Query 024516
Match_columns 266
No_of_seqs 117 out of 1116
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 09:38:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024516.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024516hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oox_A Putative 2OG-Fe(II) oxy 100.0 8.3E-57 2.8E-61 396.9 21.5 228 2-266 6-238 (312)
2 1gp6_A Leucoanthocyanidin diox 100.0 6.3E-54 2.2E-58 384.4 16.9 225 2-266 46-278 (356)
3 1odm_A Isopenicillin N synthas 100.0 5.9E-52 2E-56 368.5 19.0 231 2-266 8-260 (331)
4 1w9y_A 1-aminocyclopropane-1-c 100.0 1.4E-52 4.7E-57 370.4 12.5 215 1-266 2-224 (319)
5 1dcs_A Deacetoxycephalosporin 100.0 1.6E-51 5.5E-56 362.7 15.5 214 1-266 3-233 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 6.2E-51 2.1E-55 353.8 18.9 207 1-266 2-221 (280)
7 2dbn_A Hypothetical protein YB 81.2 1.8 6E-05 39.1 4.9 52 2-64 100-151 (461)
8 3o2g_A Gamma-butyrobetaine dio 73.1 3.4 0.00012 36.5 4.5 52 2-65 122-173 (388)
9 3dkq_A PKHD-type hydroxylase S 68.6 8.6 0.00029 31.7 5.6 55 205-262 103-174 (243)
10 3tht_A Alkylated DNA repair pr 67.0 6 0.00021 34.4 4.6 56 205-263 202-263 (345)
11 2opi_A L-fuculose-1-phosphate 59.1 5.4 0.00019 32.0 2.7 48 2-59 125-174 (212)
12 3i3q_A Alpha-ketoglutarate-dep 52.5 13 0.00044 29.9 3.9 55 205-262 109-172 (211)
13 1e4c_P L-fuculose 1-phosphate 52.5 7.3 0.00025 31.3 2.4 49 2-60 122-172 (215)
14 1pvt_A Sugar-phosphate aldolas 51.7 8.9 0.00031 31.3 2.8 49 2-60 161-211 (238)
15 2fk5_A Fuculose-1-phosphate al 51.2 10 0.00034 30.1 3.0 39 24-62 130-176 (200)
16 2da7_A Zinc finger homeobox pr 50.5 6.3 0.00022 25.9 1.3 42 151-192 13-54 (71)
17 1otj_A Alpha-ketoglutarate-dep 47.6 18 0.00062 29.9 4.2 36 25-63 30-65 (283)
18 2v9l_A Rhamnulose-1-phosphate 43.2 10 0.00034 31.8 1.9 37 24-60 191-229 (274)
19 4ay7_A Methylcobalamin\: coenz 42.0 38 0.0013 29.0 5.5 42 23-64 303-348 (348)
20 2irp_A Putative aldolase class 40.3 14 0.00048 29.3 2.2 39 22-60 148-191 (208)
21 1v7z_A Creatininase, creatinin 40.3 48 0.0017 27.2 5.7 37 21-57 93-132 (260)
22 3ghf_A Septum site-determining 39.8 40 0.0014 24.3 4.5 36 5-50 51-86 (120)
23 1oih_A Putative alkylsulfatase 39.5 29 0.00098 29.1 4.2 37 25-64 40-77 (301)
24 3itq_A Prolyl 4-hydroxylase, a 37.0 1E+02 0.0035 24.5 7.0 50 205-259 115-179 (216)
25 2nys_A AGR_C_3712P; SSPB, stri 36.8 26 0.0009 27.1 3.1 67 162-243 13-81 (176)
26 2iuw_A Alkylated repair protei 36.1 35 0.0012 27.7 4.1 56 205-262 130-203 (238)
27 2jig_A Prolyl-4 hydroxylase; h 35.8 66 0.0023 25.5 5.7 25 37-61 19-43 (224)
28 1m5a_B Insulin B chain; alpha 35.1 45 0.0016 17.8 3.0 19 24-42 9-27 (30)
29 3pvj_A Alpha-ketoglutarate-dep 34.1 50 0.0017 27.4 4.8 37 25-64 28-64 (277)
30 2qas_A SSPB, hypothetical prot 31.1 25 0.00086 26.7 2.2 67 162-243 21-89 (157)
31 3s57_A Alpha-ketoglutarate-dep 29.1 89 0.003 24.6 5.3 56 205-262 104-176 (204)
32 3qy9_A DHPR, dihydrodipicolina 28.3 47 0.0016 27.1 3.6 41 24-64 88-128 (243)
33 3r1j_A Alpha-ketoglutarate-dep 27.9 62 0.0021 27.2 4.4 37 25-64 34-71 (301)
34 3no4_A Creatininase, creatinin 27.2 1E+02 0.0035 25.5 5.5 40 21-60 102-144 (267)
35 3ocr_A Class II aldolase/adduc 27.1 38 0.0013 28.2 2.8 37 24-60 169-207 (273)
36 2x4k_A 4-oxalocrotonate tautom 27.0 56 0.0019 19.5 3.1 24 164-187 18-41 (63)
37 4f3y_A DHPR, dihydrodipicolina 26.5 52 0.0018 27.3 3.6 37 27-63 112-148 (272)
38 3ijp_A DHPR, dihydrodipicolina 25.5 57 0.0019 27.4 3.7 37 27-63 127-163 (288)
39 1zav_A 50S ribosomal protein L 24.8 1.7E+02 0.0059 22.3 6.2 41 21-61 6-47 (180)
40 3abf_A 4-oxalocrotonate tautom 24.1 72 0.0025 19.3 3.2 23 165-187 17-39 (64)
41 3m4r_A Uncharacterized protein 24.1 35 0.0012 27.4 2.0 34 25-58 167-203 (222)
42 2rdq_A 1-deoxypentalenic acid 23.9 93 0.0032 25.4 4.8 37 27-64 21-57 (288)
43 2z7b_A MLR6791 protein; class 22.2 50 0.0017 27.4 2.7 37 24-60 178-216 (270)
44 2j01_J 50S ribosomal protein L 22.0 1.7E+02 0.0059 22.2 5.6 40 21-60 4-45 (173)
45 2pa7_A DTDP-6-deoxy-3,4-keto-h 21.9 1.8E+02 0.0062 21.4 5.5 27 233-261 86-113 (141)
46 2opw_A Phyhd1 protein; double- 21.4 85 0.0029 25.7 4.0 35 29-64 7-41 (291)
47 3eat_X Pyoverdine biosynthesis 20.8 1.2E+02 0.0042 25.1 4.9 36 26-64 44-81 (293)
48 2opa_A Probable tautomerase YW 20.5 90 0.0031 18.6 3.1 22 164-185 15-36 (61)
No 1
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=8.3e-57 Score=396.86 Aligned_cols=228 Identities=22% Similarity=0.343 Sum_probs=199.4
Q ss_pred CCCeeeccccccCCCCCCchhHHHHHHHHHHHhhhccEEEEeCCCCCHHHHHHHHHHHHhhcCCCcccccccccCCCCCc
Q 024516 2 EVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFESPFHFKRLQERPNLHYQ 81 (266)
Q Consensus 2 ~iPvIDl~~l~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~ 81 (266)
+||||||+.+.+ .+.+++++|++||+++|||||+||||+.++++++++.+++||+||.|+|.++... ...+
T Consensus 6 ~iPvIDls~~~~--------~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~ 76 (312)
T 3oox_A 6 AIDPVSFSLYAK--------DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV-KGGA 76 (312)
T ss_dssp SSCCEETHHHHH--------CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS-GGGT
T ss_pred CCCeEEChHhcc--------cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC-CCCc
Confidence 599999999854 4678899999999999999999999999999999999999999999999999875 3456
Q ss_pred cccccCCccCCCCCchHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCC-CCCCccccCCCCCCCCCCCcchHHHHHH
Q 024516 82 VGVTPEGVEIPRSLVDEEMQEKFRAMPKESQPSIPIGPDPKWRYMWRVGPR-PSNTRFQELNSEPVIPDGFPEWKETMDS 160 (266)
Q Consensus 82 ~Gy~~~g~e~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~wP~~~~~fr~~~~~ 160 (266)
+||.+.|.|...+. ...+|+|.|+++.. +.+.++.....+|.||+.+|+||+++++
T Consensus 77 ~Gy~~~g~e~~~~~-----------------------~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~ 133 (312)
T 3oox_A 77 RGYIPFGVETAKGA-----------------------DHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSW 133 (312)
T ss_dssp SEEECCCCCCSTTS-----------------------CSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHH
T ss_pred cccccccceecCCC-----------------------CCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHH
Confidence 99999888765322 23468899988753 3333344455689999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCChhhHHhhhhCCCCCCcccCCCccccCCC----CccceeeccccCceeEEecCCCCce
Q 024516 161 WGHKMISAIEVVAEMAAIGFGLPKDAFTSLMKQGPHLLAPTGCDLRRYGKE----GTVFAGYHYDLNFLTIHGRSRFPGL 236 (266)
Q Consensus 161 y~~~~~~~a~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~~~~~~Yp~~----~~~~~~~HtD~~~lTll~q~~~~GL 236 (266)
|+++|.+++.+||++||++||+++++|.+.+..+.+.+| ++|||++ ..+|+++|||+|+||||+||+++||
T Consensus 134 y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr-----~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GL 208 (312)
T 3oox_A 134 LYNSLDGMGGKVLEAIATYLKLERDFFKPTVQDGNSVLR-----LLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGL 208 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCTTTTHHHHTTCCCEEE-----EEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCE
T ss_pred HHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhcCCcceee-----eEecCCCCCCcCCcCccceecCceEEEEeEcCcCce
Confidence 999999999999999999999999999999988888898 9999964 2489999999999999999999999
Q ss_pred EEecCCCcEEEccCCCCeEEEecCccccCC
Q 024516 237 NIWLRNGKKVEVKVPVGCLLIQTGKQVNPY 266 (266)
Q Consensus 237 qv~~~~g~W~~V~p~~g~~vVn~Gd~le~~ 266 (266)
||++++|+|++|+|+||++|||+||+||+|
T Consensus 209 qV~~~~g~W~~V~p~pg~~vVNiGD~l~~~ 238 (312)
T 3oox_A 209 EVLDRDGQWLPINPPPGCLVINIGDMLERL 238 (312)
T ss_dssp EEECTTSCEEECCCCSSCEEEEECHHHHHH
T ss_pred EEECCCCcEEECCCCCCeEEEEhHHHHHHH
Confidence 999899999999999999999999999975
No 2
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=6.3e-54 Score=384.42 Aligned_cols=225 Identities=16% Similarity=0.185 Sum_probs=194.6
Q ss_pred CCCeeeccccccCCCCCCchhHHHHHHHHHHHhhhccEEEEeCCCCCHHHHHHHHHHHHhhcCCCcccccccccCCC-CC
Q 024516 2 EVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFESPFHFKRLQERPNL-HY 80 (266)
Q Consensus 2 ~iPvIDl~~l~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~-~~ 80 (266)
+||||||+.|.++++ +.+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|.++..... ..
