999987543 468889999999998654210 000 0000 000 0
Q ss_pred HHhhhcCCHHHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcC---C-cchhhcCCCcHHHHHH
Q 024495 151 EIEDKLKNPEVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLD---L-EDEYISCRPNIAEYWV 226 (267)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~---~-~~~~~~~~p~l~~w~~ 226 (267)
.. .....+...+....++.+.|+.+|++|++++|++|+++|+|||++++.+.++.... . .......+|+|.+|++
T Consensus 166 ~~-~~~~~~~~~~~~~~~~~~~L~~le~~L~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~ 244 (264)
T PRK11752 166 AY-APEKIEYAINRFTMEAKRQLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAK 244 (264)
T ss_pred Hh-CCccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHH
Confidence 00 00122334455667788999999999998899999999999999999887764421 1 1011467999999999
Q ss_pred HHhcCchHHHhhhc
Q 024495 227 LMQQRPSYKMVIGN 240 (267)
Q Consensus 227 ~~~~~p~~~~~~~~ 240 (267)
+|.++|++++++..
T Consensus 245 rv~~rPs~k~~~~~ 258 (264)
T PRK11752 245 EIAERPAVKRGRIV 258 (264)
T ss_pred HHHhCHHHHHHHhc
Confidence 99999999998765
No 12
>PRK10357 putative glutathione S-transferase; Provisional
Probab=100.00 E-value=1.2e-31 Score=213.86 Aligned_cols=198 Identities=21% Similarity=0.222 Sum_probs=152.3
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEE-eCCEEeechHHHHHHHHHhcCCC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK-NGAHIIFNTIEIIQYIERISVVS 79 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~-~~~~~l~eS~aI~~yL~~~~~~~ 79 (267)
|+||+++.||++++|+++|+++||+|+.+.++...+ ++++...||.|+||+|+ ++|.+++||.+|++||++.++..
T Consensus 1 ~~Ly~~~~s~~~~~v~~~L~~~gv~ye~~~~~~~~~---~~~~~~~nP~g~vP~L~~~~g~~l~eS~aI~~yL~~~~~~~ 77 (202)
T PRK10357 1 MKLIGSYTSPFVRKISILLLEKGITFEFVNELPYNA---DNGVAQYNPLGKVPALVTEEGECWFDSPIIAEYIELLNVAP 77 (202)
T ss_pred CeeecCCCCchHHHHHHHHHHcCCCCeEEecCCCCC---chhhhhcCCccCCCeEEeCCCCeeecHHHHHHHHHHhCCCC
Confidence 799999999999999999999999999998887554 45677789999999998 67899999999999999988654
Q ss_pred CCCCCCcccHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHhhhcCCH
Q 024495 80 SGADDMNLSSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLREAYEIEDKLKNP 159 (267)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (267)
...|.++.+++.+++|..+++..... .. .... . .+. ......+
T Consensus 78 ~l~p~~~~~~a~~~~~~~~~~~~~~~---------~~-----~~~~----~------------------~~~-~~~~~~~ 120 (202)
T PRK10357 78 AMLPRDPLAALRVRQLEALADGIMDA---------AL-----VSVR----E------------------QAR-PAAQQSE 120 (202)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHH---------HH-----HHHH----H------------------HhC-ccccccH
Confidence 44557788889999988765431000 00 0000 0 000 0011234
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHHHhhh
Q 024495 160 EVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYKMVIG 239 (267)
Q Consensus 160 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~ 239 (267)
...+....++.+.|+.+|++|++++ ++|+++|+||+++++.+.++.....+..+...+|+|.+|++++.+||+++++..
T Consensus 121 ~~~~~~~~~l~~~l~~le~~L~~~~-l~Gd~~t~ADi~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~i~~rp~~~~~~~ 199 (202)
T PRK10357 121 DELLRQREKINRSLDALEGYLVDGT-LKTDTVNLATIAIACAVGYLNFRRVAPGWCVDRPHLVKLVENLFQRESFARTEP 199 (202)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCc-ccCCCcCHHHHHHHHHHHHHHhcccCcchhhcChHHHHHHHHHhcChhhhhcCC
Confidence 4556677889999999999998878 999999999999999998776543332234679999999999999999998754
No 13
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=5e-31 Score=194.33 Aligned_cols=202 Identities=21% Similarity=0.265 Sum_probs=164.1
Q ss_pred eeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCC-CcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHHhcCCCC
Q 024495 2 QLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGK-NMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIERISVVSS 80 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~-~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~ 80 (267)
.||++-.|.|++|||++|..|||+|+...++..+++ +.+.+|.+.||.++||+|++||.+|+||.||+.||++.+|..+
T Consensus 7 iLYSYWrSSCswRVRiALaLK~iDYey~PvnLlk~~~q~~~ef~~iNPm~kVP~L~i~g~tl~eS~AII~YLeEt~P~pp 86 (217)
T KOG0868|consen 7 ILYSYWRSSCSWRVRIALALKGIDYEYKPVNLLKEEDQSDSEFKEINPMEKVPTLVIDGLTLTESLAIIEYLEETYPDPP 86 (217)
T ss_pred hhhhhhcccchHHHHHHHHHcCCCcceeehhhhcchhhhhhHHhhcCchhhCCeEEECCEEeehHHHHHHHHHhcCCCCC
Confidence 689888888999999999999999999999998874 4467899999999999999999999999999999999999988
Q ss_pred CCCCCcccHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHhhhcCCHH
Q 024495 81 GADDMNLSSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLREAYEIEDKLKNPE 160 (267)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (267)
..|.++..|+.+++....+.. .+.+. +...+...+ ++. ....
T Consensus 87 LLP~d~~KRA~~r~i~~~i~s---------gIQPl--------QNl~vl~~l--------------------~ek-~~~~ 128 (217)
T KOG0868|consen 87 LLPKDPHKRAKARAISLLIAS---------GIQPL--------QNLSVLKML--------------------NEK-EPGY 128 (217)
T ss_pred CCCcCHHHHHHHHHHHHHHHh---------CCCcc--------hhhHHHHHh--------------------ccc-ccch
Confidence 888999999999998875532 11110 000000000 011 2222
Q ss_pred HHHHHHHHHHHHHHHHHHHcc--CCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHHHhh
Q 024495 161 VLKWSKEHLVRLLDEVETKLN--DTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYKMVI 238 (267)
Q Consensus 161 ~~~~~~~~~~~~l~~le~~L~--~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 238 (267)
...+....+.+.|..||+.|. .|.|.+||++|+||+++.+.+........+ ++.||.+.+..+.+...|+|+.+.
T Consensus 129 ~~~W~q~~ItkGF~ALEklL~~~aGkycvGDevtiADl~L~pqv~nA~rf~vd---l~PYPti~ri~e~l~elpaFq~ah 205 (217)
T KOG0868|consen 129 GDQWAQHFITKGFTALEKLLKSHAGKYCVGDEVTIADLCLPPQVYNANRFHVD---LTPYPTITRINEELAELPAFQAAH 205 (217)
T ss_pred hhHHHHHHHHHhHHHHHHHHHHccCCcccCceeehhhhccchhhhhhhhcccc---CCcCchHHHHHHHHHhCHHHHhcC
Confidence 255667778889999999996 568999999999999999999998887777 899999999999999999999988
Q ss_pred hccccc
Q 024495 239 GNYFDG 244 (267)
Q Consensus 239 ~~~~~~ 244 (267)
.+-.+.
T Consensus 206 P~nQPD 211 (217)
T KOG0868|consen 206 PDNQPD 211 (217)
T ss_pred CCCCCC
Confidence 765543
No 14
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=4.2e-30 Score=207.17 Aligned_cols=205 Identities=22% Similarity=0.323 Sum_probs=165.1
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHHhcC-CC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIERISV-VS 79 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~~~~-~~ 79 (267)
|+||+++.|+.|++|.+++.++|++|+.+.++...|++++++|+++||.|+||+|+++|..++||.||+.||.+++. ..
T Consensus 3 ~~ly~~~~s~~~r~vl~~~~~~~l~~e~~~v~~~~ge~~~pefl~~nP~~kVP~l~d~~~~l~eS~AI~~Yl~~ky~~~~ 82 (226)
T KOG0867|consen 3 LKLYGHLGSPPARAVLIAAKELGLEVELKPVDLVKGEQKSPEFLKLNPLGKVPALEDGGLTLWESHAILRYLAEKYGPLG 82 (226)
T ss_pred ceEeecCCCcchHHHHHHHHHcCCceeEEEeeccccccCCHHHHhcCcCCCCCeEecCCeEEeeHHHHHHHHHHHcCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999998775 22
Q ss_pred C-CCCCCcccHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHhhhcCC
Q 024495 80 S-GADDMNLSSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLREAYEIEDKLKN 158 (267)
Q Consensus 80 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (267)
. ..|.+..+++.+++|+.+-++....... .+.+... ... .....
T Consensus 83 ~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~-------~~~~~~p--------~~~--------------------~~~~~ 127 (226)
T KOG0867|consen 83 GILLPKDLKERAIVDQWLEFENGVLDPVTF-------ERPILAP--------LLV--------------------GLPLN 127 (226)
T ss_pred cccCCcCHHHHHHHHHHHHhhhcccccccc-------cceeeec--------cee--------------------cccCc
Confidence 2 4568889999999999765543222110 0000000 000 00135
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHHHhh
Q 024495 159 PEVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYKMVI 238 (267)
Q Consensus 159 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 238 (267)
....+.....+.+.++.+|..|.++.|+.|+++|+||+.+.+.+..+...........++|++.+|++++.++|++++..
T Consensus 128 ~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g~~~tlADl~~~~~~~~~~~~~~~~~~~~~~p~v~~W~~~~~~~P~~~e~~ 207 (226)
T KOG0867|consen 128 PTAVKELEAKLRKALDNLERFLKTQVYLAGDQLTLADLSLASTLSQFQGKFATEKDFEKYPKVARWYERIQKRPAYEEAN 207 (226)
T ss_pred chhhHHHHHHHHHHHHHHHHHHccCCcccCCcccHHHHHHhhHHHHHhHhhhhhhhhhhChHHHHHHHHHHhCccHHHHH
Confidence 56778888899999999999999999999999999999999999988421112233788999999999999999988877
Q ss_pred hc
Q 024495 239 GN 240 (267)
Q Consensus 239 ~~ 240 (267)
..
T Consensus 208 ~~ 209 (226)
T KOG0867|consen 208 EK 209 (226)
T ss_pred HH
Confidence 65
No 15
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.97 E-value=6.8e-30 Score=205.55 Aligned_cols=194 Identities=16% Similarity=0.178 Sum_probs=140.9
Q ss_pred CCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHHhcCCCCCCCCC
Q 024495 6 HPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIERISVVSSGADDM 85 (267)
Q Consensus 6 ~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~~~~~~ 85 (267)
.+.||+|++|+++|.++||+|+.+.+++.+ ++++|+++||.|+||+|+++|.+|+||.+|++||++.++....++..
T Consensus 16 ~~~cp~~~rv~i~L~ekgi~~e~~~vd~~~---~~~~fl~inP~g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~ 92 (236)
T TIGR00862 16 IGNCPFSQRLFMILWLKGVVFNVTTVDLKR---KPEDLQNLAPGTHPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLS 92 (236)
T ss_pred CCCCHhHHHHHHHHHHcCCCcEEEEECCCC---CCHHHHHHCcCCCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCC
Confidence 468999999999999999999999999964 47999999999999999999999999999999999988532111112
Q ss_pred cccHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHhhhcCCHHHHHHH
Q 024495 86 NLSSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLREAYEIEDKLKNPEVLKWS 165 (267)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (267)
+.+........+. +..+.. +. . ...+...+..
T Consensus 93 p~~~~~~~~~~~l---------------------~~~~~~--~~---~----------------------~~~~~~~~~~ 124 (236)
T TIGR00862 93 PKHPESNTAGLDI---------------------FAKFSA--YI---K----------------------NSNPEANDNL 124 (236)
T ss_pred CCCHHHHHHHHHH---------------------HHHHHH--HH---H----------------------cCCHHHHHHH
Confidence 2221110000000 000000 00 0 0112233344
Q ss_pred HHHHHHHHHHHHHHcc------------------CCceeccCCCchhHHHHHHHHHHHhhc-----CCcchhhcCCCcHH
Q 024495 166 KEHLVRLLDEVETKLN------------------DTAYLAGEEFTMADVMLIPVFSRLKLL-----DLEDEYISCRPNIA 222 (267)
Q Consensus 166 ~~~~~~~l~~le~~L~------------------~~~~l~G~~~t~AD~~l~~~l~~~~~~-----~~~~~~~~~~p~l~ 222 (267)
.+.+.+.+..||+.|+ +++|+.|+++|+|||++++.+.++... +.+ ....+|+|.
T Consensus 125 ~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~--i~~~~p~l~ 202 (236)
T TIGR00862 125 EKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFD--IPAEFTGVW 202 (236)
T ss_pred HHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHHHHHHHHHhCcC--ccccCchHH
Confidence 5567888889998886 579999999999999999999998854 333 258899999
Q ss_pred HHHHHHhcCchHHHhhhcccccHHHHHHHH
Q 024495 223 EYWVLMQQRPSYKMVIGNYFDGWRKYKTLL 252 (267)
Q Consensus 223 ~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 252 (267)
+|++++.++|+|++++.....-...+....
T Consensus 203 ~w~~~~~~~~sf~~t~p~~~~i~~~~~~~~ 232 (236)
T TIGR00862 203 RYLSNAYAREEFTNTCPDDKEIELAYADVA 232 (236)
T ss_pred HHHHHHhccchHHhhCCChHHHHHHHHHHh
Confidence 999999999999999877655555555543
No 16
>PLN02378 glutathione S-transferase DHAR1
Probab=99.97 E-value=6.3e-30 Score=205.29 Aligned_cols=180 Identities=21% Similarity=0.242 Sum_probs=133.7
Q ss_pred cCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHHhcCCCCCCCC
Q 024495 5 HHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIERISVVSSGADD 84 (267)
Q Consensus 5 ~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~~~~~ 84 (267)
+++.||+|+||+++|+++|++|+.+.+++.+ ++++|+++||.|+||+|++||.+|+||.+|++||+++++.... .
T Consensus 16 ~~~~~p~~~rv~~~L~e~gl~~e~~~v~~~~---~~~~~l~inP~G~VPvL~~~~~~l~ES~aI~~YL~~~~~~~~l--~ 90 (213)
T PLN02378 16 HLGDCPFSQRALLTLEEKSLTYKIHLINLSD---KPQWFLDISPQGKVPVLKIDDKWVTDSDVIVGILEEKYPDPPL--K 90 (213)
T ss_pred CCCCCcchHHHHHHHHHcCCCCeEEEeCccc---CCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHhCCCCCC--C
Confidence 4567999999999999999999999999854 4779999999999999999999999999999999999875433 2
Q ss_pred CcccHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHhhhcCCHHHHHH
Q 024495 85 MNLSSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLREAYEIEDKLKNPEVLKW 164 (267)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (267)
++.+++.+...+.. . ...+ .. . .. ..+.
T Consensus 91 ~~~~~a~i~~~~~~----------------~----~~~~--------~~-------------------~---~~--~~~~ 118 (213)
T PLN02378 91 TPAEFASVGSNIFG----------------T----FGTF--------LK-------------------S---KD--SNDG 118 (213)
T ss_pred CHHHHHHHHHHHHH----------------H----HHHH--------Hh-------------------c---CC--hhhH
Confidence 34444433322110 0 0000 00 0 00 0112
Q ss_pred HHHHHHHHHHHHHHHcc--CCceeccCCCchhHHHHHHHHHHHhhc-CC--cchhhcCCCcHHHHHHHHhcCchHHHhhh
Q 024495 165 SKEHLVRLLDEVETKLN--DTAYLAGEEFTMADVMLIPVFSRLKLL-DL--EDEYISCRPNIAEYWVLMQQRPSYKMVIG 239 (267)
Q Consensus 165 ~~~~~~~~l~~le~~L~--~~~~l~G~~~t~AD~~l~~~l~~~~~~-~~--~~~~~~~~p~l~~w~~~~~~~p~~~~~~~ 239 (267)
....+.+.|+.+|++|+ +++|++|+++|+||+++++.+.++... +. .......+|+|.+|+++|.++|++++.+.
T Consensus 119 ~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~rpa~~~~~~ 198 (213)
T PLN02378 119 SEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFSLDSFEKTKT 198 (213)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcCCCchhHhHHHHHHHHHHhcCCCeecccC
Confidence 23566778999999997 579999999999999999998876532 11 11124679999999999999999998876
Q ss_pred cc
Q 024495 240 NY 241 (267)
Q Consensus 240 ~~ 241 (267)
.-
T Consensus 199 ~~ 200 (213)
T PLN02378 199 EE 200 (213)
T ss_pred Ch
Confidence 53
No 17
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.97 E-value=1.3e-29 Score=202.46 Aligned_cols=188 Identities=18% Similarity=0.266 Sum_probs=134.5
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhh--------hhCCCCcccEEEeCCEEeechHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFF--------RMNPRAKLPVLKNGAHIIFNTIEIIQYI 72 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~--------~~~p~~~vP~L~~~~~~l~eS~aI~~yL 72 (267)
++||+++.++++++||++|+++||+|+.+.++. +.+ .+. +.||+|+||+|++||.+|+||.||++||
T Consensus 5 ~~L~y~~~~~~~~~vrl~L~~~gi~ye~~~~~~----~~~-~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~eS~AI~~YL 79 (205)
T PTZ00057 5 IVLYYFDARGKAELIRLIFAYLGIEYTDKRFGE----NGD-AFIEFKNFKKEKDTPFEQVPILEMDNIIFAQSQAIVRYL 79 (205)
T ss_pred eEEEecCCCcchHHHHHHHHHcCCCeEEEeccc----cch-HHHHHHhccccCCCCCCCCCEEEECCEEEecHHHHHHHH
Confidence 689999999999999999999999999986632 222 332 4799999999999999999999999999
Q ss_pred HHhcCCCCCCCCCcccHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHH
Q 024495 73 ERISVVSSGADDMNLSSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLREAYEI 152 (267)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (267)
++.++.. + .+ ..+++..|+.... . ..+... +. .. ..+
T Consensus 80 a~~~~~~-~--~~--~~~~~~~~~~~~~-~------------------~~~~~~-~~----------~~------~~~-- 116 (205)
T PTZ00057 80 SKKYKIC-G--ES--ELNEFYADMIFCG-V------------------QDIHYK-FN----------NT------NLF-- 116 (205)
T ss_pred HHHcCCC-C--CC--HHHHHHHHHHHHH-H------------------HHHHHH-Hh----------hh------HHH--
Confidence 9998632 2 22 3333333332110 0 000000 00 00 000
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHHHccC--CceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhc
Q 024495 153 EDKLKNPEVLKWSKEHLVRLLDEVETKLND--TAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQ 230 (267)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 230 (267)
.+...+...+.+.+.++.+|+.|++ ++|++|+++|+||+++++++.++.... + ..+..+|+|.+|+++|++
T Consensus 117 -----~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~~~~~~-~-~~l~~~P~l~~~~~r~~~ 189 (205)
T PTZ00057 117 -----KQNETTFLNEELPKWSGYFENILKKNHCNYFVGDNLTYADLAVFNLYDDIETKY-P-NSLKNFPLLKAHNEFISN 189 (205)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeCCcccHHHHHHHHHHHHHHHhC-h-hhhccChhHHHHHHHHHh
Confidence 0011234557788999999999974 389999999999999999988875321 1 126889999999999999
Q ss_pred CchHHHhhhcccc
Q 024495 231 RPSYKMVIGNYFD 243 (267)
Q Consensus 231 ~p~~~~~~~~~~~ 243 (267)
+|++++++++...
T Consensus 190 ~P~~k~y~~~~~~ 202 (205)
T PTZ00057 190 LPNIKNYISNRKE 202 (205)
T ss_pred ChHHHHHHHhCCC
Confidence 9999999987653
No 18
>PRK10387 glutaredoxin 2; Provisional
Probab=99.97 E-value=2.8e-29 Score=201.47 Aligned_cols=205 Identities=17% Similarity=0.217 Sum_probs=139.2
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEE-eCCEEeechHHHHHHHHHhcCCC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK-NGAHIIFNTIEIIQYIERISVVS 79 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~-~~~~~l~eS~aI~~yL~~~~~~~ 79 (267)
||||+++.||+|+||+++|+++||+|+.+.++.. ++.. ..+.||.++||+|+ +||.+|+||.+|++||+++++..
T Consensus 1 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~~~~~--~~~~--~~~~~p~~~VPvL~~~~g~~l~eS~aI~~yL~~~~~~~ 76 (210)
T PRK10387 1 MKLYIYDHCPFCVKARMIFGLKNIPVELIVLAND--DEAT--PIRMIGQKQVPILQKDDGSYMPESLDIVHYIDELDGKP 76 (210)
T ss_pred CEEEeCCCCchHHHHHHHHHHcCCCeEEEEcCCC--chhh--HHHhcCCcccceEEecCCeEecCHHHHHHHHHHhCCCc
Confidence 7999999999999999999999999999887643 2222 25789999999995 88999999999999999999753
Q ss_pred CCCCCCcccHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHH-HHHHHhhhcCC
Q 024495 80 SGADDMNLSSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLR-EAYEIEDKLKN 158 (267)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 158 (267)
... +.+++.+++|+.++.......+............ .......+....+ ...+ ..+..
T Consensus 77 ~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~--~~~~~ 136 (210)
T PRK10387 77 LLT---GKRSPAIEEWLRKVFGYLNKLLYPRFAKADLPEF---------------ATPSARQYFIDKKEASIG--DFDAL 136 (210)
T ss_pred cCC---CcccHHHHHHHHHHHHHhhcchhcccccCCCccc---------------CCHHHHHHHHHhHHhccC--CHHHH
Confidence 221 2467888999887653222111110000000000 0000000100000 0000 00001
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchH
Q 024495 159 PEVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSY 234 (267)
Q Consensus 159 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 234 (267)
.+..+...+.+.+.|+.+|++|++ +|++|+++|+||+++++.+.++...+. ...+|+|.+|++||.+||++
T Consensus 137 ~~~~~~~~~~~~~~l~~le~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~~~----~~~~p~l~~w~~r~~~r~~~ 207 (210)
T PRK10387 137 LAHTPGLIKEINADLRALDPLIVK-PNAVNGELSTDDIHLFPILRNLTLVKG----IEWPPRVADYRDNMSKKTQV 207 (210)
T ss_pred HhcCHHHHHHHHHHHHHHHHHhcC-ccccCCCCCHHHHHHHHHHhcceeecC----CCCCHHHHHHHHHHHHHhCC
Confidence 112245667889999999999987 999999999999999999999876432 12369999999999999986
No 19
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.96 E-value=1.4e-28 Score=202.12 Aligned_cols=181 Identities=20% Similarity=0.219 Sum_probs=136.1
Q ss_pred CCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHHhcCCCCCCCCC
Q 024495 6 HPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIERISVVSSGADDM 85 (267)
Q Consensus 6 ~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~~~~~~ 85 (267)
...||+|++++++|+++||+|+.+.+++. +++++|+++||.|+||+|+++|.+|+||.+|++||++.++...+ .+
T Consensus 70 ~g~cp~s~rV~i~L~ekgi~ye~~~vdl~---~~~~~fl~iNP~GkVPvL~~d~~~L~ES~aI~~YL~e~~p~~~L--~~ 144 (265)
T PLN02817 70 LGDCPFCQRVLLTLEEKHLPYDMKLVDLT---NKPEWFLKISPEGKVPVVKLDEKWVADSDVITQALEEKYPDPPL--AT 144 (265)
T ss_pred CCCCcHHHHHHHHHHHcCCCCEEEEeCcC---cCCHHHHhhCCCCCCCEEEECCEEEecHHHHHHHHHHHCCCCCC--CC
Confidence 44699999999999999999999999884 45789999999999999999899999999999999999986444 34
Q ss_pred cccHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHhhhcCCHHHHHHH
Q 024495 86 NLSSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLREAYEIEDKLKNPEVLKWS 165 (267)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (267)
+.+++.+.+++... +. ..+.. ... .+..
T Consensus 145 ~~era~i~~~l~~~-----------------------~~-----~~~~~----------------------~~~--~~~~ 172 (265)
T PLN02817 145 PPEKASVGSKIFST-----------------------FI-----GFLKS----------------------KDP--GDGT 172 (265)
T ss_pred HHHHHHHHHHHHHH-----------------------HH-----HHhcc----------------------CCc--chHH
Confidence 66666665543200 00 00000 000 0111
Q ss_pred HHHHHHHHHHHHHHcc-CCceeccCCCchhHHHHHHHHHHHhhc-CC--cchhhcCCCcHHHHHHHHhcCchHHHhhhcc
Q 024495 166 KEHLVRLLDEVETKLN-DTAYLAGEEFTMADVMLIPVFSRLKLL-DL--EDEYISCRPNIAEYWVLMQQRPSYKMVIGNY 241 (267)
Q Consensus 166 ~~~~~~~l~~le~~L~-~~~~l~G~~~t~AD~~l~~~l~~~~~~-~~--~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~ 241 (267)
.+.+.+.++.+|+.|+ +++|++|+++|+||+++++.+.++... +. +......+|+|.+|+++|.++|+++++....
T Consensus 173 ~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i~~~~P~L~~w~~ri~~rps~~~~~~~~ 252 (265)
T PLN02817 173 EQALLDELTSFDDYIKENGPFINGEKISAADLSLGPKLYHLEIALGHYKNWSVPDSLPFVKSYMKNIFSMESFVKTRALP 252 (265)
T ss_pred HHHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHhcchhHhhcCCCH
Confidence 2456677899999997 469999999999999999999876542 11 1111467899999999999999999988754
Q ss_pred cc
Q 024495 242 FD 243 (267)
Q Consensus 242 ~~ 243 (267)
.+
T Consensus 253 ~~ 254 (265)
T PLN02817 253 ED 254 (265)
T ss_pred HH
Confidence 33
No 20
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.95 E-value=8e-27 Score=186.67 Aligned_cols=204 Identities=16% Similarity=0.249 Sum_probs=134.5
Q ss_pred eeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEE-eCCEEeechHHHHHHHHHhcCCCC
Q 024495 2 QLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK-NGAHIIFNTIEIIQYIERISVVSS 80 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~-~~~~~l~eS~aI~~yL~~~~~~~~ 80 (267)
|||++..||+|+|||++|.++|++|+.+.++. +++. ...+.||.|+||+|+ +||.+++||.+|++||+++++...
T Consensus 1 ~Ly~~~~sp~~~kvr~~L~~~gl~~e~~~~~~--~~~~--~~~~~np~g~vP~l~~~~g~~l~es~~I~~yL~~~~~~~~ 76 (209)
T TIGR02182 1 KLYIYDHCPFCVRARMIFGLKNIPVEKHVLLN--DDEE--TPIRMIGAKQVPILQKDDGRAMPESLDIVAYFDKLDGEPL 76 (209)
T ss_pred CeecCCCCChHHHHHHHHHHcCCCeEEEECCC--Ccch--hHHHhcCCCCcceEEeeCCeEeccHHHHHHHHHHhCCCcc
Confidence 69999999999999999999999999876543 2322 247899999999998 889999999999999999986522
Q ss_pred CCCCCcccHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHhhhcCCHH
Q 024495 81 GADDMNLSSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLREAYEIEDKLKNPE 160 (267)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (267)
. .+..+..+.+|+.++..+....+...+.......+.. +.. ..+....+ ............
T Consensus 77 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~-~~~~~~~~-~~~~g~~~~~~~ 137 (209)
T TIGR02182 77 L---TGKVSPEIEAWLRKVTGYANKLLLPRFAKSDLPEFAT--------------QSA-RKYFTDKK-EASAGNFSALLN 137 (209)
T ss_pred C---CCCChHHHHHHHHHHHHHhhhhhccccccCCCcccCC--------------HHH-HHHHHHHH-HHhcCCHHHHHc
Confidence 2 2335678888888765533221111100000000000 000 00000000 000000000001
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCC-cHHHHHHHHhcCchH
Q 024495 161 VLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRP-NIAEYWVLMQQRPSY 234 (267)
Q Consensus 161 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p-~l~~w~~~~~~~p~~ 234 (267)
..+...+.+.+.|+.+|++|++++|++| ++|+||+++++.+.++...+. . .+| +|.+|++||.+++++
T Consensus 138 ~~~~~~~~~~~~l~~le~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~~~----~-~~p~~l~~w~~Ri~ar~~~ 206 (209)
T TIGR02182 138 HTPGLLEEINADLEELDKLIDGPNAVNG-ELSEDDILVFPLLRNLTLVAG----I-NWPSRVADYLDNMSKKSKV 206 (209)
T ss_pred cCHHHHHHHHHHHHHHHHHHhCccccCC-CCCHHHHHHHHHhcCeeeecC----C-CCChHHHHHHHHHHHHhCC
Confidence 1234567788899999999999999965 699999999999988775432 1 245 999999999998875
No 21
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=4.7e-25 Score=172.19 Aligned_cols=197 Identities=16% Similarity=0.216 Sum_probs=150.4
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHHhcCCCC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIERISVVSS 80 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~ 80 (267)
+||+|++..+++..+|++++..|++|++..+....+ -.......|+|++|+|..||..|.||.||++||+++++ +.
T Consensus 4 ykL~Yf~~RG~ae~iR~lf~~a~v~fEd~r~~~~~~---w~~~K~~~pfgqlP~l~vDg~~i~QS~AI~RyLArk~g-l~ 79 (206)
T KOG1695|consen 4 YKLTYFNIRGLAEPIRLLFAYAGVSFEDKRITMEDA---WEELKDKMPFGQLPVLEVDGKKLVQSRAILRYLARKFG-LA 79 (206)
T ss_pred eEEEecCcchhHHHHHHHHHhcCCCcceeeeccccc---hhhhcccCCCCCCCEEeECCEeeccHHHHHHHHHHHhC-cC
Confidence 489999999999999999999999999999988651 12233448999999999999999999999999999995 33
Q ss_pred CCCCCcccHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHhhhcCCHH
Q 024495 81 GADDMNLSSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLREAYEIEDKLKNPE 160 (267)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (267)
+ .++.+.++++...+.+.+.....+. ..+...+.+..+.
T Consensus 80 G--kt~~E~a~vD~i~d~~~D~~~~~~~---------------------------------------~~~~~~~~g~~~~ 118 (206)
T KOG1695|consen 80 G--KTEEEEAWVDMIVDQFKDFRWEIFR---------------------------------------QPYTAPEAGKSEE 118 (206)
T ss_pred C--CCHHHHHHHHHHHHhhhhHHHHHHH---------------------------------------Hhhhhhhhccchh
Confidence 3 7899999999988866552111000 0000011112222
Q ss_pred HHH-HHHHHHHHHHHHHHHHcc--CCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHHHh
Q 024495 161 VLK-WSKEHLVRLLDEVETKLN--DTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYKMV 237 (267)
Q Consensus 161 ~~~-~~~~~~~~~l~~le~~L~--~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~ 237 (267)
..+ .......+.+..+++.|. ++.|++||++|+||++++..+..+... ........+|+|.++.+++.++|.++++
T Consensus 119 ~~~~~~~Pa~~~~~~~~~~~L~~~~sgflvGd~lT~aDl~i~e~l~~l~~~-~~~~~~~~~P~L~a~~~kv~~~p~ik~~ 197 (206)
T KOG1695|consen 119 ELDKLYLPAKPKYFKILEKILKKNKSGFLVGDKLTWADLVIAEHLDTLEEL-LDPSALDHFPKLKAFKERVSSIPNIKKY 197 (206)
T ss_pred hhhhhhccchHHHHHHHHHHHHhCCCCeeecCcccHHHHHHHHHHHHHHHh-cCchhhccChHHHHHHHHHhcCchHHHH
Confidence 222 455567778889999987 567999999999999999999998874 2223367789999999999999999999
Q ss_pred hhcccc
Q 024495 238 IGNYFD 243 (267)
Q Consensus 238 ~~~~~~ 243 (267)
++....
T Consensus 198 i~~r~~ 203 (206)
T KOG1695|consen 198 LESRPV 203 (206)
T ss_pred HhcCCC
Confidence 987653
No 22
>PLN02907 glutamate-tRNA ligase
Probab=99.88 E-value=6.9e-22 Score=181.30 Aligned_cols=154 Identities=16% Similarity=0.190 Sum_probs=124.5
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEE-eCCEEeechHHHHHHHHHhcCCC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK-NGAHIIFNTIEIIQYIERISVVS 79 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~-~~~~~l~eS~aI~~yL~~~~~~~ 79 (267)
|+||+.+.| .+.++.++|++.|++|+.+. .+|.|+||+|+ ++|.+|+||.||++||++.++..
T Consensus 3 ~kLy~~~~S-~~~~v~~~L~~lgv~~e~~~---------------~~p~GkVPvLv~ddG~~L~ES~AIl~YLa~~~p~~ 66 (722)
T PLN02907 3 AKLSFPPDS-PPLAVIAAAKVAGVPLTIDP---------------SLKSGSAPTLLFSSGEKLTGTNVLLRYIARSASLP 66 (722)
T ss_pred EEEEECCCC-ChHHHHHHHHHcCCCcEEee---------------cCCCCCCcEEEECCCCEEECHHHHHHHHHHhCCCc
Confidence 589999877 57789999999999999853 25899999999 58899999999999999998765
Q ss_pred CCCCCCcccHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHhhhcCCH
Q 024495 80 SGADDMNLSSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLREAYEIEDKLKNP 159 (267)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (267)
...|.++.+++++.+|+.++... ..
