Query 024502
Match_columns 266
No_of_seqs 191 out of 1735
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 09:20:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024502.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024502hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3io1_A Aminobenzoyl-glutamate 100.0 1.1E-31 3.9E-36 245.2 15.4 241 2-261 163-431 (445)
2 3ram_A HMRA protein; two-domai 100.0 6E-31 2E-35 236.9 15.2 242 2-261 107-372 (394)
3 3pfo_A Putative acetylornithin 100.0 1.2E-29 4.1E-34 230.9 17.9 247 2-262 157-428 (433)
4 1xmb_A IAA-amino acid hydrolas 100.0 2.9E-29 1E-33 227.5 17.7 242 2-261 130-401 (418)
5 1ysj_A Protein YXEP; M20 famil 100.0 2.8E-29 9.4E-34 226.7 14.5 242 2-262 136-400 (404)
6 1vgy_A Succinyl-diaminopimelat 100.0 2.7E-28 9.2E-33 219.4 18.5 246 2-262 116-378 (393)
7 3isz_A Succinyl-diaminopimelat 100.0 1.5E-27 5.3E-32 212.8 19.6 246 2-261 113-374 (377)
8 3tx8_A Succinyl-diaminopimelat 100.0 2.7E-28 9.1E-33 217.6 13.0 244 2-259 116-368 (369)
9 2f7v_A Aectylcitrulline deacet 100.0 1E-27 3.4E-32 214.0 15.4 233 11-260 121-367 (369)
10 3ct9_A Acetylornithine deacety 99.9 2.7E-27 9.2E-32 210.3 15.0 233 2-261 118-354 (356)
11 1cg2_A Carboxypeptidase G2; me 99.9 1.7E-27 5.8E-32 214.1 12.6 237 2-261 132-389 (393)
12 3n5f_A L-carbamoylase, N-carba 99.9 6.6E-27 2.3E-31 211.3 15.7 240 2-261 103-405 (408)
13 2rb7_A Peptidase, M20/M25/M40 99.9 2.3E-27 7.8E-32 211.4 10.9 231 2-262 113-359 (364)
14 3rza_A Tripeptidase; phosphory 99.9 7.1E-27 2.4E-31 210.3 12.2 235 2-262 142-392 (396)
15 3gb0_A Peptidase T; NP_980509. 99.9 6.7E-27 2.3E-31 208.8 10.7 235 2-262 121-372 (373)
16 3dlj_A Beta-Ala-His dipeptidas 99.9 1.7E-25 5.8E-30 206.4 17.0 252 2-262 156-482 (485)
17 1z2l_A Allantoate amidohydrola 99.9 2.9E-25 9.9E-30 201.4 13.0 245 2-262 107-410 (423)
18 2pok_A Peptidase, M20/M25/M40 99.9 5.7E-25 1.9E-29 202.7 14.0 253 2-261 160-480 (481)
19 3ife_A Peptidase T; metallopep 99.9 8.8E-26 3E-30 205.6 7.6 231 2-261 179-430 (434)
20 2v8h_A Beta-alanine synthase; 99.9 1.2E-24 4.2E-29 200.1 14.9 240 2-261 137-445 (474)
21 3pfe_A Succinyl-diaminopimelat 99.9 1.3E-24 4.3E-29 199.9 14.2 252 2-262 143-469 (472)
22 2zog_A Cytosolic non-specific 99.9 5.4E-24 1.9E-28 195.9 14.3 253 2-262 149-475 (479)
23 2qyv_A XAA-His dipeptidase; YP 99.9 2.5E-23 8.5E-28 192.0 13.4 225 10-261 133-484 (487)
24 1fno_A Peptidase T; metallo pe 99.9 5.9E-23 2E-27 185.9 12.4 232 2-262 153-405 (417)
25 3khx_A Putative dipeptidase sa 99.9 4.9E-23 1.7E-27 190.2 11.8 242 2-262 151-489 (492)
26 3mru_A Aminoacyl-histidine dip 99.9 7.8E-22 2.7E-26 182.1 12.5 223 9-262 135-487 (490)
27 1lfw_A PEPV; hydrolase, dipept 99.8 1.5E-20 5.3E-25 172.5 13.5 240 2-262 132-465 (470)
28 1q7l_A Aminoacylase-1; catalys 98.1 2E-07 6.9E-12 75.3 -0.8 69 2-72 126-198 (198)
29 4h2k_A Succinyl-diaminopimelat 97.9 5.1E-06 1.7E-10 70.2 2.7 55 2-58 116-170 (269)
30 3t68_A Succinyl-diaminopimelat 97.7 2.4E-05 8.1E-10 66.0 4.2 55 2-58 116-170 (268)
31 2fvg_A Endoglucanase; TM1049, 97.4 2.9E-05 9.9E-10 67.8 0.1 61 10-91 184-244 (340)
32 1rtq_A Bacterial leucyl aminop 95.1 0.0077 2.6E-07 51.3 2.0 52 2-56 130-181 (299)
33 1tkj_A Aminopeptidase, SGAP; d 94.8 0.012 4.3E-07 49.6 2.5 52 2-56 110-162 (284)
34 2wyr_A Cobalt-activated peptid 94.8 0.017 5.8E-07 49.8 3.3 45 3-57 187-231 (332)
35 2gre_A Deblocking aminopeptida 94.2 0.0092 3.1E-07 52.0 0.3 46 2-57 199-244 (349)
36 1vhe_A Aminopeptidase/glucanas 93.3 0.044 1.5E-06 48.1 3.0 39 11-57 204-242 (373)
37 2wzn_A TET3, 354AA long hypoth 93.2 4.3E-05 1.5E-09 65.3 -16.3 55 206-261 291-347 (354)
38 1y0y_A FRV operon protein FRVX 92.6 0.064 2.2E-06 46.6 3.0 39 11-57 200-238 (353)
39 3iib_A Peptidase M28; YP_92679 90.1 0.14 4.8E-06 46.1 2.6 36 2-40 282-317 (444)
40 3tc8_A Leucine aminopeptidase; 88.9 0.51 1.7E-05 40.2 5.1 52 2-55 140-201 (309)
41 3gux_A Putative Zn-dependent e 88.2 0.46 1.6E-05 40.6 4.4 52 2-55 142-204 (314)
42 1q7l_B Aminoacylase-1; catalys 83.1 0.68 2.3E-05 31.3 2.4 54 206-261 21-78 (88)
43 2afw_A Glutaminyl-peptide cycl 80.9 0.8 2.7E-05 39.3 2.6 28 9-39 155-190 (329)
44 2ek8_A Aminopeptidase; metallo 80.5 1 3.5E-05 40.0 3.2 34 2-40 253-286 (421)
45 1ylo_A Hypothetical protein SF 79.8 1.5 5.1E-05 37.6 3.9 39 11-57 189-227 (348)
46 4f9u_A CG32412; alpha/beta hyd 79.6 1.1 3.7E-05 38.0 3.0 30 8-40 127-164 (312)
47 3kl9_A PEPA, glutamyl aminopep 78.8 1.5 5.2E-05 38.0 3.7 39 10-56 201-239 (355)
48 4fuu_A Leucine aminopeptidase; 77.7 3 0.0001 35.2 5.2 52 2-55 140-202 (309)
49 1vho_A Endoglucanase; structur 76.4 1.5 5E-05 37.7 2.8 37 11-55 192-228 (346)
50 2vpu_A TET3, 354AA long hypoth 73.2 2.4 8.3E-05 36.7 3.4 44 3-55 196-239 (354)
51 3kas_A Transferrin receptor pr 71.2 1.8 6.2E-05 40.7 2.3 31 7-40 320-350 (640)
52 3pb6_X Glutaminyl-peptide cycl 68.1 2.8 9.7E-05 35.9 2.7 28 9-39 159-194 (330)
53 3fed_A Glutamate carboxypeptid 66.7 2.7 9.4E-05 40.0 2.5 31 7-40 365-395 (707)
54 4fai_A CG5976, isoform B; alph 66.1 5 0.00017 34.3 3.9 32 8-39 151-187 (330)
55 3isx_A Endoglucanase; TM1050, 64.7 5 0.00017 34.6 3.6 36 12-55 198-233 (343)
56 3cpx_A Aminopeptidase, M42 fam 60.6 3.8 0.00013 34.8 2.1 39 15-57 183-221 (321)
57 2jvf_A De novo protein M7; tet 50.1 25 0.00086 22.6 4.1 33 143-175 15-47 (96)
58 2qyv_A XAA-His dipeptidase; YP 47.4 22 0.00074 31.8 4.9 42 123-171 345-386 (487)
59 3t68_A Succinyl-diaminopimelat 45.8 9.5 0.00032 31.2 2.1 27 206-233 212-238 (268)
60 1vje_A Autoinducer-2 productio 29.3 12 0.00041 28.5 0.1 20 220-239 69-90 (166)
61 1j6x_A Autoinducer-2 productio 28.3 12 0.00039 28.4 -0.1 20 220-239 67-88 (160)
62 2ijz_A Probable M18-family ami 22.8 44 0.0015 29.6 2.5 30 2-36 245-274 (428)
63 2glj_A Probable M18-family ami 21.7 31 0.0011 30.9 1.3 25 2-27 271-295 (461)
64 4h2k_A Succinyl-diaminopimelat 20.3 49 0.0017 26.8 2.2 54 206-261 212-266 (269)
No 1
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=99.97 E-value=1.1e-31 Score=245.20 Aligned_cols=241 Identities=18% Similarity=0.182 Sum_probs=183.1
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCCC----CCceEEee---eeEEEEEEE
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD----KQPCIGTG---GMIPWKLHV 74 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~~----~~i~~~~~---g~~~~~i~v 74 (266)
+.|++.+.+++++|+|+||||||++ .|++.|+++|.+++ +|++|..|+++ +.+.++.+ +..+++|++
T Consensus 163 ~~L~~~~~~~~g~v~l~f~p~EE~~----~Ga~~~i~~g~~~~--~d~~~~~h~~~~~~~g~i~~~~~g~~a~~~~~i~v 236 (445)
T 3io1_A 163 HVLKQYAAQLNGVIKLIFQPAEEGT----RGARAMVAAGVVDD--VDYFTAIHIGTGVPAGTVVCGGDNFMATTKFDVQF 236 (445)
T ss_dssp HHHHHTGGGCCSEEEEEEESCTTTT----CHHHHHHHTTTTTT--CSEEEEEEEEEEEETTBEESCCCCBCEEEEEEEEE
T ss_pred HHHHhCcCcCCceEEEEEecccccc----chHHHHHHcCCccc--cceeEEEeccCCCCCCeEEEecCCeeEEEEEEEEE
Confidence 5677777789999999999999954 69999999988765 57999999763 45554433 357999999
Q ss_pred EecCCCc-cCCCCCCCHHHHHHHHHHHHHHhhccCCCCCCCCccCCcCCCceEeeEEEecCCCccceeCCeEEEEEEEeC
Q 024502 75 TGKLFHS-GLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (266)
Q Consensus 75 ~G~~~Ha-s~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~nviP~~a~~~~diR~ 153 (266)
+|+++|+ +.|+.|+||+.++++++.+|+.+ .+...+ .+++++|.|+ +|+..|+||++|++++|+|+
T Consensus 237 ~Gk~~HaGs~P~~g~nAi~~aa~~i~~l~~l-~~~~~~-----------~~~~~vg~i~-gG~~~NvIP~~a~~~~~iR~ 303 (445)
T 3io1_A 237 SGVAAHAGGKPEDGRNALLAAAQAALGLHAI-PPHSAG-----------ASRVNVGVMQ-AGTGRNVVPSSALLKVETRG 303 (445)
T ss_dssp ECCCSSTTCCGGGCCCHHHHHHHHHHHHHTC-CCBTTB-----------CEEEEEEEEE-ECSCTTSCCCEEEEEEEEEE
T ss_pred EeecCCCCCCCcCCcCHHHHHHHHHHHHHHH-HhhcCC-----------CeEEEEEEEe-cCCCCceeCCeEEEEEEEec
Confidence 9999998 79999999999999999999876 232222 5789999999 99999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhc--cee-ee-ccCCCCccCCcc---------ccccCCcccccC-CCCCcccccccccc
Q 024502 154 TPFYNVTDVMKRLQEYVDDINEN--IEK-LD-TRGPVSKYVLPD---------ENIRGRHVLSLH-YLTLGRDDFRIFPL 219 (266)
Q Consensus 154 ~~~~~~~~v~~~i~~~i~~~~~~--~~~-~~-~~~~p~~~~~~~---------~~~~g~~~~~~~-~~~~gg~D~~~~~~ 219 (266)
.+.++.+++.++|++.++..+.. +++ ++ ...+|++.+|+. ++++|...+... ..++|++||++|++
T Consensus 304 ~~~~~~~~i~~~i~~~~~~~a~~~g~~~~i~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~v~~~~~~~~g~~D~~~~~~ 383 (445)
T 3io1_A 304 ESEAINQYVFERAQHVVAGAAAMYEARYELRMMGAATASAPSPAWVDYLREQAARVPGVQQAVDRIAAPAGSEDATLMMA 383 (445)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEECCCCCCHHHHHHHHHHHHHSTTCCBCBSSCCCCCBCCTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecCCCCcCCCHHHHHHHHHHHHHhcCCccceecCCCCccHHHHHHHHH
Confidence 99999999999999999887543 322 22 345777878776 133454322222 33589999999998
Q ss_pred ccc-----CceeccCccc-ceeecchhhhhhhhhHHHHHHHHHHHHHh
Q 024502 220 RWQ-----RHKIKFGRLK-CIFYLSIYKFISNLFSVLNKSLAAVISRL 261 (266)
Q Consensus 220 ~~~-----~~~v~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (266)
.+| ...+.|||.. ...|..-+.+..+.+..+..-+++++.++
T Consensus 384 ~~P~~gg~~~~~~~G~~~~~~~H~~~E~i~~~~l~~g~~~~~~~~~~~ 431 (445)
T 3io1_A 384 RVQARGGLASYMIFGTELSAGHHNEKFDFDESVMAVAVETLARVALNF 431 (445)
T ss_dssp HHHHTTCEEEEEEEEEEC-----------CCCHHHHHHHHHHHHHHTC
T ss_pred HhcccCCceEEEEEeCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 876 3457889864 56677778888888899999999888765
No 2
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=99.97 E-value=6e-31 Score=236.89 Aligned_cols=242 Identities=12% Similarity=0.068 Sum_probs=188.2
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHH-HHHHccccCCCCCCcEEEEeCCCC-CceEEeeeeEEEEEEEEecCC
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVD-ALVKDGLLNKLKGGPLYWIDTADK-QPCIGTGGMIPWKLHVTGKLF 79 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~-~~i~~g~~~~~~~d~~i~~e~~~~-~i~~~~~g~~~~~i~v~G~~~ 79 (266)
+.|++.+.+++++|.|+||||||+++. .|++ .|++.|.+++ +|++|..|++++ .+..+.+|..+++|+++|+++
T Consensus 107 ~~L~~~~~~~~g~v~~~f~~~EE~~~~--~Ga~~~~~~~g~~~~--~d~~~~~h~~~~~~~~~~~~g~~~~~i~v~Gk~~ 182 (394)
T 3ram_A 107 IGLKQVIDQIGGKVVVLGCPAEEGGEN--GSAKASYVKAGVIDQ--IDIALMIHPGNETYKTIDTLAVDVLDVKFYGKSA 182 (394)
T ss_dssp HHHHTTHHHHCSEEEEEECCCTTCCTT--CCHHHHHHHHTGGGG--CSEEECCEEESSBBCCCCBCEEEEEEEEEECBCC
T ss_pred HHHHHhHhhCCceEEEEEECCccCCCC--CchHHHHHHcCCccc--CCEEEEECCccccCCCccccceeEEEEEEEcccc
Confidence 456776667899999999999998721 5899 9999998765 579999999875 456678999999999999999
Q ss_pred Ccc-CCCCCCCHHHHHHHHHHHHHHhhccCCCCCCCCccCCcCCCceEeeEEEecCCCccceeCCeEEEEEEEeCCCCCC
Q 024502 80 HSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYN 158 (266)
Q Consensus 80 Has-~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~nviP~~a~~~~diR~~~~~~ 158 (266)
|++ .|+.|+||+.++++++..|+.+... ..+ ..+++.+.++ +|+..|+||++|++.+|+|+.+.++
T Consensus 183 Ha~~~P~~g~nAi~~a~~~i~~l~~l~~~-~~~-----------~~~~~~~~i~-gG~~~NvIP~~a~~~~~iR~~~~~~ 249 (394)
T 3ram_A 183 HASENADEALNALDAMISYFNGVAQLRQH-IKK-----------DQRVHGVILD-GGKAANIIPDYTHARFYTRAMTRKE 249 (394)
T ss_dssp BHHHHGGGCBCHHHHHHHHHHHHHHHGGG-SCT-----------TCEEEEEEEE-BCSCTTBCCSEEEEEEEEEESSHHH
T ss_pred ccCCCCcCCCCHHHHHHHHHHHHHHHHhh-CCC-----------CCeeEEEEEE-CCCCCceeCCeEEEEEEEeeCCHHH
Confidence 999 9999999999999999999876322 111 3457778888 9999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhc--cee-ee--ccCCCCccCCcc-----c---cccCCcccccCCCCCcccccccccccccCce
Q 024502 159 VTDVMKRLQEYVDDINEN--IEK-LD--TRGPVSKYVLPD-----E---NIRGRHVLSLHYLTLGRDDFRIFPLRWQRHK 225 (266)
Q Consensus 159 ~~~v~~~i~~~i~~~~~~--~~~-~~--~~~~p~~~~~~~-----~---~~~g~~~~~~~~~~~gg~D~~~~~~~~~~~~ 225 (266)
.+++.++|+++++..+.. +++ ++ ...+|++.+|+. . +.+| ..+....+++||+||++|++.+|...
T Consensus 250 ~~~i~~~i~~~~~~~a~~~g~~~ei~~~~~~~~~~~~d~~l~~~~~~a~~~~G-~~~~~~~~~~g~~D~~~~~~~~P~~~ 328 (394)
T 3ram_A 250 LDILTEKVNQIARGAAIQTGCDYEFGPIQNGVNEFIKTPKLDDLFAKYAEEVG-EAVIDDDFGYGSTDTGNVSHVVPTIH 328 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCEEEEEESSCCBCCCCCCHHHHHHHHHHHHHTT-CCBCCSCCCCBCCTHHHHTTTSCBCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCeEEEEEecCCCCCccCCHHHHHHHHHHHHHhC-cccccCCCCcccccHHHHHHHhchhe
Confidence 999999999999877642 332 22 356788888876 1 2255 33323467899999999998888554
Q ss_pred ecc--Ccccceeecchhh------hhhhhhHHHHHHHHHHHHHh
Q 024502 226 IKF--GRLKCIFYLSIYK------FISNLFSVLNKSLAAVISRL 261 (266)
Q Consensus 226 v~~--G~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 261 (266)
+.+ |+.....|...|. +..+-+..+.+-+++++.++
T Consensus 329 ~~~g~~~~~~~~H~~ef~~~~~~~~~~~~l~~g~~~la~~~~~~ 372 (394)
T 3ram_A 329 PHIKIGSRNLVGHTHRFREAAASVHGDEALIKGAKIMALMGLEL 372 (394)
T ss_dssp CEEECSCTTCCTTSHHHHHHTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeeecCCCCCCCCHHHHhccCCCccHHHHHHHHHHHHHHHHHH
Confidence 433 3333455666666 46677778888888887665
No 3
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=99.97 E-value=1.2e-29 Score=230.88 Aligned_cols=247 Identities=11% Similarity=0.087 Sum_probs=191.6
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCCCCCceEEeeeeEEEEEEEEecCCCc
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHS 81 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~~~~i~~~~~g~~~~~i~v~G~~~Ha 81 (266)
+.|++.+..++++|.|+|++|||.++ .|++.+++.+ +++|++++.||+...+.++++|..+++|+++|+++|+
T Consensus 157 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~G~~~~~~~~----~~~d~~i~~ep~~~~i~~~~~G~~~~~i~v~G~~~Ha 229 (433)
T 3pfo_A 157 DAIRTAGYAPDARVHVQTVTEEESTG---NGALSTLMRG----YRADACLIPEPTGHTLTRAQVGAVWFRLRVRGTPVHV 229 (433)
T ss_dssp HHHHHTTEEESSCEEEEEESCTTTTC---HHHHHHHHTT----CCCSEEEECCCCSSCEEEEECEEEEEEEEEECCCCBG
T ss_pred HHHHHcCCCCCccEEEEEEecCccCC---hhHHHHHhcC----CCCCEEEEeCCCCCceEEecceEEEEEEEEEcCCCcc
Confidence 56777777789999999999999987 7999999875 3678999999887778889999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHhhccC-----CCCCCCCccCCcCCCceEeeEEEecCCCccceeCCeEEEEEEEeCCCC
Q 024502 82 GLPHKAINPLELAMEALKVIQTRFYKD-----FPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPF 156 (266)
Q Consensus 82 s~P~~g~nAi~~~a~~i~~l~~~~~~~-----~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~nviP~~a~~~~diR~~~~ 156 (266)
+.|+.|+||+..+++++.+|+.+..+. .++. ......++++++|.|+ +|...|+||++|++.+++|+++.
T Consensus 230 ~~p~~g~nAi~~~~~~i~~l~~l~~~~~~~~~~~~~----~~~~~~~~~~~vg~i~-gG~~~NvIP~~a~~~~~iR~~~~ 304 (433)
T 3pfo_A 230 AYSETGTSAILSAMHLIRAFEEYTKELNAQAVRDPW----FGQVKNPIKFNVGIIK-GGDWASSTAAWCELDCRLGLLTG 304 (433)
T ss_dssp GGGGGSCCHHHHHHHHHHHHHHHHHHHHHHGGGCTT----TTTSSSCSCEEEEEEE-ECSCTTBCCCEEEEEEEEEECTT
T ss_pred CCCCcCcCHHHHHHHHHHHHHHHHHHhhhccccCcc----ccccCCCceEEeeeEE-CCCCCcccCcEEEEEEEEecCCC
Confidence 999999999999999999998753211 0110 0011125689999999 99999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhhc--------cee-eeccCCCCccCCcc-----------ccccCCcccccCCCCCccccccc
Q 024502 157 YNVTDVMKRLQEYVDDINEN--------IEK-LDTRGPVSKYVLPD-----------ENIRGRHVLSLHYLTLGRDDFRI 216 (266)
Q Consensus 157 ~~~~~v~~~i~~~i~~~~~~--------~~~-~~~~~~p~~~~~~~-----------~~~~g~~~~~~~~~~~gg~D~~~ 216 (266)
++.+++.++|++.+++.+.. +++ +....+||..++++ ++.+|... ...++.|++|+++
T Consensus 305 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~~~d~~~~~~~~~a~~~~~G~~~--~~~~~~g~~D~~~ 382 (433)
T 3pfo_A 305 DTPQEAMRGIEKCLADAQATDSFLSENPAELVWSGFQADPAVCEPGGVAEDVLTAAHKAAFNAPL--DARLSTAVNDTRY 382 (433)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHSCCEEEEEEEEECCEECCTTCHHHHHHHHHHHHHHSSCC--CEEEESSCCTHHH
T ss_pred CCHHHHHHHHHHHHHHHhhhCcccccCCeEEEEecccCCcccCCCCCHHHHHHHHHHHHHhCCCC--ceeeeeeeccHHH
Confidence 99999999999999887643 222 11134677766544 12355431 2245789999999
Q ss_pred ccccccCceeccCcccceeecchhhhhhhhhHHHHHHHHHHHHHhh
Q 024502 217 FPLRWQRHKIKFGRLKCIFYLSIYKFISNLFSVLNKSLAAVISRLQ 262 (266)
Q Consensus 217 ~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (266)
|.+....+.+.|||.....|..-....-+-+..+..-+++++.++.