T Consensus 46 ~iPvIDls~l~~~~~----~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~ 121 (356)
T 1gp6_A 46 QVPTIDLKNIESDDE----KIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGK 121 (356)
T ss_dssp CCCEEECTTTTCSCH----HHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTB
T ss_pred CCCEEEchhccCCCh----HHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccC
Confidence 499999999876543 4578899999999999999999999999999999999999999999999999987643 34
Q ss_pred ccccccCCccCCCCCchHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCCccccCCCCCCCCCCCcchHHHHHH
Q 024516 81 QVGVTPEGVEIPRSLVDEEMQEKFRAMPKESQPSIPIGPDPKWRYMWRVGPRPSNTRFQELNSEPVIPDGFPEWKETMDS 160 (266)
Q Consensus 81 ~~Gy~~~g~e~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~ 160 (266)
++||.+.+.+.. ....+|+|.|.++..|.. ...+|.||+.+|+||+.+++
T Consensus 122 ~~Gy~~~~~~~~-------------------------~~~~d~kE~~~~~~~p~~-----~~~~~~wP~~~~~fr~~~~~ 171 (356)
T 1gp6_A 122 IQGYGSKLANNA-------------------------SGQLEWEDYFFHLAYPEE-----KRDLSIWPKTPSDYIEATSE 171 (356)
T ss_dssp CSEEECCCCCST-------------------------TCCCCSCEEEEEEEESGG-----GCCGGGSCCSSTTHHHHHHH
T ss_pred ccccCcCcccCC-------------------------CCCCChhheeeeecCCcc-----ccccccCCCcchhhhHHHHH
Confidence 689986544321 123569998888754321 13568999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCChhhHHhhhh---CCCCCCcccCCCccccCCC----CccceeeccccCceeEEecCCC
Q 024516 161 WGHKMISAIEVVAEMAAIGFGLPKDAFTSLMK---QGPHLLAPTGCDLRRYGKE----GTVFAGYHYDLNFLTIHGRSRF 233 (266)
Q Consensus 161 y~~~~~~~a~~ll~~la~~Lgl~~~~f~~~~~---~~~~~lr~~~~~~~~Yp~~----~~~~~~~HtD~~~lTll~q~~~ 233 (266)
|++.|.+++.+||++|+++||+++++|.+.+. ...+.|| ++|||++ ..+|+++|||+|+||||+|+++
T Consensus 172 y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lr-----l~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~v 246 (356)
T 1gp6_A 172 YAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMK-----INYYPKCPQPELALGVEAHTDVSALTFILHNMV 246 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEE-----EEEECCCSSTTTCCSEEEECCCSSEEEEEECSC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceee-----eeecCCCCCcccccCcCCccCCCeEEEEEEcCC
Confidence 99999999999999999999999999999887 3567888 9999964 3689999999999999999999
Q ss_pred CceEEecCCCcEEEccCCCCeEEEecCccccCC
Q 024516 234 PGLNIWLRNGKKVEVKVPVGCLLIQTGKQVNPY 266 (266)
Q Consensus 234 ~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~le~~ 266 (266)
+||||+ ++|+|++|+|.||++|||+||+||+|
T Consensus 247 ~GLQV~-~~g~Wi~V~p~pgalvVNiGD~l~~~ 278 (356)
T 1gp6_A 247 PGLQLF-YEGKWVTAKCVPDSIVMHIGDTLEIL 278 (356)
T ss_dssp CCEEEE-ETTEEEECCCCTTCEEEEECHHHHHH
T ss_pred CCeEEe-cCCcEEECcCCCCeEEEEeccHHHHh
Confidence 999998 68999999999999999999999975
No 3
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=5.9e-52 Score=368.54 Aligned_cols=231 Identities=15% Similarity=0.207 Sum_probs=192.0
Q ss_pred CCCeeeccccccCCCCCCchhHHHHHHHHHHHhhhccEEEEeCCCCCHHHHHHHHHHHHhh-cCCCcccccccccCCCCC
Q 024516 2 EVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKY-FESPFHFKRLQERPNLHY 80 (266)
Q Consensus 2 ~iPvIDl~~l~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~~~~~ 80 (266)
+||||||+.|.++++ +.+.+++++|.+||+++|||||+|||| +++++++.+++| |+||.|+|.++..
T Consensus 8 ~iPvIDls~l~~~~~----~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~----- 75 (331)
T 1odm_A 8 NVPKIDVSPLFGDDQ----AAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI----- 75 (331)
T ss_dssp CCCEEECGGGGSSCH----HHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-----
T ss_pred CCCEEEchHhcCCCh----HHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-----
Confidence 699999999977654 567889999999999999999999999 999999999999 9999999999965
Q ss_pred ccccccCCccCCCCCchHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCC-CCc-c---ccCCCCCCCCCC--Ccc
Q 024516 81 QVGVTPEGVEIPRSLVDEEMQEKFRAMPKESQPSIPIGPDPKWRYMWRVGPRPS-NTR-F---QELNSEPVIPDG--FPE 153 (266)
Q Consensus 81 ~~Gy~~~g~e~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~---~~~~~~n~wP~~--~~~ 153 (266)
+||.+.+.|...... +. ......+|+|.|.++.... ..+ . ..+..+|.||+. +|+
T Consensus 76 -~Gy~~~~~e~~~~~~---------------~~--~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~ 137 (331)
T 1odm_A 76 -RAYNKEHQDQVRAGY---------------YL--SIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPG 137 (331)
T ss_dssp -TTTCTTCTTCSSSEE---------------EC--CBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTT
T ss_pred -cCCCcCCcccccccc---------------cc--ccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChH
Confidence 699988877532110 00 0012346899988885421 111 0 013457899987 999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHhhhhCCCCCCcccCCCccccC------C---C----C-ccceeec
Q 024516 154 WKETMDSWGHKMISAIEVVAEMAAIGFGLPKDAFTSLMKQGPHLLAPTGCDLRRYG------K---E----G-TVFAGYH 219 (266)
Q Consensus 154 fr~~~~~y~~~~~~~a~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~~~~~~Yp------~---~----~-~~~~~~H 219 (266)
||+++++|++.|.+++.+||++|+++||+++++|.+.+..+.+.+|| .++||| + + . .+|+++|
T Consensus 138 fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~---~l~~YP~~~~~~p~~~~~~~~~~~~g~~~H 214 (331)
T 1odm_A 138 FQDFAEQYYWDVFGLSSALLKGYALALGKEENFFARHFKPDDTLASV---VLIRYPYLDPYPEAAIKTAADGTKLSFEWH 214 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTGGGCCTTTCCCEE---EEEEECCCSSCCGGGCEECTTSCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCcHHHHHH---HHhhCCCcccccccccCCCccccccccccc
Confidence 99999999999999999999999999999999999988776666642 289998 5 2 2 6899999
Q ss_pred cccCceeEEecCCCCceEEecCCCcEEEccCCCCeEEEecCccccCC
Q 024516 220 YDLNFLTIHGRSRFPGLNIWLRNGKKVEVKVPVGCLLIQTGKQVNPY 266 (266)
Q Consensus 220 tD~~~lTll~q~~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~le~~ 266 (266)
||+|+||||+|++++||||++++| |++|+|+||++|||+||+||+|
T Consensus 215 tD~g~lTlL~qd~v~GLQV~~~~g-Wi~V~p~pgalvVNiGD~l~~~ 260 (331)
T 1odm_A 215 EDVSLITVLYQSNVQNLQVETAAG-YQDIEADDTGYLINCGSYMAHL 260 (331)
T ss_dssp CCSSSEEEEEECSSCCEEEEETTE-EEECCCCTTSEEEEECHHHHHH
T ss_pred cCCCeEEEEeeCCCCCEEEEcCCC-eEECCCCCCeEEEEccHHHHHH
Confidence 999999999999999999998899 9999999999999999999975
No 4
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=1.4e-52 Score=370.39 Aligned_cols=215 Identities=14% Similarity=0.169 Sum_probs=186.7
Q ss_pred CCCCeeeccccccCCCCCCchhHHHHHHHHHHHhhhccEEEEeCCCCCHHHHHHHHHHHHhhcCCCcccccccccCCCCC
Q 024516 1 MEVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFESPFHFKRLQERPNLHY 80 (266)
Q Consensus 1 ~~iPvIDl~~l~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~ 80 (266)
++||||||+.+.. ..+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|.++...