T Consensus 67 ~L~p~d~~erAqV~qWL~~~~~~------------------------------------------------------~~- 91 (722)
T PLN02907 67 GFYGQDAFESSQVDEWLDYAPTF------------------------------------------------------SS- 91 (722)
T ss_pred CCCCCCHHHHHHHHHHHHHHhhc------------------------------------------------------cc-
Confidence 55567888999999999854320 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHh--hcCCcchhhcCCCcHHHHHHHHhcCch
Q 024495 160 EVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLK--LLDLEDEYISCRPNIAEYWVLMQQRPS 233 (267)
Q Consensus 160 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~--~~~~~~~~~~~~p~l~~w~~~~~~~p~ 233 (267)
...+.+.++.+|++|++++||+|+++|+||+++++.+.... ..... ....+|+|.+|+++|.++|+
T Consensus 92 ------~~~l~~~L~~LE~~L~~rtYLvGd~lTLADIaL~~~L~~~~~~~~~~~--~~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 92 ------GSEFENACEYVDGYLASRTFLVGYSLTIADIAIWSGLAGSGQRWESLR--KSKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred ------HHHHHHHHHHHHHHhccCCeecCCCCCHHHHHHHHHHHhhhhhhhccc--ccccCHHHHHHHHHHHhCCC
Confidence 01244578999999999999999999999999999886651 12221 25789999999999999999
No 23
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.84 E-value=7.5e-21 Score=125.87 Aligned_cols=73 Identities=38% Similarity=0.668 Sum_probs=69.8
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIE 73 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~ 73 (267)
++||+++.|++|++|+++|+++|++|+.+.+++..++++.++|.++||.|+||+|++||.+++||.+|++||+
T Consensus 1 ~~ly~~~~s~~s~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~inP~g~vP~L~~~g~~l~Es~aI~~yLe 73 (73)
T cd03052 1 LVLYHWTQSFSSQKVRLVIAEKGLRCEEYDVSLPLSEHNEPWFMRLNPTGEVPVLIHGDNIICDPTQIIDYLE 73 (73)
T ss_pred CEEecCCCCccHHHHHHHHHHcCCCCEEEEecCCcCccCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 5899999999999999999999999999999998888888999999999999999999999999999999985
No 24
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=99.82 E-value=4.5e-20 Score=122.94 Aligned_cols=74 Identities=22% Similarity=0.481 Sum_probs=70.4
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIER 74 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~ 74 (267)
|+||+++.||+|++++++|+++|++|+.+.+++..+++..+++.+.||.+++|+|+++|.+++||.||++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 1 IDLYYLPGSPPCRAVLLTAKALGLELNLKEVNLMKGEHLKPEFLKLNPQHTVPTLVDNGFVLWESHAILIYLVE 74 (74)
T ss_pred CEEEeCCCCCcHHHHHHHHHHcCCCCEEEEecCccCCcCCHHHHhhCcCCCCCEEEECCEEEEcHHHHHHHHhC
Confidence 79999999999999999999999999999999887777889999999999999999999999999999999974
No 25
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.82 E-value=4.1e-19 Score=135.26 Aligned_cols=192 Identities=17% Similarity=0.177 Sum_probs=142.4
Q ss_pred CCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHHhcCCCCCCCCC
Q 024495 6 HPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIERISVVSSGADDM 85 (267)
Q Consensus 6 ~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~~~~~~ 85 (267)
...||+|+++.+.|.++|++|.++.||+ ..++++|+++.|.+++|+|..++..++||..|-++|++..+.....-..
T Consensus 18 ~Gdcpf~qr~~m~L~~k~~~f~vttVd~---~~kp~~f~~~sp~~~~P~l~~d~~~~tDs~~Ie~~Lee~l~~p~~~~~~ 94 (221)
T KOG1422|consen 18 LGDCPFCQRLFMTLELKGVPFKVTTVDL---SRKPEWFLDISPGGKPPVLKFDEKWVTDSDKIEEFLEEKLPPPKLPTLA 94 (221)
T ss_pred CCCChhHHHHHHHHHHcCCCceEEEeec---CCCcHHHHhhCCCCCCCeEEeCCceeccHHHHHHHHHHhcCCCCCcccC
Confidence 3579999999999999999999999999 4558999999999999999999999999999999999998755442111
Q ss_pred cccHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHhhhcCCHHHHHHH
Q 024495 86 NLSSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLREAYEIEDKLKNPEVLKWS 165 (267)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (267)
+.+.+.+-. + ++.+|.. ... ...+..-+..
T Consensus 95 ~~E~asag~--d---------------------iF~kF~~-----fi~----------------------ksk~~~n~~~ 124 (221)
T KOG1422|consen 95 PPESASAGS--D---------------------IFAKFSA-----FIK----------------------KSKDAANDGL 124 (221)
T ss_pred CHHHHhhHH--H---------------------HHHHHHH-----HHh----------------------CchhhccchH
Confidence 333222111 0 0000000 000 0223344556
Q ss_pred HHHHHHHHHHHHHHccC---CceeccCCCchhHHHHHHHHHHHhhcCC---cchhhcCCCcHHHHHHHHhcCchHHHhhh
Q 024495 166 KEHLVRLLDEVETKLND---TAYLAGEEFTMADVMLIPVFSRLKLLDL---EDEYISCRPNIAEYWVLMQQRPSYKMVIG 239 (267)
Q Consensus 166 ~~~~~~~l~~le~~L~~---~~~l~G~~~t~AD~~l~~~l~~~~~~~~---~~~~~~~~p~l~~w~~~~~~~p~~~~~~~ 239 (267)
...+.+.|..|+.+|.. ++|+.||++|.||+.+.|-|+-++.... +....+..+.+.+|++++.++.+|.....
T Consensus 125 e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~k~yk~~~IP~~lt~V~rYl~~~ya~d~F~~tcp 204 (221)
T KOG1422|consen 125 EKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAAKHYKNFEIPASLTGVWRYLKNAYARDEFTNTCP 204 (221)
T ss_pred HHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHHHHHhcCCCCchhhhHHHHHHHHHHhHHHhhcCCc
Confidence 66777888999999974 7999999999999999999998877532 12235678999999999999999988877
Q ss_pred cccccHHHHHH
Q 024495 240 NYFDGWRKYKT 250 (267)
Q Consensus 240 ~~~~~~~~~~~ 250 (267)
+...-..+|+.
T Consensus 205 ~d~ei~~~y~~ 215 (221)
T KOG1422|consen 205 ADQEIILAYAP 215 (221)
T ss_pred hHHHHHHhhhh
Confidence 65554444444
No 26
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=99.81 E-value=1.6e-19 Score=120.87 Aligned_cols=76 Identities=22% Similarity=0.458 Sum_probs=71.3
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHHhc
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIERIS 76 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~~~ 76 (267)
|+||+++.|++|++++++|+++|++|+.+.++...+++..+++.+.||.+++|+|+++|.+++||.||++||++.+
T Consensus 1 ~~ly~~~~s~~~~~v~~~l~~~g~~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~Yl~~~~ 76 (76)
T cd03050 1 LKLYYDLMSQPSRAVYIFLKLNKIPFEECPIDLRKGEQLTPEFKKINPFGKVPAIVDGDFTLAESVAILRYLARKF 76 (76)
T ss_pred CEEeeCCCChhHHHHHHHHHHcCCCcEEEEecCCCCCcCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 6899999999999999999999999999999988777777899999999999999999999999999999998764
No 27
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=99.81 E-value=1.7e-19 Score=120.81 Aligned_cols=74 Identities=28% Similarity=0.512 Sum_probs=70.0
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIER 74 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~ 74 (267)
|+||+++.||+|++++++|+++|++|+.+.++...++++.++|.+.||.+++|+|+++|.+++||.||++||++
T Consensus 2 ~~Ly~~~~s~~s~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~P~~~vP~l~~~g~~l~es~aI~~yL~~ 75 (76)
T cd03053 2 LKLYGAAMSTCVRRVLLCLEEKGVDYELVPVDLTKGEHKSPEHLARNPFGQIPALEDGDLKLFESRAITRYLAE 75 (76)
T ss_pred eEEEeCCCChhHHHHHHHHHHcCCCcEEEEeCccccccCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHhh
Confidence 68999999999999999999999999999999877777788999999999999999999999999999999986
No 28
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=99.80 E-value=2.3e-19 Score=119.67 Aligned_cols=73 Identities=41% Similarity=0.622 Sum_probs=68.5
Q ss_pred eecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHHhcCC
Q 024495 3 LYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIERISVV 78 (267)
Q Consensus 3 Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~ 78 (267)
||+++.||+|+|+|++|+++||+|+.+.+++.. ..+++...||.++||+|++||.+++||.+|++||++.+++
T Consensus 1 Ly~~~~Sp~~~kv~~~l~~~~i~~~~~~v~~~~---~~~~~~~~~p~~~vPvL~~~g~~l~dS~~I~~yL~~~~~~ 73 (75)
T PF13417_consen 1 LYGFPGSPYSQKVRLALEEKGIPYELVPVDPEE---KRPEFLKLNPKGKVPVLVDDGEVLTDSAAIIEYLEERYPG 73 (75)
T ss_dssp EEEETTSHHHHHHHHHHHHHTEEEEEEEEBTTS---TSHHHHHHSTTSBSSEEEETTEEEESHHHHHHHHHHHSTS
T ss_pred CCCcCCChHHHHHHHHHHHcCCeEEEeccCccc---chhHHHhhcccccceEEEECCEEEeCHHHHHHHHHHHcCC
Confidence 899999999999999999999999999999753 3789999999999999999999999999999999999874
No 29
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=99.80 E-value=4.8e-18 Score=134.53 Aligned_cols=220 Identities=19% Similarity=0.218 Sum_probs=148.1
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHH------
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIER------ 74 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~------ 74 (267)
++||.+-.||||.|||..|.+.||+|++++|++.. ..-.+.+-+.+||+|...|..+.||.+|+.-|+.
T Consensus 91 l~LyQyetCPFCcKVrAFLDyhgisY~VVEVnpV~-----r~eIk~SsykKVPil~~~Geqm~dSsvIIs~laTyLq~~~ 165 (370)
T KOG3029|consen 91 LVLYQYETCPFCCKVRAFLDYHGISYAVVEVNPVL-----RQEIKWSSYKKVPILLIRGEQMVDSSVIISLLATYLQDKR 165 (370)
T ss_pred EEEEeeccCchHHHHHHHHhhcCCceEEEEecchh-----hhhccccccccccEEEeccceechhHHHHHHHHHHhccCC
Confidence 57999999999999999999999999999999863 3334567799999999766679999999887732
Q ss_pred --------hcCCCCC-----------------------CCCCcccHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHH
Q 024495 75 --------ISVVSSG-----------------------ADDMNLSSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKF 123 (267)
Q Consensus 75 --------~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (267)
.+|.... .+.+-..+..-+.|...+|.|.- -...|+.++.+.+..
T Consensus 166 q~l~eiiq~yPa~~~~ne~GK~v~~~~NKyflM~~e~d~~~~ke~~~eerkWR~WvDn~lV----HLiSPNvYrn~~Esl 241 (370)
T KOG3029|consen 166 QDLGEIIQMYPATSFFNEDGKEVNDILNKYFLMYREHDPGVSKETDEEERKWRSWVDNHLV----HLISPNVYRNMGESL 241 (370)
T ss_pred CCHHHHHHhccccccccccccchhhcchhheeeeeccCCCccccchHHHhHHHHHHhhhhh----hhcCcccccChhhHH
Confidence 2331100 01112224466788888877633 334566666655555
Q ss_pred HHHHHHHHhhc----CcchHHHHHHHHH--HHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHcc-CCceeccCCCchhHH
Q 024495 124 IRRVVIARMAE----SPDLASAYHRKLR--EAYEIEDKLKNPEVLKWSKEHLVRLLDEVETKLN-DTAYLAGEEFTMADV 196 (267)
Q Consensus 124 ~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-~~~~l~G~~~t~AD~ 196 (267)
........... .+.+.+.++.-.. +++...+.-...-......+.+.+.++.+-..|+ +++|+.|++|++||+
T Consensus 242 etFewf~q~G~w~~~FpawEr~lavY~GAtAM~lisK~LKkkhni~D~Re~lydA~d~Wvaalgknr~flGG~kPnLaDL 321 (370)
T KOG3029|consen 242 ETFEWFSQAGEWDVHFPAWERDLAVYCGATAMYLISKMLKKKHNISDEREHLYDAADQWVAALGKNRPFLGGKKPNLADL 321 (370)
T ss_pred HHHHHHHHcCCccccCchHHHHHHHHhhHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhCCCCCccCCCCCchhhh
Confidence 44444444333 4444444444333 2333322222222233355667777777777785 789999999999999
Q ss_pred HHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhc
Q 024495 197 MLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQ 230 (267)
Q Consensus 197 ~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 230 (267)
.++++++-+..+....+ .-...++..|+-+|++
T Consensus 322 svfGvl~sm~gc~afkd-~~q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 322 SVFGVLRSMEGCQAFKD-CLQNTSIGEWYYRMEA 354 (370)
T ss_pred hhhhhhhHhhhhhHHHH-HHhcchHHHHHHHHHH
Confidence 99999999888765433 3445789999999975
No 30
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.80 E-value=2.9e-19 Score=118.69 Aligned_cols=73 Identities=30% Similarity=0.528 Sum_probs=69.2
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIE 73 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~ 73 (267)
|+||+++.||+|++++++|+++|++|+.+.+++..++++.++|.+.||.+++|+|+++|.+++||.+|++||+
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~i~es~aI~~yl~ 73 (73)
T cd03056 1 MKLYGFPLSGNCYKVRLLLALLGIPYEWVEVDILKGETRTPEFLALNPNGEVPVLELDGRVLAESNAILVYLA 73 (73)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEecCCCcccCCHHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 7999999999999999999999999999999987777788999999999999999999999999999999984
No 31
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.80 E-value=4.2e-19 Score=117.91 Aligned_cols=73 Identities=26% Similarity=0.488 Sum_probs=67.8
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHHhc
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIERIS 76 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~~~ 76 (267)
|+||+++.||+|++++++|+++|++|+.+.++.. +..+++++.||.|++|+|+++|..++||.+|++||++++
T Consensus 1 ~~ly~~~~~~~~~~v~~~l~~~gi~~~~~~v~~~---~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~~~ 73 (73)
T cd03059 1 MTLYSGPDDVYSHRVRIVLAEKGVSVEIIDVDPD---NPPEDLAELNPYGTVPTLVDRDLVLYESRIIMEYLDERF 73 (73)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCccEEEEcCCC---CCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 7999999999999999999999999999988863 457899999999999999999999999999999998764
No 32
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=99.79 E-value=5.3e-19 Score=117.37 Aligned_cols=73 Identities=25% Similarity=0.512 Sum_probs=68.2
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIE 73 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~ 73 (267)
|+||+++.|+++++++++|+++|++|+.+.++...++++.++|.+.||.++||+|+++|.+|+||.||++||+
T Consensus 1 ~~l~~~~~s~~~~~v~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~~nP~~~vP~L~~~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 1 LTIWGRRSSINVQKVLWLLDELGLPYERIDAGGQFGGLDTPEFLAMNPNGRVPVLEDGDFVLWESNAILRYLA 73 (73)
T ss_pred CEEEecCCCcchHHHHHHHHHcCCCCEEEEeccccccccCHHHHhhCCCCCCCEEEECCEEEECHHHHHHHhC
Confidence 6899999999999999999999999999998876666778899999999999999999999999999999984
No 33
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=99.79 E-value=7.4e-19 Score=116.99 Aligned_cols=73 Identities=26% Similarity=0.313 Sum_probs=67.1
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCC-CcccEEEeCCEEeechHHHHHHHHHhc
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPR-AKLPVLKNGAHIIFNTIEIIQYIERIS 76 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~-~~vP~L~~~~~~l~eS~aI~~yL~~~~ 76 (267)
|+||+++.||+|++++++|+++|++|+.+.+++. ++.++|.+.||. +++|+|++||.+++||.+|++||++.+
T Consensus 1 ~~Ly~~~~sp~~~~v~~~l~~~gl~~~~~~~~~~---~~~~~~~~~~p~~~~vP~l~~~~~~l~eS~aI~~yL~~~~ 74 (74)
T cd03058 1 VKLLGAWASPFVLRVRIALALKGVPYEYVEEDLG---NKSELLLASNPVHKKIPVLLHNGKPICESLIIVEYIDEAW 74 (74)
T ss_pred CEEEECCCCchHHHHHHHHHHcCCCCEEEEeCcc---cCCHHHHHhCCCCCCCCEEEECCEEeehHHHHHHHHHhhC
Confidence 7999999999999999999999999999988874 457889999995 999999999999999999999998764
No 34
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=99.79 E-value=7.7e-19 Score=119.05 Aligned_cols=76 Identities=24% Similarity=0.451 Sum_probs=70.4
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeC---CEEeechHHHHHHHHHhcC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNG---AHIIFNTIEIIQYIERISV 77 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~---~~~l~eS~aI~~yL~~~~~ 77 (267)
|+||+++. |+|++++++|+++||+|+.+.+++..++++.++|.+.||.++||+|+++ |.+|+||.+|++||++.++
T Consensus 2 ~~Ly~~~~-~~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~g~~l~eS~aI~~yL~~~~~ 80 (81)
T cd03048 2 ITLYTHGT-PNGFKVSIMLEELGLPYEIHPVDISKGEQKKPEFLKINPNGRIPAIVDHNGTPLTVFESGAILLYLAEKYD 80 (81)
T ss_pred eEEEeCCC-CChHHHHHHHHHcCCCcEEEEecCcCCcccCHHHHHhCcCCCCCEEEeCCCCceEEEcHHHHHHHHHHHhC
Confidence 58999985 9999999999999999999999987777788999999999999999976 8999999999999998875
No 35
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=99.78 E-value=1.1e-18 Score=117.16 Aligned_cols=76 Identities=24% Similarity=0.433 Sum_probs=70.3
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeC-CEEeechHHHHHHHHHhcC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNG-AHIIFNTIEIIQYIERISV 77 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~-~~~l~eS~aI~~yL~~~~~ 77 (267)
|+||+++.| ++++|+++|.++|++|+.+.++..+++++.++|.+.||.+++|+|+++ |.+++||.+|++||++.+|
T Consensus 1 ~~Ly~~~~~-~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~np~~~vP~l~~~~g~~l~eS~aI~~yL~~~~p 77 (77)
T cd03057 1 MKLYYSPGA-CSLAPHIALEELGLPFELVRVDLRTKTQKGADYLAINPKGQVPALVLDDGEVLTESAAILQYLADLHP 77 (77)
T ss_pred CEEEeCCCC-chHHHHHHHHHcCCCceEEEEecccCccCCHhHHHhCCCCCCCEEEECCCcEEEcHHHHHHHHHHhCc
Confidence 789999976 699999999999999999999998878888999999999999999976 8999999999999998875
No 36
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=99.78 E-value=9.5e-19 Score=116.18 Aligned_cols=73 Identities=30% Similarity=0.525 Sum_probs=69.4
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIE 73 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~ 73 (267)
|+||+++.|++|++++++|+++|++|+.+.+++..++++.+++.+.||.+++|+|+++|.+++||.||++||+
T Consensus 1 ~~L~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~ 73 (73)
T cd03042 1 MILYSYFRSSASYRVRIALNLKGLDYEYVPVNLLKGEQLSPAYRALNPQGLVPTLVIDGLVLTQSLAIIEYLD 73 (73)
T ss_pred CEEecCCCCcchHHHHHHHHHcCCCCeEEEecCccCCcCChHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 7999999999999999999999999999999987777778999999999999999999999999999999985
No 37
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=99.78 E-value=7e-19 Score=117.10 Aligned_cols=73 Identities=32% Similarity=0.602 Sum_probs=68.0
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEE-eCCEEeechHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK-NGAHIIFNTIEIIQYIE 73 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~-~~~~~l~eS~aI~~yL~ 73 (267)
|+||+++.||+|++++++|.++|++|+.+.++...+++..+++.+.||.+++|+|+ +||..++||.+|++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~L~~~~l~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~l~es~aI~~yLe 74 (74)
T cd03051 1 MKLYDSPTAPNPRRVRIFLAEKGIDVPLVTVDLAAGEQRSPEFLAKNPAGTVPVLELDDGTVITESVAICRYLE 74 (74)
T ss_pred CEEEeCCCCcchHHHHHHHHHcCCCceEEEeecccCccCCHHHHhhCCCCCCCEEEeCCCCEEecHHHHHHHhC
Confidence 79999999999999999999999999999999876666778999999999999998 57889999999999985
No 38
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.78 E-value=8.5e-19 Score=117.49 Aligned_cols=74 Identities=22% Similarity=0.367 Sum_probs=65.7
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEe--CCEEeechHHHHHHHHHhc
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKN--GAHIIFNTIEIIQYIERIS 76 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~--~~~~l~eS~aI~~yL~~~~ 76 (267)
|+||+++.||+|+|++++|.++||+|+.+.++ .+++..+++++.||.++||+|++ +|.+++||.+|++||++.+
T Consensus 2 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~v~--~~~~~~~~~~~~~p~~~vP~l~~~~~~~~l~es~~I~~yL~~~~ 77 (77)
T cd03041 2 LELYEFEGSPFCRLVREVLTELELDVILYPCP--KGSPKRDKFLEKGGKVQVPYLVDPNTGVQMFESADIVKYLFKTY 77 (77)
T ss_pred ceEecCCCCchHHHHHHHHHHcCCcEEEEECC--CChHHHHHHHHhCCCCcccEEEeCCCCeEEEcHHHHHHHHHHhC
Confidence 68999999999999999999999999998775 33445678999999999999996 4689999999999999864
No 39
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=99.78 E-value=1.7e-18 Score=115.83 Aligned_cols=76 Identities=26% Similarity=0.437 Sum_probs=70.2
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHHhcC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIERISV 77 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~~~~ 77 (267)
|+||+++. +++++++++|+++|++|+.+.++...++++.++|.+.||.+++|+|+++|.+++||.+|++||++.++
T Consensus 1 ~~l~~~~~-~~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~g~~l~es~aI~~yL~~~~~ 76 (76)
T cd03046 1 ITLYHLPR-SRSFRILWLLEELGLPYELVLYDRGPGEQAPPEYLAINPLGKVPVLVDGDLVLTESAAIILYLAEKYG 76 (76)
T ss_pred CEEEeCCC-CChHHHHHHHHHcCCCcEEEEeCCCCCccCCHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHHHHhCc
Confidence 78999986 58999999999999999999999876677789999999999999999999999999999999998764
No 40
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=99.77 E-value=1.3e-18 Score=116.10 Aligned_cols=74 Identities=28% Similarity=0.528 Sum_probs=67.0
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCC-CcccEEEeC-CEEeechHHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPR-AKLPVLKNG-AHIIFNTIEIIQYIER 74 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~-~~vP~L~~~-~~~l~eS~aI~~yL~~ 74 (267)
|+|++++..+++.++|++|+++|++|+.+.+++..+++++++|.+.||. |+||+|+++ |.+++||.||++||++
T Consensus 1 ~~l~l~~~~~~~~~~r~~l~~~gv~~e~~~v~~~~~~~~~~e~~~~~p~~g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 1 MTLTLYNGRGRSERIRLLLAEKGVEYEDVRVDFEKGEHKSPEFLAINPMFGKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp EEEEEESSSTTTHHHHHHHHHTT--EEEEEEETTTTGGGSHHHHHHTTTSSSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred CEEEEECCCCchHHHHHHHHHhcccCceEEEecccccccchhhhhcccccceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 5677777777999999999999999999999999888888999999999 999999998 9999999999999985
No 41
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.77 E-value=2.2e-18 Score=117.35 Aligned_cols=68 Identities=13% Similarity=0.142 Sum_probs=63.6
Q ss_pred CCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHHhcC
Q 024495 7 PYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIERISV 77 (267)
Q Consensus 7 ~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~~~~ 77 (267)
..||||+++|++|++|||+|+.+.+++.+ ++++|+++||.|+||+|+++|.+|+||.+|++||++.++
T Consensus 20 g~cpf~~rvrl~L~eKgi~ye~~~vd~~~---~p~~~~~~nP~g~vPvL~~~~~~i~eS~~I~eYLde~~~ 87 (91)
T cd03061 20 GNCPFCQRLFMVLWLKGVVFNVTTVDMKR---KPEDLKDLAPGTQPPFLLYNGEVKTDNNKIEEFLEETLC 87 (91)
T ss_pred CCChhHHHHHHHHHHCCCceEEEEeCCCC---CCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHHcc
Confidence 57999999999999999999999999854 478999999999999999999999999999999999875
No 42
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=99.76 E-value=2.4e-18 Score=114.77 Aligned_cols=72 Identities=22% Similarity=0.354 Sum_probs=67.1
Q ss_pred eeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEe-CCEEeechHHHHHHHHH
Q 024495 2 QLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKN-GAHIIFNTIEIIQYIER 74 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~-~~~~l~eS~aI~~yL~~ 74 (267)
+||+++.|++|++++++|+++|++|+.+.++...+ ++.++|+++||.+++|+|++ +|.+++||.||++||++
T Consensus 2 ~Ly~~~~~~~~~~~~~~l~~~gi~~~~~~v~~~~~-~~~~~~~~~nP~~~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 2 TLYTYPGNPRSLKILAAAKYNGLDVEIVDFQPGKE-NKTPEFLKKFPLGKVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred eEecCCCCccHHHHHHHHHHcCCceEEEecccccc-cCCHHHHHhCCCCCCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 79999999999999999999999999999998654 77899999999999999995 58999999999999975
No 43
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=99.76 E-value=1.9e-18 Score=114.55 Aligned_cols=71 Identities=20% Similarity=0.279 Sum_probs=65.1
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIER 74 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~ 74 (267)
|+||+++.|++|+++|++|.++|++|+.+.++.. +..+++...||.+++|+|++||.+++||.||++||++
T Consensus 2 ~~Ly~~~~~~~~~~v~~~L~~~~i~~e~~~v~~~---~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 72 (73)
T cd03076 2 YTLTYFPVRGRAEAIRLLLADQGISWEEERVTYE---EWQESLKPKMLFGQLPCFKDGDLTLVQSNAILRHLGR 72 (73)
T ss_pred cEEEEeCCcchHHHHHHHHHHcCCCCEEEEecHH---HhhhhhhccCCCCCCCEEEECCEEEEcHHHHHHHHhc
Confidence 6899999999999999999999999999999862 3355788999999999999999999999999999975
No 44
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.75 E-value=1.5e-17 Score=123.07 Aligned_cols=207 Identities=15% Similarity=0.207 Sum_probs=135.0
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEE-eCCEEeechHHHHHHHHHhcCCC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK-NGAHIIFNTIEIIQYIERISVVS 79 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~-~~~~~l~eS~aI~~yL~~~~~~~ 79 (267)
|+||-+.+||||.|+|++...+|||++.....-.+. .. =..+-...+||+|+ ++|..+.||.+|..|+++..+..
T Consensus 1 MkLYIYdHCPfcvrarmi~Gl~nipve~~vL~nDDe-~T---p~rmiG~KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~~ 76 (215)
T COG2999 1 MKLYIYDHCPFCVRARMIFGLKNIPVELHVLLNDDE-ET---PIRMIGQKQVPILQKEDGRAMPESLDIVHYVDELDGKP 76 (215)
T ss_pred CceeEeccChHHHHHHHHhhccCCChhhheeccCcc-cC---hhhhhcccccceEEccccccchhhhHHHHHHHHhcCch
Confidence 899999999999999999999999999988775432 11 23456688999999 88999999999999999987643
Q ss_pred CCCCCCcccHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHhhhcCCH
Q 024495 80 SGADDMNLSSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLREAYEIEDKLKNP 159 (267)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (267)
.. +..-+..++.|+..+......+.-..+.......+ ...-++.|+...+... ....+..-
T Consensus 77 ~l---t~~~~pai~~wlrkv~~y~nkll~PR~~k~~l~EF---------------~T~sA~~yf~~KKe~s-~g~F~~~l 137 (215)
T COG2999 77 LL---TGKVRPAIEAWLRKVNGYLNKLLLPRFAKSALPEF---------------ATPSARKYFTDKKEAS-EGSFESLL 137 (215)
T ss_pred hh---ccCcCHHHHHHHHHhcchHhhhhhhhHhhcCCccc---------------cCHHHHHHHHhhhhhc-cccHHHHH
Confidence 22 45667788999987765222111111111100000 0011112222111110 00001111
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHH
Q 024495 160 EVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYK 235 (267)
Q Consensus 160 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~ 235 (267)
........++...++.+++.+.+..=+-| .+|.-|+.+||+++.+-.... +.-..++..|.++|.+...+.
T Consensus 138 ~~t~~~~~~i~~dl~~l~~Li~~~s~~n~-~l~~ddi~vFplLRnlt~v~g----i~wps~v~dy~~~msektqV~ 208 (215)
T COG2999 138 NHTAQYLKRIQADLRALDKLIVGPSAVNG-ELSEDDILVFPLLRNLTLVAG----IQWPSRVADYRDNMSEKTQVN 208 (215)
T ss_pred hchHHHHHHHHHHHHHHHHHhcCcchhcc-ccchhhhhhhHHhccceeccc----CCCcHHHHHHHHHHHHhhCcc
Confidence 22345577888899999999877653444 699999999999998766532 233457999999998866553
No 45
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=99.75 E-value=3.1e-18 Score=113.36 Aligned_cols=72 Identities=18% Similarity=0.283 Sum_probs=64.7
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIER 74 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~ 74 (267)
++||+++.|++|+++|++|+++|++|+.+.++...+ ..+++.+.||.+++|+|+++|.+++||.||++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~~~~~~~--~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 1 YKLTYFNIRGRGEPIRLLLADAGVEYEDVRITYEEW--PELDLKPTLPFGQLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred CEEEEEcCcchHHHHHHHHHHCCCCcEEEEeCHHHh--hhhhhccCCcCCCCCEEEECCEEEEecHHHHHHhhC
Confidence 689999999999999999999999999999887533 234588999999999999999999999999999974
No 46
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=99.74 E-value=8.3e-18 Score=110.93 Aligned_cols=68 Identities=19% Similarity=0.299 Sum_probs=62.9
Q ss_pred eeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEe-CCEEeechHHHHHHH
Q 024495 2 QLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKN-GAHIIFNTIEIIQYI 72 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~-~~~~l~eS~aI~~yL 72 (267)
+||+++.||+|+|++++|+++|++|+.+.+++.. +.+++.+.||.++||+|++ ||..++||.+|++|+
T Consensus 2 ~ly~~~~~p~~~rv~~~L~~~gl~~e~~~v~~~~---~~~~~~~~np~~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 2 ILYSFRRCPYAMRARMALLLAGITVELREVELKN---KPAEMLAASPKGTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred EEEecCCCcHHHHHHHHHHHcCCCcEEEEeCCCC---CCHHHHHHCCCCCCCEEEECCCcEEecHHHHHHhh
Confidence 7999999999999999999999999999999853 3688999999999999997 489999999999996
No 47
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=99.73 E-value=1.5e-17 Score=109.77 Aligned_cols=70 Identities=20% Similarity=0.316 Sum_probs=61.1
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeC-CEEeechHHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNG-AHIIFNTIEIIQYIER 74 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~-~~~l~eS~aI~~yL~~ 74 (267)
|+||+++.||+|+|+|++|.++|++|+.+.++... .....+.+|.++||+|+++ |..++||.+|++||++
T Consensus 1 ~~Ly~~~~~p~~~rvr~~L~~~gl~~~~~~~~~~~----~~~~~~~~~~~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 1 MKLYIYEHCPFCVKARMIAGLKNIPVEQIILQNDD----EATPIRMIGAKQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred CceEecCCCcHhHHHHHHHHHcCCCeEEEECCCCc----hHHHHHhcCCCccCEEEeCCCeEeehHHHHHHHHhC
Confidence 79999999999999999999999999998877532 1234578999999999965 8999999999999974
No 48
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.72 E-value=1.7e-17 Score=110.12 Aligned_cols=70 Identities=33% Similarity=0.468 Sum_probs=64.1
Q ss_pred CeeecCCCChhHHHHHHHHHh--cCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEE-eCCEEeechHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEE--KNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK-NGAHIIFNTIEIIQYIE 73 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~--~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~-~~~~~l~eS~aI~~yL~ 73 (267)
|+||+++.||+|+++|++|.+ +|++|+.+.++. .++.+++++.||.+++|+|+ +||..++||.||++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~l~~~~~~i~~~~~~~~~---~~~~~~~~~~~p~~~vP~l~~~~g~~l~es~aI~~yLe 73 (73)
T cd03049 1 MKLLYSPTSPYVRKVRVAAHETGLGDDVELVLVNP---WSDDESLLAVNPLGKIPALVLDDGEALFDSRVICEYLD 73 (73)
T ss_pred CEEecCCCCcHHHHHHHHHHHhCCCCCcEEEEcCc---ccCChHHHHhCCCCCCCEEEECCCCEEECHHHHHhhhC
Confidence 799999999999999999999 899999998886 34568899999999999998 58899999999999985
No 49
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=99.72 E-value=2.4e-17 Score=111.64 Aligned_cols=75 Identities=19% Similarity=0.173 Sum_probs=64.6
Q ss_pred eeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCc-chhhhh-----hCCCCcccEEEeCCEEeechHHHHHHHHHh
Q 024495 2 QLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNM-DTSFFR-----MNPRAKLPVLKNGAHIIFNTIEIIQYIERI 75 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~-~~~~~~-----~~p~~~vP~L~~~~~~l~eS~aI~~yL~~~ 75 (267)
+|||++.++.|++++++|+++||+|+.+.+++..+++. .+++.. .+|+++||+|++||.+++||.||++||+++
T Consensus 2 ~l~y~~~~~~~~~~~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~~~~~P~g~vP~L~~~g~~l~ES~AIl~YLa~~ 81 (82)
T cd03075 2 TLGYWDIRGLAQPIRLLLEYTGEKYEEKRYELGDAPDYDRSQWLNEKFKLGLDFPNLPYYIDGDVKLTQSNAILRYIARK 81 (82)
T ss_pred EEEEeCCccccHHHHHHHHHcCCCcEEEEeccCCccccchHhhhccchhcCCcCCCCCEEEECCEEEeehHHHHHHHhhc
Confidence 79999999999999999999999999999998766543 344442 239999999999999999999999999875
Q ss_pred c
Q 024495 76 S 76 (267)
Q Consensus 76 ~ 76 (267)
+
T Consensus 82 ~ 82 (82)
T cd03075 82 H 82 (82)
T ss_pred C
Confidence 3
No 50
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=99.72 E-value=1.4e-16 Score=125.76 Aligned_cols=202 Identities=15% Similarity=0.120 Sum_probs=132.9
Q ss_pred CChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHHhcCCCCCCCCCcc
Q 024495 8 YSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIERISVVSSGADDMNL 87 (267)
Q Consensus 8 ~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~~~~~~~~ 87 (267)
.||||.||...|+..+|||+.+.-. ....++.|++|.++-+|..+.||.-|..+|.++++-... ..+.