T Consensus 383 ~~~~~giP~v~~Gp~~~~~H~~~E~i~~~~l~~~~~~~~~~i~~~~ 428 (433)
T 3pfo_A 383 YSVDYGIPALCYGPYGQGPHAFDERIDLESLRKTTLSIALFVAEWC 428 (433)
T ss_dssp HHHTTCCCEEECCCCEECTTSTTCEEEHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhCCCCEEEECCCCccCCCCCceEEHHHHHHHHHHHHHHHHHHh
Confidence 9875345567799987666666666667777888888888887663
No 4
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=99.96 E-value=2.9e-29 Score=227.49 Aligned_cols=242 Identities=18% Similarity=0.263 Sum_probs=165.6
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCC----CCC----ceEEeeeeEEEEEE
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA----DKQ----PCIGTGGMIPWKLH 73 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~----~~~----i~~~~~g~~~~~i~ 73 (266)
+.|++.+.+++++|+|+|++||| |+ .|++.|++++.+++ +|+++..|+. .+. +..+++|..+++|+
T Consensus 130 ~~l~~~~~~~~~~v~~~~~~~EE-g~---~G~~~~~~~g~~~~--~d~~i~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~ 203 (418)
T 1xmb_A 130 KILHEHRHHLQGTVVLIFQPAEE-GL---SGAKKMREEGALKN--VEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAV 203 (418)
T ss_dssp HHHHHTGGGCSSEEEEEEECCTT-TT---CHHHHHHHTTTTTT--EEEEEEEEEEEEEETTCEEECSEEEECEEEEEEEE
T ss_pred HHHHhccccCCceEEEEEecccc-cc---ccHHHHHHcCCcCC--CCEEEEEecCCCCCCceeEeeeccccccceeEEEE
Confidence 56777777799999999999999 76 79999999886543 5788886532 122 34578999999999
Q ss_pred EEecCCCccCCCCCCCHHHHHHHHHHHHHHhhccCCCCCCCCccCCcCCCceEeeEEEecCCCccceeCCeEEEEEEEeC
Q 024502 74 VTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (266)
Q Consensus 74 v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~nviP~~a~~~~diR~ 153 (266)
++|+++|++.|+.|+||+.++++++.+|+.+..+..++. ...++++|.|+ +|...|+||++|++.+|+|+
T Consensus 204 v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~---------~~~t~~vg~i~-gG~~~NvIP~~a~~~~diR~ 273 (418)
T 1xmb_A 204 ITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPL---------DSKVVTVSKVN-GGNAFNVIPDSITIGGTLRA 273 (418)
T ss_dssp EEEC---------CCHHHHHHHHHHHHHHTTCBCCSSGG---------GCEEEEEEEEC---------CCEEEEEEEEEE
T ss_pred EEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccCCC---------CCcEEEEEEEE-ecCcCCcCCCeEEEEEEEcc
Confidence 999999999999999999999999999987643332221 14689999998 99999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhc--cee-ee-ccC----CCCccCCcc---------ccccCCcccccCCCCCccccccc
Q 024502 154 TPFYNVTDVMKRLQEYVDDINEN--IEK-LD-TRG----PVSKYVLPD---------ENIRGRHVLSLHYLTLGRDDFRI 216 (266)
Q Consensus 154 ~~~~~~~~v~~~i~~~i~~~~~~--~~~-~~-~~~----~p~~~~~~~---------~~~~g~~~~~~~~~~~gg~D~~~ 216 (266)
++ +.+++.++|++.++..+.. +++ ++ ... +|+..+++. ++++|...+....++.|++|+++
T Consensus 274 ~~--~~~~i~~~i~~~~~~~a~~~g~~~~~~~~~~~~~p~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~ 351 (418)
T 1xmb_A 274 FT--GFTQLQQRVKEVITKQAAVHRCNASVNLTPNGREPMPPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSY 351 (418)
T ss_dssp SS--CHHHHHHHHHHHHHHHHHHTTEEEEEESSGGGCCCBCCEEECHHHHHHHHHHHHHHHCGGGEEECCCBCCCCTHHH
T ss_pred Cc--HHHHHHHHHHHHHHHHHHHhCCeEEEEEccCCcccCCCccCCHHHHHHHHHHHHHhcCCcceeccCCCCCcchHHH
Confidence 99 8999999999999876532 222 22 223 566655554 12355432222457889999999
Q ss_pred ccccccCceeccCccc-----ceeecchhhhhhhhhHHHHHHHHHHHHHh
Q 024502 217 FPLRWQRHKIKFGRLK-----CIFYLSIYKFISNLFSVLNKSLAAVISRL 261 (266)
Q Consensus 217 ~~~~~~~~~v~~G~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (266)
|.+.+|.-.+.|||.. ...|..-+...-+.+..+.+-+++++.++
T Consensus 352 ~~~~~P~~~~~~G~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l 401 (418)
T 1xmb_A 352 FAETIPGHFSLLGMQDETNGYASSHSPLYRINEDVLPYGAAIHASMAVQY 401 (418)
T ss_dssp HHTTSCEEEEEEEEECTTCCSCCTTCTTCCCCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHCCEEEEEEeCCCCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHHHH
Confidence 9987776567788864 33455555555666777777777777665
No 5
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=99.96 E-value=2.8e-29 Score=226.71 Aligned_cols=242 Identities=16% Similarity=0.218 Sum_probs=170.9
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCCC----CCceE--E--eeeeEEEEEE
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD----KQPCI--G--TGGMIPWKLH 73 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~~----~~i~~--~--~~g~~~~~i~ 73 (266)
+.|++.+..++++|+|+|++|||+ + .|++.|++.+.+++ +|+++..|+.+ +.+.. + ++|..+++|+
T Consensus 136 ~~l~~~~~~~~~~v~~~~~~~EE~-~---~G~~~~~~~g~~~~--~d~~i~~h~ep~~~~g~v~~~~g~~~~g~~~~~i~ 209 (404)
T 1ysj_A 136 MLLNQRRAELKGTVRFIFQPAEEI-A---AGARKVLEAGVLNG--VSAIFGMHNKPDLPVGTIGVKEGPLMASVDRFEIV 209 (404)
T ss_dssp HHHHTCGGGCSSEEEEEEESCTTT-T---CHHHHHHHTTTTTT--EEEEEEEEEETTSCTTEEEECSEEEECCEEEEEEE
T ss_pred HHHHhccccCCceEEEEEeccccc-c---hhHHHHHhcCCCcC--CCEEEEEecCCCCCCceEEeccChhhcccceEEEE
Confidence 467777778899999999999999 5 79999999876543 46888774332 22322 3 6789999999
Q ss_pred EEecCCCccCCCCCCCHHHHHHHHHHHHHHhhccCCCCCCCCccCCcCCCceEeeEEEecCCCccceeCCeEEEEEEEeC
Q 024502 74 VTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (266)
Q Consensus 74 v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~nviP~~a~~~~diR~ 153 (266)
++|+++|++.|+.|.||+.++++++.+|+.+..+..++. ...++++|.|+ +|+..|+||++|++++|+|+
T Consensus 210 v~G~~~Has~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~---------~~~~~~vg~i~-gG~~~NvIP~~a~~~~diR~ 279 (404)
T 1ysj_A 210 IKGKGGHASIPNNSIDPIAAAGQIISGLQSVVSRNISSL---------QNAVVSITRVQ-AGTSWNVIPDQAEMEGTVRT 279 (404)
T ss_dssp EECC--------CCCCHHHHHHHHHHHHC--------------------CCEEEEEEEE-ECSCSSSCCSEEEEEEEEEC
T ss_pred EEccCccccCcccCCCHHHHHHHHHHHHHHHHhhhcCCC---------CCcEEEEEEEE-cCCCCceecCceEEEEEEec
Confidence 999999999999999999999999999976543322221 14689999999 99999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhc--cee-ee-ccCCCCccCCcc---------ccc-cCCcccccCCCCCcccccccccc
Q 024502 154 TPFYNVTDVMKRLQEYVDDINEN--IEK-LD-TRGPVSKYVLPD---------ENI-RGRHVLSLHYLTLGRDDFRIFPL 219 (266)
Q Consensus 154 ~~~~~~~~v~~~i~~~i~~~~~~--~~~-~~-~~~~p~~~~~~~---------~~~-~g~~~~~~~~~~~gg~D~~~~~~ 219 (266)
++.++.+++.+++++.+++.+.. +++ ++ ...+||+.+++. ++. +|... .. ++.|++|+++|++
T Consensus 280 ~~~~~~~~i~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~g~~~--~~-~~~g~tD~~~~~~ 356 (404)
T 1ysj_A 280 FQKEARQAVPEHMRRVAEGIAAGYGAQAEFKWFPYLPSVQNDGTFLNAASEAAARLGYQTVH--AE-QSPGGEDFALYQE 356 (404)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEECCEEECGGGHHHHHHHHHHTTCEEEE--CC-CBSSCCTHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEEecCCCCccCCHHHHHHHHHHHHHhcCCccc--cc-cCCccchHHHHHH
Confidence 99999999999999999876532 322 22 345677777765 122 34321 12 6889999999998
Q ss_pred cccCceeccCccc-ceeecchhhhhhhhhHHHHHHHHHHHHHhh
Q 024502 220 RWQRHKIKFGRLK-CIFYLSIYKFISNLFSVLNKSLAAVISRLQ 262 (266)
Q Consensus 220 ~~~~~~v~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (266)
.+|...+.|||.. ...|..-....-+.+..+..-+++++.++.
T Consensus 357 ~~p~~~~~~G~~~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~ 400 (404)
T 1ysj_A 357 KIPGFFVWMGTNGTEEWHHPAFTLDEEALTVASQYFAELAVIVL 400 (404)
T ss_dssp TSCEEEEEEECCCSSCTTCTTCCCCTTHHHHHHHHHHHHHHHHH
T ss_pred HCCeEEEEEcCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 7776567899986 445555555555666677777777776653
No 6
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=99.96 E-value=2.7e-28 Score=219.39 Aligned_cols=246 Identities=17% Similarity=0.153 Sum_probs=178.9
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCCCC-----CceEEeeeeEEEEEEEEe
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK-----QPCIGTGGMIPWKLHVTG 76 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~~~-----~i~~~~~g~~~~~i~v~G 76 (266)
+.|++.+.+++++|+|+|++|||+++. .|++.|++.+..++.++|+++..|++.. .+..+.+|..+++|+++|
T Consensus 116 ~~l~~~~~~~~~~v~~~~~~~EE~~~~--~Ga~~~~~~~~~~~~~~d~~i~~e~~~~~~~g~~i~~g~~G~~~~~i~v~G 193 (393)
T 1vgy_A 116 ERFVAKHPNHQGSIALLITSDEEGDAL--DGTTKVVDVLKARDELIDYCIVGEPTAVDKLGDMIKNGRRGSLSGNLTVKG 193 (393)
T ss_dssp HHHHHHCTTCSSEEEEEEESCSSSCCT--TSHHHHHHHHHHTTCCEEEEEECCCCBSSSTTSEEECEECEEEEEEEEEEC
T ss_pred HHHHHhcCCCCCcEEEEEEeccccCCc--CCHHHHHHHHHhcCcCCCEEEEeCCCCcccCCceeEEeeeeEEEEEEEEEc
Confidence 445666667899999999999998532 5999998876555566789998888643 245688999999999999
Q ss_pred cCCCccCCCCCCCHHHHHHHHHHHHHHhhccCCCCCCCCccCCcCCCceEeeEEEecCCC-ccceeCCeEEEEEEEeCCC
Q 024502 77 KLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGG-GINQIPGECTVSGDVRLTP 155 (266)
Q Consensus 77 ~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~-~~nviP~~a~~~~diR~~~ 155 (266)
+++|++.|+.|+||+..+++++.+++....+... ....+.+++++.|+ +|. ..|+||++|++.+|+|+++
T Consensus 194 ~~~Ha~~P~~g~nAi~~~a~~i~~l~~~~~~~~~--------~~~~~~~~~v~~i~-gG~~~~NviP~~a~~~~diR~~~ 264 (393)
T 1vgy_A 194 KQGHIAYPHLAINPVHTFAPALLELTQEVWDEGN--------EYFPPTSFQISNIN-GGTGATNVIPGELNVKFNFRFST 264 (393)
T ss_dssp BCEETTCGGGCBCHHHHHHHHHHHHHHCCCCCCC--------SSCCCCEEEEEEEE-ECCSCTTEECSEEEEEEEEEECT
T ss_pred cCcccCCCccCCCHHHHHHHHHHHhhcccccccc--------cccCCCeEEEeeEc-CCCCCCcccCCeEEEEEEEecCC
Confidence 9999999999999999999999999875321111 11125689999999 776 8999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhhccee-eeccCCCCccCCcc---------ccccCCcccccCCCCCcccccccccc-cccCc
Q 024502 156 FYNVTDVMKRLQEYVDDINENIEK-LDTRGPVSKYVLPD---------ENIRGRHVLSLHYLTLGRDDFRIFPL-RWQRH 224 (266)
Q Consensus 156 ~~~~~~v~~~i~~~i~~~~~~~~~-~~~~~~p~~~~~~~---------~~~~g~~~~~~~~~~~gg~D~~~~~~-~~~~~ 224 (266)
.++.+++.++|++.++....++++ +.....|...+++. ++.+|... ....+.|++|+++|.. .+|
T Consensus 265 ~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~g~~~--~~~~~~g~~D~~~~~~~~~P-- 340 (393)
T 1vgy_A 265 ESTEAGLKQRVHAILDKHGVQYDLQWSCSGQPFLTQAGKLTDVARAAIAETCGIEA--ELSTTGGTSDGRFIKAMAQE-- 340 (393)
T ss_dssp TSCHHHHHHHHHHHHHHTTCCEEEEEEEEECCEECCSSHHHHHHHHHHHHHHSSCC--EEECCSCCCTHHHHGGGEEE--
T ss_pred CCCHHHHHHHHHHHHHHhCCCeEEEEecCCCcccCCCcHHHHHHHHHHHHHcCCCc--eEecCCccchHHHHHhCCCC--
Confidence 999999999999999875444332 11122333444333 12345432 2245678999999987 444
Q ss_pred eeccCcccceeecchhhhhhhhhHHHHHHHHHHHHHhh
Q 024502 225 KIKFGRLKCIFYLSIYKFISNLFSVLNKSLAAVISRLQ 262 (266)
Q Consensus 225 ~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (266)
.+.|||.....|..-....-+-+..+..-+++++.+|.
T Consensus 341 ~v~~Gp~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~ 378 (393)
T 1vgy_A 341 LIELGPSNATIHQINENVRLNDIPKLSAVYEGILVRLL 378 (393)
T ss_dssp EEECCSBCTTTTSTTCEEETTHHHHHHHHHHHHHHHHC
T ss_pred EEEECCCCCCCCCCCCceeHHHHHHHHHHHHHHHHHHh
Confidence 68899976433333333333445567777777777763
No 7
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=99.95 E-value=1.5e-27 Score=212.79 Aligned_cols=246 Identities=17% Similarity=0.114 Sum_probs=171.6
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCCCCC-----ceEEeeeeEEEEEEEEe
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQ-----PCIGTGGMIPWKLHVTG 76 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~~~~-----i~~~~~g~~~~~i~v~G 76 (266)
+.|++.+.+++++|+|+|++|||.++. .|++.|++.+..++.++|.++..|++... +.++.+|..+++|+++|
T Consensus 113 ~~l~~~~~~~~~~v~~~~~~~EE~~~~--~G~~~~~~~~~~~~~~~d~~~~~e~~~~~~~g~~i~~g~~g~~~~~i~~~G 190 (377)
T 3isz_A 113 EEYVKANPNHKGTIALLITSDEEATAK--DGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGSITGNLYIQG 190 (377)
T ss_dssp HHHHHHCTTCSSEEEEEEESCSSSCCS--SSHHHHHHHHHHTTCCCCEEEECCCCBSSSTTSEEEEEECEEEEEEEEEEC
T ss_pred HHHHHhCCCCCceEEEEEEcccccCcc--ccHHHHHHHHHhcCCCCCEEEEcCCCCcccCCceEEEEcceEEEEEEEEEc
Confidence 345556667899999999999999752 39999988655455668999998886432 45688999999999999
Q ss_pred cCCCccCCCCCCCHHHHHHHHHHHHHHhhccCCCCCCCCccCCcCCCceEeeEEEecCCC-ccceeCCeEEEEEEEeCCC
Q 024502 77 KLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGG-GINQIPGECTVSGDVRLTP 155 (266)
Q Consensus 77 ~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~-~~nviP~~a~~~~diR~~~ 155 (266)
+++|++.|+.|+||+..+++++.+|+....+... .+...++++++.++ +|. ..|+||++|++.+|+|+++
T Consensus 191 ~~~Ha~~p~~g~nai~~~~~~i~~l~~~~~~~~~--------~~~~~~~~~v~~i~-gg~~~~nvip~~~~~~~diR~~~ 261 (377)
T 3isz_A 191 IQGHVAYPHLAENPIHKAALFLQELTTYQWDKGN--------EFFPPTSLQIANIH-AGTGSNNVIPAELYIQFNLRYCT 261 (377)
T ss_dssp C-------CGGGCHHHHHHHHHHHHHHCCCCCCC--------SSSCCCEEEEEEEE-ECCSCSSCCCSEEEEEEEEEECT
T ss_pred cccccCCCccCcCHHHHHHHHHHHHHhccccccc--------cccCCceeEEEEEE-CCCCCCcccCCceEEEEEEecCC
Confidence 9999999999999999999999999875322111 11235789999999 776 7999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhhcceeeec-cCCCCccCCcc---------ccccCCcccccCCCCCcccccccccccccCce
Q 024502 156 FYNVTDVMKRLQEYVDDINENIEKLDT-RGPVSKYVLPD---------ENIRGRHVLSLHYLTLGRDDFRIFPLRWQRHK 225 (266)
Q Consensus 156 ~~~~~~v~~~i~~~i~~~~~~~~~~~~-~~~p~~~~~~~---------~~~~g~~~~~~~~~~~gg~D~~~~~~~~~~~~ 225 (266)
.++.+++.+++++.+++...++++... ...|...+++. ++.+|... ...++.|++|+++|.+. ..+.
T Consensus 262 ~~~~~~i~~~i~~~~~~~g~~~~i~~~~~~~p~~~~~~~l~~~l~~a~~~~~g~~~--~~~~~~g~tDa~~~~~~-g~~~ 338 (377)
T 3isz_A 262 EVTDEIIKQKVAEMLEKHNLKYRIEWNLSGKPFLTKPGKLLDSITSAIEETIGITP--KAETGGGTSDGRFIALM-GAEV 338 (377)
T ss_dssp TSCHHHHHHHHHHHHHHTTCCEEEEEEECCCCEECCTTHHHHHHHHHHHHHHSCCC--EEEECSSCCSHHHHHTT-TCEE
T ss_pred CCCHHHHHHHHHHHHHHcCCCeEEEEEecCCCCcCCCCHHHHHHHHHHHHHhCCCC--eeeccCcccHHHHHHHc-CCCE
Confidence 999999999999999875544443112 22333333433 12345431 12456789999998865 4677
Q ss_pred eccCcccceeecchhhhhhhhhHHHHHHHHHHHHHh
Q 024502 226 IKFGRLKCIFYLSIYKFISNLFSVLNKSLAAVISRL 261 (266)
Q Consensus 226 v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (266)
+.|||.....|..--...-+-+..+..-+++++.+|
T Consensus 339 v~~Gp~~~~~H~~~E~i~~~~l~~~~~i~~~~i~~l 374 (377)
T 3isz_A 339 VEFGPLNSTIHKVNECVSVEDLGKCGEIYHKMLVNL 374 (377)
T ss_dssp EECCSBCTTTTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCcccCCCCcEEHHHHHHHHHHHHHHHHHH
Confidence 889998744444333333334555666677777665
No 8
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=99.95 E-value=2.7e-28 Score=217.57 Aligned_cols=244 Identities=14% Similarity=0.109 Sum_probs=176.9
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCCCCCceEEeeeeEEEEEEEEecCCCc
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHS 81 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~~~~i~~~~~g~~~~~i~v~G~~~Ha 81 (266)
+.|++. ..++++|+|+|++|||+|+.. .|++.+++.+ .+.+++|+++..||+.+.+.++++|..+++|+++|+++|+
T Consensus 116 ~~l~~~-~~~~~~v~~~~~~~EE~g~~~-~G~~~~~~~~-~~~~~~~~~i~~ep~~~~i~~~~~G~~~~~i~v~G~~~Ha 192 (369)
T 3tx8_A 116 ATLATS-TELKHDLTLIAYECEEVADHL-NGLGHIRDEH-PEWLAADLALLGEPTGGWIEAGCQGNLRIKVTAHGVRAHS 192 (369)
T ss_dssp HHHTSC-TTCCSEEEEEEECCCSSCTTS-CHHHHHHHHC-GGGGCCSEEEECCCCTTCEEESBCEEEEEEEEEECBCCBT
T ss_pred HHHHhh-cCCCccEEEEEEeccccCccc-ccHHHHHHhc-ccccCCCEEEEeCCCCCceeeecceEEEEEEEEeeecccc
Confidence 455553 467999999999999998521 3999999876 4456778999999988888889999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHhhccCCCCCCCCccCCcCCCceEeeEEEecCCCccceeCCeEEEEEEEeCCCCCCHHH
Q 024502 82 GLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTD 161 (266)
Q Consensus 82 s~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~nviP~~a~~~~diR~~~~~~~~~ 161 (266)
+.|+.|+||+..+++++.+++.+..+.... + +.....++++|.|+ +|...|+||++|++.+|+|+++.++.++
T Consensus 193 ~~p~~g~nAi~~~a~~i~~l~~~~~~~~~~-~-----~~~~~~~~~vg~i~-gG~~~NvIP~~a~~~~diR~~~~~~~~~ 265 (369)
T 3tx8_A 193 ARSWLGDNAMHKLSPIISKVAAYKAAEVNI-D-----GLTYREGLNIVFCE-SGVANNVIPDLAWMNLNFRFAPNRDLNE 265 (369)
T ss_dssp TSGGGSBCTGGGGHHHHHHHHHCCCCEEEE-T-----TEEEECEEEEEEEE-ECSBTTBCCSEEEEEEEEEECTTSCHHH
T ss_pred CCCCcCcCHHHHHHHHHHHHHhhccccccc-C-----CcccCceEEEEEEE-CCCCCccccCcEEEEEEEecCCCCCHHH
Confidence 999999999999999999998753221100 0 01113589999999 9999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh-hccee-e-e-ccCCCCccCCcc----ccccCCcccccCCCCCcccccccccccccCceeccCccc-
Q 024502 162 VMKRLQEYVDDIN-ENIEK-L-D-TRGPVSKYVLPD----ENIRGRHVLSLHYLTLGRDDFRIFPLRWQRHKIKFGRLK- 232 (266)
Q Consensus 162 v~~~i~~~i~~~~-~~~~~-~-~-~~~~p~~~~~~~----~~~~g~~~~~~~~~~~gg~D~~~~~~~~~~~~v~~G~~~- 232 (266)
+.++|++.+++.+ .++++ + . ...+++..++|. .+.+|.. .+.++.|++|+++|.+. ..+.+.|||..