T Consensus 2 ~~iPvIDls~l~~-------~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~---- 70 (319)
T 1w9y_A 2 ENFPIISLDKVNG-------VERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA---- 70 (319)
T ss_dssp CCCCEEEGGGGGS-------TTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
T ss_pred CCCCEEECcccCc-------ccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC----
Confidence 3599999999852 35788999999999999999999999999999999999999999999999998643
Q ss_pred ccccccCCccCCCCCchHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCCccccCCCCCCCCCCCcchHHHHHH
Q 024516 81 QVGVTPEGVEIPRSLVDEEMQEKFRAMPKESQPSIPIGPDPKWRYMWRVGPRPSNTRFQELNSEPVIPDGFPEWKETMDS 160 (266)
Q Consensus 81 ~~Gy~~~g~e~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~ 160 (266)
.+||.+.+.|. ...+|+|.|.++..|. ..+|.||+.+|+||+.+++
T Consensus 71 ~~Gy~~~~~e~---------------------------~~~d~ke~~~~~~~p~-------~~~~~wP~~~~~fr~~~~~ 116 (319)
T 1w9y_A 71 SKALEGVQAEV---------------------------TDMDWESTFFLKHLPI-------SNISEVPDLDEEYREVMRD 116 (319)
T ss_dssp HHHHTTCCCCG---------------------------GGCCCCEEEEEEEESC-------CGGGGCTTCCHHHHHHHHH
T ss_pred CCCCCcccccC---------------------------CCCChhhheeeecCCc-------ccccccccchhHHHHHHHH
Confidence 26888765442 1235889888775432 1357899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCChhhHHhhhhC---CCCCCcccCCCccccCCCC----ccceeeccccCceeEEecC-C
Q 024516 161 WGHKMISAIEVVAEMAAIGFGLPKDAFTSLMKQ---GPHLLAPTGCDLRRYGKEG----TVFAGYHYDLNFLTIHGRS-R 232 (266)
Q Consensus 161 y~~~~~~~a~~ll~~la~~Lgl~~~~f~~~~~~---~~~~lr~~~~~~~~Yp~~~----~~~~~~HtD~~~lTll~q~-~ 232 (266)
|++.|.+++.+||++|+++||+++++|.+.+.. ..+.+| ++|||++. ..|+++|||+|+||||+|| +
T Consensus 117 y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lr-----l~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~ 191 (319)
T 1w9y_A 117 FAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTK-----VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDK 191 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEE-----EEECCCCSCGGGGSSCCCBCCSSSEEEEEESSS
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccceeE-----EEecCCCcccccccccccccCCCceEEEEecCC
Confidence 999999999999999999999999999998874 335787 99999753 6899999999999999995 7
Q ss_pred CCceEEecCCCcEEEccCCCCeEEEecCccccCC
Q 024516 233 FPGLNIWLRNGKKVEVKVPVGCLLIQTGKQVNPY 266 (266)
Q Consensus 233 ~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~le~~ 266 (266)
++||||+ ++|+|++|+|.||++|||+||+||+|
T Consensus 192 v~GLQV~-~~g~Wi~V~p~pgalvVNiGD~l~~~ 224 (319)
T 1w9y_A 192 VSGLQLL-KDGQWIDVPPMRHSIVVNLGDQLEVI 224 (319)
T ss_dssp CCCEEEE-ETTEEEECCCCTTCEEEEECHHHHHH
T ss_pred CCeeeEe-eCCeEEEcccCCCcEEEEhHHHHHHH
Confidence 9999996 78999999999999999999999975
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.6e-51 Score=362.70 Aligned_cols=214 Identities=19% Similarity=0.245 Sum_probs=175.6
Q ss_pred CCCCeeeccccccCCCCCCchhHHHHHHHHHHHhhhccEEEEeCCCCCHHHHHHHHHHHHhhcCCC-cccccccccCCCC
Q 024516 1 MEVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFESP-FHFKRLQERPNLH 79 (266)
Q Consensus 1 ~~iPvIDl~~l~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~~~~ 79 (266)
++||||||+.+.+++. .++|.+||+++|||||+||||+.++++++++.+++||+|| .|+|.++......
T Consensus 3 ~~iPvIDls~l~~~~~----------~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~ 72 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLH----------QDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPT 72 (311)
T ss_dssp CCCCEEEHHHHHTTCS----------HHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCC
T ss_pred CCCcEEEchhhcCCCH----------HHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCC
Confidence 3699999999876432 1299999999999999999999999999999999999999 9999999877555
Q ss_pred CccccccCCccCCCCCchHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCCccccCCCCCCCCCCCcchHHHHH
Q 024516 80 YQVGVTPEGVEIPRSLVDEEMQEKFRAMPKESQPSIPIGPDPKWRYMWRVGPRPSNTRFQELNSEPVIPDGFPEWKETMD 159 (266)
Q Consensus 80 ~~~Gy~~~g~e~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~ 159 (266)
.++||.+.+.|......+ .....+|+|.|.++.. +|.|| +|+||+.++
T Consensus 73 ~~~Gy~~~~~e~~~~~~~-------------------~~~~~d~~E~~~~~~~-----------~n~wP--~~~fr~~~~ 120 (311)
T 1dcs_A 73 MRRGFTGLESESTAQITN-------------------TGSYSDYSMCYSMGTA-----------DNLFP--SGDFERIWT 120 (311)
T ss_dssp SSSEEEEC------------------------------------CEEEEECSS-----------SCCCS--CHHHHHHHH
T ss_pred CCCceeeccccccccccC-------------------CCCCCCcceeeeccCC-----------CCCCC--ChHHHHHHH
Confidence 579999888765311000 0123469999988742 57899 899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCC----ChhhHHhhhhCCCCCCcccCCCccccCCCC--------ccceeeccccCceeE
Q 024516 160 SWGHKMISAIEVVAEMAAIGFGL----PKDAFTSLMKQGPHLLAPTGCDLRRYGKEG--------TVFAGYHYDLNFLTI 227 (266)
Q Consensus 160 ~y~~~~~~~a~~ll~~la~~Lgl----~~~~f~~~~~~~~~~lr~~~~~~~~Yp~~~--------~~~~~~HtD~~~lTl 227 (266)
+|++.|.+++.+||++|+++||+ ++++|.+. .+.+| ++|||++. .+|+++|||+|+|||
T Consensus 121 ~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~~~----~~~lr-----l~~YPp~~~~~~~~~~~~g~~~HtD~g~lTl 191 (311)
T 1dcs_A 121 QYFDRQYTASRAVAREVLRATGTEPDGGVEAFLDC----EPLLR-----FRYFPQVPEHRSAEEQPLRMAPHYDLSMVTL 191 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHHSC----CCEEE-----EEEECC-----------CCEEEEEECSSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHhhc----chhhh-----eecCCCCCcccccCccccccccccCCCeEEE
Confidence 99999999999999999999999 88888765 56788 99999642 567999999999999
Q ss_pred EecC-CCCc---eEEecCCCcEEEccCCCCeEEEecCccccCC
Q 024516 228 HGRS-RFPG---LNIWLRNGKKVEVKVPVGCLLIQTGKQVNPY 266 (266)
Q Consensus 228 l~q~-~~~G---Lqv~~~~g~W~~V~p~~g~~vVn~Gd~le~~ 266 (266)
|+|+ +++| |||++ +|+|++|+|+||++|||+||+||+|
T Consensus 192 L~qd~~v~G~~~LqV~~-~g~W~~V~p~pg~lvVNiGD~l~~~ 233 (311)
T 1dcs_A 192 IQQTPCANGFVSLQAEV-GGAFTDLPYRPDAVLVFCGAIATLV 233 (311)
T ss_dssp EEEECCTTCCCCEEEEE-TTEEEECCCCTTCEEEEECHHHHHH
T ss_pred EecCCCCCCceeEEEEe-CCEEEeCcCCCCeEEEEHHHHHHHH
Confidence 9998 8999 99997 8999999999999999999999975
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=6.2e-51 Score=353.84 Aligned_cols=207 Identities=17% Similarity=0.180 Sum_probs=170.3
Q ss_pred CCCCeeeccccccCCCCCCchhHHHHHHHHHHHhhhccEEEEeCCCCCHHHHHHHHHHHHhhcCCCcccccccccCCCCC
Q 024516 1 MEVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFESPFHFKRLQERPNLHY 80 (266)
Q Consensus 1 ~~iPvIDl~~l~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~ 80 (266)
|+||||||+.. +.+++|.+||+++|||||+||||+.++++++++.+++||++ ++|+++..... .