T Consensus 60 LSPfClKvEt~lR~~~IpYE~~~~~----------~~~rSr~G~lPFIELNGe~iaDS~~I~~~L~~hf~~~~~--L~~e 127 (281)
T KOG4244|consen 60 LSPFCLKVETFLRAYDIPYEIVDCS----------LKRRSRNGTLPFIELNGEHIADSDLIEDRLRKHFKIPDD--LSAE 127 (281)
T ss_pred CChHHHHHHHHHHHhCCCceecccc----------ceeeccCCCcceEEeCCeeccccHHHHHHHHHHcCCCCC--CCHH
Confidence 6899999999999999999986333 224678999999999999999999999999988853331 3577
Q ss_pred cHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcc-hHHHHHHHH-HHHHH-----HhhhcCCHH
Q 024495 88 SSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPD-LASAYHRKL-REAYE-----IEDKLKNPE 160 (267)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~-----~~~~~~~~~ 160 (267)
++++.......++. +.++.+.........+...... ....++ +..-....+ +..+. .-.+.-..-
T Consensus 128 ~~a~s~Al~rm~dn--hL~~~l~y~k~~~~~~~~~~~~------~~~l~~~l~~~l~~~~~~~~f~~kv~~r~~g~IG~f 199 (281)
T KOG4244|consen 128 QRAQSRALSRMADN--HLFWILLYYKGADDAWLNTDRK------LIGLPGFLFPLLLPLFWKAIFGKKVYKRSTGAIGDF 199 (281)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHhhhcchHHHHHHHh------ccCccccchHHHHHHHHHHHHHHHHHHHhhccccCc
Confidence 88888887776663 2223333322222221211111 111110 111111111 11111 001111111
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcc---hh-hcCCCcHHHHHHHHhc
Q 024495 161 VLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLED---EY-ISCRPNIAEYWVLMQQ 230 (267)
Q Consensus 161 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~---~~-~~~~p~l~~w~~~~~~ 230 (267)
..++..+.+.+-|..++..|++++||+|+++|-+|+.+++.|..+.. +... +. ...+|+|..|++|+++
T Consensus 200 ~~~Ei~ell~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v~Y-P~~~~i~d~le~d~p~l~eYceRIr~ 272 (281)
T KOG4244|consen 200 ESAEIDELLHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQVYY-PFRSHISDLLEGDFPNLLEYCERIRK 272 (281)
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhheec-cCCCcHHHHHhhhchHHHHHHHHHHH
Confidence 23346777889999999999999999999999999999999998876 3321 22 3679999999999976
No 51
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=99.70 E-value=7.8e-17 Score=105.76 Aligned_cols=68 Identities=34% Similarity=0.593 Sum_probs=58.1
Q ss_pred CChhHHHHHHHHHhcCCceEEEEeCC-CCCCCcchhhhhhCCCCcccEEEe-CCEEeechHHHHHHHHHh
Q 024495 8 YSLDSQKVRLALEEKNIDYTSYHVNP-ITGKNMDTSFFRMNPRAKLPVLKN-GAHIIFNTIEIIQYIERI 75 (267)
Q Consensus 8 ~s~~~~~vr~~L~~~gi~~~~~~v~~-~~~~~~~~~~~~~~p~~~vP~L~~-~~~~l~eS~aI~~yL~~~ 75 (267)
.|||++|++++|+++|++|+...+.. .++..+.++|.+.||.++||+|++ +|.+++||.+|++||++.
T Consensus 1 ~sP~a~Rv~i~l~~~gl~~~~~~v~~~~~~~~~~~~~~~~~p~~~VP~L~~~~g~vi~eS~~I~~yL~~~ 70 (70)
T PF13409_consen 1 FSPFAHRVRIALEEKGLPYEIKVVPLIPKGEQKPPEFLALNPRGKVPVLVDPDGTVINESLAILEYLEEQ 70 (70)
T ss_dssp T-HHHHHHHHHHHHHTGTCEEEEEETTTTBCTTCHBHHHHSTT-SSSEEEETTTEEEESHHHHHHHHHHT
T ss_pred CchHhHHHHHHHHHhCCCCEEEEEeeecCccccChhhhccCcCeEEEEEEECCCCEeeCHHHHHHHHhcC
Confidence 59999999999999999999988844 344556789999999999999996 789999999999999863
No 52
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=99.70 E-value=5.5e-17 Score=111.77 Aligned_cols=70 Identities=26% Similarity=0.510 Sum_probs=64.0
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeC-CEEeechHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNG-AHIIFNTIEIIQYIE 73 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~-~~~l~eS~aI~~yL~ 73 (267)
|+||+++.||+|++++++|.++|++|+.+.++... ..+++.+.||.+++|+|+++ |.+++||.+|++||+
T Consensus 19 ~~Ly~~~~sp~~~kv~~~L~~~gl~~~~~~v~~~~---~~~~~~~~np~~~vPvL~~~~g~~l~eS~aI~~yLe 89 (89)
T cd03055 19 IRLYSMRFCPYAQRARLVLAAKNIPHEVININLKD---KPDWFLEKNPQGKVPALEIDEGKVVYESLIICEYLD 89 (89)
T ss_pred EEEEeCCCCchHHHHHHHHHHcCCCCeEEEeCCCC---CcHHHHhhCCCCCcCEEEECCCCEEECHHHHHHhhC
Confidence 68999999999999999999999999999988743 35779999999999999976 899999999999985
No 53
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=99.70 E-value=6e-17 Score=110.44 Aligned_cols=70 Identities=23% Similarity=0.327 Sum_probs=61.7
Q ss_pred CCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeC-CEEeechHHHHHHHHHhcC
Q 024495 7 PYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNG-AHIIFNTIEIIQYIERISV 77 (267)
Q Consensus 7 ~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~-~~~l~eS~aI~~yL~~~~~ 77 (267)
+.||+|+|+|++|.++||+|+.+.+++..++...+++ +.||.+++|+|+++ |.+++||.+|++||++.+|
T Consensus 14 ~~Sp~~~kv~~~L~~~~i~~~~~~~~~~~~~~~~~~~-~~~p~~~vP~L~~~~~~~l~eS~aI~~yL~~~~p 84 (84)
T cd03038 14 AFSPNVWKTRLALNHKGLEYKTVPVEFPDIPPILGEL-TSGGFYTVPVIVDGSGEVIGDSFAIAEYLEEAYP 84 (84)
T ss_pred CcCChhHHHHHHHHhCCCCCeEEEecCCCcccccccc-cCCCCceeCeEEECCCCEEeCHHHHHHHHHHhCc
Confidence 6799999999999999999999999876554444455 88999999999988 8999999999999998874
No 54
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=99.68 E-value=1.9e-16 Score=106.50 Aligned_cols=71 Identities=11% Similarity=0.140 Sum_probs=61.5
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhh-----CCCCcccEEEeCCEEeechHHHHHHHHHh
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRM-----NPRAKLPVLKNGAHIIFNTIEIIQYIERI 75 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~-----~p~~~vP~L~~~~~~l~eS~aI~~yL~~~ 75 (267)
.+||+++.|++|++++++|+++|++|+.+.++.. +++.+. .|.++||+|++||.+|+||.||++||+++
T Consensus 2 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~v~~~------~~~~~~~~~~~~~~g~vP~L~~~g~~l~ES~AI~~YL~~~ 75 (79)
T cd03077 2 PVLHYFNGRGRMESIRWLLAAAGVEFEEKFIESA------EDLEKLKKDGSLMFQQVPMVEIDGMKLVQTRAILNYIAGK 75 (79)
T ss_pred CEEEEeCCCChHHHHHHHHHHcCCCcEEEEeccH------HHHHhhccccCCCCCCCCEEEECCEEEeeHHHHHHHHHHH
Confidence 4899999999999999999999999999988762 233333 35899999999999999999999999988
Q ss_pred cC
Q 024495 76 SV 77 (267)
Q Consensus 76 ~~ 77 (267)
++
T Consensus 76 ~~ 77 (79)
T cd03077 76 YN 77 (79)
T ss_pred cC
Confidence 74
No 55
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=99.67 E-value=2.3e-16 Score=105.75 Aligned_cols=71 Identities=23% Similarity=0.351 Sum_probs=61.3
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeC----CEEeechHHHHHHHHHhc
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNG----AHIIFNTIEIIQYIERIS 76 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~----~~~l~eS~aI~~yL~~~~ 76 (267)
|+||+++.||+|++++++|.++||+|+.+.+++.. .++ .+.||.++||+|+++ |.+++||.+|++||++..
T Consensus 2 i~Ly~~~~~p~c~kv~~~L~~~gi~y~~~~~~~~~----~~~-~~~~~~~~vP~l~~~~~~~~~~l~eS~~I~~yL~~~~ 76 (77)
T cd03040 2 ITLYQYKTCPFCCKVRAFLDYHGIPYEVVEVNPVS----RKE-IKWSSYKKVPILRVESGGDGQQLVDSSVIISTLKTYL 76 (77)
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCceEEEECCchh----HHH-HHHhCCCccCEEEECCCCCccEEEcHHHHHHHHHHHc
Confidence 68999999999999999999999999999887532 122 467999999999954 789999999999999864
No 56
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.67 E-value=1.9e-15 Score=114.64 Aligned_cols=210 Identities=12% Similarity=0.162 Sum_probs=154.0
Q ss_pred CCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHHhcCCCCCCCCCc
Q 024495 7 PYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIERISVVSSGADDMN 86 (267)
Q Consensus 7 ~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~~~~~~~ 86 (267)
|....|..|...|+..++||.++.-+ ..+| ++|.|+||.|..|...++|-.+|..+.+.+...+... .+.
T Consensus 32 ~d~ascLAVqtfLrMcnLPf~v~~~~-------Naef--mSP~G~vPllr~g~~~~aef~pIV~fVeak~~~l~s~-lsE 101 (257)
T KOG3027|consen 32 PDNASCLAVQTFLRMCNLPFNVRQRA-------NAEF--MSPGGKVPLLRIGKTLFAEFEPIVDFVEAKGVTLTSW-LSE 101 (257)
T ss_pred ccchhHHHHHHHHHHcCCCceeeecC-------Cccc--cCCCCCCceeeecchhhhhhhHHHHHHHHhccchhhh-hhh
Confidence 33457899999999999999987554 3444 7899999999999999999999999998876544332 567
Q ss_pred ccHHHHHHHHHHhhhcCCcccccc--CCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHhhhcCCHHHHHH
Q 024495 87 LSSREVVQWMHKIQQWDPKFFTLD--RIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLREAYEIEDKLKNPEVLKW 164 (267)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (267)
.+++.++..++.++.. |... ++....+..+..+....++..+..+-.....|..+....-............+.
T Consensus 102 ~qkadmra~vslVen~----~t~aEl~~s~~de~ty~~vT~~R~gs~ypWPLs~i~~f~Krr~~~r~lk~~~W~~~~~Dq 177 (257)
T KOG3027|consen 102 DQKADMRAYVSLVENL----LTTAELYVSWNDEETYDEVTALRYGSVYPWPLSHILPFVKRRKALRELKVYDWDDKTMDQ 177 (257)
T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHHhccHHHHHHHhhhccCCCCCCcHHHHHHHHHHHHHHHHHhhcCcccccHHH
Confidence 7889999988887753 2221 112222233333333344444444444444444444433344455566677888
Q ss_pred HHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcc----hhhcCCCcHHHHHHHHhc
Q 024495 165 SKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLED----EYISCRPNIAEYWVLMQQ 230 (267)
Q Consensus 165 ~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~----~~~~~~p~l~~w~~~~~~ 230 (267)
..+.+.++++.|+..|+.++||.|++||-+|..+|+.+..+....++. +.++.|++|.++.+|+++
T Consensus 178 Vie~vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlytilTt~Lpn~ela~~lkkys~LlefcrrIeq 247 (257)
T KOG3027|consen 178 VIEQVDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLYTILTTRLPNMELANILKKYSNLLEFCRRIEQ 247 (257)
T ss_pred HHHHHHHHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHhhhhcCCcHHHHHHHHHhHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999888876642 235789999999999976
No 57
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.67 E-value=3.7e-16 Score=103.45 Aligned_cols=68 Identities=24% Similarity=0.443 Sum_probs=61.9
Q ss_pred cCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHH
Q 024495 5 HHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIE 73 (267)
Q Consensus 5 ~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~ 73 (267)
+...|++|++++++|+++|++|+.+.+++..+ +..++|.+.||.+++|+|+++|.+++||.+|++||+
T Consensus 6 ~~~~s~~s~~v~~~L~~~gl~~e~~~v~~~~~-~~~~~~~~~nP~g~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 6 NKNYSSWSLRPWLLLKAAGIPFEEILVPLYTP-DTRARILEFSPTGKVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred CCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCc-cccHHHHhhCCCCcCCEEEECCEEEEcHHHHHHHhC
Confidence 56789999999999999999999999988654 356889999999999999999999999999999984
No 58
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=99.66 E-value=3.4e-16 Score=104.30 Aligned_cols=67 Identities=25% Similarity=0.294 Sum_probs=60.1
Q ss_pred CeeecCC-------CChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHH
Q 024495 1 MQLYHHP-------YSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIE 73 (267)
Q Consensus 1 ~~Ly~~~-------~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~ 73 (267)
++||+++ .||+|+|++++|+++|++|+.+.++. .+.||.|++|+|+++|.+++||.+|++||+
T Consensus 2 ~~L~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~~~~----------~~~~p~g~vPvl~~~g~~l~eS~~I~~yL~ 71 (75)
T cd03080 2 ITLYQFPRAFGVPSLSPFCLKVETFLRMAGIPYENKFGGL----------AKRSPKGKLPFIELNGEKIADSELIIDHLE 71 (75)
T ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHCCCCcEEeecCc----------ccCCCCCCCCEEEECCEEEcCHHHHHHHHH
Confidence 4899988 68999999999999999999987764 257999999999999999999999999999
Q ss_pred HhcC
Q 024495 74 RISV 77 (267)
Q Consensus 74 ~~~~ 77 (267)
++++
T Consensus 72 ~~~~ 75 (75)
T cd03080 72 EKYG 75 (75)
T ss_pred HHcC
Confidence 8763
No 59
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=99.62 E-value=2.1e-15 Score=98.75 Aligned_cols=71 Identities=37% Similarity=0.658 Sum_probs=63.6
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIE 73 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~ 73 (267)
|+||+++.||+|++++++|.++|++|+.+.++...+. ..++.+.+|.+++|+|+++|.+++||.+|++||+
T Consensus 1 ~~ly~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~P~l~~~~~~~~es~~I~~yl~ 71 (71)
T cd00570 1 LKLYYFPGSPRSLRVRLALEEKGLPYELVPVDLGEGE--QEEFLALNPLGKVPVLEDGGLVLTESLAILEYLA 71 (71)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEeCCCCCC--CHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 6899999999999999999999999999998875432 2258889999999999999999999999999984
No 60
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.61 E-value=3.5e-15 Score=118.36 Aligned_cols=215 Identities=20% Similarity=0.241 Sum_probs=144.9
Q ss_pred eeecCCCChhHHHHHHHHHhcCCc--eEEEEeCCCCCC---------------------CcchhhhhhCC----CCcccE
Q 024495 2 QLYHHPYSLDSQKVRLALEEKNID--YTSYHVNPITGK---------------------NMDTSFFRMNP----RAKLPV 54 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L~~~gi~--~~~~~v~~~~~~---------------------~~~~~~~~~~p----~~~vP~ 54 (267)
.||.+-.|||++|..++-..||++ .....+.+...+ ...+-|....| .-+|||
T Consensus 53 hLYvslaCPWAHRTLI~R~LkgLE~~Isvsvv~~~m~~~GW~F~~~~~g~t~dpl~g~~~L~~~Y~~adP~YsgRvTVPV 132 (324)
T COG0435 53 HLYVSLACPWAHRTLIFRALKGLEPVISVSVVHPLMDENGWTFDPEFPGATGDPLYGIERLSQLYTRADPDYSGRVTVPV 132 (324)
T ss_pred EEEEEecCchHHHHHHHHHHhcccccceEEEecccccCCCceEcCCCCCCCCCcccchhHHHHHHhhcCCCCCCceeEEE
Confidence 588888999999999999999995 222333322110 01122333334 347999
Q ss_pred EEeCC---EEeechHHHHHHHHHhcCCCCCC--CCC-cccHHHHHHHHHHhhhc-CCccccccCCchhhhhhhHHHHHHH
Q 024495 55 LKNGA---HIIFNTIEIIQYIERISVVSSGA--DDM-NLSSREVVQWMHKIQQW-DPKFFTLDRIPEKYRLYTSKFIRRV 127 (267)
Q Consensus 55 L~~~~---~~l~eS~aI~~yL~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (267)
|-|.. .+-.||..|++.+...+...... +.- ...+.+++.+...+-.. +...+...
T Consensus 133 LwDk~~~tIVnNES~eIirm~N~aFde~~~~~~dlyP~~Lr~eId~~n~~Iy~~vNNGVYk~G----------------- 195 (324)
T COG0435 133 LWDKKTQTIVNNESAEIIRMFNSAFDEFGASAVDLYPEALRTEIDELNKWIYDTVNNGVYKAG----------------- 195 (324)
T ss_pred EEecCCCeeecCCcHHHHHHHHHHHHHHhhhccccCCHHHHHHHHHHHhhhcccccCceeeec-----------------
Confidence 99754 67789999999997555321110 000 33466777766655321 11111110
Q ss_pred HHHHhhcCcchHHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhh
Q 024495 128 VIARMAESPDLASAYHRKLREAYEIEDKLKNPEVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKL 207 (267)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~ 207 (267)
..+.+++-++....+...|+.+|+.|+++.|++||++|-||+-+++.|.++..
T Consensus 196 ---------------------------FA~tq~aYeea~~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~ 248 (324)
T COG0435 196 ---------------------------FATTQEAYEEAVKKLFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDP 248 (324)
T ss_pred ---------------------------ccchHHHHHHHHHHHHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecc
Confidence 12567788888899999999999999999999999999999999999998866
Q ss_pred cCCc-----chhhcCCCcHHHHHHHHhcCchHHHhhhcccccHH-HHHHHHHhhhhHhhhh
Q 024495 208 LDLE-----DEYISCRPNIAEYWVLMQQRPSYKMVIGNYFDGWR-KYKTLLKTWCFVRIRS 262 (267)
Q Consensus 208 ~~~~-----~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 262 (267)
+-.+ ..-+..||+|..|.+++-+.|+|+++.. +.+.| .+-.....++|++|..
T Consensus 249 VYvgHFKCN~~rI~dypnL~~yLr~LYq~pg~~~T~d--f~hIK~hYyrSh~~INPtgIvP 307 (324)
T COG0435 249 VYVGHFKCNLRRIRDYPNLWGYLRDLYQLPGFAETVD--FDHIKLHYYRSHTTINPTGIVP 307 (324)
T ss_pred eEEeeeecccchhhcCchHHHHHHHHhcCcccccccc--hhHhhhhheecccccCCCceec
Confidence 5322 1125679999999999999999998874 33333 3444566677776653
No 61
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=99.58 E-value=8.9e-15 Score=96.64 Aligned_cols=65 Identities=26% Similarity=0.386 Sum_probs=58.5
Q ss_pred CeeecCC-------CChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHH
Q 024495 1 MQLYHHP-------YSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIE 73 (267)
Q Consensus 1 ~~Ly~~~-------~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~ 73 (267)
|+||.++ .||+|++++++|+++||+|+.+.++.. ..||.|++|+|+++|..++||.+|++||+
T Consensus 1 ~~L~~~~~~~~~~s~sp~~~~v~~~L~~~~i~~~~~~~~~~----------~~~p~g~vP~l~~~g~~l~es~~I~~yL~ 70 (72)
T cd03054 1 LELYQWGRAFGLPSLSPECLKVETYLRMAGIPYEVVFSSNP----------WRSPTGKLPFLELNGEKIADSEKIIEYLK 70 (72)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHhCCCceEEEecCCc----------ccCCCcccCEEEECCEEEcCHHHHHHHHh
Confidence 5788877 899999999999999999999988752 17899999999999999999999999998
Q ss_pred Hh
Q 024495 74 RI 75 (267)
Q Consensus 74 ~~ 75 (267)
++
T Consensus 71 ~~ 72 (72)
T cd03054 71 KK 72 (72)
T ss_pred hC
Confidence 63
No 62
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.55 E-value=2e-14 Score=103.94 Aligned_cols=76 Identities=17% Similarity=0.285 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHHHh
Q 024495 162 LKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYKMV 237 (267)
Q Consensus 162 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~ 237 (267)
.+...+.+.+.++.+|++|++++|++|+++|+||+++++.+.++............+|+|.+|+++|.++|+++++
T Consensus 39 ~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~~l~~~~~~~~~~~~~~~~P~L~~w~~r~~~rpa~~~~ 114 (115)
T cd03196 39 EEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADWAIFPFVRQFAHVDPKWFDQSPYPRLRRWLNGFLASPLFSKI 114 (115)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHHHHHHHHHHHHHhhhcccCcccCHHHHHHHHHHHcChHHHhh
Confidence 6677888999999999999999999999999999999998876654321111147899999999999999999875
No 63
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.55 E-value=5.9e-14 Score=101.24 Aligned_cols=77 Identities=29% Similarity=0.459 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHHHhh
Q 024495 159 PEVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYKMVI 238 (267)
Q Consensus 159 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 238 (267)
+...+.....+.+.++.+|+.|++++|++|+++|+|||++++.+.++...+.+ ...+|+|.+|+++|.++|++++++
T Consensus 38 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~~---~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 38 EEVKAAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVLRWAPGVGLD---LSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHHHHHhhcCCC---hhhChHHHHHHHHHHhCHHhHhhC
Confidence 44566777889999999999999899999999999999999999887665443 467999999999999999998853
No 64
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.50 E-value=3e-13 Score=96.13 Aligned_cols=78 Identities=38% Similarity=0.579 Sum_probs=67.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHccCC----------ceeccCCCchhHHHHHHHHHHHhhcCCcchh--hcCCCcHHHH
Q 024495 157 KNPEVLKWSKEHLVRLLDEVETKLNDT----------AYLAGEEFTMADVMLIPVFSRLKLLDLEDEY--ISCRPNIAEY 224 (267)
Q Consensus 157 ~~~~~~~~~~~~~~~~l~~le~~L~~~----------~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~--~~~~p~l~~w 224 (267)
.+.+..+....++.+.|+.+|++|+++ +|++|+++|+|||++++.+.++...+.+... ...+|+|.+|
T Consensus 22 ~~~~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~P~l~~w 101 (111)
T cd03204 22 DNVEYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFLGLSRRYWGNGKRPNLEAY 101 (111)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHcCccccccccccChHHHHH
Confidence 567788899999999999999999765 4999999999999999999998876654221 3679999999
Q ss_pred HHHHhcCchH
Q 024495 225 WVLMQQRPSY 234 (267)
Q Consensus 225 ~~~~~~~p~~ 234 (267)
+++|.+||+|
T Consensus 102 ~~rv~aRpsf 111 (111)
T cd03204 102 FERVLQRESF 111 (111)
T ss_pred HHHHHcCCCC
Confidence 9999999985
No 65
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.50 E-value=1.4e-13 Score=98.27 Aligned_cols=76 Identities=21% Similarity=0.313 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHHHh
Q 024495 160 EVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYKMV 237 (267)
Q Consensus 160 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~ 237 (267)
+..+...+.+.+.++.+|+.|++++|++|+++|+|||++++.+.+....+.+. ...+|+|.+|+++|.+||++++.
T Consensus 31 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~~~--~~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 31 KEAEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLWRLPALGIEL--PKQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHHHHHHcCCCC--cccchHHHHHHHHHHCCHHHHHh
Confidence 44566778899999999999999999999999999999999987665455431 35789999999999999999875
No 66
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.49 E-value=6.4e-14 Score=102.75 Aligned_cols=83 Identities=23% Similarity=0.344 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHccC--CceeccCCCchhHHHHHHHHHHHhhcCCc---chhhcCCCcHHHHHHHHhcCchH
Q 024495 160 EVLKWSKEHLVRLLDEVETKLND--TAYLAGEEFTMADVMLIPVFSRLKLLDLE---DEYISCRPNIAEYWVLMQQRPSY 234 (267)
Q Consensus 160 ~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~AD~~l~~~l~~~~~~~~~---~~~~~~~p~l~~w~~~~~~~p~~ 234 (267)
+..+...+.+.+.++.+|+.|++ ++|++|+++|+||+++++.+.++...+.. ......+|+|.+|+++|.++|++
T Consensus 28 ~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~r~~~~p~v 107 (124)
T cd03184 28 SDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALKLLLGYEFPLDRFPKLKKWMDAMKEDPAV 107 (124)
T ss_pred ccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHHhhccccCCcccChHHHHHHHHhccChHH
Confidence 34456777888899999999975 79999999999999999999877654321 11257899999999999999999
Q ss_pred HHhhhccc
Q 024495 235 KMVIGNYF 242 (267)
Q Consensus 235 ~~~~~~~~ 242 (267)
++++.+..
T Consensus 108 ~~~~~~~~ 115 (124)
T cd03184 108 QAFYTDTE 115 (124)
T ss_pred HHHhCCHH
Confidence 99988643
No 67
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.48 E-value=5.4e-13 Score=95.52 Aligned_cols=75 Identities=25% Similarity=0.460 Sum_probs=63.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchH
Q 024495 157 KNPEVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSY 234 (267)
Q Consensus 157 ~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 234 (267)
..+...+...+.+.+.|+.+|++|++++|++|+++|+||+++++++......+.. ...+|+|.+|+++|.++|++
T Consensus 36 ~~~~~~~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~~~~~~~~~~---~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 36 RDPAAIAASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSAYRWFELPIE---RPPLPHLERWYARLRARPAF 110 (110)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHHHHHHcccc---cccCchHHHHHHHHHhCCCC
Confidence 4456677788899999999999999899999999999999999988544444332 57899999999999999985
No 68
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.48 E-value=2.4e-13 Score=99.22 Aligned_cols=80 Identities=15% Similarity=0.283 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHHHhhh
Q 024495 160 EVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYKMVIG 239 (267)
Q Consensus 160 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~ 239 (267)
...+.....+.+.+..+|++|++++|++|+++|+||+++++.+.++...+.. .+..+|+|.+|++++.++|+++++++
T Consensus 31 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~~~~~--~~~~~P~l~~~~~rv~~~p~vk~~~~ 108 (121)
T cd03209 31 KLKPDYLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQHRIFEPD--CLDAFPNLKDFLERFEALPKISAYMK 108 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHHHHHhCcc--ccccChHHHHHHHHHHHCHHHHHHHh
Confidence 3455667788899999999999889999999999999999999888764332 25789999999999999999999987
Q ss_pred cc
Q 024495 240 NY 241 (267)
Q Consensus 240 ~~ 241 (267)
+.
T Consensus 109 ~~ 110 (121)
T cd03209 109 SD 110 (121)
T ss_pred cc
Confidence 65
No 69
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.48 E-value=1.9e-13 Score=107.50 Aligned_cols=192 Identities=16% Similarity=0.153 Sum_probs=125.4
Q ss_pred eeecCCCChhHHHHHHHHHhcCCc----eEEEEe-CCCC-CCC-------------------------cchhhhhhCC--
Q 024495 2 QLYHHPYSLDSQKVRLALEEKNID----YTSYHV-NPIT-GKN-------------------------MDTSFFRMNP-- 48 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L~~~gi~----~~~~~v-~~~~-~~~-------------------------~~~~~~~~~p-- 48 (267)
.||..-.|||++|+.+++..||++ +..+.. +-.+ |.. ..+-|...+|
T Consensus 39 hLYvslaCPWAhRtLi~r~LKGL~~~i~~s~v~~~~d~~gW~F~~~~~~~nDs~~l~~~~d~~~g~k~l~elY~~~~p~Y 118 (319)
T KOG2903|consen 39 HLYVSLACPWAHRTLIVRALKGLEPAIGVSVVHWHLDDKGWRFLDEHIIINDSERLGVTPDPLNGAKRLRELYYIASPNY 118 (319)
T ss_pred EEEEeccCcHHHHHHHHHHHcCccccceeEEeccccCCCcccCCCcccCCCchhcccCCCcccccchhHHHHHhhcCCCC
Confidence 478888899999999999999994 333322 1111 100 0111112233
Q ss_pred --CCcccEEEeC---CEEeechHHHHHHHHHhcC---------CCCCCCCCcccHHHHHHHHHHhhhcCCccccccCCch
Q 024495 49 --RAKLPVLKNG---AHIIFNTIEIIQYIERISV---------VSSGADDMNLSSREVVQWMHKIQQWDPKFFTLDRIPE 114 (267)
Q Consensus 49 --~~~vP~L~~~---~~~l~eS~aI~~yL~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (267)
.-+||||-|- ..+..||..|++.+...+. .+.+.| +..+++++++.. |+..-........
T Consensus 119 ~grfTVPVLWD~k~ktIVnNES~eIIr~fNs~f~ef~~~~e~~~lDL~P--~~L~~~Ide~N~----wvy~~INNGVYk~ 192 (319)
T KOG2903|consen 119 TGRFTVPVLWDLKTKTIVNNESSEIIRMFNSAFDEFNGIAENPVLDLYP--SSLRAQIDETNS----WVYDKINNGVYKC 192 (319)
T ss_pred CceEEEEEEEccccceeecCchHHHHHHHhhhhhhhhccccCCccccCC--HHHHHHHhhhhc----eecccccCceeee
Confidence 2369999864 4788999999999973332 122211 223455444443 3222111111111
Q ss_pred hhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHccCCc--eeccCCCc
Q 024495 115 KYRLYTSKFIRRVVIARMAESPDLASAYHRKLREAYEIEDKLKNPEVLKWSKEHLVRLLDEVETKLNDTA--YLAGEEFT 192 (267)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~--~l~G~~~t 192 (267)
. ..+.++.-+.....+.+.|+.+|+.|+.+. |++|+++|
T Consensus 193 G---------------------------------------FA~~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LT 233 (319)
T KOG2903|consen 193 G---------------------------------------FAEKQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLT 233 (319)
T ss_pred c---------------------------------------cccccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccc
Confidence 1 114566777788889999999999999776 99999999
Q ss_pred hhHHHHHHHHHHHhhcCCc------chhhcCCCcHHHHHHHHhc-CchHHHhh
Q 024495 193 MADVMLIPVFSRLKLLDLE------DEYISCRPNIAEYWVLMQQ-RPSYKMVI 238 (267)
Q Consensus 193 ~AD~~l~~~l~~~~~~~~~------~~~~~~~p~l~~w~~~~~~-~p~~~~~~ 238 (267)
-||+.+++.+.++..+-.. .....+||+|..|.+++-. .|+++.+.
T Consensus 234 eaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Yp~l~~~lk~iY~~~~~~~~Tt 286 (319)
T KOG2903|consen 234 EADIRLYTTIIRFDEVYVQHFKCNKKTIRDEYPNLHNWLKNIYWNIPGFSSTT 286 (319)
T ss_pred hhheeeeeeEEeehhhhheeeecchhhhhccCcHHHHHHHHHHhhccchhhcc
Confidence 9999999999887665321 1123489999999999987 99998876
No 70
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.48 E-value=3.8e-13 Score=98.85 Aligned_cols=82 Identities=16% Similarity=0.192 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhc----CCcchhhcCCCcHHHHHHHHhcCchHH
Q 024495 160 EVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLL----DLEDEYISCRPNIAEYWVLMQQRPSYK 235 (267)
Q Consensus 160 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~----~~~~~~~~~~p~l~~w~~~~~~~p~~~ 235 (267)
...+...+.+.+.++.+|+.|++++|++|+++|+|||++++.+.++... +.+......+|++.+|+++|+++|+++
T Consensus 31 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~ 110 (126)
T cd03185 31 EEREKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLGWFRAYEEVGGVKLLDEEKTPLLAAWAERFLELEAVK 110 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHcCccccCcccCchHHHHHHHHHhccHHH
Confidence 3445567788899999999999889999999999999999999887543 221001467999999999999999999
Q ss_pred Hhhhcc
Q 024495 236 MVIGNY 241 (267)
Q Consensus 236 ~~~~~~ 241 (267)
+++.+.