T Consensus 266 v~~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~~~ggtD~~~~~~~-giP~~~~Gpg~~ 341 (369)
T 3tx8_A 266 AIEHVVETLELDGQDGIEWAVEDGAGGALPGLGQQVTSGLIDAVGRE---KIRAKFGWTDVSRFSAM-GIPALNFGAGDP 341 (369)
T ss_dssp HHHHHHHHTTTTTSTTEEEEEEEEECCBCCCTTSHHHHHHHHHHCGG---GEEECCSCCTHHHHHTT-TCCEEEECSSCS
T ss_pred HHHHHHHHHHhcccCCeEEEEEecCCCCCCCCCCHHHHHHHHHcCCC---CCcccccccchHHHhhC-CCCEEEECCCCh
Confidence 9999999887644 12222 2 2 234555556654 1234431 12357789999999864 34456799975
Q ss_pred ceeecchhhhhhhhhHHHHHHHHHHHH
Q 024502 233 CIFYLSIYKFISNLFSVLNKSLAAVIS 259 (266)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (266)
...|..-....-.-+..+..-+++++.
T Consensus 342 ~~~H~~~E~v~~~~l~~~~~~l~~~l~ 368 (369)
T 3tx8_A 342 SFAHKRDEQCPVEQITDVAAILKQYLS 368 (369)
T ss_dssp SSSSCTTCEEEHHHHHHHHHHHHHHHH
T ss_pred hhCCCCCcEEEHHHHHHHHHHHHHHhh
Confidence 333333333333344455555555553
No 9
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=99.95 E-value=1e-27 Score=214.00 Aligned_cols=233 Identities=12% Similarity=0.051 Sum_probs=167.4
Q ss_pred CCceEEEEEEcCCCC-CCCCCchHHHHHHccccCCCCCCcEEEEeCCCCCceEEeeeeEEEEEEEEecCCCccCCC-CCC
Q 024502 11 LKSTVIAVFIASEEN-SAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHSGLPH-KAI 88 (266)
Q Consensus 11 ~~~~v~~if~~dEE~-g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~~~~i~~~~~g~~~~~i~v~G~~~Has~P~-~g~ 88 (266)
++++|+|+|++|||. |+ .|++.+++.+. ++|+++..|++.+.+.++++|..+++|+++|+++|++.|+ .|.
T Consensus 121 ~~~~v~~~~~~~EE~~g~---~G~~~~~~~~~----~~d~~i~~e~~~~~i~~~~~g~~~~~i~v~G~~~Ha~~p~~~g~ 193 (369)
T 2f7v_A 121 GDGDAAFLFSSDEEANDP---RCIAAFLARGL----PYDAVLVAEPTMSEAVLAHRGISSVLMRFAGRAGHASGKQDPAA 193 (369)
T ss_dssp CCCCEEEEEESCTTSSSC---CHHHHHHTTCC----CCSEEEECCCSTTCBBCCBCCEEEEEEEEECCCC------CTTS
T ss_pred CCCCEEEEEEeCcccCCC---cCHHHHHhcCC----CCCEEEECCCCCCcceeecCceEEEEEEEeeeCcccCCCCcCCC
Confidence 789999999999999 76 79999998764 5789999998877788899999999999999999999999 999
Q ss_pred CHHHHHHHHHHHHHHhhccCCCCCCCCccCCcCCCceEeeEEEecCCCccceeCCeEEEEEEEeCCCCCCHHHHHHHHHH
Q 024502 89 NPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQE 168 (266)
Q Consensus 89 nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~ 168 (266)
||+..+++++.+|+.+..+. .... .....+ .++++|.|+ +|...|+||++|++.+|+|+++.++.+++.++|++
T Consensus 194 nAi~~~~~~i~~l~~~~~~~-~~~~---~~~~~~-~~~~vg~i~-gG~~~NviP~~a~~~~diR~~~~~~~~~~~~~i~~ 267 (369)
T 2f7v_A 194 SALHQAMRWGGKALDHVESL-AHAR---FGGLTG-LRFNIGRVD-GGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAG 267 (369)
T ss_dssp CHHHHHHHHHHHHHHHHHHT-TTCE---ETTEES-CEEEEEEEE-ECSSTTSCCSEEEEEEEEECCTTCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhhhhh-cccc---cCcccC-CceEEEEee-cCCCCCcCCCceEEEEEEeeCCCCCHHHHHHHHHH
Confidence 99999999999998764321 1000 000011 589999999 99999999999999999999999999999999998
Q ss_pred HHHHHhhcceeeec-cCCCCccCCc-c---------ccccCCcccccCCCCCcccccccccccccCceeccCccc-ceee
Q 024502 169 YVDDINENIEKLDT-RGPVSKYVLP-D---------ENIRGRHVLSLHYLTLGRDDFRIFPLRWQRHKIKFGRLK-CIFY 236 (266)
Q Consensus 169 ~i~~~~~~~~~~~~-~~~p~~~~~~-~---------~~~~g~~~~~~~~~~~gg~D~~~~~~~~~~~~v~~G~~~-~~~~ 236 (266)
.+++...++++... ..+||+.+++ . ++.+|... . .++.|++|+++|.+. ..+.+.|||.. ...|
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~g~~~--~-~~~~g~~D~~~~~~~-g~p~v~~Gpg~~~~~H 343 (369)
T 2f7v_A 268 FADPAAAHFEETFRGPSLPSGDIARAEERRLAARDVADALDLPI--G-NAVDFWTEASLFSAG-GYTALVYGPGDIAQAH 343 (369)
T ss_dssp TCSSCCSEEEEEEEECCBSCSSHHHHHHHHHHHHHHHHHTTCCB--C-CCBSSCCTHHHHHHT-TCCEEECCSSCGGGTT
T ss_pred HHHHhcCceEEEeccCCCCccCCCCCHHHHHHHHHHHHhhCCCC--C-ccccccCcHHHHhhC-CCCEEEECCCCccccC
Confidence 87655433332112 3578887763 2 12345432 1 457899999999875 34567999954 3334
Q ss_pred cchhhhhhhhhHHHHHHHHHHHHH
Q 024502 237 LSIYKFISNLFSVLNKSLAAVISR 260 (266)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~ 260 (266)
..-....-+.+..+..-+++++.+
T Consensus 344 ~~~E~~~~~~l~~~~~~~~~~~~~ 367 (369)
T 2f7v_A 344 TADEFVTLAQLQRYVESVNRIING 367 (369)
T ss_dssp CTTCEEEHHHHHHHHHHHHHHHHC
T ss_pred CCCceEEHHHHHHHHHHHHHHHHh
Confidence 443333444455566666666543
No 10
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.95 E-value=2.7e-27 Score=210.28 Aligned_cols=233 Identities=14% Similarity=0.153 Sum_probs=174.4
Q ss_pred hhhhcccCCCCceEEEEEEcCCCC-CCCCCchHHHHHHccccCCCCCCcEEEEeCCCCCceEEeeeeEEEEEEEEecCCC
Q 024502 2 RKLGETKLKLKSTVIAVFIASEEN-SAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFH 80 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~-g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~~~~i~~~~~g~~~~~i~v~G~~~H 80 (266)
+.|++.+ ++++|+|+|++|||+ |+ .|++.+++.+. ++|+++..||+.+.+.++.+|..+++|+++|+++|
T Consensus 118 ~~l~~~~--~~~~v~~~~~~~EE~~g~---~G~~~~~~~~~----~~d~~i~~ep~~~~i~~~~~G~~~~~i~~~G~~~H 188 (356)
T 3ct9_A 118 LQLCRTS--QNYNLIYLASCEEEVSGK---EGIESVLPGLP----PVSFAIVGEPTEMQPAIAEKGLMVLDVTATGKAGH 188 (356)
T ss_dssp HHHTTSC--CSSEEEEEEECCGGGTCT---TTHHHHGGGSC----CCSEEEECCSBTTCCEEEECCCEEEEEEEECBCCB
T ss_pred HHHHhcC--CCCCEEEEEEeCcccCCc---cCHHHHHhhCC----CCCEEEEcCCCCceEEEeeeEEEEEEEEEECCCcc
Confidence 4566665 789999999999998 76 79999998752 56889999988777888999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHhhccCCCCCCCCccCCcCCCceEeeEEEecCCCccceeCCeEEEEEEEeCCCCCCHH
Q 024502 81 SGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVT 160 (266)
Q Consensus 81 as~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~nviP~~a~~~~diR~~~~~~~~ 160 (266)
++.| .|+||+..+++++.+++.+..+..++ ..+..++++|.|+ +|...|+||++|++.+|+|+++.++.+
T Consensus 189 a~~p-~g~nAi~~~~~~i~~l~~~~~~~~~~--------~~~~~~~~vg~i~-gG~~~NviP~~a~~~~~iR~~~~~~~~ 258 (356)
T 3ct9_A 189 AARD-EGDNAIYKVLNDIAWFRDYRFEKESP--------LLGPVKMSVTVIN-AGTQHNVVPDKCTFVVDIRSNELYSNE 258 (356)
T ss_dssp TTSS-CCBCTTGGGHHHHHHHHHCCCSCCBT--------TTBSCEEEEEEEE-ECSSTTBCCSEEEEEEEEECCTTCCHH
T ss_pred cCCC-CCCCHHHHHHHHHHHHHhhhcccccc--------cCCCCcEEeeEEe-cCCcCCcCCCceEEEEEEeeCCCCCHH
Confidence 9999 99999999999999998764322111 1125789999999 999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcceeeeccCCCCccCCccccccCC--cccccCCCCCcccccccccccccCceeccCccc-ceeec
Q 024502 161 DVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGR--HVLSLHYLTLGRDDFRIFPLRWQRHKIKFGRLK-CIFYL 237 (266)
Q Consensus 161 ~v~~~i~~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~g~--~~~~~~~~~~gg~D~~~~~~~~~~~~v~~G~~~-~~~~~ 237 (266)
++.+++++.++. ++++ ....+||...+++...... ........+.|++|++.+ ..+.+.|||.. ...|.
T Consensus 259 ~~~~~i~~~~~~---~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~tD~~~~----~~p~v~~G~g~~~~~H~ 330 (356)
T 3ct9_A 259 DLFAEIRKHIAC---DAKA-RSFRLNSSRIDEKHPFVQKAVKMGRIPFGSPTLSDQALM----SFASVKIGPGRSSRSHT 330 (356)
T ss_dssp HHHHHHHHHCCS---EEEE-SCSCSCCEECCTTSHHHHHHHHTTCCCEEECSCCGGGGC----CSCEEECCSSBGGGTTS
T ss_pred HHHHHHHHHhhC---eEEE-eeccCCCCCCCCCCHHHHHHHHHhcCCcccccccchhhc----CCCEEEECCCccccCcC
Confidence 999999887754 3332 1135677665555211100 000112346799999943 34567899974 44555
Q ss_pred chhhhhhhhhHHHHHHHHHHHHHh
Q 024502 238 SIYKFISNLFSVLNKSLAAVISRL 261 (266)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~ 261 (266)
.-+......+..+..-+++++.++
T Consensus 331 ~~E~i~~~~l~~~~~~~~~~~~~~ 354 (356)
T 3ct9_A 331 AEEYIMLKEIEEAIGIYLDLLDGL 354 (356)
T ss_dssp TTCEEEHHHHHHHHHHHHHHHTTC
T ss_pred CCcEEEHHHHHHHHHHHHHHHHHh
Confidence 555555566777777777777654
No 11
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=99.95 E-value=1.7e-27 Score=214.14 Aligned_cols=237 Identities=19% Similarity=0.136 Sum_probs=180.7
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCCC---CCceEEeeeeEEEEEEEEecC
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD---KQPCIGTGGMIPWKLHVTGKL 78 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~~---~~i~~~~~g~~~~~i~v~G~~ 78 (266)
+.|++.+.+++++|+|+|++|||.|+ .|++.+++.+.. ++|+++..|++. +.+.++.+|..+++|+++|++
T Consensus 132 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~G~~~~~~~~~~---~~d~~i~~e~~~~~~~~i~~~~~G~~~~~i~v~G~~ 205 (393)
T 1cg2_A 132 KLLKEYGVRDYGTITVLFNTDEEKGS---FGSRDLIQEEAK---LADYVLSFEPTSAGDEKLSLGTSGIAYVQVNITGKA 205 (393)
T ss_dssp HHHHHTTCCCSSEEEEEEESCGGGTT---TTTHHHHHHHHH---HCSEEEECCCEETTSCEEESEECEEEEEEEEEECBC
T ss_pred HHHHhcCCCCCCCEEEEEEcccccCC---ccHHHHHHHHhh---cCCEEEEeCCCCCCCCcEEEeeeeeEEEEEEEEeee
Confidence 56777777788899999999999987 799999986432 468999999863 456778999999999999999
Q ss_pred CCcc-CCCCCCCHHHHHHHHHHHHHHhhccCCCCCCCCccCCcCCCceEeeEEEecCCCccceeCCeEEEEEEEeCCCCC
Q 024502 79 FHSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFY 157 (266)
Q Consensus 79 ~Has-~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~nviP~~a~~~~diR~~~~~ 157 (266)
+|++ .|+.|.||+..+++++.+|+.+.. +.. ..++++|.|+ +|...|+||++|++.+|+|+++.+
T Consensus 206 ~Hag~~p~~g~nAi~~~~~~i~~l~~~~~----~~~---------~~~~~v~~i~-gG~~~NvIP~~a~~~~~iR~~~~~ 271 (393)
T 1cg2_A 206 SHAGAAPELGVNALVEASDLVLRTMNIDD----KAK---------NLRFNWTIAK-AGNVSNIIPASATLNADVRYARNE 271 (393)
T ss_dssp EETTSCGGGSBCHHHHHHHHHHHHGGGCB----TTT---------TEEEEEEEEE-ECSSTTEECSEEEEEEEEEESSHH
T ss_pred cccCCCcccCcCHHHHHHHHHHHHHhhhC----ccc---------CceEEEEEEe-CCCCCCEECcccEEEEEEeeCChh
Confidence 9996 799999999999999999987532 111 5789999999 999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHh-hccee-ee-ccCCCCccCCcc--------c---cccCCcccccCCC-CCccccccccccc-c
Q 024502 158 NVTDVMKRLQEYVDDIN-ENIEK-LD-TRGPVSKYVLPD--------E---NIRGRHVLSLHYL-TLGRDDFRIFPLR-W 221 (266)
Q Consensus 158 ~~~~v~~~i~~~i~~~~-~~~~~-~~-~~~~p~~~~~~~--------~---~~~g~~~~~~~~~-~~gg~D~~~~~~~-~ 221 (266)
+.+++.++|++.++... .++++ ++ ...+||..+++. . +.+|.. . ...+ +.||+|+++|... +
T Consensus 272 ~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~-~-~~~~~~~g~tD~~~~~~~gi 349 (393)
T 1cg2_A 272 DFDAAMKTLEERAQQKKLPEADVKVIVTRGRPAFNAGEGGKKLVDKAVAYYKEAGGT-L-GVEERTGGGTDAAYAALSGK 349 (393)
T ss_dssp HHHHHHHHHHHHHTSCSSTTCEEEEEEEECSCCEECHHHHHHHHHHHHHHHHHTTCC-C-EEESCBSCCCTHHHHGGGSC
T ss_pred hHHHHHHHHHHHHhcccCCCcEEEEEeccccCCccCCcchHHHHHHHHHHHHHhCCC-C-ccccCCCcccHHHHHHhCCC
Confidence 99999999998886522 12222 22 346788876532 1 123432 2 2245 7899999999876 4
Q ss_pred cCceeccCcccceeec-chhhhhhhhhHHHHHHHHHHHHHh
Q 024502 222 QRHKIKFGRLKCIFYL-SIYKFISNLFSVLNKSLAAVISRL 261 (266)
Q Consensus 222 ~~~~v~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 261 (266)
|. .+.|||.....|. .-....-+-+..+...+++++.+|
T Consensus 350 P~-~~~~G~~~~~~H~~~~E~i~~~~l~~~~~~~~~~~~~l 389 (393)
T 1cg2_A 350 PV-IESLGLPGFGYHSDKAEYVDISAIPRRLYMAARLIMDL 389 (393)
T ss_dssp CE-ECCCSCEEECTTSSSCCEEEGGGHHHHHHHHHHHHHHH
T ss_pred CE-EEeCCCCCCCccCCCcceEEehhHHHHHHHHHHHHHHH
Confidence 53 3479997655566 444455556677777888888776
No 12
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=99.94 E-value=6.6e-27 Score=211.32 Aligned_cols=240 Identities=16% Similarity=0.126 Sum_probs=178.9
Q ss_pred hhhhcccCCCCceEEEEEEcCCCC-----CCCCCchHHHHH------------Hccc---------------c-----CC
Q 024502 2 RKLGETKLKLKSTVIAVFIASEEN-----SAITGVGVDALV------------KDGL---------------L-----NK 44 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~-----g~~~~~Ga~~~i------------~~g~---------------~-----~~ 44 (266)
+.|++.+.+++++|.|+|+++||. |. .|++.++ ++|. + +.
T Consensus 103 ~~l~~~~~~~~~~i~~~~~~~EE~~~~~~g~---~Gs~~~~~~~~~~~~~~~~~~G~~~~~~l~~~G~~~~~~~~~~~~~ 179 (408)
T 3n5f_A 103 QTMNEHGVVTHHPIEVVAFTDEEGARFRFGM---IGSRAMAGTLPPEALECRDAEGISLAEAMKQAGLDPDRLPQAARKP 179 (408)
T ss_dssp HHHHHTTCCCSSCEEEEEESCSSCTTTTCCC---HHHHHHHTCCCGGGGSCBCTTCCBHHHHHHHTTCCGGGGGGGCCCT
T ss_pred HHHHHcCCCCCCCEEEEEEcCccccccCCCC---cCHHHHHcCCCHHHhhccCCCCCCHHHHHHHhCCChhhhhhcccCc
Confidence 567788878999999999999996 33 6999997 2221 1 11
Q ss_pred CCCCcEEEEeCCCC--------C--ceEEeeeeEEEEEEEEecCCCc-cCC-CCCCCHHHHHHHHHHHHHHhhccCCCCC
Q 024502 45 LKGGPLYWIDTADK--------Q--PCIGTGGMIPWKLHVTGKLFHS-GLP-HKAINPLELAMEALKVIQTRFYKDFPPH 112 (266)
Q Consensus 45 ~~~d~~i~~e~~~~--------~--i~~~~~g~~~~~i~v~G~~~Ha-s~P-~~g~nAi~~~a~~i~~l~~~~~~~~~~~ 112 (266)
.++|+++..|+.++ . +..+++|..+++|+++|+++|+ +.| +.|+||+.++++++.+|+.+. +..+
T Consensus 180 ~~~~~~~~lhi~~g~~le~~~~~~gi~~~~~g~~~~~i~v~G~~~Hags~P~~~g~nAi~~aa~~i~~l~~~~-~~~~-- 256 (408)
T 3n5f_A 180 GTVKAYVELHIEQGRVLEETGLPVGIVTGIAGLIWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEA-RRTG-- 256 (408)
T ss_dssp TTEEEEEEEEECSSSHHHHHTCSEEEEEEECEEEEEEEEEECCCEETTTSCTTTCCCHHHHHHHHHHHHHHHH-HHHS--
T ss_pred cCccEEEEEeeccchhHHHcCCCeEEEEEeccceEEEEEEEEEcCcCCCCccccccCHHHHHHHHHHHHHHHH-HhcC--
Confidence 14567788886543 2 2347999999999999999999 689 589999999999999998864 2222
Q ss_pred CCCccCCcCCCceEeeEEEecCC-CccceeCCeEEEEEEEeCCCCCCHHHHHHHHHHHHHHHhhc--cee-ee-ccCCCC
Q 024502 113 PKEQVYGFETPSTMKPTQWSYPG-GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINEN--IEK-LD-TRGPVS 187 (266)
Q Consensus 113 ~~~~~~~~~~~~t~~~g~i~~gg-~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~i~~~~~~--~~~-~~-~~~~p~ 187 (266)
.+++++|.|+ +| +..|+||++|++.+|+|+++.++.+++.++|++.++..+.. +++ ++ ...+|+
T Consensus 257 ----------~~~~~vg~i~-gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~~i~~~~~~p~ 325 (408)
T 3n5f_A 257 ----------TTVGTVGQLH-VYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAKERNVRVTTERLQEMPP 325 (408)
T ss_dssp ----------SCEEEEEEEE-EESCCTTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEECC
T ss_pred ----------CcEEEEEEEE-ecCCCCcCcCCeEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecCCCC
Confidence 4689999999 65 89999999999999999999999999999999999876532 322 22 345777
Q ss_pred ccCCcc-----cc---ccCCcccccCCCCCcccccccccccccCceeccCccc-ceeecchhhhhhhhhHHHHHHHHHHH
Q 024502 188 KYVLPD-----EN---IRGRHVLSLHYLTLGRDDFRIFPLRWQRHKIKFGRLK-CIFYLSIYKFISNLFSVLNKSLAAVI 258 (266)
Q Consensus 188 ~~~~~~-----~~---~~g~~~~~~~~~~~gg~D~~~~~~~~~~~~v~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (266)
+.+|+. .+ ..|... ...+++||+|+++|++.+|. .+.|+|.. ...|...+....+-+..+...+++++
T Consensus 326 ~~~d~~l~~~~~~a~~~~g~~~--~~~~~~ggtD~~~~~~~iP~-~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~~ 402 (408)
T 3n5f_A 326 VLCSDEVKRAAEAACQKLGYPS--FWLPSGAAHDSVQLAPICPI-GMIFVRSQDGVSHSPAEWSTKEDCAAGAEVLYHTV 402 (408)
T ss_dssp EECCHHHHHHHHHHHHHHTCCC--CEEEESSCCTTTTTTTTSCE-EEEEECCGGGCCSSTTCCCCHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHcCCCc--ccCCCcCchHHHHHHHHCCE-EEEEeCCCCCCCCCccccCCHHHHHHHHHHHHHHH
Confidence 877766 11 124321 12457899999999987553 35566654 34556665566666788888888888
Q ss_pred HHh
Q 024502 259 SRL 261 (266)
Q Consensus 259 ~~~ 261 (266)
.+|
T Consensus 403 ~~l 405 (408)
T 3n5f_A 403 WQL 405 (408)
T ss_dssp HHH
T ss_pred HHH
Confidence 776
No 13
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=99.94 E-value=2.3e-27 Score=211.36 Aligned_cols=231 Identities=15% Similarity=0.151 Sum_probs=171.8
Q ss_pred hhhhcccCCC---Cce--EEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEE---eCCCCCceEEeeeeEEEEEE
Q 024502 2 RKLGETKLKL---KST--VIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWI---DTADKQPCIGTGGMIPWKLH 73 (266)
Q Consensus 2 k~L~~~~~~~---~~~--v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~---e~~~~~i~~~~~g~~~~~i~ 73 (266)
+.|++.+.++ +++ |+|+|++|||.++. .|++.+++.+ ++|+++.. +|++ +.++++|..+++|+
T Consensus 113 ~~l~~~~~~~~~~~g~~~v~~~~~~~EE~~g~--~G~~~~~~~~-----~~d~~i~~d~~~p~~--i~~~~~G~~~~~i~ 183 (364)
T 2rb7_A 113 RDRLNALKAAGRSQKDMALGLLITGDEEIGGM--NGAAKALPLI-----RADYVVALDGGNPQQ--VITKEKGIIDIKLT 183 (364)
T ss_dssp HHHHHHHHHTTCCGGGCCEEEEEESCGGGTST--TTHHHHGGGC-----EEEEEEECSSSBTTE--EEEEECEEEEEEEE
T ss_pred HHHHHhCCCCcccCCCccEEEEEEeccccCch--hhHHHHHhcC-----CCCEEEEccCCcccc--eEEEeeeEEEEEEE
Confidence 4566655555 578 99999999997421 6999998865 45677773 3443 77889999999999
Q ss_pred EEecCCCccCCCCCCCHHHHHHHHHHHHHHhhccCCCCCCCCccCCcCCCceEeeEEEecCCCccceeCCeEEEEEEEeC
Q 024502 74 VTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (266)
Q Consensus 74 v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~nviP~~a~~~~diR~ 153 (266)
++|+++|++.|+.|+||+..+++++.+++.++. ++.. ..+..++++|.|+ +|...|+||++|++++|+|+
T Consensus 184 v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~---~~~~------~~~~~~~~vg~i~-gG~~~NviP~~a~~~~~iR~ 253 (364)
T 2rb7_A 184 CTGKAAHGARPWMGVNAVDLLMEDYTRLKTLFA---EENE------DHWHRTVNLGRIR-AGESTNKVPDVAEGWFNIRV 253 (364)
T ss_dssp EECBCEETTSGGGSBCHHHHHHHHHHHHHTTSC---CCCT------TCCSCEEEEEEEE-ECSCTTEECSEEEEEEEEEE
T ss_pred EEeecccCCCCCCCcCHHHHHHHHHHHHHhhcc---chhh------cCCCceEEEEEEe-cCCcCcccCcceEEEEEEee
Confidence 999999999999999999999999999987521 1100 0024689999999 99999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhcceeeeccCCCCccCCccc-------cccCCcccccCCCCCcccccccccccccCcee
Q 024502 154 TPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDE-------NIRGRHVLSLHYLTLGRDDFRIFPLRWQRHKI 226 (266)
Q Consensus 154 ~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~p~~~~~~~~-------~~~g~~~~~~~~~~~gg~D~~~~~~~~~~~~v 226 (266)
++.++.+++.+++++.++. +++ ...+||..++++. ++... . ..++.|++|+++|.+ ...+.+
T Consensus 254 ~~~~~~~~i~~~i~~~~~~---~v~---~~~~~~~~~~~~~~l~~~~~~~~~~--~--g~~~~g~~D~~~~~~-~~~p~v 322 (364)
T 2rb7_A 254 TEHDDPGALIDKIRKTVSG---TVS---IVRTVPVFLAADSPYTERLLALSGA--T--AGKAHGASDARYLGE-NGLTGV 322 (364)
T ss_dssp CTTSCHHHHHHHHHHHCSS---EEE---EEEEECCEECCCCHHHHHHHHHHCC--E--EEEESSCCGGGGTGG-GTCCEE
T ss_pred CCCCCHHHHHHHHHHHhhh---hEE---eccCCccccCCCCHHHHHHHHHHHh--c--CCCCCCCchHHHHHh-cCCCEE
Confidence 9999999999999887754 333 1235556655542 11111 1 123688999999987 234567
Q ss_pred ccCcccc-eeecchhhhhhhhhHHHHHHHHHHHHHhh
Q 024502 227 KFGRLKC-IFYLSIYKFISNLFSVLNKSLAAVISRLQ 262 (266)
Q Consensus 227 ~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (266)
.|||... ..|..-+....+.+..+..-+++++.++.