T Consensus 2 ~~IPvIDls~~-------------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~-~ 65 (280)
T 3on7_A 2 MKLETIDYRAA-------------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRE-T 65 (280)
T ss_dssp --CCEEETTST-------------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTT-T
T ss_pred CCCCEEECCCh-------------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCC-C
Confidence 78999999962 24789999999999999999999999999999999999997 78888876543 3
Q ss_pred ccccccCC-ccCCCCCchHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCCccccCCCCCCCCCCCcchHHHHH
Q 024516 81 QVGVTPEG-VEIPRSLVDEEMQEKFRAMPKESQPSIPIGPDPKWRYMWRVGPRPSNTRFQELNSEPVIPDGFPEWKETMD 159 (266)
Q Consensus 81 ~~Gy~~~g-~e~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~ 159 (266)
++||.+.+ .|+..+. ...+|+|.|++. .||..+|+||++++
T Consensus 66 ~~GY~~~~~~e~~~~~-----------------------~~~D~kE~~~~~---------------p~~~~p~~fr~~~~ 107 (280)
T 3on7_A 66 HDGFFPASISETAKGH-----------------------TVKDIKEYYHVY---------------PWGRIPDSLRANIL 107 (280)
T ss_dssp CCEEECCC-------------------------------CCCCSCEEEEEC---------------TTSCCCGGGHHHHH
T ss_pred CCccccCccccccCCC-----------------------CcccHHHHHhcC---------------CCCCCCHHHHHHHH
Confidence 59998876 4433211 124588877543 36667789999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCh--hh---HHhhhhCCC-CCCcccCCCccccCCCC------ccceeeccccCceeE
Q 024516 160 SWGHKMISAIEVVAEMAAIGFGLPK--DA---FTSLMKQGP-HLLAPTGCDLRRYGKEG------TVFAGYHYDLNFLTI 227 (266)
Q Consensus 160 ~y~~~~~~~a~~ll~~la~~Lgl~~--~~---f~~~~~~~~-~~lr~~~~~~~~Yp~~~------~~~~~~HtD~~~lTl 227 (266)
+|+++|.+++.+||++||++||++. .+ |.+.+..+. +.+| ++|||++. .+|+++|||+|+|||
T Consensus 108 ~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~~~lr-----~~~YP~~~~~~~~~~~g~~~HtD~g~lTl 182 (280)
T 3on7_A 108 AYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMIANSHKTLLR-----ILHYPPMTGDEEMGAIRAAAHEDINLITV 182 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHTTCSSCEEE-----EEEECCCCTTCCCCSEEEEEECCCSSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHhcCCccceEE-----EEECCCCCCccccCcccccCCCCCCeEEE
Confidence 9999999999999999999999763 33 566665554 7788 99999642 589999999999999
Q ss_pred EecCCCCceEEecCCCcEEEccCCCCeEEEecCccccCC
Q 024516 228 HGRSRFPGLNIWLRNGKKVEVKVPVGCLLIQTGKQVNPY 266 (266)
Q Consensus 228 l~q~~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~le~~ 266 (266)
|+|++++||||++++|+|++|+|.||++|||+||+||+|
T Consensus 183 L~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~ 221 (280)
T 3on7_A 183 LPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEA 221 (280)
T ss_dssp EECCSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHH
T ss_pred EEecCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHH
Confidence 999999999999889999999999999999999999975
No 7
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=81.22 E-value=1.8 Score=39.13 Aligned_cols=52 Identities=17% Similarity=0.222 Sum_probs=40.2
Q ss_pred CCCeeeccccccCCCCCCchhHHHHHHHHHHHhhhccEEEEeCCCCCHHHHHHHHHHHHhhcC
Q 024516 2 EVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFE 64 (266)
Q Consensus 2 ~iPvIDl~~l~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~~~~~~~~~~~~fF~ 64 (266)
-||.||++++.++.. .....+.+++.|++.|+|. ||.+...+..+...+|.+
T Consensus 100 ~iP~i~f~di~~~~~----------s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 100 VWPVLSYADIKAGHV----------TAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp SSCEEEHHHHHHTCC----------CHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CcceecHHHhcCCCC----------CHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 389999999876532 2334567778899999987 899888888888888764
No 8
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=73.10 E-value=3.4 Score=36.51 Aligned_cols=52 Identities=12% Similarity=0.137 Sum_probs=38.7
Q ss_pred CCCeeeccccccCCCCCCchhHHHHHHHHHHHhhhccEEEEeCCCCCHHHHHHHHHHHHhhcCC
Q 024516 2 EVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFES 65 (266)
Q Consensus 2 ~iPvIDl~~l~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~~~~~~~~~~~~fF~l 65 (266)
++|.||++++... .+...++.+++.++|++.+.+..++.+... +.++.|-.+
T Consensus 122 ~~~~~~~~~~l~~---------d~~~~~~~~~l~~~Gvv~frg~~~~~~~~~---~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRY---------DEHAYKWLSTLKKVGIVRLTGASDKPGEVS---KLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHC---------HHHHHHHHHHHHHHSEEEEECCCSSTTHHH---HHHHHHSCC
T ss_pred CCCccCHHHHhcC---------HHHHHHHHHHHHhcCEEEEeCCCCCHHHHH---HHHHHhCCC
Confidence 5889999887642 366888999999999999999988755433 445555443
No 9
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=68.60 E-value=8.6 Score=31.67 Aligned_cols=55 Identities=25% Similarity=0.299 Sum_probs=34.0
Q ss_pred ccccCCCCccceeeccccC-----------ceeEEe--cC----CCCceEEecCCCcEEEccCCCCeEEEecCcc
Q 024516 205 LRRYGKEGTVFAGYHYDLN-----------FLTIHG--RS----RFPGLNIWLRNGKKVEVKVPVGCLLIQTGKQ 262 (266)
Q Consensus 205 ~~~Yp~~~~~~~~~HtD~~-----------~lTll~--q~----~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~ 262 (266)
+.+|.++.- ..+|.|.. .+|+++ .+ +-|.|.+.+..+ =..|+|..|.+|+.-...
T Consensus 103 ~~rY~~G~~--y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~-~~~V~P~~G~~v~F~s~~ 174 (243)
T 3dkq_A 103 FNRYQGGET--FGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYG-QQSIKLSAGSLVLYPSSS 174 (243)
T ss_dssp EEEECTTCE--EEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTE-EEEECCCTTCEEEEETTS
T ss_pred EEEECCCCe--eccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCC-cEEEecCCCEEEEECCCC
Confidence 777876543 46777753 456643 23 125566654433 367999999988876543
No 10
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=66.95 E-value=6 Score=34.42 Aligned_cols=56 Identities=20% Similarity=0.229 Sum_probs=41.1
Q ss_pred ccccCCCCccceeeccccC------ceeEEecCCCCceEEecCCCcEEEccCCCCeEEEecCccc
Q 024516 205 LRRYGKEGTVFAGYHYDLN------FLTIHGRSRFPGLNIWLRNGKKVEVKVPVGCLLIQTGKQV 263 (266)
Q Consensus 205 ~~~Yp~~~~~~~~~HtD~~------~lTll~q~~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~l 263 (266)
++.|.++. +++.|.|-. ..|+-+ ....-+.+..++|.++.|...+|.++|+-|+.=
T Consensus 202 vN~Y~~G~--~I~~H~D~~~~~~~~I~slSL-G~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r 263 (345)
T 3tht_A 202 INQYEPGQ--GIPAHIDTHSAFEDEIVSLSL-GSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESR 263 (345)
T ss_dssp EEEECTTC--CEEEECCCTTTBCSCEEEEEE-SSCEEEEEECTTSCEEEEEECTTEEEEECTHHH
T ss_pred EEEecCCC--CEeeccCCchhcCCeEEEEEC-CCceeEEEccCCCceEEEEcCCCcEEEEChHHh
Confidence 78898754 899999973 333323 334566666556789999999999999999753
No 11
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=59.06 E-value=5.4 Score=31.95 Aligned_cols=48 Identities=23% Similarity=0.324 Sum_probs=32.8
Q ss_pred CCCeeeccccccCCCCCCchhHHHHHHHHHHHhhhccEEEEeCCCCCH--HHHHHHHHHH
Q 024516 2 EVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTV--EDNDRFLDMM 59 (266)
Q Consensus 2 ~iPvIDl~~l~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~--~~~~~~~~~~ 59 (266)
.||++++... ...++++.+.+++.+.-.+.+.|||+-. +.+.+++..+
T Consensus 125 ~v~~~~y~~~----------g~~~la~~i~~~l~~~~avll~nHG~~~~G~t~~eA~~~~ 174 (212)
T 2opi_A 125 EIPVIPYYRP----------GSPELAKAVVEAMLKHNSVLLTNHGQVVCGKDFDQVYERA 174 (212)
T ss_dssp CCCEECCCCT----------TCHHHHHHHHHHTSSCSEEEETTTEEEEEESSHHHHHHHH
T ss_pred CeEEEcCCCC----------CcHHHHHHHHHHhccCCEEEEcCCCcEEEcCCHHHHHHHH
Confidence 4788877642 2246788899999888899999999632 3444444443
No 12
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=52.54 E-value=13 Score=29.87 Aligned_cols=55 Identities=13% Similarity=0.109 Sum_probs=37.6
Q ss_pred ccccCCCCccceeecccc-----C--ceeEEecCCCCceEEecC--CCcEEEccCCCCeEEEecCcc
Q 024516 205 LRRYGKEGTVFAGYHYDL-----N--FLTIHGRSRFPGLNIWLR--NGKKVEVKVPVGCLLIQTGKQ 262 (266)
Q Consensus 205 ~~~Yp~~~~~~~~~HtD~-----~--~lTll~q~~~~GLqv~~~--~g~W~~V~p~~g~~vVn~Gd~ 262 (266)
+++|.++. +++.|.|- + ++|+-+ ....-+.+... .+..+.+...+|.++|.-|+.
