Citrus Sinensis ID: 024517

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260------
Protein Sequence
MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRMRSYM
Secondary Structure (PSIPRED)
ccccccEEEEEccccHHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHHHcccccEEEEEEEcccccHHHHHHHHHHHHHHcccccEEEEcccccccccccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccEEEEccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHcccEEEEEEEccccHHHHHHHHHHHHHHHcccEEEEEcccccccccccEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEEcccccccHHHHHHHHHcHHHHHHHHHHHHHHcccEEEEEccccEEcccHHHccccHHHHHHHHHccccccccccHHHHHHHHHHHHcHHHcHcccEEEEEcccHHHccHHHHHHc
Coil and Loop (DISEMBL)
MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMgslkggqpvevvgldmeedregaFDEAVDKACQILGNLDAFVHCytyegkmqdplqvgEDEFKKLVKINFVAPWFLLKAVGRRmkeskaggSIVFLTSIIgaerglypgaaayGACAASIHQLVRTAAMEIGKHKIRVNgiarglhlqdeypiavGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIsdgsrymtgttiyvdgaqsitrprmrsym
Flexible Loop (DISEMBL)
menqakrvlltsdgdeiSKNIAFHlakrgcrlvlVGNERRLSSVAEkmmgslkggqpvEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPlhrwldvkndLASTVIYLisdgsrymtgttiyvdgaqsitrprmrsym
Low Complexity Region (SEG)
MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPgaaaygacaaSIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRMRSYM
Disordered region (IsUnstruct)
****************ISKNIAFHLAKRGCRLVLVGNERR*******************VVG********GAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA************
Disordered Region (DISOPRED)
MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRMRSYM
Disordered Region (DISEMBL)
MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT********
Disordered Region (DISPRO)
**NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRMRSYM
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRMRSYM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	266	2.2.26 [Sep-21-2011]
P51831	246	3-oxoacyl-[acyl-carrier-p	yes	no	0.860	0.930	0.295	3e-16
P33368	253	Uncharacterized oxidoredu	N/A	no	0.906	0.952	0.268	2e-15
Q29529	244	Carbonyl reductase [NADPH	yes	no	0.883	0.963	0.264	1e-14
P42556	289	Pteridine reductase 1 OS=	N/A	no	0.507	0.467	0.331	4e-14
Q8CPI3	244	3-oxoacyl-[acyl-carrier-p	no	no	0.879	0.959	0.285	8e-14
Q5HPW0	244	3-oxoacyl-[acyl-carrier-p	yes	no	0.879	0.959	0.285	8e-14
Q9LBG2	267	Levodione reductase OS=Le	N/A	no	0.894	0.891	0.261	2e-13
Q99LB2	279	Dehydrogenase/reductase S	yes	no	0.883	0.842	0.280	2e-12
Q8VID1	279	Dehydrogenase/reductase S	no	no	0.883	0.842	0.272	2e-12
Q5RCF8	278	Dehydrogenase/reductase S	yes	no	0.887	0.848	0.285	2e-12

>sp|P51831|FABG_BACSU 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Bacillus subtilis (strain 168) GN=fabG PE=3 SV=3

 Score = 85.5 bits (210), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 130/257 (50%), Gaps = 28/257 (10%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVL--VGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
           K  ++T     I ++IA  LAK G  +V+   GNE + + V +++      G+    V  
Sbjct: 5   KTAIVTGASRGIGRSIALDLAKSGANVVVNYSGNEAKANEVVDEIKSM---GRKAIAVKA 61

Query: 64  DME--EDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINF 119
           D+   ED +    E +     +   +D  V+     G  +D L  ++ EDE+  ++ IN 
Sbjct: 62  DVSNPEDVQNMIKETL----SVFSTIDILVN---NAGITRDNLIMRMKEDEWDDVININL 114

Query: 120 VAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME 179
              +   KAV R+M + ++G  I+ ++SI+G      PG A Y A  A +  L +++A E
Sbjct: 115 KGVFNCTKAVTRQMMKQRSG-RIINVSSIVGVSGN--PGQANYVAAKAGVIGLTKSSAKE 171

Query: 180 IGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL 236
           +    I VN IA G     + D+    V Q+  +K +    PL R+ +  +D++S V +L
Sbjct: 172 LASRNITVNAIAPGFISTDMTDKLAKDV-QDEMLKQI----PLARFGE-PSDVSSVVTFL 225

Query: 237 ISDGSRYMTGTTIYVDG 253
            S+G+RYMTG T+++DG
Sbjct: 226 ASEGARYMTGQTLHIDG 242

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.
Bacillus subtilis (strain 168) (taxid: 224308)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 0EC: 0

>sp|P33368|YOHF_ECOLI Uncharacterized oxidoreductase YohF OS=Escherichia coli (strain K12) GN=yohF PE=3 SV=2

 Score = 82.8 bits (203), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 128/268 (47%), Gaps = 27/268 (10%)

Query: 5   AKRVLLTSDGDEISKNIAFHLAKRGCRLVLV--GNERRLSSVAEKMMGSLKGGQPVEVVG 62
           A+  ++T+    I K  A  LA++G  + +    +E      A +++     G   E+V 
Sbjct: 2   AQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSH---GVRAEIVQ 58

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDP--LQVGEDEFKKLVKINFV 120
           LD+    EGA   A++K  Q LG +D  V+     G M     L +  DE++K+  ++  
Sbjct: 59  LDLGNLPEGAL--ALEKLIQRLGRIDVLVN---NAGAMTKAPFLDMAFDEWRKIFTVDVD 113

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
             +   +   R+M +   GG I+ +TS+   E    P A+AY A   ++  L +  A+E+
Sbjct: 114 GAFLCSQIAARQMVKQGQGGRIINITSV--HEHTPLPDASAYTAAKHALGGLTKAMALEL 171

Query: 181 GKHKIRVNGIARG-----LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY 235
            +HKI VN +A G     ++  D+  +    E ++ L R  A         +++AS V++
Sbjct: 172 VRHKILVNAVAPGAIATPMNGMDDSDVKPDAEPSIPLRRFGA--------THEIASLVVW 223

Query: 236 LISDGSRYMTGTTIYVDGAQSITRPRMR 263
           L S+G+ Y TG ++ VDG   +  P+  
Sbjct: 224 LCSEGANYTTGQSLIVDGGFMLANPQFN 251

Escherichia coli (strain K12) (taxid: 83333)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q29529|CBR2_PIG Carbonyl reductase [NADPH] 2 OS=Sus scrofa GN=CBR2 PE=1 SV=1

 Score = 80.5 bits (197), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 123/253 (48%), Gaps = 18/253 (7%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNER-RLSSVAEKMMGSLKGGQPVE 59
           M     R L+T  G  I ++    L   G R+V V      L S++++  G       +E
Sbjct: 3   MNFSGLRALVTGAGKGIGRDTVKALHVSGARVVAVTRTNGDLVSLSQECPG-------IE 55

Query: 60  VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINF 119
            V +D+ +       EA ++A   +G +D  V+       MQ  L   ++ F +   +N 
Sbjct: 56  PVCVDLGDW------EATERALGGVGPVDLLVNNAAV-ALMQPFLDTTKEVFDRSFNVNL 108

Query: 120 VAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME 179
            + + + + V R M E    GSIV ++S++      YPG AAY +   ++  L ++ AME
Sbjct: 109 RSVFQVSQIVARSMIERGVPGSIVNVSSMV--SHVTYPGLAAYSSTKGAMTMLTKSMAME 166

Query: 180 IGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD 239
           +G HKIRVN +   + L              + ++E  P+ ++ +V+ D+ +++++L+SD
Sbjct: 167 LGPHKIRVNSVNPTVVLTAMGRSVTSDPELARKLKERHPMRKFAEVE-DVVNSILFLLSD 225

Query: 240 GSRYMTGTTIYVD 252
            S   +G++I+VD
Sbjct: 226 RSASTSGSSIFVD 238

May function in the pulmonary metabolism of endogenous carbonyl compounds, such as aliphatic aldehydes and ketones derived from lipid peroxidation, 3-ketosteroids and fatty aldehydes, as well as in xenobiotic metabolism.

Sus scrofa (taxid: 9823)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|P42556|PTR1_LEITA Pteridine reductase 1 OS=Leishmania tarentolae GN=PTR1 PE=1 SV=1

 Score = 78.6 bits (192), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 83/148 (56%), Gaps = 13/148 (8%)

Query: 118 NFVAPWFLLKAVGRRMKESKA-----GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 172
           N +AP+FL+KA  +R+ +++A       SIV +   + ++  L  G   Y     ++  L
Sbjct: 148 NAIAPYFLIKAFAQRVADTRAEQRGTSYSIVNMVDAMTSQPLL--GYTMYTMAKEALEGL 205

Query: 173 VRTAAMEIGKHKIRVNGIARGLH-LQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAS 231
            R+AA+E+   +IRVNG++ GL  L D+ P +V ++      R   PL++      +++ 
Sbjct: 206 TRSAALELASLQIRVNGVSPGLSVLPDDMPFSVQED-----YRRKVPLYQRNSSAEEVSD 260

Query: 232 TVIYLISDGSRYMTGTTIYVDGAQSITR 259
            VI+L S  ++Y+TGT I VDG  S+TR
Sbjct: 261 VVIFLCSPKAKYITGTCIKVDGGYSLTR 288

Exhibits a NADPH-dependent biopterin reductase activity. Has good activity with folate and significant activity with dihydrofolate and dihydrobiopterin, but not with quinonoid dihydrobiopterin. Confers resistance to methotrexate (MTX).

Leishmania tarentolae (taxid: 5689)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: 3

>sp|Q8CPI3|FABG_STAES 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1

 Score = 77.8 bits (190), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 126/252 (50%), Gaps = 18/252 (7%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVL--VGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
           K  L+T     I ++IA  LA+ G  + +   G++ +  +V E++    KG   VE   +
Sbjct: 3   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEI--KAKG---VESFAI 57

Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVA 121
                +     E + +     G++D  V+     G  +D L  ++ E E+  ++  N   
Sbjct: 58  QANVAKGDEVKEMIKEVVSQFGSVDVLVNN---AGITKDNLLMRMKEQEWDDVIDTNLKG 114

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
            +  ++ V  +M   ++G +I+ LTSI+GA     PG A Y A  A +  L +TAA E+ 
Sbjct: 115 VFNCIQKVTPQMLRQRSG-AIINLTSIVGAMGN--PGQANYVATKAGVIGLTKTAARELA 171

Query: 182 KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 241
              I VN +A G  + D    A+  +   +++ E  PL R+ +   D+A+TV +L SD +
Sbjct: 172 SRGITVNAVAPGFIVSD-MTNALSDDLKDQML-EQIPLKRFGE-DTDIANTVAFLASDKA 228

Query: 242 RYMTGTTIYVDG 253
           +Y+TG TI+V+G
Sbjct: 229 KYITGQTIHVNG 240

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.

Staphylococcus epidermidis (strain ATCC 12228) (taxid: 176280)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|Q5HPW0|FABG_STAEQ 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1

 Score = 77.8 bits (190), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 126/252 (50%), Gaps = 18/252 (7%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVL--VGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
           K  L+T     I ++IA  LA+ G  + +   G++ +  +V E++    KG   VE   +
Sbjct: 3   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEI--KAKG---VESFAI 57

Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVA 121
                +     E + +     G++D  V+     G  +D L  ++ E E+  ++  N   
Sbjct: 58  QANVAKGDEVKEMIKEVVSQFGSVDVLVNN---AGITKDNLLMRMKEQEWDDVIDTNLKG 114

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
            +  ++ V  +M   ++G +I+ LTSI+GA     PG A Y A  A +  L +TAA E+ 
Sbjct: 115 VFNCIQKVTPQMLRQRSG-AIINLTSIVGAMGN--PGQANYVATKAGVIGLTKTAARELA 171

Query: 182 KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 241
              I VN +A G  + D    A+  +   +++ E  PL R+ +   D+A+TV +L SD +
Sbjct: 172 SRGITVNAVAPGFIVSD-MTNALSDDLKDQML-EQIPLKRFGE-DTDIANTVAFLASDKA 228

Query: 242 RYMTGTTIYVDG 253
           +Y+TG TI+V+G
Sbjct: 229 KYITGQTIHVNG 240

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.

Staphylococcus epidermidis (strain ATCC 35984 / RP62A) (taxid: 176279)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|Q9LBG2|LVR_LEIAQ Levodione reductase OS=Leifsonia aquatica GN=lvr PE=1 SV=1

 Score = 76.6 bits (187), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 112/260 (43%), Gaps = 22/260 (8%)

Query: 8   VLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEE 67
           VL+T  G  + +  A  LA  G +L LV  +     +       L+     EV+    + 
Sbjct: 16  VLITGGGSGLGRATAVRLAAEGAKLSLV--DVSSEGLEASKAAVLETAPDAEVLTTVADV 73

Query: 68  DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLK 127
             E   +  V    +  G +D F +    EGK          EF K+V IN    +  L+
Sbjct: 74  SDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLE 133

Query: 128 AVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRV 187
            V + M+E  +G  +V  T+ +G  RG+    + Y A    +  L R +A+E G++ IR+
Sbjct: 134 KVLKIMREQGSG--MVVNTASVGGIRGI-GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRI 190

Query: 188 NGIARGL-----------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL 236
           N IA G             L  E P      +A +   +  P  R+ +   ++A+ V +L
Sbjct: 191 NAIAPGAIWTPMVENSMKQLDPENP-----RKAAEEFIQVNPSKRYGEAP-EIAAVVAFL 244

Query: 237 ISDGSRYMTGTTIYVDGAQS 256
           +SD + Y+  T + +DG QS
Sbjct: 245 LSDDASYVNATVVPIDGGQS 264

Catalyzes the regio- and stereoselective reversible NAD-dependent reduction of (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) to (4R,6R)-4-hydroxy-2,2,6-trimethylcyclohexanone (actinol).

Leifsonia aquatica (taxid: 144185)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q99LB2|DHRS4_MOUSE Dehydrogenase/reductase SDR family member 4 OS=Mus musculus GN=Dhrs4 PE=2 SV=3

 Score = 73.6 bits (179), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 122/253 (48%), Gaps = 18/253 (7%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL-- 63
           K  L+T+  D I   IA  LA+ G  +V+  + R+  +V ++ + +L+G + + V G+  
Sbjct: 34  KVALVTASTDGIGFAIARRLAEDGAHVVV--SSRKQQNV-DRAVATLQG-EGLSVTGIVC 89

Query: 64  --DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVA 121
                EDRE     A+ +   I    D  V          + + V E+ + K++ IN  A
Sbjct: 90  HVGKAEDREKLITTALKRHQGI----DILVSNAAVNPFFGNLMDVTEEVWDKVLSINVTA 145

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
              ++KAV   M E + GGS+V + S+ G  R  +P    Y     ++  L +  A E+ 
Sbjct: 146 TAMMIKAVVPEM-EKRGGGSVVIVGSVAGFTR--FPSLGPYNVSKTALLGLTKNFAAELA 202

Query: 182 KHKIRVNGIARGLHLQDEYPIAVGQERAVK-LVREAAPLHRWLDVKNDLASTVIYLISDG 240
              IRVN +A GL ++  +   + +E+A +  ++EA  + R L    D A  V +L S+ 
Sbjct: 203 PKNIRVNCLAPGL-IKTRFSSVLWEEKAREDFIKEAMQIRR-LGKPEDCAGIVSFLCSED 260

Query: 241 SRYMTGTTIYVDG 253
           + Y+ G T+ V G
Sbjct: 261 ASYINGETVVVGG 273

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q8VID1|DHRS4_RAT Dehydrogenase/reductase SDR family member 4 OS=Rattus norvegicus GN=Dhrs4 PE=2 SV=2

 Score = 73.2 bits (178), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 125/253 (49%), Gaps = 18/253 (7%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL-- 63
           K  L+T+  D I   IA  LA+ G  +V+  + R+  +V ++ + +L+G + + V G+  
Sbjct: 34  KVALVTASTDGIGLAIARRLAEDGAHVVI--SSRKQQNV-DRAVATLQG-EGLSVTGVVC 89

Query: 64  --DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVA 121
                EDRE    + V+ A ++   +D  V          + + V E+ + K++ IN  A
Sbjct: 90  HVGKAEDRE----KLVNMALKLHQGIDILVSNAAVNPFFGNLMDVTEEVWNKVLSINVTA 145

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
              ++KAV   M E + GGS+V ++S+ G    L+P    Y     ++  L +  A E+ 
Sbjct: 146 SAMMIKAVVPAM-EKRGGGSVVIVSSVAGFV--LFPSLGPYNVSKTALLGLTKNFAAELA 202

Query: 182 KHKIRVNGIARGLHLQDEYPIAVGQERA-VKLVREAAPLHRWLDVKNDLASTVIYLISDG 240
              IRVN +A GL ++  +   + +E+A  ++++E   + R L    D    V +L S+ 
Sbjct: 203 PKNIRVNCLAPGL-IKTHFSSVLWKEKAREEMIKETMQIRR-LGKPEDCVGIVSFLCSED 260

Query: 241 SRYMTGTTIYVDG 253
           + Y+ G T+ V G
Sbjct: 261 ASYINGETVVVGG 273

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q5RCF8|DHRS4_PONAB Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=3

 Score = 72.8 bits (177), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 120/252 (47%), Gaps = 16/252 (6%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVG--- 62
           K  L+T+  D I   IA  LA+ G  +V+  + R+  +V ++ + +L+G + + V G   
Sbjct: 33  KVALVTASTDGIGFAIARRLAQDGAHVVV--SSRKQQNV-DQAVATLQG-EGLSVTGTVC 88

Query: 63  -LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVA 121
            +   EDRE      V  A ++ G +D  V            + V E+ + K + IN  A
Sbjct: 89  HVGKAEDRE----RLVATAVKLHGGIDILVSNAAVNPFFGSLMDVTEEVWDKTLDINVKA 144

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
           P  + KAV   M E + GGS+V ++SI  A     PG + Y     ++  L +T A+E+ 
Sbjct: 145 PALMTKAVVPEM-EKRGGGSVVIVSSI--AAFSPSPGFSPYNVSKTALLGLTKTLAIELA 201

Query: 182 KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 241
              IRVN +A GL ++  +   +  ++  +   +     R L    D A  V +L S+ +
Sbjct: 202 PRNIRVNCLAPGL-IKTSFSRMLWMDKEKEESMKETLRIRRLGEPEDCAGIVSFLCSEDA 260

Query: 242 RYMTGTTIYVDG 253
            Y+TG T+ V G
Sbjct: 261 SYITGETVVVGG 272

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	266
TAIR|locus:2078693	296	AT3G01980 [Arabidopsis thalian	0.635	0.570	0.633	1.3e-84
TAIR|locus:2100621	280	AT3G55290 [Arabidopsis thalian	0.951	0.903	0.321	1.2e-28
TAIR|locus:505006251	312	AT2G17845 [Arabidopsis thalian	0.954	0.814	0.311	5e-28
TAIR|locus:2100636	279	AT3G55310 [Arabidopsis thalian	0.951	0.906	0.310	3.5e-27
TAIR|locus:2075296	288	AT3G46170 [Arabidopsis thalian	0.951	0.878	0.302	5.7e-27
TAIR|locus:2031376	282	AT1G63380 [Arabidopsis thalian	0.951	0.897	0.301	6.6e-26
UNIPROTKB|P33368	253	yohF "predicted oxidoreductase	0.913	0.960	0.270	5.3e-17
UNIPROTKB|O06348	314	Rv3485c "Probable short-chain	0.932	0.789	0.264	2e-16
CGD|CAL0001490	260	orf19.5763 [Candida albicans (	0.894	0.915	0.248	4.7e-16
UNIPROTKB|Q5A8I5	260	SPS19 "Putative uncharacterize	0.894	0.915	0.248	4.7e-16

TAIR|locus:2078693 AT3G01980 [Arabidopsis thaliana (taxid:3702)]

 Score = 563 (203.2 bits), Expect = 1.3e-84, Sum P(2) = 1.3e-84
 Identities = 107/169 (63%), Positives = 131/169 (77%)

Query:    98 GKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP 157
             GK+QD LQV +DEF ++ KIN  APWFLLKAV  RMK+  +GGSIVF+ +I   ER LYP
Sbjct:   128 GKVQDILQVSQDEFHRITKINLTAPWFLLKAVATRMKDHGSGGSIVFMATIASGERALYP 187

Query:   158 XXXXXXXXXXSIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAA 217
                       +IHQLVR +AM +GKHKIRVN I+RGLHL DEY  +VG++RA KLV++AA
Sbjct:   188 GADAYASTSAAIHQLVRASAMSLGKHKIRVNMISRGLHLDDEYTASVGRDRAQKLVKDAA 247

Query:   218 PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRMRSYM 266
             PL +WL+   DL STVIYLISDGSR+MTGTT+ VDGAQS+TRPR++SYM
Sbjct:   248 PLGQWLNPDTDLYSTVIYLISDGSRFMTGTTVLVDGAQSLTRPRLKSYM 296

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005777 "peroxisome" evidence=IDA

TAIR|locus:2100621 AT3G55290 [Arabidopsis thaliana (taxid:3702)]

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 83/258 (32%), Positives = 127/258 (49%)

Query:     2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-RRLSSVAEKMMGSLKGGQPVEV 60
             E + K VL+T     I + I   LAK GC+++       RL+S+  ++      G     
Sbjct:    17 ELKDKVVLVTGASSGIGREICLDLAKAGCQVIAAARRVDRLNSLCSEINSFSSTGIQAAA 76

Query:    61 VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFV 120
             + LD+  D      +AV +A  I G +DA ++     G ++  L + EDE+  + K N  
Sbjct:    77 LELDVSSDA-ATIQKAVREAWDIFGKIDALINNAGIRGNVKSSLDLSEDEWDNVFKTNLK 135

Query:   121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEI 180
              PW + K V   M+++K GGS++ ++SI G  RG+ P           +  + R  A+E+
Sbjct:   136 GPWLVSKHVCMLMRDAKRGGSVINISSIAGI-RGMLPGGLAYACSKGGVDTMSRMMALEL 194

Query:   181 GKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE-AAPLHRWLDVKNDLASTVIYLISD 239
             G HKIRVN IA GL  + E    + Q+  +K V E   PL     V   L S V YLI D
Sbjct:   195 GVHKIRVNSIAPGL-FKSEITQGLMQKEWLKNVTERTVPLKVQQTVDPGLTSLVRYLIHD 253

Query:   240 GSRYMTGTTIYVDGAQSI 257
              S+Y++G T  VD   ++
Sbjct:   254 SSQYISGNTYIVDSGATL 271

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005777 "peroxisome" evidence=IDA

TAIR|locus:505006251 AT2G17845 [Arabidopsis thaliana (taxid:3702)]

 Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
 Identities = 81/260 (31%), Positives = 128/260 (49%)

Query:     2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-RRLSSVAEKMMG-SLKGGQPVE 59
             E + K VL+T     I + +   LAK GC+++       RL S+  ++       G   E
Sbjct:    46 ELKDKVVLVTGASSGIGREVCLDLAKAGCKIIAAARRVDRLKSLCSEINRFEYSAGIQAE 105

Query:    60 VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINF 119
              + LD+  D      +AV KA +I G +DA ++   + G ++  L + EDE+ K+ K N 
Sbjct:   106 ALELDVSSDA-ATVQKAVKKAWEIFGKIDALINNAGFRGNVKSSLDLSEDEWDKVFKTNL 164

Query:   120 VAPWFLLKAVGRRMKESK-AGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAM 178
                W + K V   M+++K  GGS++ ++S+    RG  P           +  + R  A+
Sbjct:   165 TGTWLVSKYVCILMRDAKRGGGSVINISSVSWLHRGQVPGGVAYACSKGGVDTMTRMMAL 224

Query:   179 EIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE-AAPLHRWLDVKNDLASTVIYLI 237
             E+G +KIRVN IA GL L+ E    + Q+  +K V E   PL     V   L S + YL+
Sbjct:   225 ELGVYKIRVNSIAPGL-LKSEITQGLMQKEWLKTVIERTVPLKVQQTVDPGLTSLLRYLV 283

Query:   238 SDGSRYMTGTTIYVDGAQSI 257
              D S+Y++G T  VD   S+
Sbjct:   284 HDSSKYISGNTYIVDAGASL 303

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2100636 AT3G55310 [Arabidopsis thaliana (taxid:3702)]

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 80/258 (31%), Positives = 126/258 (48%)

Query:     2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-RRLSSVAEKMMGSLKGGQPVEV 60
             E + K VL+T     I + I   LAK GC+++       RL+S+  ++      G     
Sbjct:    16 ELKDKVVLVTGASSGIGREICLDLAKAGCQVIAAARRVDRLNSLCSEINSFSSTGIQAAA 75

Query:    61 VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFV 120
             + LD+  D      +AV +A  I G +DA ++     G ++  L + EDE+  +   N  
Sbjct:    76 LELDVSSDA-ATIQKAVREAWDIFGKIDALINNAGIRGNVKLSLDLSEDEWDNVFNTNLK 134

Query:   121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEI 180
              PW + K V   M+++K GGS++ ++S+ G  R + P           +  + R  A+E+
Sbjct:   135 GPWLVAKYVCVLMRDAKRGGSVINISSVAGV-RSIVPGGLAYSCSKGGVDTMSRMMAIEL 193

Query:   181 GKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE-AAPLHRWLDVKNDLASTVIYLISD 239
             G HKIRVN IA GL  + E   A+ Q+  +K V E   PL     +   L S V YLI D
Sbjct:   194 GVHKIRVNSIAPGL-FKSEITQALMQKEWLKNVTERTVPLKVQQTIDPGLTSLVRYLIHD 252

Query:   240 GSRYMTGTTIYVDGAQSI 257
              S+Y++G T  VD   ++
Sbjct:   253 SSQYISGNTYIVDSGATL 270

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0016020 "membrane" evidence=IDA

TAIR|locus:2075296 AT3G46170 [Arabidopsis thaliana (taxid:3702)]

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 78/258 (30%), Positives = 125/258 (48%)

Query:     2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-RRLSSVAEKMMGSLKGGQPVEV 60
             E + K VL+T     I + I   L K GC+++ V     RL+S+  ++  S   G     
Sbjct:    25 ELKDKVVLVTGASSGIGREICLDLGKAGCKIIAVARRVDRLNSLCSEINSSSSTGIQAAA 84

Query:    61 VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFV 120
             + LD+  D      + V  A  I G +DA ++     G ++  L + ++E+  + K N  
Sbjct:    85 LKLDVTSDA-ATIQKVVQGAWGIFGKIDALINNAGIRGNVKSSLDLSKEEWDNVFKTNLT 143

Query:   121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEI 180
              PW + K V   M+++K GGS++ ++SI G  RG+ P           +  + +  A+E+
Sbjct:   144 GPWLVSKYVCVLMRDAKLGGSVINISSIAGI-RGILPGALAYACSKIGVDTMSKMMAVEL 202

Query:   181 GKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE-AAPLHRWLDVKNDLASTVIYLISD 239
             G HKIRVN IA G+  + E    + Q+   K V E   PL     V   + S V YLI D
Sbjct:   203 GVHKIRVNSIAPGI-FKSEITQGLMQKEWFKNVTERTVPLKLQQTVDPGITSLVRYLIHD 261

Query:   240 GSRYMTGTTIYVDGAQSI 257
              S+Y++G T  VD   ++
Sbjct:   262 SSQYISGNTYIVDSGATL 279

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0046686 "response to cadmium ion" evidence=IEP

TAIR|locus:2031376 AT1G63380 [Arabidopsis thaliana (taxid:3702)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 78/259 (30%), Positives = 127/259 (49%)

Query:     2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-RRLSSVAEKMMGSLKGGQPVEV 60
             E + K VL+T     I + I   L K GC++V       RL+S+  ++  S  G   V+ 
Sbjct:    16 ELKDKVVLVTGASSGIGREICLDLCKAGCKIVAAARRVDRLNSLCSEI-NSF-GAIGVQA 73

Query:    61 VGLDMEEDREG-AFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINF 119
             V L+++   E     +AV +A +  G +D  ++     G ++  L + E+E+ K+ + N 
Sbjct:    74 VALELDVSSEADTIRKAVKEAWETFGKIDVLINNAGIRGNVKSSLDLSEEEWDKVFRTNL 133

Query:   120 VAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAME 179
                W + K V   M++++ GGS++ ++SI G  RGL             +  + R  A+E
Sbjct:   134 TGSWLISKYVCLLMRDAERGGSVINVSSISGLHRGLLRGGLAYACSKGGVDTMTRMMAIE 193

Query:   180 IGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE-AAPLHRWLDVKNDLASTVIYLIS 238
             +  +KIRVN IA G+  + E    + Q+  +K V E   PL     V   L S V YLI 
Sbjct:   194 LAVYKIRVNSIAPGI-FRSEITQGLFQKEWLKKVTEKVVPLKMQQTVDPGLTSLVRYLIH 252

Query:   239 DGSRYMTGTTIYVDGAQSI 257
             D S+Y+TG T  VD   ++
Sbjct:   253 DSSQYVTGNTYIVDSGTTL 271

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

UNIPROTKB|P33368 yohF "predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain" [Escherichia coli K-12 (taxid:83333)]

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 71/262 (27%), Positives = 125/262 (47%)

Query:     5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLV--GNERRLSSVAEKMMGSLKGGQPVEVVG 62
             A+  ++T+    I K  A  LA++G  + +    +E      A +++     G   E+V 
Sbjct:     2 AQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSH---GVRAEIVQ 58

Query:    63 LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM-QDP-LQVGEDEFKKLVKINFV 120
             LD+    EGA   A++K  Q LG +D  V+     G M + P L +  DE++K+  ++  
Sbjct:    59 LDLGNLPEGAL--ALEKLIQRLGRIDVLVN---NAGAMTKAPFLDMAFDEWRKIFTVDVD 113

Query:   121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEI 180
               +   +   R+M +   GG I+ +TS+   E    P          ++  L +  A+E+
Sbjct:   114 GAFLCSQIAARQMVKQGQGGRIINITSV--HEHTPLPDASAYTAAKHALGGLTKAMALEL 171

Query:   181 GKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAA-PLHRWLDVKNDLASTVIYLISD 239
              +HKI VN +A G       P+    +  VK   E + PL R+    +++AS V++L S+
Sbjct:   172 VRHKILVNAVAPGAIAT---PMNGMDDSDVKPDAEPSIPLRRF-GATHEIASLVVWLCSE 227

Query:   240 GSRYMTGTTIYVDGAQSITRPR 261
             G+ Y TG ++ VDG   +  P+
Sbjct:   228 GANYTTGQSLIVDGGFMLANPQ 249

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|O06348 Rv3485c "Probable short-chain type dehydrogenase/reductase" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 204 (76.9 bits), Expect = 2.0e-16, P = 2.0e-16
 Identities = 68/257 (26%), Positives = 114/257 (44%)

Query:     4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
             Q +  L+T  G  I K +A  L   G  +++VG      + A K + +LK G  +     
Sbjct:    44 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAVKDIEALKTGA-IGYEPA 102

Query:    64 DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
             D+ ++ +      VD A    G L   VHC      +    Q+    +++ V +N     
Sbjct:   103 DITDEEQTL--RVVDAATAWHGRLHGVVHCAGGSQTIGPITQIDSQAWRRTVDLNVNGTM 160

Query:   124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKH 183
             ++LK   R +     GGS V ++SI  A    +           ++  +++ AA E+G  
Sbjct:   161 YVLKHAARELVRG-GGGSFVGISSI--AASNTHRWFGAYGVTKSAVDHMMKLAADELGPS 217

Query:   184 KIRVNGIARGLHLQD-EYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 242
              +RVN I  GL   D   P+    E +    R   PL R  +V+ D+A+  ++L+SD + 
Sbjct:   218 WVRVNSIRPGLIRTDLVVPVTESPELSADY-RVCTPLPRVGEVE-DVANLAMFLLSDAAS 275

Query:   243 YMTGTTIYVDGAQSITR 259
             ++TG  I VDG   + R
Sbjct:   276 WITGQVINVDGGHMLRR 292

GO:0005886 "plasma membrane" evidence=IDA

CGD|CAL0001490 orf19.5763 [Candida albicans (taxid:5476)]

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 62/250 (24%), Positives = 118/250 (47%)

Query:     9 LLTSDGDEISKNIAFHLAKRGC-RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEE 67
             +LT   + I    A  LA     +L+L          A+K++  +     ++ + +D  +
Sbjct:    13 ILTGGTNGIGLGYAKGLASADLDQLILTYRSESTLEKAKKIIHEVNPNVQIDGIKIDFLK 72

Query:    68 DREGAF-DEAVDKACQI--LGNLDAFVHCYTYEGKMQDPLQ-VGEDEFKKLVKINFVAPW 123
             D E     + V+++ ++    N+D  V+      +   P +   +D+F  ++K++   P 
Sbjct:    73 DEEDEIITKIVEESYKLSKTSNIDILVNNAGITERY--PFEDFPQDKFDDVIKVDLNIPV 130

Query:   124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKH 183
              L KA+G++M E+   G IVF  S++  + G+            ++ Q  +  + E    
Sbjct:   131 KLTKAIGKKMLETNTKGKIVFTASLLSFQGGML--STPYAISKGALKQFTQAVSNEWSSR 188

Query:   184 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
              IRVN IA G +++     ++ +E   K+V    P+ RW +  +D    ++YL SD S+Y
Sbjct:   189 GIRVNSIAPG-YIKTNLTDSMSEENK-KIVDLRIPMKRWGN-PDDFMGPIVYLTSDASKY 245

Query:   244 MTGTTIYVDG 253
             +TG T+ VDG
Sbjct:   246 VTGDTLLVDG 255

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q5A8I5 SPS19 "Putative uncharacterized protein SPS19" [Candida albicans SC5314 (taxid:237561)]

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 62/250 (24%), Positives = 118/250 (47%)

Query:     9 LLTSDGDEISKNIAFHLAKRGC-RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEE 67
             +LT   + I    A  LA     +L+L          A+K++  +     ++ + +D  +
Sbjct:    13 ILTGGTNGIGLGYAKGLASADLDQLILTYRSESTLEKAKKIIHEVNPNVQIDGIKIDFLK 72

Query:    68 DREGAF-DEAVDKACQI--LGNLDAFVHCYTYEGKMQDPLQ-VGEDEFKKLVKINFVAPW 123
             D E     + V+++ ++    N+D  V+      +   P +   +D+F  ++K++   P 
Sbjct:    73 DEEDEIITKIVEESYKLSKTSNIDILVNNAGITERY--PFEDFPQDKFDDVIKVDLNIPV 130

Query:   124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKH 183
              L KA+G++M E+   G IVF  S++  + G+            ++ Q  +  + E    
Sbjct:   131 KLTKAIGKKMLETNTKGKIVFTASLLSFQGGML--STPYAISKGALKQFTQAVSNEWSSR 188

Query:   184 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
              IRVN IA G +++     ++ +E   K+V    P+ RW +  +D    ++YL SD S+Y
Sbjct:   189 GIRVNSIAPG-YIKTNLTDSMSEENK-KIVDLRIPMKRWGN-PDDFMGPIVYLTSDASKY 245

Query:   244 MTGTTIYVDG 253
             +TG T+ VDG
Sbjct:   246 VTGDTLLVDG 255

GO:0005575 "cellular_component" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	1.1.1.56	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	266
cd05233	234	cd05233, SDR_c, classical (c) SDRs	1e-36
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-30
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-30
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	3e-29
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	5e-28
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	3e-27
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	4e-27
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	2e-24
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	7e-24
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	7e-24
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-23
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-23
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	4e-23
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	4e-23
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	3e-22
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	3e-22
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	1e-21
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	2e-21
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	2e-21
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-21
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	6e-21
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-21
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	1e-20
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	2e-20
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	2e-20
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	3e-20
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	4e-20
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	1e-19
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	2e-19
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	4e-19
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	8e-19
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	8e-19
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	9e-19
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	2e-18
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	2e-18
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	3e-18
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	5e-18
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	7e-18
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	8e-18
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	1e-17
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	1e-17
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	3e-17
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	3e-17
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	5e-17
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	5e-17
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-17
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	2e-16
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	2e-16
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	3e-16
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	4e-16
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	4e-16
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	7e-16
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	7e-16
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	1e-15
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	1e-15
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	2e-15
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	3e-15
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	3e-15
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	4e-15
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	5e-15
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	6e-15
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	7e-15
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	1e-14
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	1e-14
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	1e-14
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	1e-14
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	2e-14
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	2e-14
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	2e-14
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	2e-14
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	3e-14
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	4e-14
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	4e-14
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	8e-14
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	1e-13
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	1e-13
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	2e-13
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	2e-13
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	3e-13
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	3e-13
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	3e-13
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	3e-13
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	4e-13
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	6e-13
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	8e-13
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	1e-12
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	2e-12
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	2e-12
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	3e-12
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	3e-12
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	6e-12
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	7e-12
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	8e-12
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-11
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	2e-11
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	2e-11
PRK07889	256	PRK07889, PRK07889, enoyl-(acyl carrier protein) r	2e-11
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	2e-11
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	3e-11
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-11
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-11
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	4e-11
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	5e-11
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	6e-11
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	6e-11
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	7e-11
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	7e-11
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	2e-10
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	2e-10
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	2e-10
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	3e-10
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	3e-10
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	4e-10
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-10
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	4e-10
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	5e-10
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	6e-10
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-10
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	8e-10
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	8e-10
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	1e-09
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	1e-09
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	1e-09
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	2e-09
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	2e-09
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	2e-09
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	2e-09
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	3e-09
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	3e-09
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	4e-09
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	6e-09
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	6e-09
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-09
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	8e-09
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-08
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	3e-08
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	3e-08
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	3e-08
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	4e-08
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	6e-08
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	6e-08
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	6e-08
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	1e-07
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	1e-07
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	1e-07
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	1e-07
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	2e-07
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	3e-07
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	3e-07
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	4e-07
PRK06505	271	PRK06505, PRK06505, enoyl-(acyl carrier protein) r	4e-07
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	5e-07
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	8e-07
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	9e-07
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	1e-06
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	1e-06
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	1e-06
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	1e-06
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	1e-06
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	2e-06
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	2e-06
PRK07984	262	PRK07984, PRK07984, enoyl-(acyl carrier protein) r	2e-06
PRK08690	261	PRK08690, PRK08690, enoyl-(acyl carrier protein) r	2e-06
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	3e-06
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	3e-06
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	3e-06
PRK06997	260	PRK06997, PRK06997, enoyl-(acyl carrier protein) r	4e-06
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	4e-06
PRK06603	260	PRK06603, PRK06603, enoyl-(acyl carrier protein) r	4e-06
PLN02730	303	PLN02730, PLN02730, enoyl-[acyl-carrier-protein] r	5e-06
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	7e-06
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	9e-06
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	1e-05
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	1e-05
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	2e-05
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	2e-05
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	3e-05
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	3e-05
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	4e-05
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	4e-05
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	4e-05
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	4e-05
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	4e-05
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	5e-05
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	7e-05
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	1e-04
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	1e-04
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	1e-04
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	2e-04
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	2e-04
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	2e-04
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	2e-04
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	6e-04
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	6e-04
PRK06300	299	PRK06300, PRK06300, enoyl-(acyl carrier protein) r	8e-04
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	0.001
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	0.001
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	0.002
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	0.002
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	0.002
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	0.002
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	0.003
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	0.004

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  129 bits (326), Expect = 1e-36
 Identities = 72/245 (29%), Positives = 119/245 (48%), Gaps = 11/245 (4%)

Query: 8   VLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEE 67
            L+T     I + IA  LA+ G ++VL    R   ++AE       GG     V  D+ +
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLAD--RNEEALAELAAIEALGGN-AVAVQADVSD 57

Query: 68  DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLK 127
             E   +  V++A +  G LD  V+      +     ++ ++++ +++ +N    + L +
Sbjct: 58  --EEDVEALVEEALEEFGRLDILVNN-AGIARPGPLEELTDEDWDRVLDVNLTGVFLLTR 114

Query: 128 AVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRV 187
           A    MK+   GG IV ++S+    R   PG AAY A  A++  L R+ A+E+  + IRV
Sbjct: 115 AALPHMKKQG-GGRIVNISSV-AGLRP-LPGQAAYAASKAALEGLTRSLALELAPYGIRV 171

Query: 188 NGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGT 247
           N +A GL         +G E A K +  A PL R    + ++A  V++L SD + Y+TG 
Sbjct: 172 NAVAPGLVDTPMLA-KLGPEEAEKELAAAIPLGRLGTPE-EVAEAVVFLASDEASYITGQ 229

Query: 248 TIYVD 252
            I VD
Sbjct: 230 VIPVD 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  113 bits (285), Expect = 2e-30
 Identities = 69/259 (26%), Positives = 114/259 (44%), Gaps = 11/259 (4%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAE-KMMGSLKGGQPVE 59
           M+   K  L+T     I + IA  LA+ G R+V+        +           GG    
Sbjct: 1   MDLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAA 60

Query: 60  VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINF 119
            V  D+ +D E   +  V  A +  G +D  V+     G      ++ E+++ +++ +N 
Sbjct: 61  AVAADVSDDEESV-EALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNL 119

Query: 120 VAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME 179
           +  + L +A    MK+      IV ++S+ G   G  PG AAY A  A++  L +  A+E
Sbjct: 120 LGAFLLTRAALPLMKK----QRIVNISSVAG--LGGPPGQAAYAASKAALIGLTKALALE 173

Query: 180 IGKHKIRVNGIARGLHLQDEYPIAVGQER-AVKLVREAAPLHRWLDVKNDLASTVIYLIS 238
           +    IRVN +A G             E  A+K +    PL R    + ++A+ V +L S
Sbjct: 174 LAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPE-EVAAAVAFLAS 232

Query: 239 DG-SRYMTGTTIYVDGAQS 256
           D  + Y+TG T+ VDG   
Sbjct: 233 DEAASYITGQTLPVDGGLL 251

Length = 251

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  112 bits (282), Expect = 7e-30
 Identities = 64/269 (23%), Positives = 113/269 (42%), Gaps = 37/269 (13%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVE 59
           M  Q K  L+T     I + IA  LA  G ++V+   NE    ++A ++  +   G    
Sbjct: 1   MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA---GGEAR 57

Query: 60  VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVG-----------E 108
           V+  D+ +  E A    ++ A +  G LD  V+              G           E
Sbjct: 58  VLVFDVSD--EAAVRALIEAAVEAFGALDILVNN------------AGITRDALLPRMSE 103

Query: 109 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 168
           +++ +++ +N    + +++A    M +++  G IV ++S+ G      PG   Y A  A 
Sbjct: 104 EDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVT--GNPGQTNYSAAKAG 160

Query: 169 IHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAA-PLHRWLDVKN 227
           +    +  A+E+    I VN +A G     +  +  G    VK       PL R    + 
Sbjct: 161 VIGFTKALALELASRGITVNAVAPGF---IDTDMTEGLPEEVKAEILKEIPLGRLGQPE- 216

Query: 228 DLASTVIYLISDGSRYMTGTTIYVDGAQS 256
           ++A+ V +L SD + Y+TG  I V+G   
Sbjct: 217 EVANAVAFLASDAASYITGQVIPVNGGMY 245

Length = 246

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  110 bits (277), Expect = 3e-29
 Identities = 74/266 (27%), Positives = 120/266 (45%), Gaps = 30/266 (11%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
           + K   +T  G  I K IA   A+ G  + + G     L + AE++  +   G     + 
Sbjct: 2   KGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSA--TGGRAHPIQ 59

Query: 63  LDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL-QVGEDEFKKLVKINF 119
            D+   E  E A DE + +     G +D  ++     G    P   +  + FK ++ I+ 
Sbjct: 60  CDVRDPEAVEAAVDETLKE----FGKIDILINNA--AGNFLAPAESLSPNGFKTVIDIDL 113

Query: 120 VAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME 179
              +   KAVG+R+ E+K GGSI+ +++   A  G  P      A  A +  L R+ A+E
Sbjct: 114 NGTFNTTKAVGKRLIEAKHGGSILNISAT-YAYTGS-PFQVHSAAAKAGVDALTRSLAVE 171

Query: 180 IGKHKIRVNGIARGLHLQDEYPIA--------VGQERAVKLVREAAPLHRWLDVKNDLAS 231
            G + IRVN IA G       PI             ++ K + E  PL R      ++A+
Sbjct: 172 WGPYGIRVNAIAPG-------PIPTTEGMERLAPSGKSEKKMIERVPLGRL-GTPEEIAN 223

Query: 232 TVIYLISDGSRYMTGTTIYVDGAQSI 257
             ++L+SD + Y+ GTT+ VDG Q +
Sbjct: 224 LALFLLSDAASYINGTTLVVDGGQWL 249

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score =  106 bits (268), Expect = 5e-28
 Identities = 79/252 (31%), Positives = 117/252 (46%), Gaps = 42/252 (16%)

Query: 21  IAFHLAKR----GCRLVLVG--NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFD 74
           IA+ +AK     G  +VL       R+ +V E     L    P +V+ LD+  D     D
Sbjct: 8   IAWAIAKAAAEEGAEVVLTTWPPALRMGAVDE-----LAKELPADVIPLDVTSD--EDID 60

Query: 75  EAVDKACQILGNLDAFVHC--YTYEGKMQDP-LQVGEDEFKKLVKIN---FVAPWFLLKA 128
           E  +K  +  G +D  VH    + E +   P L    + F K + I+   F++   L KA
Sbjct: 61  ELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFIS---LAKA 117

Query: 129 VGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVN 188
               M E   GGSIV L+ I  AER ++PG    G   A++  L R  A E+G+  IRVN
Sbjct: 118 AKPLMNE---GGSIVALSYI-AAER-VFPGYGGMGVAKAALESLARYLAYELGRKGIRVN 172

Query: 189 GIARGLHLQDEYPI-------AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 241
            I+ G       P          G ++ V+   E APL R    + ++A+   +L+SD +
Sbjct: 173 TISAG-------PTKTTAGSGIGGFDKMVEYAEEMAPLGRNASAE-EVANAAAFLLSDLA 224

Query: 242 RYMTGTTIYVDG 253
           R +TG  +YVDG
Sbjct: 225 RGITGQILYVDG 236

Length = 239

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  105 bits (264), Expect = 3e-27
 Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 23/257 (8%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
           + +  L+T     I + IA  LA  G  +++V       ++ AE +  +  GG+      
Sbjct: 5   EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA--GGK-ARARQ 61

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
           +D+  DR  A   AV    +  G LD  V        +    ++ ++++++++ +N    
Sbjct: 62  VDVR-DRA-ALKAAVAAGVEDFGRLDILVANAGIFP-LTPFAEMDDEQWERVIDVNLTGT 118

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
           + L +A    +  +  GG IV  +S+ G   G YPG A Y A  A +    R  A+E+  
Sbjct: 119 FLLTQAALPALIRA-GGGRIVLTSSVAGPRVG-YPGLAHYAASKAGLVGFTRALALELAA 176

Query: 183 HKIRVNGIARGLHLQDEYPIA------VGQERAVKLVREAAPLHRWLDVKNDLASTVIYL 236
             I VN +  G        +       +G  +  + +  A PL R  + + D+A+ V++L
Sbjct: 177 RNITVNSVHPGG-------VDTPMAGNLGDAQWAEAIAAAIPLGRLGEPE-DIAAAVLFL 228

Query: 237 ISDGSRYMTGTTIYVDG 253
            SD +RY+TG T+ VDG
Sbjct: 229 ASDEARYITGQTLPVDG 245

Length = 251

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  104 bits (262), Expect = 4e-27
 Identities = 71/254 (27%), Positives = 112/254 (44%), Gaps = 16/254 (6%)

Query: 8   VLLTSDGDEISKNIAFHLAKRGCRLVLV--GNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
            L+T     I K IA  LA+RG  +V+    ++   + VA ++     GG+   VV  D+
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEEL--GGK-AVVVRADV 57

Query: 66  E--EDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
              +D E  F    ++     G LD  V      G  +   ++    +   +  N  A  
Sbjct: 58  SQPQDVEEMFAAVKER----FGRLDVLVSN-AAAGAFRPLSELTPAHWDAKMNTNLKALV 112

Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 183
              +   + M+E   GG IV ++S+ G+ R   P   A G   A++  LVR  A+E+G  
Sbjct: 113 HCAQQAAKLMRERG-GGRIVAISSL-GSIR-ALPNYLAVGTAKAALEALVRYLAVELGPR 169

Query: 184 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
            IRVN ++ G+   D       +E  ++      P  R      D+A  V +L SD +R 
Sbjct: 170 GIRVNAVSPGVIDTDALAHFPNREDLLEAAAANTPAGRVGTP-QDVADAVGFLCSDAARM 228

Query: 244 MTGTTIYVDGAQSI 257
           +TG T+ VDG  SI
Sbjct: 229 ITGQTLVVDGGLSI 242

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 97.8 bits (244), Expect = 2e-24
 Identities = 66/250 (26%), Positives = 104/250 (41%), Gaps = 9/250 (3%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
           + K  L+T     I   IA  LA+ G  +V   N R      E      K G        
Sbjct: 4   KGKVALVTGASRGIGFGIASGLAEAGANIV--INSRNEEKAEEAQQLIEKEGVEATAFTC 61

Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
           D+ +  E A   AV+   +  G +D  V+      +     +  E E++ ++ +N    +
Sbjct: 62  DVSD--EEAIKAAVEAIEEDFGKIDILVNNAGI-IRRHPAEEFPEAEWRDVIDVNLNGVF 118

Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 183
           F+ +AV R M +    G I+ + S++ +E G  P   AY A    +  L +  A E  +H
Sbjct: 119 FVSQAVARHMIKQG-HGKIINICSLL-SELG-GPPVPAYAASKGGVAGLTKALATEWARH 175

Query: 184 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
            I+VN IA G    +     V        + +  P  RW   + DL    ++L SD S Y
Sbjct: 176 GIQVNAIAPGYFATEMTEAVVADPEFNDDILKRIPAGRWGQPE-DLVGAAVFLASDASDY 234

Query: 244 MTGTTIYVDG 253
           + G  I+VDG
Sbjct: 235 VNGQIIFVDG 244

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 96.2 bits (240), Expect = 7e-24
 Identities = 67/257 (26%), Positives = 114/257 (44%), Gaps = 23/257 (8%)

Query: 3   NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK--GGQPVEV 60
              K  L+T     I + IA  LA+ G  +V+  N     + AE+++  ++  GG+    
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVV--NYASSKAAAEEVVAEIEAAGGK-AIA 57

Query: 61  VGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ--DPLQVGEDEFKKLVK 116
           V  D+         FD A     +  G +D  V+     G M      +  E+EF ++  
Sbjct: 58  VQADVSDPSQVARLFDAAE----KAFGGVDILVN---NAGVMLKKPIAETSEEEFDRMFT 110

Query: 117 INFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTA 176
           +N    +F+L+   +R+++   GG I+ ++S + A     P   AY    A++    R  
Sbjct: 111 VNTKGAFFVLQEAAKRLRD---GGRIINISSSLTAAY--TPNYGAYAGSKAAVEAFTRVL 165