T Consensus 323 ~~Gp~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 359 (364)
T 2rb7_A 323 VWGAEGFNTLHSRDECLHIPSLQSIYDPLMQLAREME 359 (364)
T ss_dssp ECCCCCTTCTTSTTCEEETTHHHHHHHHHHHHHHHHH
T ss_pred EECCCCccccCCCCccccHHHHHHHHHHHHHHHHHHH
Confidence 7999764 44566555666667788888888887764
No 14
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=99.94 E-value=7.1e-27 Score=210.34 Aligned_cols=235 Identities=13% Similarity=0.152 Sum_probs=179.6
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCC--CCCceEEeeeeEEEEEEEEecCC
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA--DKQPCIGTGGMIPWKLHVTGKLF 79 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~--~~~i~~~~~g~~~~~i~v~G~~~ 79 (266)
+.|++.+ .++++|.|+|++|||.|+ .|++.|++++ +++|+.+..++. .+.+.++.+|..+++|+++|+++
T Consensus 142 ~~l~~~~-~~~~~v~~~~~~~EE~g~---~Ga~~~~~~~----~~~~~~~~~~~~~~~g~i~~~~~g~~~~~i~v~G~~~ 213 (396)
T 3rza_A 142 QVIKEQQ-IPHGQIQFVITVGEESGL---IGAKELNSEL----LDADFGYAIDASADVGTTVVGAPTQMLISAKIIGKTA 213 (396)
T ss_dssp HHHHHHT-CCCCCEEEEEESCGGGTS---HHHHHCCGGG----CCCSEEEEEEESSCTTCEEEEECEEEEEEEEEECBCC
T ss_pred HHHHhcC-CCCCCEEEEEEccccccc---HhHhhhchhh----cccceEEEEecCCCcceEEEcCCceEEEEEEEEeEec
Confidence 4566665 368999999999999987 7999986543 456788877765 35678889999999999999999
Q ss_pred CccCCCCCCCHHHHHHHHHHHHHHhhccCCCCCCCCccCCcCCCceEeeEEEecCCCccceeCCeEEEEEEEeCCCCCCH
Q 024502 80 HSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNV 159 (266)
Q Consensus 80 Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~nviP~~a~~~~diR~~~~~~~ 159 (266)
|++.|+.|+||+..+++++.+|+.. ..++ ..++++|.|+ +|+..|+||++|++.+|+|+.+.++.
T Consensus 214 Ha~~p~~g~nai~~~~~~i~~l~~~---~~~~-----------~~~~~vg~i~-gG~~~NvIP~~a~~~~diR~~~~~~~ 278 (396)
T 3rza_A 214 HASTPKEGVSAINIAAKAISRMKLG---QVDE-----------ITTANIGKFH-GGSATNIVADEVILEAEARSHDPERI 278 (396)
T ss_dssp BTTSGGGSBCHHHHHHHHHHHSCCE---EEET-----------TEEEEEEEEE-ECSCTTBCCCEEEEEEEEEESSHHHH
T ss_pred CCCCccccccHHHHHHHHHHhcccC---CCCC-----------CceeeeeEEe-cCCCCcccCceEEEEEEEEeCCHHHH
Confidence 9999999999999999999987642 1222 4688999999 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhc--cee-ee-ccCCCCccCCcc-------c---cccCCcccccCCCCCcccccccccccccCce
Q 024502 160 TDVMKRLQEYVDDINEN--IEK-LD-TRGPVSKYVLPD-------E---NIRGRHVLSLHYLTLGRDDFRIFPLRWQRHK 225 (266)
Q Consensus 160 ~~v~~~i~~~i~~~~~~--~~~-~~-~~~~p~~~~~~~-------~---~~~g~~~~~~~~~~~gg~D~~~~~~~~~~~~ 225 (266)
+++.++|++.++..+.. +.+ ++ ...+||+..+++ . +.+|.. ....++.||+|+++|.+. ..+.
T Consensus 279 ~~~~~~i~~~~~~~a~~~g~~~~i~~~~~~p~~~~~~d~~l~~~~~~~~~~~g~~--~~~~~~~g~tD~~~~~~~-giP~ 355 (396)
T 3rza_A 279 KTQVKHMTDVFETTASELGGKAEVTVEQSYPGFKINDNEAVVKIAQESARNLGLS--ANTIISGGGSDGSIINTF-GIPS 355 (396)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEEEEEECCEECCTTSHHHHHHHHHHHHTTCC--CCEEECSSCCHHHHHGGG-TCCE
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEEEeccCCcccCCCcHHHHHHHHHHHHcCCC--ceecccceeccHHHHhhC-CCcE
Confidence 99999999998876533 222 22 345677754333 1 113432 122457899999999865 3445
Q ss_pred eccCcccceeecchhhhhhhhhHHHHHHHHHHHHHhh
Q 024502 226 IKFGRLKCIFYLSIYKFISNLFSVLNKSLAAVISRLQ 262 (266)
Q Consensus 226 v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (266)
+.|||.....|.......-.-+..+..-+++++.++.
T Consensus 356 ~~~g~g~~~~H~~~E~v~~~~l~~~~~~~~~~~~~l~ 392 (396)
T 3rza_A 356 VILGVGYEKIHTTNERMPIKSLNLLASQVLEIIKIVA 392 (396)
T ss_dssp EEEECCCBSTTSTTCEEEHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCcceeEHHHHHHHHHHHHHHHHHHH
Confidence 6788887555666666666677788888888887774
No 15
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=99.94 E-value=6.7e-27 Score=208.77 Aligned_cols=235 Identities=14% Similarity=0.143 Sum_probs=177.6
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCCC--CCceEEeeeeEEEEEEEEecCC
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD--KQPCIGTGGMIPWKLHVTGKLF 79 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~~--~~i~~~~~g~~~~~i~v~G~~~ 79 (266)
+.|++.+. ++++|.|+|++|||.|+ .|++.|.++ ++++|+++..++.. +.+.++.+|..+++|+++|+++
T Consensus 121 ~~l~~~~~-~~~~v~~~~~~~EE~g~---~Ga~~~~~~----~~~~~~~~~~~~~~~~g~i~~~~~g~~~~~i~~~G~~~ 192 (373)
T 3gb0_A 121 RVLKEKNI-PHGTIEFIITVGEESGL---VGAKALDRE----RITAKYGYALDSDGKVGEIVVAAPTQAKVNAIIRGKTA 192 (373)
T ss_dssp HHHHHTTC-CCCCEEEEEESCGGGTS---HHHHHSCGG----GCCCSEEEEEEECSCTTEEEEEECEEEEEEEEEECBCC
T ss_pred HHHHhcCC-CCCCEEEEEEeccccCc---hhhhhhCHH----hcCCCEEEEEcCCCCCCeEEEcCCCcEEEEEEEEeEec
Confidence 45666664 78999999999999987 799998643 34667888887653 5677889999999999999999
Q ss_pred Ccc-CCCCCCCHHHHHHHHHHHHHHhhccCCCCCCCCccCCcCCCceEeeEEEecCCCccceeCCeEEEEEEEeCCCCCC
Q 024502 80 HSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYN 158 (266)
Q Consensus 80 Has-~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~nviP~~a~~~~diR~~~~~~ 158 (266)
|++ .|+.|+||+..+++++.+|+.. ..++ ..++++|.|+ +|+..|+||++|++.+|+|+.+.++
T Consensus 193 Ha~~~p~~g~nai~~~~~~i~~l~~~---~~~~-----------~~~~~vg~i~-gG~~~Nvip~~~~~~~d~R~~~~~~ 257 (373)
T 3gb0_A 193 HAGVAPEKGVSAITIAAKAIAKMPLG---RIDS-----------ETTANIGRFE-GGTQTNIVCDHVQIFAEARSLINEK 257 (373)
T ss_dssp BTTTCGGGSBCHHHHHHHHHTTSCCE---EEET-----------TEEEEEEEEE-ECSCTTBCCCEEEEEEEEEESSHHH
T ss_pred CCCCChhhCcCHHHHHHHHHHhcccc---cCCC-----------ccccceeEEe-cCcccccccceEEEEEEEecCCHHH
Confidence 999 8999999999999999877542 1222 4688999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhc--cee-ee-ccCCCCccCCcc-------c---cccCCcccccCCCCCcccccccccccccCc
Q 024502 159 VTDVMKRLQEYVDDINEN--IEK-LD-TRGPVSKYVLPD-------E---NIRGRHVLSLHYLTLGRDDFRIFPLRWQRH 224 (266)
Q Consensus 159 ~~~v~~~i~~~i~~~~~~--~~~-~~-~~~~p~~~~~~~-------~---~~~g~~~~~~~~~~~gg~D~~~~~~~~~~~ 224 (266)
.+++.+++++.++..+.. +.+ ++ ...+||...+++ . +.+|.. ....++.||+|+++|.+. ..+
T Consensus 258 ~~~~~~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~--~~~~~~~g~~D~~~~~~~-gip 334 (373)
T 3gb0_A 258 MEAQVAKMKEAFETTAKEMGGHADVEVNVMYPGFKFADGDHVVEVAKRAAEKIGRT--PSLHQSGGGSDANVIAGH-GIP 334 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEEEEEEEECCEECCTTCHHHHHHHHHHHHTTCC--CEEEECSSCCHHHHHHHT-TCC
T ss_pred HHHHHHHHHHHHHHHHHhcCCeEEEEEecccCCcccCCCCHHHHHHHHHHHHhCCC--ceEecccCcchHHHHHhC-CCC
Confidence 999999999998876543 222 22 345677654333 1 113432 122457899999999865 244
Q ss_pred eeccCcccceeecchhhhhhhhhHHHHHHHHHHHHHhh
Q 024502 225 KIKFGRLKCIFYLSIYKFISNLFSVLNKSLAAVISRLQ 262 (266)
Q Consensus 225 ~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (266)
.+.|||.....|.......-+-+..+..-+++++.++|
T Consensus 335 ~~~~g~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~ 372 (373)
T 3gb0_A 335 TVNLAVGYEEIHTTNEKIPVEELAKTAELVVAIIEEVA 372 (373)
T ss_dssp EEEEECCCBSTTSTTCEEEHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCcCcCCceEEEHHHHHHHHHHHHHHHHHhh
Confidence 56788877555555555566667777888888887763
No 16
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=99.93 E-value=1.7e-25 Score=206.41 Aligned_cols=252 Identities=15% Similarity=0.062 Sum_probs=183.5
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCC--CCCcEEEEeCCC-----CCceEEeeeeEEEEEEE
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKL--KGGPLYWIDTAD-----KQPCIGTGGMIPWKLHV 74 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~--~~d~~i~~e~~~-----~~i~~~~~g~~~~~i~v 74 (266)
++|++.+.+++++|+|+|++|||+|+ .|++.|++++. +++ ++|++++.|+.. ..+.++.+|..+++|++
T Consensus 156 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~g~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v 231 (485)
T 3dlj_A 156 SAFRALEQDLPVNIKFIIEGMEEAGS---VALEELVEKEK-DRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEV 231 (485)
T ss_dssp HHHHHTTCCCSSEEEEEEESCGGGTT---TTHHHHHHHHT-TTTSTTCCEEEECCCBCCC--CCEEEEEECEEEEEEEEE
T ss_pred HHHHHhCCCCCccEEEEEEcccccCC---ccHHHHHHhhh-hhcccCCCEEEEcCCCccCCCCeeEEEeccceEEEEEEE
Confidence 56778888899999999999999987 79999998763 111 468999999742 23567899999999999
Q ss_pred EecCC--CccCCCCCCCHHHHHHHHHHHHHHhhccC-----------CCCCCC-----CccCCc----------------
Q 024502 75 TGKLF--HSGLPHKAINPLELAMEALKVIQTRFYKD-----------FPPHPK-----EQVYGF---------------- 120 (266)
Q Consensus 75 ~G~~~--Has~P~~g~nAi~~~a~~i~~l~~~~~~~-----------~~~~~~-----~~~~~~---------------- 120 (266)
+|+++ |++. .|.||+..++.++..|+.+..+. +.|... .....+
T Consensus 232 ~G~~~~~H~~~--~g~~a~~~~~~l~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 309 (485)
T 3dlj_A 232 KCRDQDFHSGT--FGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLF 309 (485)
T ss_dssp ESCSSCEETTT--STTSSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCSC
T ss_pred EECCCCCcCCC--CCccccCHHHHHHHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCcccc
Confidence 99999 9997 36666666666666665543221 111000 000000
Q ss_pred ----------CCCceEeeEEEecCC----CccceeCCeEEEEEEEeCCCCCCHHHHHHHHHHHHHHHhhcc----ee-ee
Q 024502 121 ----------ETPSTMKPTQWSYPG----GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENI----EK-LD 181 (266)
Q Consensus 121 ----------~~~~t~~~g~i~~gg----~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~i~~~~~~~----~~-~~ 181 (266)
+...+++++.|+ +| +..|+||++|++.+|+|+.+.++.+++.++|++.++..+... ++ ++
T Consensus 310 ~~~~~~~~~~~~~~~~~v~~i~-gG~~gp~a~NVIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~~~~v~ 388 (485)
T 3dlj_A 310 DTKEEILMHLWRYPSLSIHGIE-GAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSKRNSSNKMVVS 388 (485)
T ss_dssp SSHHHHHHHHHTSCEEEEEEEE-SSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCSSEEEEE
T ss_pred cchHHHHHHHhcCCceEEEEEe-cCCcCCCCCceeCCeeEEEEEEEcCCCCCHHHHHHHHHHHHHHhccccCCCeeEEEE
Confidence 014679999999 88 899999999999999999999999999999999999876432 22 33
Q ss_pred -ccCCCCccCCcc-----------ccccCCcccccCCCCCcccccc-cccccccCceeccCcc--cceeecchhhhhhhh
Q 024502 182 -TRGPVSKYVLPD-----------ENIRGRHVLSLHYLTLGRDDFR-IFPLRWQRHKIKFGRL--KCIFYLSIYKFISNL 246 (266)
Q Consensus 182 -~~~~p~~~~~~~-----------~~~~g~~~~~~~~~~~gg~D~~-~~~~~~~~~~v~~G~~--~~~~~~~~~~~~~~~ 246 (266)
...+||+.++++ .+++|...+. .++.|++||+ +|.+.++...+.+|.. ....|..-+.+...-
T Consensus 389 ~~~~~pp~~~~~d~~~~~~~~~a~~~~~G~~~~~--~~~ggs~Dfa~~~~~~~p~~~i~~g~g~~~~~~H~p~E~i~~~~ 466 (485)
T 3dlj_A 389 MTLGLHPWIANIDDTQYLAAKRAIRTVFGTEPDM--IRDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWN 466 (485)
T ss_dssp EEEEECCEECCTTSHHHHHHHHHHHHHHSSCCEE--EEESSCCHHHHHHHHHTC--CEECCCBCTTCCTTSTTCEEEHHH
T ss_pred EcCCCCceeCCCCCHHHHHHHHHHHHHhCCCcee--cCCCCchhHHHHHHHHhCCCEEEecCCCCCCCCcCCCCCccHHH
Confidence 345788888875 1335543222 2467899974 7877777777766654 456778888888889
Q ss_pred hHHHHHHHHHHHHHhh
Q 024502 247 FSVLNKSLAAVISRLQ 262 (266)
Q Consensus 247 ~~~~~~~~~~~~~~~~ 262 (266)
+..+...+++++.+|-
T Consensus 467 l~~g~~~l~~~l~~la 482 (485)
T 3dlj_A 467 YIEGTKLFAAFFLEMA 482 (485)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998763
No 17
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=99.92 E-value=2.9e-25 Score=201.38 Aligned_cols=245 Identities=16% Similarity=0.088 Sum_probs=176.9
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCC--CCchHHHHHH----ccccC----------------CC-----------CCC
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAI--TGVGVDALVK----DGLLN----------------KL-----------KGG 48 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~--~~~Ga~~~i~----~g~~~----------------~~-----------~~d 48 (266)
+.|++.+.+++++|+|+|++|||++.- ...|++.|.+ ++.++ ++ ++|
T Consensus 107 ~~l~~~~~~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~G~~~~~~~p~~~~~~~ 186 (423)
T 1z2l_A 107 DWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIK 186 (423)
T ss_dssp HHHHHHHCSCSEEEEEEEESCSSCCSSSCSCHHHHHHTTCCCGGGTSSCCCSSSCCHHHHHHHTTCCCCSSCCCCCCCEE
T ss_pred HHHHHcCCCCCCCEEEEEEcCccccccCCCcccHHHHHcCCCHHHHhhhcCcCCcCHHHHHHHcCCccccccccCCCCce
Confidence 567777878999999999999998420 0048999886 22211 11 235
Q ss_pred cEEEEeCCCC----------CceEEeeeeEEEEEEEEecCCCcc-CCC-CCCCHHHHHHHHHHHHHHhhccCCCCCCCCc
Q 024502 49 PLYWIDTADK----------QPCIGTGGMIPWKLHVTGKLFHSG-LPH-KAINPLELAMEALKVIQTRFYKDFPPHPKEQ 116 (266)
Q Consensus 49 ~~i~~e~~~~----------~i~~~~~g~~~~~i~v~G~~~Has-~P~-~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~ 116 (266)
+++..|..++ .+..+.+|..+++|+++|+++|++ .|+ .|.||+..+++++.+|+.+..+ .++
T Consensus 187 ~~~~~h~~~~~~~e~~~~~~~~~~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~~a~~i~~l~~~~~~-~~~----- 260 (423)
T 1z2l_A 187 AFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKR-MGD----- 260 (423)
T ss_dssp EEEEEEECCSSHHHHTTCCEEEEEEECEEEEEEEEEECCCEETTTSCGGGCCCHHHHHHHHHHHHHHHHHH-HCT-----
T ss_pred EEEEEEeccCchHHHCCCCeEEEeeEecceEEEEEEEeEcCCCCCCccccCcCHHHHHHHHHHHHHHHHHh-cCC-----
Confidence 6676765543 234578999999999999999999 795 8999999999999999876432 222
Q ss_pred cCCcCCCceEeeEEEecCC-CccceeCCeEEEEEEEeCCCCCCHHHHHHHHHHHHHHHhh--ccee-ee-ccCCCCccCC
Q 024502 117 VYGFETPSTMKPTQWSYPG-GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINE--NIEK-LD-TRGPVSKYVL 191 (266)
Q Consensus 117 ~~~~~~~~t~~~g~i~~gg-~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~i~~~~~--~~~~-~~-~~~~p~~~~~ 191 (266)
..++++|.|+ +| +..|+||++|++.+|+|+++.++.+++.++|++.+++.+. ++++ ++ ...+||+.++
T Consensus 261 ------~~~~~vg~i~-gg~~~~NvIP~~a~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 333 (423)
T 1z2l_A 261 ------PLVLTFGKVE-PRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMN 333 (423)
T ss_dssp ------TCEEECCCEE-EESCCTTEECCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEECCEECC
T ss_pred ------CceEEEEEEe-ecCCcceeECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecCCCCccCC
Confidence 3588999998 65 8999999999999999999999999999999999887643 2332 22 3456777777
Q ss_pred cc-----c---cccCCcccccCCCCCcccccccccccccCceeccCccc-ceeecchhhhhhhhhHHHHHHHHHHHHHhh
Q 024502 192 PD-----E---NIRGRHVLSLHYLTLGRDDFRIFPLRWQRHKIKFGRLK-CIFYLSIYKFISNLFSVLNKSLAAVISRLQ 262 (266)
Q Consensus 192 ~~-----~---~~~g~~~~~~~~~~~gg~D~~~~~~~~~~~~v~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (266)
+. . +..|.. . ...++.||+|+++|.+.+| ..+.|||.. ...|..-....-+-+..+..-+++++.++.