T Consensus 109 vN~Y~~G~--~i~~H~D~~e~~~~~pI~svSL-G~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~ 172 (211)
T 3i3q_A 109 INRYAPGA--KLSLHQDKDEPDLRAPIVSVSL-GLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGES 172 (211)
T ss_dssp EEEECTTC--CEEEECCCCCSCTTSCEEEEEE-ESCEEEEECCSSTTSCCEEEEECTTCEEEECGGG
T ss_pred EEEEcCCC--CcccccCCCccccCCCEEEEEC-CCCeEEEEecccCCCceEEEECCCCCEEEECchH
Confidence 78898765 89999993 2 233323 22344555432 356889999999999999876
No 13
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=52.52 E-value=7.3 Score=31.25 Aligned_cols=49 Identities=18% Similarity=0.240 Sum_probs=32.6
Q ss_pred CCCeeeccccccCCCCCCchhHHHHHHHHHHHhhhccEEEEeCCCCC--HHHHHHHHHHHH
Q 024516 2 EVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCT--VEDNDRFLDMME 60 (266)
Q Consensus 2 ~iPvIDl~~l~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~--~~~~~~~~~~~~ 60 (266)
.||++++... ...++++.+.+++.+.-.+.+.|||+- .+.+.+++..+.
T Consensus 122 ~ip~~~y~~~----------g~~~la~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~~ 172 (215)
T 1e4c_P 122 SIPCAPYATF----------GTRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAH 172 (215)
T ss_dssp CBCEECCCCT----------TCHHHHHHHHHHTSSCSEEEETTTEEEEEESSHHHHHHHHH
T ss_pred CcceeeCCCC----------CcHHHHHHHHHHhccCCEEEEcCCCcEEEeCCHHHHHHHHH
Confidence 3667666532 224778889999988889999999963 234555554433
No 14
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=51.72 E-value=8.9 Score=31.25 Aligned_cols=49 Identities=16% Similarity=0.140 Sum_probs=32.7
Q ss_pred CCCeeeccccccCCCCCCchhHHHHHHHHHHHhhhccEEEEeCCCCCH--HHHHHHHHHHH
Q 024516 2 EVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTV--EDNDRFLDMME 60 (266)
Q Consensus 2 ~iPvIDl~~l~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~--~~~~~~~~~~~ 60 (266)
.||++++... ...++++++.+++.+.-.+.+.|||+-. +.+++++..+.
T Consensus 161 ~v~~~~y~~~----------g~~ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~~ 211 (238)
T 1pvt_A 161 GISVVEFEKP----------GSVELGLKTVEKSEGKDAVLWDKHGVVAFGKDVAEAYDRVE 211 (238)
T ss_dssp CCEEECCCST----------TCHHHHHHHHHHTSSCSEEEETTSCEEEEESSHHHHHHHHH
T ss_pred CceEecCCCC----------CcHHHHHHHHHHhccCCEEEEcCCCceEecCCHHHHHHHHH
Confidence 3677766432 2247788889999888899999999632 34555554433
No 15
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=51.20 E-value=10 Score=30.11 Aligned_cols=39 Identities=23% Similarity=0.164 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhhhccEEEEeCCCCC--H------HHHHHHHHHHHhh
Q 024516 24 SELCREVSGILRETGALLVKDPRCT--V------EDNDRFLDMMEKY 62 (266)
Q Consensus 24 ~~~~~~l~~A~~~~Gff~v~nhgi~--~------~~~~~~~~~~~~f 62 (266)
.++++.+.+++.+.-.+.+.|||+- . +.+.+++..+..+
T Consensus 130 ~ela~~i~~~l~~~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~l 176 (200)
T 2fk5_A 130 EEAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMTTL 176 (200)
T ss_dssp HHHHHHHHHHHHHCSEEEETTTEEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCCEEEECCCCcEEEeCCCCCcCcHHHHHHHHHHH
Confidence 4778888888888889999999852 2 5677776655443
No 16
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.46 E-value=6.3 Score=25.88 Aligned_cols=42 Identities=10% Similarity=0.184 Sum_probs=35.2
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHhhhh
Q 024516 151 FPEWKETMDSWGHKMISAIEVVAEMAAIGFGLPKDAFTSLMK 192 (266)
Q Consensus 151 ~~~fr~~~~~y~~~~~~~a~~ll~~la~~Lgl~~~~f~~~~~ 192 (266)
+.+-+..+++||..-.+-...-+..||..+||+.+.....+.
T Consensus 13 ~k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWFq 54 (71)
T 2da7_A 13 YKDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWFE 54 (71)
T ss_dssp STHHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence 456788999999999988888899999999999887665554
No 17
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=47.57 E-value=18 Score=29.94 Aligned_cols=36 Identities=6% Similarity=0.151 Sum_probs=27.3
Q ss_pred HHHHHHHHHhhhccEEEEeCCCCCHHHHHHHHHHHHhhc
Q 024516 25 ELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYF 63 (266)
Q Consensus 25 ~~~~~l~~A~~~~Gff~v~nhgi~~~~~~~~~~~~~~fF 63 (266)
+..++|.+++.++|++.+.+..++.+.. .+.++.|-
T Consensus 30 ~~~~~l~~~l~~~Gvv~frg~~~~~~~~---~~~~~~~G 65 (283)
T 1otj_A 30 NQFEQLYHAVLRHQVVFLRDQAITPQQQ---RALAQRFG 65 (283)
T ss_dssp HHHHHHHHHHHHHSEEEECSCCCCHHHH---HHHHHTTS
T ss_pred HHHHHHHHHHHHCCEEEECCCCCCHHHH---HHHHHHhC
Confidence 5588899999999999999988766543 34455553
No 18
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=43.17 E-value=10 Score=31.76 Aligned_cols=37 Identities=5% Similarity=0.044 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhhhccEEEEeCCCCC--HHHHHHHHHHHH
Q 024516 24 SELCREVSGILRETGALLVKDPRCT--VEDNDRFLDMME 60 (266)
Q Consensus 24 ~~~~~~l~~A~~~~Gff~v~nhgi~--~~~~~~~~~~~~ 60 (266)
.++++++.+++.+.-.+.+.|||+- .+.+++++..+.
T Consensus 191 ~ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~e 229 (274)
T 2v9l_A 191 DAIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLID 229 (274)
T ss_dssp HHHHHHHHHHHTTCSEEEETTTEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCEEEEcCCCceEecCCHHHHHHHHH
Confidence 4778889999999999999999963 244555555443
No 19
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=42.00 E-value=38 Score=29.02 Aligned_cols=42 Identities=12% Similarity=0.206 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhhhccEEEEeCCCCC----HHHHHHHHHHHHhhcC
Q 024516 23 VSELCREVSGILRETGALLVKDPRCT----VEDNDRFLDMMEKYFE 64 (266)
Q Consensus 23 ~~~~~~~l~~A~~~~Gff~v~nhgi~----~~~~~~~~~~~~~fF~ 64 (266)
.+++.+++.+.+..-||+.=.+|||+ .+-+..+.+++++|++
T Consensus 303 ~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 303 VDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 35566667777778888887889864 5889999999999975
No 20
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=40.34 E-value=14 Score=29.33 Aligned_cols=39 Identities=15% Similarity=0.224 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHHhhhcc---EEEEeCCCCC--HHHHHHHHHHHH
Q 024516 22 EVSELCREVSGILRETG---ALLVKDPRCT--VEDNDRFLDMME 60 (266)
Q Consensus 22 ~~~~~~~~l~~A~~~~G---ff~v~nhgi~--~~~~~~~~~~~~ 60 (266)
+..++++.+.+++.+.+ .+.+.|||+- .+.+++++..+.