Query: 177 AMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL 236
           A E+G   I VN +A G    D +  A   E AV+   + +PL R  + + D+A  V +L
Sbjct: 166 AKELGGRGITVNAVAPGPVDTDMF-YAGKTEEAVEGYAKMSPLGRLGEPE-DIAPVVAFL 223

Query: 237 ISDGSRYMTGTTIYVDG 253
            S   R++ G  I  +G
Sbjct: 224 ASPDGRWVNGQVIRANG 240

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 96.8 bits (241), Expect = 7e-24
 Identities = 78/265 (29%), Positives = 126/265 (47%), Gaps = 9/265 (3%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
           Q +  L+T  G  I K +A  L   G  +++VG N  +L++ AE++  +LKG   V    
Sbjct: 6   QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEI-EALKGAGAVRYEP 64

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
            D+ ++ + A   AVD A    G L   VHC      +    Q+  D +++ V +N    
Sbjct: 65  ADVTDEDQVA--RAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGT 122

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
            ++LK   R +     GGS V ++SI  +    + GA  YG   +++  L++ AA E+G 
Sbjct: 123 MYVLKHAARELVRG-GGGSFVGISSIAASNTHRWFGA--YGVTKSAVDHLMKLAADELGP 179

Query: 183 HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 242
             +RVN I  GL   D               R   PL R  +V+ D+A+  ++L+SD + 
Sbjct: 180 SWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVE-DVANLAMFLLSDAAS 238

Query: 243 YMTGTTIYVDGAQSITR-PRMRSYM 266
           ++TG  I VDG   + R P   S +
Sbjct: 239 WITGQVINVDGGHMLRRGPDFSSML 263

Length = 276

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 95.6 bits (239), Expect = 1e-23
 Identities = 71/258 (27%), Positives = 121/258 (46%), Gaps = 20/258 (7%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKG-GQPVE 59
           M  + K  L+T     I + IA  LA +G  +V+  N     + AE ++  +   G    
Sbjct: 1   MSLEGKVALVTGASRGIGRAIAERLAAQGANVVI--NYASSEAGAEALVAEIGALGGKAL 58

Query: 60  VVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLV 115
            V  D+   E  E A DEA  +     G +D  V+     G  +D L  ++ E+++ +++
Sbjct: 59  AVQGDVSDAESVERAVDEAKAE----FGGVDILVNN---AGITRDNLLMRMKEEDWDRVI 111

Query: 116 KINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRT 175
             N    + L KAV R M + +  G I+ ++S++G      PG A Y A  A +    ++
Sbjct: 112 DTNLTGVFNLTKAVARPMMK-QRSGRIINISSVVGLMGN--PGQANYAASKAGVIGFTKS 168

Query: 176 AAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY 235
            A E+    I VN +A G    D    A+ ++    ++    PL R    + ++AS V +
Sbjct: 169 LARELASRGITVNAVAPGFIETDMTD-ALPEDVKEAIL-AQIPLGRLGQPE-EIASAVAF 225

Query: 236 LISDGSRYMTGTTIYVDG 253
           L SD + Y+TG T++V+G
Sbjct: 226 LASDEAAYITGQTLHVNG 243

Length = 248

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 95.7 bits (239), Expect = 1e-23
 Identities = 69/244 (28%), Positives = 104/244 (42%), Gaps = 19/244 (7%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK 79
           IA   A  G R+V+   NE     VA      +  G     V  D+    E   + AV  
Sbjct: 21  IARRFAAEGARVVVTDRNEEAAERVAA----EILAGGRAIAVAADV--SDEADVEAAVAA 74

Query: 80  ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAG 139
           A +  G++D  V+      +    L V E EF ++  +N  +P+   +A    M+    G
Sbjct: 75  ALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-G 133

Query: 140 GSIVFLTSIIGAERGLYPGAAAYGAC-AASIHQLVRTAAMEIGKHKIRVNGIARGL---- 194
           G+IV + S     R   PG   Y A   A I  L +  A E+G  KIRVN +A  +    
Sbjct: 134 GAIVNVAST-AGLRP-RPGLGWYNASKGAVIT-LTKALAAELGPDKIRVNAVAPVVVETG 190

Query: 195 HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 254
            L+        + RA        PL R L    D+A+  ++L SD + ++TG T+ VDG 
Sbjct: 191 LLEAFMGEPTPENRAK--FLATIPLGR-LGTPEDIANAALFLASDEASWITGVTLVVDGG 247

Query: 255 QSIT 258
           + + 
Sbjct: 248 RCVG 251

Length = 251

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 94.7 bits (236), Expect = 4e-23
 Identities = 68/263 (25%), Positives = 117/263 (44%), Gaps = 26/263 (9%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
              RVL+T     I + IA   A+ G R+ +   +E  L++ A ++ G+       +V  
Sbjct: 10  DGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADV-- 67

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVH---CYTYEGKMQDPLQVGEDEFKKLVKINF 119
                      +   D A +  G LD  V+        G + +   +  +++++ + +N 
Sbjct: 68  -----ADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDE---ITPEQWEQTLAVNL 119

Query: 120 VAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME 179
              ++  +A    +K S  GG I+ L+S+ G  R  YPG   Y A   ++  LV++ A+E
Sbjct: 120 NGQFYFARAAVPLLKASGHGGVIIALSSVAG--RLGYPGRTPYAASKWAVVGLVKSLAIE 177

Query: 180 IGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVR------EAAPLHRWLDVKNDLA 230
           +G   IRVN I  G+           A  Q+  + L        E   L R ++   D+A
Sbjct: 178 LGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEP-EDIA 236

Query: 231 STVIYLISDGSRYMTGTTIYVDG 253
           +T ++L S  +RY+TG  I VDG
Sbjct: 237 ATALFLASPAARYITGQAISVDG 259

Length = 264

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 93.9 bits (234), Expect = 4e-23
 Identities = 77/250 (30%), Positives = 117/250 (46%), Gaps = 21/250 (8%)

Query: 8   VLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEE 67
            L+T     I + IA  LA  G R+V+  +  R  + A+++   L   +    V +  + 
Sbjct: 3   ALVTGAAKRIGRAIAEALAAEGYRVVV--HYNRSEAEAQRLKDELNALR-NSAVLVQADL 59

Query: 68  DREGAFDEAVDKACQILGNLDAFVH---CYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
               A  + V  A +  G  D  V+    +          Q  ED + +L  IN  AP+ 
Sbjct: 60  SDFAACADLVAAAFRAFGRCDVLVNNASAFYPT----PLGQGSEDAWAELFGINLKAPYL 115

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           L++A  RR+  S   GSI+ +   +  +R L  G  AY    A++  L R+AA+E+    
Sbjct: 116 LIQAFARRLAGS-RNGSIINIIDAM-TDRPL-TGYFAYCMSKAALEGLTRSAALELAP-N 171

Query: 185 IRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
           IRVNGIA GL L  E   A  +E A++ V    PL R    + ++A  VI+L+   S Y+
Sbjct: 172 IRVNGIAPGLILLPEDMDAEYRENALRKV----PLKRRPSAE-EIADAVIFLLD--SNYI 224

Query: 245 TGTTIYVDGA 254
           TG  I VDG 
Sbjct: 225 TGQIIKVDGG 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 92.1 bits (229), Expect = 3e-22
 Identities = 63/267 (23%), Positives = 111/267 (41%), Gaps = 33/267 (12%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K  ++T     I    A   A+ G RL L G +  RL    +  + +    + + +V  D
Sbjct: 4   KVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVVAD 63

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVH---CYTYEGKMQDPLQVGEDEFKKLVKINFVA 121
           + E+     D  +       G LD  V+        G     ++    E+ K++ +N  A
Sbjct: 64  LTEEEG--QDRIISTTLAKFGRLDILVNNAGILAKGGGEDQDIE----EYDKVMNLNLRA 117

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
             +L K     + ++K  G IV ++S+ G     +PG   Y    A++ Q  R  A+E+ 
Sbjct: 118 VIYLTKLAVPHLIKTK--GEIVNVSSVAGGRS--FPGVLYYCISKAALDQFTRCTALELA 173

Query: 182 KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAA-----------PLHRWLDVKNDLA 230
              +RVN ++ G+       I  G  R + +  E             PL R   V +++A
Sbjct: 174 PKGVRVNSVSPGV-------IVTGFHRRMGMPEEQYIKFLSRAKETHPLGRPGTV-DEVA 225

Query: 231 STVIYLISDGSRYMTGTTIYVDGAQSI 257
             + +L SD S ++TG  + VDG + +
Sbjct: 226 EAIAFLASDASSFITGQLLPVDGGRHL 252

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 91.5 bits (228), Expect = 3e-22
 Identities = 70/249 (28%), Positives = 114/249 (45%), Gaps = 16/249 (6%)

Query: 8   VLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKG-GQPVEVVGLDME 66
            L+T     I + IA  LAK G ++++    R     AE+++  LK  G     V  D+ 
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVII--TYRSSEEGAEEVVEELKAYGVKALGVVCDVS 58

Query: 67  EDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKKLVKINFVAPWF 124
            DRE      V++  + LG +D  V      G  +D L +   E+++  ++  N    + 
Sbjct: 59  -DRE-DVKAVVEEIEEELGPIDILV---NNAGITRDNLLMRMKEEDWDAVIDTNLTGVFN 113

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           L +AV R M + +  G I+ ++S++G   G   G A Y A  A +    ++ A E+    
Sbjct: 114 LTQAVLRIMIKQR-SGRIINISSVVGL-MG-NAGQANYAASKAGVIGFTKSLAKELASRN 170

Query: 185 IRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
           I VN +A G    D        E+  K +    PL R      ++A+ V +L SD + Y+
Sbjct: 171 ITVNAVAPGFIDTDM--TDKLSEKVKKKILSQIPLGR-FGTPEEVANAVAFLASDEASYI 227

Query: 245 TGTTIYVDG 253
           TG  I+VDG
Sbjct: 228 TGQVIHVDG 236

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 90.6 bits (225), Expect = 1e-21
 Identities = 77/270 (28%), Positives = 118/270 (43%), Gaps = 43/270 (15%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K  L+T     I K IA  LAK G  + +   NE      A+++  +  GG+ V    LD
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEI--NQAGGKAV-AYKLD 57

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVH----CYTYEGKMQDP-LQVGEDEFKKLVKINF 119
           +  D++     A+D+A +  G  D  V+              P L++ E+E KK+  +N 
Sbjct: 58  VS-DKD-QVFSAIDQAAEKFGGFDVMVNNAGVAPI------TPILEITEEELKKVYNVNV 109

Query: 120 VAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME 179
               F ++A  R+ K+   GG I+   SI G E    P  +AY +   ++  L +TAA E
Sbjct: 110 KGVLFGIQAAARQFKKQGHGGKIINAASIAGHEG--NPILSAYSSTKFAVRGLTQTAAQE 167

Query: 180 IGKHKIRVNGIARGL---HLQDEY----------PIAVGQE---RAVKLVREAAPLHRWL 223
           +    I VN    G+    + +E           PI  G E     + L R + P     
Sbjct: 168 LAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEP----- 222

Query: 224 DVKNDLASTVIYLISDGSRYMTGTTIYVDG 253
               D+A  V +L S+ S Y+TG +I VDG
Sbjct: 223 ---EDVAGLVSFLASEDSDYITGQSILVDG 249

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 90.0 bits (224), Expect = 2e-21
 Identities = 63/261 (24%), Positives = 103/261 (39%), Gaps = 24/261 (9%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K  L+T+    I   IA  LA+ G R+ +   N   L   A ++     GG  V  V  D
Sbjct: 2   KVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASEL---RAGGAGVLAVVAD 58

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           +        D  V+KA    G +D  V+            ++ ++++ +   +  ++   
Sbjct: 59  LT--DPEDIDRLVEKAGDAFGRVDILVN-NAGGPPPGPFAELTDEDWLEAFDLKLLSVIR 115

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAE--RGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
           +++AV   MKE   G  IV ++S+   E    L     A          LV+T + E+  
Sbjct: 116 IVRAVLPGMKERGWG-RIVNISSLTVKEPEPNLVLSNVARAGLIG----LVKTLSRELAP 170

Query: 183 HKIRVNGI---------ARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTV 233
             + VN +          R L         +  E A K V    PL R      +LA+ +
Sbjct: 171 DGVTVNSVLPGYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPLGRVGKP-EELAALI 229

Query: 234 IYLISDGSRYMTGTTIYVDGA 254
            +L S+ + Y+TG  I VDG 
Sbjct: 230 AFLASEKASYITGQAILVDGG 250

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 89.5 bits (223), Expect = 2e-21
 Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 15/250 (6%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           K  L+T     I + IA  LA  G ++ +    R   + AE +      G     +  D+
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTD--RSEEAAAETVEEIKALGGNAAALEADV 58

Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVG--EDEFKKLVKINFVAPW 123
             DRE   +  V+K     G +D  V+     G  +D L +   E+++  ++ +N    +
Sbjct: 59  S-DREAV-EALVEKVEAEFGPVDILVNN---AGITRDNLLMRMSEEDWDAVINVNLTGVF 113

Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 183
            + +AV R M + ++G  I+ ++S++G   G  PG A Y A  A +    ++ A E+   
Sbjct: 114 NVTQAVIRAMIKRRSG-RIINISSVVG-LIG-NPGQANYAASKAGVIGFTKSLAKELASR 170

Query: 184 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
            I VN +A G    D        E+  + + +  PL R L    ++A+ V +L SD + Y
Sbjct: 171 GITVNAVAPGFIDTDM--TDALPEKVKEKILKQIPLGR-LGTPEEVANAVAFLASDDASY 227

Query: 244 MTGTTIYVDG 253
           +TG  ++V+G
Sbjct: 228 ITGQVLHVNG 237

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 93.0 bits (231), Expect = 2e-21
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 22/260 (8%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKM--MGSLKGGQPV 58
            + Q++ VL+T     I +      A+ G ++V+   +R +    E+   +G        
Sbjct: 1   SKAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVA--DRNVERARERADSLGP------- 51

Query: 59  EVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKI 117
           +   L M+   E    E  ++  +  G +D  V+        M   L    +EF +L  I
Sbjct: 52  DHHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAI 111

Query: 118 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAA 177
           N    + + +   R M E   G +IV + S  G    L P   AY A  A++  L R+ A
Sbjct: 112 NLTGAYLVAREALRLMIEQGHGAAIVNVASGAGL-VAL-PKRTAYSASKAAVISLTRSLA 169

Query: 178 MEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL----VREAAPLHRWLDVKNDLASTV 233
            E     IRVN +  G        +    ERA KL    VR   PL R L    ++A  V
Sbjct: 170 CEWAAKGIRVNAVLPG---YVRTQMVAELERAGKLDPSAVRSRIPLGR-LGRPEEIAEAV 225

Query: 234 IYLISDGSRYMTGTTIYVDG 253
            +L SD + Y+TG+T+ VDG
Sbjct: 226 FFLASDQASYITGSTLVVDG 245

Length = 520

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 88.5 bits (220), Expect = 6e-21
 Identities = 60/258 (23%), Positives = 102/258 (39%), Gaps = 26/258 (10%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLV-GNERRLSSVAEKMMGSLKGGQPVEVVG 62
             KR L+T     +    A  LA+ G  +    G       +A  +     GG+    + 
Sbjct: 6   AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAAL--EAAGGR-AHAIA 62

Query: 63  LDM--EEDREGAFDEAVDKACQILGNLDAFVH--CYTYEGKMQDPLQVGEDEFKKLVKIN 118
            D+      +  FD A       LG LD  V+    T      +   +  D +  ++ +N
Sbjct: 63  ADLADPASVQRFFDAAAAA----LGGLDGLVNNAGITNSKSATE---LDIDTWDAVMNVN 115

Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS---IHQLVRT 175
               + +L+A    +++S  G  +   +           GA   GA  AS   +  + R+
Sbjct: 116 VRGTFLMLRAALPHLRDSGRGRIVNLASDTALW------GAPKLGAYVASKGAVIGMTRS 169

Query: 176 AAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY 235
            A E+G   I VN IA GL   +     V  +       +   L R   V +D+A  V++
Sbjct: 170 LARELGGRGITVNAIAPGLTATEAT-AYVPADERHAYYLKGRALERL-QVPDDVAGAVLF 227

Query: 236 LISDGSRYMTGTTIYVDG 253
           L+SD +R++TG  + V+G
Sbjct: 228 LLSDAARFVTGQLLPVNG 245

Length = 250

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 88.0 bits (219), Expect = 7e-21
 Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 16/253 (6%)

Query: 5   AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKG-GQPVEVVGL 63
            +  L+T     + + IA  LA+ G  +V+          AE+++ +++  G+  + V  
Sbjct: 6   GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDE--EAAEELVEAVEALGRRAQAVQA 63

Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVH--CYTYEGKMQDPLQVGEDEFKKLVKINFVA 121
           D+  D+  A + AV  A +  G +D  V+      +  + D   + +DE+ +++ +N   
Sbjct: 64  DVT-DKA-ALEAAVAAAVERFGRIDILVNNAGIFEDKPLAD---MSDDEWDEVIDVNLSG 118

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
            + LL+AV   M++ + GG IV ++S+     G  PG + Y A  A +  L +  A E+ 
Sbjct: 119 VFHLLRAVVPPMRK-QRGGRIVNISSV-AGLPGW-PGRSNYAAAKAGLVGLTKALARELA 175

Query: 182 KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 241
           ++ I VN +A G    D     + + R  K      PL R      D+A  V +L SD S
Sbjct: 176 EYGITVNMVAPGDIDTDMKEATIEEAREAKD--AETPLGR-SGTPEDIARAVAFLCSDAS 232

Query: 242 RYMTGTTIYVDGA 254
            Y+TG  I V G 
Sbjct: 233 DYITGQVIEVTGG 245

Length = 249

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 87.6 bits (218), Expect = 1e-20
 Identities = 77/273 (28%), Positives = 114/273 (41%), Gaps = 47/273 (17%)

Query: 6   KRVLLTSDGDEISKNIAFHLAK----RGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVV 61
           KR+L+T   ++ S  IA+ +AK     G  L        L    EK+   L     V   
Sbjct: 2   KRILITGIANDRS--IAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALVLP- 58

Query: 62  GLDMEEDREGAFDEAVDKAC----QILGNLDAFVHCYTY---EGKMQDPLQVGEDEFKKL 114
             D+      + DE + +      +  G LD  VH   +          L      F K 
Sbjct: 59  -CDV------SNDEEIKELFAEVKKDWGKLDGLVHSIAFAPKVQLKGPFLDTSRKGFLKA 111

Query: 115 VKIN---FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQ 171
           + I+    V+   L KA    M     GGSIV L S +G+ER + PG    G   A++  
Sbjct: 112 LDISAYSLVS---LAKAALPIMNP---GGSIVTL-SYLGSER-VVPGYNVMGVAKAALES 163

Query: 172 LVRTAAMEIGKHKIRVNGIARGLHLQDEYPI------AVGQ-ERAVKLVREAAPLHRWLD 224
            VR  A E+G+  IRVN I+ G       PI       +   ++ ++   + APL R + 
Sbjct: 164 SVRYLAYELGRKGIRVNAISAG-------PIKTLAASGITGFDKMLEYSEQRAPLGRNVT 216

Query: 225 VKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 257
              ++ +T  +L+SD S  +TG  IYVDG   I
Sbjct: 217 A-EEVGNTAAFLLSDLSSGITGEIIYVDGGYHI 248

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 89.9 bits (224), Expect = 2e-20
 Identities = 73/281 (25%), Positives = 109/281 (38%), Gaps = 53/281 (18%)

Query: 8   VLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDME 66
            L+T     I K  A  LA  G  +VL   +E    + A ++      G P   +G+  +
Sbjct: 425 ALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAEL------GGPDRALGVACD 478

Query: 67  EDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVAPWF 124
              E A   A ++A    G +D  V      G        +  ++++++   +N    + 
Sbjct: 479 VTDEAAVQAAFEEAALAFGGVDIVVSN---AGIAISGPIEETSDEDWRRSFDVNATGHFL 535

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG--AAAYGACAASIHQLVRTAAMEIGK 182
           + +   R MK    GGSIVF    I ++  + PG    AYGA  A+   LVR  A+E+G 
Sbjct: 536 VAREAVRIMKAQGLGGSIVF----IASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGP 591

Query: 183 HKIRVNGIA-----RGLHLQDEYPIAVGQERAVK-----------------LVREAAPLH 220
             IRVNG+      RG  +         + RA                   L RE  P  
Sbjct: 592 DGIRVNGVNPDAVVRGSGIWTG---EWIEARAAAYGLSEEELEEFYRARNLLKREVTP-- 646

Query: 221 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG--AQSITR 259
                  D+A  V++L S      TG  I VDG  A +  R
Sbjct: 647 ------EDVAEAVVFLASGLLSKTTGAIITVDGGNAAAFLR 681

Length = 681

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 86.8 bits (215), Expect = 2e-20
 Identities = 68/249 (27%), Positives = 118/249 (47%), Gaps = 18/249 (7%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           KR L+T  G  I +     LAK G R+V V   +  L S+  +  G       +E V +D
Sbjct: 8   KRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPG-------IEPVCVD 60

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           + +       +A ++A   +G +D  V+       +Q  L+V ++ F +   +N  A   
Sbjct: 61  LSDW------DATEEALGSVGPVDLLVNNAAV-AILQPFLEVTKEAFDRSFDVNVRAVIH 113

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           + + V R M      GSIV ++S   ++R L      Y +  A++  L +  A+E+G HK
Sbjct: 114 VSQIVARGMIARGVPGSIVNVSSQA-SQRAL-TNHTVYCSTKAALDMLTKVMALELGPHK 171

Query: 185 IRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
           IRVN +   + + D            K +    PL ++ +V+ D+ + +++L+SD S   
Sbjct: 172 IRVNSVNPTVVMTDMGRDNWSDPEKAKKMLNRIPLGKFAEVE-DVVNAILFLLSDKSSMT 230

Query: 245 TGTTIYVDG 253
           TG+T+ VDG
Sbjct: 231 TGSTLPVDG 239

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 86.7 bits (215), Expect = 3e-20
 Identities = 72/259 (27%), Positives = 120/259 (46%), Gaps = 29/259 (11%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K VL+T     I +  A  LA+RG R+V    N   L  +A +      G +P+    LD
Sbjct: 10  KSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----GCEPLR---LD 61

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           +        D A+  A    G  D  V+C      ++  L +  + F +++ +N      
Sbjct: 62  V------GDDAAIRAALAAAGAFDGLVNCAGI-ASLESALDMTAEGFDRVMAVNARGAAL 114

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           + + V R M  +  GGSIV ++S   A  GL P   AY A  A++  + R   +E+G H 
Sbjct: 115 VARHVARAMIAAGRGGSIVNVSSQ-AALVGL-PDHLAYCASKAALDAITRVLCVELGPHG 172

Query: 185 IRVNGIARGLHLQDEYPIAV-----GQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD 239
           IRVN +   + L    P+A       Q+    L     PL R+ +V +D+A+ +++L+SD
Sbjct: 173 IRVNSVNPTVTLT---PMAAEAWSDPQKSGPMLAA--IPLGRFAEV-DDVAAPILFLLSD 226

Query: 240 GSRYMTGTTIYVDGAQSIT 258
            +  ++G ++ VDG  +  
Sbjct: 227 AASMVSGVSLPVDGGYTAR 245

Length = 245

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 86.3 bits (214), Expect = 4e-20
 Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 19/254 (7%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK--GGQPVEVVG- 62
           K  L+T     I K IA  LA  G  +V+  N R     AE+++  +K  GG+ + V   
Sbjct: 4   KVALVTGASSGIGKAIAIRLATAGANVVV--NYRSKEDAAEEVVEEIKAVGGKAIAVQAD 61

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGE---DEFKKLVKINF 119
           +  EED    F  A+ +     G LD  V+       +Q      E   +++ K++ +N 
Sbjct: 62  VSKEEDVVALFQSAIKE----FGTLDILVN----NAGLQGDASSHEMTLEDWNKVIDVNL 113

Query: 120 VAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME 179
              +   +   +R ++SK  G I+ ++S+   E+  +PG   Y A    +  + +T A E
Sbjct: 114 TGQFLCAREAIKRFRKSKIKGKIINMSSV--HEKIPWPGHVNYAASKGGVKMMTKTLAQE 171

Query: 180 IGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD 239
                IRVN IA G         A         +    P+ R  +   ++A+   +L SD
Sbjct: 172 YAPKGIRVNAIAPGAINTPINAEAWDDPEQRADLLSLIPMGRIGEP-EEIAAAAAWLASD 230

Query: 240 GSRYMTGTTIYVDG 253
            + Y+TGTT++VDG
Sbjct: 231 EASYVTGTTLFVDG 244

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 85.1 bits (211), Expect = 1e-19
 Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 38/268 (14%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLV--GNERRLSSVAEKMMGSLKGGQPVEVVGL 63
           K  ++T     I + IA  LA  G  +VL     E    S  +++  S  G   V  VG 
Sbjct: 3   KVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEI--SEAGYNAV-AVGA 59

Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVH----CYTYEGKMQDPL-QVGEDEFKKLVKIN 118
           D+ +  +   +  +D+A +  G+ D  V+              PL  + E++ KK+  +N
Sbjct: 60  DVTDKDD--VEALIDQAVEKFGSFDVMVNNAGIAPI------TPLLTITEEDLKKVYAVN 111

Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAM 178
                F ++A  R+ K+   GG I+  +SI G +   +P   AY A   ++  L +TAA 
Sbjct: 112 VFGVLFGIQAAARQFKKLGHGGKIINASSIAGVQG--FPNLGAYSASKFAVRGLTQTAAQ 169

Query: 179 EIGKHKIRVNG-------------IARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDV 225
           E+    I VN              I   +      P   G       +    PL R L  
Sbjct: 170 ELAPKGITVNAYAPGIVKTEMWDYIDEEVGEIAGKPEGEGFAEFSSSI----PLGR-LSE 224

Query: 226 KNDLASTVIYLISDGSRYMTGTTIYVDG 253
             D+A  V +L S+ S Y+TG TI VDG
Sbjct: 225 PEDVAGLVSFLASEDSDYITGQTILVDG 252

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 84.4 bits (209), Expect = 2e-19
 Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 19/258 (7%)

Query: 9   LLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM-- 65
           ++T  G  +   IA   A+ G  +++    E +L  VAE++  +   G+   VV  D+  
Sbjct: 14  VVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA---GRRAHVVAADLAH 70

Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDP-LQVGEDEFKKLVKINFVAPWF 124
            E   G   +AV+      G LD  V+     G M +P L     +       N      
Sbjct: 71  PEATAGLAGQAVEA----FGRLDIVVN--NVGGTMPNPLLSTSTKDLADAFTFNVATAHA 124

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           L  A    M E   GGS++ ++S +G   G   G AAYG   A++    R AA+++   +
Sbjct: 125 LTVAAVPLMLEHSGGGSVINISSTMGRLAG--RGFAAYGTAKAALAHYTRLAALDLCP-R 181

Query: 185 IRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
           IRVN IA G  L     +    +     + +A PL R L    D+A+  +YL S    Y+
Sbjct: 182 IRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRR-LGDPEDIAAAAVYLASPAGSYL 240

Query: 245 TGTTIYVDGAQSITRPRM 262
           TG T+ VDG   +T P +
Sbjct: 241 TGKTLEVDGG--LTFPNL 256

Length = 263

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 83.7 bits (207), Expect = 4e-19
 Identities = 76/260 (29%), Positives = 122/260 (46%), Gaps = 14/260 (5%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
           + K VL+T  G  +    A  LAK G +L LV  NE  L +    +   L+     EV+ 
Sbjct: 2   KDKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAAL---LEIAPDAEVLL 58

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
           +  +   E   +  VD   +  G +D F +    EGK       G DEF K+V IN    
Sbjct: 59  IKADVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGV 118

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
           ++ L+ V + M+E  + G IV   S +G  RG+    + Y A    +  L R +A+E G+
Sbjct: 119 FYGLEKVLKVMREQGS-GMIVNTAS-VGGIRGVG-NQSGYAAAKHGVVGLTRNSAVEYGQ 175

Query: 183 HKIRVNGIARGLHLQDEYPIAVGQ------ERAVKLVREAAPLHRWLDVKNDLASTVIYL 236
           + IR+N IA G  L      ++ Q      E A +      P+ R+ + + ++A+ V +L
Sbjct: 176 YGIRINAIAPGAILTPMVEGSLKQLGPENPEEAGEEFVSVNPMKRFGEPE-EVAAVVAFL 234

Query: 237 ISDGSRYMTGTTIYVDGAQS 256
           +SD + Y+    + +DG QS
Sbjct: 235 LSDDAGYVNAAVVPIDGGQS 254

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 82.8 bits (205), Expect = 8e-19
 Identities = 77/270 (28%), Positives = 127/270 (47%), Gaps = 23/270 (8%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLV--GNERRLSSVAEKMMGSLKGGQPVEVV 61
            A+  ++T+    I K  A  LA++G  + +    +E      AE++      G   E+ 
Sbjct: 1   MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH---GVRAEIR 57

Query: 62  GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVA 121
            LD+ +  EGA  +A+DK  Q LG +D  V+           L +  DE++K+  ++   
Sbjct: 58  QLDLSDLPEGA--QALDKLIQRLGRIDVLVNN-AGAMTKAPFLDMDFDEWRKIFTVDVDG 114

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
            +   +   R M +   GG I+ +TS+   E    PGA+AY A   ++  L +  A+E+ 
Sbjct: 115 AFLCSQIAARHMVKQGQGGRIINITSV--HEHTPLPGASAYTAAKHALGGLTKAMALELV 172

Query: 182 KHKIRVNGIARGLHLQDEYPIAV---GQERA-VKLV-REAAPLHRWLDVKNDLASTVIYL 236
           +H I VN +A G        IA    G + + VK   R   PL R  D   ++AS V +L
Sbjct: 173 EHGILVNAVAPG-------AIATPMNGMDDSDVKPDSRPGIPLGRPGDTH-EIASLVAWL 224

Query: 237 ISDGSRYMTGTTIYVDGAQSITRPRMRSYM 266
            S+G+ Y TG ++ VDG   +  P+  S +
Sbjct: 225 CSEGASYTTGQSLIVDGGFMLANPQFNSEL 254

Length = 256

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 82.5 bits (204), Expect = 8e-19
 Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 14/252 (5%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           K  ++T  G  I    A  LA+ G R+V+   +      A+ ++  + GG     + L +
Sbjct: 4   KVAIVTGAGAGIGAACAARLAREGARVVVADIDG---GAAQAVVAQIAGG----ALALRV 56

Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 125
           +   E       ++A +  G LD  V+           +      + + + IN    +  
Sbjct: 57  DVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLC 116

Query: 126 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 185
            +    RM     GGSIV L+SI G  +   PG  AYGA  A+I  L RT A E+    I
Sbjct: 117 CRHAAPRMIAR-GGGSIVNLSSIAG--QSGDPGYGAYGASKAAIRNLTRTLAAELRHAGI 173

Query: 186 RVNGIARGL----HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 241
           R N +A GL     L  +     G             L   L    D+A+ V++L+SD +
Sbjct: 174 RCNALAPGLIDTPLLLAKLAGFEGALGPGGFHLLIHQLQGRLGRPEDVAAAVVFLLSDDA 233

Query: 242 RYMTGTTIYVDG 253
            ++TG  + VDG
Sbjct: 234 SFITGQVLCVDG 245

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 82.2 bits (203), Expect = 9e-19
 Identities = 60/249 (24%), Positives = 107/249 (42%), Gaps = 15/249 (6%)

Query: 8   VLLTSDGDEISKNIAFHLAKRGCRLV---LVGNERRLSSVAEKMMGSLKGGQPVEVVGLD 64
            ++T     I K IA  LAK G  +V   L        + A +  G    G    V    
Sbjct: 2   AIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTS-- 59

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
            E+D E      V +     G +   V+     G     + + E++F+   K+N  + + 
Sbjct: 60  -EQDLEAVVKATVSQ----FGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFR 114

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           L +     M+++  GG+I+ ++S+    +      AAYG+  A+++ + R  A ++G   
Sbjct: 115 LSQLCAPHMQKA-GGGAILNISSMSSENKN--VRIAAYGSSKAAVNHMTRNLAFDLGPKG 171

Query: 185 IRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
           IRVN +A G    D    +V      + + +  PL R L    D+A+  ++L S  S ++
Sbjct: 172 IRVNAVAPGAVKTDALA-SVLTPEIERAMLKHTPLGR-LGEPEDIANAALFLCSPASAWV 229

Query: 245 TGTTIYVDG 253
           +G  + V G
Sbjct: 230 SGQVLTVSG 238

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 81.5 bits (202), Expect = 2e-18
 Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 4/141 (2%)

Query: 113 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 172
           K+V++N +AP  + +A    M++   GGSIV + S+ G  R   PG AAYGA  A +  L
Sbjct: 101 KIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSG--RRPSPGTAAYGAAKAGLLNL 158

Query: 173 VRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAST 232
            R+ A+E    K+RVN +  GL   ++  +  G    +  V    PL R L    D+A  
Sbjct: 159 TRSLAVEWAP-KVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGR-LATPADIAWA 216

Query: 233 VIYLISDGSRYMTGTTIYVDG 253
            ++L SD + Y++G  + V G
Sbjct: 217 CLFLASDLASYVSGANLEVHG 237

Length = 252

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 81.3 bits (201), Expect = 2e-18
 Identities = 75/262 (28%), Positives = 116/262 (44%), Gaps = 30/262 (11%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
             K  ++T     I +  A   AK G R+V+   ++    +VA ++     G   +  V 
Sbjct: 3   DGKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAEL-----GDPDISFVH 57

Query: 63  LDM--EEDREGAFDEAVDKACQILGNLDAFVH----CYTYEGKMQDPLQVGEDEFKKLVK 116
            D+  E D   A D AV +     G LD   +           +   L+   +EF++++ 
Sbjct: 58  CDVTVEADVRAAVDTAVAR----FGRLDIMFNNAGVLGAPCYSI---LETSLEEFERVLD 110

Query: 117 INFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTA 176
           +N    +   K   R M  +K G SIV + S+ G   GL  G  AY A   ++  L R+A
Sbjct: 111 VNVYGAFLGTKHAARVMIPAKKG-SIVSVASVAGVVGGL--GPHAYTASKHAVLGLTRSA 167

Query: 177 AMEIGKHKIRVNGIARGLHLQDEYPIAVG-----QERAVKLVREAAPLHRWLDVKNDLAS 231
           A E+G+H IRVN ++         P+         E   + VR AA L        D+A+
Sbjct: 168 ATELGEHGIRVNCVSPYGVAT---PLLTAGFGVEDEAIEEAVRGAANLKGTALRPEDIAA 224

Query: 232 TVIYLISDGSRYMTGTTIYVDG 253
            V+YL SD SRY++G  + VDG
Sbjct: 225 AVLYLASDDSRYVSGQNLVVDG 246

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 81.2 bits (201), Expect = 3e-18
 Identities = 72/270 (26%), Positives = 113/270 (41%), Gaps = 32/270 (11%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVE 59
           M  Q K  LLT     I + +A      G R+V+      R    A ++      G    
Sbjct: 2   MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI------GPAAI 55

Query: 60  VVGLDMEEDREGAFDEAVDKACQILGNLDAFVH---CYTYEGKMQDPLQVGEDEFKKLVK 116
            V LD+   R+ + D  V  A +  G +D   +    +     M   L +  D + +L  
Sbjct: 56  AVSLDVT--RQDSIDRIVAAAVERFGGIDILFNNAALFD----MAPILDISRDSYDRLFA 109

Query: 117 INFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTA 176
           +N    +FL++AV R M E   GG I+ + S  G  RG     + Y A  A++    ++A
Sbjct: 110 VNVKGLFFLMQAVARHMVEQGRGGKIINMASQAG-RRG-EALVSHYCATKAAVISYTQSA 167

Query: 177 AMEIGKHKIRVNGIARGL-----------HLQDEYPIAVGQERAVKLVREAAPLHRWLDV 225
           A+ + +H I VN IA G+                     G+++  +LV EA PL R + V
Sbjct: 168 ALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKK--RLVGEAVPLGR-MGV 224

Query: 226 KNDLASTVIYLISDGSRYMTGTTIYVDGAQ 255
            +DL    ++L S  + Y+   T  VDG  
Sbjct: 225 PDDLTGMALFLASADADYIVAQTYNVDGGN 254

Length = 257

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 80.7 bits (199), Expect = 5e-18
 Identities = 65/255 (25%), Positives = 116/255 (45%), Gaps = 24/255 (9%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVG--- 62
           K  ++T     + + +A  LAK G  +V VG              + +    VE +G   
Sbjct: 9   KVAIITGCNTGLGQGMAIGLAKAGADIVGVGVA-----------EAPETQAQVEALGRKF 57

Query: 63  --LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKIN 118
             +  +  ++   D  V +A +++G++D  ++     G  + QD L+ G  ++  ++ IN
Sbjct: 58  HFITADLIQQKDIDSIVSQAVEVMGHIDILIN---NAGIIRRQDLLEFGNKDWDDVININ 114

Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAM 178
               +FL +AV ++  +   GG I+ + S++  + G+     +Y A  +++  L R  A 
Sbjct: 115 QKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIR--VPSYTASKSAVMGLTRALAT 172

Query: 179 EIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 238
           E+ ++ I VN IA G    D            + + E  P  RW    +DLA   I+L S
Sbjct: 173 ELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRW-GTPDDLAGPAIFLSS 231

Query: 239 DGSRYMTGTTIYVDG 253
             S Y+TG T+ VDG
Sbjct: 232 SASDYVTGYTLAVDG 246

Length = 251

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 79.8 bits (197), Expect = 7e-18
 Identities = 65/258 (25%), Positives = 113/258 (43%), Gaps = 27/258 (10%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
           Q K V +T     + +  A  LA RG R+ L+G  R  + +++ + G       + + G+
Sbjct: 6   QGKVVAITGGFGGLGRATAAWLAARGARVALIG--RGAAPLSQTLPGVP--ADALRIGGI 61

Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVH---CYTYEGKMQDPLQVGEDEFKKLVKINFV 120
           D+ + +  A   AVD+  +  G LDA V+    + + G + D      D + ++  +N  
Sbjct: 62  DLVDPQ--AARRAVDEVNRQFGRLDALVNIAGAFVW-GTIAD---GDADTWDRMYGVNVK 115

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
                 KA    +  S  GG IV + +    + G  PG  AY A  A + +L    A E+
Sbjct: 116 TTLNASKAALPALTAS-GGGRIVNIGAGAALKAG--PGMGAYAAAKAGVARLTEALAAEL 172

Query: 181 GKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG 240
               I VN +   +       I     RA       A   RW+  +  +A+ + +L+SD 
Sbjct: 173 LDRGITVNAVLPSI-------IDTPPNRADMP---DADFSRWVTPE-QIAAVIAFLLSDE 221

Query: 241 SRYMTGTTIYVDGAQSIT 258
           ++ +TG +I VDG  ++ 
Sbjct: 222 AQAITGASIPVDGGVALP 239

Length = 239

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 80.0 bits (198), Expect = 8e-18
 Identities = 77/272 (28%), Positives = 115/272 (42%), Gaps = 40/272 (14%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAK----RGCRLVLVGNERRLSSVAEKMMGSLKGGQPVE 59
           + KR+L+    +  S  IA+ +AK    +G  L       RL    E++   L  G  + 
Sbjct: 5   EGKRILIMGVANNRS--IAWGIAKALAEQGAELAFTYQGERLEKRVEELAEEL--GSDL- 59

Query: 60  VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ---DPLQVGEDEFKKLVK 116
           V+  D+  D     D       +  G LD  VH   +  K +   D L    + F   + 
Sbjct: 60  VLPCDVTNDES--IDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMD 117

Query: 117 IN---FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLV 173
           I+   F A   L KA    M     GGSI+ LT  +G+ER + P     G   A++   V
Sbjct: 118 ISAYSFTA---LAKAARPLMNN---GGSILTLT-YLGSERVV-PNYNVMGVAKAALEASV 169

Query: 174 RTAAMEIGKHKIRVNGIARGLHLQDEYPIA-------VGQERAVKLVREAAPLHRWLDVK 226
           R  A ++GK  IRVN I+ G       PI            + +K     APL R + ++
Sbjct: 170 RYLAADLGKEGIRVNAISAG-------PIRTLAASGIGDFRKMLKENEANAPLRRNVTIE 222

Query: 227 NDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 258
            ++ +T  +L+SD S  +TG  IYVD    I 
Sbjct: 223 -EVGNTAAFLLSDLSSGITGEIIYVDSGYHIM 253

Length = 259

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 79.3 bits (196), Expect = 1e-17
 Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 19/187 (10%)

Query: 74  DEAVDKACQILGNLDAFVHCYTYEGKMQDP--LQVGEDEFKKLVKINFVAPWFLLKAVGR 131
           ++   +  +  G +D  +      G       L    +++ K++ +N    +   +A  +
Sbjct: 74  EKTFKQIQKDFGKIDILIAN---AGITVHKPALDYTYEQWNKVIDVNLNGVFNCAQAAAK 130

Query: 132 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 191
             K+   G S++   S+ G         AAY A  A++  L ++ A+E  K+ IRVN I+
Sbjct: 131 IFKKQGKG-SLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEWAKYFIRVNSIS 189

Query: 192 RGLHLQD-----EYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
            G    D     +  +    E  + L R A P         +L    +YL SD S Y TG
Sbjct: 190 PGYIDTDLTDFVDKELRKKWESYIPLKRIALP--------EELVGAYLYLASDASSYTTG 241

Query: 247 TTIYVDG 253
           + + +DG
Sbjct: 242 SDLIIDG 248

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 79.3 bits (196), Expect = 1e-17
 Identities = 59/262 (22%), Positives = 105/262 (40%), Gaps = 25/262 (9%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
           + K +L+T     I K     L   G RL+L   N   L  + E++  +      V  + 
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEEL--TNLYKNRVIALE 58

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQD-PL-QVGEDEFKKLVKINFV 120
           LD+         E ++   +  G +D  ++      K+      +   +++ +++ +N  
Sbjct: 59  LDITSKES--IKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLG 116

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSI---IGAERGLYPGA-----AAYGACAASIHQL 172
             +   +A  +  K+    GSI+ + SI   I  +  +Y          Y    A I  L
Sbjct: 117 GAFLCSQAFIKLFKKQG-KGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHL 175

Query: 173 VRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERA-VKLVREAAPLHRWLDVKNDLAS 231
            +  A       IRVN I+ G        I   Q    ++   +  PL R L+ + DL  
Sbjct: 176 TKYLAKYYADTGIRVNAISPG-------GILNNQPSEFLEKYTKKCPLKRMLNPE-DLRG 227

Query: 232 TVIYLISDGSRYMTGTTIYVDG 253
            +I+L+SD S Y+TG  + +DG
Sbjct: 228 AIIFLLSDASSYVTGQNLVIDG 249

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 80.7 bits (199), Expect = 3e-17
 Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 16/251 (6%)

Query: 5   AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLD 64
            + V +T     I + +A   A  G RL+++    R +  A+K+  +L          + 
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLII---DRDAEGAKKLAEALGDEHLSVQADIT 325

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
            E   E AF +   +     G LD  V+        +  L+   ++F ++  +N    + 
Sbjct: 326 DEAAVESAFAQIQAR----WGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFA 381

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
             +A  R M +   GG IV L SI        P   AY A  A++  L R+ A E     
Sbjct: 382 CARAAARLMSQ---GGVIVNLGSIASL--LALPPRNAYCASKAAVTMLSRSLACEWAPAG 436

Query: 185 IRVNGIARGLHLQDEYPIAVGQ--ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 242
           IRVN +A G +++    +A+          +R   PL R L    ++A  + +L S  + 
Sbjct: 437 IRVNTVAPG-YIETPAVLALKASGRADFDSIRRRIPLGR-LGDPEEVAEAIAFLASPAAS 494

Query: 243 YMTGTTIYVDG 253
           Y+ G T+ VDG
Sbjct: 495 YVNGATLTVDG 505

Length = 520

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 78.6 bits (194), Expect = 3e-17
 Identities = 62/264 (23%), Positives = 110/264 (41%), Gaps = 31/264 (11%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           K  L+T     I   IA  LA  G  +V+       +  A K+ G   G     V+ L  
Sbjct: 2   KTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGG----SVIYLPA 57

Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ--DPLQ-VGEDEFKKLVKINFVAP 122
           +  +E    + +  A    G LD  V+       +Q   P++    +++ +++ +   + 
Sbjct: 58  DVTKEDEIADMIAAAAAEFGGLDILVN----NAGIQHVAPIEEFPPEDWDRIIAVMLTSA 113

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
           +  ++A    MK+ +  G I+ + S  G      P  +AY A    +  L +  A+E+ +
Sbjct: 114 FHTIRAALPHMKK-QGWGRIINIASAHGLVA--SPFKSAYVAAKHGLIGLTKVLALEVAE 170

Query: 183 HKIRVNGIARGLHLQDEYPIAVGQ-----------ERAV--KLVREAAPLHRWLDVKNDL 229
           H I VN I  G       P+   Q           E  V  +++ +  P  R++ V  ++
Sbjct: 171 HGITVNAICPGYVRT---PLVEKQIADQAKTRGIPEEQVIREVMLKGQPTKRFVTVD-EV 226

Query: 230 ASTVIYLISDGSRYMTGTTIYVDG 253
           A T +YL SD +  +TG  I +DG
Sbjct: 227 AETALYLASDAAAQITGQAIVLDG 250

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 78.0 bits (193), Expect = 5e-17
 Identities = 64/240 (26%), Positives = 107/240 (44%), Gaps = 11/240 (4%)

Query: 22  AFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA 80
           A   A+ G ++V+    +  L  +  ++     GG+ V + G D+ +  E      V  A
Sbjct: 23  AKLFAREGAKVVVGARRQAELDQLVAEIRAE--GGEAVALAG-DVRD--EAYAKALVALA 77

Query: 81  CQILGNLD-AFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAG 139
            +  G LD AF +  T  G+M    ++  + +++ +  N  + +   K     M   + G
Sbjct: 78  VERFGGLDIAFNNAGTL-GEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLA-RGG 135

Query: 140 GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDE 199
           GS++F ++ +G   G  PG AAY A  A +  L +  A E G   IRVN +  G      
Sbjct: 136 GSLIFTSTFVGHTAGF-PGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPM 194

Query: 200 YPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 259
                    A+  V     L R +    ++A   ++L SD + ++TGT + VDG  SITR
Sbjct: 195 GRAMGDTPEALAFVAGLHALKR-MAQPEEIAQAALFLASDAASFVTGTALLVDGGVSITR 253

Length = 254

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 77.8 bits (192), Expect = 5e-17
 Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 10/255 (3%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKG-GQPVEVVG 62
             K  L+T     I K IA  LA+ G  + +  N  R    AE+    ++  G+    V 
Sbjct: 3   SGKVALVTGSSRGIGKAIALRLAEEGYDIAV--NYARSRKAAEETAEEIEALGRKALAVK 60

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
            ++  D E    E   +  +  G LD FV+     G ++  +++ E  +   + IN  A 
Sbjct: 61  ANVG-DVE-KIKEMFAQIDEEFGRLDVFVN-NAASGVLRPAMELEESHWDWTMNINAKAL 117

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
            F  +   + M E   GG I+ L+S+ G+ R L       G   A++  L R  A+E+  
Sbjct: 118 LFCAQEAAKLM-EKVGGGKIISLSSL-GSIRYL-ENYTTVGVSKAALEALTRYLAVELAP 174

Query: 183 HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 242
             I VN ++ G    D       +E  ++  R   P  R ++ + D+A+ V++L S  + 
Sbjct: 175 KGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPE-DVANAVLFLCSPEAD 233

Query: 243 YMTGTTIYVDGAQSI 257
            + G TI VDG +S+
Sbjct: 234 MIRGQTIIVDGGRSL 248

Length = 250

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 77.6 bits (192), Expect = 5e-17
 Identities = 69/263 (26%), Positives = 112/263 (42%), Gaps = 40/263 (15%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG--NERRLSSVAEKMMGSLKGGQPVEVVG- 62
           K  ++T     I + IA  LAK G ++V+    NE     + E  +   +GG  + V   
Sbjct: 6   KVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLE-EIKE-EGGDAIAVKAD 63

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFV 120
           +  EED E   ++ V+K     G +D  V+     G     L   + ++E+ +++ +N  
Sbjct: 64  VSSEEDVENLVEQIVEK----FGKIDILVN---NAGISNFGLVTDMTDEEWDRVIDVNLT 116

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA---AAYGACAASIHQLVRTAA 177
               L +     M + K  G IV ++SI     GL  GA     Y A   +++   +  A
Sbjct: 117 GVMLLTRYALPYMIKRK-SGVIVNISSI----WGLI-GASCEVLYSASKGAVNAFTKALA 170

Query: 178 MEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL-------VREAAPLHRWLDVKNDLA 230
            E+    IRVN +A G         A+  E            + E  PL R    + ++A
Sbjct: 171 KELAPSGIRVNAVAPG---------AIDTEMWSSFSEEDKEGLAEEIPLGRLGKPE-EIA 220

Query: 231 STVIYLISDGSRYMTGTTIYVDG 253
             V++L SD + Y+TG  I VDG
Sbjct: 221 KVVLFLASDDASYITGQIITVDG 243

Length = 247

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 76.5 bits (189), Expect = 2e-16
 Identities = 65/267 (24%), Positives = 114/267 (42%), Gaps = 33/267 (12%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
           + K  L+T     I   IA  LAK G ++V+   N+   ++ AE +     GG+    +G
Sbjct: 3   KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQK--AGGK---AIG 57

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ--DPLQ-VGEDEFKKLVKINF 119
           + M+   E A +  +D A +  G +D  V+       +Q   P++    +++KK++ I  
Sbjct: 58  VAMDVTDEEAINAGIDYAVETFGGVDILVN----NAGIQHVAPIEDFPTEKWKKMIAIML 113

Query: 120 VAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME 179
              +   KA    MK    GG I+ + S+ G       G AAY +    +  L +  A+E
Sbjct: 114 DGAFLTTKAALPIMKAQG-GGRIINMASVHGLVG--SAGKAAYVSAKHGLIGLTKVVALE 170

Query: 180 IGKHKIRVNGIARGLHLQDEYPIAVGQ------------ERAVK-LVREAAPLHRWLDVK 226
              H + VN I  G       P+   Q            E  ++ ++    P  R+  V+
Sbjct: 171 GATHGVTVNAICPGYVDT---PLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVE 227

Query: 227 NDLASTVIYLISDGSRYMTGTTIYVDG 253
            ++A   ++L S  ++ +TG    VDG
Sbjct: 228 -EIADYALFLASFAAKGVTGQAWVVDG 253

Length = 258

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 76.0 bits (187), Expect = 2e-16
 Identities = 64/247 (25%), Positives = 112/247 (45%), Gaps = 15/247 (6%)