T Consensus 111 ~~~~~~ 116 (126)
T cd03185 111 EVLPDR 116 (126)
T ss_pred HhCCCH
Confidence 998764
No 71
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.47 E-value=2.5e-13 Score=101.88 Aligned_cols=84 Identities=25% Similarity=0.327 Sum_probs=69.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcC-----CcchhhcCCCcHHHHHHHHhcC
Q 024495 157 KNPEVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLD-----LEDEYISCRPNIAEYWVLMQQR 231 (267)
Q Consensus 157 ~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~-----~~~~~~~~~p~l~~w~~~~~~~ 231 (267)
..++..+.....+.+.|+.+|+.|++++|++|+++|+||+++++.+.++.... .....+..+|+|.+|+++|.++
T Consensus 30 ~~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~ 109 (142)
T cd03190 30 TTQEAYDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLIRFDAVYVQHFKCNLKRIRDYPNLWNYLRRLYQN 109 (142)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHHHHHHHhhhhcccccchhhhCchHHHHHHHHhcC
Confidence 44556777888999999999999999999999999999999999987764321 1111246899999999999999
Q ss_pred chHHHhhhc
Q 024495 232 PSYKMVIGN 240 (267)
Q Consensus 232 p~~~~~~~~ 240 (267)
|++++++..
T Consensus 110 P~~k~~~~~ 118 (142)
T cd03190 110 PGVAETTNF 118 (142)
T ss_pred chHhhhcCH
Confidence 999998874
No 72
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.46 E-value=3.2e-13 Score=98.03 Aligned_cols=81 Identities=30% Similarity=0.610 Sum_probs=67.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHHH
Q 024495 157 KNPEVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYKM 236 (267)
Q Consensus 157 ~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~ 236 (267)
..+...+.....+.+.++.+|++|++++|++|+++|+|||++++.+.++...+.. ..+..+|+|.+|+++|.++|++++
T Consensus 38 ~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~~~~-~~~~~~p~l~~~~~~~~~~p~~~~ 116 (118)
T cd03187 38 TDEAVVEENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLPYLQYLMATPFA-KLFDSRPHVKAWWEDISARPAWKK 116 (118)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHHHHHHHHHHccch-hhhhcCchHHHHHHHHHhCHHHHh
Confidence 4455666778899999999999999999999999999999999999887653322 225679999999999999999987
Q ss_pred hh
Q 024495 237 VI 238 (267)
Q Consensus 237 ~~ 238 (267)
++
T Consensus 117 ~~ 118 (118)
T cd03187 117 VL 118 (118)
T ss_pred hC
Confidence 53
No 73
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.46 E-value=8.5e-13 Score=96.32 Aligned_cols=75 Identities=21% Similarity=0.378 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHHHHHcc--CCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHHHhhhc
Q 024495 163 KWSKEHLVRLLDEVETKLN--DTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYKMVIGN 240 (267)
Q Consensus 163 ~~~~~~~~~~l~~le~~L~--~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 240 (267)
+...+.+.+.|+.+|++|+ +++|++|+++|+|||++++.+.+....+.+ ...+|+|.+|++++.++|+++++...
T Consensus 43 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~---~~~~p~l~~w~~~~~~~p~~~~~~~~ 119 (121)
T cd03191 43 AWYRHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLVPQVYNARRFGVD---LSPYPTIARINEACLELPAFQAAHPD 119 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHHHHHHHHHHhCCC---cccCcHHHHHHHHHHhChhHHHhCcC
Confidence 3445568899999999997 457999999999999999999877665544 47899999999999999999998653
No 74
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.45 E-value=1.7e-12 Score=94.89 Aligned_cols=84 Identities=25% Similarity=0.420 Sum_probs=70.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHHHh
Q 024495 158 NPEVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYKMV 237 (267)
Q Consensus 158 ~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~ 237 (267)
.+...+...+++.+.|+.+|+.|++++|++|+++|+||+++++.+.+......+......+|++.+|++++.++|+++++
T Consensus 34 ~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~ 113 (123)
T cd03181 34 NKKSVEAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLLGFTYVFDKEWRAKYPNVTRWFNTVVNQPIFKAV 113 (123)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHHHHHHHcCHHHHHhChHHHHHHHHHHcCHHHHHH
Confidence 34556778888999999999999999999999999999999999988754433333356799999999999999999998
Q ss_pred hhcc
Q 024495 238 IGNY 241 (267)
Q Consensus 238 ~~~~ 241 (267)
+.+.
T Consensus 114 ~~~~ 117 (123)
T cd03181 114 FGEV 117 (123)
T ss_pred cCCC
Confidence 7764
No 75
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.45 E-value=6.5e-13 Score=95.65 Aligned_cols=79 Identities=23% Similarity=0.471 Sum_probs=68.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHHHh
Q 024495 158 NPEVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYKMV 237 (267)
Q Consensus 158 ~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~ 237 (267)
.+...+....++.+.++.+|+.|++++|++|+++|+|||++++.+.+....+.+ ....+|++.+|+++|.++|+++++
T Consensus 34 ~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~~~~--~~~~~p~l~~w~~~~~~~p~~~~~ 111 (113)
T cd03178 34 IPYAIERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRRLEWIGID--DLDDFPNVKRWLDRIAARPAVQRG 111 (113)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHHHHhcccc--chhhchHHHHHHHHHhhCHHHHHh
Confidence 345567778889999999999999999999999999999999999988766543 256799999999999999999986
Q ss_pred h
Q 024495 238 I 238 (267)
Q Consensus 238 ~ 238 (267)
+
T Consensus 112 ~ 112 (113)
T cd03178 112 L 112 (113)
T ss_pred c
Confidence 5
No 76
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.45 E-value=1.8e-12 Score=94.28 Aligned_cols=71 Identities=25% Similarity=0.376 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCc
Q 024495 159 PEVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRP 232 (267)
Q Consensus 159 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 232 (267)
+...+....++.+.|+.+|++|++++|++|+++|+||+++++.+.++...+.. ...+|+|.+|+++++++|
T Consensus 49 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~~---~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 49 KVLAGFINPELKKHLDFLEDRLAKKGYFVGDKLTAADIMMSFPLEAALARGPL---LEKYPNIAAYLERIEARP 119 (119)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHccCCCCCCCCCCHHHHHHHHHHHHHHHcCcc---cccCchHHHHHHHHhcCC
Confidence 34455677789999999999999999999999999999999999887665542 678999999999999987
No 77
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.44 E-value=4.1e-13 Score=87.85 Aligned_cols=68 Identities=24% Similarity=0.484 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHH
Q 024495 160 EVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVL 227 (267)
Q Consensus 160 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~ 227 (267)
.+.+...+.+.+.++.+|++|++++|++|++||+||+++++.+.++...+.+....+.+|+|.+|++|
T Consensus 2 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGPDFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTHTCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCcCcCccccCHHHHHHHhC
Confidence 46778889999999999999999999999999999999999999999987655557899999999986
No 78
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.44 E-value=5.3e-13 Score=93.01 Aligned_cols=75 Identities=27% Similarity=0.509 Sum_probs=66.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCc
Q 024495 157 KNPEVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRP 232 (267)
Q Consensus 157 ~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 232 (267)
..++..+.....+.+.|+.+|+.|++++|++|+++|+||+++++.+.++...+.... .+.+|+|.+|+++|.+||
T Consensus 21 ~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~~~-~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 21 KDEEMVEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERLGPDFL-FEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHHTTTTT-HTTSHHHHHHHHHHHTSH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHhCCCcc-cccCHHHHHHHHHHHcCC
Confidence 345577888889999999999999999999999999999999999999998877641 389999999999999997
No 79
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.44 E-value=1.1e-12 Score=95.15 Aligned_cols=76 Identities=26% Similarity=0.387 Sum_probs=66.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchH
Q 024495 157 KNPEVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSY 234 (267)
Q Consensus 157 ~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 234 (267)
..+...+....++.+.|+.+|+.|++++|++|+++|+|||++++.+.++...+.+ +...+|+|.+|++++.++|++
T Consensus 42 ~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aDi~l~~~~~~~~~~~~~--~~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 42 QVPEWGERSKARAADFLAYLDTRLAGSPYVAGDRFTIADITAFVGLDFAKVVKLR--VPEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHhHHHHhcCCC--CccccHHHHHHHHHHHhccCC
Confidence 4566778888899999999999999889999999999999999999988776654 246799999999999999974
No 80
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.42 E-value=1.7e-12 Score=94.29 Aligned_cols=76 Identities=30% Similarity=0.479 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhh-cCCcchhhcCCCcHHHHHHHHhcCchHHHhhhc
Q 024495 162 LKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKL-LDLEDEYISCRPNIAEYWVLMQQRPSYKMVIGN 240 (267)
Q Consensus 162 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~-~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 240 (267)
.+.....+.+.|+.+|+.|++++|++|+++|+||+++++.+.++.. .+.+ ...+|+|.+|+++|.++|++++...+
T Consensus 36 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~~~~~~~~~---~~~~p~l~~w~~~~~~~p~~~~~~~~ 112 (118)
T cd03177 36 PEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVSTLEALLPLD---LSKYPNVRAWLERLKALPPYEEANGK 112 (118)
T ss_pred CHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHHHHHhcCCC---hhhCchHHHHHHHHHcccchHHHHHH
Confidence 4556778899999999999988999999999999999999998875 4433 46799999999999999999986643
No 81
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.42 E-value=2.1e-12 Score=96.18 Aligned_cols=78 Identities=18% Similarity=0.239 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHHHHcc--CCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHHHhhhcc
Q 024495 164 WSKEHLVRLLDEVETKLN--DTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYKMVIGNY 241 (267)
Q Consensus 164 ~~~~~~~~~l~~le~~L~--~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~ 241 (267)
.....+.+.|+.||+.|+ +++|++|+++|+||+++++.+.++...... .+..+|+|.+|+++|.++|+++++++..
T Consensus 39 ~~~~~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~~~~--~l~~~P~l~~~~~rv~~~P~vk~~~~~~ 116 (137)
T cd03208 39 IKEKAKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMVEELDPS--LLSDFPLLQAFKTRISNLPTIKKFLQPG 116 (137)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHhchh--hhccChHHHHHHHHHHcCHHHHHHHhcC
Confidence 334466889999999998 778999999999999999999988654332 2678999999999999999999999875
Q ss_pred cc
Q 024495 242 FD 243 (267)
Q Consensus 242 ~~ 243 (267)
..
T Consensus 117 ~~ 118 (137)
T cd03208 117 SP 118 (137)
T ss_pred CC
Confidence 53
No 82
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.40 E-value=1.2e-12 Score=95.23 Aligned_cols=79 Identities=16% Similarity=0.285 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHHHccC-CceeccCCCchhHHHHHHHHHHHhhc-CC--cchhhcCCCcHHHHHHHHhcCchHHHhh
Q 024495 163 KWSKEHLVRLLDEVETKLND-TAYLAGEEFTMADVMLIPVFSRLKLL-DL--EDEYISCRPNIAEYWVLMQQRPSYKMVI 238 (267)
Q Consensus 163 ~~~~~~~~~~l~~le~~L~~-~~~l~G~~~t~AD~~l~~~l~~~~~~-~~--~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 238 (267)
+...+.+.+.|+.+|..|++ ++|++||++|+||+++++.+.++... +. +......+|+|.+|+++|.+||+|++.+
T Consensus 29 ~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~~w~~rl~~rps~~~t~ 108 (121)
T cd03201 29 DGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVPESLTSVKSYMKALFSRESFVKTK 108 (121)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHCCchhhhcC
Confidence 44566788899999999984 79999999999999999988776542 11 1111378999999999999999999987
Q ss_pred hcc
Q 024495 239 GNY 241 (267)
Q Consensus 239 ~~~ 241 (267)
...
T Consensus 109 ~~~ 111 (121)
T cd03201 109 AEK 111 (121)
T ss_pred CCH
Confidence 653
No 83
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.38 E-value=2e-12 Score=94.79 Aligned_cols=82 Identities=23% Similarity=0.375 Sum_probs=69.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHccC----------------CceeccCCCchhHHHHHHHHHHHhhc-----CCcchhh
Q 024495 157 KNPEVLKWSKEHLVRLLDEVETKLND----------------TAYLAGEEFTMADVMLIPVFSRLKLL-----DLEDEYI 215 (267)
Q Consensus 157 ~~~~~~~~~~~~~~~~l~~le~~L~~----------------~~~l~G~~~t~AD~~l~~~l~~~~~~-----~~~~~~~ 215 (267)
..++..+...+.+.+.|+.+|++|++ ++|++|+++|+|||.+++.+.++... +.. ..
T Consensus 22 ~~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~~~~g~~--i~ 99 (134)
T cd03198 22 SNPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFE--IP 99 (134)
T ss_pred CChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC--cc
Confidence 44567788888999999999999986 68999999999999999999877543 222 24
Q ss_pred cCCCcHHHHHHHHhcCchHHHhhhc
Q 024495 216 SCRPNIAEYWVLMQQRPSYKMVIGN 240 (267)
Q Consensus 216 ~~~p~l~~w~~~~~~~p~~~~~~~~ 240 (267)
..+|+|.+|+++|.+||++++.+..
T Consensus 100 ~~~P~L~aw~~ri~aRPsfk~t~~~ 124 (134)
T cd03198 100 ADLTGLWRYLKNAYQREEFTNTCPA 124 (134)
T ss_pred ccCHHHHHHHHHHHCCHHHHHHcCC
Confidence 7799999999999999999998764
No 84
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.37 E-value=8.1e-12 Score=91.81 Aligned_cols=79 Identities=16% Similarity=0.225 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcc---CCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHHHh
Q 024495 161 VLKWSKEHLVRLLDEVETKLN---DTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYKMV 237 (267)
Q Consensus 161 ~~~~~~~~~~~~l~~le~~L~---~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~ 237 (267)
..+.....+.+.|..+|+.|+ +++|++|+++|+||+++++.+.++...... ....+|+|.+|+++|.++|+++++
T Consensus 32 ~~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~~~~--~~~~~P~l~~~~~rv~~~p~v~~~ 109 (126)
T cd03210 32 GKDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVLAPG--CLDAFPLLKAFVERLSARPKLKAY 109 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHhChH--hhhcChHHHHHHHHHHhCcHHHHH
Confidence 345566678899999999997 358999999999999999999888654322 267899999999999999999999
Q ss_pred hhcc
Q 024495 238 IGNY 241 (267)
Q Consensus 238 ~~~~ 241 (267)
+...
T Consensus 110 ~~~~ 113 (126)
T cd03210 110 LESD 113 (126)
T ss_pred HhCc
Confidence 8764
No 85
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.36 E-value=2.6e-12 Score=90.99 Aligned_cols=75 Identities=24% Similarity=0.326 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHHHhhhc
Q 024495 162 LKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYKMVIGN 240 (267)
Q Consensus 162 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 240 (267)
.+....++.+.++.+|++|++++|++|+++|+|||++++.+.+....+. ...+|+|.+|+++++++|+++++.+.
T Consensus 28 ~~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~~~----~~~~p~l~~w~~~~~~~p~~~~~~~~ 102 (103)
T cd03207 28 RMAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQFGL----LPERPAFDAYIARITDRPAFQRAAAI 102 (103)
T ss_pred hhhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHcCC----CCCChHHHHHHHHHHcCHHHHHHhcc
Confidence 4556678999999999999999999999999999999999988775532 46799999999999999999998764
No 86
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.35 E-value=5.4e-12 Score=87.97 Aligned_cols=59 Identities=19% Similarity=0.330 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcC
Q 024495 167 EHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQR 231 (267)
Q Consensus 167 ~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~ 231 (267)
..+.+.++.+|++|++++|++|+++|+|||++++.+.+. +.. ...+|+|.+|+++|.++
T Consensus 38 ~~~~~~l~~le~~L~~~~fl~Gd~~tiADi~l~~~l~~~---~~~---~~~~p~l~~w~~r~~~~ 96 (96)
T cd03200 38 KEKAAVLRALNSALGRSPWLVGSEFTVADIVSWCALLQT---GLA---SAAPANVQRWLKSCENL 96 (96)
T ss_pred HHHHHHHHHHHHHHcCCCccCCCCCCHHHHHHHHHHHHc---ccc---cccChHHHHHHHHHHhC
Confidence 345567888999999999999999999999999988653 222 36789999999999763
No 87
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.33 E-value=9.1e-12 Score=91.51 Aligned_cols=81 Identities=25% Similarity=0.402 Sum_probs=68.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHH-ccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhc--Cch
Q 024495 157 KNPEVLKWSKEHLVRLLDEVETK-LNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQ--RPS 233 (267)
Q Consensus 157 ~~~~~~~~~~~~~~~~l~~le~~-L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~--~p~ 233 (267)
..++..+...+.+.+.++.+|++ +++++|++|+++|+|||++++.+.+....+.+ ....+|+|.+|+++|.+ ||+
T Consensus 38 ~~~~~~~~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~~--~~~~~p~l~~w~~~~~~~~~p~ 115 (126)
T cd03183 38 VSPEKVKKAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAVCEIMQPEAAGYD--VFEGRPKLAAWRKRVKEAGNPL 115 (126)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHhcCCc--ccccCchHHHHHHHHHHhcchh
Confidence 34566777888999999999998 56678999999999999999998887766553 25789999999999999 999
Q ss_pred HHHhhh
Q 024495 234 YKMVIG 239 (267)
Q Consensus 234 ~~~~~~ 239 (267)
+++...
T Consensus 116 ~~~~~~ 121 (126)
T cd03183 116 FDEAHK 121 (126)
T ss_pred HHHHHH
Confidence 998764
No 88
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.30 E-value=1.1e-11 Score=89.33 Aligned_cols=74 Identities=24% Similarity=0.272 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcc-CCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHHHhhh
Q 024495 161 VLKWSKEHLVRLLDEVETKLN-DTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYKMVIG 239 (267)
Q Consensus 161 ~~~~~~~~~~~~l~~le~~L~-~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~ 239 (267)
..+...+.+.+.+..+|..|+ +++|++| ++|+||+++++++.+....+.+ +. |++.+|.++|.+||++++.++
T Consensus 39 ~~~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l~~~~~~~~~~g~~---l~--p~l~ay~~r~~~rPa~~~~~~ 112 (114)
T cd03195 39 LSEAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTDLALMLNRLVLNGDP---VP--ERLRDYARRQWQRPSVQAWLA 112 (114)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHHHHHHHHHHHcCCC---CC--HHHHHHHHHHHCCHHHHHHHh
Confidence 345556677888888999995 6589999 5999999999999999998876 43 899999999999999999875
Q ss_pred c
Q 024495 240 N 240 (267)
Q Consensus 240 ~ 240 (267)
.
T Consensus 113 ~ 113 (114)
T cd03195 113 L 113 (114)
T ss_pred c
Confidence 3
No 89
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.30 E-value=1e-11 Score=87.39 Aligned_cols=71 Identities=23% Similarity=0.314 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchH
Q 024495 161 VLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSY 234 (267)
Q Consensus 161 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 234 (267)
..+...+++.+.++.+|+.|++++|++|+++|+||+++++.+.+....+.. ...+|+|.+|+++|.++|++
T Consensus 30 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~~---~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 30 DKETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALAPEGGVD---LEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHHhccCCC---hhhCcHHHHHHHHHHhCcCC
Confidence 345667889999999999999999999999999999999998765443332 57899999999999999975
No 90
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.30 E-value=9e-12 Score=81.50 Aligned_cols=60 Identities=22% Similarity=0.347 Sum_probs=49.7
Q ss_pred CCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHH
Q 024495 6 HPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIER 74 (267)
Q Consensus 6 ~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~ 74 (267)
++.+++|.|++++|++.|+||+.+. ...+ . ..+|.|+||+|++||.+|+||.+|+.||++
T Consensus 14 ~~~~~~~~kv~~~L~elglpye~~~--~~~~-----~--~~~P~GkVP~L~~dg~vI~eS~aIl~yL~~ 73 (74)
T cd03079 14 LPDNASCLAVQTFLKMCNLPFNVRC--RANA-----E--FMSPSGKVPFIRVGNQIVSEFGPIVQFVEA 73 (74)
T ss_pred cCCCCCHHHHHHHHHHcCCCcEEEe--cCCc-----c--ccCCCCcccEEEECCEEEeCHHHHHHHHhc
Confidence 3467899999999999999999873 2211 1 156789999999999999999999999975
No 91
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.29 E-value=3.9e-11 Score=87.36 Aligned_cols=69 Identities=23% Similarity=0.521 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHcc---CCceeccCCCchhHHHHHHHHHHHhh-----cCCcchhhcCCCcHHHHHHHHhcCchHHHhhhc
Q 024495 169 LVRLLDEVETKLN---DTAYLAGEEFTMADVMLIPVFSRLKL-----LDLEDEYISCRPNIAEYWVLMQQRPSYKMVIGN 240 (267)
Q Consensus 169 ~~~~l~~le~~L~---~~~~l~G~~~t~AD~~l~~~l~~~~~-----~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 240 (267)
+.+.++.+|+.|+ +++|++| ++|+|||++++.+.++.. .+.+ ....+|+|.+|+++|.++|+++++..+
T Consensus 35 ~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~~~~~~~~~~~~~--~~~~~P~l~~W~~~~~~rp~~~~~~~~ 111 (120)
T cd03203 35 AAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIERFQIFLSELFNYD--ITEGRPNLAAWIEEMNKIEAYTQTKQD 111 (120)
T ss_pred HHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHHHHHHHHHhcCcc--ccccCcHHHHHHHHHhcchHHHhHcCC
Confidence 3556777777775 5799999 999999999999976643 3333 236899999999999999999998775
No 92
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.28 E-value=2.3e-11 Score=86.31 Aligned_cols=70 Identities=21% Similarity=0.333 Sum_probs=60.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHh
Q 024495 157 KNPEVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQ 229 (267)
Q Consensus 157 ~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~ 229 (267)
..++..+....++.+.++.+|+.|++++|++|+++|+||+++++.+.++...+.+ ...+|+|.+|+++++
T Consensus 36 ~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~~~~~~~~~~---~~~~p~l~~~~~~~~ 105 (105)
T cd03179 36 ADAEVLAFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYTHVADEGGFD---LADYPAIRAWLARIE 105 (105)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHHHhccccCCC---hHhCccHHHHHHhhC
Confidence 4456777888899999999999999889999999999999999999988765554 577999999999874
No 93
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.24 E-value=4.5e-11 Score=86.15 Aligned_cols=73 Identities=19% Similarity=0.412 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHHHhhh
Q 024495 161 VLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYKMVIG 239 (267)
Q Consensus 161 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~ 239 (267)
.......++...++.+.+.+++++|++|+ +|+||+++++++.+....+.+ . .|+|.+|+++|.++|+++++++
T Consensus 41 ~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~~~~~---~--~P~l~~~~~rv~~rPsv~~~~~ 113 (114)
T cd03194 41 AVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRTYGLP---L--SPAAQAYVDALLAHPAMQEWIA 113 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHHcCCC---C--CHHHHHHHHHHHCCHHHHHHHh
Confidence 33344444444554444445677899999 999999999999988765543 2 2999999999999999999875
No 94
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.23 E-value=1.2e-09 Score=88.96 Aligned_cols=210 Identities=12% Similarity=0.132 Sum_probs=134.6
Q ss_pred CChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEE-eCCEEeechHHHHHHHHHhcCCCCC-CCCC
Q 024495 8 YSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK-NGAHIIFNTIEIIQYIERISVVSSG-ADDM 85 (267)
Q Consensus 8 ~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~-~~~~~l~eS~aI~~yL~~~~~~~~~-~~~~ 85 (267)
.++-|..+.+++...+-|.++.... .++ .+|.|++|+|+ ++|..++.-.-|..+|.+....... .+..
T Consensus 16 id~~sL~~l~y~kl~~~~l~v~~ss-------N~~---~s~sg~LP~l~~~ng~~va~~~~iv~~L~k~~~ky~~d~dl~ 85 (313)
T KOG3028|consen 16 IDPDSLAALIYLKLAGAPLKVVVSS-------NPW---RSPSGKLPYLITDNGTKVAGPVKIVQFLKKNTKKYNLDADLS 85 (313)
T ss_pred cChhHHHHHHHHHHhCCCceeEeec-------CCC---CCCCCCCCeEEecCCceeccHHHHHHHHHHhcccCCcCccHH
Confidence 4578999999999999666654443 222 47899999999 5569999999999999874322222 2234
Q ss_pred cccHHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchH--HHHHHHHHHHHHHhhhcCCHHHHH
Q 024495 86 NLSSREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLA--SAYHRKLREAYEIEDKLKNPEVLK 163 (267)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 163 (267)
..+.++...|++++.++....+......+ ...+....+..+...+.-+-.+. ..+..+.+...... .+...+...
T Consensus 86 ~kq~a~~~a~~sll~~~l~~a~~~t~~v~--~~Ny~e~Tkk~yak~l~fP~n~~~p~~l~~qAk~rl~l~-~g~~~~~e~ 162 (313)
T KOG3028|consen 86 AKQLADTLAFMSLLEENLEPALLYTFWVD--TENYNEVTKKWYAKALPFPLNYILPGKLQRQAKERLQLT-LGELTERED 162 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccchhhHhHHHHHhcCCCchhhcchhhhHHHHHHHHHHH-hCCchhhHH
Confidence 67788899999988775433222211111 11222222333332222111110 11111111111111 123334566
Q ss_pred HHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcc----hhhcCCCcHHHHHHHHhc
Q 024495 164 WSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLED----EYISCRPNIAEYWVLMQQ 230 (267)
Q Consensus 164 ~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~----~~~~~~p~l~~w~~~~~~ 230 (267)
.......+++..+.+.|+.+.|++||+||--|+.++..+..+....... ..+..++||.++.+++.+
T Consensus 163 ~i~~~Aska~~~LS~~Lgs~kffFgd~psslDa~lfs~la~~~~~~Lp~~~Lq~~l~~~~NL~~~~~~i~s 233 (313)
T KOG3028|consen 163 QIYKDASKALNLLSTLLGSKKFFFGDKPSSLDALLFSYLAILLQVALPNDSLQVHLLAHKNLVRYVERIRS 233 (313)
T ss_pred HHHHHHHHHHHHHHHHhcCceEeeCCCCchHHHHHHHHHHHHHhccCCchhHHHHHHhcchHHHHHHHHHH
Confidence 7788889999999999999999999999999999999999966665432 234569999999999865
No 95
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=99.21 E-value=2.9e-10 Score=84.23 Aligned_cols=136 Identities=18% Similarity=0.257 Sum_probs=85.5
Q ss_pred HHHHHHHHHHhhhcCCccccccCCchhhhhhhHHHHHHHHHHHhhcCcchHHHHHHHHHH--HHHHhhhcCCHHHH-HHH
Q 024495 89 SREVVQWMHKIQQWDPKFFTLDRIPEKYRLYTSKFIRRVVIARMAESPDLASAYHRKLRE--AYEIEDKLKNPEVL-KWS 165 (267)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~ 165 (267)
.....+|...+++. |.....++.++.+.+.+...-++......+...+.......+ ++...+.-...... +.-
T Consensus 5 ~~~e~kWr~W~d~~----lv~~~~pniyrt~~ea~~~f~yi~~~~~f~~~er~~~~~~Ga~aM~~isk~lkk~~~i~~D~ 80 (149)
T cd03197 5 DPEEMKWRKWADDH----LVHLISPNIYRTWSEALASFDYITPSGYFGYWEKFFAKYVGAAAMYLISKYLKKPRLLQDDV 80 (149)
T ss_pred hHHHHHHHHHHHhh----hHhhccHHHhCCHHHHHHhhhhHhcCCCccHHHHHHHHHhhHHHHHHHHHHhccccCCCchH
Confidence 34566777777664 444566777777777666655555544444444444444442 23222222222222 223
Q ss_pred HHHHHHHHHHHHHHcc-CCceeccCCCchhHHHHHHHHHHHhhc-CCcchhhcCCCcHHHHHHHHhc
Q 024495 166 KEHLVRLLDEVETKLN-DTAYLAGEEFTMADVMLIPVFSRLKLL-DLEDEYISCRPNIAEYWVLMQQ 230 (267)
Q Consensus 166 ~~~~~~~l~~le~~L~-~~~~l~G~~~t~AD~~l~~~l~~~~~~-~~~~~~~~~~p~l~~w~~~~~~ 230 (267)
.+.+...++.+-+.+. +++|++|++||+||+++++++..+... +... +.++|++.+|+++|.+
T Consensus 81 r~~L~~a~~~w~~~~~~~~~FlaGd~ptIADisvyg~l~s~e~~~~~~D--l~~~p~I~~W~eRm~~ 145 (149)
T cd03197 81 REWLYDALNTWVAALGKDRQFHGGSKPNLADLAVYGVLRSVEGHPAFKD--MVEETKIGEWYERMDA 145 (149)
T ss_pred HHHHHHHHHHHHHHhcCCCCccCCCCCCHHHHHHHHHHHHHHHhccccc--hhhCcCHHHHHHHHHH
Confidence 4445555555555554 568999999999999999999998877 3311 6789999999999976
No 96
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.21 E-value=1.8e-10 Score=84.37 Aligned_cols=68 Identities=10% Similarity=0.198 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhc-CCcchhhcCCCcHHHHHHHHhc
Q 024495 161 VLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLL-DLEDEYISCRPNIAEYWVLMQQ 230 (267)
Q Consensus 161 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~-~~~~~~~~~~p~l~~w~~~~~~ 230 (267)
..+...+.+.+.|+.+|++|++++|++|+++|+||+++++.+.+.... +.+ ....+|+|.+|+++|.+
T Consensus 55 ~~~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~~~~~--~~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 55 GREAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIVSPFP--LLEEDDPVYDWFERCLD 123 (124)
T ss_pred chHHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHcCccc--ccccCChHHHHHHHHhc
Confidence 356778889999999999999999999999999999999999988765 333 25789999999999976
No 97
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.16 E-value=7.5e-11 Score=83.55 Aligned_cols=69 Identities=23% Similarity=0.380 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccC--CceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHH
Q 024495 159 PEVLKWSKEHLVRLLDEVETKLND--TAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLM 228 (267)
Q Consensus 159 ~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~ 228 (267)
+...+...+.+.+.++.+|+.|++ ++|++|+++|+||+++++.+.++...+... ....+|+|.+|++++
T Consensus 34 ~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~-~~~~~p~l~~~~~~~ 104 (104)
T cd03192 34 EKKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLDYLLYLDPKL-LLKKYPKLKALRERV 104 (104)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHHHHHhhCchh-hHHhChhHHHHHHhC
Confidence 455667788899999999999987 899999999999999999999987665421 257799999999875
No 98
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.13 E-value=2.7e-10 Score=78.15 Aligned_cols=68 Identities=16% Similarity=0.207 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcc----hhhcCCCcHHHHHHHHh
Q 024495 162 LKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLED----EYISCRPNIAEYWVLMQ 229 (267)
Q Consensus 162 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~----~~~~~~p~l~~w~~~~~ 229 (267)
.....+++.+.++.+|+.|++++|++|+++|+|||++++.+.++...+... .....+|+|.+|+++|.
T Consensus 17 ~~~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 17 TREIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHhC
Confidence 346677889999999999999999999999999999999998877543221 12467999999999874
No 99
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=99.08 E-value=4.5e-10 Score=75.34 Aligned_cols=70 Identities=17% Similarity=0.244 Sum_probs=60.2
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIE 73 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~ 73 (267)
++||+.+.||+|.+++.+|...||+|+.+.++-. ....++...++..++|++..||..+.++.+|.+||+
T Consensus 10 V~ly~~~~Cp~C~~ak~~L~~~gi~y~~idi~~~---~~~~~~~~~~g~~~vP~i~i~g~~igG~~~l~~~l~ 79 (79)
T TIGR02190 10 VVVFTKPGCPFCAKAKATLKEKGYDFEEIPLGND---ARGRSLRAVTGATTVPQVFIGGKLIGGSDELEAYLA 79 (79)
T ss_pred EEEEECCCCHhHHHHHHHHHHcCCCcEEEECCCC---hHHHHHHHHHCCCCcCeEEECCEEEcCHHHHHHHhC
Confidence 4799999999999999999999999999877642 223456667788999999999999999999999984
No 100
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.08 E-value=5.4e-10 Score=78.14 Aligned_cols=71 Identities=31% Similarity=0.520 Sum_probs=60.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHH
Q 024495 158 NPEVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLM 228 (267)
Q Consensus 158 ~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~ 228 (267)
.++..+...+.+.+.++.+|+.|++++|++|+++|+||+++++.+.++............+|+|.+|+++|
T Consensus 30 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~ 100 (100)
T cd00299 30 DEAALEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLGPLLGLLDEYPRLAAWYDRL 100 (100)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhhhhhhhhccCccHHHHHHhC
Confidence 45667778888999999999999999999999999999999999999887765422357899999999875
No 101
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.05 E-value=3.9e-10 Score=79.17 Aligned_cols=67 Identities=21% Similarity=0.404 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCc--eeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhc
Q 024495 160 EVLKWSKEHLVRLLDEVETKLNDTA--YLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQ 230 (267)
Q Consensus 160 ~~~~~~~~~~~~~l~~le~~L~~~~--~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 230 (267)
...+...+.+.+.+..++++|+++. |++|++||+||+++++.+..+... .. .+.+|+|.+|++||++
T Consensus 31 ~~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~~--~~--~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 31 ASGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRWA--DF--PKDYPNLVRWYERIEE 99 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHCC--HH--TTTCHHHHHHHHHHHT
T ss_pred hhHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhhc--cc--ccccHHHHHHHHhhcC
Confidence 3556777888999999999998666 999999999999999999777633 21 1589999999999974
No 102
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=99.02 E-value=1.5e-09 Score=71.36 Aligned_cols=65 Identities=22% Similarity=0.211 Sum_probs=53.3
Q ss_pred CeeecCC-------CChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHH
Q 024495 1 MQLYHHP-------YSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIE 73 (267)
Q Consensus 1 ~~Ly~~~-------~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~ 73 (267)
|+||.|+ .||+|.++.++|+..|++|+.+...- + ..+|.|++|+|+++|..+.||..|++||.