T Consensus 148 g~~~La~~i~~~l~~~~~~~avll~nHG~~~~G~~~~eA~~~~~ 191 (208)
T 2irp_A 148 NIPLLAKEVENYFKTSEDKYGFLIRGHGLYTWGRSMEEALIHTE 191 (208)
T ss_dssp CHHHHHHHHHHHHHHCSCCSCEEETTTEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCceEEEEcCCCCeEecCCHHHHHHHHH
Confidence 34578888888888765 7999999953 244555555443
No 21
>1v7z_A Creatininase, creatinine amidohydrolase; Mn-activated creatininase, substrate complex; 1.60A {Pseudomonas SP} SCOP: c.125.1.1 PDB: 1j2u_A 1j2t_A 3a6d_A 3a6j_A 3a6k_A 3a6l_A 3a6g_A 3a6f_A 3a6e_A 3a6h_A 1q3k_A
Probab=40.28 E-value=48 Score=27.25 Aligned_cols=37 Identities=11% Similarity=0.050 Sum_probs=29.0
Q ss_pred hhHHHHHHHHHHHhhhcc---EEEEeCCCCCHHHHHHHHH
Q 024516 21 SEVSELCREVSGILRETG---ALLVKDPRCTVEDNDRFLD 57 (266)
Q Consensus 21 ~~~~~~~~~l~~A~~~~G---ff~v~nhgi~~~~~~~~~~ 57 (266)
+....+...|.+++..+| ++.|.+||=....++.+.+
T Consensus 93 ~tl~~~l~di~~sl~~~GfrrivivNgHGGN~~~l~~a~~ 132 (260)
T 1v7z_A 93 ATLTGTVQDIIRELARHGARRLVLMNGHYENSMFIVEGID 132 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEECSGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEEcCCCCcHHHHHHHHH
Confidence 566788888999999999 6778889866666666655
No 22
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=39.85 E-value=40 Score=24.28 Aligned_cols=36 Identities=22% Similarity=0.329 Sum_probs=25.9
Q ss_pred eeeccccccCCCCCCchhHHHHHHHHHHHhhhccEEEEeCCCCCHH
Q 024516 5 VIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVE 50 (266)
Q Consensus 5 vIDl~~l~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~ 50 (266)
|||++.+... . + ..+|.+.|+++|+..|--.|...+
T Consensus 51 VlDl~~l~~~-~-----d----l~~L~~~l~~~gl~~vGV~g~~~~ 86 (120)
T 3ghf_A 51 VINVSGLESP-V-----N----WPELHKIVTSTGLRIIGVSGCKDA 86 (120)
T ss_dssp EEEEEECCSS-C-----C----HHHHHHHHHTTTCEEEEEESCCCH
T ss_pred EEEccccCCh-H-----H----HHHHHHHHHHcCCEEEEEeCCCcH
Confidence 5799887521 1 1 567889999999999877766544
No 23
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=39.46 E-value=29 Score=29.06 Aligned_cols=37 Identities=5% Similarity=0.002 Sum_probs=28.1
Q ss_pred HHHHHHHHHhhhccEEEEeCCC-CCHHHHHHHHHHHHhhcC
Q 024516 25 ELCREVSGILRETGALLVKDPR-CTVEDNDRFLDMMEKYFE 64 (266)
Q Consensus 25 ~~~~~l~~A~~~~Gff~v~nhg-i~~~~~~~~~~~~~~fF~ 64 (266)
+..++|.+++.++|++.+.+.. ++. +...+.++.|-.
T Consensus 40 ~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 40 ATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp HHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 5588899999999999999987 775 344455556543
No 24
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=37.04 E-value=1e+02 Score=24.55 Aligned_cols=50 Identities=14% Similarity=0.045 Sum_probs=29.7
Q ss_pred ccccCCCCccceeeccccC-----------ceeEEec-CC--C-CceEEecCCCcEEEccCCCCeEEEec
Q 024516 205 LRRYGKEGTVFAGYHYDLN-----------FLTIHGR-SR--F-PGLNIWLRNGKKVEVKVPVGCLLIQT 259 (266)
Q Consensus 205 ~~~Yp~~~~~~~~~HtD~~-----------~lTll~q-~~--~-~GLqv~~~~g~W~~V~p~~g~~vVn~ 259 (266)
+.+|.+++. -.+|.|+. .+|+++- ++ . |++.+ ++.. +.|.|..|..|+.-
T Consensus 115 v~~Y~~G~~--y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~F--p~~~-~~V~P~~G~al~f~ 179 (216)
T 3itq_A 115 ILNYEVDQQ--YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFF--PKLN-LSVHPRKGMAVYFE 179 (216)
T ss_dssp EEEECBTCC--EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEE--TTTT-EEECCCTTCEEEEE
T ss_pred EEEeCCCCc--cccccCCCcCCCcccCCceEEEEEEecccCCcCceeEe--cCCC-CEEecCCCeEEEEe
Confidence 677876554 36788863 3677542 22 2 33433 3321 78889998877754
No 25
>2nys_A AGR_C_3712P; SSPB, stringent starvation protein B, NESG, ATR88, structural genomics, PSI-2, protein structure initiative; 2.70A {Agrobacterium tumefaciens str} SCOP: b.136.1.2
Probab=36.80 E-value=26 Score=27.10 Aligned_cols=67 Identities=19% Similarity=0.248 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHhhcCCChh--hHHhhhhCCCCCCcccCCCccccCCCCccceeeccccCceeEEecCCCCceEEe
Q 024516 162 GHKMISAIEVVAEMAAIGFGLPKD--AFTSLMKQGPHLLAPTGCDLRRYGKEGTVFAGYHYDLNFLTIHGRSRFPGLNIW 239 (266)
Q Consensus 162 ~~~~~~~a~~ll~~la~~Lgl~~~--~f~~~~~~~~~~lr~~~~~~~~Yp~~~~~~~~~HtD~~~lTll~q~~~~GLqv~ 239 (266)
.++|+.+-+++|..++..=+|+-+ +|-.+....+.+--|.+. ..+|| .-+||++|.....|.|.
T Consensus 13 ~~AlrgVvr~vL~~va~~g~LPg~HHFyITF~T~~pGV~i~~~L-~~~YP-------------~EMTIVLQhQF~dL~V~ 78 (176)
T 2nys_A 13 QDALRGVIRKVLGEVAATGRLPGDHHFFITFLTGAPGVRISQHL-KSKYA-------------EQMTIVIQHQFWDMKVT 78 (176)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCTTCCEEEEEESSSTTCBCCHHH-HHHSS-------------SEEEEEESSSCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCccEEEEEEecCCCCccCCHHH-HhhCC-------------CceEEEEEeeecCcEEe
Confidence 457788899999999986557743 222222222222112222 25576 55788888888889884
Q ss_pred cCCC
Q 024516 240 LRNG 243 (266)
Q Consensus 240 ~~~g 243 (266)
.+|
T Consensus 79 -e~~ 81 (176)
T 2nys_A 79 -ETG 81 (176)
T ss_dssp -SSE
T ss_pred -cCc
Confidence 443
No 26
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=36.12 E-value=35 Score=27.72 Aligned_cols=56 Identities=18% Similarity=0.233 Sum_probs=35.8
Q ss_pred ccccCCCCccceeeccccC--------ceeEEecCCCCceEEecCC----------CcEEEccCCCCeEEEecCcc
Q 024516 205 LRRYGKEGTVFAGYHYDLN--------FLTIHGRSRFPGLNIWLRN----------GKKVEVKVPVGCLLIQTGKQ 262 (266)
Q Consensus 205 ~~~Yp~~~~~~~~~HtD~~--------~lTll~q~~~~GLqv~~~~----------g~W~~V~p~~g~~vVn~Gd~ 262 (266)
+++|++.. -+++.|.|-. +.||-+ ....=+.+.... +..+.|...+|.++|+-|+.
T Consensus 130 vN~Y~~G~-d~i~~H~D~~~~~~~~~~IaslSL-G~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~G~~ 203 (238)
T 2iuw_A 130 CNLYRNEK-DSVDWHSDDEPSLGRCPIIASLSF-GATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIMEGAT 203 (238)
T ss_dssp EEEECSTT-CCEEEECCCCGGGCSSCCEEEEEE-ESCEEEEEEECCC--------CCCEEEEEECTTCEEEEEETH
T ss_pred EEEECCCC-CceeCCcCChhhcCCCCcEEEEEC-CCCEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEChhh
Confidence 78897543 4689999942 223322 222334443222 36899999999999999874
No 27
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=35.76 E-value=66 Score=25.50 Aligned_cols=25 Identities=8% Similarity=0.054 Sum_probs=18.1
Q ss_pred ccEEEEeCCCCCHHHHHHHHHHHHh
Q 024516 37 TGALLVKDPRCTVEDNDRFLDMMEK 61 (266)
Q Consensus 37 ~Gff~v~nhgi~~~~~~~~~~~~~~ 61 (266)
.-++++...-++.+.++.+.+.++.
T Consensus 19 ~P~i~~~~~fLs~~Ec~~li~~~~~ 43 (224)
T 2jig_A 19 SPRAFLLKNFLSDEECDYIVEKARP 43 (224)
T ss_dssp TTTEEEETTCSCHHHHHHHHHHHGG
T ss_pred CCCEEEEcccCCHHHHHHHHHHhhc
Confidence 3455555556888999999988765
No 28
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=35.07 E-value=45 Score=17.82 Aligned_cols=19 Identities=21% Similarity=0.226 Sum_probs=16.3
Q ss_pred HHHHHHHHHHhhhccEEEE
Q 024516 24 SELCREVSGILRETGALLV 42 (266)
Q Consensus 24 ~~~~~~l~~A~~~~Gff~v 42 (266)
..+++.+.-.|.+-||||.
T Consensus 9 s~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHHhccCccccC
Confidence 4778889999999999984
No 29
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=34.10 E-value=50 Score=27.35 Aligned_cols=37 Identities=14% Similarity=0.186 Sum_probs=28.6
Q ss_pred HHHHHHHHHhhhccEEEEeCCCCCHHHHHHHHHHHHhhcC
Q 024516 25 ELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFE 64 (266)
Q Consensus 25 ~~~~~l~~A~~~~Gff~v~nhgi~~~~~~~~~~~~~~fF~ 64 (266)
+..++|.+++.++|.+.+.+..++.+. ..+.++.|=.