Query: 9   LLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEV-VGLDME 66
           ++T  G  I K IA   A  G  +V+   N    + V +++     GGQ       +  E
Sbjct: 15  IITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEI--QQLGGQAFACRCDITSE 72

Query: 67  EDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLL 126
           ++     D A+ K    LG +D  V+     G    P  +   +F++  ++N  + + L 
Sbjct: 73  QELSALADFALSK----LGKVDILVN--NAGGGGPKPFDMPMADFRRAYELNVFSFFHLS 126

Query: 127 KAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIR 186
           + V   M E   GG I+ +TS+    + +     +Y +  A+   LVR  A ++G+  IR
Sbjct: 127 QLVAPEM-EKNGGGVILTITSMAAENKNI--NMTSYASSKAAASHLVRNMAFDLGEKNIR 183

Query: 187 VNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
           VNGIA G  L D     +  E   K+++   P+ R L    D+A+  ++L S  + +++G
Sbjct: 184 VNGIAPGAILTDALKSVITPEIEQKMLQH-TPIRR-LGQPQDIANAALFLCSPAASWVSG 241

Query: 247 TTIYVDG 253
             + V G
Sbjct: 242 QILTVSG 248

Length = 255

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 75.2 bits (185), Expect = 3e-16
 Identities = 63/260 (24%), Positives = 117/260 (45%), Gaps = 25/260 (9%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
             K  L+T+    I + IA   A+ G  ++        + + E+ +  L+ G  +    L
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIA-------TDINEEKLKELERGPGITTRVL 53

Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVA 121
           D+ +       E V    +  G +D   +C  + + G +   L   +D++   + +N  +
Sbjct: 54  DVTDK------EQVAALAKEEGRIDVLFNCAGFVHHGSI---LDCEDDDWDFAMNLNVRS 104

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
            + ++KAV  +M   K  GSI+ ++S+  + +G+ P    Y    A++  L ++ A +  
Sbjct: 105 MYLMIKAVLPKMLARK-DGSIINMSSVASSIKGV-PNRFVYSTTKAAVIGLTKSVAADFA 162

Query: 182 KHKIRVNGIARGL----HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI 237
           +  IR N I  G      L++        E A+K      PL R L    ++A+  +YL 
Sbjct: 163 QQGIRCNAICPGTVDTPSLEERIQAQPDPEEALKAFAARQPLGR-LATPEEVAALAVYLA 221

Query: 238 SDGSRYMTGTTIYVDGAQSI 257
           SD S Y+TGT + +DG  S+
Sbjct: 222 SDESAYVTGTAVVIDGGWSL 241

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 75.7 bits (186), Expect = 4e-16
 Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 7/155 (4%)

Query: 108 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAG--GSIVFLTSIIGAERGL-YPGAAAYGA 164
           E +  +L   N +AP+FL+KA  +R   ++A    + + + ++  A       G   Y  
Sbjct: 116 EVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTM 175

Query: 165 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLD 224
              ++  L R+AA+E+   +IRVNG+A GL L    P A+  E      R   PL +   
Sbjct: 176 AKHALEGLTRSAALELAPLQIRVNGVAPGLSL---LPDAMPFEVQEDY-RRKVPLGQREA 231

Query: 225 VKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 259
               +A  VI+L+S  ++Y+TGT I VDG  S+TR
Sbjct: 232 SAEQIADVVIFLVSPKAKYITGTCIKVDGGLSLTR 266

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 75.1 bits (185), Expect = 4e-16
 Identities = 73/256 (28%), Positives = 111/256 (43%), Gaps = 32/256 (12%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFD 74
           I+  IA  L   G +LV      RL     ++  +L+G + + ++  D+  +E+    F+
Sbjct: 21  IAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESL-LLPCDVTSDEEITACFE 79

Query: 75  EAVDKACQILGNLDAFVHCYTYEGKMQ---DPLQVGEDEFKKLVKINFVAPWFLLKAVGR 131
              ++     G +    HC  +  K     + L+   D F  L+  N  A  + L AV R
Sbjct: 80  TIKEEV----GVIHGVAHCIAFANKEDLRGEFLETSRDGF--LLAQNISA--YSLTAVAR 131

Query: 132 RMKE-SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 190
             K+    GGSIV LT  +G ER +       G   AS+   V+  A ++GK  IRVN I
Sbjct: 132 EAKKLMTEGGSIVTLT-YLGGERVV-QNYNVMGVAKASLEASVKYLANDLGKDGIRVNAI 189

Query: 191 ARGLHLQDEYPIAVGQERAV-------KLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
           + G       PI     + V       K + E APL R    + ++  T  +L SD SR 
Sbjct: 190 SAG-------PIRTLSAKGVGGFNSILKEIEERAPLRRTTT-QEEVGDTAAFLFSDLSRG 241

Query: 244 MTGTTIYVDGAQSITR 259
           +TG  I+VD    I  
Sbjct: 242 VTGENIHVDSGYHIIG 257

Length = 257

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 74.9 bits (184), Expect = 7e-16
 Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 16/254 (6%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVG- 62
             K  L+T+  D I   IA  LA+ G  +V+  + R+  +V ++ + +L+G + + V G 
Sbjct: 9   ANKVALVTASTDGIGLAIARRLAQDGAHVVV--SSRKQQNV-DRAVATLQG-EGLSVTGT 64

Query: 63  ---LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINF 119
              +   EDRE      V  A  + G +D  V          + L   E+ + K++ +N 
Sbjct: 65  VCHVGKAEDRE----RLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNV 120

Query: 120 VAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME 179
            A   + KAV   M E + GGS+V ++S+       +PG   Y     ++  L +  A E
Sbjct: 121 KATALMTKAVVPEM-EKRGGGSVVIVSSVAAFHP--FPGLGPYNVSKTALLGLTKNLAPE 177

Query: 180 IGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD 239
           +    IRVN +A GL ++  +  A+  ++AV+   +     R L    D A  V +L S+
Sbjct: 178 LAPRNIRVNCLAPGL-IKTSFSSALWMDKAVEESMKETLRIRRLGQPEDCAGIVSFLCSE 236

Query: 240 GSRYMTGTTIYVDG 253
            + Y+TG T+ V G
Sbjct: 237 DASYITGETVVVGG 250

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 74.3 bits (183), Expect = 7e-16
 Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 19/154 (12%)

Query: 109 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 168
           +E+++L+ IN    +   +AV   MKE+  GGSI+ ++SI G   G  P  AAY A   +
Sbjct: 101 EEWRRLLDINLTGVFLGTRAVIPPMKEA-GGGSIINMSSIEGL-VGD-PALAAYNASKGA 157

Query: 169 IHQLVRTAAMEIGKHK--IRVNGIARGL---HLQDEYPIA---VGQERAVKLVREAAPLH 220
           +  L ++AA+E       IRVN +  G     + DE  IA   +G      + R   P  
Sbjct: 158 VRGLTKSAALECATQGYGIRVNSVHPGYIYTPMTDELLIAQGEMGNYPNTPMGRAGEP-- 215

Query: 221 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 254
                 +++A  V+YL SD S ++TG+ + VDG 
Sbjct: 216 ------DEIAYAVVYLASDESSFVTGSELVVDGG 243

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 74.3 bits (183), Expect = 1e-15
 Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 29/206 (14%)

Query: 74  DEAVDKACQILGNLDAFVHC-------YTYEGKMQDP-LQVGEDEFKKLVKINFVAPWFL 125
           +  V +  +  G +D  V+           + K      ++ E  F K+  IN    + +
Sbjct: 65  NHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLM 124

Query: 126 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 185
            +AV R+M   +  G IV ++S  G E     G + Y A  A+++   R+ A E+GKH I
Sbjct: 125 SQAVARQM-VKQHDGVIVNMSSEAGLEGSE--GQSCYAATKAALNSFTRSWAKELGKHNI 181

Query: 186 RVNGIARGL-------HLQDEYPIAVGQERAVKLVRE------AAPLHRW--LDVKNDLA 230
           RV G+A G+         + E  +A  +   V+ +R         PL R   L    ++A
Sbjct: 182 RVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLS---EVA 238

Query: 231 STVIYLISDGSRYMTGTTIYVDGAQS 256
             V YL+SD + Y+TG T  + G ++
Sbjct: 239 DLVCYLLSDRASYITGVTTNIAGGKT 264

Length = 266

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 74.1 bits (182), Expect = 1e-15
 Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 9/155 (5%)

Query: 105 QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA 164
           ++ E+++  ++ IN    W   KAV   M E   GGSI+  +S+ G  + L PG A Y A
Sbjct: 111 ELSEEQWDTVLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGL-KAL-PGLAHYAA 168

Query: 165 CAASIHQLVRTAAMEIGKHKIRVNGI------ARGLHLQDEYPIAVGQERAVKLVREAAP 218
               +  L +T A E+ ++ IRVN I         +  +      +    A +    A P
Sbjct: 169 AKHGLVGLTKTLANELAEYGIRVNSIHPYSVDTPMIAPEAMREAFLKYPEAARAFMPALP 228

Query: 219 LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 253
           +  ++  + D+A  V++L SD SRY+TG  + VD 
Sbjct: 229 VSGFVPPE-DVADAVLWLASDESRYITGHQLPVDA 262

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 73.7 bits (181), Expect = 2e-15
 Identities = 81/276 (29%), Positives = 120/276 (43%), Gaps = 31/276 (11%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           K  L+T     I ++I     K G ++ +V  +  L    + +  SL G   V     D+
Sbjct: 19  KVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDL---GQNVCDSLGGEPNVCFFHCDV 75

Query: 66  --EEDREGAFDEAVDKACQILGNLDAFVHCYTYEG-KMQDPLQVGEDEFKKLVKINFVAP 122
             E+D   A D  VDK     G LD  V+     G    D   V   EF+K+  +N    
Sbjct: 76  TVEDDVSRAVDFTVDK----FGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGV 131

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
           +  +K   R M   K G SIV L S+  A  GL  G  AY     ++  L R+ A E+GK
Sbjct: 132 FLGMKHAARIMIPLKKG-SIVSLCSVASAIGGL--GPHAYTGSKHAVLGLTRSVAAELGK 188

Query: 183 HKIRVN-----GIARGL---HL-QDEYPIAVGQERAVK----LVREAAPLHRWLDVKNDL 229
           H IRVN      +   L   HL +DE       E A+        + A L       +D+
Sbjct: 189 HGIRVNCVSPYAVPTALALAHLPEDER-----TEDALAGFRAFAGKNANLKGVELTVDDV 243

Query: 230 ASTVIYLISDGSRYMTGTTIYVDGAQSITRPRMRSY 265
           A+ V++L SD +RY++G  + +DG  + T   +R +
Sbjct: 244 ANAVLFLASDEARYISGLNLMIDGGFTCTNHSLRVF 279

Length = 280

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 73.1 bits (180), Expect = 3e-15
 Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 6/151 (3%)

Query: 104 LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG 163
           L      F+K V +N    +F+    G+ MKE   GGSIV + S+ G   G + G   Y 
Sbjct: 103 LDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGVSPGDFQGI--YS 159

Query: 164 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV-KLVREAAPLHRW 222
              A++  + +  A E     IRVN +  GL    ++  A+ +  A+ K      PL R 
Sbjct: 160 ITKAAVISMTKAFAKECAPFGIRVNALLPGL-TDTKFASALFKNDAILKQALAHIPLRR- 217

Query: 223 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 253
               +++A  V+YL SD S Y TG  + VDG
Sbjct: 218 HAEPSEMAGAVLYLASDASSYTTGECLNVDG 248

Length = 252

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 72.9 bits (179), Expect = 3e-15
 Identities = 59/253 (23%), Positives = 108/253 (42%), Gaps = 16/253 (6%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
           + K  L+T     + + IA  LA+ G  +V  G     S  +E        G+    +  
Sbjct: 4   EGKVALVTGANTGLGQGIAVGLAEAGADIVGAG----RSEPSETQQQVEALGRRFLSLTA 59

Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVA 121
           D+ +    A    VD A +  G++D  V+     G  +  D  +  E ++  ++ +N  +
Sbjct: 60  DLSD--IEAIKALVDSAVEEFGHIDILVN---NAGIIRRADAEEFSEKDWDDVMNVNLKS 114

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
            +FL +A  +   +   GG I+ + S++  + G+     +Y A   ++  L +  A E  
Sbjct: 115 VFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIR--VPSYTASKHAVAGLTKLLANEWA 172

Query: 182 KHKIRVNGIARG-LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG 240
              I VN IA G +   +   +   ++R    + E  P  RW    +D+    ++L S  
Sbjct: 173 AKGINVNAIAPGYMATNNTQALRADEDRN-AAILERIPAGRW-GTPDDIGGPAVFLASSA 230

Query: 241 SRYMTGTTIYVDG 253
           S Y+ G T+ VDG
Sbjct: 231 SDYVNGYTLAVDG 243

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 72.5 bits (178), Expect = 4e-15
 Identities = 64/263 (24%), Positives = 108/263 (41%), Gaps = 18/263 (6%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEV 60
           M    +  ++T  G  I +  A   A+ G R+V+     R +  AE++  ++  G     
Sbjct: 1   MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVAD---RDAEAAERVAAAIAAGGRAFA 57

Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKIN 118
              D+      A +  VD      G LD  V+   +   G +       E ++  ++++N
Sbjct: 58  RQGDVGS--AEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVT---TDEADWDAVMRVN 112

Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAM 178
               +   K     M+    GGSIV   S +    G   G AAY A   +I  L R  A+
Sbjct: 113 VGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALAGG--RGRAAYVASKGAIASLTRAMAL 169

Query: 179 EIGKHKIRVNGIARGL----HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI 234
           +     IRVN +A G     + +  +      E   + +R   P++R+     ++A   +
Sbjct: 170 DHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRF-GTAEEVAQAAL 228

Query: 235 YLISDGSRYMTGTTIYVDGAQSI 257
           +L SD S + TGTT+ VDG    
Sbjct: 229 FLASDESSFATGTTLVVDGGWLA 251

Length = 252

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 72.1 bits (177), Expect = 5e-15
 Identities = 71/251 (28%), Positives = 103/251 (41%), Gaps = 17/251 (6%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEE--DREGAFD 74
           I + IA  LA RG  + +           E +   L  G+       D+ E  D E    
Sbjct: 13  IGRAIATELAARGFDIAINDL-PDDDQATEVVAEVLAAGRRAIYFQADIGELSDHE---- 67

Query: 75  EAVDKACQILGNLDAFVHCYTYEGKMQ-DPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 133
             +D+A +  G LD  V+      + + D L + ED F +L+ IN   P+FL +AV RRM
Sbjct: 68  ALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLTQAVARRM 127

Query: 134 KE---SKAG--GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVN 188
            E      G   SI+F+TSI      + P    Y    A +    R  A  +    I V+
Sbjct: 128 VEQPDRFDGPHRSIIFVTSI--NAYLVSPNRGEYCISKAGLSMATRLLAYRLADEGIAVH 185

Query: 189 GIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTT 248
            I  GL +  +    V ++    +     P+ RW     D+A  V  L S    Y TG  
Sbjct: 186 EIRPGL-IHTDMTAPVKEKYDELIAAGLVPIRRW-GQPEDIAKAVRTLASGLLPYSTGQP 243

Query: 249 IYVDGAQSITR 259
           I +DG  S+ R
Sbjct: 244 INIDGGLSMRR 254

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 72.0 bits (177), Expect = 6e-15
 Identities = 71/252 (28%), Positives = 109/252 (43%), Gaps = 28/252 (11%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDE 75
           I   +A  L   G R+ +V  +    ++VA  +      G+    +  D+ +D   A + 
Sbjct: 18  IGAAVARALVAAGARVAIVDIDADNGAAVAASL------GERARFIATDITDDA--AIER 69

Query: 76  AVDKACQILGNLDAFVHCY-TYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 134
           AV       G +D  V+   TY   + D L     ++   + +N V+   L +A    + 
Sbjct: 70  AVATVVARFGRVDILVNLACTY---LDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLA 126

Query: 135 ESKAGGSIVFLTSIIG----AERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 190
             + GG+IV  TSI        R LYP      A  A+I QL R+ AM++    IRVN +
Sbjct: 127 --RGGGAIVNFTSISAKFAQTGRWLYP------ASKAAIRQLTRSMAMDLAPDGIRVNSV 178

Query: 191 ARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKN--DLASTVIYLISDGSRYMTGTT 248
           + G           G +RA K  R AAP H    V +  ++A  V +L SD + ++TG  
Sbjct: 179 SPGWTWSRVMDELSGGDRA-KADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVTGAD 237

Query: 249 IYVDGAQSITRP 260
             VDG  S   P
Sbjct: 238 YAVDGGYSALGP 249

Length = 261

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 71.9 bits (177), Expect = 7e-15
 Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 13/155 (8%)

Query: 109 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG---AAAYGAC 165
           + + K++ +N    + L +AV +R    +  G I+ + S+ G   G  P      AY   
Sbjct: 111 EAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGL-GGNPPEVMDTIAYNTS 169

Query: 166 AASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYP---IAVGQERAVKLVREAAPLHRW 222
             ++    R  A E G H IRVN IA G      +P        ER  + +    PL R 
Sbjct: 170 KGAVINFTRALAAEWGPHGIRVNAIAPGF-----FPTKMTRGTLERLGEDLLAHTPLGR- 223

Query: 223 LDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 257
           L    DL    + L SD S+++TG  + VDG  S 
Sbjct: 224 LGDDEDLKGAALLLASDASKHITGQILAVDGGVSA 258

Length = 259

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 71.3 bits (175), Expect = 1e-14
 Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 24/260 (9%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
           + K VL+      +   IA  LA +G + V +  N     + AE+ + ++K     + V 
Sbjct: 7   KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKA-AGAKAVA 65

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK-MQDP-LQVGEDEFKKLVKINFV 120
              +     A ++  D A    G  D  ++     GK ++ P +++ E E+ ++  +N  
Sbjct: 66  FQADLTTAAAVEKLFDDAKAAFGRPDIAINTV---GKVLKKPIVEISEAEYDEMFAVNSK 122

Query: 121 APWFLLKAVGRRMKESKAGGSIVFL-TSIIGAERGLYPGAAAYGACAASIHQLVRTAAME 179
           + +F +K  GR + +    G IV L TS++GA    Y   +AY    A +    R A+ E
Sbjct: 123 SAFFFIKEAGRHLND---NGKIVTLVTSLLGAFTPFY---SAYAGSKAPVEHFTRAASKE 176

Query: 180 IGKHKIRVNGIARGLHLQDEYPIAVGQE--RAVKLVREAAPLHRWLDVK----NDLASTV 233
            G   I V  +  G     + P    QE   AV   + AA L  +         D+   +
Sbjct: 177 FGARGISVTAVGPG---PMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFI 233

Query: 234 IYLISDGSRYMTGTTIYVDG 253
            +L++DG  ++TG TI ++G
Sbjct: 234 RFLVTDG-WWITGQTILING 252

Length = 257

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 71.1 bits (175), Expect = 1e-14
 Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 21/264 (7%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEV 60
           M + AK  L+T     I   IA  L   G R+ +  +  R ++ A+ +   L   +P   
Sbjct: 2   MTDSAKVALITGGARRIGAAIARTLHAAGYRVAI--HYHRSAAEADALAAELNALRPGSA 59

Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVH-CYTYEGKMQDPL-QVGEDEFKKLVKIN 118
             L  +     A  E V       G LDA V+   ++      PL  + E ++  L   N
Sbjct: 60  AALQADLLDPDALPELVAACVAAFGRLDALVNNASSF---YPTPLGSITEAQWDDLFASN 116

Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAM 178
             AP+FL +A   +++  K  G+IV +T I  AER L  G   Y A  A++  L R+ A+
Sbjct: 117 LKAPFFLSQAAAPQLR--KQRGAIVNITDI-HAERPL-KGYPVYCAAKAALEMLTRSLAL 172

Query: 179 EIGKHKIRVNGIARGLHL---QDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY 235
           E+    +RVN +A G  L            ++  +       PL R    + D+A  V +
Sbjct: 173 ELAPE-VRVNAVAPGAILWPEDGNSFDEEARQAILART----PLKRIGTPE-DIAEAVRF 226

Query: 236 LISDGSRYMTGTTIYVDGAQSITR 259
           L++D S ++TG  + VDG +S+T 
Sbjct: 227 LLADAS-FITGQILAVDGGRSLTL 249

Length = 249

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 71.6 bits (176), Expect = 1e-14
 Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 23/191 (12%)

Query: 75  EAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 134
           + V +  +  G LD  V+   Y+   +    +  ++ +K  + N  + ++L KA    +K
Sbjct: 94  DLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFSMFYLTKAALPHLK 153

Query: 135 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL 194
           +   G SI+  TS+  A +G  P    Y A   +I    R  ++++ +  IRVN +A G 
Sbjct: 154 K---GSSIINTTSVT-AYKG-SPHLLDYAATKGAIVAFTRGLSLQLAEKGIRVNAVAPGP 208

Query: 195 --------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
                      +E     G +  V + R   P         ++A   ++L S  S Y+TG
Sbjct: 209 IWTPLIPSSFPEEKVSEFGSQ--VPMGRAGQPA--------EVAPAYVFLASQDSSYVTG 258

Query: 247 TTIYVDGAQSI 257
             ++V+G + I
Sbjct: 259 QVLHVNGGEII 269

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 71.1 bits (175), Expect = 1e-14
 Identities = 56/177 (31%), Positives = 81/177 (45%), Gaps = 26/177 (14%)

Query: 4   QAKRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEV 60
           Q K V++T  S G  I + +A+HLA+ G RLVL    E RL  V  + +    G     V
Sbjct: 2   QGKVVIITGASSG--IGEELAYHLARLGARLVLSARREERLEEVKSECLE--LGAPSPHV 57

Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFV--HCYTYEGKMQDPLQVGEDEFKKLVKIN 118
           V LDM        ++ V++A ++ G LD  +     +      D      D  +K++++N
Sbjct: 58  VPLDMS--DLEDAEQVVEEALKLFGGLDILINNAGISMRSLFHD---TSIDVDRKIMEVN 112

Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSI---IGAERGLYPGAAAYGACAASIHQL 172
           +  P  L KA    + E    GSIV ++SI   IG      P   AY   AAS H L
Sbjct: 113 YFGPVALTKAALPHLIERS-QGSIVVVSSIAGKIGV-----PFRTAY---AASKHAL 160

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 70.8 bits (174), Expect = 2e-14
 Identities = 79/273 (28%), Positives = 118/273 (43%), Gaps = 40/273 (14%)

Query: 3   NQAKRVLLTSDGDEISKNIAFHLAKRGCR-LVLVGNERRLSSVAEKMMGSL-KGGQPVEV 60
              K  L+T     +   IA   A+RG   LV+ G   R +   E     L   G     
Sbjct: 4   LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICG---RNAEKGEAQAAELEALGAKAVF 60

Query: 61  VGLDME--EDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVK 116
           V  D+   ED       A +      G LDA V+    T  G +   L    + F +   
Sbjct: 61  VQADLSDVEDCRRVVAAADEA----FGRLDALVNAAGLTDRGTI---LDTSPELFDRHFA 113

Query: 117 INFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTA 176
           +N  AP+FL++   + M+  KA G+IV + S+  +  G  P  AAY A   ++  L R A
Sbjct: 114 VNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSM--SAHGGQPFLAAYCASKGALATLTRNA 171

Query: 177 AMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK----------LVREAA--PLHRWLD 224
           A  + +++IRVNG+  G        +A   E  ++          L + AA  P  R LD
Sbjct: 172 AYALLRNRIRVNGLNIGW-------MATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLD 224

Query: 225 VKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 257
             +++A  V +L+SD S  MTG+ I  D  QS+
Sbjct: 225 P-DEVARAVAFLLSDESGLMTGSVIDFD--QSV 254

Length = 260

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 70.6 bits (173), Expect = 2e-14
 Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 4/146 (2%)

Query: 108 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 167
           E+++  ++  NF A + L +     +K S  G +IVF++S+ G      P  A YGA   
Sbjct: 105 EEDYSLIMSTNFEAAYHLSRLAHPLLKASGNG-NIVFISSVAGVIA--VPSGAPYGATKG 161

Query: 168 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKN 227
           +++QL R+ A E  K  IRVN +A  +         + Q+  +  V E  PL R+ + + 
Sbjct: 162 ALNQLTRSLACEWAKDNIRVNAVAPWVIATPLVEPVIQQKENLDKVIERTPLKRFGEPE- 220

Query: 228 DLASTVIYLISDGSRYMTGTTIYVDG 253
           ++A+ V +L    + Y+TG  I VDG
Sbjct: 221 EVAALVAFLCMPAASYITGQIIAVDG 246

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 70.5 bits (173), Expect = 2e-14
 Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 41/267 (15%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           K  ++T     I   IA   A +G R+ L+     ++ VA +++G    G   +V     
Sbjct: 16  KVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDV----- 70

Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 125
                 + + AV       G +D  V+       +     V E+++ K + IN    + +
Sbjct: 71  --SDSQSVEAAVAAVISAFGRIDILVNSAGV-ALLAPAEDVSEEDWDKTIDINLKGSFLM 127

Query: 126 LKAVGRRMKESKAGGSIVFLTS---IIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
            +AVGR M     GG IV L S   ++  ER       AY A  A +  + +  A+E G 
Sbjct: 128 AQAVGRHMIA-AGGGKIVNLASQAGVVALER-----HVAYCASKAGVVGMTKVLALEWGP 181

Query: 183 HKIRVNGIARGLHLQDEYPIAVGQ--------ERAVKLV---REAAPLHRWLDVKNDLAS 231
           + I VN I+  + L       +G+        ERA KL+   R A P         ++A+
Sbjct: 182 YGITVNAISPTVVLT-----ELGKKAWAGEKGERAKKLIPAGRFAYP--------EEIAA 228

Query: 232 TVIYLISDGSRYMTGTTIYVDGAQSIT 258
             ++L SD +  +TG  + +DG  +I 
Sbjct: 229 AALFLASDAAAMITGENLVIDGGYTIQ 255

Length = 255

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 70.4 bits (173), Expect = 2e-14
 Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 20/190 (10%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKM-MGSLKGGQPVEVVGL 63
           K VL+T     I K +A  L K G  +++V  +E +L    E++   +   GQ V  +  
Sbjct: 2   KHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYISA 61

Query: 64  DM--EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINF 119
           D+   E+ E AF +AV+K     G  D  V+C   +  G  +D   +  +EF++ + +N+
Sbjct: 62  DLSDYEEVEQAFAQAVEK----GGPPDLVVNCAGISIPGLFED---LTAEEFERGMDVNY 114

Query: 120 VAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP--GAAAYGACAASIHQLVRTAA 177
                +  AV   MKE +  G IVF++S       L    G +AY     ++  L  +  
Sbjct: 115 FGSLNVAHAVLPLMKEQR-PGHIVFVSSQA----ALVGIYGYSAYCPSKFALRGLAESLR 169

Query: 178 MEIGKHKIRV 187
            E+  + IRV
Sbjct: 170 QELKPYNIRV 179

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 69.8 bits (171), Expect = 3e-14
 Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 5/149 (3%)

Query: 108 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGG---SIVFLTSIIGAERGLYPGAAAYGA 164
           E  + K++ IN  + +FL +A+   ++ +        ++ + SI G          +YGA
Sbjct: 103 ESGWDKVMDINVKSVFFLTQALLPLLRAAATAENPARVINIGSIAGI-VVSGLENYSYGA 161

Query: 165 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLD 224
             A++HQL R  A E+    I VN IA G          +    A++   ++ PL RW  
Sbjct: 162 SKAAVHQLTRKLAKELAGEHITVNAIAPGRFPSKMTAFLLNDPAALEAEEKSIPLGRW-G 220

Query: 225 VKNDLASTVIYLISDGSRYMTGTTIYVDG 253
              D+A   I L S    Y+TG  I VDG
Sbjct: 221 RPEDMAGLAIMLASRAGAYLTGAVIPVDG 249

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 70.0 bits (172), Expect = 4e-14
 Identities = 72/268 (26%), Positives = 110/268 (41%), Gaps = 37/268 (13%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
             K V++      I+  IA   A+ G  + +       S   EK+  ++   Q     GL
Sbjct: 8   AGKNVVVVGGTSGINLGIAQAFARAGANVAV------ASRSQEKVDAAVAQLQQAGPEGL 61

Query: 64  DMEED--REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDP-LQVGEDEFKKLVKINFV 120
            +  D     A + A  +     G +D  V      G    P   +  + FK +V I+ +
Sbjct: 62  GVSADVRDYAAVEAAFAQIADEFGPIDVLVS--GAAGNFPAPAAGMSANGFKTVVDIDLL 119

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS--IHQLVRTAAM 178
             + +LKA    ++  + G SI+     I A +   P       CAA   +  L RT A+
Sbjct: 120 GTFNVLKAAYPLLR--RPGASIIQ----ISAPQAFVPMPMQAHVCAAKAGVDMLTRTLAL 173

Query: 179 EIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL---------VREAAPLHRWLDVKNDL 229
           E G   IRVN I  G       PIA G E   +L         V ++ PL R    K D+
Sbjct: 174 EWGPEGIRVNSIVPG-------PIA-GTEGMARLAPSPELQAAVAQSVPLKRN-GTKQDI 224

Query: 230 ASTVIYLISDGSRYMTGTTIYVDGAQSI 257
           A+  ++L SD + Y+TG  + VDG  S+
Sbjct: 225 ANAALFLASDMASYITGVVLPVDGGWSL 252

Length = 264

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 69.8 bits (171), Expect = 4e-14
 Identities = 66/251 (26%), Positives = 108/251 (43%), Gaps = 19/251 (7%)

Query: 9   LLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK--GGQPVEVVGLDME 66
            +T  G  I + IA  LA+ G  + L     R      +    ++  G + +++   D+ 
Sbjct: 12  FVTGAGSGIGQRIAIGLAQAGADVALFD--LRTDDGLAETAEHIEAAGRRAIQIAA-DVT 68

Query: 67  EDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLL 126
                    AV +    LG L   V+            ++ E++++ ++ IN    +   
Sbjct: 69  SKA--DLRAAVARTEAELGALTLAVNAAGIANA-NPAEEMEEEQWQTVMDINLTGVFLSC 125

Query: 127 KAVGRRMKESKAGGSIVFLTSIIG--AERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           +A  R M E+  GGSIV + S+ G    RGL    A Y A  A +  L ++ AME     
Sbjct: 126 QAEARAMLEN-GGGSIVNIASMSGIIVNRGLL--QAHYNASKAGVIHLSKSLAMEWVGRG 182

Query: 185 IRVNGIARGLHL--QDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 242
           IRVN I+ G      +  P  V Q    KL  E  P+ R   V +++    ++L+SD + 
Sbjct: 183 IRVNSISPGYTATPMNTRPEMVHQ---TKLFEEQTPMQRMAKV-DEMVGPAVFLLSDAAS 238

Query: 243 YMTGTTIYVDG 253
           + TG  + VDG
Sbjct: 239 FCTGVDLLVDG 249

Length = 254

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 68.7 bits (168), Expect = 8e-14
 Identities = 57/252 (22%), Positives = 112/252 (44%), Gaps = 14/252 (5%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
           + K  ++T     + + +A  LA+ GC +V + N    +   E++     G + + +   
Sbjct: 9   EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGI-NIVEPTETIEQVTAL--GRRFLSLTAD 65

Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVA 121
             + D        +++A    G++D  V+     G  + +D ++  E ++  ++ +N  +
Sbjct: 66  LRKID---GIPALLERAVAEFGHIDILVN---NAGLIRREDAIEFSEKDWDDVMNLNIKS 119

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
            +F+ +A  +       GG I+ + S++  + G+     +Y A  + +  + R  A E  
Sbjct: 120 VFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIR--VPSYTASKSGVMGVTRLMANEWA 177

Query: 182 KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 241
           KH I VN IA G    +        E+    + +  P  RW  + +DL   V++L S  S
Sbjct: 178 KHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRW-GLPSDLMGPVVFLASSAS 236

Query: 242 RYMTGTTIYVDG 253
            Y+ G TI VDG
Sbjct: 237 DYINGYTIAVDG 248

Length = 253

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 68.6 bits (168), Expect = 1e-13
 Identities = 56/252 (22%), Positives = 102/252 (40%), Gaps = 14/252 (5%)

Query: 5   AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           ++RVL+T     + + IA  LA  G  ++++             + +       + +GL 
Sbjct: 6   SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLA 65

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
            +     A   A+D   +  G LD  V+            ++  +E+  ++ +N    + 
Sbjct: 66  FDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFA-ELSIEEWDDVIDVNLDGFFN 124

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           + +A    M  ++ GG IV + S+ G       G   Y A  A +  L +T A E+    
Sbjct: 125 VTQAALPPMIRARRGGRIVNIASVAGVRG--NRGQVNYAASKAGLIGLTKTLANELAPRG 182

Query: 185 IRVNGIARGLHLQDEYPIAVGQERAVKL---VREAAPLHRWLDVKNDLASTVIYLISDGS 241
           I VN +A G        I             +    P+ R  +  +++A+ V +L+SD +
Sbjct: 183 ITVNAVAPGA-------INTPMADNAAPTEHLLNPVPVQRLGE-PDEVAALVAFLVSDAA 234

Query: 242 RYMTGTTIYVDG 253
            Y+TG  I VDG
Sbjct: 235 SYVTGQVIPVDG 246

Length = 249

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 68.2 bits (167), Expect = 1e-13
 Identities = 64/250 (25%), Positives = 105/250 (42%), Gaps = 11/250 (4%)

Query: 9   LLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEED 68
           L+T     +   IA  LA  G  +++ G  R  +++   +      G   E +  D+  D
Sbjct: 15  LVTGSARGLGFEIARALAGAGAHVLVNG--RNAATLEAAVAALRAAGGAAEALAFDIA-D 71

Query: 69  REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL-QVGEDEFKKLVKINFVAPWFLLK 127
            E A   A  +     G LD  V+      + + PL ++ +   + L++ + VAP  L +
Sbjct: 72  EE-AVAAAFARIDAEHGRLDILVN--NVGARDRRPLAELDDAAIRALLETDLVAPILLSR 128

Query: 128 AVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRV 187
              +RMK  +  G I+ +TSI G  +    G A Y A    +  L+R  A E G H I  
Sbjct: 129 LAAQRMKR-QGYGRIIAITSIAG--QVARAGDAVYPAAKQGLTGLMRALAAEFGPHGITS 185

Query: 188 NGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGT 247
           N IA G    +              + +  PL RW     ++A   ++L S  + Y+ G 
Sbjct: 186 NAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGR-PEEIAGAAVFLASPAASYVNGH 244

Query: 248 TIYVDGAQSI 257
            + VDG  S+
Sbjct: 245 VLAVDGGYSV 254

Length = 256

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 68.2 bits (167), Expect = 2e-13
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 10/151 (6%)

Query: 109 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 168
           ++F++++ I+  AP+ + KAV   M + K  G I+ + S++ +E G     +AY A    
Sbjct: 109 EDFRQVIDIDLNAPFIVSKAVIPSMIK-KGHGKIINICSMM-SELG-RETVSAYAAAKGG 165

Query: 169 IHQLVRTAAMEIGKHKIRVNGIARG-LHLQDEYPIAVGQERAVK-----LVREAAPLHRW 222
           +  L +  A E G+  I+ NGI  G +      P+   Q    +      +    P  RW
Sbjct: 166 LKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARW 225

Query: 223 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 253
            D   DLA   ++L SD S ++ G  +YVDG
Sbjct: 226 GD-PEDLAGPAVFLASDASNFVNGHILYVDG 255

Length = 265

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 67.8 bits (166), Expect = 2e-13
 Identities = 68/265 (25%), Positives = 107/265 (40%), Gaps = 39/265 (14%)

Query: 8   VLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEE 67
            L+T     I   IA  LA  G  +V+   +     +AEK+  + +GG     +G+  + 
Sbjct: 4   ALVTGGASGIGLAIAKRLAAEGAAVVVADID---PEIAEKVAEAAQGG--PRALGVQCDV 58

Query: 68  DREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVAPWFL 125
             E     A ++A    G LD  V   +  G        +   +++ + + IN    + +
Sbjct: 59  TSEAQVQSAFEQAVLEFGGLDIVV---SNAGIATSSPIAETSLEDWNRSMDINLTGHFLV 115

Query: 126 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG--AAAYGACAASIHQLVRTAAMEIGKH 183
            +   R MK    GG+IVF      ++  + PG  AAAY A  A+   L R  A+E G+ 
Sbjct: 116 SREAFRIMKSQGIGGNIVF----NASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGED 171

Query: 184 KIRVN-----GIARGLHLQDE-----YPIAVGQ-ERAVK----LVREAAPLHRWLDVKND 228
            IRVN      + RG  + +         A G  E   +    L RE  P         D
Sbjct: 172 GIRVNTVNPDAVFRGSKIWEGVWRAARAKAYGLLEEEYRTRNLLKREVLP--------ED 223

Query: 229 LASTVIYLISDGSRYMTGTTIYVDG 253
           +A  V+ + S+     TG  + VDG
Sbjct: 224 VAEAVVAMASEDFGKTTGAIVTVDG 248

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 67.3 bits (165), Expect = 3e-13
 Identities = 62/239 (25%), Positives = 99/239 (41%), Gaps = 24/239 (10%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K  L+T     I +  A  LA+ G ++VL    E RL ++A+++     G      + LD
Sbjct: 7   KVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEI-----GAGAALALALD 61

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM--QDPLQVGEDEFKKLVKINFVAP 122
           +  DR  A + A++   +  G +D  V+     G        +   D++ +++  N    
Sbjct: 62  VT-DRA-AVEAAIEALPEEFGRIDILVN---NAGLALGDPLDEADLDDWDRMIDTNVKGL 116

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
               +AV   M E K  G I+ L SI G     YPG A YGA  A++         E+  
Sbjct: 117 LNGTRAVLPGMVERK-SGHIINLGSIAGRY--PYPGGAVYGATKAAVRAFSLGLRQELAG 173

Query: 183 HKIRVNGIARGLHLQDEY---PIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 238
             IRV  I+ GL    E+         ERA K+ +    L        D+A  V++  +
Sbjct: 174 TGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALT-----PEDIAEAVLFAAT 227

Length = 246

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 67.4 bits (165), Expect = 3e-13
 Identities = 68/251 (27%), Positives = 109/251 (43%), Gaps = 43/251 (17%)

Query: 21  IAFHLAKR----GCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I    A+R    G R+V+   +ERRL   A+++   L G   VE V  D+  E   +   
Sbjct: 30  IGSATARRALEEGARVVISDIHERRLGETADELAAEL-GLGRVEAVVCDVTSEAQVDALI 88

Query: 74  DEAVDKACQILGNLDAFVHCYTYEG-----KMQDPLQVGEDEFKKLVKINFVAPWFLLKA 128
           D AV++    LG LD  V+     G      M D      DE+ +++ +     +   +A
Sbjct: 89  DAAVER----LGRLDVLVNNAGLGGQTPVVDMTD------DEWSRVLDVTLTGTFRATRA 138

Query: 129 VGRRMKESKAGGSIVFLTSIIG--AERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIR 186
             R M+    GG IV   S++G  A+ G     A Y A  A +  L R +A+E  ++ +R
Sbjct: 139 ALRYMRARGHGGVIVNNASVLGWRAQHG----QAHYAAAKAGVMALTRCSALEAAEYGVR 194

Query: 187 VNGIARGLHLQDEYPIAVGQERAVKLV------REAAPLHRWLDVKNDLASTVIYLISDG 240
           +N +A  + +          E   +L       R A P   W     ++A+ + +L SD 
Sbjct: 195 INAVAPSIAMHPFLAKVTSAELLDELAAREAFGRAAEP---W-----EVANVIAFLASDY 246

Query: 241 SRYMTGTTIYV 251
           S Y+TG  + V
Sbjct: 247 SSYLTGEVVSV 257

Length = 262

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 67.4 bits (164), Expect = 3e-13
 Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 11/254 (4%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-RRLSSVAEKMMGSLKGGQPVEVVG 62
             KR L+T     I K +A    + G ++ +       L  +A+++      G  V  V 
Sbjct: 8   HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGT---SGGKVVPVC 64

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
            D+ + ++      +D+    LG +D  V C      +   L +  +EF++L   N    
Sbjct: 65  CDVSQHQQ--VTSMLDQVTAELGGIDIAV-CNAGIITVTPMLDMPLEEFQRLQNTNVTGV 121

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
           +   +A  + M +   GG I+   S+ G    +    + Y A  A++  L +  A+E+  
Sbjct: 122 FLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAP 181

Query: 183 HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 242
           HKIRVN ++ G ++  E      + +   L     PL R L    +LA   +YL S+ S 
Sbjct: 182 HKIRVNSVSPG-YILTELVEPYTEYQP--LWEPKIPLGR-LGRPEELAGLYLYLASEASS 237

Query: 243 YMTGTTIYVDGAQS 256
           YMTG+ I +DG  +
Sbjct: 238 YMTGSDIVIDGGYT 251

Length = 253

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 67.0 bits (164), Expect = 3e-13
 Identities = 62/183 (33%), Positives = 86/183 (46%), Gaps = 23/183 (12%)

Query: 85  GNLDAFVHCYTYEGKMQ---DPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGS 141
           G LD  VHC  + GK +   D      + F + ++I+  +   L KA    M E   GGS
Sbjct: 86  GKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE---GGS 142

Query: 142 IVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYP 201
           IV LT  +G  R + P     G   A++   VR  A E+G   IRVN I+ G       P
Sbjct: 143 IVTLT-YLGGVRAI-PNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAG-------P 193

Query: 202 I------AVGQ-ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 254
           I      AVG     +  V E APL R +  + ++ +T  +L+SD +  +TG TIYVD  
Sbjct: 194 IRTLASSAVGGILDMIHHVEEKAPLRRTV-TQTEVGNTAAFLLSDLASGITGQTIYVDAG 252

Query: 255 QSI 257
             I
Sbjct: 253 YCI 255

Length = 258

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 67.1 bits (164), Expect = 4e-13
 Identities = 74/277 (26%), Positives = 113/277 (40%), Gaps = 55/277 (19%)

Query: 7   RVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
            VL+T+    I  N+A  L K+G R+V+   NE  L    EK +  LK    V  V  D+
Sbjct: 2   NVLVTASSRGIGFNVARELLKKGARVVISSRNEENL----EKALKELKEYGEVYAVKADL 57

Query: 66  EEDREGAFDEAVDKACQILGNLDAFVH---------CYTYEGKMQDPLQVGEDEFKKLVK 116
            +  +      V +A ++LG +DA V          C  +E    D L+           
Sbjct: 58  SDKDD--LKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAA--------L 107

Query: 117 INFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTA 176
           ++ VAP +L   + +   E K  G +V+L+S+   E    P         A + QL +  
Sbjct: 108 LHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEP--MPPLVLADVTRAGLVQLAKGV 165

Query: 177 AMEIGKHKIRVNGI---------ARGLHLQDEYPIAVGQERAV-------KLVREAAPLH 220
           +   G   IR   +         AR      E    + +ER V       + V E  PL 
Sbjct: 166 SRTYGGKGIRAYTVLLGSFDTPGAR------ENLARIAEERGVSFEETWEREVLERTPLK 219

Query: 221 R---WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 254
           R   W     +L S + +L+S+ + YM G+TI  DGA
Sbjct: 220 RTGRW----EELGSLIAFLLSENAEYMLGSTIVFDGA 252

Length = 259

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 66.2 bits (162), Expect = 6e-13
 Identities = 66/266 (24%), Positives = 116/266 (43%), Gaps = 41/266 (15%)

Query: 8   VLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDME 66
           VL+T     I   +A  LA+ G R+  V  N  +L  +   +      G P     LD+ 
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRY---GYPFATYKLDVA 57

Query: 67  EDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGE------DEFKKLVKINFV 120
           +    A DE V +  +  G +D  V+           L++G       ++++    +N  
Sbjct: 58  DSA--AVDEVVQRLEREYGPIDVLVNVAGI-------LRLGAIDSLSDEDWQATFAVNTF 108

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
             + + +AV  RMK  ++G +IV + S   A      G AAY A  A++  L +   +E+
Sbjct: 109 GVFNVSQAVSPRMKRRRSG-AIVTVGS--NAANVPRMGMAAYAASKAALTMLTKCLGLEL 165

Query: 181 GKHKIRVNGIA---------RGLHLQDEYPIAVGQERAVK----LVREAAPLHRWLDVKN 227
             + IR N ++         R L   DEY    G+++ +       R   PL + +   +
Sbjct: 166 APYGIRCNVVSPGSTDTEMQRQL-WNDEY----GEQQVIAGSPEQFRLGIPLGK-IAEPS 219

Query: 228 DLASTVIYLISDGSRYMTGTTIYVDG 253
           D+A+ V++L SD + ++T   + VDG
Sbjct: 220 DIANAVLFLASDLASHITMHDLVVDG 245

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 67.6 bits (165), Expect = 8e-13
 Identities = 72/271 (26%), Positives = 104/271 (38%), Gaps = 23/271 (8%)

Query: 5   AKRV-LLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
           A+RV  +T     I +  A  LA  G  +VL   N     +VA ++ G    G+    V 
Sbjct: 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGR---AVA 469

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKL-VKINFVA 121
           L M+   E A   A        G +D  V+          P +    +  +L + I    
Sbjct: 470 LKMDVTDEQAVKAAFADVALAYGGVDIVVN--NAGIATSSPFEETTLQEWQLNLDILATG 527

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
            + + +   R+M+E   GG+IVF+ S      G    A+AY A  A+   L R  A E G
Sbjct: 528 YFLVAREAFRQMREQGLGGNIVFIASKNAVYAG--KNASAYSAAKAAEAHLARCLAAEGG 585

Query: 182 KHKIRVNGIARGLHLQDE--YPIAVGQERAVKLVREAAPLHRWLDVKN---------DLA 230
            + IRVN +     LQ    +     +ERA      A  L      +          D+A
Sbjct: 586 TYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIA 645

Query: 231 STVIYLISDGSRYMTGTTIYVDG--AQSITR 259
             V +L S  S   TG  I VDG    +  R
Sbjct: 646 EAVFFLASSKSEKTTGCIITVDGGVPAAFLR 676

Length = 676

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 65.5 bits (160), Expect = 1e-12
 Identities = 68/270 (25%), Positives = 116/270 (42%), Gaps = 44/270 (16%)

Query: 5   AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGL 63
            K V++T     + K +A   A+ G  +V+ G  + +L     ++      GQ V  V +
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEI--EQFPGQ-VLTVQM 57

Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVH-------CYTYEGKMQDPLQVGEDEFKKLVK 116
           D+  + E    + V++  +  G +DA ++       C   +        +  + +  ++ 
Sbjct: 58  DVR-NPEDV-QKMVEQIDEKFGRIDALINNAAGNFICPAED--------LSVNGWNSVID 107

Query: 117 INFVAPWFLLKAVGRRMKESKAGGSIVFL--TSIIGAERGLYPGAAAYGACAASIHQLVR 174
           I     ++  +AVG+   E    G+I+ +  T    A  G+   AAA     A +  + R
Sbjct: 108 IVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAA----KAGVLAMTR 163

Query: 175 TAAMEIG-KHKIRVNGIARGLHLQDEYPIA--------VGQERAVKLVREAAPLHRWLDV 225
           T A+E G K+ IRVN IA G       PI            E A K   ++ PL R L  
Sbjct: 164 TLAVEWGRKYGIRVNAIAPG-------PIERTGGADKLWESEEAAKRTIQSVPLGR-LGT 215

Query: 226 KNDLASTVIYLISDGSRYMTGTTIYVDGAQ 255
             ++A    +L+SD + Y+ GT I +DG Q
Sbjct: 216 PEEIAGLAYFLLSDEAAYINGTCITMDGGQ 245

Length = 252

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 65.2 bits (159), Expect = 2e-12
 Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 5/186 (2%)

Query: 69  REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKA 128
           R+      V++     G LD   +    E +     +  E EF  ++ +N    W  +K 
Sbjct: 67  RDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKY 126

Query: 129 VGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVN 188
               M  ++ GG+IV   S+ G   G  P  + Y A   ++  L ++AA+E  K  IRVN
Sbjct: 127 QIPLML-AQGGGAIVNTASVAGL--GAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVN 183

Query: 189 GIARGLHLQDEYPIAVGQERAVKLVREAA-PLHRWLDVKNDLASTVIYLISDGSRYMTGT 247
            +   +   D +  A   +        A  P+ R   V+ ++AS V+YL SDG+ + TG 
Sbjct: 184 AVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVE-EVASAVLYLCSDGASFTTGH 242

Query: 248 TIYVDG 253
            + VDG
Sbjct: 243 ALMVDG 248

Length = 253

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 64.9 bits (158), Expect = 2e-12
 Identities = 57/261 (21%), Positives = 99/261 (37%), Gaps = 24/261 (9%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
             K  L+T     I +  A    + G R+ +       +      +G            +
Sbjct: 2   DGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGP-------AACAI 54

Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
            ++   + + D  V       G++D  V+       +   + +  + + +L  IN     
Sbjct: 55  SLDVTDQASIDRCVAALVDRWGSIDILVNNAAL-FDLAPIVDITRESYDRLFAINVSGTL 113

Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 183
           F+++AV R M     GG I+ + S  G  RG       Y A  A++  L ++A + + +H
Sbjct: 114 FMMQAVARAMIAQGRGGKIINMASQAG-RRG-EALVGVYCATKAAVISLTQSAGLNLIRH 171

Query: 184 KIRVNGIARGL-----------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAST 232
            I VN IA G+                     G+++  +LV EA P  R +    DL   
Sbjct: 172 GINVNAIAPGVVDGEHWDGVDAKFARYENRPRGEKK--RLVGEAVPFGR-MGRAEDLTGM 228

Query: 233 VIYLISDGSRYMTGTTIYVDG 253
            I+L S  + Y+   T  VDG
Sbjct: 229 AIFLASTDADYIVAQTYNVDG 249

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 64.4 bits (157), Expect = 3e-12
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 14/198 (7%)

Query: 58  VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKI 117
           V+V  ++++  +  A  E ++K  + LG     V+   Y     D   +  +E  K   +
Sbjct: 68  VKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNN-DFSNLTAEELDKHYMV 126

Query: 118 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAA 177
           N  A   LL +   R  + K+GG I+ +TS  G  +G   G  AY A   +I  L  + A
Sbjct: 127 NVRAT-TLLSSQFARGFDKKSGGRIINMTS--GQFQGPMVGELAYAATKGAIDALTSSLA 183

Query: 178 MEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKLVREAAPLHRWLDVKNDLASTVIY 235
            E+    I VN I  G       P   G   E   + +    P  R +    D A  + +
Sbjct: 184 AEVAHLGITVNAINPG-------PTDTGWMTEEIKQGLLPMFPFGR-IGEPKDAARLIKF 235

Query: 236 LISDGSRYMTGTTIYVDG 253
           L S+ + ++TG  I+ +G
Sbjct: 236 LASEEAEWITGQIIHSEG 253

Length = 256

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 64.4 bits (157), Expect = 3e-12
 Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 10/183 (5%)