T Consensus 334 ~~l~~~~~~~~~~~g~~-~-~~~~~~ggtD~~~~~~~~p-~~~~~~p~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~ 410 (423)
T 1z2l_A 334 KELVATLTELCEREKLN-Y-RVMHSGAGHDAQIFAPRVP-TCMIFIPSINGISHNPAERTNITDLAEGVKTLALMLYQLA 410 (423)
T ss_dssp HHHHHHHHHHHHHTTCC-E-EEEEESSCCTHHHHTTTSC-EEEEEECCGGGCCSSTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCC-e-EEecCCCcccHHHHHhhCC-EEEEEeCCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 65 1 112432 1 2346789999999998754 345688875 344555555555566777777888877763
No 18
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=99.92 E-value=5.7e-25 Score=202.67 Aligned_cols=253 Identities=15% Similarity=0.118 Sum_probs=175.1
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCC-CCcEEEEeCCC---C--CceEEeeeeEEEEEEEE
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLK-GGPLYWIDTAD---K--QPCIGTGGMIPWKLHVT 75 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~-~d~~i~~e~~~---~--~i~~~~~g~~~~~i~v~ 75 (266)
+.|++.+..++++|+|+|++|||+|+ .|++.+++++. +.++ +|++++.+++. + .+.++++|..+++|+++
T Consensus 160 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~g~~~~~~~~~-~~~~~~d~~i~~~~~~~~~~~~~i~~~~~G~~~~~i~v~ 235 (481)
T 2pok_A 160 RKYMQHHDDLPVNISFIMEGAEESAS---TDLDKYLEKHA-DKLRGADLLVWEQGTKNALEQLEISGGNKGIVTFDAKVK 235 (481)
T ss_dssp HHHHHTCSSCSSEEEEEEESCGGGTT---TTHHHHHHHHH-HHHTTCSEEECSCCBBCTTSCEEEECCBCEEEEEEEEEE
T ss_pred HHHHHhcCCCCCCEEEEEecccccCc---hhHHHHHHHhH-hhccCCCEEEECCCCccCCCCeeEEEecceeEEEEEEEe
Confidence 45666655788999999999999987 79999887642 1123 68888887643 1 34567999999999999
Q ss_pred ecC--CCccCCCCCCCHHHHHHHHHHHHHHhhcc--------CCCCC--------------CC------------Cc-cC
Q 024502 76 GKL--FHSGLPHKAINPLELAMEALKVIQTRFYK--------DFPPH--------------PK------------EQ-VY 118 (266)
Q Consensus 76 G~~--~Has~P~~g~nAi~~~a~~i~~l~~~~~~--------~~~~~--------------~~------------~~-~~ 118 (266)
|++ +|++.|+.|.||+..+++++.+|+....+ ...+. +. .. ..
T Consensus 236 G~~g~~Hss~p~~g~nAi~~~a~~i~~l~~~~~~i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (481)
T 2pok_A 236 SADVDIHSSYGGVVESAPWYLLQALQSLRAADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEE 315 (481)
T ss_dssp CSSSCEEGGGTTTBCCHHHHHHHHHHHTBCTTSCBCCTTTGGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCS
T ss_pred cCCCCccccCCCCCCCHHHHHHHHHHHhhCCCCceeccchhhcCCCCCHHHHHHHHhcCcccHHHHHHhhCccccccccc
Confidence 999 89999999999999999999988653200 00000 00 00 00
Q ss_pred C------cCCCceEeeEEEecCCC----ccceeCCeEEEEEEEeCCCCCCHHHHHHHHHHHHHHHhh-cceeeeccCCCC
Q 024502 119 G------FETPSTMKPTQWSYPGG----GINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINE-NIEKLDTRGPVS 187 (266)
Q Consensus 119 ~------~~~~~t~~~g~i~~gg~----~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~i~~~~~-~~~~~~~~~~p~ 187 (266)
+ .....++++|.|+ +|. ..|+||++|++.+|+|+++.++.+++.++|++.++..+. ++++.....+|+
T Consensus 316 g~~~~~~~~~~~t~~vg~i~-gG~~~~~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~v~~~~~~p~ 394 (481)
T 2pok_A 316 RMAFLKRFFFDPALNIEGIQ-SGYQGQGVKTILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGFDKVELYYTLGEMS 394 (481)
T ss_dssp HHHHHHHHHHSCEEEEEEEE-EECCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHTTCTTEEEEEEEEECC
T ss_pred chhHHHHHhhcCeEeEEeee-cCCCCCCCCeeccCeeEEEEEEEeCCCCCHHHHHHHHHHHHHhhCCCceEEEEccCCCc
Confidence 0 0124689999998 765 689999999999999999999999999999999987642 233211235667
Q ss_pred ccCCcc-----------ccccCCcccccCCCCCccc-ccccccccccCceeccCccc--ceeecchhhhhhhhhHHHHHH
Q 024502 188 KYVLPD-----------ENIRGRHVLSLHYLTLGRD-DFRIFPLRWQRHKIKFGRLK--CIFYLSIYKFISNLFSVLNKS 253 (266)
Q Consensus 188 ~~~~~~-----------~~~~g~~~~~~~~~~~gg~-D~~~~~~~~~~~~v~~G~~~--~~~~~~~~~~~~~~~~~~~~~ 253 (266)
+.++++ ++.+|...+ . .+..||+ |+++|.+....+.+.|||.. ...|..-....-+-+..+...
T Consensus 395 ~~~~~d~~l~~~~~~a~~~~~g~~~~-~-~~~~gg~~D~~~~~~~~g~p~v~~G~g~~~~~~H~~~E~i~i~~l~~~~~~ 472 (481)
T 2pok_A 395 YRSDMSAPAILNVIELAKKFYPQGVS-V-LPTTAGTGPMHTVFDALEVPMVAFGLGNANSRDHGGDENVRIADYYTHIEL 472 (481)
T ss_dssp BCCCSCSHHHHHHHHHHTTTCTTCEE-E-ESCBSSCCTHHHHHHHHCCCEEBCCSBCTTCCTTSTTCEEEHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCCcc-c-cccCCCCCchHHHHHHcCCCEEEecCCCcccCCCCCCCcEEHHHHHHHHHH
Confidence 766555 123454321 1 2345555 99999876445678899974 334444444445556667777
Q ss_pred HHHHHHHh
Q 024502 254 LAAVISRL 261 (266)
Q Consensus 254 ~~~~~~~~ 261 (266)
+++++.++
T Consensus 473 ~~~~l~~l 480 (481)
T 2pok_A 473 VEELIRSY 480 (481)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhc
Confidence 77777654
No 19
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=99.92 E-value=8.8e-26 Score=205.57 Aligned_cols=231 Identities=12% Similarity=-0.011 Sum_probs=167.5
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCCC-CCceEEeeeeEEEEEEEEecCCC
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD-KQPCIGTGGMIPWKLHVTGKLFH 80 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~~-~~i~~~~~g~~~~~i~v~G~~~H 80 (266)
+.|++.+..++++|.|+|++|||+| .|++.|.... +++|+++..|+.+ +.+.++.+|..+++|+++|+++|
T Consensus 179 ~~L~~~~~~~~~~i~~if~~~EE~g----~Ga~~~~~~~----~~~d~~~~~d~~~~g~i~~~~~G~~~~~i~v~G~~~H 250 (434)
T 3ife_A 179 NYLIHNPQIKHGKIRVAFTPDEEIG----RGPAHFDVEA----FGASFAYMMDGGPLGGLEYESFNAAGAKLTFNGTNTH 250 (434)
T ss_dssp HHHHTCTTSCBCCEEEEEESCGGGT----CTGGGCCHHH----HCCSEEEECCCCSTTEEECCBCEEEEEEEEEECBCCC
T ss_pred HHHHhCCCCCCCCEEEEEECCcccC----hHHHHhhhhh----cCCCEEEEecCCCCCceeecCCCeEEEEEEEEEEecC
Confidence 5677887789999999999999997 4888875332 3578999999764 56778899999999999999999
Q ss_pred cc-CCCCCCCHHHHHHHHHHHHHHhhccCCCCCCCCccCCcCCCceEeeEEEecCCCccceeCCeEEEEEEEeCCCCCCH
Q 024502 81 SG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNV 159 (266)
Q Consensus 81 as-~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~nviP~~a~~~~diR~~~~~~~ 159 (266)
++ .|+.|+||+.++++++.+|+... . +. .++.++|.++ + +..|+||++|++.+|+|+.+.++.
T Consensus 251 ag~~P~~g~nAi~~aa~~i~~l~~~~---~-~~----------~~~~~~g~i~-~-g~~n~iP~~a~~~~diR~~~~~~~ 314 (434)
T 3ife_A 251 PGTAKNKMRNATKLAMEFNGHLPVEE---A-PE----------YTEGYEGFYH-L-LSLNGDVEQSKAYYIIRDFDRKNF 314 (434)
T ss_dssp GGGCTTTCBCHHHHHHHHHHTSCTTC---S-GG----------GCCTTCCEEE-E-EEEEECSSEEEEEEEEEESSHHHH
T ss_pred CCCCcccchhHHHHHHHHHHhccccc---C-CC----------cceeeeEEEE-e-eeEeEecCeEEEEEEEecCCHHHH
Confidence 87 79999999999999999887541 1 11 1233456665 3 457999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhc-----ceeee-ccCCCC----ccCCcc-----c---cccCCcccccCCCCCccccccccccc-
Q 024502 160 TDVMKRLQEYVDDINEN-----IEKLD-TRGPVS----KYVLPD-----E---NIRGRHVLSLHYLTLGRDDFRIFPLR- 220 (266)
Q Consensus 160 ~~v~~~i~~~i~~~~~~-----~~~~~-~~~~p~----~~~~~~-----~---~~~g~~~~~~~~~~~gg~D~~~~~~~- 220 (266)
+++.++|++.+++.+.. +++ + ...+++ ..+++. . +.+|.. ....++.||+|+++|.+.
T Consensus 315 ~~i~~~i~~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~~~~d~~l~~~~~~a~~~~G~~--~~~~~~~ggtD~~~~~~~G 391 (434)
T 3ife_A 315 EARKNTIENIVKQMQEKYGQDAVVL-EMNDQYYNMLEKIEPVREIVDIAYEAMKSLNIE--PNIHPIRGGTDGSQLSYMG 391 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGEEE-EEEEEECCTHHHHGGGTHHHHHHHHHHHHTTCC--CEECCBSSCCHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhcCCceEEE-EEeecccchhccccCCHHHHHHHHHHHHHhCCC--CEEeecccCchHHHHhhCC
Confidence 99999999999876532 332 2 222333 334433 1 124432 223567899999999876
Q ss_pred ccCceeccCcccceeecchhhhhhhhhHHHHHHHHHHHHHh
Q 024502 221 WQRHKIKFGRLKCIFYLSIYKFISNLFSVLNKSLAAVISRL 261 (266)
Q Consensus 221 ~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (266)
+| .+.|||.....|..-....-+-+..+...+++++.++
T Consensus 392 iP--~~~~g~g~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l 430 (434)
T 3ife_A 392 LP--TPNIFTGGENYHGKFEYVSVDVMEKAVQVIIEIARRF 430 (434)
T ss_dssp CC--CCEECCSEESTTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred Cc--EEEeCCCCCCCcCCceeecHHHHHHHHHHHHHHHHHH
Confidence 55 4678886644444433334445566777777777765
No 20
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=99.92 E-value=1.2e-24 Score=200.11 Aligned_cols=240 Identities=13% Similarity=0.036 Sum_probs=175.4
Q ss_pred hhhhcccCCCCceEEEEEEcCCCC-----CCCCCchHHHHHHc---------------------------ccc-------
Q 024502 2 RKLGETKLKLKSTVIAVFIASEEN-----SAITGVGVDALVKD---------------------------GLL------- 42 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~-----g~~~~~Ga~~~i~~---------------------------g~~------- 42 (266)
+.|++.+.+++++|+|+|++|||+ |+ .|++.|.+. |+.
T Consensus 137 ~~L~~~~~~~~~~v~lif~~dEE~~~~~~g~---~Gs~~l~~~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~~~~~ 213 (474)
T 2v8h_A 137 RTFKDNNYVPNYDVCVVVWFNAEGARFARSC---TGSSVWSHDLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPASY 213 (474)
T ss_dssp HHHHHHTCCCSSCEEEEECTTCSCSSSSCTT---HHHHHHTTSSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSBCSCT
T ss_pred HHHHHcCCCCCCCEEEEEECCccCCCCCCCc---ccHHHHHhccCHhhhhhhcccccccCccHHHHHHhcCCcccccccc
Confidence 567778888899999999999998 44 589988641 110
Q ss_pred CCCCCCcEEEEeCCCC----------CceEEeeeeEEEEEEEEecCCCcc-CCC-CCCCHHHHHHHHHHHHHHhhccCCC
Q 024502 43 NKLKGGPLYWIDTADK----------QPCIGTGGMIPWKLHVTGKLFHSG-LPH-KAINPLELAMEALKVIQTRFYKDFP 110 (266)
Q Consensus 43 ~~~~~d~~i~~e~~~~----------~i~~~~~g~~~~~i~v~G~~~Has-~P~-~g~nAi~~~a~~i~~l~~~~~~~~~ 110 (266)
..-++|+++..|..++ .+..+.+|..+++|+++|+++|++ .|+ .|.||+.++++++.+++.+..+.
T Consensus 214 ~~e~~~~~~~lHi~~g~~l~~~g~~~~i~~~~~G~~~~~i~v~G~~~Hsg~~P~~~g~nAi~~~a~~i~~l~~~~~~~-- 291 (474)
T 2v8h_A 214 KENEIDAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTVHGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQRH-- 291 (474)
T ss_dssp TTSCCSEEEEEEECCSSHHHHTTCSEEEEEEECEEEEEEEEEECCCEETTTCCGGGCCCHHHHHHHHHHHHHHHHHHT--
T ss_pred cccchhhheeeeeccCccccccCCcceeEEeecceEEEEEEEEeecCCCCCCCcccCCCHHHHHHHHHHHHHHHHhhc--
Confidence 0113467777775543 134567999999999999999999 597 89999999999999998764322
Q ss_pred CCCCCccCCcCCCceEeeEEEecCC-CccceeCCeEEEEEEEeCCCCCCHHHHHHHHHHHHHHHhhc-----cee-ee-c
Q 024502 111 PHPKEQVYGFETPSTMKPTQWSYPG-GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINEN-----IEK-LD-T 182 (266)
Q Consensus 111 ~~~~~~~~~~~~~~t~~~g~i~~gg-~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~i~~~~~~-----~~~-~~-~ 182 (266)
..++++|.|+ +| +..|+||++|++.+|+|+++.++.+++.++|++.+++.+.. +++ ++ .
T Consensus 292 ------------~~t~~vg~i~-gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~~~~g~~~~~~~~ 358 (474)
T 2v8h_A 292 ------------NGLFTCGIID-AKPYSVNIIPGEVSFTLDFRHPSDDVLATMLKEAAAEFDRLIKINDGGALSYESETL 358 (474)
T ss_dssp ------------TCEEECCCEE-EESCCTTEECSEEEEEEEEEESCHHHHHHHHHHHHHHHHHHTTCCTTCCCEEEEEEE
T ss_pred ------------CCEEEEEEEE-ecCCCCceeCCEEEEEEEecCCChHHHHHHHHHHHHHHHHHHhhcccCCcEEEEEEe
Confidence 2579999999 76 89999999999999999999999999999999999886532 222 22 3
Q ss_pred cCCCCccCCcc-----cc---ccC-CcccccCCCCCcccccccccccccCceeccCccc-ceeecchhhhhhhhhHHHHH
Q 024502 183 RGPVSKYVLPD-----EN---IRG-RHVLSLHYLTLGRDDFRIFPLRWQRHKIKFGRLK-CIFYLSIYKFISNLFSVLNK 252 (266)
Q Consensus 183 ~~~p~~~~~~~-----~~---~~g-~~~~~~~~~~~gg~D~~~~~~~~~~~~v~~G~~~-~~~~~~~~~~~~~~~~~~~~ 252 (266)
..+||+.+++. .+ .+| .... ...++.||+|+++|++.+| ..+.|||.. ...|..-....-.-+..+..
T Consensus 359 ~~~~~~~~d~~l~~~~~~a~~~~G~~~~~-~~~~~~ggtD~~~~~~~~P-~~~~fgp~~~~~~H~p~E~i~~~~l~~~~~ 436 (474)
T 2v8h_A 359 QVSPAVNFHEVCIECVSRSAFAQFKKDQV-RQIWSGAGHDSCQTAPHVP-TSMIFIPSKDGLSHNYYEYSSPEEIENGFK 436 (474)
T ss_dssp EEECCEECCHHHHHHHHHHHHHHSCGGGE-EEEEESSCCTHHHHTTTSC-EEEEEECCGGGCCSSTTCCCCHHHHHHHHH
T ss_pred cCCCCccCCHHHHHHHHHHHHHcCCCCcc-eecCCcCCccHHHHHhhCC-EEEEEeCCCCCCCCCccccCCHHHHHHHHH
Confidence 45677766654 11 125 3011 2246789999999998754 457888875 43445444444555666777
Q ss_pred HHHHHHHHh
Q 024502 253 SLAAVISRL 261 (266)
Q Consensus 253 ~~~~~~~~~ 261 (266)
-+++++.++
T Consensus 437 ~~~~~l~~l 445 (474)
T 2v8h_A 437 VLLQAIINY 445 (474)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777665
No 21
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=99.92 E-value=1.3e-24 Score=199.93 Aligned_cols=252 Identities=13% Similarity=0.108 Sum_probs=178.7
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCC-CCCcEEEEeCCC---C--CceEEeeeeEEEE--EE
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKL-KGGPLYWIDTAD---K--QPCIGTGGMIPWK--LH 73 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~-~~d~~i~~e~~~---~--~i~~~~~g~~~~~--i~ 73 (266)
+.|++.+..+. +|+|+|++|||+|+ .|++.|++++. +.+ ++|++++.|++. + .+.++.+|..+++ |+
T Consensus 143 ~~l~~~~~~~~-~v~~~~~~~EE~g~---~g~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~i~~g~~G~~~~~~~v~ 217 (472)
T 3pfe_A 143 RALEQQGLPYP-RCILIIEACEESGS---YDLPFYIELLK-ERIGKPSLVICLDSGAGNYEQLWMTTSLRGNLVGKLTVE 217 (472)
T ss_dssp HHHHHTTCCCE-EEEEEEESCGGGTS---TTHHHHHHHHH-HHHCCCSEEEEECCBCSCSSSCEEEEEECEEEEEEEEEE
T ss_pred HHHHHcCCCCC-cEEEEEEeCCCCCC---hhHHHHHHHhH-hhccCCCEEEEeCCCcCCCCCeeEEEeeeEEEEEEEEEE
Confidence 56777776666 99999999999987 79999998762 222 468999999643 1 3466889988877 55
Q ss_pred EEecCCCccCCCCC-CCHHHHHHHHHHHHHHhhc---------cCCCCC-----------------CC----CccCCcCC
Q 024502 74 VTGKLFHSGLPHKA-INPLELAMEALKVIQTRFY---------KDFPPH-----------------PK----EQVYGFET 122 (266)
Q Consensus 74 v~G~~~Has~P~~g-~nAi~~~a~~i~~l~~~~~---------~~~~~~-----------------~~----~~~~~~~~ 122 (266)
++|+++|++.|+.. .||+..+++++.+|++... +.+.+. .. .....+..
T Consensus 218 ~~G~~~H~~~~~~~~~nai~~~~~~i~~l~~~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (472)
T 3pfe_A 218 LINEGVHSGSASGIVADSFRVARQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQ 297 (472)
T ss_dssp SCSSCBCHHHHTTTSCCHHHHHHHHHHHHBCTTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTCCCSCS
T ss_pred eCCCCcccCCCCCCCCCHHHHHHHHHHHhhCcCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCcccccc
Confidence 58999999998754 5999999999999987521 111110 00 00000000
Q ss_pred -----------CceEeeEEEecCC----CccceeCCeEEEEEEEeCCCCCCHHHHHHHHHHHHHHHh-hccee-ee-cc-
Q 024502 123 -----------PSTMKPTQWSYPG----GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDIN-ENIEK-LD-TR- 183 (266)
Q Consensus 123 -----------~~t~~~g~i~~gg----~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~i~~~~-~~~~~-~~-~~- 183 (266)
..+++++.|+ +| +..|+||++|++.+|+|+.+.++.+++.++|++.++..+ .++++ ++ ..
T Consensus 298 ~~~~~~~~~~~~~tl~i~~i~-gG~~~g~a~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~g~~v~v~~~~~ 376 (472)
T 3pfe_A 298 DKQQLILNRTWRPALTVTGAD-GFPAIADAGNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNPPYNAKVDFKIQNG 376 (472)
T ss_dssp CHHHHHHHHHTSCEEEEEEEE-SCCCTTTCCSCBCSEEEEEEEEEECTTCCHHHHHHHHHHHHHSSCGGGCEEEEEECSC
T ss_pred chHHHHHHhhcCCcEEEeeee-cCcCCCCCCCEeCCccEEEEEeecCCCCCHHHHHHHHHHHHHhhCCCCeEEEEEecCC
Confidence 3589999999 76 789999999999999999999999999999999998753 22332 33 34
Q ss_pred CCCCccCCcc------------ccccCCcccccCCCCCcccc-c-ccccccccC-ceeccCcc--cceeecchhhhhhhh
Q 024502 184 GPVSKYVLPD------------ENIRGRHVLSLHYLTLGRDD-F-RIFPLRWQR-HKIKFGRL--KCIFYLSIYKFISNL 246 (266)
Q Consensus 184 ~~p~~~~~~~------------~~~~g~~~~~~~~~~~gg~D-~-~~~~~~~~~-~~v~~G~~--~~~~~~~~~~~~~~~ 246 (266)
.+||+.++++ ++++|...+ .+..||+| | ++|.+.+|. +.+.+|+. ....|..-+.+...-
T Consensus 377 ~~pp~~~~~n~~~l~~~~~~a~~~~~G~~~~---~~~~gg~d~f~~~~~~~~Pg~p~v~~G~g~~~~~~H~p~E~i~~~~ 453 (472)
T 3pfe_A 377 GSKGWNAPLLSDWLAKAASEASMTYYDKPAA---YMGEGGTIPFMSMLGEQFPKAQFMITGVLGPHSNAHGPNEFLHLDM 453 (472)
T ss_dssp CBCCEECCCCCHHHHHHHHHHHHHHHSSCCE---EEEESSCCHHHHHHHHHCTTCEEEEECCBCTTCCTTSTTCEEEHHH
T ss_pred CCCcccCCCCChHHHHHHHHHHHHHcCCCce---eccCCCchhhHHHHHHHcCCCCEEEecCCCCCCCCcCCCcceeHHH
Confidence 6777775433 123454322 23456777 5 668777764 47777864 356677777777888
Q ss_pred hHHHHHHHHHHHHHhh
Q 024502 247 FSVLNKSLAAVISRLQ 262 (266)
Q Consensus 247 ~~~~~~~~~~~~~~~~ 262 (266)
+..+...+++++.+|-
T Consensus 454 l~~g~~~l~~~l~~la 469 (472)
T 3pfe_A 454 VKKLTSCVSYVLYSFS 469 (472)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8889999999988763
No 22
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=99.91 E-value=5.4e-24 Score=195.92 Aligned_cols=253 Identities=14% Similarity=0.027 Sum_probs=177.0
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCC-CCCCcEEEEeCC-----CCCceEEeeeeEEEEEEEE
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNK-LKGGPLYWIDTA-----DKQPCIGTGGMIPWKLHVT 75 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~-~~~d~~i~~e~~-----~~~i~~~~~g~~~~~i~v~ 75 (266)
+.|++.+.+++++|+|+|++|||+|+ .|++.|++.+...- .++|++++.|+. .+.+.++++|..+++|+++
T Consensus 149 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~Ga~~~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~i~~~~~G~~~~~i~v~ 225 (479)
T 2zog_A 149 EAYQKTGQEIPVNLRFCLEGMEESGS---EGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVE 225 (479)
T ss_dssp HHHHHTTCCCSSEEEEEEESCGGGTC---TTHHHHHHHTTTTTTTTCCEEEECCCBCSSSSSCEEEEEECEEEEEEEEEE
T ss_pred HHHHHhCCCCCCcEEEEEecccccCC---ccHHHHHHhhhhhhcccCCEEEEeCCCcCCCCCeEEEEecceEEEEEEEEE
Confidence 56777777889999999999999987 79999998752100 146899998863 2346679999999999999
Q ss_pred ecC--CCccCCCCCCCHHHHHHHHHHHHHHhhccC-----------CCCCCC-----CccCCc-----------------
Q 024502 76 GKL--FHSGLPHKAINPLELAMEALKVIQTRFYKD-----------FPPHPK-----EQVYGF----------------- 120 (266)
Q Consensus 76 G~~--~Has~P~~g~nAi~~~a~~i~~l~~~~~~~-----------~~~~~~-----~~~~~~----------------- 120 (266)
|++ +|++.| |.||+..+++++..|+.+..+. +.+... .....+
T Consensus 226 G~~~~~Hs~~~--g~~ai~~~~~~i~~l~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 303 (479)
T 2zog_A 226 CSDKDLHSGVY--GGSVHEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHS 303 (479)
T ss_dssp CCSSCEEHHHH--TTTSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCS
T ss_pred eCCCCCccCCC--CCCccCHHHHHHHHHHhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCcccccc
Confidence 999 999985 7899999999999887653221 000000 000000
Q ss_pred ---------CCCceEeeEEEecCC----CccceeCCeEEEEEEEeCCCCCCHHHHHHHHHHHHHHHhhc----cee-ee-
Q 024502 121 ---------ETPSTMKPTQWSYPG----GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINEN----IEK-LD- 181 (266)
Q Consensus 121 ---------~~~~t~~~g~i~~gg----~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~i~~~~~~----~~~-~~- 181 (266)
+...+++++.|+ +| +..|+||++|++.+|+|+.+.++.+++.+++++.++..+.. ..+ ++
T Consensus 304 ~~~~~~~~~~~~~~~~v~~i~-gg~~g~~~~NvIP~~a~~~~~~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~ 382 (479)
T 2zog_A 304 CKKDILMHRWRYPSLSLHGIE-GAFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKFAELQSPNKFKVYM 382 (479)
T ss_dssp SHHHHHHHHHTSCEEEEEEEE-SSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCSEEEEEE
T ss_pred chHHHHHHhhcCCCeEEeeee-cCCcCCCCccccCCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhccCCCceEEEEe
Confidence 013579999998 77 89999999999999999999999999999999999886532 221 22
Q ss_pred ccCCCCccCCccc-----------cccCCcccccCCCCCccccc-cccccc--ccCceeccCcccceeecchhhhhhhhh
Q 024502 182 TRGPVSKYVLPDE-----------NIRGRHVLSLHYLTLGRDDF-RIFPLR--WQRHKIKFGRLKCIFYLSIYKFISNLF 247 (266)
Q Consensus 182 ~~~~p~~~~~~~~-----------~~~g~~~~~~~~~~~gg~D~-~~~~~~--~~~~~v~~G~~~~~~~~~~~~~~~~~~ 247 (266)
...+|++.++++. +.+|.... ..++.|++|+ ++|.+. +|...+.|||.....|..-..+.-.-+
T Consensus 383 ~~~~p~~~~~~d~~~~~~~~~a~~~~~g~~~~--~~~~~gs~d~~~~~~~~~~~p~~~~g~g~~~~~~H~~~E~i~~~~l 460 (479)
T 2zog_A 383 GHGGKPWVSDFNHPHYQAGRRALKTVFGVEPD--LTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRLNY 460 (479)
T ss_dssp EEEECCEECCTTSHHHHHHHHHHHHHHSSCCE--EEEESSCCTHHHHHHHHHCSEEEECCCBCTTCCTTSTTCEEEHHHH
T ss_pred cCCCCceecCCCCHHHHHHHHHHHHHhCCCce--ecCCCCccchHHHHHHHhCCCEEEecCCCCccCCCCCCCcEeHHHH
Confidence 2346776665551 23454321 1245788998 578764 443333467765455555555555567
Q ss_pred HHHHHHHHHHHHHhh
Q 024502 248 SVLNKSLAAVISRLQ 262 (266)
Q Consensus 248 ~~~~~~~~~~~~~~~ 262 (266)
..+...+++++.++.
