Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>024502
MRKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQP
CIGTGGMIPWKLHVTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGF
ETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKL
DTRGPVSKYVLPDENIRGRHVLSLHYLTLGRDDFRIFPLRWQRHKIKFGRLKCIFYLSIY
KFISNLFSVLNKSLAAVISRLQMTML

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  024502
        (266 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

DICTYBASE|DDB_G0267380 - symbol:argE "acetylornithine dea...   529  6.5e-51   1


>DICTYBASE|DDB_G0267380 [details] [associations]
            symbol:argE "acetylornithine deacetylase"
            species:44689 "Dictyostelium discoideum" [GO:0005615 "extracellular
            space" evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008152
            "metabolic process" evidence=IEA] [GO:0008777 "acetylornithine
            deacetylase activity" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0008652 "cellular amino acid biosynthetic
            process" evidence=IEA] [GO:0006526 "arginine biosynthetic process"
            evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR002933 Pfam:PF01546 PROSITE:PS00758 PROSITE:PS00759
            UniPathway:UPA00068 InterPro:IPR011650 dictyBase:DDB_G0267380
            GO:GO:0005615 GenomeReviews:CM000150_GR GO:GO:0045335 GO:GO:0046872
            EMBL:AAFI02000003 eggNOG:COG0624 Pfam:PF07687 SUPFAM:SSF55031
            GO:GO:0006526 EMBL:U23957 RefSeq:XP_647163.1
            ProteinModelPortal:P54638 STRING:P54638 SWISS-2DPAGE:P54638
            PRIDE:P54638 EnsemblProtists:DDB0191165 GeneID:8615966
            KEGG:ddi:DDB_G0267380 KO:K01438 OMA:HKAINAM GO:GO:0008777
            Uniprot:P54638
        Length = 447

 Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
 Identities = 99/190 (52%), Positives = 125/190 (65%)

Query:     3 KLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCI 62
             +L   K  LK ++ AVFI SEEN  I G+GVDAL   G +N  K GP+YW+D+AD QP I
Sbjct:   149 QLATEKPALKHSIFAVFIVSEENDEIPGIGVDALDHSGKMNPCKNGPVYWVDSADSQPTI 208

Query:    63 GTGGMIPWKLHVTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFET 122
             GTGG   W L   GK  HS +P++ +N +EL  EAL  IQ RFY DF PHPKE  Y F+ 
Sbjct:   209 GTGGAQTWNLTAHGKNMHSAMPYRTVNSVELVNEALAEIQRRFYIDFKPHPKEAEYKFDC 268

Query:   123 PSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDT 182
              STMKPT W    G  N IPGE T+ GD+RLTPFY++ ++  +++ Y+ DIN NI +L  
Sbjct:   269 SSTMKPTLWKPIAGSYNTIPGESTICGDIRLTPFYDMKEMRAKVEGYIKDINANITELRN 328

Query:   183 RGPVSKYVLP 192
             RGP SKY +P
Sbjct:   329 RGPYSKYDVP 338


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.140   0.429    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      266       266   0.00094  114 3  11 22  0.46    33
                                                     32  0.39    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  205 KB (2115 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.12u 0.18s 23.30t   Elapsed:  00:00:01
  Total cpu time:  23.12u 0.18s 23.30t   Elapsed:  00:00:01
  Start:  Fri May 10 10:16:03 2013   End:  Fri May 10 10:16:04 2013

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