Query: 77  VDKACQILGNLDAFVHCYTYEGKMQ-DPL-QVGEDEFKKLVKINFVAPWFLLKAVGRRMK 134
            D      G +D  V+     G M+ D L  V  D +KK + +N        +AV + M 
Sbjct: 74  ADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMA 133

Query: 135 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL 194
           + + GG+IV  +S        +  +  YG     ++ L +  A E+G   IRVN IA G 
Sbjct: 134 K-RGGGAIVNQSST-----AAWLYSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGP 187

Query: 195 HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 254
            +  E    V  +  V  + +  PL R +    DL    ++L+SD + ++TG    VDG 
Sbjct: 188 -IDTEATRTVTPKEFVADMVKGIPLSR-MGTPEDLVGMCLFLLSDEASWITGQIFNVDGG 245

Query: 255 QSI 257
           Q I
Sbjct: 246 QII 248

Length = 250

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 63.4 bits (155), Expect = 6e-12
 Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 20/161 (12%)

Query: 105 QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA 164
              E  F +    N   P+FL++A+   +       SIV   SI  A  G+ P ++ Y A
Sbjct: 98  DWDEAMFDRSFNTNVKGPYFLIQAL---LPLLANPASIVLNGSI-NAHIGM-PNSSVYAA 152

Query: 165 CAASIHQLVRTAAMEIGKHKIRVNGIARG---------LHLQDEYPIAVGQERAVKLVRE 215
             A++  L +T + E+    IRVN ++ G         L L +        +     ++ 
Sbjct: 153 SKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEAT-----LDAVAAQIQA 207

Query: 216 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 256
             PL R+     ++A  V+YL SD S ++ G+ I VDG  S
Sbjct: 208 LVPLGRFGTP-EEIAKAVLYLASDESAFIVGSEIIVDGGMS 247

Length = 249

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 63.2 bits (154), Expect = 7e-12
 Identities = 67/253 (26%), Positives = 114/253 (45%), Gaps = 19/253 (7%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           +R L+T     I   +A  LA+ G  ++L G +  +L++ AE +      GQ +    L 
Sbjct: 11  RRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESL-----KGQGLSAHALA 65

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ--DPLQ-VGEDEFKKLVKINFVA 121
            +     A   A+D     +G +D  V+       MQ   PL+    D F++L++ N  +
Sbjct: 66  FDVTDHDAVRAAIDAFEAEIGPIDILVN----NAGMQFRTPLEDFPADAFERLLRTNISS 121

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGA-ERGLYPGAAAYGACAASIHQLVRTAAMEI 180
            +++ +AV R M  ++  G I+ + S+  A  R   PG A Y A   ++  L +  A + 
Sbjct: 122 VFYVGQAVARHMI-ARGAGKIINIASVQSALAR---PGIAPYTATKGAVGNLTKGMATDW 177

Query: 181 GKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG 240
            KH ++ N IA G          V        + +  P  RW  V+ +L    ++L SD 
Sbjct: 178 AKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVE-ELVGACVFLASDA 236

Query: 241 SRYMTGTTIYVDG 253
           S ++ G  +YVDG
Sbjct: 237 SSFVNGHVLYVDG 249

Length = 255

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 63.3 bits (154), Expect = 8e-12
 Identities = 69/266 (25%), Positives = 114/266 (42%), Gaps = 31/266 (11%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVG--L 63
           K  L+T     I + IA   A+ G  L+L+     +  +A+++ G  +G +   VV    
Sbjct: 7   KTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCG--RGHRCTAVVADVR 64

Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
           D       +   A+ +A +  G +D  V       ++   L + +++    + IN    W
Sbjct: 65  DPA-----SVAAAIKRAKEKEGRIDILV-NNAGVCRLGSFLDMSDEDRDFHIDINIKGVW 118

Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIG---AERGLYPGAAAYGACAASIHQLVRTAAMEI 180
            + KAV   M   K  G IV ++S+ G   A+    PG  AY    A+I  L ++ A+E 
Sbjct: 119 NVTKAVLPEMIARK-DGRIVMMSSVTGDMVAD----PGETAYALTKAAIVGLTKSLAVEY 173

Query: 181 GKHKIRVNGIARGLHLQDEYPIAVG---------QERAVKLVREAAPLHRWLDVKNDLAS 231
            +  IRVN I  G       P+A            E  +  + +A PL R L    ++  
Sbjct: 174 AQSGIRVNAICPGYVRT---PMAESIARQSNPEDPESVLTEMAKAIPLRR-LADPLEVGE 229

Query: 232 TVIYLISDGSRYMTGTTIYVDGAQSI 257
              +L SD S Y+TGT   +DG  ++
Sbjct: 230 LAAFLASDESSYLTGTQNVIDGGSTL 255

Length = 263

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 61.9 bits (151), Expect = 2e-11
 Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 36/203 (17%)

Query: 63  LDMEEDREGAFDEA--VDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFV 120
           LD+ +D E  FD    VD  C   G LD +          +  L    +E++ +   N  
Sbjct: 52  LDLSDDLEPLFDWVPSVDILCNTAGILDDY----------KPLLDTSLEEWQHIFDTNLT 101

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
           + + L +A   +M E K  G I+ + SI     G   G AAY A   ++    +  A++ 
Sbjct: 102 STFLLTRAYLPQMLERK-SGIIINMCSIASFVAG--GGGAAYTASKHALAGFTKQLALDY 158

Query: 181 GKHKIRVNGIARGLHLQDEYPIAV----------GQERAVKLVREAAPLHRWLDVKNDLA 230
            K  I+V GIA G         AV              A  + RE  P+ RW + + ++A
Sbjct: 159 AKDGIQVFGIAPG---------AVKTPMTAADFEPGGLADWVARE-TPIKRWAEPE-EVA 207

Query: 231 STVIYLISDGSRYMTGTTIYVDG 253
              ++L S  + YM GT + +DG
Sbjct: 208 ELTLFLASGKADYMQGTIVPIDG 230

Length = 235

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 62.2 bits (151), Expect = 2e-11
 Identities = 61/263 (23%), Positives = 109/263 (41%), Gaps = 24/263 (9%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
             K  ++T     I K IA  LA+ G  + +   N+   ++VA+++  +  GG+    +G
Sbjct: 6   NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA--GGK---AIG 60

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEF---KKLVKINF 119
           + M+   E A +  +DK  +  G++D  V        +Q    +    F   KK+  I+ 
Sbjct: 61  VAMDVTNEDAVNAGIDKVAERFGSVDILVS----NAGIQIVNPIENYSFADWKKMQAIHV 116

Query: 120 VAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME 179
              +   KA  + M +   GG ++++ S+   E    P  +AY      +  L R  A E
Sbjct: 117 DGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEAS--PLKSAYVTAKHGLLGLARVLAKE 174

Query: 180 IGKHKIRVNGIARGLHL----QDEYP-----IAVGQERAVKLVREAAPLHRWLDVKNDLA 230
             KH +R + +  G         + P     + + +E  VK V     +        D+A
Sbjct: 175 GAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVA 234

Query: 231 STVIYLISDGSRYMTGTTIYVDG 253
            TV++L S  S  +TG +  V  
Sbjct: 235 QTVLFLSSFPSAALTGQSFVVSH 257

Length = 262

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 62.0 bits (151), Expect = 2e-11
 Identities = 62/267 (23%), Positives = 105/267 (39%), Gaps = 29/267 (10%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
             K  L+T     I   IA   A+ G  + L   +       A  +   + G     V+ 
Sbjct: 6   AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGA---RVLA 62

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK--MQDPLQVGEDEFKKLVKINFV 120
           +  +     +   AV  A +  G LD  V+     G     DPL + ++++++   ++  
Sbjct: 63  VPADVTDAASVAAAVAAAEEAFGPLDVLVNN---AGINVFADPLAMTDEDWRRCFAVDLD 119

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTS-----IIGAERGLYPGAAAYGACAASIHQLVRT 175
             W   +AV   M E +  GSIV + S     II       PG   Y      +  L R 
Sbjct: 120 GAWNGCRAVLPGMVE-RGRGSIVNIASTHAFKII-------PGCFPYPVAKHGLLGLTRA 171

Query: 176 AAMEIGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLH--RWLDVKNDLA 230
             +E     +RVN IA G     L +++  A     A +   E   L   + +    ++A
Sbjct: 172 LGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAAR--AETLALQPMKRIGRPEEVA 229

Query: 231 STVIYLISDGSRYMTGTTIYVDGAQSI 257
            T ++L SD + ++  T I +DG +S+
Sbjct: 230 MTAVFLASDEAPFINATCITIDGGRSV 256

Length = 260

>gnl|CDD|236124 PRK07889, PRK07889, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 61.9 bits (151), Expect = 2e-11
 Identities = 78/276 (28%), Positives = 116/276 (42%), Gaps = 62/276 (22%)

Query: 6   KRVLLTSDGDEISKNIAFHLAK----RGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVV 61
           KR+L+T    + S  IAFH+A+    +G  +VL G  R L  + E++   L   +P  V+
Sbjct: 8   KRILVTGVITDSS--IAFHVARVAQEQGAEVVLTGFGRALR-LTERIAKRLP--EPAPVL 62

Query: 62  GLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINF 119
            LD+  EE          D+  + +  LD  VH   +      P        +  +  NF
Sbjct: 63  ELDVTNEEH----LASLADRVREHVDGLDGVVHSIGFA-----P--------QSALGGNF 105

Query: 120 V-APW-----------FLLKAVGRRMKE-SKAGGSIVFLTSIIGAERGLYPGAAAYGACA 166
           + APW           + LK++ + +      GGSIV L     A    +P     G   
Sbjct: 106 LDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLD--FDATVA-WPAYDWMGVAK 162

Query: 167 ASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA-------VGQERAVKLVREAAPL 219
           A++    R  A ++G   IRVN +A G       PI         G E   +   E APL
Sbjct: 163 AALESTNRYLARDLGPRGIRVNLVAAG-------PIRTLAAKAIPGFELLEEGWDERAPL 215

Query: 220 HRWLDVKN--DLASTVIYLISDGSRYMTGTTIYVDG 253
             W DVK+   +A  V+ L+SD     TG  ++VDG
Sbjct: 216 G-W-DVKDPTPVARAVVALLSDWFPATTGEIVHVDG 249

Length = 256

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 62.1 bits (151), Expect = 2e-11
 Identities = 59/255 (23%), Positives = 114/255 (44%), Gaps = 22/255 (8%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           K  ++T     + +  A  LAK G  +++  +          +    K G+ V  V +D+
Sbjct: 16  KVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIE---KEGRKVTFVQVDL 72

Query: 66  --EEDREGAFDEAVDKACQ--ILGNLDAFVHCYTYEGKMQDPL-QVGEDEFKKLVKINFV 120
              E  E    EA+++  +  IL N    +         + PL +  ++++  ++ IN  
Sbjct: 73  TKPESAEKVVKEALEEFGKIDILVNNAGTIR--------RAPLLEYKDEDWNAVMDINLN 124

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
           + + L +AV + M +  +G  I+ + S++  + G +    AY A    +  L +  A E+
Sbjct: 125 SVYHLSQAVAKVMAKQGSG-KIINIASMLSFQGGKF--VPAYTASKHGVAGLTKAFANEL 181

Query: 181 GKHKIRVNGIARG-LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD 239
             + I+VN IA G +   +  PI   + R  +++ +  P  RW +  +DL    ++L S 
Sbjct: 182 AAYNIQVNAIAPGYIKTANTAPIRADKNRNDEIL-KRIPAGRWGEP-DDLMGAAVFLASR 239

Query: 240 GSRYMTGTTIYVDGA 254
            S Y+ G  + VDG 
Sbjct: 240 ASDYVNGHILAVDGG 254

Length = 258

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 61.3 bits (149), Expect = 3e-11
 Identities = 63/261 (24%), Positives = 110/261 (42%), Gaps = 17/261 (6%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEV 60
           M  + K  ++T  G    + IA   A+ G R+V+       +  AE++   +        
Sbjct: 1   MRLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIAD---INADGAERVAADI----GEAA 53

Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFV 120
           + +  +  +    +  V+ A    G LD  V+      + +  L+V E+EF ++  +N  
Sbjct: 54  IAIQADVTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVK 113

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAE-RGLYPGAAAYGACAASIHQLVRTAAME 179
           + +   +A+   M+E + GG I+ + S  G   R   PG   Y A    +    +  A+E
Sbjct: 114 SIYLSAQALVPHMEE-QGGGVIINIASTAGLRPR---PGLTWYNASKGWVVTATKAMAVE 169

Query: 180 IGKHKIRVNGI---ARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL 236
           +    IRVN +   A    L   +      E   K  R   PL R      D+A+  +YL
Sbjct: 170 LAPRNIRVNCLCPVAGETPLLSMFMGEDTPENRAKF-RATIPLGRLSTPD-DIANAALYL 227

Query: 237 ISDGSRYMTGTTIYVDGAQSI 257
            SD + ++TG  + VDG + I
Sbjct: 228 ASDEASFITGVALEVDGGRCI 248

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 61.2 bits (149), Expect = 3e-11
 Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 20/235 (8%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
           Q K  L+T  G  I + +A  LAK G  + L+   E  L +VAE++      G  V +  
Sbjct: 6   QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY---GVKVVIAT 62

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
            D+ +        A+++    LG++D  ++      K    L++   E++K++++N +  
Sbjct: 63  ADVSD--YEEVTAAIEQLKNELGSIDILINNAGI-SKFGKFLELDPAEWEKIIQVNLMGV 119

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
           ++  +AV   M E ++G  I+ ++S  G ++G     +AY A    +  L  +   E+ K
Sbjct: 120 YYATRAVLPSMIERQSG-DIINISSTAG-QKG-AAVTSAYSASKFGVLGLTESLMQEVRK 176

Query: 183 HKIRVNGI---------ARGLHLQDEYPIAVGQ-ERAVKLVREAAPLHRWLDVKN 227
           H IRV  +         A  L L D  P  V Q E   + +     L++   +K+
Sbjct: 177 HNIRVTALTPSTVATDMAVDLGLTDGNPDKVMQPEDLAEFIVAQLKLNKRTFIKS 231

Length = 239

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 60.9 bits (148), Expect = 4e-11
 Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 26/256 (10%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEV 60
           M  + K+V +    + +   +A+   K G ++ +  N R   +  ++M  +L     +  
Sbjct: 1   MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCI--NSRN-ENKLKRMKKTLSKYGNIHY 57

Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKL---VKI 117
           V  D+    E A    ++KA ++L  +D  V   T  G ++D +    +EF  L   +  
Sbjct: 58  VVGDVSS-TESA-RNVIEKAAKVLNAIDGLV--VTVGGYVEDTV----EEFSGLEEMLTN 109

Query: 118 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAA 177
           +   P + + A  R +KE   G SIV ++S+ G  +   P   +Y    A + + V   A
Sbjct: 110 HIKIPLYAVNASLRFLKE---GSSIVLVSSMSGIYKA-SPDQLSYAVAKAGLAKAVEILA 165

Query: 178 MEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI 237
            E+    IRVNGIA      D  P     ++  KL  + AP         D A  +I+L+
Sbjct: 166 SELLGRGIRVNGIAPTTISGDFEP-ERNWKKLRKLGDDMAP-------PEDFAKVIIWLL 217

Query: 238 SDGSRYMTGTTIYVDG 253
           +D + ++ G  I VDG
Sbjct: 218 TDEADWVDGVVIPVDG 233

Length = 238

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 61.3 bits (149), Expect = 4e-11
 Identities = 58/261 (22%), Positives = 112/261 (42%), Gaps = 29/261 (11%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVL--VGNERRLSSVAEKMMGSLKGGQPVEVV 61
           + K V++T     + + +A    K   ++V+    +E   + VAE++  +  GG+ + V 
Sbjct: 6   EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA--GGEAIAVK 63

Query: 62  G-LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGE---DEFKKLVKI 117
           G + +E D       AV +     G LD  ++       +++ +   E   +++ K++  
Sbjct: 64  GDVTVESDVVNLIQTAVKE----FGTLDVMIN----NAGIENAVPSHEMSLEDWNKVINT 115

Query: 118 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAA 177
           N    +   +   +   E    G+I+ ++S+   E+  +P    Y A    +  +  T A
Sbjct: 116 NLTGAFLGSREAIKYFVEHDIKGNIINMSSV--HEQIPWPLFVHYAASKGGVKLMTETLA 173

Query: 178 MEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKNDLAST 232
           ME     IRVN I  G       PI     A  ++RA   V    P+   +    ++A+ 
Sbjct: 174 MEYAPKGIRVNNIGPG---AINTPINAEKFADPKQRAD--VESMIPMGY-IGKPEEIAAV 227

Query: 233 VIYLISDGSRYMTGTTIYVDG 253
             +L S  + Y+TG T++ DG
Sbjct: 228 AAWLASSEASYVTGITLFADG 248

Length = 261

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 61.1 bits (148), Expect = 5e-11
 Identities = 65/255 (25%), Positives = 105/255 (41%), Gaps = 15/255 (5%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKG-GQPVEVVG 62
           + K  ++T  G  I        A+ G ++ +    R     AEK+   ++  G   +   
Sbjct: 2   KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNR---EAAEKVAADIRAKGGNAQAFA 58

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
            D+ +    + D AV  A Q LG +D  V+   ++ K     +     +++L+ IN    
Sbjct: 59  CDITD--RDSVDTAVAAAEQALGPVDVLVNNAGWD-KFGPFTKTEPPLWERLIAINLTGA 115

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
             +  AV   M E  AG  IV + S   A R    G A Y AC   +    +T A E  +
Sbjct: 116 LHMHHAVLPGMVERGAG-RIVNIAS--DAARVGSSGEAVYAACKGGLVAFSKTMAREHAR 172

Query: 183 HKIRVNGIARG---LHLQDEYPIAVGQ-ERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 238
           H I VN +  G     L D+        E+  +    A PL R L   +DL   +++  S
Sbjct: 173 HGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGR-LGQPDDLPGAILFFSS 231

Query: 239 DGSRYMTGTTIYVDG 253
           D + ++TG  + V G
Sbjct: 232 DDASFITGQVLSVSG 246

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 60.8 bits (147), Expect = 6e-11
 Identities = 66/255 (25%), Positives = 119/255 (46%), Gaps = 21/255 (8%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK-GGQPVEVVG 62
             K  ++T     I K I   LA+ G ++V+  N  + +  AE ++  L   G  V  V 
Sbjct: 5   NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEA--AENLVNELGKEGHDVYAVQ 62

Query: 63  LDME--EDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKIN 118
            D+   ED     +EAV+      G +D  V+     G  +D    ++  +++++++ +N
Sbjct: 63  ADVSKVEDANRLVEEAVNH----FGKVDILVN---NAGITRDRTFKKLNREDWERVIDVN 115

Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAM 178
             + +    AV   + E++  G I+ ++SIIG   G   G   Y A  A +    ++ A+
Sbjct: 116 LSSVFNTTSAVLPYITEAE-EGRIISISSIIGQAGGF--GQTNYSAAKAGMLGFTKSLAL 172

Query: 179 EIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 238
           E+ K  + VN I  G  +  E    V +E   K+V +  P  R     +++A  V+YL  
Sbjct: 173 ELAKTNVTVNAICPGF-IDTEMVAEVPEEVRQKIVAK-IPKKR-FGQADEIAKGVVYLCR 229

Query: 239 DGSRYMTGTTIYVDG 253
           DG+ Y+TG  + ++G
Sbjct: 230 DGA-YITGQQLNING 243

Length = 247

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 60.7 bits (147), Expect = 6e-11
 Identities = 55/255 (21%), Positives = 96/255 (37%), Gaps = 23/255 (9%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           K  ++T  G  I K I     + G ++V    +    +   +  G       +  V  D+
Sbjct: 2   KVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEG-----PNLFFVHGDV 56

Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 125
            ++    F        + LG +D  V      G       +  +E+ +++ +N   P+ L
Sbjct: 57  ADETLVKFVVY--AMLEKLGRIDVLV-NNAARGSKGILSSLLLEEWDRILSVNLTGPYEL 113

Query: 126 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 185
            +     +   K  G I+ + S    +    P + AY A    +  L    AM +G   I
Sbjct: 114 SRYCRDELI--KNKGRIINIASTRAFQS--EPDSEAYAASKGGLVALTHALAMSLGPD-I 168

Query: 186 RVNGIARGLHLQDEYPIAVGQERAVKLVRE----AAPLHRWLDVKNDLASTVIYLISDGS 241
           RVN I+ G     E      QE     + +      P  R    K D+A+ V++L    +
Sbjct: 169 RVNCISPGWINTTEQ-----QEFTAAPLTQEDHAQHPAGRVGTPK-DIANLVLFLCQQDA 222

Query: 242 RYMTGTTIYVDGAQS 256
            ++TG T  VDG  +
Sbjct: 223 GFITGETFIVDGGMT 237

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 60.7 bits (148), Expect = 7e-11
 Identities = 59/281 (20%), Positives = 109/281 (38%), Gaps = 66/281 (23%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEV 60
           M+   K V +T     I   +A    + G +++                       P   
Sbjct: 4   MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQE-----------DYPFAT 52

Query: 61  VGLDMEEDREGAFDEAVDKACQIL----GNLDAFVHCYTYEG--KMQDPLQVGEDEFKKL 114
             LD+ +        AV + CQ L    G LD  V+     G  +M     + ++++++ 
Sbjct: 53  FVLDVSDA------AAVAQVCQRLLAETGPLDVLVNA---AGILRMGATDSLSDEDWQQT 103

Query: 115 VKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP--GAAAYGACAASIHQL 172
             +N    + L +AV  + +  +  G+IV     +G+     P  G AAYGA  A++  L
Sbjct: 104 FAVNAGGAFNLFRAVMPQFRRQR-SGAIV----TVGSNAAHVPRIGMAAYGASKAALTSL 158

Query: 173 VRTAAMEIGKHKIRVNGIA---------RGLHLQDEYPIAVGQERAVK-----------L 212
            +   +E+  + +R N ++         R L   DE     G+++ +            L
Sbjct: 159 AKCVGLELAPYGVRCNVVSPGSTDTDMQRTL-WVDED----GEQQVIAGFPEQFKLGIPL 213

Query: 213 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 253
            + A P         ++A+ V++L SD + ++T   I VDG
Sbjct: 214 GKIARP--------QEIANAVLFLASDLASHITLQDIVVDG 246

Length = 252

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 60.4 bits (147), Expect = 7e-11
 Identities = 61/245 (24%), Positives = 99/245 (40%), Gaps = 34/245 (13%)

Query: 25  LAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFDEAVDKACQ 82
           L  +G ++V+      L           K G     V +D+  E+D + A   A  K   
Sbjct: 22  LLAQGAKVVI------LDLPNSPGETVAKLGDNCRFVPVDVTSEKDVKAALALAKAK--- 72

Query: 83  ILGNLDAFVHC-------YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM-- 133
             G LD  V+C        TY  K Q P     + F++++ +N +  + +++     M  
Sbjct: 73  -FGRLDIVVNCAGIAVAAKTYNKKGQQP--HSLELFQRVINVNLIGTFNVIRLAAGAMGK 129

Query: 134 KESKAGGS--IVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 191
            E   GG   ++  T+ + A  G   G AAY A    I  +    A ++    IRV  IA
Sbjct: 130 NEPDQGGERGVIINTASVAAFEG-QIGQAAYSASKGGIVGMTLPIARDLAPQGIRVVTIA 188

Query: 192 RGLHLQDEYPIAVGQERAVK--LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTI 249
            GL    + P+  G    V+  L ++     R L    + A  V ++I +   Y+ G  I
Sbjct: 189 PGLF---DTPLLAGLPEKVRDFLAKQVPFPSR-LGDPAEYAHLVQHIIEN--PYLNGEVI 242

Query: 250 YVDGA 254
            +DGA
Sbjct: 243 RLDGA 247

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 59.4 bits (144), Expect = 2e-10
 Identities = 56/280 (20%), Positives = 113/280 (40%), Gaps = 51/280 (18%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K  ++T     +   +A  LA+ G ++  +G N+ +   VA+++         +    LD
Sbjct: 6   KVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAADVLD 65

Query: 65  MEEDREGAFDEAVDKACQIL----GNLDAFVHC-------------YTYEGKMQDPLQVG 107
                      ++++A + +    G +D  ++              +      Q+   + 
Sbjct: 66  RA---------SLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLD 116

Query: 108 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP--GAAAYGAC 165
           E+ ++ +  +N    +   +  G+ M E K GGSI+ ++S+        P     AY A 
Sbjct: 117 EEGWEFVFDLNLNGSFLPSQVFGKDMLEQK-GGSIINISSM----NAFSPLTKVPAYSAA 171

Query: 166 AASIHQLVRTAAMEIGKHKIRVNGIARG----------LHLQDEYPIAVGQERAVKLVRE 215
            A++    +  A+E     +RVN IA G          L   D        +R+ K++  
Sbjct: 172 KAAVSNFTQWLAVEFATTGVRVNAIAPGFFVTPQNRKLLINPDGSY----TDRSNKILGR 227

Query: 216 AAPLHRWLDVKNDLASTVIYLISDG-SRYMTGTTIYVDGA 254
             P+ R+   + +L   +++L S+  S ++TG  I VDG 
Sbjct: 228 -TPMGRFGKPE-ELLGALLFLASEKASSFVTGVVIPVDGG 265

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 59.0 bits (143), Expect = 2e-10
 Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 18/130 (13%)

Query: 131 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 190
           +RM++   GGSI+ L+S            A +G   A++  +V+ AA E+G+  IRVN +
Sbjct: 137 KRMEKV-GGGSIISLSST--GNLVYIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAV 193

Query: 191 ARGLHLQDEYPIAVGQERA------VK-LVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
           + G       PI     +A      VK    E +PL+R +    DLA   ++L S+ + +
Sbjct: 194 SGG-------PIDTDALKAFTNYEEVKAKTEELSPLNR-MGQPEDLAGACLFLCSEKASW 245

Query: 244 MTGTTIYVDG 253
           +TG TI VDG
Sbjct: 246 LTGQTIVVDG 255

Length = 260

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 59.0 bits (143), Expect = 2e-10
 Identities = 70/262 (26%), Positives = 111/262 (42%), Gaps = 27/262 (10%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K  L+T  G  I   IA  L + G ++ +V  NE    + A+K+  S  GG+ + V   D
Sbjct: 3   KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKL--SKDGGKAIAVK-AD 59

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           +  DR+  F  AV +     G+L+  V+             + E++F K+  IN     +
Sbjct: 60  VS-DRDQVFA-AVRQVVDTFGDLNVVVNNAGV-APTTPIETITEEQFDKVYNINVGGVIW 116

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
            ++A     K+   GG I+  TS  G      P  A Y +   ++  L +TAA ++    
Sbjct: 117 GIQAAQEAFKKLGHGGKIINATSQAGVVGN--PELAVYSSTKFAVRGLTQTAARDLASEG 174

Query: 185 IRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRW-------------LDVKNDLAS 231
           I VN  A G+    + P+    + A ++   A     W             L    D+A+
Sbjct: 175 ITVNAYAPGIV---KTPMM--FDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVAN 229

Query: 232 TVIYLISDGSRYMTGTTIYVDG 253
            V +L    S Y+TG TI VDG
Sbjct: 230 CVSFLAGPDSDYITGQTIIVDG 251

Length = 256

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 58.7 bits (142), Expect = 3e-10
 Identities = 68/257 (26%), Positives = 114/257 (44%), Gaps = 18/257 (7%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK--GGQPVEVVG- 62
           K VL+T     I +  A   A RG  + +  N  R ++ AE+   +++  GG+   V G 
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGI--NYARDAAAAEETADAVRAAGGRACVVAGD 60

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
           +  E D    FD          G LDA V+             +     +++   N +  
Sbjct: 61  VANEADVIAMFDAVQSA----FGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGA 116

Query: 123 WFLLKAVGRRMKESK--AGGSIVFLTSIIGAERGLYPGAAA-YGACAASIHQLVRTAAME 179
           +   +   RR+   +   GG+IV ++SI  A R   P     Y     ++  L    A E
Sbjct: 117 YLCAREAARRLSTDRGGRGGAIVNVSSI--ASRLGSPNEYVDYAGSKGAVDTLTLGLAKE 174

Query: 180 IGKHKIRVNGIARGLHLQDEYPIAVGQ-ERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 238
           +G H +RVN +  GL ++ E   + GQ  RA +L     PL R  +  +++A T+++L+S
Sbjct: 175 LGPHGVRVNAVRPGL-IETEIHASGGQPGRAARL-GAQTPLGRAGEA-DEVAETIVWLLS 231

Query: 239 DGSRYMTGTTIYVDGAQ 255
           D + Y+TG  + V G +
Sbjct: 232 DAASYVTGALLDVGGGR 248

Length = 248

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 58.4 bits (141), Expect = 3e-10
 Identities = 56/242 (23%), Positives = 94/242 (38%), Gaps = 17/242 (7%)

Query: 8   VLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDME 66
           +L+T   D I +  A   A+ G  ++L+G NE +L  VA+ +     G QP     LD+ 
Sbjct: 7   ILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHI-NEEGGRQPQ-WFILDLL 64

Query: 67  EDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLL 126
                   +   +       LD  +H     G +    +     ++ + ++N  A + L 
Sbjct: 65  TCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATFMLT 124

Query: 127 KAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIR 186
           +A+   + +S AG S+VF +S +G +     GA  Y     +   L +  A E  +  +R
Sbjct: 125 QALLPLLLKSDAG-SLVFTSSSVGRQGRANWGA--YAVSKFATEGLXQVLADEYQQRNLR 181

Query: 187 VNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
           VN I  G                        P    L    D+    ++L+ D SR  TG
Sbjct: 182 VNCINPG---------GTRTAMRASAFPTEDPQK--LKTPADIMPLYLWLMGDDSRRKTG 230

Query: 247 TT 248
            T
Sbjct: 231 MT 232

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 58.2 bits (141), Expect = 4e-10
 Identities = 60/261 (22%), Positives = 111/261 (42%), Gaps = 31/261 (11%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
             K +L+T     I   +A  LA+ G  +++      R      K+      G       
Sbjct: 8   AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE---GIKAHAAP 64

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFV--------HCYTYEGKMQDPLQVGEDEFKKL 114
            ++   +E   + A++   + +G +D  +        H +T         +  E E+  +
Sbjct: 65  FNVTHKQE--VEAAIEHIEKDIGPIDVLINNAGIQRRHPFT---------EFPEQEWNDV 113

Query: 115 VKINFVAPWFLLKAVGRRMKESKAGG--SIVFLTSIIGAERGLYPGAAAYGACAASIHQL 172
           + +N  A + + +AV R M + +AG   +I  + S +G +  + P AA+ GA    +  L
Sbjct: 114 IAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDT-ITPYAASKGA----VKML 168

Query: 173 VRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAST 232
            R   +E+ +H I+VNGIA G    +     V  E     + +  P  RW D + +L   
Sbjct: 169 TRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQ-ELIGA 227

Query: 233 VIYLISDGSRYMTGTTIYVDG 253
            ++L S  S ++ G  ++VDG
Sbjct: 228 AVFLSSKASDFVNGHLLFVDG 248

Length = 254

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 58.2 bits (141), Expect = 4e-10
 Identities = 57/263 (21%), Positives = 107/263 (40%), Gaps = 25/263 (9%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEV 60
           M+   + VL+T     +   IA   A+ G R+V+  N  +    AE +   L G + + +
Sbjct: 1   MQISEQTVLVTGGSRGLGAAIARAFAREGARVVV--NYHQSEDAAEALADEL-GDRAIAL 57

Query: 61  VGLDMEEDREGAFDEAVDKACQILGN-LDAFVHC----YTYEGKMQDPLQ-VGEDEFKKL 114
              D+  DRE         A +  G  +   V+     ++++G  +     +  ++F++ 
Sbjct: 58  QA-DVT-DRE-QVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQ 114

Query: 115 VKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA----YGACAASIH 170
           ++ +       ++A    M+E   G        II     L+         Y    A++ 
Sbjct: 115 LEGSVKGALNTIQAALPGMREQGFG-------RIINIGTNLFQNPVVPYHDYTTAKAALL 167

Query: 171 QLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLA 230
            L R  A E+G + I VN ++ GL L+     A   +    L+    PL + +    + A
Sbjct: 168 GLTRNLAAELGPYGITVNMVSGGL-LRTTDASAATPDEVFDLIAATTPLRK-VTTPQEFA 225

Query: 231 STVIYLISDGSRYMTGTTIYVDG 253
             V++  S  +R +TG  + VDG
Sbjct: 226 DAVLFFASPWARAVTGQNLVVDG 248

Length = 253

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 58.4 bits (142), Expect = 4e-10
 Identities = 55/189 (29%), Positives = 86/189 (45%), Gaps = 21/189 (11%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
           K  L+T  S G  I   +A  LA+RG  L+LV   E +L ++A+++    K G  VEV+ 
Sbjct: 7   KTALITGASSG--IGAELAKQLARRGYNLILVARREDKLEALAKEL--EDKTGVEVEVIP 62

Query: 63  LDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFV 120
            D+   E  E   DE  ++   I    D  V+   + G     L++  DE ++++++N +
Sbjct: 63  ADLSDPEALERLEDELKERGGPI----DVLVNNAGF-GTFGPFLELSLDEEEEMIQLNIL 117

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA--AAYGACAASIHQLVRTAAM 178
           A   L KAV   M E  AG  I+ + S      GL P    A Y A  A +         
Sbjct: 118 ALTRLTKAVLPGMVERGAGH-IINIGSAA----GLIPTPYMAVYSATKAFVLSFSEALRE 172

Query: 179 EIGKHKIRV 187
           E+    ++V
Sbjct: 173 ELKGTGVKV 181

Length = 265

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 58.0 bits (141), Expect = 5e-10
 Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 19/186 (10%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
           K VL+T  S G  I   +A  LA +G R++     R    + E +   L     +EV+ L
Sbjct: 1   KVVLITGCSSG--IGLALALALAAQGYRVI--ATARNPDKL-ESLGELLNDN--LEVLEL 53

Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVA 121
           D+ +  E +   AV +  +  G +D  V+   Y   G +++      +E ++L ++N   
Sbjct: 54  DVTD--EESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEE---TSIEEVRELFEVNVFG 108

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
           P  + +A    M++    G IV ++S+ G      P    Y A  A++  L  +  +E+ 
Sbjct: 109 PLRVTRAFLPLMRKQG-SGRIVNVSSVAG--LVPTPFLGPYCASKAALEALSESLRLELA 165

Query: 182 KHKIRV 187
              I+V
Sbjct: 166 PFGIKV 171

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 57.8 bits (140), Expect = 6e-10
 Identities = 57/265 (21%), Positives = 100/265 (37%), Gaps = 31/265 (11%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           +  L+T     I   IA      G  +++V  +    + A   +      + V  +  D+
Sbjct: 10  QTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADV 69

Query: 66  --EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
             +EDR    D   D        L   V+      +    +   EDE++ + + N  + +
Sbjct: 70  SDDEDRRAILDWVEDHW----DGLHILVNNAGGNIRKA-AIDYTEDEWRGIFETNLFSAF 124

Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 183
            L +     +K+  +  +IV + S+ G         A YG   A++ Q+ R  A+E  + 
Sbjct: 125 ELSRYAHPLLKQHASS-AIVNIGSVSGLTH--VRSGAPYGMTKAALLQMTRNLAVEWAED 181

Query: 184 KIRVNGIARG----------LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTV 233
            IRVN +A            L   D Y          + V E  P+ R +    ++A+ V
Sbjct: 182 GIRVNAVAPWYIRTPLTSGPLSDPDYY----------EQVIERTPMRR-VGEPEEVAAAV 230

Query: 234 IYLISDGSRYMTGTTIYVDGAQSIT 258
            +L    + Y+TG  I VDG     
Sbjct: 231 AFLCMPAASYITGQCIAVDGGFLRY 255

Length = 257

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 57.4 bits (139), Expect = 8e-10
 Identities = 65/256 (25%), Positives = 110/256 (42%), Gaps = 19/256 (7%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKM-MGSLKGGQPVEVVGLD 64
           K V++T  G  I + IA  LAK G  +V V  ++R   + E + M    GG+ +  V  D
Sbjct: 7   KVVVVTGSGRGIGRAIAVRLAKEGSLVV-VNAKKRAEEMNETLKMVKENGGEGI-GVLAD 64

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           +   REG  +          G  D  V+     G     L V +    K +  +F +  +
Sbjct: 65  VST-REGC-ETLAKATIDRYGVADILVNNAGL-GLFSPFLNVDDKLIDKHISTDFKSVIY 121

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
             + + + M+E   GG+IV + S+ G       G + YGA  A++  L +  A+E+   K
Sbjct: 122 CSQELAKEMRE---GGAIVNIASVAGIRP--AYGLSIYGAMKAAVINLTKYLALEL-APK 175

Query: 185 IRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 241
           IRVN IA G     L +     +G     +   +   + + LD   ++A  V  ++    
Sbjct: 176 IRVNAIAPGFVKTKLGESLFKVLGMSEK-EFAEKFTLMGKILD-PEEVAEFVAAILK--I 231

Query: 242 RYMTGTTIYVDGAQSI 257
             +TG    +D  +S+
Sbjct: 232 ESITGQVFVLDSGESL 247

Length = 252

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 57.5 bits (139), Expect = 8e-10
 Identities = 62/259 (23%), Positives = 113/259 (43%), Gaps = 34/259 (13%)

Query: 8   VLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEE 67
           V++T     I + +A HL + G  ++         ++    +  L+ G P+ +  LD+ +
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVI---------ALDLPFVLLLEYGDPLRLTPLDVAD 51

Query: 68  DREGAFDEAVDKACQILGNLDAFVHCY-TYEGKMQDPLQVGEDEFKKLVKINFVAPWFLL 126
               A  E   +     G +DA V+C         DPL    +++++   +N    + LL
Sbjct: 52  AA--AVREVCSRLLAEHGPIDALVNCAGVLRPGATDPLST--EDWEQTFAVNVTGVFNLL 107

Query: 127 KAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIR 186
           +AV   MK+ +  G+IV + S   A        AAYGA  A++  L +   +E+  + +R
Sbjct: 108 QAVAPHMKDRR-TGAIVTVAS--NAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVR 164

Query: 187 VNGIARG--------LHLQDEYPIAVGQERAVKLVREA----APLHRWLDVKNDLASTVI 234
            N ++ G            DE     G  + +  V E      PL + +    D+A+ V+
Sbjct: 165 CNVVSPGSTDTAMQRTLWHDED----GAAQVIAGVPEQFRLGIPLGK-IAQPADIANAVL 219

Query: 235 YLISDGSRYMTGTTIYVDG 253
           +L SD + ++T   + VDG
Sbjct: 220 FLASDQAGHITMHDLVVDG 238

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 57.1 bits (138), Expect = 8e-10
 Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 18/158 (11%)

Query: 102 DPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA 161
           D L++  D+  +L KIN  AP+       R+M E   GG I+ + S+ G +R    G AA
Sbjct: 90  DALELDADDIDRLFKINIHAPYHASVEAARQMPE---GGRIIIIGSVNG-DRMPVAGMAA 145

Query: 162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHR 221
           Y A  +++  + R  A + G   I +N +  G    D  P A G  + +        +H 
Sbjct: 146 YAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANP-ANGPMKDM--------MHS 196

Query: 222 WLDVK-----NDLASTVIYLISDGSRYMTGTTIYVDGA 254
           ++ +K      ++A  V +L    + ++TG    +DGA
Sbjct: 197 FMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGA 234

Length = 237

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 57.3 bits (139), Expect = 1e-09
 Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 28/247 (11%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFDEAV 77
           +A   A+ G  +VL      RL  VA ++      G+    V  D+  E+        A+
Sbjct: 21  LAVRAARAGADVVLAARTAERLDEVAAEIDD---LGRRALAVPTDITDEDQCANLVALAL 77

Query: 78  DKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 137
           ++     G +DA V+       M+         ++ ++++N +    L +A    + ES 
Sbjct: 78  ER----FGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES- 132

Query: 138 AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL--- 194
            GGSIV + S+    R   P   AY     ++    ++ A E+G   IRVN +A G    
Sbjct: 133 -GGSIVMINSM--VLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWG 189

Query: 195 --------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
                   H   +Y + V Q  A       + L R L   +++AS V++L SD +R +TG
Sbjct: 190 DPLKGYFRHQAGKYGVTVEQIYAE--TAANSDLKR-LPTDDEVASAVLFLASDLARAITG 246

Query: 247 TTIYVDG 253
            T+ V+ 
Sbjct: 247 QTLDVNC 253

Length = 258

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 58/247 (23%), Positives = 96/247 (38%), Gaps = 40/247 (16%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEED--------REG 71
           +A   A  G R+ +   +  RL++ A     +L GG PV    LD+ ++          G
Sbjct: 13  LARAFAAEGARVTIASRSRDRLAAAA----RALGGGAPVRTAALDITDEAAVDAFFAEAG 68

Query: 72  AFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 131
            FD  V  A    G                    +     +  +   F   + + +A   
Sbjct: 69  PFDHVVITAADTPGGP---------------VRALPLAAAQAAMDSKFWGAYRVARAA-- 111

Query: 132 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 191
           R+     GGS+ F  S   A R         GA  A++  L R  A+E+    +RVN ++
Sbjct: 112 RIAP---GGSLTF-VSGFAAVRPS-ASGVLQGAINAALEALARGLALELAP--VRVNTVS 164

Query: 192 RGLHLQDEYPIAVGQERAVKLVREAAPL-HRWLDVKNDLASTVIYLISDGSRYMTGTTIY 250
            GL     +    G  R       A  L  R +    D+A+ +++L ++G  + TG+T+ 
Sbjct: 165 PGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAANG--FTTGSTVL 222

Query: 251 VDGAQSI 257
           VDG  +I
Sbjct: 223 VDGGHAI 229

Length = 230

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 46/207 (22%), Positives = 85/207 (41%), Gaps = 20/207 (9%)

Query: 52  LKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFV--HCYTYEGKMQDPLQVGED 109
              G   E + +D+ +    A +       + LG+    +    Y+   +++   ++  +
Sbjct: 63  ESYGVRCEHMEIDLSQPY--APNRVFYAVSERLGDPSILINNAAYSTHTRLE---ELTAE 117

Query: 110 EFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASI 169
           +  K   +N  A   L  A  ++  + KAGG I+ LTS  G   G  P   AY A   +I
Sbjct: 118 QLDKHYAVNVRATMLLSSAFAKQY-DGKAGGRIINLTS--GQSLGPMPDELAYAATKGAI 174

Query: 170 HQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKLVREAAPLHRWLDVKN 227
               ++ A E+ +  I VN +  G       P   G   E     +    P  R  +   
Sbjct: 175 EAFTKSLAPELAEKGITVNAVNPG-------PTDTGWITEELKHHLVPKFPQGRVGEPV- 226

Query: 228 DLASTVIYLISDGSRYMTGTTIYVDGA 254
           D A  + +L+S+ ++++TG  I+ +G 
Sbjct: 227 DAARLIAFLVSEEAKWITGQVIHSEGG 253

Length = 256

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 56.7 bits (137), Expect = 2e-09
 Identities = 62/263 (23%), Positives = 110/263 (41%), Gaps = 27/263 (10%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           K  L+T     I   IA  LA  G  +VL  N    ++  E +   L     V+V+    
Sbjct: 3   KVALVTGSTSGIGLGIARALAAAGANIVL--NGFGDAAEIEAVRAGLAAKHGVKVLYHGA 60

Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGE---DEFKKLVKINFVAP 122
           +  +  A ++ V  A +  G +D  V+       +Q    + +   +++  ++ +N  A 
Sbjct: 61  DLSKPAAIEDMVAYAQRQFGGVDILVN----NAGIQHVAPIEDFPTEKWDAIIALNLSAV 116

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL--YPGAAAYGACAASIHQLVRTAAMEI 180
           +   +     MK+ +  G I+ + S+     GL      +AY A    +  L +  A+E 
Sbjct: 117 FHTTRLALPHMKK-QGWGRIINIASV----HGLVASANKSAYVAAKHGVVGLTKVVALET 171

Query: 181 GKHKIRVNGIARGLHLQD--EYPIA-------VGQERAVK-LVREAAPLHRWLDVKNDLA 230
               +  N I  G  L    E  I+       V QE+A + L+ E  P  +++  +  L 
Sbjct: 172 AGTGVTCNAICPGWVLTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQFVTPE-QLG 230

Query: 231 STVIYLISDGSRYMTGTTIYVDG 253
            T ++L SD +  +TGT + VDG
Sbjct: 231 DTAVFLASDAASQITGTAVSVDG 253

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 56.3 bits (136), Expect = 2e-09
 Identities = 58/257 (22%), Positives = 101/257 (39%), Gaps = 19/257 (7%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVL--VGNERRLSSVAEKMMGSLKGGQPV 58
           M    K  ++T     I   IA  LA  G  + +   G+      +  ++  +  GG+ +
Sbjct: 1   MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA--GGRAI 58

Query: 59  EVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ-DPLQVGEDE-FKKLVK 116
            V   D+ +    A     D A    G +D  V+     G M    +   + E F + + 
Sbjct: 59  AVQA-DVAD--AAAVTRLFDAAETAFGRIDVLVNN---AGVMPLGTIADFDLEDFDRTIA 112

Query: 117 INFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTA 176
            N    + +L+   R + +   GG I+ L++         PG   Y A  A++  LV   
Sbjct: 113 TNLRGAFVVLREAARHLGQ---GGRIINLST--SVIALPLPGYGPYAASKAAVEGLVHVL 167

Query: 177 AMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL 236
           A E+    I VN +A G    + +      E+  +L    APL R L    ++A+ V +L
Sbjct: 168 ANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAG-LAPLER-LGTPEEIAAAVAFL 225

Query: 237 ISDGSRYMTGTTIYVDG 253
                 ++ G  + V+G
Sbjct: 226 AGPDGAWVNGQVLRVNG 242

Length = 245

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 56.1 bits (135), Expect = 2e-09
 Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 13/181 (7%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
             K +L+T     + + +A   A  G  ++LV  ++++L  V + ++ +  G      + 
Sbjct: 5   SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEA--GHPEPFAIR 62

Query: 63  LDMEEDREGAFDE-AVDKACQILGNLDAFVHCYTYEGKMQDPLQVGE-DEFKKLVKINFV 120
            D+    E  F++ A   A    G LD  VHC  Y   +  PL      E+    +IN V
Sbjct: 63  FDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALS-PLDFQTVAEWVNQYRINTV 121

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA--AAYGACAASIHQLVRTAAM 178
           AP  L +A+   +K+S    S++F    +G   G  P A    +GA  A+++ L + AA 
Sbjct: 122 APMGLTRALFPLLKQS-PDASVIF----VGESHGETPKAYWGGFGASKAALNYLCKVAAD 176

Query: 179 E 179
           E
Sbjct: 177 E 177

Length = 239

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 17/128 (13%)

Query: 137 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL 196
             GGS+    S  GAE+ +       G   A++   VR  A E+G   IRV+ I+ G   
Sbjct: 139 TNGGSL-LTMSYYGAEK-VVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPG--- 193

Query: 197 QDEYPI----AVGQERAVKLVREA---APLHRWLDVKNDLASTVIYLISDGSRYMTGTTI 249
               P+    A G +    L+ +A   APL R +D+ +D+ +   +L SD +R +TG T+
Sbjct: 194 ----PLKTRAASGIDDFDALLEDAAERAPLRRLVDI-DDVGAVAAFLASDAARRLTGNTL 248

Query: 250 YVDGAQSI 257
           Y+DG   I
Sbjct: 249 YIDGGYHI 256

Length = 258

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 56.0 bits (135), Expect = 3e-09
 Identities = 60/266 (22%), Positives = 115/266 (43%), Gaps = 32/266 (12%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
           + K V++T     I + +A  LA  G R++LV     +  V  +++ +   G    V   
Sbjct: 3   EGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSELVHEVLAEILAA---GDAAHVHTA 59

Query: 64  DMEE--DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQ-VGEDEFKKLVKINFV 120
           D+E     +G    AV++     G +D  ++          P +   E++ +  ++ +  
Sbjct: 60  DLETYAGAQGVVRAAVER----FGRVDVLINNVG-GTIWAKPYEHYEEEQIEAEIRRSLF 114

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
              +  +AV   M E + G  IV ++SI  A RG+Y     Y A    ++ L  + A E 
Sbjct: 115 PTLWCCRAVLPHMLERQQG-VIVNVSSI--ATRGIY--RIPYSAAKGGVNALTASLAFEH 169

Query: 181 GKHKIRVNGIARG-------------LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKN 227
            +  IRVN +A G               + ++    V  +R V    +++ + R+  + +
Sbjct: 170 ARDGIRVNAVAPGGTEAPPRKIPRNAAPMSEQEK--VWYQRIVDQTLDSSLMGRYGTI-D 226

Query: 228 DLASTVIYLISDGSRYMTGTTIYVDG 253
           +    +++L SD + Y+TGT + V G
Sbjct: 227 EQVRAILFLASDEASYITGTVLPVGG 252

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 55.7 bits (134), Expect = 3e-09
 Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 7/182 (3%)

Query: 75  EAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 134
           E VD   Q  G +D  V        M       E + ++  +   + P+ LL+A   +MK
Sbjct: 61  ELVDAVLQAGGAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFALLQAAIAQMK 120

Query: 135 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG- 193
           ++  GGSI+F+TS +   +      + YG   A+   L  + A E+ +  I V  I    
Sbjct: 121 KAG-GGSIIFITSAVP--KKPLAYNSLYGPARAAAVALAESLAKELSRDNILVYAIGPNF 177

Query: 194 LHLQDEYPIAVGQE--RAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 251
            +    +P +  +      + V+   PL R L   +++ + V +L S  +  +TG     
Sbjct: 178 FNSPTYFPTSDWENNPELRERVKRDVPLGR-LGRPDEMGALVAFLASRRADPITGQFFAF 236

Query: 252 DG 253
            G
Sbjct: 237 AG 238

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 55.6 bits (134), Expect = 4e-09
 Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 30/265 (11%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEV 60
           +EN  K  ++T     I +  A  LA+ G  ++ V     +S   +K+      G   + 
Sbjct: 4   LEN--KVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIK---SNGGKAKA 58

Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGE---DEFKKLVKI 117
             +D+ +++     +   +  +  G +D     +   G      ++ E   D F K++ +
Sbjct: 59  YHVDISDEQ--QVKDFASEIKEQFGRVDVL---FNNAGVDNAAGRIHEYPVDVFDKIMAV 113

Query: 118 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAA 177
           +    + + K +   M E   GGSI+  +S  G    LY   + Y A   ++    ++ A
Sbjct: 114 DMRGTFLMTKMLLPLMMEQ--GGSIINTSSFSGQAADLY--RSGYNAAKGAVINFTKSIA 169

Query: 178 MEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREA----APLHRWLDVKND 228
           +E G+  IR N IA G     E P+        ++ A K  RE      PL R L    +
Sbjct: 170 IEYGRDGIRANAIAPG---TIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGR-LGKPEE 225