T Consensus 1 ~~L~~~~~~~g~ps~sp~clk~~~~Lr~~~~~~~v~~~~n-------~---~~sp~gkLP~l~~~~~~i~d~~~Ii~~L~ 70 (73)
T cd03078 1 MELHVWGGDWGLPSVDPECLAVLAYLKFAGAPLKVVPSNN-------P---WRSPTGKLPALLTSGTKISGPEKIIEYLR 70 (73)
T ss_pred CEEEEECCCCCCCcCCHHHHHHHHHHHcCCCCEEEEecCC-------C---CCCCCCccCEEEECCEEecChHHHHHHHH
Confidence 4666444 46999999999999999998864331 1 25689999999999999999999999997
Q ss_pred Hh
Q 024495 74 RI 75 (267)
Q Consensus 74 ~~ 75 (267)
+.
T Consensus 71 ~~ 72 (73)
T cd03078 71 KQ 72 (73)
T ss_pred Hc
Confidence 64
No 103
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.01 E-value=2.1e-09 Score=78.72 Aligned_cols=71 Identities=14% Similarity=0.203 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCc----chhhcCCCcHHHHHHHHh
Q 024495 159 PEVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLE----DEYISCRPNIAEYWVLMQ 229 (267)
Q Consensus 159 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~----~~~~~~~p~l~~w~~~~~ 229 (267)
....++..+.+.+.++.|+..|++++||+|++||.||+++++.+..+...... ....+.+|+|.+|++||+
T Consensus 52 r~~~ee~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 52 DKTLDQVIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEKVKKYSNLLAFCRRIE 126 (126)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHhcC
Confidence 34567788889999999999999999999999999999999999887654221 123678999999999984
No 104
>PRK10638 glutaredoxin 3; Provisional
Probab=98.98 E-value=2e-09 Score=72.97 Aligned_cols=71 Identities=10% Similarity=0.161 Sum_probs=61.1
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIE 73 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~ 73 (267)
+++|..+.||+|++++.+|.++||+|+.+.++.. .....++.+.+|..++|++..||..+.....+..+-.
T Consensus 4 v~ly~~~~Cp~C~~a~~~L~~~gi~y~~~dv~~~--~~~~~~l~~~~g~~~vP~i~~~g~~igG~~~~~~~~~ 74 (83)
T PRK10638 4 VEIYTKATCPFCHRAKALLNSKGVSFQEIPIDGD--AAKREEMIKRSGRTTVPQIFIDAQHIGGCDDLYALDA 74 (83)
T ss_pred EEEEECCCChhHHHHHHHHHHcCCCcEEEECCCC--HHHHHHHHHHhCCCCcCEEEECCEEEeCHHHHHHHHH
Confidence 4899999999999999999999999999877642 2235678889999999999999999999988877654
No 105
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.97 E-value=4.1e-09 Score=78.30 Aligned_cols=72 Identities=15% Similarity=0.209 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcc----hhhcCCCcHHHHHHHHhc
Q 024495 159 PEVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLED----EYISCRPNIAEYWVLMQQ 230 (267)
Q Consensus 159 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~----~~~~~~p~l~~w~~~~~~ 230 (267)
....++..+++.+.++.+++.|++++|++|+++|.+|+++++.+..+...+.+. ...+.+|+|.+|++||.+
T Consensus 59 ~~~~~~~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 59 TEVEAEIYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNHLKQCPNLCRFCDRILS 134 (137)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHHHHHCcHHHHHHHHHHH
Confidence 345677888899999999999999999999999999999999998776544431 236789999999999975
No 106
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=98.94 E-value=4.7e-09 Score=69.07 Aligned_cols=70 Identities=16% Similarity=0.237 Sum_probs=58.9
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIE 73 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~ 73 (267)
++||..+.||+|.+++-+|...|++|+.+.++... ....+....+..++|++..||..+.++..|.+||+
T Consensus 3 v~lys~~~Cp~C~~ak~~L~~~~i~~~~~~v~~~~---~~~~~~~~~g~~~vP~ifi~g~~igg~~~l~~~l~ 72 (72)
T cd03029 3 VSLFTKPGCPFCARAKAALQENGISYEEIPLGKDI---TGRSLRAVTGAMTVPQVFIDGELIGGSDDLEKYFA 72 (72)
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCCcEEEECCCCh---hHHHHHHHhCCCCcCeEEECCEEEeCHHHHHHHhC
Confidence 57999999999999999999999999998776422 12344455678899999999999999999999974
No 107
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.91 E-value=4.4e-09 Score=73.62 Aligned_cols=71 Identities=15% Similarity=0.340 Sum_probs=59.3
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHH
Q 024495 155 KLKNPEVLKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLM 228 (267)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~ 228 (267)
....+...+....++.+.|+.+|++|++++| +++|+||+++++.+.+......+..+...+|+|.+|+++|
T Consensus 28 ~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 28 EKRSQPWLERQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFRHPDLDWRAAHPALAAWYARF 98 (98)
T ss_pred hhhChHHHHHHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhHccCcchhhhChHHHHHHHhC
Confidence 3466778889999999999999999998888 8999999999999988865433323357899999999985
No 108
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=98.79 E-value=2.2e-08 Score=66.02 Aligned_cols=68 Identities=15% Similarity=0.200 Sum_probs=57.3
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQ 70 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~ 70 (267)
++||+.+.||+|++++.+|.++||+|+.+.++. .....+++.++++..++|++..+|..|+.-.+..+
T Consensus 3 v~ly~~~~C~~C~ka~~~L~~~gi~~~~~di~~--~~~~~~el~~~~g~~~vP~v~i~~~~iGg~~~~~~ 70 (73)
T cd03027 3 VTIYSRLGCEDCTAVRLFLREKGLPYVEINIDI--FPERKAELEERTGSSVVPQIFFNEKLVGGLTDLKS 70 (73)
T ss_pred EEEEecCCChhHHHHHHHHHHCCCceEEEECCC--CHHHHHHHHHHhCCCCcCEEEECCEEEeCHHHHHh
Confidence 589999999999999999999999999886653 23345678888999999999999999988766544
No 109
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=98.69 E-value=7.6e-08 Score=63.21 Aligned_cols=70 Identities=20% Similarity=0.391 Sum_probs=55.2
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEe--echHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHII--FNTIEIIQYI 72 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l--~eS~aI~~yL 72 (267)
++||+.+.||+|++++.+|.+.|++|..+.++- .+...+++.+.++...+|+|..+|..+ .++.+|.++|
T Consensus 2 i~lf~~~~C~~C~~~~~~l~~~~i~~~~vdi~~--~~~~~~~~~~~~~~~~vP~~~~~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 2 VKVYTTPWCPPCKKAKEYLTSKGIAFEEIDVEK--DSAAREEVLKVLGQRGVPVIVIGHKIIVGFDPEKLDQLL 73 (74)
T ss_pred EEEEcCCCChhHHHHHHHHHHCCCeEEEEeccC--CHHHHHHHHHHhCCCcccEEEECCEEEeeCCHHHHHHHh
Confidence 589999999999999999999999998876653 222234567778899999999888777 5666666554
No 110
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=98.68 E-value=8.3e-08 Score=62.62 Aligned_cols=69 Identities=7% Similarity=0.119 Sum_probs=58.1
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQY 71 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~y 71 (267)
+++|+.+.||+|++++.+|..+|++|+.+.++.. +....++.+.++..++|++..+|..++++..|.+.
T Consensus 2 v~ly~~~~Cp~C~~~~~~L~~~~i~~~~~di~~~--~~~~~~l~~~~~~~~~P~~~~~~~~igg~~~~~~~ 70 (72)
T cd02066 2 VVVFSKSTCPYCKRAKRLLESLGIEFEEIDILED--GELREELKELSGWPTVPQIFINGEFIGGYDDLKAL 70 (72)
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCcEEEEECCCC--HHHHHHHHHHhCCCCcCEEEECCEEEecHHHHHHh
Confidence 5799999999999999999999999997766532 22346677788999999999999999999888764
No 111
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=98.68 E-value=5.7e-08 Score=63.69 Aligned_cols=63 Identities=16% Similarity=0.244 Sum_probs=52.5
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeech
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNT 65 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS 65 (267)
+++|+.+.||+|.+++.+|.++|++|+.+.++.. ....+++.+.+|.+++|+|..+|..+.+.
T Consensus 2 v~l~~~~~c~~c~~~~~~l~~~~i~~~~~~i~~~--~~~~~~~~~~~~~~~vP~i~~~~~~i~g~ 64 (73)
T cd02976 2 VTVYTKPDCPYCKATKRFLDERGIPFEEVDVDED--PEALEELKKLNGYRSVPVVVIGDEHLSGF 64 (73)
T ss_pred EEEEeCCCChhHHHHHHHHHHCCCCeEEEeCCCC--HHHHHHHHHHcCCcccCEEEECCEEEecC
Confidence 5899999999999999999999999998877652 33346677889999999999888766654
No 112
>PRK10329 glutaredoxin-like protein; Provisional
Probab=98.62 E-value=1.3e-07 Score=63.45 Aligned_cols=61 Identities=16% Similarity=0.317 Sum_probs=47.5
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeec
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFN 64 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~e 64 (267)
++||..+.||+|.+++-+|.++||+|+.+.++-. +. ..+....++..+||+++.+|..+..
T Consensus 3 v~lYt~~~Cp~C~~ak~~L~~~gI~~~~idi~~~--~~-~~~~~~~~g~~~vPvv~i~~~~~~G 63 (81)
T PRK10329 3 ITIYTRNDCVQCHATKRAMESRGFDFEMINVDRV--PE-AAETLRAQGFRQLPVVIAGDLSWSG 63 (81)
T ss_pred EEEEeCCCCHhHHHHHHHHHHCCCceEEEECCCC--HH-HHHHHHHcCCCCcCEEEECCEEEec
Confidence 5899999999999999999999999999877642 11 1222344688899999988865553
No 113
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=98.60 E-value=1.9e-07 Score=61.77 Aligned_cols=71 Identities=14% Similarity=0.231 Sum_probs=56.4
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCC-cccEEEeCCEEeechHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRA-KLPVLKNGAHIIFNTIEIIQYIE 73 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~-~vP~L~~~~~~l~eS~aI~~yL~ 73 (267)
++||+.+.||+|.+++-+|...||+|+.+.++.. .....++....+.. ++|++..+|..+.+...+.++-.
T Consensus 2 i~ly~~~~Cp~C~~ak~~L~~~~i~~~~i~i~~~--~~~~~~~~~~~~~~~~vP~v~i~g~~igg~~~~~~~~~ 73 (75)
T cd03418 2 VEIYTKPNCPYCVRAKALLDKKGVDYEEIDVDGD--PALREEMINRSGGRRTVPQIFIGDVHIGGCDDLYALER 73 (75)
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCcEEEEECCCC--HHHHHHHHHHhCCCCccCEEEECCEEEeChHHHHHHHh
Confidence 5899999999999999999999999999887743 11223344444444 89999999999999998887643
No 114
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=98.57 E-value=2.4e-07 Score=62.03 Aligned_cols=72 Identities=14% Similarity=0.192 Sum_probs=55.7
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYI 72 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL 72 (267)
+++|..+.||||.++.-+|..+|++|+++.++...++.........++..+||++..||..++....+.++.
T Consensus 3 v~iyt~~~CPyC~~ak~~L~~~g~~~~~i~~~~~~~~~~~~~~~~~~g~~tvP~I~i~~~~igg~~d~~~~~ 74 (80)
T COG0695 3 VTIYTKPGCPYCKRAKRLLDRKGVDYEEIDVDDDEPEEAREMVKRGKGQRTVPQIFIGGKHVGGCDDLDALE 74 (80)
T ss_pred EEEEECCCCchHHHHHHHHHHcCCCcEEEEecCCcHHHHHHHHHHhCCCCCcCEEEECCEEEeCcccHHHHH
Confidence 478999999999999999999999999998887543222233334458999999999998777655555444
No 115
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=98.55 E-value=3.8e-07 Score=61.02 Aligned_cols=72 Identities=14% Similarity=0.260 Sum_probs=59.4
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIER 74 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~ 74 (267)
+++|+.+.||+|.+++-+|..+|++|+.+.++.. +....++...++...+|++..+|..+.+..++..+-++
T Consensus 1 v~ly~~~~Cp~C~~a~~~L~~~~i~~~~~di~~~--~~~~~~~~~~~g~~~vP~i~i~g~~igg~~~~~~~~~~ 72 (79)
T TIGR02181 1 VTIYTKPYCPYCTRAKALLSSKGVTFTEIRVDGD--PALRDEMMQRSGRRTVPQIFIGDVHVGGCDDLYALDRE 72 (79)
T ss_pred CEEEecCCChhHHHHHHHHHHcCCCcEEEEecCC--HHHHHHHHHHhCCCCcCEEEECCEEEcChHHHHHHHHc
Confidence 6899999999999999999999999999988743 12234556667788999999999999998887777653
No 116
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=98.50 E-value=5.6e-07 Score=62.89 Aligned_cols=76 Identities=24% Similarity=0.269 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcc-CCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHHHh
Q 024495 159 PEVLKWSKEHLVRLLDEVETKLN-DTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYKMV 237 (267)
Q Consensus 159 ~~~~~~~~~~~~~~l~~le~~L~-~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~ 237 (267)
....+.....+.+++...+..|. |++||+|+ .|+||..+++++.++...|.. -.+.+..|.++..++|+++++
T Consensus 38 ~pLs~~a~~~a~kL~~~a~~ll~~g~~~LFGe-wsIAD~dlA~ml~Rl~~~gd~-----vP~~l~~Ya~~qwqrpsVQ~W 111 (117)
T PF14834_consen 38 PPLSEAAQAAAQKLIAVAERLLADGGPNLFGE-WSIADADLALMLNRLVTYGDP-----VPERLADYAERQWQRPSVQRW 111 (117)
T ss_dssp ----HHHHHHHHHHHHHHHHHTTT--SSTTSS---HHHHHHHHHHHHHHTTT---------HHHHHHHHHHHT-HHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhccCCCCcccc-chHHHHHHHHHHHHHHHcCCC-----CCHHHHHHHHHHHCCHHHHHH
Confidence 34556677778888999999887 67899995 999999999999999988764 245899999999999999999
Q ss_pred hhc
Q 024495 238 IGN 240 (267)
Q Consensus 238 ~~~ 240 (267)
+..
T Consensus 112 la~ 114 (117)
T PF14834_consen 112 LAL 114 (117)
T ss_dssp HHH
T ss_pred HHH
Confidence 863
No 117
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=98.45 E-value=3.8e-07 Score=60.50 Aligned_cols=64 Identities=11% Similarity=0.222 Sum_probs=51.0
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhC-CCCcccEEE-eCCEEeechH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMN-PRAKLPVLK-NGAHIIFNTI 66 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~-p~~~vP~L~-~~~~~l~eS~ 66 (267)
++||+.++||+|++++..|.+.|++|+.+.++ .++.....+...| +...+|+++ ++|..+.++.
T Consensus 2 v~ly~~~~C~~C~~~~~~L~~~~~~~~~idi~--~~~~~~~~~~~~~~~~~~vP~i~~~~g~~l~~~~ 67 (77)
T TIGR02200 2 ITVYGTTWCGYCAQLMRTLDKLGAAYEWVDIE--EDEGAADRVVSVNNGNMTVPTVKFADGSFLTNPS 67 (77)
T ss_pred EEEEECCCChhHHHHHHHHHHcCCceEEEeCc--CCHhHHHHHHHHhCCCceeCEEEECCCeEecCCC
Confidence 58999999999999999999999999876554 3333445666776 889999997 6777777654
No 118
>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.
Probab=98.44 E-value=6.7e-07 Score=58.69 Aligned_cols=56 Identities=14% Similarity=0.351 Sum_probs=43.8
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGA 59 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~ 59 (267)
|+||+.+.||+|++++-+|.++||+|+.+.++-. .. ..+.....+...||++..+|
T Consensus 1 v~ly~~~~Cp~C~~ak~~L~~~~i~~~~~di~~~--~~-~~~~~~~~g~~~vP~v~~~g 56 (72)
T TIGR02194 1 ITVYSKNNCVQCKMTKKALEEHGIAFEEINIDEQ--PE-AIDYVKAQGFRQVPVIVADG 56 (72)
T ss_pred CEEEeCCCCHHHHHHHHHHHHCCCceEEEECCCC--HH-HHHHHHHcCCcccCEEEECC
Confidence 6899999999999999999999999999877642 11 22233345777899999755
No 119
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=98.33 E-value=3.4e-06 Score=57.26 Aligned_cols=74 Identities=9% Similarity=0.139 Sum_probs=58.7
Q ss_pred CeeecCCCChhHHHHHHHHHh-----cCCceEEEEeCCCCCCCcchhhhhhCCC--CcccEEEeCCEEeechHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEE-----KNIDYTSYHVNPITGKNMDTSFFRMNPR--AKLPVLKNGAHIIFNTIEIIQYIE 73 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~-----~gi~~~~~~v~~~~~~~~~~~~~~~~p~--~~vP~L~~~~~~l~eS~aI~~yL~ 73 (267)
+++|+.+.||+|.+++-+|.. .|++|+.+.++-.. ....++...... ..+|++..||..+.+...|..++.
T Consensus 3 v~iy~~~~C~~C~~a~~~L~~l~~~~~~i~~~~idi~~~~--~~~~el~~~~~~~~~~vP~ifi~g~~igg~~~~~~~~~ 80 (85)
T PRK11200 3 VVIFGRPGCPYCVRAKELAEKLSEERDDFDYRYVDIHAEG--ISKADLEKTVGKPVETVPQIFVDQKHIGGCTDFEAYVK 80 (85)
T ss_pred EEEEeCCCChhHHHHHHHHHhhcccccCCcEEEEECCCCh--HHHHHHHHHHCCCCCcCCEEEECCEEEcCHHHHHHHHH
Confidence 479999999999999999999 89999988776421 112234443333 679999999999999999999998
Q ss_pred Hhc
Q 024495 74 RIS 76 (267)
Q Consensus 74 ~~~ 76 (267)
+.+
T Consensus 81 ~~~ 83 (85)
T PRK11200 81 ENL 83 (85)
T ss_pred Hhc
Confidence 765
No 120
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=98.32 E-value=2.7e-06 Score=57.86 Aligned_cols=74 Identities=7% Similarity=0.108 Sum_probs=56.3
Q ss_pred CeeecCCCChhHHHHHHHHHhcC-----CceEEEEeCCCCCCCcchhhhhhCCC--CcccEEEeCCEEeechHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKN-----IDYTSYHVNPITGKNMDTSFFRMNPR--AKLPVLKNGAHIIFNTIEIIQYIE 73 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~g-----i~~~~~~v~~~~~~~~~~~~~~~~p~--~~vP~L~~~~~~l~eS~aI~~yL~ 73 (267)
+++|+.+.||+|.+++-+|...+ ++|+.+.++.. + ....++...... ..||++..||..+.++.+|..++.
T Consensus 2 V~vys~~~Cp~C~~ak~~L~~~~~~~~~i~~~~idi~~~-~-~~~~~l~~~~g~~~~tVP~ifi~g~~igG~~dl~~~~~ 79 (86)
T TIGR02183 2 VVIFGRPGCPYCVRAKQLAEKLAIERADFEFRYIDIHAE-G-ISKADLEKTVGKPVETVPQIFVDEKHVGGCTDFEQLVK 79 (86)
T ss_pred EEEEeCCCCccHHHHHHHHHHhCcccCCCcEEEEECCCC-H-HHHHHHHHHhCCCCCCcCeEEECCEEecCHHHHHHHHH
Confidence 47999999999999999999985 56776655531 1 112334444433 689999999999999999999998
Q ss_pred Hhc
Q 024495 74 RIS 76 (267)
Q Consensus 74 ~~~ 76 (267)
+.+
T Consensus 80 ~~~ 82 (86)
T TIGR02183 80 ENF 82 (86)
T ss_pred hcc
Confidence 765
No 121
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=98.30 E-value=1.2e-06 Score=55.30 Aligned_cols=60 Identities=18% Similarity=0.260 Sum_probs=48.9
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEe
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHII 62 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l 62 (267)
+++|+.+.||+|.+++-.|..+|++|+...++.. +...+++.+.....++|++..||..|
T Consensus 1 V~vy~~~~C~~C~~~~~~L~~~~i~y~~~dv~~~--~~~~~~l~~~~g~~~~P~v~i~g~~I 60 (60)
T PF00462_consen 1 VVVYTKPGCPYCKKAKEFLDEKGIPYEEVDVDED--EEAREELKELSGVRTVPQVFIDGKFI 60 (60)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTBEEEEEEGGGS--HHHHHHHHHHHSSSSSSEEEETTEEE
T ss_pred cEEEEcCCCcCHHHHHHHHHHcCCeeeEcccccc--hhHHHHHHHHcCCCccCEEEECCEEC
Confidence 4799999999999999999999999999888753 12344555666788999999888654
No 122
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=98.30 E-value=3.2e-06 Score=56.81 Aligned_cols=74 Identities=8% Similarity=0.185 Sum_probs=60.4
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCC-CCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITG-KNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIER 74 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~-~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~ 74 (267)
+++|+.+.||+|.+++-+|...+++|+...++.... +.......+.+...++|++..+|..+.++..|..+..+
T Consensus 2 v~~y~~~~Cp~C~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~P~v~~~g~~igg~~~~~~~~~~ 76 (82)
T cd03419 2 VVVFSKSYCPYCKRAKSLLKELGVKPAVVELDQHEDGSEIQDYLQELTGQRTVPNVFIGGKFIGGCDDLMALHKS 76 (82)
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCCcEEEEEeCCCChHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 478999999999999999999999999988887532 11123344667778999999999999999999888754
No 123
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=98.24 E-value=4.2e-06 Score=58.48 Aligned_cols=72 Identities=8% Similarity=0.175 Sum_probs=56.7
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCC-CCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITG-KNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYI 72 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~-~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL 72 (267)
+++|..+.||+|.+++-+|...|++|+.+.++.... ......+...++..++|.+..+|..|.....+....
T Consensus 10 Vvvysk~~Cp~C~~ak~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~tg~~tvP~Vfi~g~~iGG~ddl~~l~ 82 (99)
T TIGR02189 10 VVIFSRSSCCMCHVVKRLLLTLGVNPAVHEIDKEPAGKDIENALSRLGCSPAVPAVFVGGKLVGGLENVMALH 82 (99)
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCCCEEEEcCCCccHHHHHHHHHHhcCCCCcCeEEECCEEEcCHHHHHHHH
Confidence 478999999999999999999999999988874321 001123445677889999999999999988777643
No 124
>PHA03050 glutaredoxin; Provisional
Probab=98.24 E-value=4.5e-06 Score=59.18 Aligned_cols=70 Identities=9% Similarity=0.120 Sum_probs=56.2
Q ss_pred CeeecCCCChhHHHHHHHHHhcCC---ceEEEEeCCCC-CCCcchhhhhhCCCCcccEEEeCCEEeechHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNI---DYTSYHVNPIT-GKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQ 70 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi---~~~~~~v~~~~-~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~ 70 (267)
+++|..++||||.+++-+|...|+ +|+.+.++-.. +.....++.+.+...+||.+..+|..|....++..
T Consensus 15 V~vys~~~CPyC~~ak~~L~~~~i~~~~~~~i~i~~~~~~~~~~~~l~~~tG~~tVP~IfI~g~~iGG~ddl~~ 88 (108)
T PHA03050 15 VTIFVKFTCPFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITGGRTVPRIFFGKTSIGGYSDLLE 88 (108)
T ss_pred EEEEECCCChHHHHHHHHHHHcCCCcCCcEEEECCCCCCCHHHHHHHHHHcCCCCcCEEEECCEEEeChHHHHH
Confidence 478999999999999999999999 78888777321 12224556677888899999999999998877666
No 125
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=98.08 E-value=1.8e-05 Score=53.24 Aligned_cols=74 Identities=9% Similarity=0.243 Sum_probs=58.5
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCc--eEEEEeCCCCCC-CcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNID--YTSYHVNPITGK-NMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIER 74 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~--~~~~~v~~~~~~-~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~ 74 (267)
+++|+.++||+|.+++-+|...+++ |+...++..... .....+.+.....++|.+..+|..+.++..+..+..+
T Consensus 1 V~~f~~~~Cp~C~~~~~~L~~~~i~~~~~~~~v~~~~~~~~~~~~l~~~~g~~~vP~v~i~g~~igg~~~~~~~~~~ 77 (84)
T TIGR02180 1 VVVFSKSYCPYCKKAKEILAKLNVKPAYEVVELDQLSNGSEIQDYLEEITGQRTVPNIFINGKFIGGCSDLLALYKS 77 (84)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCCCCCEEEEeeCCCChHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 5789999999999999999999999 888888764321 1112244556677899999999999999988887753
No 126
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=98.01 E-value=3e-05 Score=50.54 Aligned_cols=55 Identities=18% Similarity=0.301 Sum_probs=47.9
Q ss_pred CChhHHHHHHHHHhcCCc---eEEEEeCCCCCCCcchhhhhhCCCCcccEEEe-CCEEeechHHHHHHH
Q 024495 8 YSLDSQKVRLALEEKNID---YTSYHVNPITGKNMDTSFFRMNPRAKLPVLKN-GAHIIFNTIEIIQYI 72 (267)
Q Consensus 8 ~s~~~~~vr~~L~~~gi~---~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~-~~~~l~eS~aI~~yL 72 (267)
.+|-|..+.++|+..+.+ |+++..+ +++ ++|.|++|+|.+ ++..+.+-..|++||
T Consensus 13 id~ecLa~~~yl~~~~~~~~~~~vv~s~-------n~~---~Sptg~LP~L~~~~~~~vsg~~~Iv~yL 71 (72)
T PF10568_consen 13 IDPECLAVIAYLKFAGAPEQQFKVVPSN-------NPW---LSPTGELPALIDSGGTWVSGFRNIVEYL 71 (72)
T ss_pred cCHHHHHHHHHHHhCCCCCceEEEEEcC-------CCC---cCCCCCCCEEEECCCcEEECHHHHHHhh
Confidence 568999999999999999 7776554 222 689999999998 899999999999998
No 127
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=97.97 E-value=3.3e-05 Score=53.70 Aligned_cols=64 Identities=11% Similarity=0.078 Sum_probs=50.5
Q ss_pred CCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHH
Q 024495 7 PYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYI 72 (267)
Q Consensus 7 ~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL 72 (267)
+.||||.+++-+|..+||+|+.+.++ .......+....+...++|.+..+|..|....++....
T Consensus 25 ~~Cp~C~~ak~lL~~~~i~~~~~di~--~~~~~~~~l~~~tg~~tvP~vfi~g~~iGG~ddl~~l~ 88 (97)
T TIGR00365 25 PQCGFSARAVQILKACGVPFAYVNVL--EDPEIRQGIKEYSNWPTIPQLYVKGEFVGGCDIIMEMY 88 (97)
T ss_pred CCCchHHHHHHHHHHcCCCEEEEECC--CCHHHHHHHHHHhCCCCCCEEEECCEEEeChHHHHHHH
Confidence 88999999999999999999987664 22222334446677789999999999999888777654
No 128
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=97.92 E-value=5.3e-05 Score=51.95 Aligned_cols=65 Identities=14% Similarity=0.161 Sum_probs=52.2
Q ss_pred CCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHH
Q 024495 7 PYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIE 73 (267)
Q Consensus 7 ~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~ 73 (267)
+.||+|.+++-+|...|++|+.+.++.. .....+..+.+...++|.+..+|..|.+...+.....
T Consensus 21 ~~Cp~C~~ak~~L~~~~i~y~~idv~~~--~~~~~~l~~~~g~~tvP~vfi~g~~iGG~~~l~~l~~ 85 (90)
T cd03028 21 PRCGFSRKVVQILNQLGVDFGTFDILED--EEVRQGLKEYSNWPTFPQLYVNGELVGGCDIVKEMHE 85 (90)
T ss_pred CCCcHHHHHHHHHHHcCCCeEEEEcCCC--HHHHHHHHHHhCCCCCCEEEECCEEEeCHHHHHHHHH
Confidence 7999999999999999999999887632 2223445566778899999999999999888877543
No 129
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=97.64 E-value=0.00015 Score=52.95 Aligned_cols=68 Identities=22% Similarity=0.355 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchH
Q 024495 162 LKWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSY 234 (267)
Q Consensus 162 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 234 (267)
.+...++++..|..+|..+.......| ++|+.||.+|+.|+.+..... +.-.|++.+|+++|++.-.+
T Consensus 57 t~~~i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~Ltivkg----i~~P~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 57 TPELIAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRSLTIVKG----IQWPPKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHHHCTCTT----S---HHHHHHHHHHHHHHT-
T ss_pred CHHHHHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhhhhhccC----CcCCHHHHHHHHHHHHHcCC
Confidence 456677888899999999886555555 899999999999999877632 33457999999999876554
No 130
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=97.56 E-value=0.00056 Score=49.59 Aligned_cols=67 Identities=18% Similarity=0.315 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchH
Q 024495 163 KWSKEHLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSY 234 (267)
Q Consensus 163 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 234 (267)
....++++..|..++..+..... +++.+|+.||.+|+.|+.+..... +.-.|++.+|+++|++...+
T Consensus 59 ~~~i~~l~~~L~~l~~ll~~~~~-~n~~ls~DDi~lFp~LR~Lt~vkg----i~~P~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 59 PQYIAALNALLEELDPLILSSEA-VNGQLSTDDIILFPILRNLTLVKG----LVFPPKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHHHHHHcCccc-cCCcCCHHHHHHHHHHhhhhhhcC----CCCCHHHHHHHHHHHHHhCC
Confidence 46677888889999998854444 455799999999999999877632 34457999999999876543
No 131
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=97.35 E-value=0.00086 Score=50.17 Aligned_cols=71 Identities=17% Similarity=0.196 Sum_probs=54.8
Q ss_pred CeeecCC------CChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCC----CCcccEEEeCCEEeechHHHHH
Q 024495 1 MQLYHHP------YSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNP----RAKLPVLKNGAHIIFNTIEIIQ 70 (267)
Q Consensus 1 ~~Ly~~~------~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p----~~~vP~L~~~~~~l~eS~aI~~ 70 (267)
++||..+ .+|+|.+++.+|+.++|+|+++.+++.. ....+..+... ..++|.+..+|..|.....+.+
T Consensus 2 VvlYttsl~giR~t~~~C~~ak~iL~~~~V~~~e~DVs~~~--~~~~EL~~~~g~~~~~~tvPqVFI~G~~IGG~del~~ 79 (147)
T cd03031 2 VVLYTTSLRGVRKTFEDCNNVRAILESFRVKFDERDVSMDS--GFREELRELLGAELKAVSLPRVFVDGRYLGGAEEVLR 79 (147)
T ss_pred EEEEEcCCcCCCCcChhHHHHHHHHHHCCCcEEEEECCCCH--HHHHHHHHHhCCCCCCCCCCEEEECCEEEecHHHHHH
Confidence 4688888 8999999999999999999998887631 11233444433 3789999999999999888877
Q ss_pred HHH
Q 024495 71 YIE 73 (267)
Q Consensus 71 yL~ 73 (267)
.-+
T Consensus 80 L~e 82 (147)
T cd03031 80 LNE 82 (147)
T ss_pred HHH
Confidence 543
No 132
>PRK10824 glutaredoxin-4; Provisional
Probab=97.20 E-value=0.0015 Score=46.64 Aligned_cols=64 Identities=11% Similarity=0.058 Sum_probs=51.9
Q ss_pred CCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHH
Q 024495 7 PYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYI 72 (267)
Q Consensus 7 ~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL 72 (267)
|.||||.++.-+|...|++|+...++-. ......+...+...+||-+-.+|..|+....+....
T Consensus 28 p~Cpyc~~ak~lL~~~~i~~~~idi~~d--~~~~~~l~~~sg~~TVPQIFI~G~~IGG~ddl~~l~ 91 (115)
T PRK10824 28 PSCGFSAQAVQALSACGERFAYVDILQN--PDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEMY 91 (115)
T ss_pred CCCchHHHHHHHHHHcCCCceEEEecCC--HHHHHHHHHHhCCCCCCeEEECCEEEcChHHHHHHH
Confidence 6999999999999999999998776532 223345556777899999999999999988877754
No 133
>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional
Probab=97.19 E-value=0.0012 Score=58.25 Aligned_cols=69 Identities=10% Similarity=0.140 Sum_probs=53.0
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhh---------hhCCCCcccEEEeCCEEeechHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFF---------RMNPRAKLPVLKNGAHIIFNTIEIIQY 71 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~---------~~~p~~~vP~L~~~~~~l~eS~aI~~y 71 (267)
+++|+.+.||+|.++.-+|..+||+|+.+.++- .+. ..++. ..++..+||++..||..+.+-.++...