T Consensus 461 ~~~~~~~~~~~~~~~ 475 (479)
T 2zog_A 461 IEGTKMLAAYLYEVS 475 (479)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 777888888877653
No 23
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=99.90 E-value=2.5e-23 Score=191.99 Aligned_cols=225 Identities=14% Similarity=0.107 Sum_probs=159.6
Q ss_pred CCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCCC-CCceEEeeee-----------------EEEE
Q 024502 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD-KQPCIGTGGM-----------------IPWK 71 (266)
Q Consensus 10 ~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~~-~~i~~~~~g~-----------------~~~~ 71 (266)
.++++|+|+|++|||+|+ .|++.|++++ +++|+++..++.+ +.+.++++|. .+++
T Consensus 133 ~~~~~v~~~~~~~EE~g~---~Ga~~~~~~~----~~~d~~~~~d~~~~~~i~~g~~g~~~~~~~~~~~~~~~~~g~~~~ 205 (487)
T 2qyv_A 133 IAHPELEVLLTMTEERGM---EGAIGLRPNW----LRSEILINTDTEENGEIYIGCAGGENADLELPIEYQVNNFEHCYQ 205 (487)
T ss_dssp SCCSSEEEEEESCTTTTC---HHHHTCCSSC----CCCSEEEECCCCCTTEEEEEECEEEEEEEEEECCEEECCCSEEEE
T ss_pred CCCCCEEEEEEeccccCC---HHHHHHHHhc----cCCCEEEEEccCCCCeEEEeccCCcceeeeccccccccCCCeEEE
Confidence 478999999999999987 7999988754 3468888888764 3454554444 7799
Q ss_pred EEEEe-cCCCccCC-CCC-CCHHHHHHHHHHHHHHhhccCCCCCCCCccCCcCCCceEeeEEEecCCCccceeCCeEEEE
Q 024502 72 LHVTG-KLFHSGLP-HKA-INPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVS 148 (266)
Q Consensus 72 i~v~G-~~~Has~P-~~g-~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~nviP~~a~~~ 148 (266)
|+++| +++|++.| +.+ .||+..+++++.+++... + ..+++++.|+ +|...|+||++|++.
T Consensus 206 i~v~G~~~~Hsg~~~~~g~~nAi~~~~~~i~~l~~~~-----~-----------~~~~~v~~i~-gG~~~NvIP~~a~~~ 268 (487)
T 2qyv_A 206 VVLKGLRGGHSGVDIHTGRANAIKVLLRFLAELQQNQ-----P-----------HFDFTLANIR-GGSIRNAIPRESVAT 268 (487)
T ss_dssp EEEECCCCCBTTTTTTSCCCCHHHHHHHHHHHHHHHC-----T-----------TCCEEEEEEE-EESCTTBCCCCEEEE
T ss_pred EEEEccCCccCCcccccCCCCHHHHHHHHHHHHhhcc-----C-----------CCcEEEEEEe-CCCcCcccCCceEEE
Confidence 99999 89999987 776 799999999999998751 1 3468999999 999999999999999
Q ss_pred EEE----------------------------------------eCCCCCCHHHHHHHHHHHH------------------
Q 024502 149 GDV----------------------------------------RLTPFYNVTDVMKRLQEYV------------------ 170 (266)
Q Consensus 149 ~di----------------------------------------R~~~~~~~~~v~~~i~~~i------------------ 170 (266)
+++ |..+.++.+.+.+.+++.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~i~~~i~~~~~gv~~~~~~~~~~~~~s~ 348 (487)
T 2qyv_A 269 LVFNGDITVLQSAVQKFADVIKAELALTEPNLIFTLEKVEKPQQVFSSQCTKNIIHCLNVLPNGVVRNSDVIENVVETSL 348 (487)
T ss_dssp EEECSCHHHHHHHHHHHHHHHHHHTTTTCTTCEEEEEECCCCSEEECHHHHHHHHHHHHHSCCEEEEECSSSTTCEEEEE
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeccccccccCHHHHHHHHHHHHhCCCcceeeccccCCceEecc
Confidence 999 6666555555555554432
Q ss_pred ---------------------------------HHHhh--cceeee-ccCCCCccCCccc-----------cccCCcccc
Q 024502 171 ---------------------------------DDINE--NIEKLD-TRGPVSKYVLPDE-----------NIRGRHVLS 203 (266)
Q Consensus 171 ---------------------------------~~~~~--~~~~~~-~~~~p~~~~~~~~-----------~~~g~~~~~ 203 (266)
+..+. ++++ + ...+||+.++++. +.+|...
T Consensus 349 nl~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~p~~~~~~d~~l~~~~~~~~~~~~G~~~-- 425 (487)
T 2qyv_A 349 SIGVLKTEDNFVRSTMLVRSLIESGKSYVASLLKSLASLAQGNI-NLSGDYPGWEPQSHSDILDLTKTIYAQVLGTDP-- 425 (487)
T ss_dssp EEEEEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHTCEE-EEEEEECCBCCCSCCHHHHHHHHHHHHHHSSCC--
T ss_pred ceEEEEEcCCeEEEEEEccCCCHHHHHHHHHHHHHHHHHcCceE-EECCCCCCCCCCCCCHHHHHHHHHHHHHhCCCC--
Confidence 11221 1222 2 2356778776551 2355432
Q ss_pred cCCCCCccccccccccccc-CceeccCcccceeecchhhhhhhhhHHHHHHHHHHHHHh
Q 024502 204 LHYLTLGRDDFRIFPLRWQ-RHKIKFGRLKCIFYLSIYKFISNLFSVLNKSLAAVISRL 261 (266)
Q Consensus 204 ~~~~~~gg~D~~~~~~~~~-~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (266)
...++.||+|+++|.+++| .+.+.|||.....|..-....-+-+..+...+++++.+|
T Consensus 426 ~~~~~~gg~D~~~~~~~~pg~~~v~~Gp~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l 484 (487)
T 2qyv_A 426 EIKVIHAGLECGLLKKIYPTIDMVSIGPTIRNAHSPDEKVHIPAVETYWKVLTGILAHI 484 (487)
T ss_dssp EEEEESSCCTHHHHHHHCTTSEEEECCCCEESTTSTTCEEEHHHHHHHHHHHHHHHHHC
T ss_pred eEEEEeccccHHHHHhhCCCCCEEEECCCCCCCCCCCceeEHHHHHHHHHHHHHHHHHH
Confidence 2245789999999998765 447899996543444434444445666777777777665
No 24
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.89 E-value=5.9e-23 Score=185.91 Aligned_cols=232 Identities=9% Similarity=-0.034 Sum_probs=165.2
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCC-CCCceEEeeeeEEEEEEEEecCCC
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA-DKQPCIGTGGMIPWKLHVTGKLFH 80 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~-~~~i~~~~~g~~~~~i~v~G~~~H 80 (266)
+.|++.+ .++++|+|+|++|||+| .|++.+++++ +++|+++..++. .+.+.++.+|..+++|+++|+++|
T Consensus 153 ~~l~~~~-~~~~~v~~~~~~~EE~g----~Ga~~~~~~~----~~~d~~i~~d~~~~g~i~~~~~g~~~~~i~~~G~~~H 223 (417)
T 1fno_A 153 AVLKGNP-IPHGDIKVAFTPDEEVG----KGAKHFDVEA----FGAQWAYTVDGGGVGELEFENFNAASVNIKIVGNNVH 223 (417)
T ss_dssp HHHHSSS-CCCCCEEEEEESCGGGT----CTTTTCCHHH----HCCSEEEECCCCSTTBEECCBCEEEEEEEEEECBCCC
T ss_pred HHHHhCC-CCCCcEEEEEEeccccC----CChhhhchhh----cCCCEEEEeCCCCcCeeEEecCCceeEEEEEEeeccC
Confidence 5667777 78899999999999987 4888776543 356888887754 355677899999999999999999
Q ss_pred cc-CCCCCCCHHHHHHHHHHHHHHhhccCCCCCCCCccCCcCCCceEeeEEEecCCCccceeCCeEEEEEEEeCCCCCCH
Q 024502 81 SG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNV 159 (266)
Q Consensus 81 as-~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~nviP~~a~~~~diR~~~~~~~ 159 (266)
++ .|+.|.||+..+++++.+|+....+.... ....+++++.|+ +| |++|++.+|+|+.+.++.
T Consensus 224 s~~~p~~g~nAi~~~a~~i~~l~~~~~~~~~~---------~~~~~~~v~~i~-gG------p~~a~~~~d~R~~~~~~~ 287 (417)
T 1fno_A 224 PGTAKGVMVNALSLAARIHAEVPADEAPETTE---------GYEGFYHLASMK-GT------VDRAEMHYIIRDFDRKQF 287 (417)
T ss_dssp GGGCTTTCBCHHHHHHHHHHTSCTTSSGGGCC---------TTCCEEEEEEEE-EC------SSEEEEEEEEEESSHHHH
T ss_pred CCCCccccCCHHHHHHHHHHhhhccCCccccc---------ccccEEEEEEEe-ec------cCeEEEEEEEeCCCHHHH
Confidence 99 79999999999999999887642211111 113578999998 65 999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhc------ceeee-ccCCCC----ccCCcc-----c---cccCCcccccCCCCCccccccccccc
Q 024502 160 TDVMKRLQEYVDDINEN------IEKLD-TRGPVS----KYVLPD-----E---NIRGRHVLSLHYLTLGRDDFRIFPLR 220 (266)
Q Consensus 160 ~~v~~~i~~~i~~~~~~------~~~~~-~~~~p~----~~~~~~-----~---~~~g~~~~~~~~~~~gg~D~~~~~~~ 220 (266)
+++.++|++.+++.+.. +++ + ...+++ ..+++. . +.+|.. ....++.||+|+++|...
T Consensus 288 ~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~--~~~~~~~ggtD~~~~~~~ 364 (417)
T 1fno_A 288 EARKRKMMEIAKKVGKGLHPDCYIEL-VIEDSYYNMREKVVEHPHILDIAQQAMRDCHIT--PEMKPIRGGTDGAQLSFM 364 (417)
T ss_dssp HHHHHHHHHHHHHHTTTCCTTCCEEE-EEEEEECCCHHHHHTSTHHHHHHHHHHHHTTCC--CBCCCBSSCCHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHcCCCceEEE-EEeccccchhccccCCCHHHHHHHHHHHHcCCC--ceeccceeccchHhHHhc
Confidence 99999999999887533 222 2 122332 233333 1 113432 123567899999999874
Q ss_pred ccCceeccCcccceeecchhhhhhhhhHHHHHHHHHHHHHhh
Q 024502 221 WQRHKIKFGRLKCIFYLSIYKFISNLFSVLNKSLAAVISRLQ 262 (266)
Q Consensus 221 ~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (266)
..+.+.|||.....|..-....-+-+..+..-+++++.++.
T Consensus 365 -gip~v~~G~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 405 (417)
T 1fno_A 365 -GLPCPNLFTGGYNYHGKHEFVTLEGMEKAVQVIVRIAELTA 405 (417)
T ss_dssp -TCCCCEECCSEESTTSTTCEEEHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCEEEEcCCCCCCCCcccccCHHHHHHHHHHHHHHHHHHH
Confidence 23456799876444454444444556666777777776653
No 25
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=99.89 E-value=4.9e-23 Score=190.21 Aligned_cols=242 Identities=13% Similarity=0.079 Sum_probs=133.0
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHcccc---------------------------------------
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLL--------------------------------------- 42 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~--------------------------------------- 42 (266)
+.|++.+..++++|+|+|++|||+|+ .|++.+++....
T Consensus 151 ~~l~~~~~~~~~~i~~~~~~~EE~g~---~g~~~~~~~~~~~~~~~~~d~~~p~~~g~~G~~~~~l~~~~~~~~~~~~~~ 227 (492)
T 3khx_A 151 KILEDMNVDWKKRIHMIIGTDEESDW---KCTDRYFKTEEMPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDY 227 (492)
T ss_dssp HHHHHTTCCCSSEEEEEEECCTTCCC---CTTSHHHHHSCCCSEEECSSCSSCSCCCBCEEEEEEEEECCCCCCCCCCSE
T ss_pred HHHHHcCCCCCCCEEEEEECCccCCC---cCHHHHHHhCcCCCEEEecCCCccEEEecCcEEEEEEEEeccccccccccc
Confidence 56777887889999999999999998 799999986421
Q ss_pred ----------CCCCCCcE--EEEeCCCC-Cc---------eEEeeeeE-----EEEEEEEecCCCccCCCCCCCHHHHHH
Q 024502 43 ----------NKLKGGPL--YWIDTADK-QP---------CIGTGGMI-----PWKLHVTGKLFHSGLPHKAINPLELAM 95 (266)
Q Consensus 43 ----------~~~~~d~~--i~~e~~~~-~i---------~~~~~g~~-----~~~i~v~G~~~Has~P~~g~nAi~~~a 95 (266)
.+..||.+ ++.+|+.. .+ ..+.+|.. +++|+++|+++|++.|+.|+|||..++
T Consensus 228 ~~~~~~~g~~~n~vpd~~~aiv~ept~~~~~~~~~~~~~~~~g~kG~~~~~~~~~~i~v~GkaaHas~P~~G~NAi~~~a 307 (492)
T 3khx_A 228 ELITFKSGERYNMVPDHAEARVLVKENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLL 307 (492)
T ss_dssp EEEEEEECSCTTSCCCEEEEEEEECSCHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEECBCCCC------BCHHHHHH
T ss_pred eeEEecccccCCcCCchHheEeecccchHHHHHHHHHHHhhcCceeEEEecCCeEEEEEEeEEcccCCCccCccHHHHHH
Confidence 00112333 44444321 11 12347777 999999999999999999999999999
Q ss_pred HHHHHHH------Hhh---ccCCC--CCCCC----ccCCcCCCceEeeEEEecCCCccceeCCeEEEEEEEeCCCCCCHH
Q 024502 96 EALKVIQ------TRF---YKDFP--PHPKE----QVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVT 160 (266)
Q Consensus 96 ~~i~~l~------~~~---~~~~~--~~~~~----~~~~~~~~~t~~~g~i~~gg~~~nviP~~a~~~~diR~~~~~~~~ 160 (266)
+++.+++ .+. .+.+. ..... ......+.+++|+|.|+ +|. |++|++++|+|+++.++.+
T Consensus 308 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~d~~~G~~t~n~g~i~-~g~-----P~~a~~~idiR~~~~~~~~ 381 (492)
T 3khx_A 308 KFLASLNLDNNAQAFVAFSNRYLFNSDFGEKMGMKFHTDVMGDVTTNIGVIT-YDN-----ENAGLFGINLRYPEGFEFE 381 (492)
T ss_dssp HHHTTSCBCHHHHHHHHHHHHHTTTCTTSGGGTCC-------CCEEEEEEEE-EET-----TTCCEEEEEEEECTTCCHH
T ss_pred HHHHhcCCCchHHHHHHHHHHhhCCCCCccccCCccccCCcCccEEeeeEEE-Eec-----CCEEEEEEEeeCCCCCCHH
Confidence 9998875 111 00000 00000 00112346788999988 553 9999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcceeeeccCCCCccCCccc-----------cccCCcccccCCCCCcccccccccccccCceeccC
Q 024502 161 DVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDE-----------NIRGRHVLSLHYLTLGRDDFRIFPLRWQRHKIKFG 229 (266)
Q Consensus 161 ~v~~~i~~~i~~~~~~~~~~~~~~~p~~~~~~~~-----------~~~g~~~~~~~~~~~gg~D~~~~~~~~~~~~v~~G 229 (266)
++.++++++++....++++ ...+||...+++. +..|.. .....+.||+|+++|.. .+.||
T Consensus 382 ~v~~~i~~~~~~~g~~~~i--~~~~~p~~~~~d~~lv~~l~~a~~~~~G~~--~~~~~~gggtDa~~~~~-----~v~~G 452 (492)
T 3khx_A 382 KAMDRFANEIQQYGFEVKL--GKVQPPHYVDKNDPFVQKLVTAYRNQTNDM--TEPYTIGGGTYARNLDK-----GVAFG 452 (492)
T ss_dssp HHHHHHHHHHGGGTEEEEE--EEEECCBCCGGGCHHHHHHHHHHHTTCC-------------------------------
T ss_pred HHHHHHHHHHHHcCCEEEE--eccCCceecCCCcHHHHHHHHHHHHHhCCC--CeEEeeehhHHHHHhhC-----ceEEC
Confidence 9999999988754333332 2234555555441 223432 23356789999998863 68888
Q ss_pred cc----c-ceeecchhhhhhhhhHHHHHHHHHHHHHhh
Q 024502 230 RL----K-CIFYLSIYKFISNLFSVLNKSLAAVISRLQ 262 (266)
Q Consensus 230 ~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (266)
|. . ..+.-..|+..+++. .+..-++++|.+|.
T Consensus 453 ~~fPg~~~~~H~~dE~v~i~~l~-~~~~i~~~~l~~l~ 489 (492)
T 3khx_A 453 AMFSDSEDLMHQKNEYITKKQLF-NATSIYLEAIYSLC 489 (492)
T ss_dssp -----------CCSCEEEHHHHH-HHHHHHHHHHHHHH
T ss_pred CcCCCCCCCCCCCccCcCHHHHH-HHHHHHHHHHHHHh
Confidence 65 1 234455666665554 45555666666653
No 26
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=99.86 E-value=7.8e-22 Score=182.07 Aligned_cols=223 Identities=16% Similarity=0.135 Sum_probs=154.7
Q ss_pred CCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCCC-CCce------------------EEeeeeEE
Q 024502 9 LKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD-KQPC------------------IGTGGMIP 69 (266)
Q Consensus 9 ~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~~-~~i~------------------~~~~g~~~ 69 (266)
..++++|.|+|++|||+|+ .|++.|++.. +++|+++..++.. +.+. .+++|..+
T Consensus 135 ~~~~~~v~~~~~~~EE~g~---~Ga~~~~~~~----~~~~~~~~~d~~~~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~ 207 (490)
T 3mru_A 135 EIKHGPIEVLLTIDEEAGM---TGAFGLEAGW----LKGDILLNTDSEQEGEVYMGCAGGIDGAMTFDITRDAIPAGFIT 207 (490)
T ss_dssp SCCCCSEEEEEESCSSSTT---GGGGTCCSSS----CCSSEEEECCCCCTTCCEEEECEEEEEEEEEECCEECCCTTEEE
T ss_pred CCCCCCEEEEEEccccccc---HhHHHhhhcc----cCCCEEEEcCCCCCCeEEEecCCccceEEEeeeeeeccCCCceE
Confidence 3568999999999999987 7999988643 3557788777542 2221 13568899
Q ss_pred EEEEEEe-cCCCcc-CCCCCC-CHHHHHHHHHHHHHHhhccCCCCCCCCccCCcCCCceEeeEEEecCCCccceeCCeEE
Q 024502 70 WKLHVTG-KLFHSG-LPHKAI-NPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECT 146 (266)
Q Consensus 70 ~~i~v~G-~~~Has-~P~~g~-nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~nviP~~a~ 146 (266)
++|+++| +++|++ .|+.|+ ||+..+++++..|++. .+++++.|+ ||...|+||++|+
T Consensus 208 ~~i~v~G~~~gHs~~~p~~g~~nai~~~~~~l~~l~~~-------------------~~~~v~~i~-gG~~~NvIP~~a~ 267 (490)
T 3mru_A 208 RQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGHAQE-------------------LDLRLVEFR-GGSLRNAIPREAF 267 (490)
T ss_dssp EEEEEECCCCEETTTSSSSCCCCHHHHHHHHHHHHTTT-------------------TTCEEEEEE-ECSCTTEECCCEE
T ss_pred EEEEEECCCCcccccccccCCcCHHHHHHHHHHHHHhc-------------------CcEEEEEEE-CCCCCcccCCccE
Confidence 9999999 999999 599999 9999999999987641 246899999 9999999999999
Q ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHh----------------------------------------------------
Q 024502 147 VSGDVRLTPFYNVTDVMKRLQEYVDDIN---------------------------------------------------- 174 (266)
Q Consensus 147 ~~~diR~~~~~~~~~v~~~i~~~i~~~~---------------------------------------------------- 174 (266)
+.+++|..+.+..+++.+++.+.++...