Query: 229 LASTVIYLISDGSRYMTGTTIYVDG 253
           +A  V++L SD S ++TG TI +DG
Sbjct: 226 VAKLVVFLASDDSSFITGETIRIDG 250

Length = 272

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 55.0 bits (133), Expect = 6e-09
 Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 23/170 (13%)

Query: 102 DPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAG-----GSIVFLTSI----IGAE 152
           D L +  + F +++ IN   P+FL +AV +RM            SIVF++S+    +   
Sbjct: 97  DLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPN 156

Query: 153 RGLYPGAAAYGACA--ASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV 210
           RG Y        C   A +    +  A  + +  I V  +  GL ++ +    V   +  
Sbjct: 157 RGEY--------CISKAGLSMAAQLFAARLAEEGIGVYEVRPGL-IKTDMTAPV-TAKYD 206

Query: 211 KLVREA-APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 259
            L+ +   P+ RW     D+A  V  L S    Y TG  I+VDG  SI R
Sbjct: 207 ALIAKGLVPMPRW-GEPEDVARAVAALASGDLPYSTGQAIHVDGGLSIPR 255

Length = 256

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 55.0 bits (133), Expect = 6e-09
 Identities = 49/195 (25%), Positives = 81/195 (41%), Gaps = 29/195 (14%)

Query: 75  EAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 134
           +AV++  + LG LD  V+   ++   Q    +  ++  K  K N  + + + KA    +K
Sbjct: 113 DAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLK 172

Query: 135 ESKAGGSIVFLTSIIGAERGLYPGAAA---YGACAASIHQLVRTAAMEIGKHKIRVNGIA 191
           +   G +I+   SI G     Y G      Y A   +IH   R+ A  + +  IRVN +A
Sbjct: 173 Q---GSAIINTGSITG-----YEGNETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVA 224

Query: 192 RG-----LHLQDEYPIAV---GQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
            G     L   D     V   G    ++  R   P         +LA   ++L S  S Y
Sbjct: 225 PGPIWTPLIPSDFDEEKVSQFGSNTPMQ--RPGQP--------EELAPAYVFLASPDSSY 274

Query: 244 MTGTTIYVDGAQSIT 258
           +TG  ++V+G   + 
Sbjct: 275 ITGQMLHVNGGVIVN 289

Length = 290

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 54.4 bits (131), Expect = 8e-09
 Identities = 52/154 (33%), Positives = 70/154 (45%), Gaps = 16/154 (10%)

Query: 108 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA-----Y 162
           E+++ K++KIN     +        +K SK  G+IV + S  G       G AA     Y
Sbjct: 100 EEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGI------GTAAEGTTFY 152

Query: 163 GACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL---VREAAPL 219
               A I  L R  A E+GK+ IRVN +A G    D       QE A KL    R    L
Sbjct: 153 AITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVL 212

Query: 220 HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 253
                   D+A+ V++L SD +RY+TG  I  DG
Sbjct: 213 KT-TGKPEDIANIVLFLASDDARYITGQVIVADG 245

Length = 255

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 54.4 bits (131), Expect = 8e-09
 Identities = 57/254 (22%), Positives = 104/254 (40%), Gaps = 18/254 (7%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           + VL+T     +   IA   A+ G R+V+  N  R +  AE +     G + + +     
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVV--NYYRSTESAEAVAAEA-GERAIAIQADVR 57

Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDE------FKKLVKINF 119
           + D        +++A    G +D  V+    +    DP Q    +      +++ ++   
Sbjct: 58  DRD---QVQAMIEEAKNHFGPVDTIVNNALIDFPF-DPDQRKTFDTIDWEDYQQQLEGAV 113

Query: 120 VAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME 179
                LL+AV    KE  +G  I   T++   +  + P    Y    A++    R  A E
Sbjct: 114 KGALNLLQAVLPDFKERGSGRVINIGTNL--FQNPVVP-YHDYTTAKAALLGFTRNMAKE 170

Query: 180 IGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD 239
           +G + I VN ++ GL L+     A   +     + +  PL   +    D+A  V++  S 
Sbjct: 171 LGPYGITVNMVSGGL-LKVTDASAATPKEVFDAIAQTTPL-GKVTTPQDIADAVLFFASP 228

Query: 240 GSRYMTGTTIYVDG 253
            +R +TG  + VDG
Sbjct: 229 WARAVTGQNLVVDG 242

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 63/269 (23%), Positives = 120/269 (44%), Gaps = 34/269 (12%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVE 59
           M+ + K +++T     + + +A +LA++G +L L+  N+ +L   A    G+L       
Sbjct: 1   MDLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLE-EAVAECGALGTEVRGY 59

Query: 60  VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCY----------TYEGKMQDPLQVGED 109
              +  EED E  F +      +  G L+  ++              +GK+   + +  +
Sbjct: 60  AANVTDEEDVEATFAQIA----EDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSL--E 113

Query: 110 EFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASI 169
           +F+ ++ +N    +   +    +M ES + G I+ ++SI    R    G   Y A  A +
Sbjct: 114 QFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSI---ARAGNMGQTNYSASKAGV 170

Query: 170 HQLVRTAAMEIGKHKIRVNGIARGL----HLQDEYPIAVGQERAVKLVREAAPLHRWLDV 225
             +  T A E+ ++ IRV  IA G+          P A+  ER  K++    P+ R L  
Sbjct: 171 AAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEAL--ERLEKMI----PVGR-LGE 223

Query: 226 KNDLASTVIYLISDGSRYMTGTTIYVDGA 254
             ++A TV ++I   + Y+TG  + +DG 
Sbjct: 224 PEEIAHTVRFIIE--NDYVTGRVLEIDGG 250

Length = 253

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 52.6 bits (127), Expect = 3e-08
 Identities = 47/191 (24%), Positives = 92/191 (48%), Gaps = 12/191 (6%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
           + + +L+T  GD I +  A   A+ G  ++L+G  E +L +V +++  +  GG    ++ 
Sbjct: 11  KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAA--GGPQPAIIP 68

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
           LD+       + +  D   +  G LD  +H     G++    Q   + ++ ++++N  A 
Sbjct: 69  LDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNAT 128

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS---IHQLVRTAAME 179
           + L +A+   + +S A  S+VF +S +G +     G A +GA A S      +++  A E
Sbjct: 129 FMLTQALLPLLLKSPA-ASLVFTSSSVGRQ-----GRANWGAYAVSKFATEGMMQVLADE 182

Query: 180 IGKHKIRVNGI 190
                +RVN I
Sbjct: 183 YQGTNLRVNCI 193

Length = 247

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 52.7 bits (127), Expect = 3e-08
 Identities = 63/264 (23%), Positives = 117/264 (44%), Gaps = 34/264 (12%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K +L+T  G  I   +   + + G  ++    ++  L+ + E  +G     + + +V LD
Sbjct: 5   KTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLE-SLGKEFKSKKLSLVELD 63

Query: 65  M--EEDREGAFDEAVDKACQILGNLDAFVHC-Y----TYEGKMQDPLQVGEDEFKKLVKI 117
           +  +E  E    ++ +K     G +D  V+C Y     Y  K  D   V  D+F + + +
Sbjct: 64  ITDQESLEEFLSKSAEK----YGKIDGAVNCAYPRNKDYGKKFFD---VSLDDFNENLSL 116

Query: 118 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSI--IGAER-GLYPGAA-----AYGACAASI 169
           +  + +   +   +  K+   GG++V ++SI  + A +  +Y G +      Y A  A I
Sbjct: 117 HLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGI 175

Query: 170 HQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERA-VKLVREAAPLHRWLDVKND 228
             L +  A       IRVN ++ G        I   Q  A +   ++       LD  +D
Sbjct: 176 IHLTKYLAKYFKDSNIRVNCVSPG-------GILDNQPEAFLNAYKKCCNGKGMLDP-DD 227

Query: 229 LASTVIYLISDGSRYMTGTTIYVD 252
           +  T+++L+SD S+Y+TG  I VD
Sbjct: 228 ICGTLVFLLSDQSKYITGQNIIVD 251

Length = 256

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 52.7 bits (127), Expect = 3e-08
 Identities = 36/166 (21%), Positives = 69/166 (41%), Gaps = 11/166 (6%)

Query: 17  ISKNIAFHLAKRG--CRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAF 73
           I + +A  L KRG    +VL+  +E  L  + E++   L+    V  V  D+ +      
Sbjct: 11  IGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRPGLR----VTTVKADLSD--AAGV 64

Query: 74  DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 133
           ++ ++   ++ G  D  ++     G +     +  DE +K   +N  +P  L   + R  
Sbjct: 65  EQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCLTSTLLRAF 124

Query: 134 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME 179
           K+     ++V ++S  GA    + G   Y +  A+     R  A E
Sbjct: 125 KKRGLKKTVVNVSS--GAAVNPFKGWGLYCSSKAARDMFFRVLAAE 168

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 52.6 bits (127), Expect = 4e-08
 Identities = 66/273 (24%), Positives = 119/273 (43%), Gaps = 38/273 (13%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG-- 62
           K  ++T  G  +   +A  LA+ G ++ ++  N+ +  +V  ++     GG+ + V    
Sbjct: 11  KVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEI--KAAGGEALAVKADV 68

Query: 63  LDMEEDREGAFDEAVDK--ACQIL-----GNL-DAFVHCYTYEG--KMQDPLQVGEDEFK 112
           LD +E  E A  + ++    C IL     GN   A      +E     +    + E+ F+
Sbjct: 69  LD-KESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFE 127

Query: 113 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 172
            +  +N +      +   + M   K GG+I+ ++S+  A   L     AY A  A+I   
Sbjct: 128 FVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINISSM-NAFTPL-TKVPAYSAAKAAISNF 184

Query: 173 VRTAAMEIGKHKIRVNGIA---------RGLHLQDEYPIAVGQ--ERAVKLVREAAPLHR 221
            +  A+   K  IRVN IA         R L   ++     G   ERA K++    P+ R
Sbjct: 185 TQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNED-----GSLTERANKIL-AHTPMGR 238

Query: 222 WLDVKNDLASTVIYLISD-GSRYMTGTTIYVDG 253
           +   + +L  T+++L  +  S ++TG  + VDG
Sbjct: 239 FGKPE-ELLGTLLWLADEKASSFVTGVVLPVDG 270

Length = 278

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 51.0 bits (123), Expect = 6e-08
 Identities = 41/177 (23%), Positives = 70/177 (39%), Gaps = 15/177 (8%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKG-GQPVEVVGLD 64
             VL+T     +   +A  LA  G R +++ + R  +  A +++  L+  G  V V   D
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACD 60

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAP 122
           +  DR+ A    +      LG LD  VH     G + D    ++  + F++++       
Sbjct: 61  V-ADRD-ALAALLAALPAALGPLDGVVHN---AGVLDDGPLEELTPERFERVLAPKVTGA 115

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME 179
           W L +            G+ V  +S+ G      PG A Y A  A++  L      E
Sbjct: 116 WNLHELTRDL-----DLGAFVLFSSVAGVLGS--PGQANYAAANAALDALAEHRRAE 165

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 51.8 bits (124), Expect = 6e-08
 Identities = 38/157 (24%), Positives = 78/157 (49%), Gaps = 12/157 (7%)

Query: 104 LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG 163
           +++ ++++  ++++N  A + L + +   M   + G  I+ +TS++G      PG A Y 
Sbjct: 97  VRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYG-RIINITSVVGVTGN--PGQANYC 153

Query: 164 ACAASIHQLVRTAAMEIGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLH 220
           A  A +    ++ A EI    + VN +A G     +  +       ++  + +  A P+ 
Sbjct: 154 ASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKL-----NDKQKEAIMGAIPMK 208

Query: 221 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 257
           R +    ++AS V YL S  + Y+TG TI+V+G  ++
Sbjct: 209 R-MGTGAEVASAVAYLASSEAAYVTGQTIHVNGGMAM 244

Length = 245

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 52.0 bits (125), Expect = 6e-08
 Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 26/201 (12%)

Query: 69  REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL-LK 127
            E  +   + +A   +G L   V+     G      Q+  DE+++++ IN V   FL  K
Sbjct: 62  DEAQWQALLAQAADAMGGLSVLVNNAGV-GSFGAIEQIELDEWRRVMAIN-VESIFLGCK 119

Query: 128 AVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRV 187
                ++ S+   SIV ++S+   +    P   AY A  A++  L ++ A++  +  + V
Sbjct: 120 HALPYLRASQPA-SIVNISSVAAFKAE--PDYTAYNASKAAVASLTKSIALDCARRGLDV 176

Query: 188 -----------NGIARGLHLQDEYPIAVGQERAV-KLVREAAPLHRWLDVKNDLASTVIY 235
                       GI   +  +      +G+E A  KL R   PL R L   +D+A  V+Y
Sbjct: 177 RCNSIHPTFIRTGIVDPIFQR------LGEEEATRKLARGV-PLGR-LGEPDDVAHAVLY 228

Query: 236 LISDGSRYMTGTTIYVDGAQS 256
           L SD SR++TG  + +DG   
Sbjct: 229 LASDESRFVTGAELVIDGGIC 249

Length = 251

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 51.4 bits (123), Expect = 1e-07
 Identities = 76/257 (29%), Positives = 112/257 (43%), Gaps = 34/257 (13%)

Query: 18  SKNIAFH----LAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEV----VGLDMEED 68
           SK I F     LA+ G  ++L+  NE  L    EK    +K    V+V      L   ED
Sbjct: 17  SKGIGFGVARVLARAGADVILLSRNEENLKKAREK----IKSESNVDVSYIVADLTKRED 72

Query: 69  REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKA 128
            E    E  +     +G  D F    T   K    +++  ++++  VK+      +L +A
Sbjct: 73  LERTVKELKN-----IGEPDIFFFS-TGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRA 126

Query: 129 VGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVN 188
           +   M E K  G I++ TS+  A +   P  A       S+  LVRT A E+G   I VN
Sbjct: 127 LVPAM-ERKGFGRIIYSTSV--AIKEPIPNIALSNVVRISMAGLVRTLAKELGPKGITVN 183

Query: 189 GIARGLHLQDEYPIAVGQERAV---KLVREA-------APLHRWLDVKNDLASTVIYLIS 238
           GI  G+ ++ +  I + Q+RA    K V EA        PL R L    ++   V +L S
Sbjct: 184 GIMPGI-IRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGR-LGEPEEIGYLVAFLAS 241

Query: 239 DGSRYMTGTTIYVDGAQ 255
           D   Y+ G  I VDG +
Sbjct: 242 DLGSYINGAMIPVDGGR 258

Length = 263

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 50.8 bits (122), Expect = 1e-07
 Identities = 50/191 (26%), Positives = 77/191 (40%), Gaps = 18/191 (9%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           K  L+T     I   IA  LA+ G R+ L           E +      G  VE V  D 
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRN------PEDLAALSASGGDVEAVPYDA 54

Query: 66  EE-DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ--DPLQVGEDEFKKLVKINFVAP 122
            + +   A  +A+       G +D  VH     G  +     +  + E +    IN +AP
Sbjct: 55  RDPEDARALVDALR---DRFGRIDVLVHN---AGIGRPTTLREGSDAELEAHFSINVIAP 108

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
             L +A+   ++E+   G +VFL S+ G +R L  G A Y A   ++  L      E   
Sbjct: 109 AELTRALLPALREA-GSGRVVFLNSLSG-KRVL-AGNAGYSASKFALRALAHALRQEGWD 165

Query: 183 HKIRVNGIARG 193
           H +RV+ +  G
Sbjct: 166 HGVRVSAVCPG 176

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 69/285 (24%), Positives = 113/285 (39%), Gaps = 70/285 (24%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
             K V++T     I + +A   A  G R+VLV    R   V E        G     +  
Sbjct: 7   AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVD---RSELVHEVAAELRAAGGEALALTA 63

Query: 64  DME--EDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVG------------ED 109
           D+E     + A   AV+      G +D  ++             VG            E+
Sbjct: 64  DLETYAGAQAAMAAAVEA----FGRIDVLIN------------NVGGTIWAKPFEEYEEE 107

Query: 110 EFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY--PGAAAYGACAA 167
           + +  ++ +     +  +AV   M   + GG+IV ++SI  A RG+   P +AA G   A
Sbjct: 108 QIEAEIRRSLFPTLWCCRAVLPHMLA-QGGGAIVNVSSI--ATRGINRVPYSAAKGGVNA 164

Query: 168 SIHQLVRTAAMEIGKHKIRVNGIA------------RGLHLQDEYPIAVGQERA-----V 210
               L  + A E  +H IRVN +A            R    Q E      QE+A     V
Sbjct: 165 ----LTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSE------QEKAWYQQIV 214

Query: 211 KLVREAAPLHRW--LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 253
               +++ + R+  +D   +  + +++L SD + Y+TGT + V G
Sbjct: 215 DQTLDSSLMKRYGTID---EQVAAILFLASDEASYITGTVLPVGG 256

Length = 260

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 50.9 bits (122), Expect = 1e-07
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 12/129 (9%)

Query: 133 MKESKAGGSIVFLTS--IIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 190
           MK  + G  IV + S  I GA         +Y A  +++    RT A+E+ ++ I VN +
Sbjct: 114 MKLREQG-RIVNICSRAIFGA-----LDRTSYSAAKSALVGCTRTWALELAEYGITVNAV 167

Query: 191 ARGLHLQDEYPIA--VGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTT 248
           A G    + +     VG E   K V  + P+ R L    ++A+ + +L+SD + ++TG  
Sbjct: 168 APGPIETELFRQTRPVGSEEE-KRVLASIPMRR-LGTPEEVAAAIAFLLSDDAGFITGQV 225

Query: 249 IYVDGAQSI 257
           + VDG  S+
Sbjct: 226 LGVDGGGSL 234

Length = 234

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 50.5 bits (121), Expect = 2e-07
 Identities = 41/186 (22%), Positives = 68/186 (36%), Gaps = 24/186 (12%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSL-------------KGGQPVEV-VG 62
           I + IA  LAK G  +V+    +  S        SL              GGQ + + V 
Sbjct: 15  IGRAIALRLAKAGATVVVAA--KTASEGDNGSAKSLPGTIEETAEEIEAAGGQALPIVVD 72

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
           +  E+      +  VD+     G LD  V+       +          F  + ++N    
Sbjct: 73  VRDEDQVRALVEATVDQF----GRLDILVN-NAGAIWLSLVEDTPAKRFDLMQRVNLRGT 127

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
           + L +A    M ++  G  I+ ++  +        G  AY A  A + +L    A E+ +
Sbjct: 128 YLLSQAALPHMVKAGQG-HILNISPPLSLRPA--RGDVAYAAGKAGMSRLTLGLAAELRR 184

Query: 183 HKIRVN 188
           H I VN
Sbjct: 185 HGIAVN 190

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 76/276 (27%), Positives = 115/276 (41%), Gaps = 39/276 (14%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRL-VLVGNERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           +  L+T  G  I + +       G R+ VL  +  +L+S+ ++       G  V VV  D
Sbjct: 7   QVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF------GDHVLVVEGD 60

Query: 65  ME--EDREGAFDEAVDKACQILGNLDAFVHC---YTYEGKMQD-PLQVGEDEFKKLVKIN 118
           +    D + A D+ VD      G LD FV     + Y   + D P +  +  F ++  +N
Sbjct: 61  VTSYADNQRAVDQTVDA----FGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVN 116

Query: 119 FVAPWFL-LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA--YGACAASIHQLVRT 175
            V  + L  KA    +K S  GGS++F  S        YPG     Y A   ++  LVR 
Sbjct: 117 -VKGYLLGAKAALPALKAS--GGSMIFTLS----NSSFYPGGGGPLYTASKHAVVGLVRQ 169

Query: 176 AAMEIGKHKIRVNGIARGLHLQD-EYPIAVG-QERAVK-------LVREAAPLHRWLDVK 226
            A E+    IRVNG+A G  + D   P ++G  E ++        ++    PL      +
Sbjct: 170 LAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPE 228

Query: 227 NDLASTVIYLISDG-SRYMTGTTIYVDGAQSITRPR 261
            D     + L S   SR +TG  I  DG   I   R
Sbjct: 229 -DHTGPYVLLASRRNSRALTGVVINADGGLGIRGIR 263

Length = 263

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 49.6 bits (119), Expect = 3e-07
 Identities = 50/268 (18%), Positives = 104/268 (38%), Gaps = 32/268 (11%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEV-VGL 63
           +  ++   G  +   +   LA+ G R+ +   N  + ++VA+++      G         
Sbjct: 3   QVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADA 62

Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQD-PLQVGEDEFKKLVKINFV 120
             E+          +      G +D  V+         + D  L     +F + +++N V
Sbjct: 63  TSEQSVLALSRGVDEI----FGRVDLLVYNAGIAKAAFITDFQLG----DFDRSLQVNLV 114

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSI---IGAERGLYPGAAAYGACAASIHQLVRTAA 177
             +   +   R M      G I+ + S    +G++      AA +G        L ++ A
Sbjct: 115 GYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVG-----LTQSLA 169

Query: 178 MEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL------VREA----APLHRWLDVKN 227
           +++ ++ I V+ +  G  L+     ++  + A KL      V +      PL R  D + 
Sbjct: 170 LDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQ- 228

Query: 228 DLASTVIYLISDGSRYMTGTTIYVDGAQ 255
           D+ + +++  S  + Y TG +I V G Q
Sbjct: 229 DVLNMLLFYASPKASYCTGQSINVTGGQ 256

Length = 259

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 49.9 bits (119), Expect = 4e-07
 Identities = 55/186 (29%), Positives = 76/186 (40%), Gaps = 16/186 (8%)

Query: 9   LLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEE 67
           L+T   D I K  AF LA++G  LVLV  N  +L  V++ +       Q   VV      
Sbjct: 57  LVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVV-----V 111

Query: 68  DREGAFDEAVDKACQILGNLDAFV------HCYTYEGKMQDPLQVGEDEFKKLVKINFVA 121
           D  G  DE V +  + +  LD  V        Y Y        +V E+  K L+K+N   
Sbjct: 112 DFSGDIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFH---EVDEELLKNLIKVNVEG 168

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
              + +AV   M + K  G+I+ + S         P  A Y A  A I Q  R   +E  
Sbjct: 169 TTKVTQAVLPGMLKRKK-GAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYK 227

Query: 182 KHKIRV 187
           K  I V
Sbjct: 228 KSGIDV 233

Length = 320

>gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 49.4 bits (118), Expect = 4e-07
 Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 17/127 (13%)

Query: 139 GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD 198
           GGS++ LT   G    + P     G   A++   VR  A + G   IRVN I+ G     
Sbjct: 138 GGSMLTLT--YGGSTRVMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAG----- 190

Query: 199 EYPI------AVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 251
             P+       +G  RA+    +  +PL R + + +++  + +YL+SD S  +TG   +V
Sbjct: 191 --PVRTLAGAGIGDARAIFSYQQRNSPLRRTVTI-DEVGGSALYLLSDLSSGVTGEIHFV 247

Query: 252 DGAQSIT 258
           D   +I 
Sbjct: 248 DSGYNIV 254

Length = 271

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 49.0 bits (117), Expect = 5e-07
 Identities = 72/258 (27%), Positives = 121/258 (46%), Gaps = 24/258 (9%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSL--KGGQPVEVVGL 63
           K +++T     I    A   A+RG  + L  N  R    AE ++ ++  +GG+ + V   
Sbjct: 3   KVMIITGASRGIGAATALLAAERGYAVCL--NYLRNRDAAEAVVQAIRRQGGEALAVAA- 59

Query: 64  DM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKI---N 118
           D+  E D    F EAVD+    LG LDA V+     G ++  +++ + +  +L +I   N
Sbjct: 60  DVADEADVLRLF-EAVDRE---LGRLDALVN---NAGILEAQMRLEQMDAARLTRIFATN 112

Query: 119 FVAPWFLLKAVGRRM--KESKAGGSIVFLTSIIGAERGLYPGA-AAYGACAASIHQLVRT 175
            V  +   +   +RM  +    GG+IV ++S+  A R   PG    Y A   +I  +   
Sbjct: 113 VVGSFLCAREAVKRMSTRHGGRGGAIVNVSSM--AARLGSPGEYIDYAASKGAIDTMTIG 170

Query: 176 AAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY 235
            A E+    IRVN +  G+ +  E   + G+   V  V+   P+ R      ++A  +++
Sbjct: 171 LAKEVAAEGIRVNAVRPGV-IYTEIHASGGEPGRVDRVKAGIPMGRGGTA-EEVARAILW 228

Query: 236 LISDGSRYMTGTTIYVDG 253
           L+SD + Y TGT I V G
Sbjct: 229 LLSDEASYTTGTFIDVSG 246

Length = 248

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 48.6 bits (116), Expect = 8e-07
 Identities = 55/194 (28%), Positives = 86/194 (44%), Gaps = 25/194 (12%)

Query: 70  EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ---DPLQVGEDEFKKLVKINFVAPWFLL 126
           E + D   +   +  G LD  VH   +  K +     +    D F   + I+     +  
Sbjct: 72  EASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISV----YSF 127

Query: 127 KAVGRRM-KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 185
            AV +R  K    GGSI+ LT   GAE+ + P     G   A++   V+  A+++G   I
Sbjct: 128 TAVAQRAEKLMTDGGSILTLT-YYGAEK-VMPHYNVMGVAKAALEASVKYLAVDLGPKNI 185

Query: 186 RVNGIARGLHLQDEYPI------AVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYLIS 238
           RVN I+ G       PI       +G  R + K     APL R + +  ++  + +YL+S
Sbjct: 186 RVNAISAG-------PIKTLAASGIGDFRYILKWNEYNAPLRRTVTI-EEVGDSALYLLS 237

Query: 239 DGSRYMTGTTIYVD 252
           D SR +TG   +VD
Sbjct: 238 DLSRGVTGEVHHVD 251

Length = 272

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 48.4 bits (116), Expect = 9e-07
 Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 17/170 (10%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K V++T   + I + +A  LA+ G +LVL   NE RL+S+A+++      G    VV  D
Sbjct: 2   KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH---GGEALVVPTD 58

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
           + +    A +  ++ A    G +D  V+    T   +  +   +    F++++++N++  
Sbjct: 59  VSD--AEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLS--VFERVMRVNYLGA 114

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 172
            +   A    +K S+  G IV ++S+ G       G       AAS H L
Sbjct: 115 VYCTHAALPHLKASR--GQIVVVSSLAG-----LTGVPTRSGYAASKHAL 157

Length = 263

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 48.3 bits (115), Expect = 1e-06
 Identities = 53/245 (21%), Positives = 96/245 (39%), Gaps = 30/245 (12%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVG 62
           Q K  L+T     I +  A  LA  G  + +      RL ++A+++     GG+   V+ 
Sbjct: 2   QGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAE--GGK-ALVLE 58

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGED--EFKKLVKINFV 120
           LD+  D +   D AV++  + LG LD  V+     G M        D  ++ +++  N +
Sbjct: 59  LDVT-DEQQV-DAAVERTVEALGRLDILVN---NAGIMLLGPVEDADTTDWTRMIDTNLL 113

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
              +   A        +  G+IV ++S+ G  R     +A Y A    ++        E+
Sbjct: 114 GLMYTTHAALPHHL-LRNKGTIVNISSVAG--RVAVRNSAVYNATKFGVNAFSEGLRQEV 170

Query: 181 GKHKIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTV 233
            +  +RV  I  G        H+         +ER   + +  A          D+A+ V
Sbjct: 171 TERGVRVVVIEPGTVDTELRDHITHTITKEAYEERISTIRKLQA---------EDIAAAV 221

Query: 234 IYLIS 238
            Y ++
Sbjct: 222 RYAVT 226

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 48.3 bits (115), Expect = 1e-06
 Identities = 50/255 (19%), Positives = 107/255 (41%), Gaps = 15/255 (5%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
             K V++T     I + I     + G ++V     E    ++  ++  +  G        
Sbjct: 8   ADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVPCD 67

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
           +  EED +      V++     G +D  V+   +    Q   +    EF+ L+ +N ++ 
Sbjct: 68  VTKEEDIKTLISVTVER----FGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISY 123

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
           +   K     +++S+  G+I+ L+S++G+       AA Y A   +I  + +  A++  +
Sbjct: 124 FLASKYALPHLRKSQ--GNIINLSSLVGSIG--QKQAAPYVATKGAITAMTKALAVDESR 179

Query: 183 HKIRVNGIARG---LHLQDEYPIAVGQERA-VKLVREAAPLHRWLDVKNDLASTVIYLIS 238
           + +RVN I+ G     L +E         A +K    A  L R +  + +     ++L +
Sbjct: 180 YGVRVNCISPGNIWTPLWEELAAQTPDTLATIKEGELAQLLGR-MGTEAESGLAALFLAA 238

Query: 239 DGSRYMTGTTIYVDG 253
           + + + TG  + + G
Sbjct: 239 EAT-FCTGIDLLLSG 252

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 48.0 bits (115), Expect = 1e-06
 Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 26/174 (14%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVE 59
           M+ + KRVLLT     I + +A  LA  G RL+LVG N  +L    E +   L       
Sbjct: 1   MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKL----EALAARLPYPGRHR 56

Query: 60  VVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCY--TYEGKM--QDPLQVGEDEFKK 113
            V  D+  E  R     EAV    + +G ++  ++     +   +  QDP  +       
Sbjct: 57  WVVADLTSEAGR-----EAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIER----- 106

Query: 114 LVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 167
           L+ +N  AP  L +A+   ++   +   +V + S  G+  G YPG A+Y  CA+
Sbjct: 107 LLALNLTAPMQLTRALLPLLRAQPS-AMVVNVGSTFGS-IG-YPGYASY--CAS 155

Length = 263

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 48.0 bits (115), Expect = 1e-06
 Identities = 60/263 (22%), Positives = 111/263 (42%), Gaps = 33/263 (12%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQP-VEVVG 62
           + K V++T     I   I+  LA+ G   V+ G     S+  ++    L+  QP  E V 
Sbjct: 6   KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGR----SAPDDEFAEELRALQPRAEFVQ 61

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDP--LQVGEDEFKKLVKINFV 120
           +D+ +D      +AV++     G +D  V+       + D   L+ G + F   ++ N +
Sbjct: 62  VDLTDD--AQCRDAVEQTVAKFGRIDGLVN----NAGVNDGVGLEAGREAFVASLERNLI 115

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
             + +       +K S+  G+IV ++S   A  G   G + Y A   +   L R  A+ +
Sbjct: 116 HYYVMAHYCLPHLKASR--GAIVNISSKT-ALTG-QGGTSGYAAAKGAQLALTREWAVAL 171

Query: 181 GKHKIRVNGI----------ARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLA 230
            K  +RVN +             +   D+       E  +  +    PL   +    ++A
Sbjct: 172 AKDGVRVNAVIPAEVMTPLYENWIATFDD------PEAKLAAITAKIPLGHRMTTAEEIA 225

Query: 231 STVIYLISDGSRYMTGTTIYVDG 253
            T ++L+S+ S + TG  ++VDG
Sbjct: 226 DTAVFLLSERSSHTTGQWLFVDG 248

Length = 258

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 59/246 (23%), Positives = 95/246 (38%), Gaps = 65/246 (26%)

Query: 52  LKGGQPVEVVGLDMEEDREGAFD---------EAVDKAC-QILGNLDAFVHCYTYEGKMQ 101
           L       V+G+D  E                 ++D A   + G +DA  +     G   
Sbjct: 4   LLRFLGARVIGVDRREPGMTLDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG-TA 62

Query: 102 DPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAE--------R 153
               V         ++NF+    L +A+  RM     GG+IV + S+ GAE        +
Sbjct: 63  PVELV--------ARVNFLGLRHLTEALLPRMAP---GGAIVNVASLAGAEWPQRLELHK 111

Query: 154 GL-----YPGAAAYGACA------ASIHQL---------VRTAAMEIGKHKIRVNGIARG 193
            L     +   AA+   A      A+ +QL         +R A    G   IRVN +A G
Sbjct: 112 ALAATASFDEGAAW--LAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPG 169

Query: 194 LHLQDEYPI------AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGT 247
                  PI       +GQER   +  +A  + R     ++ A+ +++L SD +R++ G 
Sbjct: 170 P---VFTPILGDFRSMLGQER---VDSDAKRMGR-PATADEQAAVLVFLCSDAARWINGV 222

Query: 248 TIYVDG 253
            + VDG
Sbjct: 223 NLPVDG 228

Length = 241

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 47.8 bits (113), Expect = 2e-06
 Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 6/153 (3%)

Query: 105 QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA 164
           +  E  F ++V +N  AP+F+++    R++++     I+ ++S   A R   P   AY  
Sbjct: 106 ETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNS---RIINISS--AATRISLPDFIAYSM 160

Query: 165 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLD 224
              +I+ +  T A ++G   I VN I  G    D     +      +     +  +R  +
Sbjct: 161 TKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGE 220

Query: 225 VKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 257
           V+ D+A T  +L S  SR++TG  I V G   +
Sbjct: 221 VE-DIADTAAFLASPDSRWVTGQLIDVSGGSCL 252

Length = 252

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 47.5 bits (113), Expect = 2e-06
 Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 14/250 (5%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           K  L+T     I   IA  L   G R++        +  A K      G    +V   ++
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDGYRVIA--TYFSGNDCA-KDWFEEYGFTEDQVRLKEL 59

Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDP--LQVGEDEFKKLVKINFVAPW 123
           +        EA+ +  +  G +D  V+     G  +D    ++   E+  ++  N  + +
Sbjct: 60  DVTDTEECAEALAEIEEEEGPVDILVN---NAGITRDSVFKRMSHQEWNDVINTNLNSVF 116

Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 183
            + + +   M E +  G I+ ++S+ G  +G + G   Y A  A +    +  A E  ++
Sbjct: 117 NVTQPLFAAMCE-QGYGRIINISSVNG-LKGQF-GQTNYSAAKAGMIGFTKALASEGARY 173

Query: 184 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
            I VN IA G ++       +G E    +V    P+ R L    ++A+ V +L+S+ + +
Sbjct: 174 GITVNCIAPG-YIATPMVEQMGPEVLQSIV-NQIPMKR-LGTPEEIAAAVAFLVSEAAGF 230

Query: 244 MTGTTIYVDG 253
           +TG TI ++G
Sbjct: 231 ITGETISING 240

Length = 245

>gnl|CDD|181187 PRK07984, PRK07984, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 47.6 bits (113), Expect = 2e-06
 Identities = 71/274 (25%), Positives = 112/274 (40%), Gaps = 49/274 (17%)

Query: 6   KRVLLTSDGDEISKNIAFHLAK----RGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVV 61
           KR+L+T    ++S  IA+ +A+     G  L       +L    E+    L       V+
Sbjct: 7   KRILVTGVASKLS--IAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDI---VL 61

Query: 62  GLDMEEDR--EGAFDEAVDKACQILGNLDAFVHCYTY------EGKMQDPLQVGEDEFK- 112
             D+ ED   +  F E       +    D FVH   +      +G   +   V  + FK 
Sbjct: 62  PCDVAEDASIDAMFAELGK----VWPKFDGFVHSIGFAPGDQLDGDYVN--AVTREGFKI 115

Query: 113 --KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 170
              +   +FVA   + KA  R M      GS +   S +GAER + P     G   AS+ 
Sbjct: 116 AHDISSYSFVA---MAKAC-RSMLNP---GSALLTLSYLGAERAI-PNYNVMGLAKASLE 167

Query: 171 QLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE-------AAPLHRWL 223
             VR  A  +G   +RVN I+ G       PI       +K  R+         P+ R +
Sbjct: 168 ANVRYMANAMGPEGVRVNAISAG-------PIRTLAASGIKDFRKMLAHCEAVTPIRRTV 220

Query: 224 DVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 257
            ++ D+ ++  +L SD S  ++G  ++VDG  SI
Sbjct: 221 TIE-DVGNSAAFLCSDLSAGISGEVVHVDGGFSI 253

Length = 262

>gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 47.3 bits (112), Expect = 2e-06
 Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 18/139 (12%)

Query: 126 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 185
           L    R M   +    +    S +GA R + P     G   AS+   +R  A  +GK  I
Sbjct: 127 LAKAARPMMRGRNSAIVAL--SYLGAVRAI-PNYNVMGMAKASLEAGIRFTAACLGKEGI 183

Query: 186 RVNGIARGLHLQDEYPIAV-------GQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 238
           R NGI+ G       PI            + +  V    PL R + ++ ++ +T  +L+S
Sbjct: 184 RCNGISAG-------PIKTLAASGIADFGKLLGHVAAHNPLRRNVTIE-EVGNTAAFLLS 235

Query: 239 DGSRYMTGTTIYVDGAQSI 257
           D S  +TG   YVDG  SI
Sbjct: 236 DLSSGITGEITYVDGGYSI 254

Length = 261

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 35/169 (20%)

Query: 115 VKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG------------------------ 150
           +K+N+     L++A+  R+++   G + V ++SI G                        
Sbjct: 80  LKVNYFGLRALMEALLPRLRKGH-GPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVA 138

Query: 151 -AERGLYPGAAAY-GACAASIHQLVRTAAMEIGKHKIRVNGIARGL----HLQDEYPIAV 204
            AE    PG  AY G+  A      R AA  +    +RVN +A G      LQ       
Sbjct: 139 LAEHAGQPGYLAYAGSKEALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPR 198

Query: 205 GQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 253
           G E     V    P+ R  +  +++A  + +L SD + ++ G  ++VDG
Sbjct: 199 GGESVDAFV---TPMGRRAEP-DEIAPVIAFLASDAASWINGANLFVDG 243

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 47.0 bits (112), Expect = 3e-06
 Identities = 57/228 (25%), Positives = 91/228 (39%), Gaps = 45/228 (19%)

Query: 46  EKMMGSLK--GGQPVEVVGLDMEEDR--EGAFDEAVDKACQILGNLDAFVHCYTY----- 96
           ++M  SL+    +   +V  D+  D   E AF    ++    +G +D  VH   Y     
Sbjct: 43  DRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKER----VGKIDGIVHAIAYAKKEE 98

Query: 97  -EGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE-SKAGGSIVFLTSIIGAERG 154
             G + D  + G    + +   + +A       V +  +     G SIV LT   G+ER 
Sbjct: 99  LGGNVTDTSRDGYALAQDISAYSLIA-------VAKYARPLLNPGASIVTLT-YFGSERA 150

Query: 155 LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA---------RGLHLQDEYPIAVG 205
           + P     G   A++   VR  A ++GK  IRVN I+          G+    +  +   
Sbjct: 151 I-PNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDL-LKES 208

Query: 206 QERAVKLVREAAPLHRWLDVK-NDLASTVIYLISDGSRYMTGTTIYVD 252
             R V  V           V   ++ +T  +L+SD S  +TG  IYVD
Sbjct: 209 DSRTVDGV----------GVTIEEVGNTAAFLLSDLSTGVTGDIIYVD 246

Length = 252

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 46.7 bits (111), Expect = 3e-06
 Identities = 58/244 (23%), Positives = 107/244 (43%), Gaps = 20/244 (8%)

Query: 17  ISKNIAFHLAKRGCRLV--LVGNERRLSSVAEKMMGSLKG-GQPVEVVGLDMEEDREGAF 73
           I   I   LAK G R+      NE R    AE  +      G    VV  D+        
Sbjct: 12  IGTAICQRLAKDGYRVAANCGPNEER----AEAWLQEQGALGFDFRVVEGDVSSFESCK- 66

Query: 74  DEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAVGR 131
             AV K    LG +D  V+     G  +D    ++  +++  ++  N  + + + + V  
Sbjct: 67  -AAVAKVEAELGPIDVLVNN---AGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVID 122

Query: 132 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 191
            M+E +  G I+ ++S+ G ++G + G   Y A  A +    +  A E     + VN I+
Sbjct: 123 GMRE-RGWGRIINISSVNG-QKGQF-GQTNYSAAKAGMIGFTKALAQEGATKGVTVNTIS 179

Query: 192 RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 251
            G ++  +  +A+ ++    +V    P+ R L    ++A+ V +L S+ + Y+TG T+ +
Sbjct: 180 PG-YIATDMVMAMREDVLNSIV-AQIPVGR-LGRPEEIAAAVAFLASEEAGYITGATLSI 236

Query: 252 DGAQ 255
           +G  
Sbjct: 237 NGGL 240

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|180789 PRK06997, PRK06997, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 46.7 bits (111), Expect = 4e-06
 Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 16/123 (13%)

Query: 147 SIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV-- 204
           S +GAER + P     G   AS+   VR  A+ +G   IR NGI+ G       PI    
Sbjct: 145 SYLGAERVV-PNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAG-------PIKTLA 196

Query: 205 -----GQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 259
                   + +  V   APL R + ++ ++ +   +L+SD +  +TG   +VD   +   
Sbjct: 197 ASGIKDFGKILDFVESNAPLRRNVTIE-EVGNVAAFLLSDLASGVTGEITHVDSGFNAVV 255

Query: 260 PRM 262
             M
Sbjct: 256 GGM 258

Length = 260

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 46.4 bits (110), Expect = 4e-06
 Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 6/121 (4%)

Query: 133 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 192
           M  ++ GG I+ L S+ G       G   Y A  A +    +  A+E+ K KI VN IA 
Sbjct: 122 MIRARQGGRIITLASVSGVMGN--RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAP 179

Query: 193 GLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 252
           GL    +  +    E  +    +  P++R +    ++AS   +L+SDG+ Y+T   I V+
Sbjct: 180 GL---IDTEMLAEVEHDLDEALKTVPMNR-MGQPAEVASLAGFLMSDGASYVTRQVISVN 235

Query: 253 G 253
           G
Sbjct: 236 G 236

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 46.5 bits (110), Expect = 4e-06
 Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 17/126 (13%)

Query: 139 GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD 198
           GGSIV LT   GAE+ + P     G   A++   V+  A ++G++ IRVN I+ G     
Sbjct: 139 GGSIVTLT-YYGAEK-VIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAG----- 191

Query: 199 EYPIAVGQERAV-------KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 251
             PI      A+       K     APL R    + D+    +YL S+ S+ +TG   YV
Sbjct: 192 --PIKTLASSAIGDFSTMLKSHAATAPLKRNT-TQEDVGGAAVYLFSELSKGVTGEIHYV 248

Query: 252 DGAQSI 257
           D   +I
Sbjct: 249 DCGYNI 254

Length = 260

>gnl|CDD|178331 PLN02730, PLN02730, enoyl-[acyl-carrier-protein] reductase

 Score = 46.7 bits (111), Expect = 5e-06
 Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 16/134 (11%)

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG----ACAASIHQLVRTAAMEI 180
           LL+  G  M     GG+ + LT I  A   + PG   YG    +  A++    R  A E 
Sbjct: 160 LLQHFGPIMNP---GGASISLTYI--ASERIIPG---YGGGMSSAKAALESDTRVLAFEA 211

Query: 181 G-KHKIRVNGIARGLHLQDEYPIAVG-QERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 238
           G K+KIRVN I+ G  L      A+G  +  ++     APL + L   +++ +   +L S
Sbjct: 212 GRKYKIRVNTISAG-PLGSRAAKAIGFIDDMIEYSYANAPLQKELTA-DEVGNAAAFLAS 269

Query: 239 DGSRYMTGTTIYVD 252
             +  +TG TIYVD
Sbjct: 270 PLASAITGATIYVD 283

Length = 303

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 45.9 bits (109), Expect = 7e-06
 Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 22/257 (8%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKG-GQPVEVVGLD 64
           K  L+T     +    A  LA+ G ++VL    RR+  + E +   ++  G    VV LD
Sbjct: 10  KVALVTGASSGLGARFAQVLAQAGAKVVLAS--RRVERLKE-LRAEIEAEGGAAHVVSLD 66

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVH--CYTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
           + +    +   AV  A    G +D  V+    +   K+ D   V   +F  +   N    
Sbjct: 67  VTD--YQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVD---VTPADFDFVFDTNTRGA 121

Query: 123 WFLLKAVGRRM-------KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRT 175
           +F+ + V +RM         +K GG I+ + S+ G    + P    Y    A++  + R 
Sbjct: 122 FFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR--VLPQIGLYCMSKAAVVHMTRA 179

Query: 176 AAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY 235
            A+E G+H I VN I  G ++  E      +    + +    P  R +    DL   ++ 
Sbjct: 180 MALEWGRHGINVNAICPG-YIDTEINHHHWETEQGQKLVSMLPRKR-VGKPEDLDGLLLL 237

Query: 236 LISDGSRYMTGTTIYVD 252
           L +D S+++ G  I  D
Sbjct: 238 LAADESQFINGAIISAD 254

Length = 258

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 45.3 bits (108), Expect = 9e-06
 Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 22/183 (12%)

Query: 12  SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDRE 70
           +DG  I K  A  LAKRG  ++L+   + +L +VA+++    K G   + +  D      
Sbjct: 10  TDG--IGKAYAEELAKRGFNVILISRTQEKLDAVAKEI--EEKYGVETKTIAADFSAG-- 63

Query: 71  GAFDEAVDKACQILGNLDAFV------HCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
              D+  ++  + L  LD  +        ++        L+  EDE + ++ +N +A   
Sbjct: 64  ---DDIYERIEKELEGLDIGILVNNVGISHSIPEY---FLETPEDELQDIINVNVMATLK 117

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           + + +   M + K G  IV ++S  G      P  A Y A  A +    R    E     
Sbjct: 118 MTRLILPGMVKRKKGA-IVNISSFAGLIP--TPLLATYSASKAFLDFFSRALYEEYKSQG 174

Query: 185 IRV 187
           I V
Sbjct: 175 IDV 177

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 31/169 (18%), Positives = 70/169 (41%), Gaps = 8/169 (4%)

Query: 21  IAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA 80
           +   L  RG   V+     R  S A ++         + ++ LD+ ++   + + AV + 
Sbjct: 14  LVRQLLARGNNTVIATC--RDPSAATELAALGASHSRLHILELDVTDEIAESAE-AVAER 70

Query: 81  CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGG 140
               G LD  ++            +V  ++  ++ ++N + P  L +A    +    A  
Sbjct: 71  LGDAG-LDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQAF-LPLLLKGARA 128

Query: 141 SIVFLTSIIG--AERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRV 187
            I+ ++S +G   +       + Y A  A+++ L ++ A+E+ +  I V
Sbjct: 129 KIINISSRVGSIGDNTSGGWYS-YRASKAALNMLTKSLAVELKRDGITV 176

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 35/160 (21%), Positives = 70/160 (43%), Gaps = 19/160 (11%)

Query: 109 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI---IGAERGLYPGAAAYGAC 165
            +F + +++N V  +   +   + M      G I+ + S    +G++      AA +G  
Sbjct: 102 GDFDRSLQVNLVGYFLCAREFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGV 161

Query: 166 AASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDE--------YPIAVG-QERAVKLV-RE 215
                 L ++ A+++ +H I VN +  G  L+          Y   +G +E  V+    +
Sbjct: 162 G-----LTQSLALDLAEHGITVNSLMLGNLLKSPMFQSLLPQYAKKLGIKESEVEQYYID 216

Query: 216 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 255
             PL R  D + D+ + +++  S  + Y TG +I + G Q
Sbjct: 217 KVPLKRGCDYQ-DVLNMLLFYASPKASYCTGQSINITGGQ 255

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 14/180 (7%)

Query: 17  ISKNIAFHLAKRGCRLVLVG--NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFD 74
           I   I   LAK G   V++   +  R  +  EK+      G  V    LD+ +D   + +
Sbjct: 12  IGFEIVRQLAKSGPGTVILTARDVERGQAAVEKL---RAEGLSVRFHQLDVTDD--ASIE 66

Query: 75  EAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 134
            A D   +  G LD  V+      K  D      ++ ++ +K NF     + +A+   +K
Sbjct: 67  AAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDVTQALLPLLK 126

Query: 135 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL 194
           +S AG  IV ++S +G         +AYG   A+++ L R  A E+ +  I+VN    G 
Sbjct: 127 KSPAG-RIVNVSSGLG------SLTSAYGVSKAALNALTRILAKELKETGIKVNACCPGW 179

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 61/241 (25%), Positives = 99/241 (41%), Gaps = 33/241 (13%)

Query: 33  VLVGNERRLSSVAEKMMGSLKGGQPVEVVG-LDMEEDREGAFDEAVDKACQILGNLDAFV 91
           VL  +  +++ +         G   V V G +    D E     AV +  +  G LD F+
Sbjct: 33  VLDRSAEKVAELRADF-----GDAVVGVEGDVRSLADNE----RAVARCVERFGKLDCFI 83

Query: 92  HC---YTYEGKMQD-PLQVGEDEFKKLVKINFVAPWFL-LKAVGRRMKESKAGGSIVFLT 146
                + Y   + D P +  ++ F +L  IN V  + L  KA    +  ++  GS++F  
Sbjct: 84  GNAGIWDYSTSLVDIPEEKLDEAFDELFHIN-VKGYILGAKAALPALYATE--GSVIFTV 140

Query: 147 SIIGAERGLYP--GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY-PIA 203
           S      G YP  G   Y A   ++  LV+  A E+  H IRVNG+A G  + D   P +
Sbjct: 141 S----NAGFYPGGGGPLYTASKHAVVGLVKQLAYELAPH-IRVNGVAPGGMVTDLRGPAS 195

Query: 204 VGQERAVK-------LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 256
           +GQ            +++   PL    + ++   + V       +R  TGT I  DG   
Sbjct: 196 LGQGETSISTPPLDDMLKSILPLGFAPEPEDYTGAYVFLASRGDNRPATGTVINYDGGMG 255

Query: 257 I 257
           +
Sbjct: 256 V 256

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 14/92 (15%)

Query: 167 ASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK---LVREAAPLHRWL 223
           A++    RT A  +   +IRVN I  G  L           R      L R + P     
Sbjct: 164 AALWTATRTLAQALAP-RIRVNAIGPGPTLPSGRQSPEDFARQHAATPLGRGSTP----- 217

Query: 224 DVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 255
               ++A+ V YL+   +  +TG  I VDG Q
Sbjct: 218 ---EEIAAAVRYLLD--APSVTGQMIAVDGGQ 244

Length = 258

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 43.6 bits (103), Expect = 3e-05
 Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 8/139 (5%)

Query: 117 INFVAPWFLLKAVGRRM-KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRT 175
           +N  A +  ++AV   M K S+  G++V + S+ G     +P   AY A  A +    + 
Sbjct: 107 LNLEAAYLCVEAVLEGMLKRSR--GAVVNIGSVNGMAALGHP---AYSAAKAGLIHYTKL 161

Query: 176 AAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV-KLVREAAPLHRWLDVKNDLASTVI 234
            A+E G+  IR N +A G      +   V     V + +++  PL  +     D+A+ V+
Sbjct: 162 LAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPD-DVANAVL 220

Query: 235 YLISDGSRYMTGTTIYVDG 253
           +L S  +R +TG  + VDG
Sbjct: 221 FLASPAARAITGVCLPVDG 239

Length = 257

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 43.6 bits (103), Expect = 4e-05
 Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 54/264 (20%)