T Consensus 4 V~vys~~~Cp~C~~aK~~L~~~gi~~~~idi~~--~~~-~~~~~~~~~~~~~~~~~g~~tvP~ifi~~~~igGf~~l~~~ 80 (410)
T PRK12759 4 VRIYTKTNCPFCDLAKSWFGANDIPFTQISLDD--DVK-RAEFYAEVNKNILLVEEHIRTVPQIFVGDVHIGGYDNLMAR 80 (410)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCCeEEEECCC--Chh-HHHHHHHHhhccccccCCCCccCeEEECCEEEeCchHHHHH
Confidence 479999999999999999999999999988862 111 11221 224567899999999989888877664
Q ss_pred H
Q 024495 72 I 72 (267)
Q Consensus 72 L 72 (267)
-
T Consensus 81 ~ 81 (410)
T PRK12759 81 A 81 (410)
T ss_pred h
Confidence 3
No 134
>PTZ00062 glutaredoxin; Provisional
Probab=96.86 E-value=0.0042 Score=49.17 Aligned_cols=64 Identities=16% Similarity=0.202 Sum_probs=50.6
Q ss_pred CCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHH
Q 024495 7 PYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYI 72 (267)
Q Consensus 7 ~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL 72 (267)
|.||+|+++.-+|...||+|+...++ .++.....+...+...++|.+..+|..|.....+....
T Consensus 126 p~C~~C~~~k~~L~~~~i~y~~~DI~--~d~~~~~~l~~~sg~~TvPqVfI~G~~IGG~d~l~~l~ 189 (204)
T PTZ00062 126 PFCRFSNAVVNMLNSSGVKYETYNIF--EDPDLREELKVYSNWPTYPQLYVNGELIGGHDIIKELY 189 (204)
T ss_pred CCChhHHHHHHHHHHcCCCEEEEEcC--CCHHHHHHHHHHhCCCCCCeEEECCEEEcChHHHHHHH
Confidence 68999999999999999999987665 32333344556677789999999999999887777644
No 135
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=96.85 E-value=0.00094 Score=58.96 Aligned_cols=71 Identities=14% Similarity=0.194 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHHHhh
Q 024495 168 HLVRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYKMVI 238 (267)
Q Consensus 168 ~~~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 238 (267)
.+...+..+...|.-+.||+|..+|+||+++|+.++.-............+-++.+|++-.+..++.++..
T Consensus 92 ~~s~~~~~ld~~l~~~t~lvg~sls~Ad~aiw~~l~~n~~~~~~lk~~k~~~~v~Rw~~~~~~~~a~~~v~ 162 (712)
T KOG1147|consen 92 EISSSLSELDKFLVLRTFLVGNSLSIADFAIWGALHSNGMRQEQLKAKKDYQNVERWYDLPEFQEAHNKVL 162 (712)
T ss_pred HHHHHHHHHHhhhhHHHHhhccchhHHHHHHHHHHhcccchHHHHHhhCCchhhhhhcCcHhHHHHHHHHH
Confidence 55567778888888889999999999999999999864333222111345678999998444444444444
No 136
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=96.84 E-value=0.0062 Score=42.65 Aligned_cols=72 Identities=6% Similarity=0.163 Sum_probs=57.6
Q ss_pred eeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCC-CCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHH
Q 024495 2 QLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITG-KNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIE 73 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~-~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~ 73 (267)
..|.=..||+|.++.-+|...|+++.++++|-... ......+.+.....+||.+-.+|..+.....+..+=.
T Consensus 17 VifSKs~C~~c~~~k~ll~~~~v~~~vvELD~~~~g~eiq~~l~~~tg~~tvP~vFI~Gk~iGG~~dl~~lh~ 89 (104)
T KOG1752|consen 17 VIFSKSSCPYCHRAKELLSDLGVNPKVVELDEDEDGSEIQKALKKLTGQRTVPNVFIGGKFIGGASDLMALHK 89 (104)
T ss_pred EEEECCcCchHHHHHHHHHhCCCCCEEEEccCCCCcHHHHHHHHHhcCCCCCCEEEECCEEEcCHHHHHHHHH
Confidence 35667889999999999999999999999887532 2334445566667799999999999999988877643
No 137
>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri
Probab=96.84 E-value=0.0043 Score=39.62 Aligned_cols=57 Identities=11% Similarity=0.093 Sum_probs=39.7
Q ss_pred CeeecCCCChhHHHHHHHHHhc-----CCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEee
Q 024495 1 MQLYHHPYSLDSQKVRLALEEK-----NIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIF 63 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~-----gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~ 63 (267)
+++|+.++||+|.++.-.|.+. +++|....++ . .++......-..+|++..+|..++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~id~~--~----~~~l~~~~~i~~vPti~i~~~~~~ 64 (67)
T cd02973 3 IEVFVSPTCPYCPDAVQAANRIAALNPNISAEMIDAA--E----FPDLADEYGVMSVPAIVINGKVEF 64 (67)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHhCCceEEEEEEcc--c----CHhHHHHcCCcccCEEEECCEEEE
Confidence 4789999999999999988865 5666555443 2 233444444557999998886654
No 138
>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.
Probab=96.73 E-value=0.0021 Score=45.81 Aligned_cols=33 Identities=24% Similarity=0.489 Sum_probs=30.4
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNP 33 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~ 33 (267)
|+||+.+.||+|++++-.|..+|++|+.+.+.-
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~~ 33 (111)
T cd03036 1 LKFYEYPKCSTCRKAKKWLDEHGVDYTAIDIVE 33 (111)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCceEEecccC
Confidence 689999999999999999999999999987653
No 139
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=96.65 E-value=0.0028 Score=44.65 Aligned_cols=32 Identities=28% Similarity=0.381 Sum_probs=30.0
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVN 32 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~ 32 (267)
|++|+.+.||+|++++-.|..+||+|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (105)
T cd02977 1 ITIYGNPNCSTSRKALAWLEEHGIEYEFIDYL 32 (105)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCCcEEEeec
Confidence 68999999999999999999999999988765
No 140
>PRK01655 spxA transcriptional regulator Spx; Reviewed
Probab=96.24 E-value=0.0056 Score=45.03 Aligned_cols=32 Identities=25% Similarity=0.444 Sum_probs=29.8
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVN 32 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~ 32 (267)
+++|+.+.|++|++++-.|..+||+|+.+.+.
T Consensus 2 i~iY~~~~C~~C~ka~~~L~~~gi~~~~idi~ 33 (131)
T PRK01655 2 VTLFTSPSCTSCRKAKAWLEEHDIPFTERNIF 33 (131)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCcEEeecc
Confidence 58999999999999999999999999998765
No 141
>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family. This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.
Probab=96.19 E-value=0.0077 Score=43.36 Aligned_cols=32 Identities=25% Similarity=0.464 Sum_probs=29.7
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVN 32 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~ 32 (267)
+++|+.+.||+|++++-.|.+.||+|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (117)
T TIGR01617 1 IKVYGSPNCTTCKKARRWLEANGIEYQFIDIG 32 (117)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCceEEEecC
Confidence 68999999999999999999999999987664
No 142
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=96.13 E-value=0.0075 Score=43.26 Aligned_cols=32 Identities=25% Similarity=0.428 Sum_probs=29.6
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVN 32 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~ 32 (267)
+++|+.+.|+.|++++-.|..+||+|+.+.+.
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~gi~~~~idi~ 33 (115)
T cd03032 2 IKLYTSPSCSSCRKAKQWLEEHQIPFEERNLF 33 (115)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCceEEEecC
Confidence 48999999999999999999999999988764
No 143
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=95.98 E-value=0.011 Score=41.58 Aligned_cols=32 Identities=25% Similarity=0.272 Sum_probs=29.9
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVN 32 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~ 32 (267)
|++|+.|.|+.|++++-.|.++|++|+.+.+.
T Consensus 1 i~iy~~~~C~~crka~~~L~~~~i~~~~~di~ 32 (105)
T cd03035 1 ITLYGIKNCDTVKKARKWLEARGVAYTFHDYR 32 (105)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCCeEEEecc
Confidence 68999999999999999999999999988665
No 144
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=95.74 E-value=0.012 Score=41.97 Aligned_cols=32 Identities=13% Similarity=0.227 Sum_probs=29.5
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVN 32 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~ 32 (267)
|+||+.|.|+-|++++-.|.++|++|+.+.+.
T Consensus 2 i~iy~~p~C~~crkA~~~L~~~gi~~~~~d~~ 33 (113)
T cd03033 2 IIFYEKPGCANNARQKALLEAAGHEVEVRDLL 33 (113)
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCCcEEeehh
Confidence 58999999999999999999999999987654
No 145
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=95.61 E-value=0.017 Score=42.52 Aligned_cols=33 Identities=12% Similarity=0.318 Sum_probs=30.2
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNP 33 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~ 33 (267)
+++|+.+.|+.|++++-.|...||+|+.+.+.-
T Consensus 2 i~iY~~~~C~~crkA~~~L~~~~i~~~~~d~~~ 34 (132)
T PRK13344 2 IKIYTISSCTSCKKAKTWLNAHQLSYKEQNLGK 34 (132)
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCCeEEEECCC
Confidence 489999999999999999999999999987653
No 146
>PRK12559 transcriptional regulator Spx; Provisional
Probab=95.57 E-value=0.018 Score=42.32 Aligned_cols=33 Identities=30% Similarity=0.447 Sum_probs=30.2
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNP 33 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~ 33 (267)
+++|+.+.|+.|++++-.|..+||+|+.+.+.-
T Consensus 2 i~iY~~~~C~~crkA~~~L~~~gi~~~~~di~~ 34 (131)
T PRK12559 2 VVLYTTASCASCRKAKAWLEENQIDYTEKNIVS 34 (131)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCeEEEEeeC
Confidence 579999999999999999999999999987653
No 147
>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=95.24 E-value=0.059 Score=34.69 Aligned_cols=62 Identities=18% Similarity=0.291 Sum_probs=44.4
Q ss_pred eeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCC--------Ccchhhh--hhCCCCcccEEE-eCCEEee
Q 024495 2 QLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGK--------NMDTSFF--RMNPRAKLPVLK-NGAHIIF 63 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~--------~~~~~~~--~~~p~~~vP~L~-~~~~~l~ 63 (267)
+||+...||-|....-.|+-.+++|+.+.+.-.... +..++|- +.|.+-.+|+|. +||.++.
T Consensus 5 ~lfgsn~Cpdca~a~eyl~rl~v~yd~VeIt~Sm~NlKrFl~lRDs~~~Fd~vk~~gyiGIPall~~d~~vVl 77 (85)
T COG4545 5 KLFGSNLCPDCAPAVEYLERLNVDYDFVEITESMANLKRFLHLRDSRPEFDEVKSNGYIGIPALLTDDGKVVL 77 (85)
T ss_pred eeeccccCcchHHHHHHHHHcCCCceeeehhhhhhhHHHHHhhhccchhHHhhhhcCcccceEEEeCCCcEEE
Confidence 799999999999999999999999999887643211 1234444 234555689997 5555444
No 148
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=95.12 E-value=0.094 Score=35.89 Aligned_cols=68 Identities=16% Similarity=0.124 Sum_probs=48.0
Q ss_pred CeeecCCCCh------hHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhC----CCCcccEEEeCCEEeechHHHHH
Q 024495 1 MQLYHHPYSL------DSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMN----PRAKLPVLKNGAHIIFNTIEIIQ 70 (267)
Q Consensus 1 ~~Ly~~~~s~------~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~----p~~~vP~L~~~~~~l~eS~aI~~ 70 (267)
++||....+. .|++|+.+|.-+||+|+++.++.. +....+..... +..++|-+..+|..+++...+..
T Consensus 2 i~vY~ts~~g~~~~k~~~~~v~~lL~~k~I~f~eiDI~~d--~~~r~em~~~~~~~~g~~tvPQIFi~~~~iGg~ddl~~ 79 (92)
T cd03030 2 IKVYIASSSGSTEIKKRQQEVLGFLEAKKIEFEEVDISMN--EENRQWMRENVPNENGKPLPPQIFNGDEYCGDYEAFFE 79 (92)
T ss_pred EEEEEecccccHHHHHHHHHHHHHHHHCCCceEEEecCCC--HHHHHHHHHhcCCCCCCCCCCEEEECCEEeeCHHHHHH
Confidence 3566555443 467889999999999999988763 22223444443 34789999999999998876655
No 149
>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]
Probab=94.71 E-value=0.045 Score=39.30 Aligned_cols=32 Identities=28% Similarity=0.387 Sum_probs=29.4
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVN 32 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~ 32 (267)
+++|++|.|.-|++++-.|+..||+|+.+.+-
T Consensus 3 itiy~~p~C~t~rka~~~L~~~gi~~~~~~y~ 34 (117)
T COG1393 3 ITIYGNPNCSTCRKALAWLEEHGIEYTFIDYL 34 (117)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCcEEEEee
Confidence 58999999999999999999999999987554
No 150
>TIGR01616 nitro_assoc nitrogenase-associated protein. This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.
Probab=94.53 E-value=0.047 Score=39.79 Aligned_cols=32 Identities=16% Similarity=0.280 Sum_probs=29.4
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVN 32 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~ 32 (267)
|++|+.|.|.-|++.+-.|.++||+|+.+.+-
T Consensus 3 i~iY~~p~Cst~RKA~~~L~~~gi~~~~~d~~ 34 (126)
T TIGR01616 3 IIFYEKPGCANNARQKAALKASGHDVEVQDIL 34 (126)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCCcEEEecc
Confidence 58999999999999999999999999987654
No 151
>PRK10026 arsenate reductase; Provisional
Probab=94.40 E-value=0.054 Score=40.21 Aligned_cols=32 Identities=19% Similarity=0.269 Sum_probs=29.4
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVN 32 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~ 32 (267)
|++|++|.|.-|++++-.|.+.|++|+.+.+-
T Consensus 4 i~iY~~p~Cst~RKA~~wL~~~gi~~~~~d~~ 35 (141)
T PRK10026 4 ITIYHNPACGTSRNTLEMIRNSGTEPTIIHYL 35 (141)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCCcEEEeee
Confidence 58999999999999999999999999987654
No 152
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=94.37 E-value=0.066 Score=38.14 Aligned_cols=32 Identities=25% Similarity=0.342 Sum_probs=29.3
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVN 32 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~ 32 (267)
|++|+.+.|.-|++++-.|.+.|++|+.+.+-
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di~ 32 (112)
T cd03034 1 ITIYHNPRCSKSRNALALLEEAGIEPEIVEYL 32 (112)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEecc
Confidence 68999999999999999999999999987543
No 153
>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=94.28 E-value=0.16 Score=34.79 Aligned_cols=67 Identities=10% Similarity=0.077 Sum_probs=48.5
Q ss_pred cCCCChhHHHHHHHHHhcC-CceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHH
Q 024495 5 HHPYSLDSQKVRLALEEKN-IDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIE 73 (267)
Q Consensus 5 ~~~~s~~~~~vr~~L~~~g-i~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~ 73 (267)
.+|.|+||.++.-+|...| ++|..+.|- ..+.........+-..+.|=|-.+|..+..|.-|.+...
T Consensus 26 ~~P~CGFS~~~vqiL~~~g~v~~~~vnVL--~d~eiR~~lk~~s~WPT~PQLyi~GEfvGG~DIv~Em~q 93 (105)
T COG0278 26 EFPQCGFSAQAVQILSACGVVDFAYVDVL--QDPEIRQGLKEYSNWPTFPQLYVNGEFVGGCDIVREMYQ 93 (105)
T ss_pred CCCCCCccHHHHHHHHHcCCcceeEEeec--cCHHHHhccHhhcCCCCCceeeECCEEeccHHHHHHHHH
Confidence 4789999999999999999 677665443 221112222334557889999999999999987777664
No 154
>TIGR00014 arsC arsenate reductase (glutaredoxin). composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.
Probab=94.18 E-value=0.077 Score=37.93 Aligned_cols=32 Identities=25% Similarity=0.370 Sum_probs=29.3
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVN 32 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~ 32 (267)
|++|+.+.|.-|++++-.|.+.|++|+.+.+.
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di~ 32 (114)
T TIGR00014 1 VTIYHNPRCSKSRNTLALLEDKGIEPEVVKYL 32 (114)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEecc
Confidence 68999999999999999999999999987554
No 155
>PRK10853 putative reductase; Provisional
Probab=94.15 E-value=0.068 Score=38.47 Aligned_cols=32 Identities=28% Similarity=0.274 Sum_probs=29.1
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVN 32 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~ 32 (267)
|++|+.+.|.-|++++-.|.+.|++|+.+.+-
T Consensus 2 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~d~~ 33 (118)
T PRK10853 2 VTLYGIKNCDTIKKARRWLEAQGIDYRFHDYR 33 (118)
T ss_pred EEEEcCCCCHHHHHHHHHHHHcCCCcEEeehc
Confidence 58999999999999999999999999987553
No 156
>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1. This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.
Probab=93.44 E-value=0.34 Score=31.83 Aligned_cols=56 Identities=11% Similarity=0.084 Sum_probs=37.6
Q ss_pred CeeecCCCChhHHHHHHHHHh----cCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCE
Q 024495 1 MQLYHHPYSLDSQKVRLALEE----KNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAH 60 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~----~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~ 60 (267)
+++|+.++||+|..+.-.|.. .+..+....+|... .++......-..+|++..+|.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~vd~~~----~~~~~~~~~v~~vPt~~~~g~ 62 (82)
T TIGR00411 3 IELFTSPTCPYCPAAKRVVEEVAKEMGDAVEVEYINVME----NPQKAMEYGIMAVPAIVINGD 62 (82)
T ss_pred EEEEECCCCcchHHHHHHHHHHHHHhcCceEEEEEeCcc----CHHHHHHcCCccCCEEEECCE
Confidence 478999999999988888753 34446666666543 233333344567999987664
No 157
>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.
Probab=93.30 E-value=0.26 Score=29.71 Aligned_cols=53 Identities=17% Similarity=0.251 Sum_probs=36.4
Q ss_pred CeeecCCCChhHHHHHHHHH-----hcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEE
Q 024495 1 MQLYHHPYSLDSQKVRLALE-----EKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK 56 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~-----~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~ 56 (267)
|.+|+...|++|.+++..+. ..++.+..+.++.... ........+...+|+++
T Consensus 1 l~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~P~~~ 58 (69)
T cd01659 1 LVLFYAPWCPFCQALRPVLAELALLNKGVKFEAVDVDEDPA---LEKELKRYGVGGVPTLV 58 (69)
T ss_pred CEEEECCCChhHHhhhhHHHHHHhhCCCcEEEEEEcCCChH---HhhHHHhCCCccccEEE
Confidence 56788999999999999999 4566666655543221 11122456788999987
No 158
>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2. This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.
Probab=93.21 E-value=0.55 Score=30.70 Aligned_cols=53 Identities=15% Similarity=0.108 Sum_probs=36.9
Q ss_pred ecCCCChhHHHH----HHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEee
Q 024495 4 YHHPYSLDSQKV----RLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIF 63 (267)
Q Consensus 4 y~~~~s~~~~~v----r~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~ 63 (267)
++.++||.|..+ .-++.+.|+.++...++- .++..+ -....+|++..+|..+.
T Consensus 5 ~~a~~C~~C~~~~~~~~~~~~e~~~~~~~~~v~~------~~~a~~-~~v~~vPti~i~G~~~~ 61 (76)
T TIGR00412 5 IYGTGCANCQMTEKNVKKAVEELGIDAEFEKVTD------MNEILE-AGVTATPGVAVDGELVI 61 (76)
T ss_pred EECCCCcCHHHHHHHHHHHHHHcCCCeEEEEeCC------HHHHHH-cCCCcCCEEEECCEEEE
Confidence 345999999988 668888899888887771 122222 33567999997775543
No 159
>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides. AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.
Probab=93.04 E-value=0.34 Score=32.90 Aligned_cols=57 Identities=12% Similarity=0.002 Sum_probs=36.8
Q ss_pred CeeecCCCChhHHHHHHHHHhc-----CCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEee
Q 024495 1 MQLYHHPYSLDSQKVRLALEEK-----NIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIF 63 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~-----gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~ 63 (267)
+++|..++|++|..+.-++... ++.+..+.++- .++......-..+|.++.+|..+.
T Consensus 16 i~~F~~~~C~~C~~~~~~~~~l~~~~~~i~~~~vd~~~------~~e~a~~~~V~~vPt~vidG~~~~ 77 (89)
T cd03026 16 FETYVSLSCHNCPDVVQALNLMAVLNPNIEHEMIDGAL------FQDEVEERGIMSVPAIFLNGELFG 77 (89)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHHCCCceEEEEEhHh------CHHHHHHcCCccCCEEEECCEEEE
Confidence 4688999999999888776654 45555554432 233333333456999997775544
No 160
>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.
Probab=92.97 E-value=0.35 Score=32.15 Aligned_cols=54 Identities=20% Similarity=0.286 Sum_probs=38.8
Q ss_pred CeeecCCCChhHHHHHHHHHhcC--CceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCC
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKN--IDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGA 59 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~g--i~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~ 59 (267)
++||+-+.|+.|..+.-.|.... .+|+...+|...+ +.+...- ...+|||..+|
T Consensus 2 l~l~~k~~C~LC~~a~~~L~~~~~~~~~~l~~vDI~~d----~~l~~~Y-~~~IPVl~~~~ 57 (81)
T PF05768_consen 2 LTLYTKPGCHLCDEAKEILEEVAAEFPFELEEVDIDED----PELFEKY-GYRIPVLHIDG 57 (81)
T ss_dssp EEEEE-SSSHHHHHHHHHHHHCCTTSTCEEEEEETTTT----HHHHHHS-CTSTSEEEETT
T ss_pred EEEEcCCCCChHHHHHHHHHHHHhhcCceEEEEECCCC----HHHHHHh-cCCCCEEEEcC
Confidence 57999999999999999999644 4677878887643 3333332 24799999766
No 161
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=92.47 E-value=0.39 Score=36.89 Aligned_cols=44 Identities=18% Similarity=0.247 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHccCC---ceeccCC-CchhHHHHHHHHHHHhhcCCc
Q 024495 168 HLVRLLDEVETKLNDT---AYLAGEE-FTMADVMLIPVFSRLKLLDLE 211 (267)
Q Consensus 168 ~~~~~l~~le~~L~~~---~~l~G~~-~t~AD~~l~~~l~~~~~~~~~ 211 (267)
...+++..+++.|++. .|++|+. +|-+||.+++.+.-+....++
T Consensus 112 ~a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~l~p~LP 159 (168)
T PF11801_consen 112 LAMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALLLVPELP 159 (168)
T ss_pred HHHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhcccCC
Confidence 3567899999999988 9999977 999999999999887755544
No 162
>PF11287 DUF3088: Protein of unknown function (DUF3088); InterPro: IPR021439 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=92.41 E-value=0.43 Score=33.57 Aligned_cols=68 Identities=15% Similarity=0.166 Sum_probs=43.0
Q ss_pred CChhHHHHHHHHHhc---CCceEEEEeCCCCCCCcchhhhh-hCC-CCcccEEE-eCC-------------EEeechHHH
Q 024495 8 YSLDSQKVRLALEEK---NIDYTSYHVNPITGKNMDTSFFR-MNP-RAKLPVLK-NGA-------------HIIFNTIEI 68 (267)
Q Consensus 8 ~s~~~~~vr~~L~~~---gi~~~~~~v~~~~~~~~~~~~~~-~~p-~~~vP~L~-~~~-------------~~l~eS~aI 68 (267)
+||.|..+.=+|... .-..+++.|+..+. ...... +.. ...+|+|+ .+| ..|.++..|
T Consensus 23 ~Cp~c~~iEGlLa~~P~l~~~ldV~rV~f~RP---R~~vi~llGE~~QslPvLVL~~~~~~~~~~~~~~~~rfi~d~~~I 99 (112)
T PF11287_consen 23 YCPHCAAIEGLLASFPDLRERLDVRRVDFPRP---RQAVIALLGEANQSLPVLVLADGAPSPDDAGSHGGRRFIDDPRRI 99 (112)
T ss_pred ECCchHHHHhHHhhChhhhhcccEEEeCCCCc---hHHHHHHhChhccCCCEEEeCCCCCCcccccccCCeEEeCCHHHH
Confidence 467777666666532 22466667776543 122222 222 56699998 333 389999999
Q ss_pred HHHHHHhcCC
Q 024495 69 IQYIERISVV 78 (267)
Q Consensus 69 ~~yL~~~~~~ 78 (267)
++||.+.++.
T Consensus 100 ~~~La~r~g~ 109 (112)
T PF11287_consen 100 LRYLAERHGF 109 (112)
T ss_pred HHHHHHHcCC
Confidence 9999998853
No 163
>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised. SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.
Probab=91.45 E-value=0.46 Score=32.96 Aligned_cols=70 Identities=16% Similarity=0.157 Sum_probs=41.0
Q ss_pred CeeecCCCCh------hHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhC---------CCCcccEEEeCCEEeech
Q 024495 1 MQLYHHPYSL------DSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMN---------PRAKLPVLKNGAHIIFNT 65 (267)
Q Consensus 1 ~~Ly~~~~s~------~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~---------p~~~vP~L~~~~~~l~eS 65 (267)
|++|....+. ..+++...|..++|+|+.+.+.. .+....+.++.. +....|-+..||..+++-
T Consensus 3 I~vy~ss~sg~~~ikk~q~~v~~iL~a~kI~fe~vDIa~--~e~~r~~mr~~~g~~~~~~~~~~~lpPqiF~~~~Y~Gdy 80 (99)
T PF04908_consen 3 IKVYISSISGSREIKKRQQRVLMILEAKKIPFEEVDIAM--DEEARQWMRENAGPEEKDPGNGKPLPPQIFNGDEYCGDY 80 (99)
T ss_dssp EEEEE-SS-SSHHHHHHHHHHHHHHHHTT--EEEEETTT---HHHHHHHHHHT--CCCS-TSTT--S-EEEETTEEEEEH
T ss_pred EEEEEecccCCHHHHHHHHHHHHHHHHcCCCcEEEeCcC--CHHHHHHHHHhccccccCCCCCCCCCCEEEeCCEEEeeH
Confidence 3566655553 34589999999999999876655 333333444333 233457888899999887
Q ss_pred HHHHHHH
Q 024495 66 IEIIQYI 72 (267)
Q Consensus 66 ~aI~~yL 72 (267)
..+-+.-
T Consensus 81 e~f~ea~ 87 (99)
T PF04908_consen 81 EDFEEAN 87 (99)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7655544
No 164
>PHA02125 thioredoxin-like protein
Probab=90.29 E-value=1 Score=29.22 Aligned_cols=51 Identities=22% Similarity=0.340 Sum_probs=35.2
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEe
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKN 57 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~ 57 (267)
+.+|+.++|+.|..+.-.|+ ++.++...+|... .++..+...-..+|++..
T Consensus 2 iv~f~a~wC~~Ck~~~~~l~--~~~~~~~~vd~~~----~~~l~~~~~v~~~PT~~~ 52 (75)
T PHA02125 2 IYLFGAEWCANCKMVKPMLA--NVEYTYVDVDTDE----GVELTAKHHIRSLPTLVN 52 (75)
T ss_pred EEEEECCCCHhHHHHHHHHH--HHhheEEeeeCCC----CHHHHHHcCCceeCeEEC
Confidence 36789999999999888886 3566666666432 234444444567999984
No 165
>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B ....
Probab=88.91 E-value=1.8 Score=28.22 Aligned_cols=55 Identities=15% Similarity=0.141 Sum_probs=34.1
Q ss_pred eeecCCCChhHHHHHH----HHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeec
Q 024495 2 QLYHHPYSLDSQKVRL----ALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFN 64 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~----~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~e 64 (267)
++ ..+.||+|..+.- ++...|+.++...+ .. .++. ....-..+|.+..||...+.
T Consensus 4 ~v-~~~~C~~C~~~~~~~~~~~~~~~i~~ei~~~--~~----~~~~-~~ygv~~vPalvIng~~~~~ 62 (76)
T PF13192_consen 4 KV-FSPGCPYCPELVQLLKEAAEELGIEVEIIDI--ED----FEEI-EKYGVMSVPALVINGKVVFV 62 (76)
T ss_dssp EE-ECSSCTTHHHHHHHHHHHHHHTTEEEEEEET--TT----HHHH-HHTT-SSSSEEEETTEEEEE
T ss_pred EE-eCCCCCCcHHHHHHHHHHHHhcCCeEEEEEc--cC----HHHH-HHcCCCCCCEEEECCEEEEE
Confidence 45 4566999996555 55667777766554 21 2333 44456679999988865554
No 166
>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []. This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....
Probab=85.53 E-value=1 Score=31.82 Aligned_cols=29 Identities=28% Similarity=0.371 Sum_probs=22.4
Q ss_pred ecCCCChhHHHHHHHHHhcCCceEEEEeC
Q 024495 4 YHHPYSLDSQKVRLALEEKNIDYTSYHVN 32 (267)
Q Consensus 4 y~~~~s~~~~~vr~~L~~~gi~~~~~~v~ 32 (267)
|+.+.|.-|++++-.|.+.|++|+.+.+.
T Consensus 1 Y~~~~C~t~rka~~~L~~~gi~~~~~d~~ 29 (110)
T PF03960_consen 1 YGNPNCSTCRKALKWLEENGIEYEFIDYK 29 (110)
T ss_dssp EE-TT-HHHHHHHHHHHHTT--EEEEETT
T ss_pred CcCCCCHHHHHHHHHHHHcCCCeEeehhh
Confidence 78999999999999999999999987553
No 167
>KOG0911 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=79.78 E-value=4.7 Score=32.21 Aligned_cols=67 Identities=18% Similarity=0.192 Sum_probs=49.4
Q ss_pred cCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHH
Q 024495 5 HHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIE 73 (267)
Q Consensus 5 ~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~ 73 (267)
..|.|++++++.-.|+..|++|+...|- .++.........+-..+.|=|-.+|..+.+..-|...+.
T Consensus 150 ~~P~CGFS~~~v~iL~~~nV~~~~fdIL--~DeelRqglK~fSdWPTfPQlyI~GEFiGGlDIl~~m~~ 216 (227)
T KOG0911|consen 150 EEPKCGFSRQLVGILQSHNVNYTIFDVL--TDEELRQGLKEFSDWPTFPQLYVKGEFIGGLDILKEMHE 216 (227)
T ss_pred CcccccccHHHHHHHHHcCCCeeEEecc--CCHHHHHHhhhhcCCCCccceeECCEeccCcHHHHHHhh
Confidence 4688999999999999999998876544 322222233345667888988899999998776666554
No 168
>cd02947 TRX_family TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functio
Probab=78.65 E-value=11 Score=24.41 Aligned_cols=53 Identities=11% Similarity=0.246 Sum_probs=33.6
Q ss_pred eeecCCCChhHHHHHHHHHh-----cCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEE--eCCE
Q 024495 2 QLYHHPYSLDSQKVRLALEE-----KNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK--NGAH 60 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L~~-----~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~ 60 (267)
..|+.++|+.|+...-.+.. .++.+-.+..+ . ...+........+|++. .+|.
T Consensus 15 l~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~i~~~--~----~~~~~~~~~v~~~P~~~~~~~g~ 74 (93)
T cd02947 15 VDFWAPWCGPCKAIAPVLEELAEEYPKVKFVKVDVD--E----NPELAEEYGVRSIPTFLFFKNGK 74 (93)
T ss_pred EEEECCCChhHHHhhHHHHHHHHHCCCceEEEEECC--C----ChhHHHhcCcccccEEEEEECCE
Confidence 45788899999988887776 66655544333 2 23344344455689876 4554
No 169
>cd02949 TRX_NTR TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains. The TRX domain functions as a protein disulfide reductase via the reversible oxidation of an active center dithiol present in a CXXC motif, while the NTR domain functions as a reductant to oxidized TRX. The fusion protein is bifunctional, showing both TRX and NTR activities, but it is not an independent NTR/TRX system. In plants, the protein is found exclusively in shoots and mature leaves and is localized in the chloroplast. It is involved in plant protection against oxidative stress.