T Consensus 268 ~~~~iR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~l~~~~~G~~~~~~~~~g~v~ 347 (490)
T 3mru_A 268 VTVALPAENQDKLAELFNYYTELLKTELGKIETDIVTFNEEVATDAQVFAIADQQRFIAALNACPNGVMRMSDEVEGVVE 347 (490)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEEECCCCCCEECHHHHHHHHHHHHHSCCEEEEECTTTTSCEE
T ss_pred EEEEECcccHHHHHHHHHHHHHHHHHHhhccCCCeEEEEEecCCccccCCHHHHHHHHHHHHHCCCccceeccccCCCee
Confidence 9999997654444444444444332210
Q ss_pred ------------------------------------------hcceeee-ccCCCCccCCccc-----------cccCCc
Q 024502 175 ------------------------------------------ENIEKLD-TRGPVSKYVLPDE-----------NIRGRH 200 (266)
Q Consensus 175 ------------------------------------------~~~~~~~-~~~~p~~~~~~~~-----------~~~g~~ 200 (266)
.+++ ++ ...+||+..+++. +.+|..
T Consensus 348 ~S~n~gv~~~~~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~~~g~~-~~~~~~~p~~~~~~d~~lv~~l~~a~~~~~G~~ 426 (490)
T 3mru_A 348 TSLNVGVITTEENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAGAQ-IEFSGAYPGWKPDADSEIMAIFRDMYEGIYGHK 426 (490)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEESSHHHHHHHHHHHHHHHHHTTCE-EEEEEEECCBCCCTTCHHHHHHHHHHHTTSSSC
T ss_pred EEEEEEEEEEeCCEEEEEEEcCCCCchHHHHHHHHHHHHHHHcCCe-EEecCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Confidence 0011 11 2356778777661 334543
Q ss_pred ccccCCCCCcccccccccccccC-ceeccCccc-ceeecchhhhhhhhhHHHHHHHHHHHHHhh
Q 024502 201 VLSLHYLTLGRDDFRIFPLRWQR-HKIKFGRLK-CIFYLSIYKFISNLFSVLNKSLAAVISRLQ 262 (266)
Q Consensus 201 ~~~~~~~~~gg~D~~~~~~~~~~-~~v~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (266)
....++.||+|+++|++.+|. +.+.|||.. ..+.-..|+..+++- .+...+.+++.+|.
T Consensus 427 --~~~~~~ggg~d~~~~~~~~p~~~~v~fGp~~~~~H~p~E~v~i~~l~-~~~~~l~~~l~~l~ 487 (490)
T 3mru_A 427 --PNIMVIHAGLECGLFKEPYPNMDMVSFGPTIKFPHSPDEKVKIDTVQ-LFWDQMVALLEAIP 487 (490)
T ss_dssp --CCCEEESSCCHHHHTTSSCTTCEEEECCCCEESTTSTTCEEEHHHHH-HHHHHHHHHHHHCC
T ss_pred --CeEEEEEecHHHHHHHHhCCCCCEEEECCCCCCCCCCCccccHHHHH-HHHHHHHHHHHHhh
Confidence 233567899999999988864 699999976 333345555555443 34455666666653
No 27
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.84 E-value=1.5e-20 Score=172.46 Aligned_cols=240 Identities=14% Similarity=0.101 Sum_probs=155.4
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCC--CCCCc---EEEEe-----------CCC--CC----
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNK--LKGGP---LYWID-----------TAD--KQ---- 59 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~--~~~d~---~i~~e-----------~~~--~~---- 59 (266)
+.|++.+.+++++|+|+|++|||+|+ .|++.|++.+...+ +.+|. ++..+ ... +.
T Consensus 132 ~~l~~~~~~~~~~i~~i~~~~EE~g~---~G~~~~~~~~~~~~~~~~~D~~~~~~~ge~g~~~~~l~~~~~~~~g~~~~~ 208 (470)
T 1lfw_A 132 LLLKEAGFKPKKKIDFVLGTNEETNW---VGIDYYLKHEPTPDIVFSPDAEYPIINGEQGIFTLEFSFKNDDTKGDYVLD 208 (470)
T ss_dssp HHHHHHTCCCSSEEEEEEESCTTTTC---HHHHHHHHHSCCCSEEEESSEESSEEEEECEEEEEEEEECCCCCCCSBEEE
T ss_pred HHHHHcCCCCCCCEEEEEecCcccCC---ccHHHHHHhCcCCcEEEEeCCCceEEEeccceEEEEEEEccCCcCCCccee
Confidence 56777777899999999999999987 79999998754321 22343 22221 110 11
Q ss_pred ---------ce-------E-------------------EeeeeE-----EEEEEEEecCCCccCCCCCCCHHHHHHHHHH
Q 024502 60 ---------PC-------I-------------------GTGGMI-----PWKLHVTGKLFHSGLPHKAINPLELAMEALK 99 (266)
Q Consensus 60 ---------i~-------~-------------------~~~g~~-----~~~i~v~G~~~Has~P~~g~nAi~~~a~~i~ 99 (266)
+. + +.+|.. +++|+++|+++|++.|+.|+||+.++++++.
T Consensus 209 ~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~ 288 (470)
T 1lfw_A 209 KFKAGIATNVTPQVTRATISGPDLEAVKLAYESFLADKELDGSFEINDESADIVLIGQGAHASAPQVGKNSATFLALFLD 288 (470)
T ss_dssp EEEECSBTTBCCSEEEEEEECSCHHHHHHHHHHHHHHHTCEEEEEEETTEEEEEEECBCCBTTCGGGSBCHHHHHHHHHT
T ss_pred eeecCCcCCcccccceEEecccchHHHHHHHHHHhhhhccccceeecCCcEEEEEeecccCCCCCccCccHHHHHHHHHH
Confidence 10 0 124443 8999999999999999999999999999998
Q ss_pred HHH------Hhh---ccCCCCCCCCc------cCCcCCCceEeeEEEecCCCccceeCCe-EEEEEEEeCCCCCCHHHHH
Q 024502 100 VIQ------TRF---YKDFPPHPKEQ------VYGFETPSTMKPTQWSYPGGGINQIPGE-CTVSGDVRLTPFYNVTDVM 163 (266)
Q Consensus 100 ~l~------~~~---~~~~~~~~~~~------~~~~~~~~t~~~g~i~~gg~~~nviP~~-a~~~~diR~~~~~~~~~v~ 163 (266)
+++ .+. .+.+.+...+. .....+..++++|.|+ .+|++ |++.+|+|+++.++.+++.
T Consensus 289 ~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t~~~g~i~-------~~p~~~a~~~~diR~~~~~~~~~i~ 361 (470)
T 1lfw_A 289 QYAFAGRDKNFLHFLAEVEHEDFYGKKLGIFHHDDLMGDLASSPSMFD-------YEHAGKASLLNNVRYPQGTDPDTMI 361 (470)
T ss_dssp TSCBCHHHHHHHHHHHHTTTTCTTSTTTTCCCEETTTEECEEEEEEEE-------EETTSCEEEEEEEEECTTCCHHHHH
T ss_pred hCCCcchhHHHHHHHHHhcCCCCcccccCCcccccccccceEEEEEEE-------EcCCceEEEEEEEecCCCCCHHHHH
Confidence 775 211 11111000000 0011123567777765 57999 9999999999999999999
Q ss_pred HHHHHHHHHHhhcceeee-ccCCCCccCCccc-----------cccCCcccccCCCCCcccccccccccccCceeccCcc
Q 024502 164 KRLQEYVDDINENIEKLD-TRGPVSKYVLPDE-----------NIRGRHVLSLHYLTLGRDDFRIFPLRWQRHKIKFGRL 231 (266)
Q Consensus 164 ~~i~~~i~~~~~~~~~~~-~~~~p~~~~~~~~-----------~~~g~~~~~~~~~~~gg~D~~~~~~~~~~~~v~~G~~ 231 (266)
++|++.++. ++++ + ...+|++.++++. +.+|... ....+.|++|+++|. +.+.|||.
T Consensus 362 ~~i~~~~~~---g~~v-~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~--~~~~~~g~~d~~~~~-----~~v~~G~~ 430 (470)
T 1lfw_A 362 KQVLDKFSG---ILDV-TYNGFEEPHYVPGSDPMVQTLLKVYEKQTGKPG--HEVVIGGGTYGRLFE-----RGVAFGAQ 430 (470)
T ss_dssp HHHHHHHTT---TEEE-ECSCCBCCEECCTTCHHHHHHHHHHHHHHCCCC--CEEEESSCCGGGGST-----TCEECCEE
T ss_pred HHHHHHhcC---CeEE-EEEeCCCceeeCCCCHHHHHHHHHHHHHcCCCC--ceeeecCHhHHHhCC-----CeEEECCC
Confidence 999998875 3332 2 3456777765551 2345431 123466889999874 46899985
Q ss_pred c----ceeecchhhhhhhhhHHHHHHHHHHHHHhh
Q 024502 232 K----CIFYLSIYKFISNLFSVLNKSLAAVISRLQ 262 (266)
Q Consensus 232 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (266)
. ...|..-....-.-+..+...+++++.++.
T Consensus 431 ~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~ 465 (470)
T 1lfw_A 431 PENGPMVMHAANEFMMLDDLILSIAIYAEAIYELT 465 (470)
T ss_dssp CTTCCCCTTSTTCEEEHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCcceEHHHHHHHHHHHHHHHHHHh
Confidence 2 233444344444456667777777776653
No 28
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=98.15 E-value=2e-07 Score=75.33 Aligned_cols=69 Identities=16% Similarity=0.206 Sum_probs=52.7
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEE---EEeCCCC-CceEEeeeeEEEEE
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLY---WIDTADK-QPCIGTGGMIPWKL 72 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i---~~e~~~~-~i~~~~~g~~~~~i 72 (266)
+.|++.+.+++++|+|+|++|||.|+. .|++.+++.+.++..++|+++ ..||+.. .+.++++|..+++|
T Consensus 126 ~~l~~~~~~~~~~v~~~~~~~EE~g~~--~Ga~~~~~~~~~~~~~~~~~id~g~~ept~~~~v~~~~kG~~~~~v 198 (198)
T 1q7l_A 126 RRLKVEGHRFPRTIHMTFVPDEEVGGH--QGMELFVQRPEFHALRAGFALDEGIANPTDAFTVFYSERSPWWVRV 198 (198)
T ss_dssp HHHHHTTCCCSSCEEEEEESCGGGTST--TTHHHHTTSHHHHTTCEEEEEECCCCCSSSSEEEEECCSSCGGGCC
T ss_pred HHHHHcCCCCCCCEEEEEEcccccCcc--ccHHHHHHhHHhccCCcCEEEecCccCCCCCceEEEEccEEEEEEC
Confidence 567777777899999999999999732 699999987554455667888 6677764 56778999877653
No 29
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=97.87 E-value=5.1e-06 Score=70.23 Aligned_cols=55 Identities=15% Similarity=0.048 Sum_probs=43.3
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCCCC
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK 58 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~~~ 58 (266)
+.|++.+.+++++|+|+|++|||.|+. .|++.+++.....+.++|+++..||+..
T Consensus 116 ~~l~~~~~~~~~~i~~~~~~~EE~g~~--~Ga~~~~~~~~~~~~~~d~~i~~Ept~~ 170 (269)
T 4h2k_A 116 EEYVKANPNHKGTIALLITSDEEATAK--DGTIHVVETLMARDEKITYCMVGEPSSA 170 (269)
T ss_dssp HHHHHHCTTCSSEEEEEEESCSSSCCT--TSHHHHHHHHHHTTCCCCEEEECCCCBS
T ss_pred HHHHHhCCCCCccEEEEEEeccccCcc--cCHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 456666667889999999999999862 2999999864434567899999999854
No 30
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=97.70 E-value=2.4e-05 Score=66.01 Aligned_cols=55 Identities=9% Similarity=0.001 Sum_probs=43.3
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCCCC
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK 58 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~~~ 58 (266)
+.|++.+..++++|+|+|++|||.|+. .|++.+++.......++|++++.||+..
T Consensus 116 ~~l~~~~~~~~~~v~~~~~~~EE~g~~--~Ga~~~~~~~~~~~~~~d~~i~~ept~~ 170 (268)
T 3t68_A 116 ERFIAEHPDHQGSIGFLITSDEEGPFI--NGTVRVVETLMARNELIDMCIVGEPSST 170 (268)
T ss_dssp HHHHHHCTTCSSEEEEEEESCTTSSSC--CHHHHHHHHHHHTTCCCCEEEECSCCBS
T ss_pred HHHHHhCCCCCCcEEEEEEeCCccCcc--cCHHHHHHHHHhcCCCCCEEEEeCCCCC
Confidence 456666667889999999999999862 3999999864434567899999999854
No 31
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=97.35 E-value=2.9e-05 Score=67.79 Aligned_cols=61 Identities=18% Similarity=0.091 Sum_probs=44.4
Q ss_pred CCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCCCCCceEEeeeeEEEEEEEEecCCCccCCCCCCC
Q 024502 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHSGLPHKAIN 89 (266)
Q Consensus 10 ~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~~~~i~~~~~g~~~~~i~v~G~~~Has~P~~g~n 89 (266)
+++++|+|+|+.+||.|+ .|++.+++. +.+|.+++.|++... ++.|+++|++.|+.|.|
T Consensus 184 ~~~~~i~~~~~~~EE~G~---~G~~~~~~~-----~~~~~~i~~d~~~~~-------------~~~G~~~h~~~~~~G~g 242 (340)
T 2fvg_A 184 SPAYDTYFVFTVQEETGL---RGSAVVVEQ-----LKPTCAIVVETTTAG-------------DNPELEERKWATHLGDG 242 (340)
T ss_dssp CCSEEEEEEEECCCC--------CHHHHHH-----HCCSEEEEEEEEEEC-------------SCSTTCCSSSSCCTTSC
T ss_pred ccCCcEEEEEEcccccch---hhhHHHhhc-----cCCCEEEEEecccCC-------------CCCCCccccCCcccCCC
Confidence 578999999999999998 799988763 356888888865421 45788899999999988
Q ss_pred HH
Q 024502 90 PL 91 (266)
Q Consensus 90 Ai 91 (266)
++
T Consensus 243 ~~ 244 (340)
T 2fvg_A 243 PA 244 (340)
T ss_dssp CE
T ss_pred cE
Confidence 64
No 32
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=95.09 E-value=0.0077 Score=51.32 Aligned_cols=52 Identities=19% Similarity=0.143 Sum_probs=37.6
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCC
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA 56 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~ 56 (266)
+.|++.+..++++|+|+|..+||.|. .|++.+++....+..+.++++..+..
T Consensus 130 ~~l~~~~~~~~~~i~~~~~~~EE~g~---~Gs~~~~~~~~~~~~~~~~~i~~D~~ 181 (299)
T 1rtq_A 130 RVLSENNFQPKRSIAFMAYAAEEVGL---RGSQDLANQYKSEGKNVVSALQLDMT 181 (299)
T ss_dssp HHHHHTTCCCSEEEEEEEESCGGGTS---HHHHHHHHHHHHTTCEEEEEEECSCC
T ss_pred HHHHHcCCCCCceEEEEEECCccCCc---hhHHHHHHhhhhccccEEEEEEecCC
Confidence 56677777889999999999999998 89999987643222223455666643
No 33
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=94.81 E-value=0.012 Score=49.63 Aligned_cols=52 Identities=12% Similarity=0.042 Sum_probs=38.2
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccC-CCCCCcEEEEeCC
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLN-KLKGGPLYWIDTA 56 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~-~~~~d~~i~~e~~ 56 (266)
+.|++.+.+++++|+|+|+++||.|. .|++.+++....+ .-++++++..+..
T Consensus 110 ~~l~~~~~~~~~~i~~~~~~~EE~g~---~Gs~~~~~~~~~~~~~~~~~~i~~D~~ 162 (284)
T 1tkj_A 110 LAVSRAGYQPDKHLRFAWWGAEELGL---IGSKFYVNNLPSADRSKLAGYLNFDMI 162 (284)
T ss_dssp HHHHHTTCCCSEEEEEEEESCGGGTS---HHHHHHHHHSCHHHHTTEEEEEEECCC
T ss_pred HHHHhcCCCCCceEEEEEECCcccCC---cCHHHHHhhCccchhhcEEEEEEecCC
Confidence 56777777889999999999999987 8999998763211 1123466777654
No 34
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=94.75 E-value=0.017 Score=49.80 Aligned_cols=45 Identities=24% Similarity=0.264 Sum_probs=34.6
Q ss_pred hhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCCC
Q 024502 3 KLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (266)
Q Consensus 3 ~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~~ 57 (266)
.|++.+ ++++|+|+|+++||.|+ .|++.+++ .+++|.+++.+++.
T Consensus 187 ~l~~~~--~~~~i~~~~~~~EE~G~---~G~~~~~~-----~~~~~~~i~~d~~~ 231 (332)
T 2wyr_A 187 DLVDHE--LEGKVIFAFTVQEEVGL---KGAKFLAN-----HYYPQYAFAIDSFA 231 (332)
T ss_dssp TTTTSC--CSSEEEEEEESCGGGTS---HHHHHHTT-----TCCCSEEEEECCEE
T ss_pred HHhhcC--CCceEEEEEECccccCc---chHHHHhc-----ccCCCEEEEEeccc
Confidence 444433 67999999999999998 89988863 24578899888754
No 35
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=94.23 E-value=0.0092 Score=51.97 Aligned_cols=46 Identities=15% Similarity=0.134 Sum_probs=31.1
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCCC
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~~ 57 (266)
+.|++.+.+++++|+|+|+++||+|+ .|++.+ .+++|.+++.+++.
T Consensus 199 ~~l~~~~~~~~~~i~~~~~~~EE~G~---~g~~~~-------~~~~~~~i~~D~~~ 244 (349)
T 2gre_A 199 KRLQDENVTLPYTTHFLISNNEEIGY---GGNSNI-------PEETVEYLAVDMGA 244 (349)
T ss_dssp HHHHHHTCCCSEEEEEEEESCC-------CCCCCC-------CTTEEEEEEECCCC
T ss_pred HHHHhccCCCCceEEEEEECcccCCc---hhhccc-------ccCCCEEEEEeccc
Confidence 45556666788999999999999998 687754 24567888888654
No 36
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=93.28 E-value=0.044 Score=48.11 Aligned_cols=39 Identities=15% Similarity=0.113 Sum_probs=31.3
Q ss_pred CCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCCC
Q 024502 11 LKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (266)
Q Consensus 11 ~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~~ 57 (266)
++++|+|+|+++||.|+ .|++.+.+. +.+|.+++.+++.
T Consensus 204 ~~~~v~~~~~~~EE~G~---~G~~~~~~~-----~~~d~~i~~d~~~ 242 (373)
T 1vhe_A 204 HPNIVYGVGTVQEEVGL---RGAKTAAHT-----IQPDIAFGVDVGI 242 (373)
T ss_dssp CSSEEEEEEESCCTTTS---HHHHHHHHH-----HCCSEEEEEEEEE
T ss_pred CCceEEEEEECCcccCh---hhHHHHhcc-----cCCCEEEEEeccc
Confidence 66999999999999998 899988542 3467888887653
No 37
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=93.20 E-value=4.3e-05 Score=65.32 Aligned_cols=55 Identities=7% Similarity=-0.089 Sum_probs=37.7
Q ss_pred CCCCcccccccccc-cccCceeccCcccc-eeecchhhhhhhhhHHHHHHHHHHHHHh
Q 024502 206 YLTLGRDDFRIFPL-RWQRHKIKFGRLKC-IFYLSIYKFISNLFSVLNKSLAAVISRL 261 (266)
Q Consensus 206 ~~~~gg~D~~~~~~-~~~~~~v~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (266)
.++.||+|++++.. ....+.+.|||..- .+.-..|+..+++-.. ..-+.++|.+|
T Consensus 291 ~~~~ggTDa~~~~~~~~Giptv~~G~g~~~~Ht~~E~v~i~dl~~~-~~ll~~~i~~L 347 (354)
T 2wzn_A 291 SPRPTGTDANVMQINKEGVATAVLSIPIRYMHSQVELADARDVDNT-IKLAKALLEEL 347 (354)
T ss_dssp CCSCCSSHHHHHHTSTTCCEEEEEEEEEBSTTSTTCEEEHHHHHHH-HHHHHHHHHHC
T ss_pred EecccccHHHHHHHhcCCCCEEEECcccCCCCcccEEEEHHHHHHH-HHHHHHHHHhC
Confidence 56789999998743 45677888999863 3445778877776643 34456666665
No 38
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=92.57 E-value=0.064 Score=46.58 Aligned_cols=39 Identities=21% Similarity=0.090 Sum_probs=31.6
Q ss_pred CCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCCC
Q 024502 11 LKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (266)
Q Consensus 11 ~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~~ 57 (266)
++++|+|+|+++||.|+ .|++.+... +.+|++++.|++.
T Consensus 200 ~~~~i~~~~~~~EE~g~---~G~~~~~~~-----~~~~~~i~~d~~~ 238 (353)
T 1y0y_A 200 AKADVYFVATVQEEVGL---RGARTSAFG-----IEPDYGFAIDVTI 238 (353)
T ss_dssp CSSEEEEEEESCCTTTS---HHHHHHHHH-----HCCSEEEEEEEEE
T ss_pred CCCeEEEEEECCcccch---hHHHHHhhc-----cCCCEEEEEeccc
Confidence 77999999999999998 899988642 3467888888654
No 39
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=90.13 E-value=0.14 Score=46.06 Aligned_cols=36 Identities=22% Similarity=0.266 Sum_probs=31.8
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHcc
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDG 40 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g 40 (266)
+.|++.+.+++++|+|+|..+||.|. .|++.+++..
T Consensus 282 ~~l~~~~~~~~~~i~f~~~~~EE~gl---~Gs~~~~~~~ 317 (444)
T 3iib_A 282 KHILDLPQKPERTIRVVLYAAEELGL---LGGKTYAKEH 317 (444)
T ss_dssp HHHHTSSSCCSEEEEEEEESCGGGTS---HHHHHHHHHT
T ss_pred HHHHhcCCCCCCeEEEEEECCcccCC---cCHHHHHHhh
Confidence 56777777899999999999999998 8999999864
No 40
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=88.86 E-value=0.51 Score=40.23 Aligned_cols=52 Identities=13% Similarity=0.196 Sum_probs=34.3
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCC--------C--CchHHHHHHccccCCCCCCcEEEEeC
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAI--------T--GVGVDALVKDGLLNKLKGGPLYWIDT 55 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~--------~--~~Ga~~~i~~g~~~~~~~d~~i~~e~ 55 (266)
+.|++.+ ++++|.|+|..+||.|.. + ..|++++.+.......++.+++..+.