T Consensus 28 ~~~~~l~~~l~~~gvv~fR~q~l~~~~---~~~fa~~fG~ 64 (277)
T 3pvj_A 28 EERDAIEQALLQHQVLFLRDQPINPEQ---QARFAARFGD 64 (277)
T ss_dssp HHHHHHHHHHHHHSEEEESSCCCCHHH---HHHHHGGGSC
T ss_pred HHHHHHHHHHHHCCEEEECCCCCCHHH---HHHHHHHhCC
Confidence 668889999999999999999887643 3445666644
No 30
>2qas_A SSPB, hypothetical protein; SSPB, adaptor, CLPX, unknown function, hydrolase activator; 2.55A {Caulobacter vibrioides} PDB: 2qaz_A
Probab=31.11 E-value=25 Score=26.68 Aligned_cols=67 Identities=16% Similarity=0.208 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHhhcCCChh--hHHhhhhCCCCCCcccCCCccccCCCCccceeeccccCceeEEecCCCCceEEe
Q 024516 162 GHKMISAIEVVAEMAAIGFGLPKD--AFTSLMKQGPHLLAPTGCDLRRYGKEGTVFAGYHYDLNFLTIHGRSRFPGLNIW 239 (266)
Q Consensus 162 ~~~~~~~a~~ll~~la~~Lgl~~~--~f~~~~~~~~~~lr~~~~~~~~Yp~~~~~~~~~HtD~~~lTll~q~~~~GLqv~ 239 (266)
.+.|+.+-+++|..++..=+|+-+ +|-.+....+.+--|.+. ..+|| .-+||++|.....|.|.
T Consensus 21 ~~AlrgVvr~vL~~va~~g~LPg~HHFyITF~T~~pGV~i~d~L-~~~YP-------------~EMTIVLQhQF~dL~V~ 86 (157)
T 2qas_A 21 QDALRGVVKAALKKAAAPGGLPEPHHLYITFKTKAAGVSGPQDL-LSKYP-------------DEMTIVLQHQYWDLAPG 86 (157)
T ss_dssp HHHHHHHHHHHHHHHSSTTCSCTTCCEEEEEETTSTTCBCCHHH-HHHSS-------------SEEEEEESSSCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCccEEEEEEecCCCCccCCHHH-HhhCC-------------CceEEEEEeeecCcEEe
Confidence 457788888999888885557643 222222222222112221 25566 45788888888899984
Q ss_pred cCCC
Q 024516 240 LRNG 243 (266)
Q Consensus 240 ~~~g 243 (266)
.+|
T Consensus 87 -e~~ 89 (157)
T 2qas_A 87 -ETF 89 (157)
T ss_dssp -SSE
T ss_pred -cCc
Confidence 443
No 31
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=29.13 E-value=89 Score=24.59 Aligned_cols=56 Identities=14% Similarity=0.132 Sum_probs=35.5
Q ss_pred ccccCCCCccceeeccccC--------ceeEEecCCCCceEEecC---------CCcEEEccCCCCeEEEecCcc
Q 024516 205 LRRYGKEGTVFAGYHYDLN--------FLTIHGRSRFPGLNIWLR---------NGKKVEVKVPVGCLLIQTGKQ 262 (266)
Q Consensus 205 ~~~Yp~~~~~~~~~HtD~~--------~lTll~q~~~~GLqv~~~---------~g~W~~V~p~~g~~vVn~Gd~ 262 (266)
+++|.++. -+++.|.|-. ..++-+ ....-+.+..+ .+..+.+...+|.++|+-|++
T Consensus 104 vN~Y~~G~-d~i~~H~D~~~~~~~~~~IasvSL-G~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g~~ 176 (204)
T 3s57_A 104 INRYKDGS-DHICEHRDDERELAPGSPIASVSF-GASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPT 176 (204)
T ss_dssp EEEESSTT-CCEEEECCCCTTBCTTCCEEEEEE-ESCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEETTH
T ss_pred EEEECCCC-CcccceecChhhccCCCcEEEEEC-CCceEEEEEEcCCCccccccCCceEEEECCCCCEEEECchh
Confidence 78887643 4689999962 123322 22334444322 124788999999999999874
No 32
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=28.32 E-value=47 Score=27.08 Aligned_cols=41 Identities=7% Similarity=0.142 Sum_probs=35.1
Q ss_pred HHHHHHHHHHhhhccEEEEeCCCCCHHHHHHHHHHHHhhcC
Q 024516 24 SELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFE 64 (266)
Q Consensus 24 ~~~~~~l~~A~~~~Gff~v~nhgi~~~~~~~~~~~~~~fF~ 64 (266)
.+..++|.++|++.++|+-.|..+..-++.++.+.+.++|.
T Consensus 88 ~e~~~~l~~aa~~~~v~~a~N~S~Gv~l~~~~~~~aa~~l~ 128 (243)
T 3qy9_A 88 EKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLLD 128 (243)
T ss_dssp HHHHHHHHHHTTTSEEEECSSCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCEEEECCccHHHHHHHHHHHHHHHhcC
Confidence 34578899999999999999999888899999888888874
No 33
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=27.88 E-value=62 Score=27.22 Aligned_cols=37 Identities=5% Similarity=0.040 Sum_probs=28.3
Q ss_pred HHHHHHHHHhhhccEEEEeCC-CCCHHHHHHHHHHHHhhcC
Q 024516 25 ELCREVSGILRETGALLVKDP-RCTVEDNDRFLDMMEKYFE 64 (266)
Q Consensus 25 ~~~~~l~~A~~~~Gff~v~nh-gi~~~~~~~~~~~~~~fF~ 64 (266)
+..++|.+++.++|.+.+.+. .++.+. ..+.++.|=.
T Consensus 34 ~~~~~l~~al~~~gvv~fR~q~~l~~~~---~~~fa~~fG~ 71 (301)
T 3r1j_A 34 ATVEQIRRALLTHKVIFFRHQHHLDDSR---QLEFARLLGT 71 (301)
T ss_dssp HHHHHHHHHHHHHSEEEECCCTTCCHHH---HHHHHHHHSC
T ss_pred HHHHHHHHHHHHCCEEEECCCCCCCHHH---HHHHHHhcCC
Confidence 668889999999999999998 777653 3445556543
No 34
>3no4_A Creatininase, creatinine amidohydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.00A {Nostoc punctiforme pcc 73102}
Probab=27.19 E-value=1e+02 Score=25.51 Aligned_cols=40 Identities=10% Similarity=0.131 Sum_probs=29.7
Q ss_pred hhHHHHHHHHHHHhhhccE---EEEeCCCCCHHHHHHHHHHHH
Q 024516 21 SEVSELCREVSGILRETGA---LLVKDPRCTVEDNDRFLDMME 60 (266)
Q Consensus 21 ~~~~~~~~~l~~A~~~~Gf---f~v~nhgi~~~~~~~~~~~~~ 60 (266)
+....+...+.+++...|| +.|.+||=....++.+.+..+
T Consensus 102 ~t~~~~l~di~~sl~~~G~~~iv~vNgHGGN~~~l~~a~~el~ 144 (267)
T 3no4_A 102 STLIQVVRDYVTCLAKAGFSKFYFINGHGGNIATLKAAFSETY 144 (267)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEECCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEEECCcCcHHHHHHHHHHHH
Confidence 5667788888899999986 677789876666766666543
No 35
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=27.07 E-value=38 Score=28.22 Aligned_cols=37 Identities=3% Similarity=0.048 Sum_probs=26.3
Q ss_pred HHHHHHHHHHhhhccEEEEeCCCCC--HHHHHHHHHHHH
Q 024516 24 SELCREVSGILRETGALLVKDPRCT--VEDNDRFLDMME 60 (266)
Q Consensus 24 ~~~~~~l~~A~~~~Gff~v~nhgi~--~~~~~~~~~~~~ 60 (266)
.++++++.+++.+.-.+.+.|||+- .+.+.+++..+.
T Consensus 169 ~el~~~i~~~l~~~~avlL~nHG~~~~G~tl~eA~~~~~ 207 (273)
T 3ocr_A 169 LSERERLVADLGDKSVMILRNHGLLTGGVSVEHAIQQLH 207 (273)
T ss_dssp HHHHHHHHHHHTTCSEEEETTTEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCCEEEEcCCceEEecCCHHHHHHHHH
Confidence 4667888888989999999999953 244555555433
No 36
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=27.02 E-value=56 Score=19.54 Aligned_cols=24 Identities=13% Similarity=0.217 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHhhcCCChhhH
Q 024516 164 KMISAIEVVAEMAAIGFGLPKDAF 187 (266)
Q Consensus 164 ~~~~~a~~ll~~la~~Lgl~~~~f 187 (266)
+-.+++..|.+++++.||.+++++
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~v 41 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQAI 41 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcccE
Confidence 346788999999999999998643
No 37
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=26.47 E-value=52 Score=27.32 Aligned_cols=37 Identities=11% Similarity=0.147 Sum_probs=24.7
Q ss_pred HHHHHHHhhhccEEEEeCCCCCHHHHHHHHHHHHhhc
Q 024516 27 CREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYF 63 (266)
Q Consensus 27 ~~~l~~A~~~~Gff~v~nhgi~~~~~~~~~~~~~~fF 63 (266)
.++|.++|++.+.|+..|..+..-++.++.+.+.++|
T Consensus 112 ~~~L~~aa~~~~vv~a~N~s~Gv~l~~~~~~~aa~~l 148 (272)
T 4f3y_A 112 KAQLRAAGEKIALVFSANMSVGVNVTMKLLEFAAKQF 148 (272)
T ss_dssp HHHHHHHTTTSEEEECSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhccCCEEEECCCCHHHHHHHHHHHHHHHhc
Confidence 4566677777777777776666666666666666665
No 38
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=25.49 E-value=57 Score=27.41 Aligned_cols=37 Identities=8% Similarity=-0.001 Sum_probs=22.1
Q ss_pred HHHHHHHhhhccEEEEeCCCCCHHHHHHHHHHHHhhc
Q 024516 27 CREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYF 63 (266)
Q Consensus 27 ~~~l~~A~~~~Gff~v~nhgi~~~~~~~~~~~~~~fF 63 (266)
.++|.++|++.++|+..|..+..-++.++.+.+.++|
T Consensus 127 ~~~L~~aa~~~~~~~a~N~SiGv~ll~~l~~~aa~~l 163 (288)
T 3ijp_A 127 EAQIADFAKYTTIVKSGNMSLGVNLLANLVKRAAKAL 163 (288)
T ss_dssp HHHHHHHHTTSEEEECSCCCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHhCcCCEEEECCCcHHHHHHHHHHHHHHHhc
Confidence 4456666666666666666555556666665555554
No 39
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=24.78 E-value=1.7e+02 Score=22.35 Aligned_cols=41 Identities=22% Similarity=0.310 Sum_probs=32.6
Q ss_pred hhHHHHHHHHHHHhhhccEEEEeCC-CCCHHHHHHHHHHHHh
Q 024516 21 SEVSELCREVSGILRETGALLVKDP-RCTVEDNDRFLDMMEK 61 (266)
Q Consensus 21 ~~~~~~~~~l~~A~~~~Gff~v~nh-gi~~~~~~~~~~~~~~ 61 (266)
+.....+++|.+.+.+...++|.++ |++...+.++....+.