Probab=76.20 E-value=13 Score=25.16 Aligned_cols=57 Identities=11% Similarity=0.127 Sum_probs=33.6
Q ss_pred eeecCCCChhHHHHHHHHHh----cCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEE--eCCEEe
Q 024495 2 QLYHHPYSLDSQKVRLALEE----KNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK--NGAHII 62 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L~~----~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~l 62 (267)
.+|+.++|+.|....-.+.. .+-.+....+|... .+++....--..+|++. .+|..+
T Consensus 18 v~f~a~~C~~C~~~~~~l~~l~~~~~~~v~~~~id~d~----~~~l~~~~~v~~vPt~~i~~~g~~v 80 (97)
T cd02949 18 VLYTSPTCGPCRTLKPILNKVIDEFDGAVHFVEIDIDE----DQEIAEAAGIMGTPTVQFFKDKELV 80 (97)
T ss_pred EEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCC----CHHHHHHCCCeeccEEEEEECCeEE
Confidence 46788999999988777754 11124444555432 33444333346789876 556544
No 170
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=72.93 E-value=2.7 Score=38.50 Aligned_cols=60 Identities=10% Similarity=-0.007 Sum_probs=38.7
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCc---eEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeec
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNID---YTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFN 64 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~---~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~e 64 (267)
|++|..+.||||-.+.-+++..-+. .+...+|- ..-+++...-....||.+..+|..+.+
T Consensus 120 i~~fv~~~Cp~Cp~~v~~~~~~a~~~~~i~~~~id~----~~~~~~~~~~~v~~VP~~~i~~~~~~~ 182 (517)
T PRK15317 120 FETYVSLSCHNCPDVVQALNLMAVLNPNITHTMIDG----ALFQDEVEARNIMAVPTVFLNGEEFGQ 182 (517)
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHHhCCCceEEEEEc----hhCHhHHHhcCCcccCEEEECCcEEEe
Confidence 4789999999999877777655442 33333342 223555555556689999977655554
No 171
>PF00085 Thioredoxin: Thioredoxin; InterPro: IPR013766 Thioredoxins [, , , ] are small disulphide-containing redox proteins that have been found in all the kingdoms of living organisms. Thioredoxin serves as a general protein disulphide oxidoreductase. It interacts with a broad range of proteins by a redox mechanism based on reversible oxidation of two cysteine thiol groups to a disulphide, accompanied by the transfer of two electrons and two protons. The net result is the covalent interconversion of a disulphide and a dithiol. In the NADPH-dependent protein disulphide reduction, thioredoxin reductase (TR) catalyses the reduction of oxidised thioredoxin (trx) by NADPH using FAD and its redox-active disulphide; reduced thioredoxin then directly reduces the disulphide in the substrate protein []. Thioredoxin is present in prokaryotes and eukaryotes and the sequence around the redox-active disulphide bond is well conserved. All thioredoxins contain a cis-proline located in a loop preceding beta-strand 4, which makes contact with the active site cysteines, and is important for stability and function []. Thioredoxin belongs to a structural family that includes glutaredoxin, glutathione peroxidase, bacterial protein disulphide isomerase DsbA, and the N-terminal domain of glutathione transferase []. Thioredoxins have a beta-alpha unit preceding the motif common to all these proteins. A number of eukaryotic proteins contain domains evolutionary related to thioredoxin, most of them are protein disulphide isomerases (PDI). PDI (5.3.4.1 from EC) [, , ] is an endoplasmic reticulum multi-functional enzyme that catalyses the formation and rearrangement of disulphide bonds during protein folding []. All PDI contains two or three (ERp72) copies of the thioredoxin domain, each of which contributes to disulphide isomerase activity, but which are functionally non-equivalent []. Moreover, PDI exhibits chaperone-like activity towards proteins that contain no disulphide bonds, i.e. behaving independently of its disulphide isomerase activity []. The various forms of PDI which are currently known are: PDI major isozyme; a multifunctional protein that also function as the beta subunit of prolyl 4-hydroxylase (1.14.11.2 from EC), as a component of oligosaccharyl transferase (2.4.1.119 from EC), as thyroxine deiodinase (3.8.1.4 from EC), as glutathione-insulin transhydrogenase (1.8.4.2 from EC) and as a thyroid hormone-binding protein ERp60 (ER-60; 58 Kd microsomal protein). ERp60 was originally thought to be a phosphoinositide-specific phospholipase C isozyme and later to be a protease. ERp72. ERp5. Bacterial proteins that act as thiol:disulphide interchange proteins that allows disulphide bond formation in some periplasmic proteins also contain a thioredoxin domain. These proteins include: Escherichia coli DsbA (or PrfA) and its orthologs in Vibrio cholerae (TtcpG) and Haemophilus influenzae (Por). E. coli DsbC (or XpRA) and its orthologues in Erwinia chrysanthemi and H. influenzae. E. coli DsbD (or DipZ) and its H. influenzae orthologue. E. coli DsbE (or CcmG) and orthologues in H. influenzae. Rhodobacter capsulatus (Rhodopseudomonas capsulata) (HelX), Rhiziobiacae (CycY and TlpA). This entry represents the thioredoxin domain.; GO: 0045454 cell redox homeostasis; PDB: 3ED3_B 1EP7_A 1EP8_B 1TOF_A 2OE3_B 2OE1_B 2OE0_B 1V98_A 3H79_A 3CXG_A ....
Probab=70.94 E-value=29 Score=23.27 Aligned_cols=68 Identities=15% Similarity=0.252 Sum_probs=41.7
Q ss_pred eeecCCCChhHHHHHHHHH-----hcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEE--eCCEEee------chHHH
Q 024495 2 QLYHHPYSLDSQKVRLALE-----EKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK--NGAHIIF------NTIEI 68 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L~-----~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~l~------eS~aI 68 (267)
..|+.++|+.|+...-.+. ..+ ++....+|... .+.+.+.-.-..+|.+. .+|..+. +...|
T Consensus 22 v~f~~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~----~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l 96 (103)
T PF00085_consen 22 VYFYAPWCPPCKAFKPILEKLAKEYKD-NVKFAKVDCDE----NKELCKKYGVKSVPTIIFFKNGKEVKRYNGPRNAESL 96 (103)
T ss_dssp EEEESTTSHHHHHHHHHHHHHHHHTTT-TSEEEEEETTT----SHHHHHHTTCSSSSEEEEEETTEEEEEEESSSSHHHH
T ss_pred EEEeCCCCCccccccceeccccccccc-ccccchhhhhc----cchhhhccCCCCCCEEEEEECCcEEEEEECCCCHHHH
Confidence 4678899999998774443 332 56666667643 24444444567799887 5664332 33456
Q ss_pred HHHHHH
Q 024495 69 IQYIER 74 (267)
Q Consensus 69 ~~yL~~ 74 (267)
..+|.+
T Consensus 97 ~~~i~~ 102 (103)
T PF00085_consen 97 IEFIEK 102 (103)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 666654
No 172
>TIGR01295 PedC_BrcD bacteriocin transport accessory protein, putative. This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris.
Probab=70.50 E-value=31 Score=24.73 Aligned_cols=60 Identities=8% Similarity=-0.024 Sum_probs=32.2
Q ss_pred eecCCCChhHHHHHHHHH----hcCCceEEEEeCCCCC-CCcc----hhhhhhC----CCCcccEEE--eCCEEe
Q 024495 3 LYHHPYSLDSQKVRLALE----EKNIDYTSYHVNPITG-KNMD----TSFFRMN----PRAKLPVLK--NGAHII 62 (267)
Q Consensus 3 Ly~~~~s~~~~~vr~~L~----~~gi~~~~~~v~~~~~-~~~~----~~~~~~~----p~~~vP~L~--~~~~~l 62 (267)
-|+.++||+|+.+.-.|. ..++++-.+.++.... +... .++.+.. .-..+|+++ .+|..+
T Consensus 29 ~f~~~~Cp~C~~~~P~l~~~~~~~~~~~y~vdvd~~~~~~~~~~~~~~~~~~~~~i~~~i~~~PT~v~~k~Gk~v 103 (122)
T TIGR01295 29 FIGRKTCPYCRKFSGTLSGVVAQTKAPIYYIDSENNGSFEMSSLNDLTAFRSRFGIPTSFMGTPTFVHITDGKQV 103 (122)
T ss_pred EEECCCChhHHHHhHHHHHHHHhcCCcEEEEECCCccCcCcccHHHHHHHHHHcCCcccCCCCCEEEEEeCCeEE
Confidence 468999999998655554 3445555555543211 1111 1333322 234499997 566433
No 173
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=70.27 E-value=11 Score=34.97 Aligned_cols=57 Identities=9% Similarity=0.027 Sum_probs=36.4
Q ss_pred CeeecCCCChhHHHHHH----HHHhc-CCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEee
Q 024495 1 MQLYHHPYSLDSQKVRL----ALEEK-NIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIF 63 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~----~L~~~-gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~ 63 (267)
+++|..+.||+|-.+.- +..+. +|..+.+.+.. -++..+.-.-..||.++.||.++.
T Consensus 480 i~v~~~~~C~~Cp~~~~~~~~~~~~~~~i~~~~i~~~~------~~~~~~~~~v~~vP~~~i~~~~~~ 541 (555)
T TIGR03143 480 IKIGVSLSCTLCPDVVLAAQRIASLNPNVEAEMIDVSH------FPDLKDEYGIMSVPAIVVDDQQVY 541 (555)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHhCCCceEEEEECcc------cHHHHHhCCceecCEEEECCEEEE
Confidence 46788899998886555 33444 67766665543 244443344567999997775443
No 174
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=70.05 E-value=3.2 Score=38.03 Aligned_cols=60 Identities=10% Similarity=0.032 Sum_probs=38.6
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCc---eEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeec
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNID---YTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFN 64 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~---~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~e 64 (267)
+++|..+.||||-.+.-+++..-+. .+...+|-. .-+++...-....||.+..+|..+.+
T Consensus 121 i~~f~~~~Cp~Cp~~v~~~~~~a~~~p~i~~~~id~~----~~~~~~~~~~v~~VP~~~i~~~~~~~ 183 (515)
T TIGR03140 121 FETYVSLTCQNCPDVVQALNQMALLNPNISHTMIDGA----LFQDEVEALGIQGVPAVFLNGEEFHN 183 (515)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEch----hCHHHHHhcCCcccCEEEECCcEEEe
Confidence 4789999999999888777665553 333333422 23444444446689999977655554
No 175
>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD. It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.
Probab=68.31 E-value=12 Score=25.60 Aligned_cols=54 Identities=7% Similarity=-0.012 Sum_probs=31.4
Q ss_pred eeecCCCChhHHHHHHHH--------HhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEE
Q 024495 2 QLYHHPYSLDSQKVRLAL--------EEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK 56 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L--------~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~ 56 (267)
..|+.++|+.|+...-.+ ...+ .+....+|....+.....+.+...-..+|++.
T Consensus 16 v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~~~i~~~Pti~ 77 (104)
T cd02953 16 VDFTADWCVTCKVNEKVVFSDPEVQAALKK-DVVLLRADWTKNDPEITALLKRFGVFGPPTYL 77 (104)
T ss_pred EEEEcchhHHHHHHHHHhcCCHHHHHHHhC-CeEEEEEecCCCCHHHHHHHHHcCCCCCCEEE
Confidence 357889999999876433 2232 45666666543222223444444456689876
No 176
>COG3019 Predicted metal-binding protein [General function prediction only]
Probab=65.67 E-value=9.3 Score=28.15 Aligned_cols=70 Identities=9% Similarity=0.109 Sum_probs=47.1
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhh-hC-C--CCcccEEEeCCEEeec---hHHHHHHHH
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFR-MN-P--RAKLPVLKNGAHIIFN---TIEIIQYIE 73 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~-~~-p--~~~vP~L~~~~~~l~e---S~aI~~yL~ 73 (267)
|..|+.|.|.+|...--.|+.+|...+.+..+.. ...++ ++ | ....=+.+.+|..+-. ..+|.+.|+
T Consensus 28 ~~vyksPnCGCC~~w~~~mk~~Gf~Vk~~~~~d~------~alK~~~gIp~e~~SCHT~VI~Gy~vEGHVPa~aI~~ll~ 101 (149)
T COG3019 28 MVVYKSPNCGCCDEWAQHMKANGFEVKVVETDDF------LALKRRLGIPYEMQSCHTAVINGYYVEGHVPAEAIARLLA 101 (149)
T ss_pred EEEEeCCCCccHHHHHHHHHhCCcEEEEeecCcH------HHHHHhcCCChhhccccEEEEcCEEEeccCCHHHHHHHHh
Confidence 5689999999999999999999988887765531 11111 11 1 2233466667755543 378999998
Q ss_pred Hhc
Q 024495 74 RIS 76 (267)
Q Consensus 74 ~~~ 76 (267)
+..
T Consensus 102 ~~p 104 (149)
T COG3019 102 EKP 104 (149)
T ss_pred CCC
Confidence 765
No 177
>cd02975 PfPDO_like_N Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)-like family, N-terminal TRX-fold subdomain; composed of proteins with similarity to PfPDO, a redox active thermostable protein believed to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI), which are both involved in oxidative protein folding. PfPDO contains two redox active CXXC motifs in two contiguous TRX-fold subdomains. The active site in the N-terminal TRX-fold subdomain is required for isomerase but not for reductase activity of PfPDO. The exclusive presence of PfPDO-like proteins in extremophiles may suggest that they have a special role in adaptation to extreme conditions.
Probab=61.31 E-value=26 Score=24.69 Aligned_cols=49 Identities=10% Similarity=-0.122 Sum_probs=30.2
Q ss_pred ecCCCChhHHHHHHHHHhcCCc---eEEEEeCCCCCCCcchhhhhhCCCCcccEEE
Q 024495 4 YHHPYSLDSQKVRLALEEKNID---YTSYHVNPITGKNMDTSFFRMNPRAKLPVLK 56 (267)
Q Consensus 4 y~~~~s~~~~~vr~~L~~~gi~---~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~ 56 (267)
++.++|++|+.++-.|.+..-. .+...++... .++....-.-..+|++.
T Consensus 29 f~a~wC~~C~~~~~~l~~la~~~~~i~~~~vd~d~----~~~l~~~~~v~~vPt~~ 80 (113)
T cd02975 29 SSKEGCQYCEVTKQLLEELSELSDKLKLEIYDFDE----DKEKAEKYGVERVPTTI 80 (113)
T ss_pred eCCCCCCChHHHHHHHHHHHHhcCceEEEEEeCCc----CHHHHHHcCCCcCCEEE
Confidence 3678999999887777644321 2344445432 34455444567799987
No 178
>cd02989 Phd_like_TxnDC9 Phosducin (Phd)-like family, Thioredoxin (TRX) domain containing protein 9 (TxnDC9) subfamily; composed of predominantly uncharacterized eukaryotic proteins, containing a TRX-like domain without the redox active CXXC motif. The gene name for the human protein is TxnDC9. The two characterized members are described as Phd-like proteins, PLP1 of Saccharomyces cerevisiae and PhLP3 of Dictyostelium discoideum. Gene disruption experiments show that both PLP1 and PhLP3 are non-essential proteins. Unlike Phd and most Phd-like proteins, members of this group do not contain the Phd N-terminal helical domain which is implicated in binding to the G protein betagamma subunit.
Probab=60.62 E-value=47 Score=23.36 Aligned_cols=57 Identities=14% Similarity=0.079 Sum_probs=36.2
Q ss_pred eeecCCCChhHHHHHHHHHh-----cCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEE--eCCEEeec
Q 024495 2 QLYHHPYSLDSQKVRLALEE-----KNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK--NGAHIIFN 64 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L~~-----~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~l~e 64 (267)
-.|+.++|+-|+.+.-.+.+ .++ ....+|... .++..+...-..+|++. .+|..+..
T Consensus 27 V~f~a~~c~~C~~~~p~l~~la~~~~~i--~f~~Vd~~~----~~~l~~~~~v~~vPt~l~fk~G~~v~~ 90 (113)
T cd02989 27 CHFYHPEFFRCKIMDKHLEILAKKHLET--KFIKVNAEK----APFLVEKLNIKVLPTVILFKNGKTVDR 90 (113)
T ss_pred EEEECCCCccHHHHHHHHHHHHHHcCCC--EEEEEEccc----CHHHHHHCCCccCCEEEEEECCEEEEE
Confidence 35788999999977766644 334 445566533 33344444556799887 57766653
No 179
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=57.31 E-value=5.4 Score=28.62 Aligned_cols=26 Identities=23% Similarity=0.387 Sum_probs=13.0
Q ss_pred ccEEE--eCCEEeechHHHHHHHHHhcC
Q 024495 52 LPVLK--NGAHIIFNTIEIIQYIERISV 77 (267)
Q Consensus 52 vP~L~--~~~~~l~eS~aI~~yL~~~~~ 77 (267)
-|-|. .+|..+.|+.||++|+..-|.
T Consensus 36 ~~~L~~~~~gF~L~e~NAIvrYl~nDF~ 63 (122)
T PF09635_consen 36 GPLLKDKKSGFELFEPNAIVRYLANDFE 63 (122)
T ss_dssp S--EEE-S--S----HHHHHHHHTT--T
T ss_pred cceeeecCCceEEecccHHHHHHHhhcC
Confidence 47785 467999999999999977663
No 180
>cd02963 TRX_DnaJ TRX domain, DnaJ domain containing protein family; composed of uncharacterized proteins of about 500-800 amino acids, containing an N-terminal DnaJ domain followed by one redox active TRX domain. DnaJ is a member of the 40 kDa heat-shock protein (Hsp40) family of molecular chaperones, which regulate the activity of Hsp70s. TRX is involved in the redox regulation of many protein substrates through the reduction of disulfide bonds. TRX has been implicated to catalyse the reduction of Hsp33, a chaperone holdase that binds to unfolded protein intermediates. The presence of DnaJ and TRX domains in members of this family suggests that they could be involved in a redox-regulated chaperone network.
Probab=56.50 E-value=65 Score=22.40 Aligned_cols=56 Identities=9% Similarity=0.078 Sum_probs=30.9
Q ss_pred eeecCCCChhHHHHHHHH-----HhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEE--eCCEE
Q 024495 2 QLYHHPYSLDSQKVRLAL-----EEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK--NGAHI 61 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L-----~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~ 61 (267)
..|+.++|+.|+...-.+ ...+..+....++... .+.......-..+|++. .+|..
T Consensus 29 V~F~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~d~----~~~l~~~~~V~~~Pt~~i~~~g~~ 91 (111)
T cd02963 29 IKITSDWCFSCIHIEPVWKEVIQELEPLGVGIATVNAGH----ERRLARKLGAHSVPAIVGIINGQV 91 (111)
T ss_pred EEEECCccHhHHHhhHHHHHHHHHHHhcCceEEEEeccc----cHHHHHHcCCccCCEEEEEECCEE
Confidence 357889999997554333 2223234445555532 23333334456789886 56543
No 181
>PTZ00051 thioredoxin; Provisional
Probab=56.08 E-value=53 Score=21.88 Aligned_cols=56 Identities=9% Similarity=0.060 Sum_probs=31.6
Q ss_pred eeecCCCChhHHHHHHHHHhc---CCceEEEEeCCCCCCCcchhhhhhCCCCcccEEE--eCCEE
Q 024495 2 QLYHHPYSLDSQKVRLALEEK---NIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK--NGAHI 61 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L~~~---gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~ 61 (267)
-.|+.++|+.|+...-.+... .-.+....++... ...+.+...-..+|++. .+|..
T Consensus 23 i~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~vd~~~----~~~~~~~~~v~~~Pt~~~~~~g~~ 83 (98)
T PTZ00051 23 VDFYAEWCGPCKRIAPFYEECSKEYTKMVFVKVDVDE----LSEVAEKENITSMPTFKVFKNGSV 83 (98)
T ss_pred EEEECCCCHHHHHHhHHHHHHHHHcCCcEEEEEECcc----hHHHHHHCCCceeeEEEEEeCCeE
Confidence 357889999999776655442 1123444455432 23344444456789876 45533
No 182
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=55.52 E-value=7.6 Score=31.19 Aligned_cols=59 Identities=12% Similarity=0.231 Sum_probs=42.3
Q ss_pred HHHHHHHHHHccCCceeccCCCchhHHHHHHHHHHHhhcCCcchhhcCCCcHHHHHHHHhcCchHH
Q 024495 170 VRLLDEVETKLNDTAYLAGEEFTMADVMLIPVFSRLKLLDLEDEYISCRPNIAEYWVLMQQRPSYK 235 (267)
Q Consensus 170 ~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~ 235 (267)
...+..++..|.+++|.-|..++-+|+.++..+.- .+-...+++..+|+..+.+..+..
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~~-------ep~s~~~v~~~~w~~~l~a~~~~~ 68 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALGV-------EPQSARLVNAERWYSKLEALLRLL 68 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhccc-------CcchhhhhHHHHHHHHHHHHHHHH
Confidence 45678899999999999999999999988855421 111344567778887776654443
No 183
>cd02984 TRX_PICOT TRX domain, PICOT (for PKC-interacting cousin of TRX) subfamily; PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT contains an N-terminal TRX-like domain, which does not contain the catalytic CXXC motif, followed by one to three glutaredoxin domains. The TRX-like domain is required for interaction with PKC theta. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli.
Probab=48.74 E-value=77 Score=20.96 Aligned_cols=57 Identities=9% Similarity=0.116 Sum_probs=33.8
Q ss_pred eeecCCCChhHHHHHHHHHh---c-CCceEEEEeCCCCCCCcchhhhhhCCCCcccEEE--eCCEEe
Q 024495 2 QLYHHPYSLDSQKVRLALEE---K-NIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK--NGAHII 62 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L~~---~-gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~l 62 (267)
-.|+.++|+.|++..-.|.. . +-.+....+|... .++..+.-.-..+|++. .+|..+
T Consensus 19 v~f~~~~C~~C~~~~~~l~~l~~~~~~~i~~~~vd~~~----~~~~~~~~~i~~~Pt~~~~~~g~~~ 81 (97)
T cd02984 19 LHFWAPWAEPCKQMNQVFEELAKEAFPSVLFLSIEAEE----LPEISEKFEITAVPTFVFFRNGTIV 81 (97)
T ss_pred EEEECCCCHHHHHHhHHHHHHHHHhCCceEEEEEcccc----CHHHHHhcCCccccEEEEEECCEEE
Confidence 45788999999988776654 2 3345555566432 23333333345699886 566443
No 184
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=45.16 E-value=45 Score=26.52 Aligned_cols=52 Identities=6% Similarity=0.028 Sum_probs=32.2
Q ss_pred eeecCCCChhHHHHHHHHHhcCC---ceEEEEeCCCCCCCcchhhhhhCCCCcccEEEe
Q 024495 2 QLYHHPYSLDSQKVRLALEEKNI---DYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKN 57 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L~~~gi---~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~ 57 (267)
.+|+.++||+|..+..++...-- ..+...+|... .++......-..+|++..
T Consensus 138 ~~F~a~~C~~C~~~~~~l~~l~~~~~~i~~~~vD~~~----~~~~~~~~~V~~vPtl~i 192 (215)
T TIGR02187 138 EVFVTPTCPYCPYAVLMAHKFALANDKILGEMIEANE----NPDLAEKYGVMSVPKIVI 192 (215)
T ss_pred EEEECCCCCCcHHHHHHHHHHHHhcCceEEEEEeCCC----CHHHHHHhCCccCCEEEE
Confidence 56899999999988877764321 23333455432 344444444556999983
No 185
>TIGR02681 phage_pRha phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein.
Probab=43.70 E-value=26 Score=24.68 Aligned_cols=26 Identities=8% Similarity=0.246 Sum_probs=21.5
Q ss_pred ccEEE-eCCEEeechHHHHHHHHHhcC
Q 024495 52 LPVLK-NGAHIIFNTIEIIQYIERISV 77 (267)
Q Consensus 52 vP~L~-~~~~~l~eS~aI~~yL~~~~~ 77 (267)
.|.+. .+|.++++|..|+++.++.|.
T Consensus 2 ~~~v~~~~~~~~ttS~~IAe~fgK~H~ 28 (108)
T TIGR02681 2 FPKVFTKRNQVVTDSLTMAQMFGKRHD 28 (108)
T ss_pred CceEEEECCEEEEeHHHHHHHHCcchH
Confidence 35554 789999999999999998774
No 186
>PF04134 DUF393: Protein of unknown function, DUF393; InterPro: IPR007263 The DCC family, named after the conserved N-terminal DxxCxxC motif, encompasses COG3011 from COG. Proteins in this family are predicted to have a thioredoxin-like fold which, together with the presence of an invariant catalytic cysteine residue, suggests that they are a novel group of thiol-disulphide oxidoreductases []. As some of the bacterial proteins are encoded near penicillin-binding proteins, it has been suggested that these may be involved in redox regulation of cell wall biosynthesis [].
Probab=41.77 E-value=1e+02 Score=21.46 Aligned_cols=72 Identities=6% Similarity=0.101 Sum_probs=40.3
Q ss_pred eecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcc-hhhhhhC---CCCcccEEEeCC-EEeechHHHHHHHHHh
Q 024495 3 LYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMD-TSFFRMN---PRAKLPVLKNGA-HIIFNTIEIIQYIERI 75 (267)
Q Consensus 3 Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~-~~~~~~~---p~~~vP~L~~~~-~~l~eS~aI~~yL~~~ 75 (267)
|+|-..||+|....-.+...+-.=....++....+... .....++ ....+-+ ..+| ....++.|+.+-+...
T Consensus 1 v~YDg~C~lC~~~~~~l~~~d~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~g~~~~~G~~A~~~l~~~~ 77 (114)
T PF04134_consen 1 VFYDGDCPLCRREVRFLRRRDRGGRLRFVDIQSEPDQALLASYGISPEDADSRLHL-IDDGERVYRGSDAVLRLLRRL 77 (114)
T ss_pred CEECCCCHhHHHHHHHHHhcCCCCCEEEEECCChhhhhHHHhcCcCHHHHcCeeEE-ecCCCEEEEcHHHHHHHHHHc
Confidence 46777899999888777777653333333432111111 1112222 2333434 5455 4999999998887654
No 187
>cd02955 SSP411 TRX domain, SSP411 protein family; members of this family are highly conserved proteins present in eukaryotes, bacteria and archaea, about 600-800 amino acids in length, which contain a TRX domain with a redox active CXXC motif. The human/rat protein, called SSP411, is specifically expressed in the testis in an age-dependent manner. The SSP411 mRNA is increased during spermiogenesis and is localized in round and elongated spermatids, suggesting a function in fertility regulation.
Probab=39.57 E-value=1.1e+02 Score=22.05 Aligned_cols=63 Identities=11% Similarity=0.141 Sum_probs=36.2
Q ss_pred eecCCCChhHHHHHH-HHHh------cCCceEEEEeCCCCCCCcchhhhh----hCCCCcccEEE---eCCEEeech
Q 024495 3 LYHHPYSLDSQKVRL-ALEE------KNIDYTSYHVNPITGKNMDTSFFR----MNPRAKLPVLK---NGAHIIFNT 65 (267)
Q Consensus 3 Ly~~~~s~~~~~vr~-~L~~------~gi~~~~~~v~~~~~~~~~~~~~~----~~p~~~vP~L~---~~~~~l~eS 65 (267)
.++..+|++|++..- .+.. .+=.|..+.+|..........+.+ ....+.+|+++ .+|..+..+
T Consensus 21 ~f~a~WC~~Ck~me~~~f~~~~V~~~l~~~fv~VkvD~~~~~~~~~~~~~~~~~~~~~~G~Pt~vfl~~~G~~~~~~ 97 (124)
T cd02955 21 SIGYSTCHWCHVMEHESFEDEEVAAILNENFVPIKVDREERPDVDKIYMNAAQAMTGQGGWPLNVFLTPDLKPFFGG 97 (124)
T ss_pred EEccCCCHhHHHHHHHccCCHHHHHHHhCCEEEEEEeCCcCcHHHHHHHHHHHHhcCCCCCCEEEEECCCCCEEeee
Confidence 367889999997742 2222 233688888887543222111221 22345688876 467777765
No 188
>PHA02278 thioredoxin-like protein
Probab=39.49 E-value=1.3e+02 Score=20.82 Aligned_cols=61 Identities=8% Similarity=0.038 Sum_probs=31.1
Q ss_pred eecCCCChhHHHHHHHHHhc----CCceEEEEeCCCCCCCcchhhhhhCCCCcccEEE--eCCEEee
Q 024495 3 LYHHPYSLDSQKVRLALEEK----NIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK--NGAHIIF 63 (267)
Q Consensus 3 Ly~~~~s~~~~~vr~~L~~~----gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~l~ 63 (267)
-|+.++|+.|+...=.+... +.......++....+...++.....--..+|++. .+|..+.
T Consensus 20 ~F~A~WCgpCk~m~p~l~~l~~~~~~~~~~~~vdvd~~~~d~~~l~~~~~I~~iPT~i~fk~G~~v~ 86 (103)
T PHA02278 20 MITQDNCGKCEILKSVIPMFQESGDIKKPILTLNLDAEDVDREKAVKLFDIMSTPVLIGYKDGQLVK 86 (103)
T ss_pred EEECCCCHHHHhHHHHHHHHHhhhcCCceEEEEECCccccccHHHHHHCCCccccEEEEEECCEEEE
Confidence 36888999998666544332 1222334444432111113333333345689887 5665543
No 189
>cd02959 ERp19 Endoplasmic reticulum protein 19 (ERp19) family; ERp19 is also known as ERp18, a protein located in the ER containing one redox active TRX domain. Denaturation studies indicate that the reduced form is more stable than the oxidized form, suggesting that the protein is involved in disulfide bond formation. In vitro, ERp19 has been shown to possess thiol-disulfide oxidase activity which is dependent on the presence of both active site cysteines. Although described as protein disulfide isomerase (PDI)-like, the protein does not complement for PDI activity. ERp19 shows a wide tissue distribution but is most abundant in liver, testis, heart and kidney.
Probab=38.08 E-value=1.1e+02 Score=21.70 Aligned_cols=57 Identities=9% Similarity=0.184 Sum_probs=30.8
Q ss_pred eecCCCChhHHHHHHHHHh------cCCceEEEEeCCCCCCCcchhhhhhCCCC-cccEEE--e-CCEEee
Q 024495 3 LYHHPYSLDSQKVRLALEE------KNIDYTSYHVNPITGKNMDTSFFRMNPRA-KLPVLK--N-GAHIIF 63 (267)
Q Consensus 3 Ly~~~~s~~~~~vr~~L~~------~gi~~~~~~v~~~~~~~~~~~~~~~~p~~-~vP~L~--~-~~~~l~ 63 (267)
-|+.++|+.|+...-.+.. .+..|..+.++-. +. +.-...+..| .+|++. + +|..+.
T Consensus 25 ~F~a~WC~~C~~~~~~~~~~~~~~~~~~~fv~v~vd~~--~~--~~~~~~~~~g~~vPt~~f~~~~Gk~~~ 91 (117)
T cd02959 25 LIHKTWCGACKALKPKFAESKEISELSHNFVMVNLEDD--EE--PKDEEFSPDGGYIPRILFLDPSGDVHP 91 (117)
T ss_pred EEeCCcCHHHHHHHHHHhhhHHHHhhcCcEEEEEecCC--CC--chhhhcccCCCccceEEEECCCCCCch
Confidence 4678899999987655554 2234555444432 11 1112334443 499886 3 555544
No 190
>TIGR01068 thioredoxin thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model.
Probab=36.39 E-value=1.2e+02 Score=19.82 Aligned_cols=54 Identities=13% Similarity=0.098 Sum_probs=30.6
Q ss_pred eecCCCChhHHHHHHHHHhc----CCceEEEEeCCCCCCCcchhhhhhCCCCcccEEE--eCCE
Q 024495 3 LYHHPYSLDSQKVRLALEEK----NIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK--NGAH 60 (267)
Q Consensus 3 Ly~~~~s~~~~~vr~~L~~~----gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~ 60 (267)
.|+.++|+.|+...-.+... +-.+....+|... .+.+.+...-..+|++. .+|.
T Consensus 20 ~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~----~~~~~~~~~v~~~P~~~~~~~g~ 79 (101)
T TIGR01068 20 DFWAPWCGPCKMIAPILEELAKEYEGKVKFVKLNVDE----NPDIAAKYGIRSIPTLLLFKNGK 79 (101)
T ss_pred EEECCCCHHHHHhCHHHHHHHHHhcCCeEEEEEECCC----CHHHHHHcCCCcCCEEEEEeCCc
Confidence 56788899998776555432 2135555566532 23333333345689876 4553
No 191
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=36.07 E-value=58 Score=27.08 Aligned_cols=61 Identities=18% Similarity=0.143 Sum_probs=44.4
Q ss_pred hHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhC----CCCcccEEEeCCEEeechHHHHHHHH
Q 024495 11 DSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMN----PRAKLPVLKNGAHIIFNTIEIIQYIE 73 (267)
Q Consensus 11 ~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~----p~~~vP~L~~~~~~l~eS~aI~~yL~ 73 (267)
-|..||.+|+-.+|-|++..|.|..+ . ..++..+- -...+|.+-.+|..|.....|.+--+
T Consensus 149 ~C~~VR~ilesf~V~v~ERDVSMd~~-f-r~EL~~~lg~~~~~~~LPrVFV~GryIGgaeeV~~LnE 213 (281)
T KOG2824|consen 149 DCNAVRAILESFRVKVDERDVSMDSE-F-REELQELLGEDEKAVSLPRVFVKGRYIGGAEEVVRLNE 213 (281)
T ss_pred HHHHHHHHHHhCceEEEEecccccHH-H-HHHHHHHHhcccccCccCeEEEccEEeccHHHhhhhhh
Confidence 46789999999999999999998642 1 12222221 24568977799999999888877644
No 192
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=34.19 E-value=1.5e+02 Score=23.53 Aligned_cols=55 Identities=11% Similarity=0.117 Sum_probs=31.4
Q ss_pred eeecC---CCChhHHHHHHHHHhc-----CCceEEEEeCCCCCCCcchhhhhhCCCCcccEEE--eCCE
Q 024495 2 QLYHH---PYSLDSQKVRLALEEK-----NIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK--NGAH 60 (267)
Q Consensus 2 ~Ly~~---~~s~~~~~vr~~L~~~-----gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~ 60 (267)
.+|.. ++||.|..+.-.+++. ++.+....++... .++.....--..+|++. .+|.