Query: 19  KNIAFHLAK----RGCRLVLV----GNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDRE 70
           K+IA+ +AK    +G  L         ++R+  +A+++ GS        V  LD+ +   
Sbjct: 17  KSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQEL-GSDY------VYELDVSKPEH 69

Query: 71  GAFDEAVDKACQILGNLDAFVHCYTY---EGKMQDPLQVGEDEFKKLVKINFVAPWFLLK 127
             F    +   + LG +D  VH   +   E      L+  ++ F   ++I+  +   L +
Sbjct: 70  --FKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTR 127

Query: 128 AVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY-------GACAASIHQLVRTAAMEI 180
           A+   + +   G S++ L+         Y G   Y       G   A++   VR  A+++
Sbjct: 128 ALLPLLND---GASVLTLS---------YLGGVKYVPHYNVMGVAKAALESSVRYLAVDL 175

Query: 181 GKHKIRVNGIARGLHLQDEYPI------AVGQERAVKLVREA-APLHRWLDVKNDLASTV 233
           GK  IRVN I+ G       PI       +G  R +    E  APL + + ++ ++ ++ 
Sbjct: 176 GKKGIRVNAISAG-------PIKTLAASGIGDFRMILKWNEINAPLKKNVSIE-EVGNSG 227

Query: 234 IYLISDGSRYMTGTTIYVDGAQSI 257
           +YL+SD S  +TG   YVD   +I
Sbjct: 228 MYLLSDLSSGVTGEIHYVDAGYNI 251

Length = 274

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 43.6 bits (103), Expect = 4e-05
 Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 12/158 (7%)

Query: 104 LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG 163
           L  G D ++++  +N  + +   KA    M      GSI+   S + A  G      +Y 
Sbjct: 98  LNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFV-AVMGSATSQISYT 155

Query: 164 ACAASIHQLVRTAAMEIGKHKIRVNGIARGL----HLQDEYPIAVGQERAVK-LVREAAP 218
           A    +  + R   ++  +  IRVN +  G      LQ+ +  A   ERA + LV    P
Sbjct: 156 ASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELF--AKDPERAARRLVH--VP 211

Query: 219 LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 256
           + R+ +   ++A+ V +L SD + ++T +T  VDG  S
Sbjct: 212 MGRFAE-PEEIAAAVAFLASDDASFITASTFLVDGGIS 248

Length = 255

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 43.8 bits (104), Expect = 4e-05
 Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 16/126 (12%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK---GGQPVEV 60
           K V++T  + G  I K  A  LAKRG  +++           E+    +K   G   VEV
Sbjct: 2   KVVVITGANSG--IGKETARELAKRGAHVIIACRNE---EKGEEAAAEIKKETGNAKVEV 56

Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFV 120
           + LD+         +  ++       LD  ++     G M  P ++ +D F+    +N++
Sbjct: 57  IQLDLSSLAS--VRQFAEEFLARFPRLDILINN---AGIMAPPRRLTKDGFELQFAVNYL 111

Query: 121 APWFLL 126
              FLL
Sbjct: 112 GH-FLL 116

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 43.5 bits (102), Expect = 4e-05
 Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 8/148 (5%)

Query: 108 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL-YPGAAAYGACA 166
           E+ F +++ +N  AP+FL++   + +   +A G ++ ++S   AE  L + G+ AYG   
Sbjct: 111 EEIFDEIMAVNIKAPFFLIQ---QTLPLLRAEGRVINISS---AEVRLGFTGSIAYGLSK 164

Query: 167 ASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVK 226
            +++ +    A  +G+  I VN I  G    D     +           ++   R   V+
Sbjct: 165 GALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVE 224

Query: 227 NDLASTVIYLISDGSRYMTGTTIYVDGA 254
            D+A  V +L S  SR++TG  I V G 
Sbjct: 225 -DIADAVAFLASSDSRWVTGQIIDVSGG 251

Length = 254

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 45/204 (22%), Positives = 73/204 (35%), Gaps = 32/204 (15%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLD- 64
           K  ++T     I    A  L K+G ++ ++   R  +  A   + ++        V  D 
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILD--RNENPGAAAELQAINPKVKATFVQCDV 58

Query: 65  -MEEDREGAFDEAVDKACQILGNLDAFV--------HCYTYEGKMQDPLQVGEDEFKKLV 115
              E    AF +A++K     G +D  +          Y + GK+  P        +K +
Sbjct: 59  TSWEQLAAAFKKAIEK----FGRVDILINNAGILDEKSYLFAGKLPPPW-------EKTI 107

Query: 116 KINFVAPWFLLKAVGRRMKESKAG--GSIVFLTSIIGAERGLYP--GAAAYGACAASIHQ 171
            +N              M ++K G  G IV + S+     GLYP      Y A    +  
Sbjct: 108 DVNLTGVINTTYLALHYMDKNKGGKGGVIVNIGSVA----GLYPAPQFPVYSASKHGVVG 163

Query: 172 LVRTAAME-IGKHKIRVNGIARGL 194
             R+ A     K  +RVN I  G 
Sbjct: 164 FTRSLADLLEYKTGVRVNAICPGF 187

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 43.0 bits (102), Expect = 5e-05
 Identities = 57/239 (23%), Positives = 104/239 (43%), Gaps = 21/239 (8%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           K VL+T     I +  A   AK G +L+L G  RR   + +++   L    PV+V+ L +
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTG--RRAERL-QELADELGAKFPVKVLPLQL 57

Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ--DPLQ-VGEDEFKKLVKINFVAP 122
           +     + + A++   +   ++D  V+     G     DP Q    ++++ ++  N    
Sbjct: 58  DVSDRESIEAALENLPEEFRDIDILVN---NAGLALGLDPAQEADLEDWETMIDTNVKGL 114

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
             + + +   M   +  G I+ L SI G  R  Y G   Y A  A++ Q       ++  
Sbjct: 115 LNVTRLILPIMIA-RNQGHIINLGSIAG--RYPYAGGNVYCATKAAVRQFSLNLRKDLIG 171

Query: 183 HKIRVNGIARGLHLQDEYPI---AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 238
             IRV  I  GL ++ E+ +      +E+A K+     PL        D+A T++++ S
Sbjct: 172 TGIRVTNIEPGL-VETEFSLVRFHGDKEKADKVYEGVEPL-----TPEDIAETILWVAS 224

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 42.9 bits (101), Expect = 7e-05
 Identities = 49/228 (21%), Positives = 85/228 (37%), Gaps = 34/228 (14%)

Query: 58  VEVVGLDMEEDREGAFD-------------EAVDKACQILGNLDAFVHCYTYE--GKMQD 102
             V+  D++E      D             + +D      G +D  V+    E  G +  
Sbjct: 31  SNVINFDIKEPSYNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHA 90

Query: 103 PLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI--IGAERGLYPGAA 160
              V EDE+ +++ +N    + + K     M +    G I+ + S+      R     AA
Sbjct: 91  ---VEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINIASVQSFAVTRN----AA 142

Query: 161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARG------LHLQDEYPIAVGQERAVKLVR 214
           AY     ++  L R+ A++     IR   +  G      L    E  +    E   + +R
Sbjct: 143 AYVTSKHAVLGLTRSIAVDYAP-TIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIR 201

Query: 215 EAAPLHRWLDV--KNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP 260
           E   +H    V    ++A  V +L SD + ++TG  + VDG      P
Sbjct: 202 EWGEMHPMKRVGKPEEVAYVVAFLASDLASFITGECVTVDGGLRALIP 249

Length = 258

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 13/193 (6%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLV---LVGNERRLSSVAEKMMGSLKGGQPVEV 60
           Q ++ L+T     I +  A   A+ G  +    L   E+  + V + +    +G + V +
Sbjct: 54  QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQA--EGRKAVAL 111

Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFV 120
            G D+++  E    + V++A + LG LD  V+    +  ++D   +  ++F    K N  
Sbjct: 112 PG-DLKD--EAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVY 168

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
           A ++L KA    +     G SI+   SI   +    P    Y +  A+I    +  A ++
Sbjct: 169 AMFWLCKAAIPHL---PPGASIINTGSIQSYQPS--PTLLDYASTKAAIVAFTKALAKQV 223

Query: 181 GKHKIRVNGIARG 193
            +  IRVN +A G
Sbjct: 224 AEKGIRVNAVAPG 236

Length = 300

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 21/186 (11%)

Query: 22  AFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA 80
           A   A+RG ++VL   +   L  +A ++     GG+ + VV    +       + A D A
Sbjct: 17  ALAFAERGAKVVLAARSAEALHELAREVRE--LGGEAIAVVADVADAA---QVERAADTA 71

Query: 81  CQILGNLDAFVH--CYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA 138
            +  G +D +V+       G+ +D   V  +EF+++  +N++   +   A    ++  + 
Sbjct: 72  VERFGRIDTWVNNAGVAVFGRFED---VTPEEFRRVFDVNYLGHVYGTLAALPHLR--RR 126

Query: 139 GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD 198
           GG  +     +   R   P  AAY A   ++     +   E+      +        +  
Sbjct: 127 GGGALINVGSLLGYRSA-PLQAAYSASKHAVRGFTESLRAELAHDGAPI-------SVTL 178

Query: 199 EYPIAV 204
             P A+
Sbjct: 179 VQPTAM 184

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 11/176 (6%)

Query: 14  GDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGA 72
           GD +   IA   A  G  + L    E +L ++   ++    GG    V     +ED   A
Sbjct: 8   GDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDA-GGSAKAVPTDARDEDEVIA 66

Query: 73  FDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQ-VGEDEFKKLVKINFVAPWFLLKAVGR 131
             + +++    +G L+  V  Y     +  P+       F+K+ ++     +   +   +
Sbjct: 67  LFDLIEEE---IGPLEVLV--YNAGANVWFPILETTPRVFEKVWEMAAFGGFLAAREAAK 121

Query: 132 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRV 187
           RM      G+I+F T    + RG   G AA+     ++  L ++ A E+G   I V
Sbjct: 122 RMLARG-RGTIIF-TGATASLRG-RAGFAAFAGAKFALRALAQSMARELGPKGIHV 174

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 41.8 bits (98), Expect = 2e-04
 Identities = 61/256 (23%), Positives = 101/256 (39%), Gaps = 17/256 (6%)

Query: 3   NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNER-RLSSVAEKMMGSLKGGQPVEVV 61
           +  +  L+T     I   IA  L   G ++VL   +R R S VA+ +      G+    +
Sbjct: 8   HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL------GENAWFI 61

Query: 62  GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGE-DEFKKLVKINFV 120
            +D+ +  E      V +     G LDA V            L+      + +++ +N  
Sbjct: 62  AMDVAD--EAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLT 119

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
            P  L K     ++     G+IV L S     R   P   AY A    +  L    A+ +
Sbjct: 120 GPMLLAKHCAPYLRAH--NGAIVNLAST--RARQSEPDTEAYAASKGGLLALTHALAISL 175

Query: 181 GKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG 240
           G  +IRVN ++ G  +    P     E   +      P  R   V+ D+A+ V +L+S  
Sbjct: 176 GP-EIRVNAVSPGW-IDARDPSQRRAEPLSEADHAQHPAGRVGTVE-DVAAMVAWLLSRQ 232

Query: 241 SRYMTGTTIYVDGAQS 256
           + ++TG    VDG  +
Sbjct: 233 AGFVTGQEFVVDGGMT 248

Length = 255

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 26/198 (13%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVL--VGNER----RLSSVAEKMMGSLK--GGQP 57
           + VL+T  G  + +  A   A+RG ++V+  +G +R    + SS A+K++  +K  GG+ 
Sbjct: 6   RVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAGGKA 65

Query: 58  VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDP--LQVGEDEFKKLV 115
           V     D  ED E     A+D      G +D  V+     G ++D    ++ E+++  ++
Sbjct: 66  V--ANYDSVEDGEKIVKTAIDA----FGRVDILVN---NAGILRDRSFAKMSEEDWDLVM 116

Query: 116 KINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP--GAAAYGACAASIHQLV 173
           +++    + + +A    M++ K  G I+  +S   A  GLY   G A Y A    +  L 
Sbjct: 117 RVHLKGSFKVTRAAWPYMRKQK-FGRIINTSS--AA--GLYGNFGQANYSAAKLGLLGLS 171

Query: 174 RTAAMEIGKHKIRVNGIA 191
            T A+E  K+ I  N IA
Sbjct: 172 NTLAIEGAKYNITCNTIA 189

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 50/196 (25%), Positives = 80/196 (40%), Gaps = 31/196 (15%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K V++T     I   +A  L  RG +L LV   E  L+++A      L G   V  V  D
Sbjct: 10  KVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAA----ELGGDDRVLTVVAD 65

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVH---CYTYEGKMQ-DPLQVGEDEFKKLVKINFV 120
           +  D   A   A ++A +  G +D  V      +     Q DP     D F++++ +N +
Sbjct: 66  V-TDLA-AMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDP-----DAFRRVIDVNLL 118

Query: 121 APW-----FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRT 175
             +      L   + RR       G ++ ++S+  A     PG AAY A  A +      
Sbjct: 119 GVFHTVRATLPALIERR-------GYVLQVSSL--AAFAAAPGMAAYCASKAGVEAFANA 169

Query: 176 AAMEIGKHKIRVNGIA 191
             +E+  H + V G A
Sbjct: 170 LRLEVAHHGVTV-GSA 184

Length = 296

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 41.4 bits (97), Expect = 2e-04
 Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 7/128 (5%)

Query: 131 RRM--KESKAGGSIVFLTSIIGAERGLYPGA-AAYGACAASIHQLVRTAAMEIGKHKIRV 187
           +RM  K   +GG+IV ++S   A R   PG    Y A   +I  L    ++E+    IRV
Sbjct: 124 KRMALKHGGSGGAIVNVSS--AASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQGIRV 181

Query: 188 NGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGT 247
           N +  G  +  E   + G+   V  V+   P+ R      ++A  +++L+SD + Y+TG+
Sbjct: 182 NCVRPGF-IYTEMHASGGEPGRVDRVKSNIPMQRG-GQPEEVAQAIVWLLSDKASYVTGS 239

Query: 248 TIYVDGAQ 255
            I + G +
Sbjct: 240 FIDLAGGK 247

Length = 247

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 40.0 bits (94), Expect = 6e-04
 Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 5/89 (5%)

Query: 101 QDPLQVGEDEFKKLVKINFVAPWFLLKA-VGRRMKESKAGGSIVFLTSIIGA-ERGLYPG 158
           Q        E  +L   N +AP  L +  +G+        G + F++S +G+ E      
Sbjct: 87  QSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQ---GVLAFMSSQLGSVELPDGGE 143

Query: 159 AAAYGACAASIHQLVRTAAMEIGKHKIRV 187
              Y A  A+++ + R+   E+G+  + V
Sbjct: 144 MPLYKASKAALNSMTRSFVAELGEPTLTV 172

Length = 225

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 40.0 bits (94), Expect = 6e-04
 Identities = 72/287 (25%), Positives = 102/287 (35%), Gaps = 68/287 (23%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           KRVL+T     I    A   A  GC L LV  +   L ++A  +  +   G  V V  LD
Sbjct: 8   KRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAA--HGVDVAVHALD 65

Query: 65  M--EEDRE------GAFDEAVDKACQI-LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLV 115
           +   E RE      G  D  V+ A  I  G LD           + D       E K   
Sbjct: 66  LSSPEAREQLAAEAGDIDILVNNAGAIPGGGLD----------DVDDAAWRAGWELKVFG 115

Query: 116 KINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGA-----ERGLYPGAAAYGACAASIH 170
            I+      L +    RMK ++  G IV   ++IGA     +     G+A   A  A   
Sbjct: 116 YID------LTRLAYPRMK-ARGSGVIV---NVIGAAGENPDADYICGSAGNAALMAFTR 165

Query: 171 QLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR---------------- 214
            L   +        +RV G+          P  V  +R + L++                
Sbjct: 166 ALGGKSL----DDGVRVVGVN---------PGPVATDRMLTLLKGRARAELGDESRWQEL 212

Query: 215 -EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP 260
               PL R    + ++A  V +L S  S Y +GT + VDG  S    
Sbjct: 213 LAGLPLGRPATPE-EVADLVAFLASPRSGYTSGTVVTVDGGISARGS 258

Length = 259

>gnl|CDD|235776 PRK06300, PRK06300, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 39.8 bits (93), Expect = 8e-04
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 13/122 (10%)

Query: 137 KAGGSIVFLTSIIGAERGLYPGAAAYG----ACAASIHQLVRTAAMEIG-KHKIRVNGIA 191
             GGS + LT  + + R + PG   YG    +  A++    +  A E G +  IRVN I+
Sbjct: 168 NPGGSTISLT-YLASMRAV-PG---YGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTIS 222

Query: 192 RGLHLQDEYPIAVG-QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIY 250
            G  L      A+G  ER V   ++ APL   ++ +  + +   +L+S  +  +TG T+Y
Sbjct: 223 AG-PLASRAGKAIGFIERMVDYYQDWAPLPEPMEAE-QVGAAAAFLVSPLASAITGETLY 280

Query: 251 VD 252
           VD
Sbjct: 281 VD 282

Length = 299

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 49/191 (25%), Positives = 79/191 (41%), Gaps = 26/191 (13%)

Query: 77  VDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 136
           V +A + LG LD        +  + D   +  ++F+K   IN  A ++L +     +   
Sbjct: 119 VHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEA---IPLL 175

Query: 137 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG--- 193
             G SI+  +SI   +    P    Y A  A+I    R  A ++ +  IRVN +A G   
Sbjct: 176 PKGASIITTSSIQAYQPS--PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIW 233

Query: 194 --LHL-----QDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
             L +     QD+ P   GQ+  +K   + A          +LA   +YL S  S Y+T 
Sbjct: 234 TALQISGGQTQDKIP-QFGQQTPMKRAGQPA----------ELAPVYVYLASQESSYVTA 282

Query: 247 TTIYVDGAQSI 257
               V G + +
Sbjct: 283 EVHGVCGGEHL 293

Length = 294

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 38.8 bits (91), Expect = 0.001
 Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 25/165 (15%)

Query: 6   KRVLL---TSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVV 61
           K++L+   TSD   I++  A   A  G RL L   +  RL  +A+ +    +G   V   
Sbjct: 2   KKILIIGATSD---IARACARRYAAAGARLYLAARDVERLERLADDL--RARGAVAVSTH 56

Query: 62  GLDMEE-DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFV 120
            LD+ +     AF +++          D  +      G  Q   +       +  + NF 
Sbjct: 57  ELDILDTASHAAFLDSLPAL------PDIVLIAVGTLGD-QAACEADPALALREFRTNFE 109

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-----LYPGAA 160
            P  LL  +  R  E++  G+IV ++S+ G +RG     +Y G+A
Sbjct: 110 GPIALLTLLANRF-EARGSGTIVGISSVAG-DRGRASNYVY-GSA 151

Length = 243

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 38.7 bits (91), Expect = 0.002
 Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 16/150 (10%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK 79
            A   A+RG ++VL+   E  L ++A ++     GG+ + VV  D+ +    A   A D+
Sbjct: 24  TARAFARRGAKVVLLARGEEGLEALAAEIRA--AGGEALAVVA-DVAD--AEAVQAAADR 78

Query: 80  ACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 137
           A + LG +D +V+    T  G  +D   V  +EF+++ ++ ++       A  R M+  +
Sbjct: 79  AEEELGPIDTWVNNAMVTVFGPFED---VTPEEFRRVTEVTYLGVVHGTLAALRHMRP-R 134

Query: 138 AGGSIVFLTSIIGAERGLYPGAAAYGACAA 167
             G+I+ + S + A R + P  +AY  CAA
Sbjct: 135 DRGAIIQVGSAL-AYRSI-PLQSAY--CAA 160

Length = 334

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 51/188 (27%), Positives = 80/188 (42%), Gaps = 12/188 (6%)

Query: 8   VLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM-E 66
           VL+T     I + +A   AK G  + L    RR   + E     L     VEV  LD+ +
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAA--RRTDRLDELKAELLNPNPSVEVEILDVTD 58

Query: 67  EDREGAFDEAVDKACQILGNLDAFVHCY-TYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 125
           E+R       ++     LG LD  +      +G     L      F++ +  N +    +
Sbjct: 59  EERNQLVIAELEAE---LGGLDLVIINAGVGKGTSLGDLSF--KAFRETIDTNLLGAAAI 113

Query: 126 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 185
           L+A   + +    G  +V ++S+    RGL PGAAAY A  A++  L  +   ++ K  I
Sbjct: 114 LEAALPQFRAKGRGH-LVLISSVAAL-RGL-PGAAAYSASKAALSSLAESLRYDVKKRGI 170

Query: 186 RVNGIARG 193
           RV  I  G
Sbjct: 171 RVTVINPG 178

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 16/124 (12%)

Query: 77  VDKACQILGNLDAFVHCYTYEGKMQDPLQVG--EDEFKKLVKINFVAPWFLLKAVGRRMK 134
           VD A +  G LD  V+     G ++D +     E+E+  ++ ++    +  L+      +
Sbjct: 83  VDAAVETFGGLDVLVN---NAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWR 139

Query: 135 -ESKAG----GSIVFLTSIIGAERGLYP--GAAAYGACAASIHQLVRTAAMEIGKHKIRV 187
            ESKAG      I+  +S  GA  GL    G   Y A  A I  L   AA E+G++ + V
Sbjct: 140 AESKAGRAVDARIINTSS--GA--GLQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTV 195

Query: 188 NGIA 191
           N IA
Sbjct: 196 NAIA 199

Length = 286

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)

Query: 105 QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA 164
           +   +E    V +N +AP  L     +  K+ K    ++ ++S  GA +  Y G +AY +
Sbjct: 99  KAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISS--GAAKNPYFGWSAYCS 156

Query: 165 CAASIHQLVRTAAME 179
             A +    +T A E
Sbjct: 157 SKAGLDMFTQTVATE 171

Length = 251

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 17/186 (9%)

Query: 8   VLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDME 66
           VL+T  G  I + +A   AKRG ++V++  NE+     A  +    K G  V     D+ 
Sbjct: 2   VLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNV---RKAGGKVHYYKCDVS 58

Query: 67  EDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQD--PLQVGEDEFKKLVKINFVAPWF 124
             RE    EA  K  + +G++   ++     G +     L++ ++E +K  ++N +A ++
Sbjct: 59  -KRE-EVYEAAKKIKKEVGDVTILINN---AGVVSGKKLLELPDEEIEKTFEVNTLAHFW 113

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGAC-AASI--HQLVRTAAMEIG 181
             KA    M E    G IV + S+ G       G A Y A  AA++  H+ +R      G
Sbjct: 114 TTKAFLPDMLERNH-GHIVTIASVAG-LISP-AGLADYCASKAAAVGFHESLRLELKAYG 170

Query: 182 KHKIRV 187
           K  I+ 
Sbjct: 171 KPGIKT 176

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 37.5 bits (87), Expect = 0.004
 Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 15/190 (7%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K  L+T     I +  A  L   G R+ +   +E RL++ A + +          V+GL 
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEG--------VLGLA 52

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV-GEDEFKKLVKINFVAPW 123
            +   E     AVD   +  G LDA V+     G M+   ++  E+    L      A +
Sbjct: 53  GDVRDEADVRRAVDAMEEAFGGLDALVN-NAGVGVMKPVEELTPEEWRLVLDTNLTGAFY 111

Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 183
            + KA    ++  + GG+IV + S+ G  +  + G AAY A    +  L   A +++ + 
Sbjct: 112 CIHKAAPALLR--RGGGTIVNVGSLAG--KNAFKGGAAYNASKFGLLGLSEAAMLDLREA 167

Query: 184 KIRVNGIARG 193
            IRV  +  G
Sbjct: 168 NIRVVNVMPG 177

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	266
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
PRK07201	657	short chain dehydrogenase; Provisional	99.98
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.98
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.97
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.97
PRK06101	240	short chain dehydrogenase; Provisional	99.97
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
PRK08264	238	short chain dehydrogenase; Validated	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.97
PRK08017	256	oxidoreductase; Provisional	99.97
PRK09291	257	short chain dehydrogenase; Provisional	99.97
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.96
PRK12367	245	short chain dehydrogenase; Provisional	99.96
PRK06953	222	short chain dehydrogenase; Provisional	99.96
PRK08219	227	short chain dehydrogenase; Provisional	99.96
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.94
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.93
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.91
PLN03209	576	translocon at the inner envelope of chloroplast su	99.89
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.89
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.89
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.88
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.88
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.86
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.86
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.86
PRK06720	169	hypothetical protein; Provisional	99.85
PLN02653	340	GDP-mannose 4,6-dehydratase	99.83
PLN02650	351	dihydroflavonol-4-reductase	99.82
PLN02583	297	cinnamoyl-CoA reductase	99.82
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.81
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.81
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.8
PLN02572	442	UDP-sulfoquinovose synthase	99.79
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.79
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.79
PLN02240	352	UDP-glucose 4-epimerase	99.79
PLN00198	338	anthocyanidin reductase; Provisional	99.78
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.78
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.76
PLN02214	342	cinnamoyl-CoA reductase	99.76
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.75
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.75
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.73
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.72
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.72
PLN02686	367	cinnamoyl-CoA reductase	99.71
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.71
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.71
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.7
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.69
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.68
PLN02427	386	UDP-apiose/xylose synthase	99.66
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.66
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.64
PLN02260	668	probable rhamnose biosynthetic enzyme	99.64
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.64
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.63
PLN02206	442	UDP-glucuronate decarboxylase	99.6
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.6
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.6
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.59
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.58
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.57
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.56
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.55
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.54
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.53
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.51
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.5
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.49
CHL00194	317	ycf39 Ycf39; Provisional	99.49
PRK07201	657	short chain dehydrogenase; Provisional	99.44
PLN02996	491	fatty acyl-CoA reductase	99.44
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.39
PRK05865	854	hypothetical protein; Provisional	99.37
PLN02778	298	3,5-epimerase/4-reductase	99.35
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.35
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.31
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.26
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.25
PRK08309	177	short chain dehydrogenase; Provisional	99.24
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.23
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.22
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.18
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.16
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.15
PLN02260	668	probable rhamnose biosynthetic enzyme	99.14
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.14
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.12
PLN02503	605	fatty acyl-CoA reductase 2	99.1
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.08
PLN00016	378	RNA-binding protein; Provisional	99.07
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.99
PRK12320	699	hypothetical protein; Provisional	98.97
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.92
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.81
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.74
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.62
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.58
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.58
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.57
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.53
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.49
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.42
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.37
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.22
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.22
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.14
PRK09620	229	hypothetical protein; Provisional	98.13
PLN00106	323	malate dehydrogenase	98.09
KOG2774	366	consensus NAD dependent epimerase [General functio	98.0
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.97
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	97.95
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	97.94
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.92
COG2910	211	Putative NADH-flavin reductase [General function p	97.86
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.77
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.74
PTZ00325	321	malate dehydrogenase; Provisional	97.71
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.7
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.69
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.68
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.67
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.62
PRK14982	340	acyl-ACP reductase; Provisional	97.59
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.49
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.45
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.44
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.43
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.41
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.35
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.34
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.33
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.33
PRK06849	389	hypothetical protein; Provisional	97.33
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.29
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.22
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.18
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.11
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.04
PRK05086	312	malate dehydrogenase; Provisional	97.0
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.98
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.97
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.9
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.88
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.88
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.88
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.87
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.86
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.84
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.83
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.78
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.76
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.75
PLN02602	350	lactate dehydrogenase	96.73
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.72
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.7
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.68
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.65
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.64
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.62
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.61
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.59
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.58
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.58
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.56
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.51
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.51
PRK04148	134	hypothetical protein; Provisional	96.5
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.48
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.47
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.45
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.45
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.43
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.43
PRK14968	188	putative methyltransferase; Provisional	96.43
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.43
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.42
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.39
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.38
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.37
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.35
PTZ00117	319	malate dehydrogenase; Provisional	96.34
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.34
COG3268	382	Uncharacterized conserved protein [Function unknow	96.31
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.3
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.28
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.26
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.26
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.25
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	96.23
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.23
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.23
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.22
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.18
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.16
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.13
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.13
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.12
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.12
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.12
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.11
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.07
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.07
PRK08223	287	hypothetical protein; Validated	96.07
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.04
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	95.99
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.99
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	95.98
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.96
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.95
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.92
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.91
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.87
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.86
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.81
PRK06487	317	glycerate dehydrogenase; Provisional	95.81
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.81
PRK13243	333	glyoxylate reductase; Reviewed	95.78
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	95.77
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	95.76
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.73
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.69
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.68
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.65
PRK06932	314	glycerate dehydrogenase; Provisional	95.65
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.63
PLN02928	347	oxidoreductase family protein	95.63
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	95.57
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	95.57
PRK12480	330	D-lactate dehydrogenase; Provisional	95.56
PLN02306	386	hydroxypyruvate reductase	95.55
PRK06223	307	malate dehydrogenase; Reviewed	95.55
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.54
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	95.51
PLN03139	386	formate dehydrogenase; Provisional	95.51
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.49
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.46
PRK05442	326	malate dehydrogenase; Provisional	95.46
PRK09496	453	trkA potassium transporter peripheral membrane com	95.44
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	95.41
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	95.4
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.36
PRK07574	385	formate dehydrogenase; Provisional	95.35
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.35
PRK11790	409	D-3-phosphoglycerate dehydrogenase; Provisional	95.34
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.33
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	95.31
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.3
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	95.29
PRK02006	498	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.28
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.27
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.23
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.23
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.21
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.18
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.16
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.16
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.15
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	95.15
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.11
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.1
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	95.07
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.07
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.06
PLN00203	519	glutamyl-tRNA reductase	95.05
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.04
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.02
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.0
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.0
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.99
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.99
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	94.98
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	94.97
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	94.94
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	94.9
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	94.9
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.85
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	94.84
PRK06436	303	glycerate dehydrogenase; Provisional	94.83
KOG0069	336	consensus Glyoxylate/hydroxypyruvate reductase (D-	94.83
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.82
PRK07411	390	hypothetical protein; Validated	94.76
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.75
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	94.73
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	94.72
PRK09496	453	trkA potassium transporter peripheral membrane com	94.71
PLN02740	381	Alcohol dehydrogenase-like	94.7
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	94.7
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	94.68
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	94.67
PLN02586	360	probable cinnamyl alcohol dehydrogenase	94.66
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	94.65
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	94.65
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	94.6
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	94.6
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	94.58
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	94.56
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	94.52
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	94.48
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	94.39
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	94.39

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=1.7e-49  Score=300.91  Aligned_cols=243  Identities=23%  Similarity=0.360  Sum_probs=218.4

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++.|.++||||++|||+++++.|+++|++|++++ +....++++..+...    .+-..+.||+++..  +++.++++..
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~----~~h~aF~~DVS~a~--~v~~~l~e~~   85 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY----GDHSAFSCDVSKAH--DVQNTLEEME   85 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC----CccceeeeccCcHH--HHHHHHHHHH
Confidence            4689999999999999999999999999999999 777777777666432    46678899999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhcc-CCCCeEEEEecccccccCCCCCch
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES-KAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      +++|++++++||||+ ....-+..+..++|+..+.+|+.+.|..+|++...|... ..+.+||++||+.+..+  ..+..
T Consensus        86 k~~g~psvlVncAGI-trD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiG--N~GQt  162 (256)
T KOG1200|consen   86 KSLGTPSVLVNCAGI-TRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIG--NFGQT  162 (256)
T ss_pred             HhcCCCcEEEEcCcc-ccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccc--cccch
Confidence            999999999999999 465667788999999999999999999999999985433 22569999999999888  47889


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|+++.+|+|++++|++.+|||||+|+||+|.|||...+  +++...++...+|++|.+.++ |+|+.++||+|+.
T Consensus       163 nYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~m--p~~v~~ki~~~iPmgr~G~~E-evA~~V~fLAS~~  239 (256)
T KOG1200|consen  163 NYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAM--PPKVLDKILGMIPMGRLGEAE-EVANLVLFLASDA  239 (256)
T ss_pred             hhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhc--CHHHHHHHHccCCccccCCHH-HHHHHHHHHhccc
Confidence            9999999999999999999999999999999999999999876  466778888999999999998 9999999999999


Q ss_pred             CCcccccEEEEcCCccc
Q 024517          241 SRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~  257 (266)
                      ++|+||+.+.+|||..+
T Consensus       240 ssYiTG~t~evtGGl~m  256 (256)
T KOG1200|consen  240 SSYITGTTLEVTGGLAM  256 (256)
T ss_pred             cccccceeEEEeccccC
Confidence            99999999999999753

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.2e-48  Score=319.45  Aligned_cols=243  Identities=21%  Similarity=0.270  Sum_probs=209.7

Q ss_pred             CCCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDG--DEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      .+++|++|||||+  +|||+++|++|+++|++|+++++.++.++..+++.     ..++.++.+|+++++  ++++++++
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~--~v~~~~~~   76 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLV-----DEEDLLVECDVASDE--SIERAFAT   76 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhc-----cCceeEEeCCCCCHH--HHHHHHHH
Confidence            4689999999999  89999999999999999999985444444444432     136789999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCC---CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC
Q 024517           80 ACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY  156 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  156 (266)
                      +.+.++++|++|||||...+   ..++.+.+.++|+..+++|+.+++.+++.++|+|.+   +|+||++||..+..+  .
T Consensus        77 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~---~g~Iv~iss~~~~~~--~  151 (252)
T PRK06079         77 IKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP---GASIVTLTYFGSERA--I  151 (252)
T ss_pred             HHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc---CceEEEEeccCcccc--C
Confidence            99999999999999997432   256778899999999999999999999999999964   589999999988665  5


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      +++..|+++|+|+++|+++++.|++++|||||+|+||+|+|++.......++..+......|.+|+++|+ |+|+.+.||
T Consensus       152 ~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dva~~~~~l  230 (252)
T PRK06079        152 PNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIE-EVGNTAAFL  230 (252)
T ss_pred             CcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHH-HHHHHHHHH
Confidence            7889999999999999999999999999999999999999998654332334444556678899999998 999999999


Q ss_pred             ccCCCCcccccEEEEcCCccc
Q 024517          237 ISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +++..++++|+++.+|||.++
T Consensus       231 ~s~~~~~itG~~i~vdgg~~~  251 (252)
T PRK06079        231 LSDLSTGVTGDIIYVDKGVHL  251 (252)
T ss_pred             hCcccccccccEEEeCCceec
Confidence            999999999999999999754

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9e-48  Score=322.86  Aligned_cols=246  Identities=24%  Similarity=0.302  Sum_probs=207.6

Q ss_pred             CCCCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDG--DEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |.+++|++|||||+  +|||+++|++|+++|++|+++++.++.++..+++.+..+  .. .++.+|++|.+  +++++++
T Consensus         1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~--~~-~~~~~Dv~d~~--~v~~~~~   75 (274)
T PRK08415          1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELG--SD-YVYELDVSKPE--HFKSLAE   75 (274)
T ss_pred             CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC--Cc-eEEEecCCCHH--HHHHHHH
Confidence            88999999999997  899999999999999999998854444444444443332  23 67899999999  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCC---CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC
Q 024517           79 KACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL  155 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~  155 (266)
                      ++.+.+|++|++|||||+...   ..++.+.+.++|++++++|+.+++.+++.++|+|.+   +|+||++||..+..+  
T Consensus        76 ~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~---~g~Iv~isS~~~~~~--  150 (274)
T PRK08415         76 SLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND---GASVLTLSYLGGVKY--  150 (274)
T ss_pred             HHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc---CCcEEEEecCCCccC--
Confidence            999999999999999997432   256778899999999999999999999999999965   489999999887665  


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      .+.+..|+++|+|+.+|+++++.|++++|||||+|+||+|+|++..................|++|+++|+ |+++.++|
T Consensus       151 ~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pe-dva~~v~f  229 (274)
T PRK08415        151 VPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIE-EVGNSGMY  229 (274)
T ss_pred             CCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHH-HHHHHHHH
Confidence            57888999999999999999999999999999999999999987543211111122233467889999998 99999999


Q ss_pred             HccCCCCcccccEEEEcCCccc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      |+++..+++||+++.+|||..+
T Consensus       230 L~s~~~~~itG~~i~vdGG~~~  251 (274)
T PRK08415        230 LLSDLSSGVTGEIHYVDAGYNI  251 (274)
T ss_pred             HhhhhhhcccccEEEEcCcccc
Confidence            9999889999999999999765

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-47  Score=320.06  Aligned_cols=248  Identities=25%  Similarity=0.325  Sum_probs=215.1

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++....  +.++.++.+|+++++  ++++++++
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~--~i~~~~~~   79 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES--NVDVSYIVADLTKRE--DLERTVKE   79 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc--CCceEEEEecCCCHH--HHHHHHHH
Confidence            457899999999999999999999999999999999 6666677666665432  257889999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +. .+|++|++|||+|.. ...++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||.++..+  .+++
T Consensus        80 ~~-~~g~iD~lv~nag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~~~--~~~~  154 (263)
T PRK08339         80 LK-NIGEPDIFFFSTGGP-KPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIKEP--IPNI  154 (263)
T ss_pred             HH-hhCCCcEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCccccCC--CCcc
Confidence            86 589999999999973 446777899999999999999999999999999998766 699999999988765  5888


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc---------cHHHHHHHhhccCCCCCCCChhhHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---------QERAVKLVREAAPLHRWLDVKNDLA  230 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva  230 (266)
                      ..|+++|+|+++|+++++.|++++|||||+|+||+|+|++......         .++..+.+....|++|+++|+ |+|
T Consensus       155 ~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dva  233 (263)
T PRK08339        155 ALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPE-EIG  233 (263)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHH-HHH
Confidence            9999999999999999999999999999999999999997643211         123334456678999999998 999


Q ss_pred             HHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          231 STVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      +.+.||+++.+.++||+++.+|||..++
T Consensus       234 ~~v~fL~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        234 YLVAFLASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             HHHHHHhcchhcCccCceEEECCCcccc
Confidence            9999999998999999999999998765

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-47  Score=315.44  Aligned_cols=246  Identities=25%  Similarity=0.413  Sum_probs=212.0

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      |++++|++|||||++|||+++|++|+++|++|+++++.+ .++..+.+...   +.++.++.+|+++.+  +++++++++
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~-~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~~~~~~~~~   77 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE-APETQAQVEAL---GRKFHFITADLIQQK--DIDSIVSQA   77 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch-HHHHHHHHHHc---CCeEEEEEeCCCCHH--HHHHHHHHH
Confidence            567899999999999999999999999999999988432 23344444332   357889999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||||.. ...++.+.+.++|+.++++|+.+++.++++++|+|.+++.+|+||++||..+..+  .+...
T Consensus        78 ~~~~g~iD~lv~~ag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~--~~~~~  154 (251)
T PRK12481         78 VEVMGHIDILINNAGII-RRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQG--GIRVP  154 (251)
T ss_pred             HHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCC--CCCCc
Confidence            99999999999999984 4567778899999999999999999999999999976543589999999988766  47788


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.|+++++.|++++|||||+|+||+|+|++.......+...+......|.+++++|+ |+|+.+.||+++.
T Consensus       155 ~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~pe-eva~~~~~L~s~~  233 (251)
T PRK12481        155 SYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPD-DLAGPAIFLSSSA  233 (251)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCcc
Confidence            999999999999999999999999999999999999998765432233334455678999999987 9999999999999


Q ss_pred             CCcccccEEEEcCCcc
Q 024517          241 SRYMTGTTIYVDGAQS  256 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~  256 (266)
                      +.+++|+.+.+|||..
T Consensus       234 ~~~~~G~~i~vdgg~~  249 (251)
T PRK12481        234 SDYVTGYTLAVDGGWL  249 (251)
T ss_pred             ccCcCCceEEECCCEe
Confidence            9999999999999964

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.8e-47  Score=319.55  Aligned_cols=247  Identities=24%  Similarity=0.292  Sum_probs=206.2

Q ss_pred             CCCCcEEEEecCCC--chHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGD--EISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~--giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      .+++|++|||||++  |||+++|++|+++|++|+++++.+...+..+++.+..  + ...++++|++|.+  ++++++++
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~--g-~~~~~~~Dv~d~~--~v~~~~~~   78 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESL--G-SDFVLPCDVEDIA--SVDAVFEA   78 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhc--C-CceEEeCCCCCHH--HHHHHHHH
Confidence            36899999999996  9999999999999999999885443333333443222  1 2357899999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCC---CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC
Q 024517           80 ACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY  156 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  156 (266)
                      +.+.+|++|++|||||....   ..++.+.+.++|++++++|+.+++.++|+++|+|.+   +|+||++||..+..+  .
T Consensus        79 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~---~G~Iv~isS~~~~~~--~  153 (271)
T PRK06505         79 LEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD---GGSMLTLTYGGSTRV--M  153 (271)
T ss_pred             HHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc---CceEEEEcCCCcccc--C
Confidence            99999999999999997432   146678899999999999999999999999999973   489999999988665  5


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      +.+..|+++|+|+.+|+|+++.|++++|||||+|+||+|+|++..................|++|+++|+ |+|+.++||
T Consensus       154 ~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-eva~~~~fL  232 (271)
T PRK06505        154 PNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTID-EVGGSALYL  232 (271)
T ss_pred             CccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHH-HHHHHHHHH
Confidence            7889999999999999999999999999999999999999998643222222233444567899999997 999999999


Q ss_pred             ccCCCCcccccEEEEcCCccccC
Q 024517          237 ISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      +++.+.++||+.+.+|||.++..
T Consensus       233 ~s~~~~~itG~~i~vdgG~~~~~  255 (271)
T PRK06505        233 LSDLSSGVTGEIHFVDSGYNIVS  255 (271)
T ss_pred             hCccccccCceEEeecCCcccCC
Confidence            99989999999999999976543

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=1.1e-46  Score=313.96  Aligned_cols=247  Identities=29%  Similarity=0.398  Sum_probs=209.8

Q ss_pred             CCCCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEEe-ccc--ccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHH
Q 024517            1 MENQAKRVLLTSDG--DEISKNIAFHLAKRGCRLVLVG-NER--RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDE   75 (266)
Q Consensus         1 m~l~~k~vlItGa~--~giG~~ia~~l~~~g~~v~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~   75 (266)
                      |++++|+++||||+  +|||+++|++|+++|++|++++ +.+  +.++..+++.+.   +.++.++.+|++|++  ++++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~--~v~~   76 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP---LNPSLFLPCDVQDDA--QIEE   76 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc---cCcceEeecCcCCHH--HHHH
Confidence            46789999999986  8999999999999999999886 332  344555555443   235678999999999  9999


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCC---CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccc
Q 024517           76 AVDKACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAE  152 (266)
Q Consensus        76 ~~~~~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~  152 (266)
                      +++++.+.+|++|++|||||+...   ..++.+.+.++|++++++|+.+++.+++.++|+|.+   +|+||++||..+..
T Consensus        77 ~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~---~g~Iv~isS~~~~~  153 (258)
T PRK07370         77 TFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE---GGSIVTLTYLGGVR  153 (258)
T ss_pred             HHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh---CCeEEEEecccccc
Confidence            999999999999999999997432   356778899999999999999999999999999975   48999999998876


Q ss_pred             cCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHH
Q 024517          153 RGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAST  232 (266)
Q Consensus       153 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  232 (266)
                      +  .+++..|+++|+|+++|+++++.|++++|||||+|+||+|+|++.......++.........|++|+++|+ |+++.
T Consensus       154 ~--~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~-dva~~  230 (258)
T PRK07370        154 A--IPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQT-EVGNT  230 (258)
T ss_pred             C--CcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHH-HHHHH
Confidence            5  68889999999999999999999999999999999999999997643221122333445567889999997 99999


Q ss_pred             HHHHccCCCCcccccEEEEcCCcccc
Q 024517          233 VIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       233 ~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      +.||+++.++++|||++.+|||..++
T Consensus       231 ~~fl~s~~~~~~tG~~i~vdgg~~~~  256 (258)
T PRK07370        231 AAFLLSDLASGITGQTIYVDAGYCIM  256 (258)
T ss_pred             HHHHhChhhccccCcEEEECCccccc
Confidence            99999999999999999999998764

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.8e-47  Score=314.65  Aligned_cols=245  Identities=24%  Similarity=0.284  Sum_probs=207.5

Q ss_pred             CCCcEEEEecCCC--chHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGD--EISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~--giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++|++|||||++  |||+++|++|+++|++|+++++.++.++..+++.+..+   ...++.+|++|++  +++++++++
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g---~~~~~~~Dv~~~~--~v~~~~~~~   80 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIG---CNFVSELDVTNPK--SISNLFDDI   80 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcC---CceEEEccCCCHH--HHHHHHHHH
Confidence            6799999999997  99999999999999999998854444555555543321   2246789999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCC---CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCC
Q 024517           81 CQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP  157 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  157 (266)
                      .+.+|++|++|||+|....   ..++.+.+.++|++.+++|+.+++.+++.++|+|.+   +|+||++||..+..+  .+
T Consensus        81 ~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~~~--~~  155 (260)
T PRK06603         81 KEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD---GGSIVTLTYYGAEKV--IP  155 (260)
T ss_pred             HHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc---CceEEEEecCccccC--CC
Confidence            9999999999999997432   246778899999999999999999999999999964   589999999888765  57


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      .+..|+++|+|+++|+++++.|++++|||||+|+||+++|++.......++..+......|++|+++|+ |+|+.+.||+
T Consensus       156 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dva~~~~~L~  234 (260)
T PRK06603        156 NYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQE-DVGGAAVYLF  234 (260)
T ss_pred             cccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHH-HHHHHHHHHh
Confidence            889999999999999999999999999999999999999997543222222334455678999999997 9999999999


Q ss_pred             cCCCCcccccEEEEcCCcccc
Q 024517          238 SDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       238 s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      |+.+.++||+.+.+|||+.+.
T Consensus       235 s~~~~~itG~~i~vdgG~~~~  255 (260)
T PRK06603        235 SELSKGVTGEIHYVDCGYNIM  255 (260)
T ss_pred             CcccccCcceEEEeCCccccc
Confidence            999999999999999997663

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-46  Score=313.60  Aligned_cols=247  Identities=21%  Similarity=0.295  Sum_probs=208.0

Q ss_pred             CCCCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDG--DEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |++++|++|||||+  +|||+++|++|+++|++|+++++.++..+..+++.+..   ....++.||+++.+  +++++++
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~--~v~~~~~   80 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL---DAPIFLPLDVREPG--QLEAVFA   80 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh---ccceEEecCcCCHH--HHHHHHH
Confidence            56889999999998  59999999999999999999984433333333443322   23568899999999  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCC---CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC
Q 024517           79 KACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL  155 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~  155 (266)
                      ++.+.||++|++|||||....   ..++.+.+.++|++++++|+.+++++++.++|+|++   +|+|+++||..+..+  
T Consensus        81 ~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~---~g~Ii~iss~~~~~~--  155 (258)
T PRK07533         81 RIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN---GGSLLTMSYYGAEKV--  155 (258)
T ss_pred             HHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc---CCEEEEEeccccccC--
Confidence            999999999999999997432   246778899999999999999999999999999963   589999999887665  


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      .+.+..|+++|+|+.+|+++++.|++++|||||+|+||+++|++.......++..+......|.+++.+|+ |+++.++|
T Consensus       156 ~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dva~~~~~  234 (258)
T PRK07533        156 VENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDID-DVGAVAAF  234 (258)
T ss_pred             CccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHH-HHHHHHHH
Confidence            57889999999999999999999999999999999999999998654322233334455678999999888 99999999


Q ss_pred             HccCCCCcccccEEEEcCCcccc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      |+++..++++|+.+.+|||.++.
T Consensus       235 L~s~~~~~itG~~i~vdgg~~~~  257 (258)
T PRK07533        235 LASDAARRLTGNTLYIDGGYHIV  257 (258)
T ss_pred             HhChhhccccCcEEeeCCccccc
Confidence            99998899999999999997653

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-46  Score=311.97  Aligned_cols=247  Identities=26%  Similarity=0.371  Sum_probs=212.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||++++++|+++|++|++++ +.++.++..+++...   +.++..+.+|+++++  ++++++++
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~--~~~~~~~~   79 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS---GGKVVPVCCDVSQHQ--QVTSMLDQ   79 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc---CCeEEEEEccCCCHH--HHHHHHHH
Confidence            567899999999999999999999999999999999 666677777666543   357889999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||+|.. ...++.+.+.++|+.++++|+.+++.+++.+.|+|.+++++++|+++||..+.........
T Consensus        80 ~~~~~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  158 (253)
T PRK05867         80 VTAELGGIDIAVCNAGII-TVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQV  158 (253)
T ss_pred             HHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCc
Confidence            999999999999999984 4567778899999999999999999999999999977654589999999877543211245


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|+|++.|++++++|++++|||||+|+||+|+|++.....   ...+.+....|.+++.+|+ |+|++++||+++
T Consensus       159 ~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~r~~~p~-~va~~~~~L~s~  234 (253)
T PRK05867        159 SHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYT---EYQPLWEPKIPLGRLGRPE-ELAGLYLYLASE  234 (253)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccch---HHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCc
Confidence            789999999999999999999999999999999999999875432   2233445667889999998 999999999999


Q ss_pred             CCCcccccEEEEcCCccc
Q 024517          240 GSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~  257 (266)
                      .++++||+.+.+|||.++
T Consensus       235 ~~~~~tG~~i~vdgG~~~  252 (253)
T PRK05867        235 ASSYMTGSDIVIDGGYTC  252 (253)
T ss_pred             ccCCcCCCeEEECCCccC
Confidence            999999999999999764

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.5e-46  Score=313.65  Aligned_cols=245  Identities=25%  Similarity=0.300  Sum_probs=207.0

Q ss_pred             CCCcEEEEecC--CCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSD--GDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa--~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++|++|||||  ++|||+++|++|+++|++|+++++.++.++..+++....   .....+.||+++++  +++++++++
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~--~v~~~~~~~   78 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAEL---DSELVFRCDVASDD--EINQVFADL   78 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhcc---CCceEEECCCCCHH--HHHHHHHHH
Confidence            67999999997  679999999999999999999875455555555554332   23467899999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCC---CC-CCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC
Q 024517           81 CQILGNLDAFVHCYTYEGKM---QD-PLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY  156 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~---~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  156 (266)
                      .++++++|++|||||.....   .+ +.+.+.++|+.++++|+.++++++|+++|.|+++  +|+||++||..+..+  .
T Consensus        79 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~--~g~Iv~iss~~~~~~--~  154 (261)
T PRK08690         79 GKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR--NSAIVALSYLGAVRA--I  154 (261)
T ss_pred             HHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc--CcEEEEEcccccccC--C
Confidence            99999999999999984321   12 3457788999999999999999999999998654  489999999988765  5


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      +++..|+++|+|+++|+++++.|++++|||||+|+||+|+|++........+....+....|++|+++|+ |+|+.+.||
T Consensus       155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-evA~~v~~l  233 (261)
T PRK08690        155 PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIE-EVGNTAAFL  233 (261)
T ss_pred             CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHH-HHHHHHHHH
Confidence            8889999999999999999999999999999999999999998654322233334455668999999998 999999999