T Consensus 6 ~~K~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~ 47 (180)
T 1zav_A 6 QQKELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLRE 47 (180)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 3567889999999999988888864 8998877777776654
No 40
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=24.10 E-value=72 Score=19.27 Aligned_cols=23 Identities=22% Similarity=0.260 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHhhcCCChhhH
Q 024516 165 MISAIEVVAEMAAIGFGLPKDAF 187 (266)
Q Consensus 165 ~~~~a~~ll~~la~~Lgl~~~~f 187 (266)
-.+++..|.+.+++.||.+++++
T Consensus 17 k~~l~~~lt~~l~~~lg~~~~~v 39 (64)
T 3abf_A 17 KRELVRRLTEMASRLLGEPYEEV 39 (64)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHHHHHHHHHhCCCcccE
Confidence 36788999999999999988643
No 41
>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=24.07 E-value=35 Score=27.37 Aligned_cols=34 Identities=12% Similarity=0.232 Sum_probs=23.9
Q ss_pred HHHHHHHHHhhhc-cEEEEeCCCCC--HHHHHHHHHH
Q 024516 25 ELCREVSGILRET-GALLVKDPRCT--VEDNDRFLDM 58 (266)
Q Consensus 25 ~~~~~l~~A~~~~-Gff~v~nhgi~--~~~~~~~~~~ 58 (266)
++++++.+++.+. -.+.+.|||+- .+.+++++..
T Consensus 167 ela~~i~~~l~~~~~avlL~nHG~~~~G~t~~eA~~~ 203 (222)
T 3m4r_A 167 TLAKEVMNCFKKGIDGIVLRKHGLLTFGDTGKEAYDR 203 (222)
T ss_dssp HHHHHHHHHCCTTCSEEEETTTEEEEEESSHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCEEECCCHHHHHHH
Confidence 6788999999854 67889999953 2344444443
No 42
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=23.87 E-value=93 Score=25.37 Aligned_cols=37 Identities=11% Similarity=0.144 Sum_probs=30.6
Q ss_pred HHHHHHHhhhccEEEEeCCCCCHHHHHHHHHHHHhhcC
Q 024516 27 CREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFE 64 (266)
Q Consensus 27 ~~~l~~A~~~~Gff~v~nhgi~~~~~~~~~~~~~~fF~ 64 (266)
.+++.+.+.+.||+.|.|- ++.+.++++.+...++++
T Consensus 21 ~~~~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~ 57 (288)
T 2rdq_A 21 RAALDSFYEEHGYLFLRNV-LDRDLVKTVAEQMREGLV 57 (288)
T ss_dssp HHHHHHHHHHHSEEEECSC-SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEEeCC-CCHHHHHHHHHHHHHHHH
Confidence 3457788899999999986 789999999998887753
No 43
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=22.24 E-value=50 Score=27.38 Aligned_cols=37 Identities=8% Similarity=0.131 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhhhccEEEEeCCCCC--HHHHHHHHHHHH
Q 024516 24 SELCREVSGILRETGALLVKDPRCT--VEDNDRFLDMME 60 (266)
Q Consensus 24 ~~~~~~l~~A~~~~Gff~v~nhgi~--~~~~~~~~~~~~ 60 (266)
.+++++|.+++.+.-.+.+.|||+- .+.+++++..+.
T Consensus 178 ~ela~~ia~~l~~~~avLL~nHG~~~~G~tl~eA~~~~~ 216 (270)
T 2z7b_A 178 PDVCADIAESLGSQTVVLMARHGVVNVGKSVREVVFRAF 216 (270)
T ss_dssp HHHHHHHHHHHTTSSEEEETTTEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCEEEEcCCceEEEeCCHHHHHHHHH
Confidence 4778888899988889999999963 234555555443
No 44
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=21.95 E-value=1.7e+02 Score=22.19 Aligned_cols=40 Identities=8% Similarity=0.156 Sum_probs=30.3
Q ss_pred hhHHHHHHHHHHHhhhcc-EEEEeC-CCCCHHHHHHHHHHHH
Q 024516 21 SEVSELCREVSGILRETG-ALLVKD-PRCTVEDNDRFLDMME 60 (266)
Q Consensus 21 ~~~~~~~~~l~~A~~~~G-ff~v~n-hgi~~~~~~~~~~~~~ 60 (266)
+...+.+++|.+.+.+.. .++|.+ +|++...+.++....+
T Consensus 4 ~~K~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr 45 (173)
T 2j01_J 4 KRNVELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALK 45 (173)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHH
Confidence 356788899999999888 666655 5899877777776655
No 45
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=21.94 E-value=1.8e+02 Score=21.39 Aligned_cols=27 Identities=15% Similarity=0.266 Sum_probs=19.6
Q ss_pred CCceEEecCCCcEEEcc-CCCCeEEEecCc
Q 024516 233 FPGLNIWLRNGKKVEVK-VPVGCLLIQTGK 261 (266)
Q Consensus 233 ~~GLqv~~~~g~W~~V~-p~~g~~vVn~Gd 261 (266)
..||.| +.|.|..+. ..+|++++++-+
T Consensus 86 ~~gL~I--ppgvWh~~~~~s~~avllvlas 113 (141)
T 2pa7_A 86 AVGLYV--GPAVWHEMHDFSSDCVMMVLAS 113 (141)
T ss_dssp TEEEEE--CTTCEEEEECCCTTCEEEEEES
T ss_pred CcEEEe--CCCEEEEEEEcCCCeEEEEECC
Confidence 357776 678899985 457888887654
No 46
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=21.37 E-value=85 Score=25.70 Aligned_cols=35 Identities=9% Similarity=0.104 Sum_probs=29.7
Q ss_pred HHHHHhhhccEEEEeCCCCCHHHHHHHHHHHHhhcC
Q 024516 29 EVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFE 64 (266)
Q Consensus 29 ~l~~A~~~~Gff~v~nhgi~~~~~~~~~~~~~~fF~ 64 (266)
+..+.+.+.||+.|.|- ++.+.++++.+...++++
T Consensus 7 e~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~ 41 (291)
T 2opw_A 7 SQLQKFQQDGFLVLEGF-LSAEECVAMQQRIGEIVA 41 (291)
T ss_dssp HHHHHHHHHSEEEETTS-SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEecCC-CCHHHHHHHHHHHHHHHh
Confidence 45678889999999986 789999999999888875
No 47
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=20.79 E-value=1.2e+02 Score=25.12 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=26.1
Q ss_pred HHHHHHHHhhhccEEEEeCCC-C-CHHHHHHHHHHHHhhcC
Q 024516 26 LCREVSGILRETGALLVKDPR-C-TVEDNDRFLDMMEKYFE 64 (266)
Q Consensus 26 ~~~~l~~A~~~~Gff~v~nhg-i-~~~~~~~~~~~~~~fF~ 64 (266)
..++|++++.++|++.+.+.. + +.+ ...+.++.|-.
T Consensus 44 ~~~~L~~~l~~~gvv~fRgq~~l~~~~---~~~~~a~~fG~ 81 (293)
T 3eat_X 44 PAQWLKGLARSHHLLLLRGFAAFADAE---SLTRYCHDFGE 81 (293)
T ss_dssp CHHHHHHHHHHHSEEEECSCBCCSSHH---HHHHHHHHHSC
T ss_pred HHHHHHHHHHHhCEEEECCCCCCCCHH---HHHHHHHHhCC
Confidence 477899999999999999986 4 443 34455566643
No 48
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=20.51 E-value=90 Score=18.57 Aligned_cols=22 Identities=18% Similarity=0.194 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHhhcCCChh
Q 024516 164 KMISAIEVVAEMAAIGFGLPKD 185 (266)
Q Consensus 164 ~~~~~a~~ll~~la~~Lgl~~~ 185 (266)
+-.+++..|.+++++.||++++
T Consensus 15 qk~~l~~~i~~~l~~~lg~~~~ 36 (61)
T 2opa_A 15 QKRNLVEKVTEAVKETTGASEE 36 (61)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGG
T ss_pred HHHHHHHHHHHHHHHHhCcCcC
Confidence 3467889999999999999875
Done!