T Consensus 140 r~l~~~~--~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlD~ 201 (309)
T 3tc8_A 140 RQIGQKA--PGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPHVPNYTAEYGILLDM 201 (309)
T ss_dssp HHHHHSC--CSSEEEEEEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCSSTTCCCSEEEEEES
T ss_pred HHHHhCC--CCCcEEEEEECccccccccccccccccccchhHHHHHhCCCccccceEEEEEecc
Confidence 4555553 789999999999999750 0 05999999864332233345666663
No 41
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=88.21 E-value=0.46 Score=40.64 Aligned_cols=52 Identities=13% Similarity=0.153 Sum_probs=32.8
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCC---------CC--chHHHHHHccccCCCCCCcEEEEeC
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAI---------TG--VGVDALVKDGLLNKLKGGPLYWIDT 55 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~---------~~--~Ga~~~i~~g~~~~~~~d~~i~~e~ 55 (266)
+.|++.+ ++++|.|+|..+||.|.. +- .|++++.+.......++.+++..+.
T Consensus 142 r~l~~~~--~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlDm 204 (314)
T 3gux_A 142 RQIQKEQ--PALGIDIVFFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPHVQNYNARYGILLDM 204 (314)
T ss_dssp HHHHHSC--CSSEEEEEEECSCCC-----------CTTSCHHHHHHHHSCSSTTCCCSEEEEEES
T ss_pred HHHHhCC--CCCcEEEEEECCccccccccccccccccccchhHHHHHhCCcccccceeEEEEEec
Confidence 4555553 789999999999999750 00 4899998864322233445566653
No 42
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=83.13 E-value=0.68 Score=31.29 Aligned_cols=54 Identities=7% Similarity=0.023 Sum_probs=38.6
Q ss_pred CCCCcccccccccccccCceeccCcccc----eeecchhhhhhhhhHHHHHHHHHHHHHh
Q 024502 206 YLTLGRDDFRIFPLRWQRHKIKFGRLKC----IFYLSIYKFISNLFSVLNKSLAAVISRL 261 (266)
Q Consensus 206 ~~~~gg~D~~~~~~~~~~~~v~~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (266)
..+.|++|+++|.. ...+.+.|||+.. .+-.+.|+-.+++...-. -+.++|.++
T Consensus 21 ~~~~g~TDar~~~~-~gip~v~fGPg~~~~~~~H~~dE~v~i~~l~~~~~-iy~~~i~~~ 78 (88)
T 1q7l_B 21 EIMPAAGDNRYIRA-VGVPALGFSPMNRTPVLLHDHDERLHEAVFLRGVD-IYTRLLPAL 78 (88)
T ss_dssp EECCSCSHHHHHHH-TTCCEEEECCCCSCCCCTTSTTCEEEHHHHHHHHH-HHHHHHHHH
T ss_pred eeeceeCcHHHHHH-cCCCEEEECCCCCCcccccCCCCeeEHHHHHHHHH-HHHHHHHHH
Confidence 45689999999975 4688999999852 566778888877776443 344555544
No 43
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=80.93 E-value=0.8 Score=39.25 Aligned_cols=28 Identities=25% Similarity=0.288 Sum_probs=23.2
Q ss_pred CCCCceEEEEEEcCCCC--------CCCCCchHHHHHHc
Q 024502 9 LKLKSTVIAVFIASEEN--------SAITGVGVDALVKD 39 (266)
Q Consensus 9 ~~~~~~v~~if~~dEE~--------g~~~~~Ga~~~i~~ 39 (266)
..++++|.|+|..+||. |. .|++.+++.
T Consensus 155 ~~~~~~i~~~~~~~EE~~~~~~~~~gl---~Gs~~~~~~ 190 (329)
T 2afw_A 155 SKPDLSLQLIFFDGEEAFLHWSPQDSL---YGSRHLAAK 190 (329)
T ss_dssp --CCEEEEEEEESCCSCSSSCCSSSSC---HHHHHHHHH
T ss_pred CCCCccEEEEEecCcccccccCCCccc---hhHHHHHHH
Confidence 46889999999999998 65 799999875
No 44
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=80.54 E-value=1 Score=40.00 Aligned_cols=34 Identities=18% Similarity=0.250 Sum_probs=27.5
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHcc
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDG 40 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g 40 (266)
+.|++. .++++|+|+|..+||.|. .|++.+++..
T Consensus 253 ~~l~~~--~~~~~i~~~~~~~EE~g~---~Gs~~~~~~~ 286 (421)
T 2ek8_A 253 RVMSKL--KTDTELRFITFGAEENGL---IGSKKYAASL 286 (421)
T ss_dssp HHHTTS--CCSSEEEEEEESSSTTTS---HHHHHHHTTC
T ss_pred HHHhcc--CCCceEEEEEECCccccc---hhHHHHHHhC
Confidence 345543 568999999999999987 8999999753
No 45
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=79.77 E-value=1.5 Score=37.59 Aligned_cols=39 Identities=26% Similarity=0.163 Sum_probs=29.3
Q ss_pred CCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCCC
Q 024502 11 LKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (266)
Q Consensus 11 ~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~~ 57 (266)
+++++.++|+.+||.|+ .|++.... .+.+|.++..+++.
T Consensus 189 ~~~~~~~~~t~~EEvG~---~Ga~~~~~-----~i~~~~~i~~D~~~ 227 (348)
T 1ylo_A 189 LPAEVWLVASSSEEVGL---RGGQTATR-----AVSPDVAIVLDTAC 227 (348)
T ss_dssp CSSEEEEEEESCCTTSS---HHHHHHHH-----HHCCSEEEEECCCC
T ss_pred CCceEEEEEEcccccch---hHHHHhhc-----ccCCCEEEEEeccc
Confidence 56899999999999998 78876543 13457777777654
No 46
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=79.59 E-value=1.1 Score=37.99 Aligned_cols=30 Identities=17% Similarity=0.237 Sum_probs=25.3
Q ss_pred cCCCCceEEEEEEcCCCCC--------CCCCchHHHHHHcc
Q 024502 8 KLKLKSTVIAVFIASEENS--------AITGVGVDALVKDG 40 (266)
Q Consensus 8 ~~~~~~~v~~if~~dEE~g--------~~~~~Ga~~~i~~g 40 (266)
+.+++++|+|+|..+||.| . .|++.+++..
T Consensus 127 ~~~p~~tI~fv~fdaEE~G~~~~~~~~L---~GS~~~a~~~ 164 (312)
T 4f9u_A 127 RNRSDVGLMLIFFDGEEAFKEWTDADSV---YGSKHLAAKL 164 (312)
T ss_dssp GSCSSEEEEEEEESCCSCSSSCSSSSSC---HHHHHHHHHH
T ss_pred cCCCCceEEEEEecCccccccCCccccc---cChHHHHHHH
Confidence 4578999999999999987 4 6999998763
No 47
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=78.79 E-value=1.5 Score=38.01 Aligned_cols=39 Identities=15% Similarity=0.102 Sum_probs=29.5
Q ss_pred CCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCC
Q 024502 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA 56 (266)
Q Consensus 10 ~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~ 56 (266)
.+..+++++|+..||.|+ .|++..... +.||.++..+.+
T Consensus 201 ~~~~~v~~~ft~qEEvG~---~Ga~~a~~~-----~~pd~~i~~D~~ 239 (355)
T 3kl9_A 201 KLGNELYLGSNVQEEVGL---RGAHTSTTK-----FDPEVFLAVDCS 239 (355)
T ss_dssp CCSSEEEEEEESCCTTTS---HHHHHHHHH-----HCCSEEEEEEEE
T ss_pred CCCceEEEEEECccccCc---chhHHHHhc-----cCCCEEEEecCc
Confidence 477899999999999998 787665432 356778776643
No 48
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=77.68 E-value=3 Score=35.20 Aligned_cols=52 Identities=10% Similarity=0.143 Sum_probs=34.1
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCC-----------CchHHHHHHccccCCCCCCcEEEEeC
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAIT-----------GVGVDALVKDGLLNKLKGGPLYWIDT 55 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~-----------~~Ga~~~i~~g~~~~~~~d~~i~~e~ 55 (266)
|.|.+. +++++|+|+|..+||.|... -.|++++++....+..++.+.+..+.
T Consensus 140 r~l~~~--~~~~~i~~~~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~~~~~~i~~~inlDm 202 (309)
T 4fuu_A 140 RLVNQQ--QPELGIDIIFLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPHVQGYNARFGILLDM 202 (309)
T ss_dssp HHHHHS--CCSSEEEEEEECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCSSTTCCCSEEEEECS
T ss_pred HHHhhc--CCCCceEEEeecccccCccccccchhhhhhhhcchhHHHhcccccCcceEEEEeeec
Confidence 455543 57899999999999987310 04888888764433334446666663
No 49
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=76.36 E-value=1.5 Score=37.67 Aligned_cols=37 Identities=19% Similarity=0.184 Sum_probs=27.5
Q ss_pred CCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeC
Q 024502 11 LKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDT 55 (266)
Q Consensus 11 ~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~ 55 (266)
+++++.++|+.+||.|+ .|+.... ..+.+|.++..++
T Consensus 192 ~~~~~~~~~t~~EEvG~---~Ga~~~~-----~~i~~~~~i~~D~ 228 (346)
T 1vho_A 192 HPWDVYVVFSVQEETGC---LGALTGA-----YEINPDAAIVMDV 228 (346)
T ss_dssp CSSEEEEEEECTTSSSH---HHHHHTT-----CCCCCSEEEEEEE
T ss_pred CCceEEEEEECCcccch---hhHHHHh-----cccCCCEEEEeec
Confidence 56899999999999997 6777542 2356677776664
No 50
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=73.23 E-value=2.4 Score=36.73 Aligned_cols=44 Identities=11% Similarity=-0.048 Sum_probs=30.2
Q ss_pred hhhcccCCCCceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeC
Q 024502 3 KLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDT 55 (266)
Q Consensus 3 ~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~ 55 (266)
+|++.+. +..+++++|+..||+|+ .|++.... .+.||.++..+.
T Consensus 196 ~l~~l~~-~~~~v~~~ft~qEEVG~---~ga~~aa~-----~i~pd~~i~~Dv 239 (354)
T 2vpu_A 196 AARQLGD-HEADIYIVGSVQEEVGL---RGARVASY-----AINPEVGIAMDV 239 (354)
T ss_dssp HHHHCCC-CSSEEEEEECSCCTTTS---HHHHHHHH-----HHCCSEEEEEEE
T ss_pred HHHHhhc-CCCeEEEEEECCcccCc---cchhhhhc-----ccCCCEEEEecc
Confidence 3444432 67899999999999998 78765542 135677776653
No 51
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=71.16 E-value=1.8 Score=40.66 Aligned_cols=31 Identities=10% Similarity=0.140 Sum_probs=27.5
Q ss_pred ccCCCCceEEEEEEcCCCCCCCCCchHHHHHHcc
Q 024502 7 TKLKLKSTVIAVFIASEENSAITGVGVDALVKDG 40 (266)
Q Consensus 7 ~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g 40 (266)
.+.+++++|+|++..+||.|. .|+..++++.
T Consensus 320 ~g~~p~r~I~f~~~~~EE~gl---~GS~~~~~~~ 350 (640)
T 3kas_A 320 DGFQPSRSIIFASWSAGDFGS---VGATEWLEGY 350 (640)
T ss_dssp SCCCCSEEEEEEEESSGGGTS---HHHHHHHHHT
T ss_pred cCCCCCCcEEEEEECCcccCc---hhHHHHHHhh
Confidence 357899999999999999998 8999999864
No 52
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=68.10 E-value=2.8 Score=35.94 Aligned_cols=28 Identities=25% Similarity=0.252 Sum_probs=24.9
Q ss_pred CCCCceEEEEEEcCCCC--------CCCCCchHHHHHHc
Q 024502 9 LKLKSTVIAVFIASEEN--------SAITGVGVDALVKD 39 (266)
Q Consensus 9 ~~~~~~v~~if~~dEE~--------g~~~~~Ga~~~i~~ 39 (266)
..++++|.|+|..+||. |. .|++.+++.
T Consensus 159 ~~~~~~i~fv~~~~EE~f~~w~~~~gl---~GS~~~a~~ 194 (330)
T 3pb6_X 159 QAAPVTLQLLFLDGEEALKEWGPKDSL---YGSRHLAQL 194 (330)
T ss_dssp TTCSEEEEEEEESCCSCSSCCSTTSSC---HHHHHHHHH
T ss_pred CCCCCcEEEEEEcCcccccccCCCCCC---ccHHHHHHH
Confidence 57899999999999999 76 799999874
No 53
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=66.68 E-value=2.7 Score=39.95 Aligned_cols=31 Identities=16% Similarity=0.208 Sum_probs=27.3
Q ss_pred ccCCCCceEEEEEEcCCCCCCCCCchHHHHHHcc
Q 024502 7 TKLKLKSTVIAVFIASEENSAITGVGVDALVKDG 40 (266)
Q Consensus 7 ~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~i~~g 40 (266)
.+++++++|+|++..+||.|. .|+..++++.
T Consensus 365 ~g~~p~r~I~f~~~~~EE~Gl---~GS~~~~~~~ 395 (707)
T 3fed_A 365 KGWRPRRTIIFASWDAEEFGL---LGSTEWAEEN 395 (707)
T ss_dssp TTCCCSEEEEEEEESCGGGTS---HHHHHHHHHH
T ss_pred ccCCCCCCEEEEEeCCccccc---hhHHHHHHhc
Confidence 457899999999999999998 8999998753
No 54
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=66.10 E-value=5 Score=34.25 Aligned_cols=32 Identities=25% Similarity=0.192 Sum_probs=24.6
Q ss_pred cCCCCceEEEEEEcCCCCCCCC-----CchHHHHHHc
Q 024502 8 KLKLKSTVIAVFIASEENSAIT-----GVGVDALVKD 39 (266)
Q Consensus 8 ~~~~~~~v~~if~~dEE~g~~~-----~~Ga~~~i~~ 39 (266)
+.+++++|+|+|..+||.|... -.|++++.+.
T Consensus 151 ~~~p~rtI~fv~fdgEE~Gl~~~~~~~llGS~~~a~~ 187 (330)
T 4fai_A 151 LKKSKLSLMLLFFDGEEAFEEWGPKDSIYGARHLAKK 187 (330)
T ss_dssp GGTSSEEEEEEEESCCSCSSSCBTTBSCHHHHHHHHH
T ss_pred cCCCCccEEEEEeccccccccccccchhhhhHHHHhc
Confidence 3468899999999999987310 0499999875
No 55
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=64.68 E-value=5 Score=34.57 Aligned_cols=36 Identities=25% Similarity=0.224 Sum_probs=26.6
Q ss_pred CceEEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeC
Q 024502 12 KSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDT 55 (266)
Q Consensus 12 ~~~v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~ 55 (266)
..+++++|+..||+|+ .|++... ..+.||.++..+.
T Consensus 198 ~~~~~~~ft~qEEVG~---~Ga~~aa-----~~i~pd~~i~vDv 233 (343)
T 3isx_A 198 AVTLYGVFSVQEEVGL---VGASVAG-----YGVPADEAIAIDV 233 (343)
T ss_dssp SSEEEEEEECCCCTTS---CCSTTTG-----GGCCCSEEEEEEE
T ss_pred CCeEEEEEECCcccCc---hhHHHHh-----hcCCCCEEEEEeC
Confidence 5799999999999998 6765332 2356787776664
No 56
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=60.61 E-value=3.8 Score=34.76 Aligned_cols=39 Identities=18% Similarity=0.078 Sum_probs=26.5
Q ss_pred EEEEEEcCCCCCCCCCchHHHHHHccccCCCCCCcEEEEeCCC
Q 024502 15 VIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (266)
Q Consensus 15 v~~if~~dEE~g~~~~~Ga~~~i~~g~~~~~~~d~~i~~e~~~ 57 (266)
+.++|+++||.|+ .|++..... ..+.+++|+++..+++.
T Consensus 183 i~~~~t~~EEvG~---~Ga~~a~~~-~~~~~~~~~~i~~D~~~ 221 (321)
T 3cpx_A 183 GIIAFTCWEEHGG---GSVAYLARW-IYETFHVKQSLICDITW 221 (321)
T ss_dssp EEEEEESSTTTTC---CSHHHHHHH-HHHHHCCCEEEECCCEE
T ss_pred cEEEEECCccCch---hcchhhhhc-cccccCCCEEEEEeCcc
Confidence 8999999999998 677753210 01123567888888754
No 57
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=50.11 E-value=25 Score=22.61 Aligned_cols=33 Identities=9% Similarity=0.172 Sum_probs=26.9
Q ss_pred CeEEEEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 024502 143 GECTVSGDVRLTPFYNVTDVMKRLQEYVDDINE 175 (266)
Q Consensus 143 ~~a~~~~diR~~~~~~~~~v~~~i~~~i~~~~~ 175 (266)
+--++.+|+|...+...+...+++++.+...+.
T Consensus 15 dgqeieidirvstgkeleralqelekalaraga 47 (96)
T 2jvf_A 15 DGQEIEIDIRVSTGKELERALQELEKALARAGA 47 (96)
T ss_dssp TTEEEEEEEECCSSSHHHHHHHHHHHHHHHHTC
T ss_pred CCeEEEEEEEEcccHHHHHHHHHHHHHHHhccc
Confidence 445789999999999888888888888876653
No 58
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=47.37 E-value=22 Score=31.78 Aligned_cols=42 Identities=10% Similarity=-0.122 Sum_probs=33.7
Q ss_pred CceEeeEEEecCCCccceeCCeEEEEEEEeCCCCCCHHHHHHHHHHHHH
Q 024502 123 PSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVD 171 (266)
Q Consensus 123 ~~t~~~g~i~~gg~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~i~ 171 (266)
.+++|+|.++. ..+.+.+.+++|++.....+.+.+.+++.++
T Consensus 345 ~~s~nl~~~~~-------~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~ 386 (487)
T 2qyv_A 345 ETSLSIGVLKT-------EDNFVRSTMLVRSLIESGKSYVASLLKSLAS 386 (487)
T ss_dssp EEEEEEEEEEE-------CSSEEEEEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred EeccceEEEEE-------cCCeEEEEEEccCCCHHHHHHHHHHHHHHHH
Confidence 47888888873 3467899999999988888888888887765
No 59
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=45.76 E-value=9.5 Score=31.19 Aligned_cols=27 Identities=19% Similarity=0.210 Sum_probs=20.3
Q ss_pred CCCCcccccccccccccCceeccCcccc
Q 024502 206 YLTLGRDDFRIFPLRWQRHKIKFGRLKC 233 (266)
Q Consensus 206 ~~~~gg~D~~~~~~~~~~~~v~~G~~~~ 233 (266)
.++.||+|+++|++.. .+.+.|||...
T Consensus 212 ~~sgggtD~~~~~~~g-~p~~~~~~~~~ 238 (268)
T 3t68_A 212 LTTGGTSDGRFIAQMG-AQVVELGPVNA 238 (268)
T ss_dssp ESSCCCHHHHHHHHHT-CEEEECCSBCT
T ss_pred ecCccccHHHHHHhcC-CCEEEEeeCCC
Confidence 3467899999999654 46788888663
No 60
>1vje_A Autoinducer-2 production protein LUXS; structural genomics, hydrolase; 1.64A {Deinococcus radiodurans} SCOP: d.185.1.2 PDB: 1vgx_A 1inn_A 1j6v_A 1vh2_A
Probab=29.29 E-value=12 Score=28.48 Aligned_cols=20 Identities=5% Similarity=0.235 Sum_probs=14.4
Q ss_pred cccCceeccCcccce--eecch
Q 024502 220 RWQRHKIKFGRLKCI--FYLSI 239 (266)
Q Consensus 220 ~~~~~~v~~G~~~~~--~~~~~ 239 (266)
.....+|-||||+|. ||+..
T Consensus 69 nh~~~iId~sPMGCrTGFYlil 90 (166)
T 1vje_A 69 DHLEGVVDVSPMGARTGMYMAV 90 (166)
T ss_dssp HHCTTEEEEEECTTSSEEEEEE
T ss_pred cCCCCeEEECCcccccccEEEE
Confidence 344468899999995 77743
No 61
>1j6x_A Autoinducer-2 production protein LUXS; alpha-beta fold, signaling protein; 2.38A {Helicobacter pylori} SCOP: d.185.1.2
Probab=28.35 E-value=12 Score=28.39 Aligned_cols=20 Identities=20% Similarity=0.619 Sum_probs=14.3
Q ss_pred cccCceeccCcccce--eecch
Q 024502 220 RWQRHKIKFGRLKCI--FYLSI 239 (266)
Q Consensus 220 ~~~~~~v~~G~~~~~--~~~~~ 239 (266)
.....+|-||||+|. ||+..
T Consensus 67 nh~~~iId~sPMGCrTGFYlil 88 (160)
T 1j6x_A 67 NHANYVVDWSPMGCQTGFYLTV 88 (160)
T ss_dssp HHCSCEEEEEECTTSSEEEEEE
T ss_pred hCCCCeEEECCcCcchhcEEEE
Confidence 334468899999995 77643
No 62
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=22.80 E-value=44 Score=29.59 Aligned_cols=30 Identities=10% Similarity=0.037 Sum_probs=21.5
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCCCCCchHHHH
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDAL 36 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~~~~~Ga~~~ 36 (266)
++|.+.. ....+|+++| ..||+|+ .|+.-.
T Consensus 245 ~al~~~~-~~~~~v~~~f-d~EEVGs---~ga~gA 274 (428)
T 2ijz_A 245 EALLNAE-GDENCILVCT-DHEEVGS---CSHCGA 274 (428)
T ss_dssp THHHHTT-SCSSSCEEEE-CBSCTTT---TCHHHH
T ss_pred HHHHhcc-cCCceEEEEE-eccccCc---cchhhh
Confidence 4455544 4567898888 9999998 676654
No 63
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=21.67 E-value=31 Score=30.89 Aligned_cols=25 Identities=28% Similarity=0.389 Sum_probs=19.5
Q ss_pred hhhhcccCCCCceEEEEEEcCCCCCC
Q 024502 2 RKLGETKLKLKSTVIAVFIASEENSA 27 (266)
Q Consensus 2 k~L~~~~~~~~~~v~~if~~dEE~g~ 27 (266)
++|.+.. .+..+++++|+..||+|+
T Consensus 271 ~al~~~~-~~~~~~~~~~~d~EEVGs 295 (461)
T 2glj_A 271 EAMLEMK-NAKKTCITILVDKEEVGS 295 (461)
T ss_dssp HHHHTCC-SCSSCEEEEEECCGGGTC
T ss_pred HHHHhhc-cCCCeEEEEEEccCCCCC
Confidence 3455543 467899999999999998
No 64
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=20.32 E-value=49 Score=26.81 Aligned_cols=54 Identities=17% Similarity=0.170 Sum_probs=28.9
Q ss_pred CCCCcccccccccccccCceeccCcccce-eecchhhhhhhhhHHHHHHHHHHHHHh
Q 024502 206 YLTLGRDDFRIFPLRWQRHKIKFGRLKCI-FYLSIYKFISNLFSVLNKSLAAVISRL 261 (266)
Q Consensus 206 ~~~~gg~D~~~~~~~~~~~~v~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (266)
.++.||+|+++++. .-.+.+.|||...+ +.-..|+..+++-. +..-+.+++.+|
T Consensus 212 ~~~gggtDa~~~~~-~g~p~~~~~~~~~~~Hs~~E~v~~~d~~~-~~~ll~~~l~~l 266 (269)
T 4h2k_A 212 ETGGGTSDGRFIAL-MGAEVVEFGPLNSTIHKVNECVSVEDLGK-CGEIYHKMLVNL 266 (269)
T ss_dssp ECC--CHHHHHHHT-TTCEEEECCSBCTTTTSTTCEEEHHHHHH-HHHHHHHHHHHH
T ss_pred ecCCCCchHHHHHh-hCCCEEEEEeCCCCCcCCcccccHHHHHH-HHHHHHHHHHHH
Confidence 35678999999984 44677888887733 22333433333332 333344444443
Done!