Q ss_pred             ccCCCCcccccEEEEcCCccc
Q 024517          237 ISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +++.+.++||+.|.+|||..+
T Consensus       234 ~s~~~~~~tG~~i~vdgG~~~  254 (261)
T PRK08690        234 LSDLSSGITGEITYVDGGYSI  254 (261)
T ss_pred             hCcccCCcceeEEEEcCCccc
Confidence            999999999999999999765

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=2.1e-46  Score=311.46  Aligned_cols=256  Identities=32%  Similarity=0.471  Sum_probs=216.7

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      +.+++|++||||+++|||+++|++|+++|++|++++ +.+++++..+.+......+.++..+.||+++.+  ++++++++
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~--~~~~l~~~   81 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEV--DVEKLVEF   81 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHH--HHHHHHHH
Confidence            358999999999999999999999999999999999 778888888887665444567999999999998  99999999


Q ss_pred             HHHH-hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchH-HHHHHHHHHHHHhccCCCCeEEEEecccccccCCCC
Q 024517           80 ACQI-LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVA-PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP  157 (266)
Q Consensus        80 ~~~~-~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~-~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  157 (266)
                      ..++ +|+||++|||||......++.+.+.++|++++++|++| .+.+.+.+.|.+.+++ +|.|+++||..+..+.  +
T Consensus        82 ~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~-gg~I~~~ss~~~~~~~--~  158 (270)
T KOG0725|consen   82 AVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSK-GGSIVNISSVAGVGPG--P  158 (270)
T ss_pred             HHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcC-CceEEEEeccccccCC--C
Confidence            9998 79999999999986555579999999999999999996 5555555556565555 8999999999887663  3


Q ss_pred             Cc-hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc---cHHHHHH--HhhccCCCCCCCChhhHHH
Q 024517          158 GA-AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---QERAVKL--VREAAPLHRWLDVKNDLAS  231 (266)
Q Consensus       158 ~~-~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~dva~  231 (266)
                      +. ..|+++|+|+.+|+|+++.||.++|||||+|+||.+.|++......   .+++.+.  .....|.+|+++|+ |+++
T Consensus       159 ~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~-eva~  237 (270)
T KOG0725|consen  159 GSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPE-EVAE  237 (270)
T ss_pred             CCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHH-HHHH
Confidence            33 7999999999999999999999999999999999999998211111   1233333  44577999999998 9999


Q ss_pred             HHHHHccCCCCcccccEEEEcCCccccCCCc
Q 024517          232 TVIYLISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       232 ~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      .+.||+++.++|++|+.+.+|||.++..+..
T Consensus       238 ~~~fla~~~asyitG~~i~vdgG~~~~~~~~  268 (270)
T KOG0725|consen  238 AAAFLASDDASYITGQTIIVDGGFTVVGPSL  268 (270)
T ss_pred             hHHhhcCcccccccCCEEEEeCCEEeecccc
Confidence            9999999987799999999999999877654

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.3e-46  Score=311.83  Aligned_cols=248  Identities=26%  Similarity=0.333  Sum_probs=207.5

Q ss_pred             CCCCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDG--DEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |++++|++|||||+  +|||+++|++|+++|++|+++++..+.++..+++.+... +.++.++.+|++|++  +++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~--~v~~~~~   79 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE-GQESLLLPCDVTSDE--EITACFE   79 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC-CCceEEEecCCCCHH--HHHHHHH
Confidence            45789999999997  899999999999999999998743333333333433322 357889999999999  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCC---CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC
Q 024517           79 KACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL  155 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~  155 (266)
                      ++.+.+|++|++|||||+...   ..++.+.+.++|+..+++|+.+++.+++.++|+|.+   +|+||++||..+..+  
T Consensus        80 ~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~Iv~isS~~~~~~--  154 (257)
T PRK08594         80 TIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE---GGSIVTLTYLGGERV--  154 (257)
T ss_pred             HHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc---CceEEEEcccCCccC--
Confidence            999999999999999997432   246677889999999999999999999999999964   589999999988766  


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      .+.+..|+++|+|+++|+++++.|++++|||||+|+||+++|++........+.........|.+|+.+|+ |+++.++|
T Consensus       155 ~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-~va~~~~~  233 (257)
T PRK08594        155 VQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQE-EVGDTAAF  233 (257)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHH-HHHHHHHH
Confidence            57889999999999999999999999999999999999999997543211122223345567888988887 99999999


Q ss_pred             HccCCCCcccccEEEEcCCccc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      |+++.++++||+++.+|||..+
T Consensus       234 l~s~~~~~~tG~~~~~dgg~~~  255 (257)
T PRK08594        234 LFSDLSRGVTGENIHVDSGYHI  255 (257)
T ss_pred             HcCcccccccceEEEECCchhc
Confidence            9999999999999999999754

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-46  Score=310.10  Aligned_cols=251  Identities=24%  Similarity=0.367  Sum_probs=218.3

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||++++++|+++|++|++++ +.++++++.+++...   +.++.++.+|+++++  ++++++++
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~   76 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE---GGEAVALAGDVRDEA--YAKALVAL   76 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEcCCCCHH--HHHHHHHH
Confidence            678999999999999999999999999999999999 666677776666543   357889999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||......++.+.+.++|+.++++|+.+++.+++.++|+|.+.+ .++||++||..+.... .+.+
T Consensus        77 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~~~-~~~~  154 (254)
T PRK07478         77 AVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHTAG-FPGM  154 (254)
T ss_pred             HHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhccC-CCCc
Confidence            9999999999999999854556777889999999999999999999999999998766 6899999998875322 5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|+++++.|++++||+||+|+||+++|++.......+..........|.+++.+|+ |+++.++||+++
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~s~  233 (254)
T PRK07478        155 AAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPE-EIAQAALFLASD  233 (254)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCc
Confidence            9999999999999999999999999999999999999998765433334444455567888888887 999999999998


Q ss_pred             CCCcccccEEEEcCCccccC
Q 024517          240 GSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~~  259 (266)
                      ...+++|+.+.+|||.++.+
T Consensus       234 ~~~~~~G~~~~~dgg~~~~~  253 (254)
T PRK07478        234 AASFVTGTALLVDGGVSITR  253 (254)
T ss_pred             hhcCCCCCeEEeCCchhccC
Confidence            88999999999999987653

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-45  Score=307.48  Aligned_cols=247  Identities=24%  Similarity=0.326  Sum_probs=214.4

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++|++|||||++|||+++|++|+++|++|++++ +.++.++..+++..... +.++.++.+|+++++  +++++++++.
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~--~~~~~~~~~~   81 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVA-GARVLAVPADVTDAA--SVAAAVAAAE   81 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccC-CceEEEEEccCCCHH--HHHHHHHHHH
Confidence            6799999999999999999999999999999999 66667777777754212 357889999999998  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.++++|++|||||.. ...++.+.+.++|+.++++|+.+++.++++++|+|.+++ .|+||++||..+..+  .++...
T Consensus        82 ~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~~  157 (260)
T PRK07063         82 EAFGPLDVLVNNAGIN-VFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNIASTHAFKI--IPGCFP  157 (260)
T ss_pred             HHhCCCcEEEECCCcC-CCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEECChhhccC--CCCchH
Confidence            9999999999999974 445566788999999999999999999999999998765 689999999988766  578889


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc----ccHHHHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV----GQERAVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      |+++|++++.|+++++.|++++|||||+|+||+++|++.....    ..+..........|++|+++|+ |+|+.++||+
T Consensus       158 Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~va~~~~fl~  236 (260)
T PRK07063        158 YPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPE-EVAMTAVFLA  236 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHc
Confidence            9999999999999999999999999999999999999865321    1122233445678999999998 9999999999


Q ss_pred             cCCCCcccccEEEEcCCccc
Q 024517          238 SDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       238 s~~~~~~~G~~i~~dgG~~~  257 (266)
                      ++.+.++||+.+.+|||.+.
T Consensus       237 s~~~~~itG~~i~vdgg~~~  256 (260)
T PRK07063        237 SDEAPFINATCITIDGGRSV  256 (260)
T ss_pred             CccccccCCcEEEECCCeee
Confidence            99999999999999999765

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.5e-45  Score=307.52  Aligned_cols=246  Identities=22%  Similarity=0.245  Sum_probs=203.3

Q ss_pred             CCCcEEEEecC--CCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSD--GDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa--~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++|++|||||  ++|||+++|++|+++|++|+++++.++.++..+++.+..+   ....+.+|++|++  +++++++++
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~--~v~~~~~~~   78 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG---SDLVFPCDVASDE--QIDALFASL   78 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcC---CcceeeccCCCHH--HHHHHHHHH
Confidence            57899999996  6899999999999999999998743333344444433322   2357899999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCC---CC-CCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC
Q 024517           81 CQILGNLDAFVHCYTYEGKM---QD-PLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY  156 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~---~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  156 (266)
                      .+++|++|++|||||.....   .+ +.+.+.++|+..+++|+.+++.++|+++|+|.+   +|+||++||..+..+  .
T Consensus        79 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~---~g~Ii~iss~~~~~~--~  153 (260)
T PRK06997         79 GQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD---DASLLTLSYLGAERV--V  153 (260)
T ss_pred             HHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC---CceEEEEeccccccC--C
Confidence            99999999999999974321   12 345788999999999999999999999999943   589999999988665  5


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      +.+.+|+++|+|+++|+++++.|++++|||||+|+||+|+|++.......++..+......|++|+++|+ |+++.+.||
T Consensus       154 ~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dva~~~~~l  232 (260)
T PRK06997        154 PNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIE-EVGNVAAFL  232 (260)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHH-HHHHHHHHH
Confidence            7888999999999999999999999999999999999999987543221122333445567899999998 999999999


Q ss_pred             ccCCCCcccccEEEEcCCccccC
Q 024517          237 ISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      +++.+.++||++|.+|||.+.-.
T Consensus       233 ~s~~~~~itG~~i~vdgg~~~~~  255 (260)
T PRK06997        233 LSDLASGVTGEITHVDSGFNAVV  255 (260)
T ss_pred             hCccccCcceeEEEEcCChhhcc
Confidence            99989999999999999976543

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.6e-45  Score=309.13  Aligned_cols=245  Identities=23%  Similarity=0.276  Sum_probs=204.8

Q ss_pred             CCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDG--DEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++|++|||||+  +|||+++|++|+++|++|+++++.++..+..+++.+..   .....+.+|+++++  +++++++++
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~--~v~~~~~~~   82 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAEL---GAFVAGHCDVTDEA--SIDAVFETL   82 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhc---CCceEEecCCCCHH--HHHHHHHHH
Confidence            578999999997  89999999999999999998875444444444444332   23567899999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCC---CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCC
Q 024517           81 CQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP  157 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  157 (266)
                      .+.+|++|++|||||+...   ..++.+.+.++|+.++++|+.+++.+++.++|+|.+   +|+||++||..+..+  .+
T Consensus        83 ~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~iss~~~~~~--~p  157 (272)
T PRK08159         83 EKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD---GGSILTLTYYGAEKV--MP  157 (272)
T ss_pred             HHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC---CceEEEEeccccccC--CC
Confidence            9999999999999997432   246678899999999999999999999999999964   589999999877655  68


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      .+..|+++|+|+.+|+++++.|+.++|||||+|+||+++|++............+.....|++|+++|+ |+|+.++||+
T Consensus       158 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-evA~~~~~L~  236 (272)
T PRK08159        158 HYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIE-EVGDSALYLL  236 (272)
T ss_pred             cchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHH-HHHHHHHHHh
Confidence            889999999999999999999999999999999999999987543211112222233467888998887 9999999999


Q ss_pred             cCCCCcccccEEEEcCCcccc
Q 024517          238 SDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       238 s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      ++.+.++||++|.+|||+.+.
T Consensus       237 s~~~~~itG~~i~vdgG~~~~  257 (272)
T PRK08159        237 SDLSRGVTGEVHHVDSGYHVV  257 (272)
T ss_pred             CccccCccceEEEECCCceee
Confidence            998999999999999997643

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-45  Score=303.80  Aligned_cols=248  Identities=25%  Similarity=0.366  Sum_probs=212.7

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-ccc-ccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NER-RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+ .+++..+++...   +.++.++.+|+++++  +++++++
T Consensus         4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~--~i~~~~~   78 (254)
T PRK06114          4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA---GRRAIQIAADVTSKA--DLRAAVA   78 (254)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc---CCceEEEEcCCCCHH--HHHHHHH
Confidence            568899999999999999999999999999999998 433 345566666543   357889999999998  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|.|.+++ .++||++||..+..+.+.+.
T Consensus        79 ~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~  156 (254)
T PRK06114         79 RTEAELGALTLAVNAAGIA-NANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSGIIVNRGLL  156 (254)
T ss_pred             HHHHHcCCCCEEEECCCCC-CCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCCCCC
Confidence            9999999999999999984 446677889999999999999999999999999998766 68999999998876532234


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ...|+++|+|++.++++++.|+.++|||||+|+||+++|++.... ...+..+.+....|++|+++|+ |+++.++||++
T Consensus       157 ~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~p~~r~~~~~-dva~~~~~l~s  234 (254)
T PRK06114        157 QAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP-EMVHQTKLFEEQTPMQRMAKVD-EMVGPAVFLLS  234 (254)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc-cchHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcC
Confidence            689999999999999999999999999999999999999987532 1122234455678999999998 99999999999


Q ss_pred             CCCCcccccEEEEcCCccc
Q 024517          239 DGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~~  257 (266)
                      +.++++||+++.+|||...
T Consensus       235 ~~~~~~tG~~i~~dgg~~~  253 (254)
T PRK06114        235 DAASFCTGVDLLVDGGFVC  253 (254)
T ss_pred             ccccCcCCceEEECcCEec
Confidence            9999999999999999865

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.5e-45  Score=306.13  Aligned_cols=244  Identities=23%  Similarity=0.291  Sum_probs=204.2

Q ss_pred             CCCcEEEEecCCC--chHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGD--EISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~--giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++|++|||||++  |||+++|++|+++|++|+++++.++.++..+++....   .....+.||++|++  +++++++++
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~--~v~~~~~~~   78 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQL---GSDIVLPCDVAEDA--SIDAMFAEL   78 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhcc---CCceEeecCCCCHH--HHHHHHHHH
Confidence            5799999999986  9999999999999999999885455556666665442   34678899999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCC----CCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC
Q 024517           81 CQILGNLDAFVHCYTYEGKMQ----DPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY  156 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  156 (266)
                      .+.||++|++|||||+.....    ++.+.+.++|+.++++|+.+++.+++.+.|.|.+   +|+|+++||..+..+  .
T Consensus        79 ~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~Iv~iss~~~~~~--~  153 (262)
T PRK07984         79 GKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAERA--I  153 (262)
T ss_pred             HhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC---CcEEEEEecCCCCCC--C
Confidence            999999999999999742211    1456788999999999999999999999986643   589999999887655  6


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      +.+..|+++|+|+++|+++++.|++++|||||+|+||+++|++...........+......|.+++++|+ |+++.++||
T Consensus       154 ~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dva~~~~~L  232 (262)
T PRK07984        154 PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIE-DVGNSAAFL  232 (262)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHH-HHHHHHHHH
Confidence            8889999999999999999999999999999999999999986532211122333445568899999997 999999999


Q ss_pred             ccCCCCcccccEEEEcCCccc
Q 024517          237 ISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +++..++++|+.+.+|||..+
T Consensus       233 ~s~~~~~itG~~i~vdgg~~~  253 (262)
T PRK07984        233 CSDLSAGISGEVVHVDGGFSI  253 (262)
T ss_pred             cCcccccccCcEEEECCCccc
Confidence            999889999999999999653

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=4.3e-45  Score=308.56  Aligned_cols=253  Identities=22%  Similarity=0.271  Sum_probs=208.7

Q ss_pred             CCCCCcEEEEecC--CCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcc-------cCCC---CCeEEEEEec--C
Q 024517            1 MENQAKRVLLTSD--GDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGS-------LKGG---QPVEVVGLDM--E   66 (266)
Q Consensus         1 m~l~~k~vlItGa--~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-------~~~~---~~~~~~~~D~--~   66 (266)
                      |+|+||++|||||  ++|||+++|++|+++|++|++..+.++++++...+.+.       ...+   .....+.+|+  +
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   84 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILVGTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFD   84 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecC
Confidence            6789999999999  89999999999999999999933777787777666431       0111   1256788999  3


Q ss_pred             CCc----------------hHHHHHHHHHHHHHhCCCCEEEEcCCCCC-CCCCCCCCCHHHHHHHHHccchHHHHHHHHH
Q 024517           67 EDR----------------EGAFDEAVDKACQILGNLDAFVHCYTYEG-KMQDPLQVGEDEFKKLVKINFVAPWFLLKAV  129 (266)
Q Consensus        67 ~~~----------------~~~v~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  129 (266)
                      +.+                +++++++++++.+.||++|++|||||... ...++.+.+.++|++++++|+.+++.++|.+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~  164 (303)
T PLN02730         85 TPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHF  164 (303)
T ss_pred             ccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            322                23799999999999999999999998532 2367888999999999999999999999999


Q ss_pred             HHHHhccCCCCeEEEEecccccccCCCCCc-hhhHHhHHHHHHHHHHHHHHhCC-CCcEEEEEecCcccCCCcccccccH
Q 024517          130 GRRMKESKAGGSIVFLTSIIGAERGLYPGA-AAYGACAASIHQLVRTAAMEIGK-HKIRVNGIARGLHLQDEYPIAVGQE  207 (266)
Q Consensus       130 ~~~~~~~~~~g~iv~iss~~~~~~~~~~~~-~~y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~pG~v~t~~~~~~~~~~  207 (266)
                      +|.|.+   .|+||++||..+..+  .+.+ ..|+++|+|+++|+++++.|+++ +|||||+|+||+|+|++.......+
T Consensus       165 ~p~m~~---~G~II~isS~a~~~~--~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~  239 (303)
T PLN02730        165 GPIMNP---GGASISLTYIASERI--IPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFID  239 (303)
T ss_pred             HHHHhc---CCEEEEEechhhcCC--CCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccH
Confidence            999975   489999999988766  4654 58999999999999999999986 7999999999999999875421123


Q ss_pred             HHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccC
Q 024517          208 RAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      +.........|+.|+.+|+ |+++.++||+|+.+++++|+.+.+|||.+.+.
T Consensus       240 ~~~~~~~~~~pl~r~~~pe-evA~~~~fLaS~~a~~itG~~l~vdGG~~~~g  290 (303)
T PLN02730        240 DMIEYSYANAPLQKELTAD-EVGNAAAFLASPLASAITGATIYVDNGLNAMG  290 (303)
T ss_pred             HHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCccccCccCCEEEECCCccccc
Confidence            3333344556888888887 99999999999999999999999999987665

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=4.3e-46  Score=307.52  Aligned_cols=233  Identities=30%  Similarity=0.472  Sum_probs=209.0

Q ss_pred             cCC--CchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh-CCC
Q 024517           12 SDG--DEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL-GNL   87 (266)
Q Consensus        12 Ga~--~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~-g~i   87 (266)
                      |++  +|||+++|++|+++|++|++++ +.+++++..+++.+..+    ..++.+|+++++  +++++++++.+.+ |+|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~----~~~~~~D~~~~~--~v~~~~~~~~~~~~g~i   74 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG----AEVIQCDLSDEE--SVEALFDEAVERFGGRI   74 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT----SEEEESCTTSHH--HHHHHHHHHHHHHCSSE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC----CceEeecCcchH--HHHHHHHHHHhhcCCCe
Confidence            666  9999999999999999999999 66666666667766543    236999999988  9999999999999 999


Q ss_pred             CEEEEcCCCCCC---CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHH
Q 024517           88 DAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA  164 (266)
Q Consensus        88 d~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~  164 (266)
                      |++|||+|...+   ..++.+.+.++|+..+++|+.+++.++|++.|+|.+   +|+||++||..+..+  .+++..|++
T Consensus        75 D~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~gsii~iss~~~~~~--~~~~~~y~~  149 (241)
T PF13561_consen   75 DILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK---GGSIINISSIAAQRP--MPGYSAYSA  149 (241)
T ss_dssp             SEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH---EEEEEEEEEGGGTSB--STTTHHHHH
T ss_pred             EEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCCcccccchhhccc--CccchhhHH
Confidence            999999998543   367888899999999999999999999999998877   589999999988777  688999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCc
Q 024517          165 CAASIHQLVRTAAMEIGK-HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY  243 (266)
Q Consensus       165 sK~a~~~~~~~la~e~~~-~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  243 (266)
                      +|+|+++|+|+++.||++ +|||||+|+||+++|++.......++..+.+.+..|++|+++|+ |+|+++.||+|+.+++
T Consensus       150 sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~-evA~~v~fL~s~~a~~  228 (241)
T PF13561_consen  150 SKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPE-EVANAVLFLASDAASY  228 (241)
T ss_dssp             HHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHH-HHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHH-HHHHHHHHHhCccccC
Confidence            999999999999999999 99999999999999998766555567788888999999999887 9999999999999999


Q ss_pred             ccccEEEEcCCcc
Q 024517          244 MTGTTIYVDGAQS  256 (266)
Q Consensus       244 ~~G~~i~~dgG~~  256 (266)
                      +|||+|.+|||++
T Consensus       229 itG~~i~vDGG~s  241 (241)
T PF13561_consen  229 ITGQVIPVDGGFS  241 (241)
T ss_dssp             GTSEEEEESTTGG
T ss_pred             ccCCeEEECCCcC
Confidence            9999999999975

...

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-45  Score=304.27  Aligned_cols=248  Identities=23%  Similarity=0.340  Sum_probs=212.8

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-c-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-N-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ + .+.+++..+++....  +.++.++.+|+++++  ++++++++
T Consensus         5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~--~~~~~~~~   80 (260)
T PRK08416          5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKY--GIKAKAYPLNILEPE--TYKELFKK   80 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhc--CCceEEEEcCCCCHH--HHHHHHHH
Confidence            47899999999999999999999999999999886 3 344555555554322  357899999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCC-----CCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC
Q 024517           80 ACQILGNLDAFVHCYTYEG-----KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG  154 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~  154 (266)
                      +.+.++++|++|||||..+     ...++.+.+.+++++++++|+.+++.+++.++|+|.+.+ .|+||++||..+..+ 
T Consensus        81 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-  158 (260)
T PRK08416         81 IDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGNLVY-  158 (260)
T ss_pred             HHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEeccccccC-
Confidence            9999999999999998642     124566778899999999999999999999999998765 689999999887665 


Q ss_pred             CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHH
Q 024517          155 LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI  234 (266)
Q Consensus       155 ~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (266)
                       .+.+..|+++|++++.|+++++.|++++|||||+|+||+++|++.......++..+......|.+|+.+|+ |+++.++
T Consensus       159 -~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~-~va~~~~  236 (260)
T PRK08416        159 -IENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPE-DLAGACL  236 (260)
T ss_pred             -CCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHH-HHHHHHH
Confidence             57889999999999999999999999999999999999999998655433344445556678888999987 9999999


Q ss_pred             HHccCCCCcccccEEEEcCCccc
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      ||+++...+++|+.+.+|||.++
T Consensus       237 ~l~~~~~~~~~G~~i~vdgg~~~  259 (260)
T PRK08416        237 FLCSEKASWLTGQTIVVDGGTTF  259 (260)
T ss_pred             HHcChhhhcccCcEEEEcCCeec
Confidence            99998889999999999999765

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=1.3e-44  Score=300.74  Aligned_cols=246  Identities=22%  Similarity=0.364  Sum_probs=211.7

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      |++++|++|||||++|||+++|++|+++|++|+++++.+ .++..+.+...   +.++.++.+|+++.+  +++++++++
T Consensus         6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~-~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~~~~~~~~~   79 (253)
T PRK08993          6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE-PTETIEQVTAL---GRRFLSLTADLRKID--GIPALLERA   79 (253)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc-hHHHHHHHHhc---CCeEEEEECCCCCHH--HHHHHHHHH
Confidence            567899999999999999999999999999999887432 34444555432   357889999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .++++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++++.|+|.+++.+|+||++||..+..+  .+...
T Consensus        80 ~~~~~~~D~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~  156 (253)
T PRK08993         80 VAEFGHIDILVNNAGLI-RREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQG--GIRVP  156 (253)
T ss_pred             HHHhCCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccC--CCCCc
Confidence            99999999999999984 4456778889999999999999999999999999977643589999999988766  47788


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|+|+++++++++.|+.++||+||+|+||+++|++.......+...+...+..|.+|+.+|+ |+++.+.||+++.
T Consensus       157 ~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-eva~~~~~l~s~~  235 (253)
T PRK08993        157 SYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPS-DLMGPVVFLASSA  235 (253)
T ss_pred             chHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCcc
Confidence            999999999999999999999999999999999999998754332333334455678999999987 9999999999999


Q ss_pred             CCcccccEEEEcCCcc
Q 024517          241 SRYMTGTTIYVDGAQS  256 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~  256 (266)
                      +.+++|+++.+|||..
T Consensus       236 ~~~~~G~~~~~dgg~~  251 (253)
T PRK08993        236 SDYINGYTIAVDGGWL  251 (253)
T ss_pred             ccCccCcEEEECCCEe
Confidence            9999999999999964

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-44  Score=300.76  Aligned_cols=247  Identities=21%  Similarity=0.377  Sum_probs=217.5

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||++++++|+++|++|++++ +.+++++..+++...   +.++.++.+|+++.+  ++++++++
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~--~~~~~~~~   79 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE---GIKAHAAPFNVTHKQ--EVEAAIEH   79 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc---CCeEEEEecCCCCHH--HHHHHHHH
Confidence            567899999999999999999999999999999999 666666666666543   346788999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||+|.. ...++.+.+.++|++++++|+.+++.+++.+.++|.+++ .++||++||..+..+  .+..
T Consensus        80 ~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~--~~~~  155 (254)
T PRK08085         80 IEKDIGPIDVLINNAGIQ-RRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-AGKIINICSMQSELG--RDTI  155 (254)
T ss_pred             HHHhcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccchhccC--CCCC
Confidence            999999999999999974 556777889999999999999999999999999997765 689999999887666  5778


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.++++++.|++++|||+|+|+||+++|++.......+....+.....|++++++|+ |+++.+.+|+++
T Consensus       156 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~va~~~~~l~~~  234 (254)
T PRK08085        156 TPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQ-ELIGAAVFLSSK  234 (254)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCc
Confidence            8999999999999999999999999999999999999998765443344455566778999999987 999999999999


Q ss_pred             CCCcccccEEEEcCCccc
Q 024517          240 GSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~  257 (266)
                      .++++||+.+.+|||...
T Consensus       235 ~~~~i~G~~i~~dgg~~~  252 (254)
T PRK08085        235 ASDFVNGHLLFVDGGMLV  252 (254)
T ss_pred             cccCCcCCEEEECCCeee
Confidence            999999999999999754

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.7e-44  Score=303.13  Aligned_cols=246  Identities=22%  Similarity=0.320  Sum_probs=211.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +++|++|||||++|||+++|++|+++|++|+++++.+++++..+++.+.   +.++.++.+|+++.+  +++++++++.+
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~~~~~~~~~~~   78 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSN---GGKAKAYHVDISDEQ--QVKDFASEIKE   78 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHhc---CCeEEEEEeecCCHH--HHHHHHHHHHH
Confidence            6799999999999999999999999999999999447777777776543   357899999999999  99999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhh
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY  162 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y  162 (266)
                      .++++|++|||||......++.+.+.++|++++++|+.+++.+++.++|+|.++  +|+||++||..+..+  .+....|
T Consensus        79 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~--~~~~~~Y  154 (272)
T PRK08589         79 QFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ--GGSIINTSSFSGQAA--DLYRSGY  154 (272)
T ss_pred             HcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEeCchhhcCC--CCCCchH
Confidence            999999999999985444567788899999999999999999999999999765  389999999988766  5778899


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc--HH----HHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          163 GACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ--ER----AVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      +++|+|++.|+++++.|+.++|||||+|+||+|+|++.......  ..    +........|.+++.+|+ |+++.+++|
T Consensus       155 ~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l  233 (272)
T PRK08589        155 NAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPE-EVAKLVVFL  233 (272)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHH-HHHHHHHHH
Confidence            99999999999999999999999999999999999987653321  11    111222356888888887 999999999


Q ss_pred             ccCCCCcccccEEEEcCCcccc
Q 024517          237 ISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      +++..++++|+.+.+|||....
T Consensus       234 ~s~~~~~~~G~~i~vdgg~~~~  255 (272)
T PRK08589        234 ASDDSSFITGETIRIDGGVMAY  255 (272)
T ss_pred             cCchhcCcCCCEEEECCCcccC
Confidence            9998899999999999997644

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-44  Score=302.29  Aligned_cols=248  Identities=20%  Similarity=0.283  Sum_probs=213.8

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++.+.++ +.++.++.+|+++.+  +++++++++
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~--~v~~~~~~~   81 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFP-GARLLAARCDVLDEA--DVAAFAAAV   81 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCC-CceEEEEEecCCCHH--HHHHHHHHH
Confidence            46799999999999999999999999999999999 66667777777765433 247889999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||||. ....++.+.+.++|++.+++|+.+++.+++.++|+|++.+ .|+||++||..+..+  .+...
T Consensus        82 ~~~~g~id~li~~Ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~  157 (265)
T PRK07062         82 EARFGGVDMLVNNAGQ-GRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLALQP--EPHMV  157 (265)
T ss_pred             HHhcCCCCEEEECCCC-CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEeccccccCC--CCCch
Confidence            9999999999999998 4556778889999999999999999999999999998765 689999999988776  57889


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--------cHHHHHHH--hhccCCCCCCCChhhHH
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--------QERAVKLV--REAAPLHRWLDVKNDLA  230 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--------~~~~~~~~--~~~~~~~~~~~~~~dva  230 (266)
                      .|+++|+++..|+++++.|+.++|||||+|+||+|+|+++...+.        .+...+..  ....|++|+++|+ |+|
T Consensus       158 ~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-~va  236 (265)
T PRK07062        158 ATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPD-EAA  236 (265)
T ss_pred             HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHH-HHH
Confidence            999999999999999999999999999999999999998653221        01111111  2457889999998 999


Q ss_pred             HHHHHHccCCCCcccccEEEEcCCccc
Q 024517          231 STVIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +.++||+++.+.++||+.+.+|||..+
T Consensus       237 ~~~~~L~s~~~~~~tG~~i~vdgg~~~  263 (265)
T PRK07062        237 RALFFLASPLSSYTTGSHIDVSGGFAR  263 (265)
T ss_pred             HHHHHHhCchhcccccceEEEcCceEe
Confidence            999999998889999999999999654

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=2.3e-44  Score=285.25  Aligned_cols=225  Identities=25%  Similarity=0.340  Sum_probs=199.0

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|+++|||||+|||.++|++|+++|++|++++ |.++++++++++.+     ..+..+..|++|.+  +++++++.+
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~-----~~~~~~~~DVtD~~--~~~~~i~~~   75 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA-----GAALALALDVTDRA--AVEAAIEAL   75 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc-----CceEEEeeccCCHH--HHHHHHHHH
Confidence            35789999999999999999999999999999999 88889999988843     47899999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.|++||+||||||.. ...++.+.+.++|+.|+++|++|.++.+++++|.|.+++ .|.||++||+++..+  +|+..
T Consensus        76 ~~~~g~iDiLvNNAGl~-~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~~~--y~~~~  151 (246)
T COG4221          76 PEEFGRIDILVNNAGLA-LGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGRYP--YPGGA  151 (246)
T ss_pred             HHhhCcccEEEecCCCC-cCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEecccccccc--CCCCc
Confidence            99999999999999995 448999999999999999999999999999999999988 799999999999998  89999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccH---HHHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE---RAVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      .|+++|+++..|++.|++|+..++|||..|+||.+.|..+.....+.   ...+.+...    ...+|+ |+|+++.|.+
T Consensus       152 vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~----~~l~p~-dIA~~V~~~~  226 (246)
T COG4221         152 VYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGG----TALTPE-DIAEAVLFAA  226 (246)
T ss_pred             cchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhccC----CCCCHH-HHHHHHHHHH
Confidence            99999999999999999999999999999999999887776654332   222222222    335676 9999999999


Q ss_pred             cCCCC
Q 024517          238 SDGSR  242 (266)
Q Consensus       238 s~~~~  242 (266)
                      +.+..
T Consensus       227 ~~P~~  231 (246)
T COG4221         227 TQPQH  231 (246)
T ss_pred             hCCCc
Confidence            86543

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-44  Score=298.28  Aligned_cols=247  Identities=21%  Similarity=0.332  Sum_probs=213.9

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      |++++|++|||||++|||++++++|+++|++|+++++.++.++..+.+.+.   +.++.++.+|+++.+  +++++++++
T Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~i~~~~~~~   85 (258)
T PRK06935         11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKE---GRKVTFVQVDLTKPE--SAEKVVKEA   85 (258)
T ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhc---CCceEEEEcCCCCHH--HHHHHHHHH
Confidence            457899999999999999999999999999999998445556665555432   357889999999988  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||+|.. ...++.+.+.++|+..+++|+.+++.+++.++|+|.+++ .|+||++||..+..+  .+...
T Consensus        86 ~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~  161 (258)
T PRK06935         86 LEEFGKIDILVNNAGTI-RRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSFQG--GKFVP  161 (258)
T ss_pred             HHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHhccC--CCCch
Confidence            99999999999999984 446777888999999999999999999999999998776 689999999988766  47788


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.+++++++|+.+.|||||+|+||+++|++.......+..........|.+++.+|+ |+++.+.||+++.
T Consensus       162 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~s~~  240 (258)
T PRK06935        162 AYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPD-DLMGAAVFLASRA  240 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHH-HHHHHHHHHcChh
Confidence            999999999999999999999999999999999999998654333233333445678889999998 9999999999999


Q ss_pred             CCcccccEEEEcCCccc
Q 024517          241 SRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~  257 (266)
                      +++++|+++.+|||...
T Consensus       241 ~~~~~G~~i~~dgg~~~  257 (258)
T PRK06935        241 SDYVNGHILAVDGGWLV  257 (258)
T ss_pred             hcCCCCCEEEECCCeec
Confidence            99999999999999653

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-43  Score=294.58  Aligned_cols=247  Identities=26%  Similarity=0.345  Sum_probs=216.7

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||++++++|+++|++|++++ +.++++++.+++.+.   +.++.++.+|+++.+  ++++++++
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~   78 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA---GGKAEALACHIGEME--QIDALFAH   78 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEEcCCCCHH--HHHHHHHH
Confidence            578899999999999999999999999999999999 556666666666543   346788999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||+|......++.+.+.++++..+++|+.+++.++++++|+|.+.+ .++|+++||..+..+  .+++
T Consensus        79 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~--~~~~  155 (252)
T PRK07035         79 IRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGVSP--GDFQ  155 (252)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchhhcCC--CCCC
Confidence            9999999999999998744446677888999999999999999999999999998765 689999999988766  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|++++++|+.++||+||+|+||+++|++.......+..........|..++.+|+ |+|+.+++|+++
T Consensus       156 ~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~~~  234 (252)
T PRK07035        156 GIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPS-EMAGAVLYLASD  234 (252)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHH-HHHHHHHHHhCc
Confidence            9999999999999999999999999999999999999998766544444445556677888999988 999999999999


Q ss_pred             CCCcccccEEEEcCCcc
Q 024517          240 GSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~  256 (266)
                      ...+++|+++.+|||++
T Consensus       235 ~~~~~~g~~~~~dgg~~  251 (252)
T PRK07035        235 ASSYTTGECLNVDGGYL  251 (252)
T ss_pred             cccCccCCEEEeCCCcC
Confidence            99999999999999964

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.6e-44  Score=296.94  Aligned_cols=245  Identities=26%  Similarity=0.283  Sum_probs=201.1

Q ss_pred             CCCCcEEEEecC--CCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSD--GDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa--~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      .+++|+++||||  ++|||+++|++|+++|++|+++++... ++..+++.+..+  .++.++.+|+++++  ++++++++
T Consensus         4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~-~~~~~~~~~~~~--~~~~~~~~Dv~~~~--~i~~~~~~   78 (256)
T PRK07889          4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRA-LRLTERIAKRLP--EPAPVLELDVTNEE--HLASLADR   78 (256)
T ss_pred             cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccc-hhHHHHHHHhcC--CCCcEEeCCCCCHH--HHHHHHHH
Confidence            368999999999  899999999999999999999883321 122222322222  36778999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCC---CCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC
Q 024517           80 ACQILGNLDAFVHCYTYEGKM---QDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY  156 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  156 (266)
                      +.+.++++|++|||||+....   .++.+.+.++|++++++|+.+++.+++.++|+|.+   +|+|+++++.. ..+  .
T Consensus        79 ~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~---~g~Iv~is~~~-~~~--~  152 (256)
T PRK07889         79 VREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE---GGSIVGLDFDA-TVA--W  152 (256)
T ss_pred             HHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc---CceEEEEeecc-ccc--C
Confidence            999999999999999984221   35667788999999999999999999999999974   58999998753 223  5


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCC-CCCCChhhHHHHHHH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH-RWLDVKNDLASTVIY  235 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~  235 (266)
                      +.+..|++||+|+++|+++++.|++++|||||+|+||+++|++........+....+.+..|++ ++.+|+ |+|+.++|
T Consensus       153 ~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~-evA~~v~~  231 (256)
T PRK07889        153 PAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPT-PVARAVVA  231 (256)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHH-HHHHHHHH
Confidence            7788899999999999999999999999999999999999998654322233334455667887 578887 99999999


Q ss_pred             HccCCCCcccccEEEEcCCcccc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      |+++...+++|+.+.+|||.+..
T Consensus       232 l~s~~~~~~tG~~i~vdgg~~~~  254 (256)
T PRK07889        232 LLSDWFPATTGEIVHVDGGAHAM  254 (256)
T ss_pred             HhCcccccccceEEEEcCceecc
Confidence            99998899999999999997653

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-43  Score=295.75  Aligned_cols=243  Identities=26%  Similarity=0.323  Sum_probs=207.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      ++|||||++|||+++|++|+++|++|++++ +.+.+++..+++.+.    .++.++.+|+++.+  +++++++++.+.++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~Dv~d~~--~~~~~~~~~~~~~g   75 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY----GEVYAVKADLSDKD--DLKNLVKEAWELLG   75 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc----CCceEEEcCCCCHH--HHHHHHHHHHHhcC
Confidence            699999999999999999999999999999 666666666666532    36788999999998  99999999999999


Q ss_pred             CCCEEEEcCCCCCC-CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHH
Q 024517           86 NLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA  164 (266)
Q Consensus        86 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~  164 (266)
                      ++|++|||||.... ..++.+.+.++|.+.+++|+.+++.+++.++|.|.+....|+||++||..+..+  .+....|++
T Consensus        76 ~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~--~~~~~~y~~  153 (259)
T PRK08340         76 GIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEP--MPPLVLADV  153 (259)
T ss_pred             CCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCC--CCCchHHHH
Confidence            99999999997422 235667888999999999999999999999999864333689999999988765  578899999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----------cHHHHHHHhhccCCCCCCCChhhHHHHHH
Q 024517          165 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----------QERAVKLVREAAPLHRWLDVKNDLASTVI  234 (266)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (266)
                      +|+++++|+|+++.|++++|||||+|+||+++|++......          ++...+......|++|+++|+ |+|+++.
T Consensus       154 sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dva~~~~  232 (259)
T PRK08340        154 TRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWE-ELGSLIA  232 (259)
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHH-HHHHHHH
Confidence            99999999999999999999999999999999998643210          111223445677999999998 9999999


Q ss_pred             HHccCCCCcccccEEEEcCCcccc
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      ||+++.++++||+++.+|||..+.
T Consensus       233 fL~s~~~~~itG~~i~vdgg~~~~  256 (259)
T PRK08340        233 FLLSENAEYMLGSTIVFDGAMTRG  256 (259)
T ss_pred             HHcCcccccccCceEeecCCcCCC
Confidence            999999999999999999997654

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=1.8e-43  Score=297.85  Aligned_cols=250  Identities=20%  Similarity=0.342  Sum_probs=214.3

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|+++||||++|||++++++|+++|++|++++ +.+..++..+++...   +.++.++.+|+++.+  ++.+++++
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~v~~~~~~   80 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA---GGEALAVKADVLDKE--SLEQARQQ   80 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEECCCCCHH--HHHHHHHH
Confidence            457899999999999999999999999999999999 556666666666532   357889999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCC--------------CCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEE
Q 024517           80 ACQILGNLDAFVHCYTYEGKM--------------QDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFL  145 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~--------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~i  145 (266)
                      +.+.++++|++|||||...+.              .++.+.+.++|+..+++|+.+++.+++.++|+|.+.+ .|+||++
T Consensus        81 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~i  159 (278)
T PRK08277         81 ILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINI  159 (278)
T ss_pred             HHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence            999999999999999963221              2456788999999999999999999999999998766 6999999


Q ss_pred             ecccccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-----cHHHHHHHhhccCCC
Q 024517          146 TSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-----QERAVKLVREAAPLH  220 (266)
Q Consensus       146 ss~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~  220 (266)
                      ||..+..+  .++...|+++|+|++.|+++++.|+.++|||||+|+||+|.|++......     ..+..+......|++
T Consensus       160 sS~~~~~~--~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~  237 (278)
T PRK08277        160 SSMNAFTP--LTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMG  237 (278)
T ss_pred             ccchhcCC--CCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCcc
Confidence            99988776  57889999999999999999999999999999999999999997643221     122334445678999


Q ss_pred             CCCCChhhHHHHHHHHccC-CCCcccccEEEEcCCccccC
Q 024517          221 RWLDVKNDLASTVIYLISD-GSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       221 ~~~~~~~dva~~~~~l~s~-~~~~~~G~~i~~dgG~~~~~  259 (266)
                      |+++|+ |+|++++||+++ .+.++||+.+.+|||++...
T Consensus       238 r~~~~~-dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~~~  276 (278)
T PRK08277        238 RFGKPE-ELLGTLLWLADEKASSFVTGVVLPVDGGFSAYS  276 (278)
T ss_pred             CCCCHH-HHHHHHHHHcCccccCCcCCCEEEECCCeeccc
Confidence            999998 999999999998 89999999999999987543

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-43  Score=295.20  Aligned_cols=244  Identities=26%  Similarity=0.349  Sum_probs=207.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++      +.++.++.+|+++.+  +++++++++.
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~~~~--~~~~~~~~~~   75 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL------GERARFIATDITDDA--AIERAVATVV   75 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCeeEEEEecCCCHH--HHHHHHHHHH
Confidence            7899999999999999999999999999999999 555555555443      247889999999998  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.++++|++|||||.... .. .+.+.++|++.+++|+.+++.+++.++|.|. ++ +|+||++||..+..+  .++...
T Consensus        76 ~~~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~-~g~ii~isS~~~~~~--~~~~~~  149 (261)
T PRK08265         76 ARFGRVDILVNLACTYLD-DG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RG-GGAIVNFTSISAKFA--QTGRWL  149 (261)
T ss_pred             HHhCCCCEEEECCCCCCC-Cc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cC-CcEEEEECchhhccC--CCCCch
Confidence            999999999999997432 23 3568899999999999999999999999997 33 689999999988776  578889


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc-HHHHHHH-hhccCCCCCCCChhhHHHHHHHHccC
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ-ERAVKLV-REAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      |+++|++++.++++++.|+.++|||+|+|+||+++|++....... ....... ....|++++++|+ |+|+.+.||+++
T Consensus       150 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dva~~~~~l~s~  228 (261)
T PRK08265        150 YPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPE-EVAQVVAFLCSD  228 (261)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHH-HHHHHHHHHcCc
Confidence            999999999999999999999999999999999999986543221 1111122 2356888988887 999999999998


Q ss_pred             CCCcccccEEEEcCCccccCCC
Q 024517          240 GSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      ...+++|+.+.+|||.++..|+
T Consensus       229 ~~~~~tG~~i~vdgg~~~~~~~  250 (261)
T PRK08265        229 AASFVTGADYAVDGGYSALGPE  250 (261)
T ss_pred             cccCccCcEEEECCCeeccCCC
Confidence            8899999999999999877664

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=1.8e-43  Score=299.84  Aligned_cols=244  Identities=21%  Similarity=0.274  Sum_probs=207.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecc---cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE---RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      +++|++|||||++|||+++|++|+++|++|+++++.   +..+++.+.+...   +.++.++.+|+++.+  ++.+++++
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~~~~~~~~  121 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC---GRKAVLLPGDLSDEK--FARSLVHE  121 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc---CCeEEEEEccCCCHH--HHHHHHHH
Confidence            578999999999999999999999999999988732   2334444444322   357888999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||......++.+.+.++|++++++|+.+++.+++++.|+|.+   +++||++||..+..+  .+..
T Consensus       122 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~iv~iSS~~~~~~--~~~~  196 (294)
T PRK07985        122 AHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK---GASIITTSSIQAYQP--SPHL  196 (294)
T ss_pred             HHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc---CCEEEEECCchhccC--CCCc
Confidence            99999999999999997444466778899999999999999999999999999964   489999999988766  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      .+|+++|+|++.|+++++.|++++|||||+|+||+|+|++.......++....+....|++++++|+ |+|++++||+++
T Consensus       197 ~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pe-dva~~~~fL~s~  275 (294)
T PRK07985        197 LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPA-ELAPVYVYLASQ  275 (294)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHH-HHHHHHHhhhCh
Confidence            8999999999999999999999999999999999999998532211233334455678889999998 999999999999


Q ss_pred             CCCcccccEEEEcCCccc
Q 024517          240 GSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~  257 (266)
                      .+.+++|+.+.+|||..+
T Consensus       276 ~~~~itG~~i~vdgG~~~  293 (294)
T PRK07985        276 ESSYVTAEVHGVCGGEHL  293 (294)
T ss_pred             hcCCccccEEeeCCCeeC
Confidence            999999999999999754

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-43  Score=293.21  Aligned_cols=247  Identities=25%  Similarity=0.364  Sum_probs=216.6

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |.+++|+++||||+++||++++++|+++|++|++++ +.++.++..+.+...   +.++.++.+|+++.+  ++++++++
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~i~~~~~~   77 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA---GGEALFVACDVTRDA--EVKALVEQ   77 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEEcCCCCHH--HHHHHHHH
Confidence            467899999999999999999999999999999999 666666666666543   357899999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||+|......++.+.+.++|++++++|+.+++.++++++|+|.+++ .++++++||..+..+  .+++
T Consensus        78 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~~~~--~~~~  154 (253)
T PRK06172         78 TIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAGLGA--APKM  154 (253)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhccC--CCCC
Confidence            9999999999999999854445577889999999999999999999999999998765 689999999988776  6889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-cHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-QERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ..|+++|++++.|+++++.++.++||+|++|+||+++|+++..... .+.....+....|..+..+|+ |+++.+.||++
T Consensus       155 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~ia~~~~~l~~  233 (253)
T PRK06172        155 SIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVE-EVASAVLYLCS  233 (253)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHH-HHHHHHHHHhC
Confidence            9999999999999999999999999999999999999999876432 344445566677888888887 99999999999


Q ss_pred             CCCCcccccEEEEcCCcc
Q 024517          239 DGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~  256 (266)
                      +...+++|+.|.+|||.+
T Consensus       234 ~~~~~~~G~~i~~dgg~~  251 (253)
T PRK06172        234 DGASFTTGHALMVDGGAT  251 (253)
T ss_pred             ccccCcCCcEEEECCCcc
Confidence            988999999999999974

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-43  Score=293.63  Aligned_cols=248  Identities=25%  Similarity=0.427  Sum_probs=217.3

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||+++||+++|++|+++|++|++++ +.++.++..+.+...   +.++.++.+|+++.+  ++++++++
T Consensus         6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~---~~~~~~~~~D~~~~~--~~~~~~~~   80 (255)
T PRK07523          6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ---GLSAHALAFDVTDHD--AVRAAIDA   80 (255)
T ss_pred             cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CceEEEEEccCCCHH--HHHHHHHH
Confidence            346799999999999999999999999999999998 556666666666533   356889999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||+|.. ...++.+.+.++|++++++|+.+++.+++.+.++|.+++ .|+||++||..+..+  .+++
T Consensus        81 ~~~~~~~~d~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~--~~~~  156 (255)
T PRK07523         81 FEAEIGPIDILVNNAGMQ-FRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-AGKIINIASVQSALA--RPGI  156 (255)
T ss_pred             HHHhcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEEccchhccC--CCCC
Confidence            999999999999999984 456777889999999999999999999999999998765 689999999887666  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.++++++.+++++||+||+|.||+++|++.......+....++....|.+++++|+ |+|+++.+|+++
T Consensus       157 ~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~  235 (255)
T PRK07523        157 APYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVE-ELVGACVFLASD  235 (255)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCc
Confidence            9999999999999999999999999999999999999998765433344555666778889999887 999999999998


Q ss_pred             CCCcccccEEEEcCCcccc
Q 024517          240 GSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~  258 (266)
                      ...+++|+.+.+|||.+.+
T Consensus       236 ~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        236 ASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             hhcCccCcEEEECCCeecc
Confidence            8899999999999998654

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-43  Score=296.11  Aligned_cols=246  Identities=26%  Similarity=0.318  Sum_probs=206.7

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |.+++|++|||||++|||+++|++|+++|++|++++ +.+.+++..+++      +.++.++.+|+++.+  ++++++++
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~--~~~~~~~~   73 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF------GDHVLVVEGDVTSYA--DNQRAVDQ   73 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCcceEEEccCCCHH--HHHHHHHH
Confidence            457899999999999999999999999999999998 545444444333      246788999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHH----HHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDE----FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL  155 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~  155 (266)
                      +.+.++++|++|||||+.....++.+.+.++    |++++++|+.+++.+++.++|.|.++  +|+||+++|..+..+  
T Consensus        74 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~--  149 (263)
T PRK06200         74 TVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS--GGSMIFTLSNSSFYP--  149 (263)
T ss_pred             HHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc--CCEEEEECChhhcCC--
Confidence            9999999999999999754344555555554    89999999999999999999998764  489999999988766  


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc---------ccHHHHHHHhhccCCCCCCCCh
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV---------GQERAVKLVREAAPLHRWLDVK  226 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~  226 (266)
                      .++...|+++|++++.|+++++.|+++ +||||+|+||+|+|++.....         ..+..........|++|+++|+
T Consensus       150 ~~~~~~Y~~sK~a~~~~~~~la~el~~-~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~  228 (263)
T PRK06200        150 GGGGPLYTASKHAVVGLVRQLAYELAP-KIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPE  228 (263)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhc-CcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHH
Confidence            477889999999999999999999987 499999999999999864211         0112234456678999999998


Q ss_pred             hhHHHHHHHHccCC-CCcccccEEEEcCCccccCC
Q 024517          227 NDLASTVIYLISDG-SRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       227 ~dva~~~~~l~s~~-~~~~~G~~i~~dgG~~~~~~  260 (266)
                       |+++.+.||+++. +.++||+.+.+|||.++..|
T Consensus       229 -eva~~~~fl~s~~~~~~itG~~i~vdgG~~~~~~  262 (263)
T PRK06200        229 -DHTGPYVLLASRRNSRALTGVVINADGGLGIRGI  262 (263)
T ss_pred             -HHhhhhhheecccccCcccceEEEEcCceeeccc
Confidence             9999999999988 89999999999999877654