T Consensus 24 ~~f~~~~a~wC~~C~~~~p~l~~la~~~~~~~i~~v~vd~~~----~~~l~~~~~V~~~Pt~~~f~~g~ 88 (215)
T TIGR02187 24 VVFTDNDKEGCQYCKETEQLLEELSEVSPKLKLEIYDFDTPE----DKEEAEKYGVERVPTTIILEEGK 88 (215)
T ss_pred EEEcCCCCCCCCchHHHHHHHHHHHhhCCCceEEEEecCCcc----cHHHHHHcCCCccCEEEEEeCCe
Confidence 46666 8899999777766544 2334444444322 23333333455689887 4543
No 193
>PRK09381 trxA thioredoxin; Provisional
Probab=33.61 E-value=1.6e+02 Score=20.09 Aligned_cols=56 Identities=11% Similarity=0.035 Sum_probs=32.0
Q ss_pred eecCCCChhHHHHHHHHHh----cCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEE--eCCEEe
Q 024495 3 LYHHPYSLDSQKVRLALEE----KNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK--NGAHII 62 (267)
Q Consensus 3 Ly~~~~s~~~~~vr~~L~~----~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~l 62 (267)
.|+.++||.|+...-.+.. .+-.+....++.... +.......-..+|++. .+|..+
T Consensus 27 ~f~~~~C~~C~~~~p~~~~l~~~~~~~~~~~~vd~~~~----~~~~~~~~v~~~Pt~~~~~~G~~~ 88 (109)
T PRK09381 27 DFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQN----PGTAPKYGIRGIPTLLLFKNGEVA 88 (109)
T ss_pred EEECCCCHHHHHHhHHHHHHHHHhCCCcEEEEEECCCC----hhHHHhCCCCcCCEEEEEeCCeEE
Confidence 5688899999977644432 211345555665432 2333333456799886 566544
No 194
>PF10653 Phage-A118_gp45: Protein gp45 of Bacteriophage A118; InterPro: IPR018915 The proteins in this entry represents Gp45 in Listeria phage A118 (Bacteriophage A118) and related proteins; Gp45 is thought to have a function in the phage tail-fibre system.
Probab=31.99 E-value=49 Score=19.65 Aligned_cols=31 Identities=16% Similarity=0.188 Sum_probs=24.1
Q ss_pred HHHhcCchHHHhhhcccccHHHHHHHHHhhh
Q 024495 226 VLMQQRPSYKMVIGNYFDGWRKYKTLLKTWC 256 (267)
Q Consensus 226 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 256 (267)
..|.+.|+|+..+.-...+++++.+++.+..
T Consensus 23 tkmianpaf~qkiplietgcekm~dyieelk 53 (62)
T PF10653_consen 23 TKMIANPAFQQKIPLIETGCEKMTDYIEELK 53 (62)
T ss_pred HHHhcCHHHHhccchhhhhhHHHHHHHHHHh
Confidence 3577889998888877788888888776654
No 195
>TIGR01764 excise DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376).
Probab=30.43 E-value=86 Score=17.49 Aligned_cols=25 Identities=24% Similarity=0.511 Sum_probs=20.5
Q ss_pred CCcccEEEeCCEEeechHHHHHHHH
Q 024495 49 RAKLPVLKNGAHIIFNTIEIIQYIE 73 (267)
Q Consensus 49 ~~~vP~L~~~~~~l~eS~aI~~yL~ 73 (267)
.|.+|....|+..+....+|.+|++
T Consensus 24 ~g~i~~~~~g~~~~~~~~~l~~~~~ 48 (49)
T TIGR01764 24 EGELPAYRVGRHYRIPREDVDEYLE 48 (49)
T ss_pred cCCCCeEEeCCeEEEeHHHHHHHHh
Confidence 5678887777888899899988876
No 196
>PRK09266 hypothetical protein; Provisional
Probab=29.83 E-value=70 Score=26.37 Aligned_cols=59 Identities=14% Similarity=0.068 Sum_probs=40.5
Q ss_pred HHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEeCCEEeechHHHHHHHHHhc
Q 024495 18 ALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKNGAHIIFNTIEIIQYIERIS 76 (267)
Q Consensus 18 ~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~yL~~~~ 76 (267)
.+...|+++++..+.+..-...++.|.--+-.|-+||-..++..+.+...|.+.|.+.+
T Consensus 200 ~~~~~g~~v~e~~i~~~eL~~adevfltnSl~gi~pV~~i~~~~~~~~~~~~~~l~~~~ 258 (266)
T PRK09266 200 GLERLGIPQRTRPVTLADLGRFAGAFACNAWRGQRAVSAIDDVALPDSHALLELLRRAY 258 (266)
T ss_pred HHHHcCCeeEEEECCHHHHHHhhHhhhhcCccceEEEEEECCEECCCCchHHHHHHHHH
Confidence 45667999998888764322234445544557889999988887765567777776655
No 197
>PF09413 DUF2007: Domain of unknown function (DUF2007); InterPro: IPR018551 This is a family of proteins with unknown function. ; PDB: 2HFV_A.
Probab=29.71 E-value=43 Score=20.88 Aligned_cols=31 Identities=19% Similarity=0.252 Sum_probs=20.0
Q ss_pred eeecCCCChhHHHHHHHHHhcCCceEEEEeC
Q 024495 2 QLYHHPYSLDSQKVRLALEEKNIDYTSYHVN 32 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~ 32 (267)
+||.+....-+..++-+|+..||++....-.
T Consensus 2 ~l~~~~~~~ea~~i~~~L~~~gI~~~v~~~~ 32 (67)
T PF09413_consen 2 KLYTAGDPIEAELIKGLLEENGIPAFVKNEH 32 (67)
T ss_dssp EEEEE--HHHHHHHHHHHHHTT--EE--S--
T ss_pred EEEEcCCHHHHHHHHHHHHhCCCcEEEECCc
Confidence 6777777778999999999999999886443
No 198
>cd02962 TMX2 TMX2 family; composed of proteins similar to human TMX2, a 372-amino acid TRX-related transmembrane protein, identified and characterized through the cloning of its cDNA from a human fetal library. It contains a TRX domain but the redox active CXXC motif is replaced with SXXC. Sequence analysis predicts that TMX2 may be a Type I membrane protein, with its C-terminal half protruding on the luminal side of the endoplasmic reticulum (ER). In addition to the TRX domain, transmembrane region and ER-retention signal, TMX2 also contains a Myb DNA-binding domain repeat signature and a dileucine motif in the tail.
Probab=29.65 E-value=2.4e+02 Score=21.11 Aligned_cols=57 Identities=11% Similarity=0.106 Sum_probs=32.3
Q ss_pred eecCCCChhHHHHHHHHHh-----cCCceEEEEeCCCCCCCcchhhhhh-CC-----CCcccEEE--eCCEEee
Q 024495 3 LYHHPYSLDSQKVRLALEE-----KNIDYTSYHVNPITGKNMDTSFFRM-NP-----RAKLPVLK--NGAHIIF 63 (267)
Q Consensus 3 Ly~~~~s~~~~~vr~~L~~-----~gi~~~~~~v~~~~~~~~~~~~~~~-~p-----~~~vP~L~--~~~~~l~ 63 (267)
.|+.++|+.|+...-.+.. .+-.++...+|.... ++..+. +- -.++|++. .+|..+.
T Consensus 53 ~Fya~wC~~Ck~l~p~l~~la~~~~~~~v~f~~VDvd~~----~~la~~~~V~~~~~v~~~PT~ilf~~Gk~v~ 122 (152)
T cd02962 53 EFFTTWSPECVNFAPVFAELSLKYNNNNLKFGKIDIGRF----PNVAEKFRVSTSPLSKQLPTIILFQGGKEVA 122 (152)
T ss_pred EEECCCCHHHHHHHHHHHHHHHHcccCCeEEEEEECCCC----HHHHHHcCceecCCcCCCCEEEEEECCEEEE
Confidence 5788899999876654432 222355566666432 222221 21 13489887 6776655
No 199
>cd02997 PDI_a_PDIR PDIa family, PDIR subfamily; composed of proteins similar to human PDIR (for Protein Disulfide Isomerase Related). PDIR is composed of three redox active TRX (a) domains and an N-terminal redox inactive TRX-like (b) domain. Similar to PDI, it is involved in oxidative protein folding in the endoplasmic reticulum (ER) through its isomerase and chaperone activities. These activities are lower compared to PDI, probably due to PDIR acting only on a subset of proteins. PDIR is preferentially expressed in cells actively secreting proteins and its expression is induced by stress. Similar to PDI, the isomerase and chaperone activities of PDIR are independent; CXXC mutants lacking isomerase activity retain chaperone activity.
Probab=29.54 E-value=76 Score=21.23 Aligned_cols=53 Identities=11% Similarity=0.097 Sum_probs=27.5
Q ss_pred eeecCCCChhHHHHHHHH----HhcC--CceEEEEeCCCCCCCcchhhhhhCCCCcccEEE
Q 024495 2 QLYHHPYSLDSQKVRLAL----EEKN--IDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK 56 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L----~~~g--i~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~ 56 (267)
-+|+.++|+.|+...-.+ .... -.+....++.... ..+.+.....-..+|.++
T Consensus 22 v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~id~~~~--~~~~~~~~~~i~~~Pt~~ 80 (104)
T cd02997 22 VMFYAPWCGHCKKMKPEFTKAATELKEDGKGVLAAVDCTKP--EHDALKEEYNVKGFPTFK 80 (104)
T ss_pred EEEECCCCHHHHHhCHHHHHHHHHHhhCCceEEEEEECCCC--ccHHHHHhCCCccccEEE
Confidence 467888999999764222 2211 2244444555321 123343333345689876
No 200
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=29.51 E-value=2.2e+02 Score=20.62 Aligned_cols=66 Identities=15% Similarity=0.040 Sum_probs=38.7
Q ss_pred CCCChhHHH----HHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCC-------CcccEEE--e-CCEEeechHHHHHH
Q 024495 6 HPYSLDSQK----VRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPR-------AKLPVLK--N-GAHIIFNTIEIIQY 71 (267)
Q Consensus 6 ~~~s~~~~~----vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~-------~~vP~L~--~-~~~~l~eS~aI~~y 71 (267)
-++||.|.+ |+-+|++..-+...+.++..+. .-|--..||+ --||+|. . ....+.+...-...
T Consensus 42 qSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~r---p~Wk~p~n~FR~d~~~lt~vPTLlrw~~~~~rL~~~q~~~~~ 118 (128)
T KOG3425|consen 42 QSWCPDCVAAEPVINEALKHAPEDVHFVHVYVGNR---PYWKDPANPFRKDPGILTAVPTLLRWKRQPQRLDGLQCLNDH 118 (128)
T ss_pred CcCCchHHHhhHHHHHHHHhCCCceEEEEEEecCC---CcccCCCCccccCCCceeecceeeEEcCccccchHhHhhHHH
Confidence 357888874 5667777777777777777543 1111122332 3478887 3 34566666655555
Q ss_pred HHH
Q 024495 72 IER 74 (267)
Q Consensus 72 L~~ 74 (267)
|.+
T Consensus 119 Lve 121 (128)
T KOG3425|consen 119 LVE 121 (128)
T ss_pred HHH
Confidence 543
No 201
>cd02948 TRX_NDPK TRX domain, TRX and NDP-kinase (NDPK) fusion protein family; most members of this group are fusion proteins which contain one redox active TRX domain containing a CXXC motif and three NDPK domains, and are characterized as intermediate chains (ICs) of axonemal outer arm dynein. Dyneins are molecular motors that generate force against microtubules to produce cellular movement, and are divided into two classes: axonemal and cytoplasmic. They are supramolecular complexes consisting of three protein groups classified according to size: dynein heavy, intermediate and light chains. Axonemal dyneins form two structures, the inner and outer arms, which are attached to doublet microtubules throughout the cilia and flagella. The human homolog is the sperm-specific Sptrx-2, presumed to be a component of the human sperm axoneme architecture. Included in this group is another human protein, TRX-like protein 2, a smaller fusion protein containing one TRX and one NDPK domain, which
Probab=29.35 E-value=88 Score=21.26 Aligned_cols=54 Identities=4% Similarity=-0.106 Sum_probs=28.3
Q ss_pred eecCCCChhHHHHHHHHHhc----C-CceEEEEeCCCCCCCcchhhhhhCCCCcccEEE--eCCEE
Q 024495 3 LYHHPYSLDSQKVRLALEEK----N-IDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK--NGAHI 61 (267)
Q Consensus 3 Ly~~~~s~~~~~vr~~L~~~----g-i~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~ 61 (267)
.|+.++|+.|+...-.+... + -......++.. .++..+..--..+|++. .+|..
T Consensus 23 ~F~a~wC~~Ck~~~p~l~~~~~~~~~~~~~~~~vd~d-----~~~~~~~~~v~~~Pt~~~~~~g~~ 83 (102)
T cd02948 23 DVYQEWCGPCKAVVSLFKKIKNELGDDLLHFATAEAD-----TIDTLKRYRGKCEPTFLFYKNGEL 83 (102)
T ss_pred EEECCcCHhHHHHhHHHHHHHHHcCCCcEEEEEEeCC-----CHHHHHHcCCCcCcEEEEEECCEE
Confidence 57889999998766554321 1 12333444442 12233333345688776 45543
No 202
>cd02951 SoxW SoxW family; SoxW is a bacterial periplasmic TRX, containing a redox active CXXC motif, encoded by a genetic locus (sox operon) involved in thiosulfate oxidation. Sulfur bacteria oxidize sulfur compounds to provide reducing equivalents for carbon dioxide fixation during autotrophic growth and the respiratory electron transport chain. It is unclear what the role of SoxW is, since it has been found to be dispensable in the oxidation of thiosulfate to sulfate. SoxW is specifically kept in the reduced state by SoxV, which is essential in thiosulfate oxidation.
Probab=29.05 E-value=2e+02 Score=20.21 Aligned_cols=16 Identities=19% Similarity=0.285 Sum_probs=12.6
Q ss_pred eeecCCCChhHHHHHH
Q 024495 2 QLYHHPYSLDSQKVRL 17 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~ 17 (267)
..|+.++|++|++..-
T Consensus 19 v~f~a~wC~~C~~~~~ 34 (125)
T cd02951 19 LLFSQPGCPYCDKLKR 34 (125)
T ss_pred EEEeCCCCHHHHHHHH
Confidence 4578899999998753
No 203
>cd03003 PDI_a_ERdj5_N PDIa family, N-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains. This subfamily is comprised of the first TRX domain of ERdj5 located after the DnaJ domain at the N-terminal half of the protein. ERdj5 is a ubiquitous protein localized in the endoplasmic reticulum (ER) and is abundant in secretory cells. It's transcription is induced during ER stress. It interacts with BiP through its DnaJ domain in an ATP-dependent manner. BiP, an ER-resident member of the Hsp70 chaperone family, functions in ER-associated degradation and protein translocation.
Probab=28.72 E-value=1.8e+02 Score=19.40 Aligned_cols=51 Identities=16% Similarity=0.025 Sum_probs=28.5
Q ss_pred eeecCCCChhHHHHHHHHHhcCC----ceEEEEeCCCCCCCcchhhhhhCCCCcccEEE
Q 024495 2 QLYHHPYSLDSQKVRLALEEKNI----DYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK 56 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L~~~gi----~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~ 56 (267)
-.|+.++|+.|+...-.+....- .+....+|... .+...+...-..+|++.
T Consensus 23 v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~vd~~~----~~~~~~~~~v~~~Pt~~ 77 (101)
T cd03003 23 VNFYSPRCSHCHDLAPTWREFAKEMDGVIRIGAVNCGD----DRMLCRSQGVNSYPSLY 77 (101)
T ss_pred EEEECCCChHHHHhHHHHHHHHHHhcCceEEEEEeCCc----cHHHHHHcCCCccCEEE
Confidence 35788999999866555432211 24555666643 23333333345689876
No 204
>COG3433 Aryl carrier domain [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=26.91 E-value=1.8e+02 Score=18.82 Aligned_cols=41 Identities=15% Similarity=0.475 Sum_probs=29.6
Q ss_pred chhHHHHHHHHHHHhhcCCcc--hhhcCCCcHHHHHHHHhcCc
Q 024495 192 TMADVMLIPVFSRLKLLDLED--EYISCRPNIAEYWVLMQQRP 232 (267)
Q Consensus 192 t~AD~~l~~~l~~~~~~~~~~--~~~~~~p~l~~w~~~~~~~p 232 (267)
++--|-+...+.+.+..|..- ..+.+.|.|.+|++-+..+-
T Consensus 28 GLDSiR~M~L~~~wR~~G~~i~F~~La~~PTl~aW~qLl~~~~ 70 (74)
T COG3433 28 GLDSIRMMALLERWRKRGADIDFAQLAANPTLAAWWQLLSTRS 70 (74)
T ss_pred chhHHHHHHHHHHHHHcCCcccHHHHHhCccHHHHHHHHHhcc
Confidence 455566777788887776543 33678999999999887643
No 205
>cd02956 ybbN ybbN protein family; ybbN is a hypothetical protein containing a redox-inactive TRX-like domain. Its gene has been sequenced from several gammaproteobacteria and actinobacteria.
Probab=26.27 E-value=2e+02 Score=18.92 Aligned_cols=55 Identities=16% Similarity=0.084 Sum_probs=32.6
Q ss_pred eecCCCChhHHHHHHHHHhcC----CceEEEEeCCCCCCCcchhhhhhCCCCcccEEE--eCCEE
Q 024495 3 LYHHPYSLDSQKVRLALEEKN----IDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK--NGAHI 61 (267)
Q Consensus 3 Ly~~~~s~~~~~vr~~L~~~g----i~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~ 61 (267)
.|+.++|+.|+...-.+.... -.+....+|... .+.+.+.-.-..+|+++ .+|..
T Consensus 18 ~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~----~~~l~~~~~i~~~Pt~~~~~~g~~ 78 (96)
T cd02956 18 DFWAPRSPPSKELLPLLERLAEEYQGQFVLAKVNCDA----QPQIAQQFGVQALPTVYLFAAGQP 78 (96)
T ss_pred EEECCCChHHHHHHHHHHHHHHHhCCcEEEEEEeccC----CHHHHHHcCCCCCCEEEEEeCCEE
Confidence 468889999997766554322 135555666543 23444333445699887 56644
No 206
>PF11417 Inhibitor_G39P: Loader and inhibitor of phage G40P; InterPro: IPR024424 G39P inhibits the initiation of DNA replication by blocking G40P replicative helicase. G39P has a bipartite stricture consisting of a folded N-terminal domain and an unfolded C-terminal domain. The C-terminal is essential for helicase interaction [].; PDB: 1NO1_B.
Probab=23.97 E-value=2.1e+02 Score=18.43 Aligned_cols=35 Identities=14% Similarity=0.155 Sum_probs=19.1
Q ss_pred chHHHHHHHHHhcCCC--CCCCCCcccHHHHHHHHHHhh
Q 024495 64 NTIEIIQYIERISVVS--SGADDMNLSSREVVQWMHKIQ 100 (267)
Q Consensus 64 eS~aI~~yL~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 100 (267)
|..-|+.++...+|.. ...+ ...+..+.-|...+.
T Consensus 5 E~~~ll~~I~~aYP~~~~~f~~--~~~k~~v~~W~~~L~ 41 (71)
T PF11417_consen 5 ETAKLLKLIKAAYPQWAGNFKP--TDSKETVDLWYDMLK 41 (71)
T ss_dssp HHHHHHHHHHHHST---TT-----STHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCcchhccch--hhHHHHHHHHHHHHH
Confidence 5667888888888732 1111 122456777776544
No 207
>PHA03075 glutaredoxin-like protein; Provisional
Probab=23.71 E-value=1e+02 Score=22.04 Aligned_cols=65 Identities=17% Similarity=0.267 Sum_probs=45.2
Q ss_pred CeeecCCCChhHHHHHHHHHhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEEe-CCEEeechHHHHHHHHHhc
Q 024495 1 MQLYHHPYSLDSQKVRLALEEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLKN-GAHIIFNTIEIIQYIERIS 76 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~-~~~~l~eS~aI~~yL~~~~ 76 (267)
+.|++-|.|+-|+-+.-+|.+..=+|+...++... | .+-.|++=+|.. .+..+. ..+..|+...+
T Consensus 5 LILfGKP~C~vCe~~s~~l~~ledeY~ilrVNIlS-------f--FsK~g~v~~lg~d~~y~lI--nn~~~~lgne~ 70 (123)
T PHA03075 5 LILFGKPLCSVCESISEALKELEDEYDILRVNILS-------F--FSKDGQVKVLGMDKGYTLI--NNFFKHLGNEY 70 (123)
T ss_pred EEEeCCcccHHHHHHHHHHHHhhccccEEEEEeee-------e--eccCCceEEEecccceehH--HHHHHhhcccE
Confidence 36899999999999999998888899999998731 2 122456666664 333333 45667776433
No 208
>PTZ00102 disulphide isomerase; Provisional
Probab=23.02 E-value=5e+02 Score=23.23 Aligned_cols=71 Identities=13% Similarity=0.192 Sum_probs=40.9
Q ss_pred eeecCCCChhHHHHHHHH-------HhcCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEE--eCCEE--e---echHH
Q 024495 2 QLYHHPYSLDSQKVRLAL-------EEKNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK--NGAHI--I---FNTIE 67 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L-------~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~--l---~eS~a 67 (267)
..|+.++|+.|++..-.+ ...+-++....+|.... ....+...-..+|++. .+|.. . .....
T Consensus 54 v~f~a~wC~~Ck~~~p~~~~~a~~~~~~~~~i~~~~vd~~~~----~~l~~~~~i~~~Pt~~~~~~g~~~~y~g~~~~~~ 129 (477)
T PTZ00102 54 VKFYAPWCGHCKRLAPEYKKAAKMLKEKKSEIVLASVDATEE----MELAQEFGVRGYPTIKFFNKGNPVNYSGGRTADG 129 (477)
T ss_pred EEEECCCCHHHHHhhHHHHHHHHHHHhcCCcEEEEEEECCCC----HHHHHhcCCCcccEEEEEECCceEEecCCCCHHH
Confidence 467889999998664222 22334566666776432 2232222234588876 44422 1 24567
Q ss_pred HHHHHHHhc
Q 024495 68 IIQYIERIS 76 (267)
Q Consensus 68 I~~yL~~~~ 76 (267)
|..|+.+..
T Consensus 130 l~~~l~~~~ 138 (477)
T PTZ00102 130 IVSWIKKLT 138 (477)
T ss_pred HHHHHHHhh
Confidence 889998764
No 209
>cd03020 DsbA_DsbC_DsbG DsbA family, DsbC and DsbG subfamily; V-shaped homodimeric proteins containing a redox active CXXC motif imbedded in a TRX fold. They function as protein disulfide isomerases and chaperones in the bacterial periplasm to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins. DsbC and DsbG are kept in their reduced state by the cytoplasmic membrane protein DsbD, which utilizes the TRX/TRX reductase system in the cytosol as a source of reducing equivalents. DsbG differ from DsbC in that it has a more limited substrate specificity, and it may preferentially act later in the folding process to catalyze disulfide rearrangements in folded or partially folded proteins. Also included in the alignment is the predicted protein TrbB, whose gene was sequenced from the enterohemorrhagic E. coli type IV pilus gene cluster, which is required for efficient plasmid transfer.
Probab=22.24 E-value=1e+02 Score=24.04 Aligned_cols=20 Identities=15% Similarity=0.247 Sum_probs=16.9
Q ss_pred eeecCCCChhHHHHHHHHHh
Q 024495 2 QLYHHPYSLDSQKVRLALEE 21 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L~~ 21 (267)
.+|.-+.||+|++..-.+..
T Consensus 82 ~~f~D~~Cp~C~~~~~~l~~ 101 (197)
T cd03020 82 YVFTDPDCPYCRKLEKELKP 101 (197)
T ss_pred EEEECCCCccHHHHHHHHhh
Confidence 46788999999999988874
No 210
>COG5515 Uncharacterized conserved small protein [Function unknown]
Probab=21.94 E-value=84 Score=19.49 Aligned_cols=21 Identities=33% Similarity=0.393 Sum_probs=15.4
Q ss_pred CeeecC----CCChhHHHHHHHHHh
Q 024495 1 MQLYHH----PYSLDSQKVRLALEE 21 (267)
Q Consensus 1 ~~Ly~~----~~s~~~~~vr~~L~~ 21 (267)
|+||-+ ..|.||+||-.+|..
T Consensus 3 mKLYRfiTGpDDssFChrvta~LN~ 27 (70)
T COG5515 3 MKLYRFITGPDDSSFCHRVTAALNK 27 (70)
T ss_pred ceeeEeecCCchHHHHHHHHHHHhC
Confidence 567743 456799999988875
No 211
>KOG2501 consensus Thioredoxin, nucleoredoxin and related proteins [General function prediction only]
Probab=21.46 E-value=1.9e+02 Score=21.96 Aligned_cols=33 Identities=6% Similarity=0.087 Sum_probs=22.1
Q ss_pred cCCCChhHH-------HHHHHHHhcCCceEEEEeCCCCCC
Q 024495 5 HHPYSLDSQ-------KVRLALEEKNIDYTSYHVNPITGK 37 (267)
Q Consensus 5 ~~~~s~~~~-------~vr~~L~~~gi~~~~~~v~~~~~~ 37 (267)
+..+||-|+ +.--.+...+-+|+++.|.....+
T Consensus 41 sA~wC~pCR~FTP~Lk~fYe~l~~~~~~fEVvfVS~D~~~ 80 (157)
T KOG2501|consen 41 SAHWCPPCRDFTPILKDFYEELKDNAAPFEVVFVSSDRDE 80 (157)
T ss_pred EEEECCchhhCCchHHHHHHHHHhcCCceEEEEEecCCCH
Confidence 455666665 344456666778999999886643
No 212
>PF12728 HTH_17: Helix-turn-helix domain
Probab=20.93 E-value=1.8e+02 Score=16.66 Aligned_cols=26 Identities=23% Similarity=0.455 Sum_probs=21.7
Q ss_pred CCcccEEEeCCEEeechHHHHHHHHH
Q 024495 49 RAKLPVLKNGAHIIFNTIEIIQYIER 74 (267)
Q Consensus 49 ~~~vP~L~~~~~~l~eS~aI~~yL~~ 74 (267)
.|.+|.+..|+.....-.+|.+|+.+
T Consensus 24 ~g~i~~~~~g~~~~~~~~~l~~~~~~ 49 (51)
T PF12728_consen 24 QGKIPPFKIGRKWRIPKSDLDRWLER 49 (51)
T ss_pred cCCCCeEEeCCEEEEeHHHHHHHHHh
Confidence 66788888888888888999999875
No 213
>PF13098 Thioredoxin_2: Thioredoxin-like domain; PDB: 1T3B_A 2L57_A 1EEJ_B 1TJD_A 1JZD_B 1JZO_A 1G0T_B 3GV1_A 1V58_A 2H0H_A ....
Probab=20.88 E-value=75 Score=21.76 Aligned_cols=33 Identities=18% Similarity=0.300 Sum_probs=20.0
Q ss_pred eeecCCCChhHHHHHHHHHh-----cCC--ceEEEEeCCC
Q 024495 2 QLYHHPYSLDSQKVRLALEE-----KNI--DYTSYHVNPI 34 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L~~-----~gi--~~~~~~v~~~ 34 (267)
-+|+.+.||+|++..-.+.. ..+ .+..+.++..
T Consensus 10 ~~F~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 (112)
T PF13098_consen 10 VVFTDPWCPYCKKLEKELFPDNDVARYLKDDFQVIFVNID 49 (112)
T ss_dssp EEEE-TT-HHHHHHHHHHHHHHHHHCEEHCECEEEECESH
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecC
Confidence 46788999999988666552 112 4666666664
No 214
>cd02994 PDI_a_TMX PDIa family, TMX subfamily; composed of proteins similar to the TRX-related human transmembrane protein, TMX. TMX is a type I integral membrane protein; the N-terminal redox active TRX domain is present in the endoplasmic reticulum (ER) lumen while the C-terminus is oriented towards the cytoplasm. It is expressed in many cell types and its active site motif (CPAC) is unique. In vitro, TMX reduces interchain disulfides of insulin and renatures inactive RNase containing incorrect disulfide bonds. The C. elegans homolog, DPY-11, is expressed only in the hypodermis and resides in the cytoplasm. It is required for body and sensory organ morphogeneis. Another uncharacterized TRX-related transmembrane protein, human TMX4, is included in the alignment. The active site sequence of TMX4 is CPSC.
Probab=20.60 E-value=2.7e+02 Score=18.47 Aligned_cols=51 Identities=14% Similarity=0.183 Sum_probs=28.7
Q ss_pred eeecCCCChhHHHHHHHHHh-----cCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEE
Q 024495 2 QLYHHPYSLDSQKVRLALEE-----KNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK 56 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L~~-----~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~ 56 (267)
-.|+.++|+.|+...-.+.. .+..+....+|... .+...+...-..+|++.
T Consensus 21 v~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~----~~~~~~~~~i~~~Pt~~ 76 (101)
T cd02994 21 IEFYAPWCPACQQLQPEWEEFADWSDDLGINVAKVDVTQ----EPGLSGRFFVTALPTIY 76 (101)
T ss_pred EEEECCCCHHHHHHhHHHHHHHHhhccCCeEEEEEEccC----CHhHHHHcCCcccCEEE
Confidence 35788999999866544432 23344555555532 23333333345688876
No 215
>cd02972 DsbA_family DsbA family; consists of DsbA and DsbA-like proteins, including DsbC, DsbG, glutathione (GSH) S-transferase kappa (GSTK), 2-hydroxychromene-2-carboxylate (HCCA) isomerase, an oxidoreductase (FrnE) presumed to be involved in frenolicin biosynthesis, a 27-kDa outer membrane protein, and similar proteins. Members of this family contain a redox active CXXC motif (except GSTK and HCCA isomerase) imbedded in a TRX fold, and an alpha helical insert of about 75 residues (shorter in DsbC and DsbG) relative to TRX. DsbA is involved in the oxidative protein folding pathway in prokaryotes, catalyzing disulfide bond formation of proteins secreted into the bacterial periplasm. DsbC and DsbG function as protein disulfide isomerases and chaperones to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins.
Probab=20.58 E-value=1.3e+02 Score=19.33 Aligned_cols=22 Identities=14% Similarity=0.114 Sum_probs=17.6
Q ss_pred CeeecCCCChhHHHHHHHHHhc
Q 024495 1 MQLYHHPYSLDSQKVRLALEEK 22 (267)
Q Consensus 1 ~~Ly~~~~s~~~~~vr~~L~~~ 22 (267)
|.+|..+.||+|....-.+...
T Consensus 1 i~~f~d~~Cp~C~~~~~~l~~~ 22 (98)
T cd02972 1 IVEFFDPLCPYCYLFEPELEKL 22 (98)
T ss_pred CeEEECCCCHhHHhhhHHHHHH
Confidence 4678899999999887777654
No 216
>cd04911 ACT_AKiii-YclM-BS_1 ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. Bacillus subtilis YclM is reported to be a single polypeptide of 50 kD. AKIII from Bacillus subtilis strain 168 is induced by lysine and repressed by threonine and it is synergistically inhibited by lysine and threonine. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=20.40 E-value=1.2e+02 Score=19.87 Aligned_cols=22 Identities=23% Similarity=0.215 Sum_probs=19.4
Q ss_pred ChhHHHHHHHHHhcCCceEEEE
Q 024495 9 SLDSQKVRLALEEKNIDYTSYH 30 (267)
Q Consensus 9 s~~~~~vr~~L~~~gi~~~~~~ 30 (267)
-+|++|+.-+|+..||+|+..+
T Consensus 15 vGF~rk~L~I~E~~~is~Eh~P 36 (76)
T cd04911 15 VGFGRKLLSILEDNGISYEHMP 36 (76)
T ss_pred hcHHHHHHHHHHHcCCCEeeec
Confidence 3699999999999999999754
No 217
>PTZ00443 Thioredoxin domain-containing protein; Provisional
Probab=20.16 E-value=4.7e+02 Score=21.09 Aligned_cols=71 Identities=11% Similarity=0.105 Sum_probs=40.9
Q ss_pred eeecCCCChhHHHHHHHHHh-----cCCceEEEEeCCCCCCCcchhhhhhCCCCcccEEE--eCCEEe------echHHH
Q 024495 2 QLYHHPYSLDSQKVRLALEE-----KNIDYTSYHVNPITGKNMDTSFFRMNPRAKLPVLK--NGAHII------FNTIEI 68 (267)
Q Consensus 2 ~Ly~~~~s~~~~~vr~~L~~-----~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~l------~eS~aI 68 (267)
..|+.++|+.|+...-.+.. +| .+....+|... .+...+...-..+|++. ++|..+ .....|
T Consensus 57 V~FyApWC~~Ck~~~P~~e~la~~~~~-~v~~~~VD~~~----~~~l~~~~~I~~~PTl~~f~~G~~v~~~~G~~s~e~L 131 (224)
T PTZ00443 57 VKFYAPWCSHCRKMAPAWERLAKALKG-QVNVADLDATR----ALNLAKRFAIKGYPTLLLFDKGKMYQYEGGDRSTEKL 131 (224)
T ss_pred EEEECCCChHHHHHHHHHHHHHHHcCC-CeEEEEecCcc----cHHHHHHcCCCcCCEEEEEECCEEEEeeCCCCCHHHH
Confidence 35788999999866554433 22 24444455543 23333333345689876 566433 235677
Q ss_pred HHHHHHhcC
Q 024495 69 IQYIERISV 77 (267)
Q Consensus 69 ~~yL~~~~~ 77 (267)
..|+.+.+.
T Consensus 132 ~~fi~~~~~ 140 (224)
T PTZ00443 132 AAFALGDFK 140 (224)
T ss_pred HHHHHHHHH
Confidence 888877654
Done!