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-43  Score=298.04  Aligned_cols=246  Identities=20%  Similarity=0.267  Sum_probs=206.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cc---------cccHHHHHHHhcccCCCCCeEEEEEecCCCchH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE---------RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREG   71 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   71 (266)
                      .+++|++|||||++|||+++|++|+++|++|++++ +.         +.+++..+++...   +.++.++.+|+++.+  
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~Dv~~~~--   77 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA---GGEAVANGDDIADWD--   77 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc---CCceEEEeCCCCCHH--
Confidence            35799999999999999999999999999999988 44         4555666666533   357889999999999  


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCC-----CCeEEEEe
Q 024517           72 AFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA-----GGSIVFLT  146 (266)
Q Consensus        72 ~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-----~g~iv~is  146 (266)
                      ++.++++++.+.+|++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|+|.++..     .|+||++|
T Consensus        78 ~v~~~~~~~~~~~g~id~lv~nAG~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~is  156 (286)
T PRK07791         78 GAANLVDAAVETFGGLDVLVNNAGIL-RDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTS  156 (286)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeC
Confidence            99999999999999999999999984 4467788999999999999999999999999999975421     37999999


Q ss_pred             cccccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCC--CCCC
Q 024517          147 SIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH--RWLD  224 (266)
Q Consensus       147 s~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~  224 (266)
                      |..+..+  .++...|+++|+|+++|+++++.|++++|||||+|+|| +.|++.....      .......+.+  +..+
T Consensus       157 S~~~~~~--~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~------~~~~~~~~~~~~~~~~  227 (286)
T PRK07791        157 SGAGLQG--SVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVF------AEMMAKPEEGEFDAMA  227 (286)
T ss_pred             chhhCcC--CCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhH------HHHHhcCcccccCCCC
Confidence            9988776  58899999999999999999999999999999999999 7898763321      1122223333  3456


Q ss_pred             ChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCCcc
Q 024517          225 VKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRMR  263 (266)
Q Consensus       225 ~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~  263 (266)
                      |+ |+|+.++||+++...+++|+.+.+|||.....+...
T Consensus       228 pe-dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~~~~~  265 (286)
T PRK07791        228 PE-NVSPLVVWLGSAESRDVTGKVFEVEGGKISVAEGWR  265 (286)
T ss_pred             HH-HHHHHHHHHhCchhcCCCCcEEEEcCCceEEechhh
Confidence            76 999999999999889999999999999887665543

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-43  Score=291.50  Aligned_cols=243  Identities=21%  Similarity=0.310  Sum_probs=204.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe--cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG--NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++|++|||||++|||+++|++|+++|++|++++  +.+..++...++...   +.++..+.+|+++.+  ++..+++++
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~~   76 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN---GGSAFSIGANLESLH--GVEALYSSL   76 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc---CCceEEEecccCCHH--HHHHHHHHH
Confidence            4689999999999999999999999999999875  445556666666533   356788999999988  999999887


Q ss_pred             HHH----hC--CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC
Q 024517           81 CQI----LG--NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG  154 (266)
Q Consensus        81 ~~~----~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~  154 (266)
                      .+.    ++  ++|++|||||. ....++.+.+.++|++++++|+.+++.+++.++|.|.+   .|+||++||..+..+ 
T Consensus        77 ~~~~~~~~g~~~id~lv~~Ag~-~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~-  151 (252)
T PRK12747         77 DNELQNRTGSTKFDILINNAGI-GPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRIINISSAATRIS-  151 (252)
T ss_pred             HHHhhhhcCCCCCCEEEECCCc-CCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc---CCeEEEECCcccccC-
Confidence            753    34  89999999997 45566778889999999999999999999999999965   489999999988766 


Q ss_pred             CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHH
Q 024517          155 LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI  234 (266)
Q Consensus       155 ~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (266)
                       .++...|+++|++++.|+++++.|++++|||||+|+||+|+|++.......+..........|.+++.+|+ |+|+.+.
T Consensus       152 -~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~  229 (252)
T PRK12747        152 -LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVE-DIADTAA  229 (252)
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHH-HHHHHHH
Confidence             57889999999999999999999999999999999999999998754332333223333345778888887 9999999


Q ss_pred             HHccCCCCcccccEEEEcCCccc
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      ||+++..++++|+.+.+|||..+
T Consensus       230 ~l~s~~~~~~~G~~i~vdgg~~~  252 (252)
T PRK12747        230 FLASPDSRWVTGQLIDVSGGSCL  252 (252)
T ss_pred             HHcCccccCcCCcEEEecCCccC
Confidence            99998889999999999999653

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=5.2e-43  Score=291.92  Aligned_cols=241  Identities=20%  Similarity=0.256  Sum_probs=207.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++++|++|||||++|||+++|++|+++|++|+++++.+..             ..++.++.||+++++  +++++++++.
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~-------------~~~~~~~~~D~~~~~--~i~~~~~~~~   67 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS-------------YNDVDYFKVDVSNKE--QVIKGIDYVI   67 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc-------------cCceEEEEccCCCHH--HHHHHHHHHH
Confidence            5789999999999999999999999999999998843321             125788999999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      ++++++|++|||||. ....++.+.+.++|++++++|+.+++.+++.++|+|.+++ .|+||++||..+..+  .++...
T Consensus        68 ~~~~~id~li~~Ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~~  143 (258)
T PRK06398         68 SKYGRIDILVNNAGI-ESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINIASVQSFAV--TRNAAA  143 (258)
T ss_pred             HHcCCCCEEEECCCC-CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeCcchhccC--CCCCch
Confidence            999999999999998 4557788889999999999999999999999999998765 699999999988766  578899


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc------cHHH---HHHHhhccCCCCCCCChhhHHHH
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG------QERA---VKLVREAAPLHRWLDVKNDLAST  232 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~~dva~~  232 (266)
                      |+++|++++.|+++++.|+.++ ||||+|+||+++|++......      .+..   ...+....|.+++.+|+ |+|+.
T Consensus       144 Y~~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-eva~~  221 (258)
T PRK06398        144 YVTSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPE-EVAYV  221 (258)
T ss_pred             hhhhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHH-HHHHH
Confidence            9999999999999999999876 999999999999998644211      1111   12234567888888888 99999


Q ss_pred             HHHHccCCCCcccccEEEEcCCccccCCCcc
Q 024517          233 VIYLISDGSRYMTGTTIYVDGAQSITRPRMR  263 (266)
Q Consensus       233 ~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~  263 (266)
                      ++||+++...+++|+++.+|||.+...|...
T Consensus       222 ~~~l~s~~~~~~~G~~i~~dgg~~~~~~~~~  252 (258)
T PRK06398        222 VAFLASDLASFITGECVTVDGGLRALIPLST  252 (258)
T ss_pred             HHHHcCcccCCCCCcEEEECCccccCCCCCC
Confidence            9999999889999999999999887666544

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=8.9e-43  Score=288.74  Aligned_cols=246  Identities=23%  Similarity=0.352  Sum_probs=209.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      |++++|++|||||++|||+++|++|+++|++|+++++.+ .++..+.+.+.   +.++.++.+|+++.+  +++++++++
T Consensus         1 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~-~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~~   74 (248)
T TIGR01832         1 FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE-PSETQQQVEAL---GRRFLSLTADLSDIE--AIKALVDSA   74 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHhc---CCceEEEECCCCCHH--HHHHHHHHH
Confidence            678999999999999999999999999999999998543 34444444432   357889999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||+|.. ...++.+.+.++|+.++++|+.+++.++++++|+|.+++..++||++||..+..+  .+...
T Consensus        75 ~~~~~~~d~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--~~~~~  151 (248)
T TIGR01832        75 VEEFGHIDILVNNAGII-RRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQG--GIRVP  151 (248)
T ss_pred             HHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccC--CCCCc
Confidence            99999999999999984 4456777888999999999999999999999999976543589999999887665  46788


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.++++++.++.++||+||+|+||+++|++..................|.+++.+|+ |+|+++++|+++.
T Consensus       152 ~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~s~~  230 (248)
T TIGR01832       152 SYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPD-DIGGPAVFLASSA  230 (248)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCcc
Confidence            999999999999999999999999999999999999998654332222233345567888999987 9999999999988


Q ss_pred             CCcccccEEEEcCCcc
Q 024517          241 SRYMTGTTIYVDGAQS  256 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~  256 (266)
                      ..+++|+++.+|||..
T Consensus       231 ~~~~~G~~i~~dgg~~  246 (248)
T TIGR01832       231 SDYVNGYTLAVDGGWL  246 (248)
T ss_pred             ccCcCCcEEEeCCCEe
Confidence            8999999999999964

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=6e-43  Score=297.67  Aligned_cols=244  Identities=23%  Similarity=0.311  Sum_probs=209.5

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-ccc--ccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NER--RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      +++|++|||||++|||++++++|+++|++|++++ +.+  ..++..+.+...   +.++.++.+|+++.+  ++++++++
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~v~~~~~~  127 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE---GRKAVALPGDLKDEA--FCRQLVER  127 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc---CCeEEEEecCCCCHH--HHHHHHHH
Confidence            6789999999999999999999999999999887 322  234444455432   357889999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||......++.+.+.++|+.++++|+.+++++++.++|+|.+   +++||++||..+..+  .+..
T Consensus       128 ~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~~sS~~~~~~--~~~~  202 (300)
T PRK06128        128 AVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP---GASIINTGSIQSYQP--SPTL  202 (300)
T ss_pred             HHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc---CCEEEEECCccccCC--CCCc
Confidence            99999999999999997545567788899999999999999999999999999864   579999999988766  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|+++++.++.++|||||+|.||+++|++.......++....+....|.+|+++|+ |++..+++|+++
T Consensus       203 ~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dva~~~~~l~s~  281 (300)
T PRK06128        203 LDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPV-EMAPLYVLLASQ  281 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHH-HHHHHHHHHhCc
Confidence            8999999999999999999999999999999999999998643222233344455678999999988 999999999998


Q ss_pred             CCCcccccEEEEcCCccc
Q 024517          240 GSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~  257 (266)
                      ...+++|+.+.+|||..+
T Consensus       282 ~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        282 ESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             cccCccCcEEeeCCCEeC
Confidence            889999999999999765

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=4.7e-43  Score=292.84  Aligned_cols=244  Identities=20%  Similarity=0.311  Sum_probs=201.2

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|+++||||++|||+++|++|+++|++|++++ +.+.++++.+    ..  +.++.++.+|+++.+  ++++++++
T Consensus         1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~----~~--~~~~~~~~~D~~~~~--~~~~~~~~   72 (262)
T TIGR03325         1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEA----AH--GDAVVGVEGDVRSLD--DHKEAVAR   72 (262)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----hc--CCceEEEEeccCCHH--HHHHHHHH
Confidence            889999999999999999999999999999999998 4444443322    11  246889999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCH----HHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGE----DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL  155 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~  155 (266)
                      +.+.++++|++|||||......++.+.+.    ++|++.+++|+.+++.++++++|.|.+.  +|++|+++|..+..+  
T Consensus        73 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~~sS~~~~~~--  148 (262)
T TIGR03325        73 CVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS--RGSVIFTISNAGFYP--  148 (262)
T ss_pred             HHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc--CCCEEEEeccceecC--
Confidence            99999999999999997433334433332    5799999999999999999999999764  378999999888766  


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc---ccH-----HHHHHHhhccCCCCCCCChh
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV---GQE-----RAVKLVREAAPLHRWLDVKN  227 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~~~  227 (266)
                      .+....|+++|+|++.|+++++.|++++ ||||+|+||+++|++.....   .++     ...+......|++|+++|+ 
T Consensus       149 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-  226 (262)
T TIGR03325       149 NGGGPLYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAE-  226 (262)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChH-
Confidence            4677899999999999999999999986 99999999999999864321   110     1123344568999999998 


Q ss_pred             hHHHHHHHHccCC-CCcccccEEEEcCCcccc
Q 024517          228 DLASTVIYLISDG-SRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       228 dva~~~~~l~s~~-~~~~~G~~i~~dgG~~~~  258 (266)
                      |+|+.+.||+++. ..++||++|.+|||..+.
T Consensus       227 eva~~~~~l~s~~~~~~~tG~~i~vdgg~~~~  258 (262)
T TIGR03325       227 EYTGAYVFFATRGDTVPATGAVLNYDGGMGVR  258 (262)
T ss_pred             HhhhheeeeecCCCcccccceEEEecCCeeec
Confidence            9999999999974 578999999999997654

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.2e-43  Score=295.86  Aligned_cols=253  Identities=20%  Similarity=0.247  Sum_probs=197.1

Q ss_pred             CCCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcc-------cCCCC-----CeEEEEEecCC
Q 024517            2 ENQAKRVLLTSDG--DEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGS-------LKGGQ-----PVEVVGLDMEE   67 (266)
Q Consensus         2 ~l~~k~vlItGa~--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-------~~~~~-----~~~~~~~D~~~   67 (266)
                      +++||++||||++  +|||+++|+.|+++|++|++.++.+.+....+.....       ...+.     ++..+.+|+++
T Consensus         5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~   84 (299)
T PRK06300          5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDT   84 (299)
T ss_pred             CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCC
Confidence            4689999999996  9999999999999999999976322121111111000       00001     11122334443


Q ss_pred             Cc----------------hHHHHHHHHHHHHHhCCCCEEEEcCCCCC-CCCCCCCCCHHHHHHHHHccchHHHHHHHHHH
Q 024517           68 DR----------------EGAFDEAVDKACQILGNLDAFVHCYTYEG-KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVG  130 (266)
Q Consensus        68 ~~----------------~~~v~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  130 (266)
                      .+                +.+++++++++.++||++|++|||||... ...++.+.+.++|++++++|+.++++++|+++
T Consensus        85 ~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~  164 (299)
T PRK06300         85 PEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFG  164 (299)
T ss_pred             CEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            32                12689999999999999999999998632 24678889999999999999999999999999


Q ss_pred             HHHhccCCCCeEEEEecccccccCCCCCch-hhHHhHHHHHHHHHHHHHHhCC-CCcEEEEEecCcccCCCcccccccHH
Q 024517          131 RRMKESKAGGSIVFLTSIIGAERGLYPGAA-AYGACAASIHQLVRTAAMEIGK-HKIRVNGIARGLHLQDEYPIAVGQER  208 (266)
Q Consensus       131 ~~~~~~~~~g~iv~iss~~~~~~~~~~~~~-~y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~pG~v~t~~~~~~~~~~~  208 (266)
                      |+|.+   +|+|++++|..+..+  .+++. .|+++|+|+++|+++++.|+++ +|||||+|+||+++|++.......++
T Consensus       165 p~m~~---~G~ii~iss~~~~~~--~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~  239 (299)
T PRK06300        165 PIMNP---GGSTISLTYLASMRA--VPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIER  239 (299)
T ss_pred             HHhhc---CCeEEEEeehhhcCc--CCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHH
Confidence            99975   479999999888766  46654 8999999999999999999987 49999999999999998643221233


Q ss_pred             HHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCC
Q 024517          209 AVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                      .........|+++..+|+ |+++.++||+|+...++||+.+.+|||.++...
T Consensus       240 ~~~~~~~~~p~~r~~~pe-evA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~  290 (299)
T PRK06300        240 MVDYYQDWAPLPEPMEAE-QVGAAAAFLVSPLASAITGETLYVDHGANVMGI  290 (299)
T ss_pred             HHHHHHhcCCCCCCcCHH-HHHHHHHHHhCccccCCCCCEEEECCCcceecC
Confidence            344445667888988887 999999999999889999999999999887653

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=2.4e-42  Score=287.53  Aligned_cols=244  Identities=25%  Similarity=0.332  Sum_probs=210.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +|++|||||++|||++++++|+++|++|++++ +.++.++...++...   +.++.++.+|+++++  +++++++++.+.
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~~~~~~~~~~~~   76 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD---GGKAIAVKADVSDRD--QVFAAVRQVVDT   76 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEECCCCCHH--HHHHHHHHHHHH
Confidence            68999999999999999999999999999999 656666666666533   357889999999999  999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhH
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG  163 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~  163 (266)
                      ++++|++|||+|. ....++.+.+.++|+.++++|+.+++.+++.+++.|.+.+.+++|+++||..+..+  .++...|+
T Consensus        77 ~~~id~vi~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~  153 (256)
T PRK08643         77 FGDLNVVVNNAGV-APTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVG--NPELAVYS  153 (256)
T ss_pred             cCCCCEEEECCCC-CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccC--CCCCchhH
Confidence            9999999999998 45567778889999999999999999999999999977543589999999988766  57788999


Q ss_pred             HhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--------cHHH-HHHHhhccCCCCCCCChhhHHHHHH
Q 024517          164 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--------QERA-VKLVREAAPLHRWLDVKNDLASTVI  234 (266)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~dva~~~~  234 (266)
                      ++|++++.|++.++.|+.++||+||+|+||+++|+++.....        ++.+ ...+....|.+++.+++ |+++.+.
T Consensus       154 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~  232 (256)
T PRK08643        154 STKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPE-DVANCVS  232 (256)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHH-HHHHHHH
Confidence            999999999999999999999999999999999998754221        1111 23345567888888887 9999999


Q ss_pred             HHccCCCCcccccEEEEcCCccc
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      ||+++..++++|+.|.+|||.++
T Consensus       233 ~L~~~~~~~~~G~~i~vdgg~~~  255 (256)
T PRK08643        233 FLAGPDSDYITGQTIIVDGGMVF  255 (256)
T ss_pred             HHhCccccCccCcEEEeCCCeec
Confidence            99999999999999999999875

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.2e-42  Score=287.64  Aligned_cols=242  Identities=26%  Similarity=0.338  Sum_probs=205.1

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |.+++|+++||||++|||+++|++|+++|++|++++ +.+   +..+++..     .++.++.+|+++++  ++++++++
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~---~~~~~l~~-----~~~~~~~~Dl~~~~--~~~~~~~~   72 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAE---NEAKELRE-----KGVFTIKCDVGNRD--QVKKSKEV   72 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcH---HHHHHHHh-----CCCeEEEecCCCHH--HHHHHHHH
Confidence            556899999999999999999999999999999887 432   22333332     24678999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||+|.. ...++.+.+.++|+.++++|+.+++.+++.++|.|.+++ .++||++||..+..+. .++.
T Consensus        73 ~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~-~~~~  149 (255)
T PRK06463         73 VEKEFGRVDVLVNNAGIM-YLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIGTA-AEGT  149 (255)
T ss_pred             HHHHcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCCCC-CCCc
Confidence            999999999999999984 446777889999999999999999999999999998665 6899999998876432 4677


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc---HHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ---ERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      ..|+++|+|+++|+++++.|+.+.||+||.|+||+|+|++.......   ......+....|.+++.+|+ |+++.+++|
T Consensus       150 ~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l  228 (255)
T PRK06463        150 TFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPE-DIANIVLFL  228 (255)
T ss_pred             cHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHH-HHHHHHHHH
Confidence            88999999999999999999999999999999999999987432211   22334455677888888887 999999999


Q ss_pred             ccCCCCcccccEEEEcCCcc
Q 024517          237 ISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~~  256 (266)
                      +++...+++|+.+.+|||..
T Consensus       229 ~s~~~~~~~G~~~~~dgg~~  248 (255)
T PRK06463        229 ASDDARYITGQVIVADGGRI  248 (255)
T ss_pred             cChhhcCCCCCEEEECCCee
Confidence            99888999999999999953

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=2.8e-42  Score=287.29  Aligned_cols=250  Identities=20%  Similarity=0.269  Sum_probs=219.2

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      +++++|+++||||++|||++++++|+++|++|++++ +.+..++..+++....+ +.++.++.+|+++.+  ++++++++
T Consensus         5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~--~~~~~~~~   81 (257)
T PRK09242          5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFP-EREVHGLAADVSDDE--DRRAILDW   81 (257)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCC-CCeEEEEECCCCCHH--HHHHHHHH
Confidence            457899999999999999999999999999999999 66666666666654433 357889999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||+|. ....++.+.+.++|++.+++|+.+++.++++++|+|.+++ .++||++||..+..+  .+..
T Consensus        82 ~~~~~g~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~--~~~~  157 (257)
T PRK09242         82 VEDHWDGLHILVNNAGG-NIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSGLTH--VRSG  157 (257)
T ss_pred             HHHHcCCCCEEEECCCC-CCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECccccCCC--CCCC
Confidence            99999999999999998 3456677889999999999999999999999999998766 689999999988766  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.++++++.|+.++||++|+|+||+++|++.......+...+......|.+++.+|+ |+++.+.+|+++
T Consensus       158 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~~~  236 (257)
T PRK09242        158 APYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPE-EVAAAVAFLCMP  236 (257)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCc
Confidence            8999999999999999999999999999999999999999876554555555566778888888987 999999999998


Q ss_pred             CCCcccccEEEEcCCcccc
Q 024517          240 GSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~  258 (266)
                      ...+++|+.+.+|||...+
T Consensus       237 ~~~~~~g~~i~~~gg~~~~  255 (257)
T PRK09242        237 AASYITGQCIAVDGGFLRY  255 (257)
T ss_pred             ccccccCCEEEECCCeEee
Confidence            8889999999999997654

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=6e-42  Score=285.96  Aligned_cols=248  Identities=19%  Similarity=0.300  Sum_probs=213.0

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-c-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-E-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++++|++|||||++|||+++|++|+++|++|+++.+ . +..++..+++...   +.++.++.+|+++.+  ++++++++
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~--~i~~~~~~   78 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA---GGEAIAVKGDVTVES--DVVNLIQT   78 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc---CCeEEEEEecCCCHH--HHHHHHHH
Confidence            468999999999999999999999999999998773 3 3445555555433   357889999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.++|+|.+....|+||++||..+..+  .++.
T Consensus        79 ~~~~~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~--~~~~  155 (261)
T PRK08936         79 AVKEFGTLDVMINNAGIE-NAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIP--WPLF  155 (261)
T ss_pred             HHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCC--CCCC
Confidence            999999999999999973 4466778899999999999999999999999999987654589999999887665  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|+|++.|+++++.++.+.||+||+|+||+++|++.......++.........|.+++.+++ |+++.+.||+++
T Consensus       156 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~s~  234 (261)
T PRK08936        156 VHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPE-EIAAVAAWLASS  234 (261)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCc
Confidence            9999999999999999999999999999999999999998654333333344455677888888888 999999999999


Q ss_pred             CCCcccccEEEEcCCcccc
Q 024517          240 GSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~  258 (266)
                      .+.+++|+.+.+|||..+.
T Consensus       235 ~~~~~~G~~i~~d~g~~~~  253 (261)
T PRK08936        235 EASYVTGITLFADGGMTLY  253 (261)
T ss_pred             ccCCccCcEEEECCCcccC
Confidence            9999999999999997754

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=8.6e-42  Score=284.29  Aligned_cols=250  Identities=27%  Similarity=0.383  Sum_probs=214.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .+|++|||||++|||++++++|+++|++|+++. +. +..++..+++...   +.++.++.+|+++.+  +++++++++.
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~~~~~~~~~~   75 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH---GVRAEIRQLDLSDLP--EGAQALDKLI   75 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc---CCceEEEEccCCCHH--HHHHHHHHHH
Confidence            368999999999999999999999999999886 33 4455555555433   457899999999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.++++|++|||+|.. ...++.+.+.++|++++++|+.+++.+++++.++|.+++.+|+||++||..+..+  .++...
T Consensus        76 ~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~--~~~~~~  152 (256)
T PRK12743         76 QRLGRIDVLVNNAGAM-TKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTP--LPGASA  152 (256)
T ss_pred             HHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCC--CCCcch
Confidence            9999999999999984 4456777889999999999999999999999999976543589999999987766  578899


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCC
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS  241 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  241 (266)
                      |+++|++++.++++++.++.++|||+|+|+||+++|++....  ..+.........|.++..+|+ |+++.+.+|+++..
T Consensus       153 Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~  229 (256)
T PRK12743        153 YTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD--DSDVKPDSRPGIPLGRPGDTH-EIASLVAWLCSEGA  229 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc--ChHHHHHHHhcCCCCCCCCHH-HHHHHHHHHhCccc
Confidence            999999999999999999999999999999999999986542  222333344567888888887 99999999999888


Q ss_pred             CcccccEEEEcCCccccCCCccC
Q 024517          242 RYMTGTTIYVDGAQSITRPRMRS  264 (266)
Q Consensus       242 ~~~~G~~i~~dgG~~~~~~~~~~  264 (266)
                      .+++|+.+.+|||..++.|.++.
T Consensus       230 ~~~~G~~~~~dgg~~~~~~~~~~  252 (256)
T PRK12743        230 SYTTGQSLIVDGGFMLANPQFNS  252 (256)
T ss_pred             cCcCCcEEEECCCccccCCcccc
Confidence            99999999999999999888874

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-42  Score=286.02  Aligned_cols=246  Identities=24%  Similarity=0.273  Sum_probs=208.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||++++++|+++|++|++++ +.++.++..+++....  +.++.++.+|+++.+  ++++++++
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~--~~~~~~~~   78 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH--GVDVAVHALDLSSPE--AREQLAAE   78 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc--CCceEEEEecCCCHH--HHHHHHHH
Confidence            557899999999999999999999999999999999 6666666666665432  247889999999988  88887754


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                          ++++|++|||+|.. ...++.+.+.++|+.++++|+.+++.++++++|.|.+++ .|+||++||..+..+  .+.+
T Consensus        79 ----~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~~~~~--~~~~  150 (259)
T PRK06125         79 ----AGDIDILVNNAGAI-PGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAAGENP--DADY  150 (259)
T ss_pred             ----hCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCccccCC--CCCc
Confidence                58999999999984 556788899999999999999999999999999998765 589999999988665  5778


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc--------ccHHHHHHHhhccCCCCCCCChhhHHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV--------GQERAVKLVREAAPLHRWLDVKNDLAS  231 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~dva~  231 (266)
                      ..|+++|++++.|+++++.|+.++|||||+|+||+++|++.....        .+++....+....|.+++.+|+ |+|+
T Consensus       151 ~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~  229 (259)
T PRK06125        151 ICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPE-EVAD  229 (259)
T ss_pred             hHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHH-HHHH
Confidence            899999999999999999999999999999999999999754321        1223334445667888888887 9999


Q ss_pred             HHHHHccCCCCcccccEEEEcCCccccC
Q 024517          232 TVIYLISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       232 ~~~~l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      .++||+++.+.++||+.+.+|||..+..
T Consensus       230 ~~~~l~~~~~~~~~G~~i~vdgg~~~~~  257 (259)
T PRK06125        230 LVAFLASPRSGYTSGTVVTVDGGISARG  257 (259)
T ss_pred             HHHHHcCchhccccCceEEecCCeeecC
Confidence            9999999889999999999999987653

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-42  Score=285.05  Aligned_cols=242  Identities=26%  Similarity=0.412  Sum_probs=208.7

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      |++++|++|||||++|||++++++|+++|++|+++++....     ..  .   +.++.++.+|+++.+  +++++++++
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~~--~---~~~~~~~~~D~~~~~--~~~~~~~~~   69 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----TV--D---GRPAEFHAADVRDPD--QVAALVDAI   69 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----hh--c---CCceEEEEccCCCHH--HHHHHHHHH
Confidence            78899999999999999999999999999999999843221     11  1   257889999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.+.|+|.++...|+||++||..+..+  .+...
T Consensus        70 ~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~--~~~~~  146 (252)
T PRK07856         70 VERHGRLDVLVNNAGGS-PYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRP--SPGTA  146 (252)
T ss_pred             HHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCC--CCCCc
Confidence            99999999999999973 5566777889999999999999999999999999987543589999999988766  57889


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.|++.++.|+.+. |++|+|+||+++|++.......++.........|.+++.+|+ |+++.+++|+++.
T Consensus       147 ~Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~va~~~~~L~~~~  224 (252)
T PRK07856        147 AYGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPA-DIAWACLFLASDL  224 (252)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHH-HHHHHHHHHcCcc
Confidence            99999999999999999999987 999999999999998654333333344455677888989988 9999999999988


Q ss_pred             CCcccccEEEEcCCccccC
Q 024517          241 SRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~~~  259 (266)
                      ..+++|+.|.+|||..++.
T Consensus       225 ~~~i~G~~i~vdgg~~~~~  243 (252)
T PRK07856        225 ASYVSGANLEVHGGGERPA  243 (252)
T ss_pred             cCCccCCEEEECCCcchHH
Confidence            8999999999999976653

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.2e-42  Score=284.09  Aligned_cols=244  Identities=24%  Similarity=0.386  Sum_probs=210.0

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      |++.+|++|||||+++||.++|++|+++|++|+++++.....+..+.+.     +.++.++.+|+++.+  +++++++++
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~--~~~~~~~~~   83 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLL-----GGNAKGLVCDVSDSQ--SVEAAVAAV   83 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhh-----CCceEEEEecCCCHH--HHHHHHHHH
Confidence            4678999999999999999999999999999999985544444443332     246779999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||+|.. ...++.+.+.++|+.++++|+.+++.+++.+.|+|.+++ .++||++||..+..+  .+...
T Consensus        84 ~~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~--~~~~~  159 (255)
T PRK06841         84 ISAFGRIDILVNSAGVA-LLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNLASQAGVVA--LERHV  159 (255)
T ss_pred             HHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEEcchhhccC--CCCCc
Confidence            99999999999999984 456677788999999999999999999999999998766 689999999988766  58889


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.++++++.+++++||++|.|+||+++|++....... ..........|.+++.+|+ |+++.+++|+++.
T Consensus       160 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~va~~~~~l~~~~  237 (255)
T PRK06841        160 AYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAG-EKGERAKKLIPAGRFAYPE-EIAAAALFLASDA  237 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccch-hHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCcc
Confidence            9999999999999999999999999999999999999986543322 2223345567888888887 9999999999999


Q ss_pred             CCcccccEEEEcCCccc
Q 024517          241 SRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~  257 (266)
                      +.+++|+++.+|||+++
T Consensus       238 ~~~~~G~~i~~dgg~~~  254 (255)
T PRK06841        238 AAMITGENLVIDGGYTI  254 (255)
T ss_pred             ccCccCCEEEECCCccC
Confidence            99999999999999764

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.4e-42  Score=284.96  Aligned_cols=245  Identities=24%  Similarity=0.362  Sum_probs=211.7

Q ss_pred             CCCcEEEEecCCC-chHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGD-EISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~-giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++|++|||||++ |||+++++.|+++|++|++++ +.+++++..+++.+..+ ..++.++.+|+++++  +++++++++
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~--~~~~~~~~~   91 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELG-LGRVEAVVCDVTSEA--QVDALIDAA   91 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcC-CceEEEEEccCCCHH--HHHHHHHHH
Confidence            4689999999985 999999999999999999988 66666676666654332 146889999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||+|.. ...++.+.+.++|++++++|+.+++.+++.++|.|.+....|.|++++|..+..+  .++..
T Consensus        92 ~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~--~~~~~  168 (262)
T PRK07831         92 VERLGRLDVLVNNAGLG-GQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRA--QHGQA  168 (262)
T ss_pred             HHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC--CCCCc
Confidence            99999999999999973 4567788899999999999999999999999999986543589999999888766  47888


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|+|+++|+++++.|++++|||||+|+||+++|++..... .++..+.+....|++++++|+ |+|+.++||+++.
T Consensus       169 ~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~-~~~~~~~~~~~~~~~r~~~p~-~va~~~~~l~s~~  246 (262)
T PRK07831        169 HYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVT-SAELLDELAAREAFGRAAEPW-EVANVIAFLASDY  246 (262)
T ss_pred             chHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccccc-CHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCch
Confidence            99999999999999999999999999999999999999875432 334444455677888989887 9999999999998


Q ss_pred             CCcccccEEEEcCCc
Q 024517          241 SRYMTGTTIYVDGAQ  255 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~  255 (266)
                      +.++||+++.+|+++
T Consensus       247 ~~~itG~~i~v~~~~  261 (262)
T PRK07831        247 SSYLTGEVVSVSSQH  261 (262)
T ss_pred             hcCcCCceEEeCCCC
Confidence            999999999999974

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.8e-42  Score=283.94  Aligned_cols=238  Identities=24%  Similarity=0.279  Sum_probs=204.4

Q ss_pred             CCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEEecc------------cccHHHHHHHhcccCCCCCeEEEEEecCCC
Q 024517            3 NQAKRVLLTSDG--DEISKNIAFHLAKRGCRLVLVGNE------------RRLSSVAEKMMGSLKGGQPVEVVGLDMEED   68 (266)
Q Consensus         3 l~~k~vlItGa~--~giG~~ia~~l~~~g~~v~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   68 (266)
                      +++|++|||||+  +|||+++|++|+++|++|+++++.            +...+..+++++.   +.++.++.+|+++.
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~D~~~~   80 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN---GVKVSSMELDLTQN   80 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc---CCeEEEEEcCCCCH
Confidence            689999999999  499999999999999999987411            1122333444322   46788999999999


Q ss_pred             chHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           69 REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                      +  +++++++++.+.++++|++|||||.. ...++.+.+.++|+.++++|+.+++.+.+.++|.|.+++ +|+||++||.
T Consensus        81 ~--~i~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~  156 (256)
T PRK12859         81 D--APKELLNKVTEQLGYPHILVNNAAYS-TNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMTSG  156 (256)
T ss_pred             H--HHHHHHHHHHHHcCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEEccc
Confidence            9  99999999999999999999999984 446788899999999999999999999999999998765 6899999999


Q ss_pred             cccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhh
Q 024517          149 IGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKND  228 (266)
Q Consensus       149 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  228 (266)
                      .+..+  .+++..|+++|++++.|+++++.++.++||+||+|+||+++|++...     .....+....|.++..+|+ |
T Consensus       157 ~~~~~--~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~-----~~~~~~~~~~~~~~~~~~~-d  228 (256)
T PRK12859        157 QFQGP--MVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE-----EIKQGLLPMFPFGRIGEPK-D  228 (256)
T ss_pred             ccCCC--CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH-----HHHHHHHhcCCCCCCcCHH-H
Confidence            88766  58899999999999999999999999999999999999999987532     2333445667888888887 9


Q ss_pred             HHHHHHHHccCCCCcccccEEEEcCCc
Q 024517          229 LASTVIYLISDGSRYMTGTTIYVDGAQ  255 (266)
Q Consensus       229 va~~~~~l~s~~~~~~~G~~i~~dgG~  255 (266)
                      +|+.+.+|+++.+++++|+++.+|||.
T Consensus       229 ~a~~~~~l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        229 AARLIKFLASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             HHHHHHHHhCccccCccCcEEEeCCCc
Confidence            999999999998899999999999994

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=8.9e-42  Score=284.08  Aligned_cols=246  Identities=25%  Similarity=0.399  Sum_probs=216.7

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|+++||||+++||++++++|+++|++|++++ +.+.+++..+++...   +.++.++.+|+++++  ++.+++++
T Consensus         7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~~~~~~~~   81 (256)
T PRK06124          7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA---GGAAEALAFDIADEE--AVAAAFAR   81 (256)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc---CCceEEEEccCCCHH--HHHHHHHH
Confidence            467899999999999999999999999999999999 556666666666543   356889999999988  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+.+.++++|.+.+ .+++|++||..+..+  .++.
T Consensus        82 ~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~--~~~~  157 (256)
T PRK06124         82 IDAEHGRLDILVNNVGAR-DRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIAGQVA--RAGD  157 (256)
T ss_pred             HHHhcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeechhccC--CCCc
Confidence            999999999999999984 446777889999999999999999999999999997766 689999999988776  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.+++.++.|+.++||++|+|+||+++|++.......++....+....|.+++.+++ |+++.+++|+++
T Consensus       158 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~l~~~  236 (256)
T PRK06124        158 AVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPE-EIAGAAVFLASP  236 (256)
T ss_pred             cHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHH-HHHHHHHHHcCc
Confidence            9999999999999999999999999999999999999998655433445555566677888888887 999999999999


Q ss_pred             CCCcccccEEEEcCCcc
Q 024517          240 GSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~  256 (266)
                      .+++++|+.+.+|||..
T Consensus       237 ~~~~~~G~~i~~dgg~~  253 (256)
T PRK06124        237 AASYVNGHVLAVDGGYS  253 (256)
T ss_pred             ccCCcCCCEEEECCCcc
Confidence            89999999999999965

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=1.9e-42  Score=281.90  Aligned_cols=223  Identities=25%  Similarity=0.324  Sum_probs=199.2

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++++++||||||+|||+++|++|+++|++|+++. +.++++++.++++..+  +..+.++++|+++++  ++.++.+++.
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~--~v~v~vi~~DLs~~~--~~~~l~~~l~   79 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT--GVEVEVIPADLSDPE--ALERLEDELK   79 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh--CceEEEEECcCCChh--HHHHHHHHHH
Confidence            5789999999999999999999999999999999 8899999999998775  368999999999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +....||++|||||+ +...++.+.+.++.++++++|+.+++.+++.++|.|.+++ .|.||+|+|.++..+  .|....
T Consensus        80 ~~~~~IdvLVNNAG~-g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~~p--~p~~av  155 (265)
T COG0300          80 ERGGPIDVLVNNAGF-GTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGLIP--TPYMAV  155 (265)
T ss_pred             hcCCcccEEEECCCc-CCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhcCC--CcchHH
Confidence            988899999999999 6778999999999999999999999999999999999987 799999999999988  589999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      |+++|+++.+|+++|+.|+...||+|.+|+||+|.|+++.....      ......|...+.+|+ ++|+.+++.+...
T Consensus       156 Y~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~------~~~~~~~~~~~~~~~-~va~~~~~~l~~~  227 (265)
T COG0300         156 YSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGS------DVYLLSPGELVLSPE-DVAEAALKALEKG  227 (265)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccccccc------ccccccchhhccCHH-HHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999862111      111122333456666 9999999998653

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-42  Score=284.47  Aligned_cols=245  Identities=27%  Similarity=0.388  Sum_probs=210.6

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||+++||+++|++|+++|++|++++ +.+..++..+++      ..++.++.+|+++.+  ++++++++
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~--~~~~~~~~   73 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI------GPAAIAVSLDVTRQD--SIDRIVAA   73 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh------CCceEEEEccCCCHH--HHHHHHHH
Confidence            568899999999999999999999999999999998 555555554443      146888999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||+|.. ...++.+.+.++++..+++|+.+++.+++++.++|.+++.+++||++||..+..+  .++.
T Consensus        74 ~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~  150 (257)
T PRK07067         74 AVERFGGIDILFNNAALF-DMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRG--EALV  150 (257)
T ss_pred             HHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCC--CCCC
Confidence            999999999999999984 4467778889999999999999999999999999977643589999999887766  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc---------ccHHHHHHHhhccCCCCCCCChhhHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV---------GQERAVKLVREAAPLHRWLDVKNDLA  230 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva  230 (266)
                      ..|+++|++++.++++++.|+.++||++|+|.||+++|+++....         ...+......+..|.+++.+|+ |+|
T Consensus       151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva  229 (257)
T PRK07067        151 SHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPD-DLT  229 (257)
T ss_pred             chhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHH-HHH
Confidence            999999999999999999999999999999999999999764321         0122233445677888999998 999


Q ss_pred             HHHHHHccCCCCcccccEEEEcCCccc
Q 024517          231 STVIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +.+.+|+++...+++|+++.+|||..+
T Consensus       230 ~~~~~l~s~~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        230 GMALFLASADADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             HHHHHHhCcccccccCcEEeecCCEeC
Confidence            999999999889999999999999654

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-41  Score=282.16  Aligned_cols=245  Identities=23%  Similarity=0.342  Sum_probs=207.7

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +|++|||||++|||++++++|+++|++|++++ +.+++++..+++...   +.++.++.+|+++++  +++++++++.+.
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~~~~~   75 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF---PGQVLTVQMDVRNPE--DVQKMVEQIDEK   75 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEecCCCHH--HHHHHHHHHHHH
Confidence            68999999999999999999999999999998 555566666655432   257889999999988  999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhH
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG  163 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~  163 (266)
                      ++++|++|||+|.. ...++.+.+.++|++++++|+.+++.++++++|+|.+....|+|+++||..+..+  .+...+|+
T Consensus        76 ~~~id~lI~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~--~~~~~~Y~  152 (252)
T PRK07677         76 FGRIDALINNAAGN-FICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDA--GPGVIHSA  152 (252)
T ss_pred             hCCccEEEECCCCC-CCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccC--CCCCcchH
Confidence            99999999999873 4466778899999999999999999999999999876543589999999988765  47788999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CCcEEEEEecCcccCCCc-ccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCC
Q 024517          164 ACAASIHQLVRTAAMEIGK-HKIRVNGIARGLHLQDEY-PIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS  241 (266)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~-~~i~v~~v~pG~v~t~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  241 (266)
                      ++|++++.|+++++.|+.+ .|||+|+|+||+++|+.. ......++..+......|.+++.+|+ |+++.+.+|+++..
T Consensus       153 ~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~~~~~  231 (252)
T PRK07677        153 AAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPE-EIAGLAYFLLSDEA  231 (252)
T ss_pred             HHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHH-HHHHHHHHHcCccc
Confidence            9999999999999999975 699999999999996433 22222344445555677888889888 99999999999888


Q ss_pred             CcccccEEEEcCCcccc
Q 024517          242 RYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       242 ~~~~G~~i~~dgG~~~~  258 (266)
                      .+++|+.+.+|||.++-
T Consensus       232 ~~~~g~~~~~~gg~~~~  248 (252)
T PRK07677        232 AYINGTCITMDGGQWLN  248 (252)
T ss_pred             cccCCCEEEECCCeecC
Confidence            89999999999997653

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.9e-42  Score=284.00  Aligned_cols=197  Identities=25%  Similarity=0.291  Sum_probs=180.3

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      +++++|+|+|||||+|||.++|.+|+++|++++++. +.++++.+++++.+..+.. ++.+++||++|.+  ++++++++
T Consensus         8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~-~v~~~~~Dvs~~~--~~~~~~~~   84 (282)
T KOG1205|consen    8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLE-KVLVLQLDVSDEE--SVKKFVEW   84 (282)
T ss_pred             HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcC-ccEEEeCccCCHH--HHHHHHHH
Confidence            357899999999999999999999999999999888 8888999989998876643 7999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +..+||++|+||||||... .....+.+.++++.+|++|+.|+++++|+++|+|++++ .|+||+|||++|..+  .|..
T Consensus        85 ~~~~fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~--~P~~  160 (282)
T KOG1205|consen   85 AIRHFGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMP--LPFR  160 (282)
T ss_pred             HHHhcCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccC--CCcc
Confidence            9999999999999999954 66777888999999999999999999999999999987 799999999999988  6787


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCC--cEEEEEecCcccCCCcccccc
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHK--IRVNGIARGLHLQDEYPIAVG  205 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~pG~v~t~~~~~~~~  205 (266)
                      ..|++||+|+.+|.++|+.|+.+.+  |++ .|+||+|+|++......
T Consensus       161 ~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~~  207 (282)
T KOG1205|consen  161 SIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKELL  207 (282)
T ss_pred             cccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchhhc
Confidence            8999999999999999999999876  666 99999999998766543

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-41  Score=283.18  Aligned_cols=244  Identities=22%  Similarity=0.324  Sum_probs=205.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++++|++|||||++|||++++++|+++|++|+++++.+..++..+++...   +.++.++.+|+++.+  ++.++++++.
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~~~   79 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAA---GGEALALTADLETYA--GAQAAMAAAV   79 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhc---CCeEEEEEEeCCCHH--HHHHHHHHHH
Confidence            46799999999999999999999999999999998555455555555432   357889999999998  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.++++|++|||||......++.+.+.++|++.+++|+.+++.+++.++|+|.+++ .++||++||..+. +   +...+
T Consensus        80 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~-~---~~~~~  154 (260)
T PRK12823         80 EAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATR-G---INRVP  154 (260)
T ss_pred             HHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCcccc-C---CCCCc
Confidence            99999999999998643456778889999999999999999999999999998765 5899999998653 2   34568


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc------c-----cHHHHHHHhhccCCCCCCCChhhHH
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV------G-----QERAVKLVREAAPLHRWLDVKNDLA  230 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~------~-----~~~~~~~~~~~~~~~~~~~~~~dva  230 (266)
                      |+++|++++.|+++++.|++++||+||+|+||+|+||+.....      .     .++.........|++++++|+ |++
T Consensus       155 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva  233 (260)
T PRK12823        155 YSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTID-EQV  233 (260)
T ss_pred             cHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHH-HHH
Confidence            9999999999999999999999999999999999998632100      0     112233344567888999987 999


Q ss_pred             HHHHHHccCCCCcccccEEEEcCCcc
Q 024517          231 STVIYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      +++.+|+++...+++|+.+.+|||..
T Consensus       234 ~~~~~l~s~~~~~~~g~~~~v~gg~~  259 (260)
T PRK12823        234 AAILFLASDEASYITGTVLPVGGGDL  259 (260)
T ss_pred             HHHHHHcCcccccccCcEEeecCCCC
Confidence            99999999888999999999999963

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-41  Score=284.26  Aligned_cols=248  Identities=23%  Similarity=0.337  Sum_probs=214.1

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|+++||||+++||++++++|+++|++|++++ +.+++++..+.+...   +.++.++.+|+++.+  ++++++++
T Consensus         6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~~~~~~~~   80 (265)
T PRK07097          6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL---GIEAHGYVCDVTDED--GVQAMVSQ   80 (265)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc---CCceEEEEcCCCCHH--HHHHHHHH
Confidence            467899999999999999999999999999999998 666666666666533   357899999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||+|.. ...++.+.+.++|+.++++|+.+++.+++.++|+|.+.+ .++||++||..+..+  .+.+
T Consensus        81 ~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~  156 (265)
T PRK07097         81 IEKEVGVIDILVNNAGII-KRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSELG--RETV  156 (265)
T ss_pred             HHHhCCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCccccCC--CCCC
Confidence            999999999999999984 445777889999999999999999999999999998765 699999999988766  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc------cHHHHHHHhhccCCCCCCCChhhHHHHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG------QERAVKLVREAAPLHRWLDVKNDLASTV  233 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dva~~~  233 (266)
                      ..|+++|++++.++++++.++.+.||+||+|+||++.|++......      ...+........|..++.+|+ |+|+.+
T Consensus       157 ~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~  235 (265)
T PRK07097        157 SAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPE-DLAGPA  235 (265)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHH-HHHHHH
Confidence            9999999999999999999999999999999999999998654321      122333445567788888887 999999


Q ss_pred             HHHccCCCCcccccEEEEcCCcccc
Q 024517          234 IYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       234 ~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      .+|+++..++++|+.+.+|||....
T Consensus       236 ~~l~~~~~~~~~g~~~~~~gg~~~~  260 (265)
T PRK07097        236 VFLASDASNFVNGHILYVDGGILAY  260 (265)
T ss_pred             HHHhCcccCCCCCCEEEECCCceec
Confidence            9999988899999999999996543

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=2.1e-41  Score=281.81  Aligned_cols=244  Identities=23%  Similarity=0.392  Sum_probs=211.1

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|+++||||++|||++++++|+++|++|++++ +.+..++..+++...   +.++.++.+|+++.+  ++.+++++
T Consensus         7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~--~i~~~~~~   81 (255)
T PRK06113          7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL---GGQAFACRCDITSEQ--ELSALADF   81 (255)
T ss_pred             cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEccCCCHH--HHHHHHHH
Confidence            467899999999999999999999999999999998 666666666666543   357889999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||+|...+ .++ +.+.++|+..+++|+.+++.+++++.|+|.+.+ .++||++||..+..+  .++.
T Consensus        82 ~~~~~~~~d~li~~ag~~~~-~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~--~~~~  156 (255)
T PRK06113         82 ALSKLGKVDILVNNAGGGGP-KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENK--NINM  156 (255)
T ss_pred             HHHHcCCCCEEEECCCCCCC-CCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEecccccCC--CCCc
Confidence            99999999999999997432 333 678899999999999999999999999997665 589999999988766  5778


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|+++++.++.+.|||||+|+||+++|+++.... .+..........|.+++++|+ |+++++++|+++
T Consensus       157 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-d~a~~~~~l~~~  234 (255)
T PRK06113        157 TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQ-DIANAALFLCSP  234 (255)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeccccccccccccc-CHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCc
Confidence            899999999999999999999999999999999999999876543 233444455677888888887 999999999999


Q ss_pred             CCCcccccEEEEcCCcc
Q 024517          240 GSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~  256 (266)
                      .+.+++|+.|.+|||..
T Consensus       235 ~~~~~~G~~i~~~gg~~  251 (255)
T PRK06113        235 AASWVSGQILTVSGGGV  251 (255)
T ss_pred             cccCccCCEEEECCCcc
Confidence            89999999999999943

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-41  Score=284.06  Aligned_cols=248  Identities=26%  Similarity=0.388  Sum_probs=210.4

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++++|+++||||++|||++++++|+++|++|+++++.+...+..+++...   +.++.++.+|+++.+  +++++++++.
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~v~~~~~~~~   77 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGR---GHRCTAVVADVRDPA--SVAAAIKRAK   77 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHh---CCceEEEECCCCCHH--HHHHHHHHHH
Confidence            57899999999999999999999999999999998554444555554332   357889999999998  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.++++|++|||+|.. ...++.+.+.+++++.+++|+.+++.+.+.++|+|.+.+ .++||++||..+.... .+.+..
T Consensus        78 ~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~-~~~~~~  154 (263)
T PRK08226         78 EKEGRIDILVNNAGVC-RLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-DGRIVMMSSVTGDMVA-DPGETA  154 (263)
T ss_pred             HHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhcccC-CCCcch
Confidence            9999999999999984 556777888999999999999999999999999987665 5899999998764322 477889


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc------cHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG------QERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      |+++|++++.++++++.++.++||+||+|+||+++|++......      .+..........|++++.+|+ |+|+.+.|
T Consensus       155 Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~va~~~~~  233 (263)
T PRK08226        155 YALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPL-EVGELAAF  233 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHH-HHHHHHHH
Confidence            99999999999999999999999999999999999998654321      123334455667888888887 99999999


Q ss_pred             HccCCCCcccccEEEEcCCcccc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      |+++.+.+++|+++.+|||.++.
T Consensus       234 l~~~~~~~~~g~~i~~dgg~~~~  256 (263)
T PRK08226        234 LASDESSYLTGTQNVIDGGSTLP  256 (263)
T ss_pred             HcCchhcCCcCceEeECCCcccC
Confidence            99988899999999999997654

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=1e-41  Score=287.35  Aligned_cols=253  Identities=27%  Similarity=0.352  Sum_probs=209.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||++++++|+++|++|++++ +.+..++..+++.    .+.++.++.+|++|.+  +++++++++
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~--~~~~~~~~~   88 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG----GEPNVCFFHCDVTVED--DVSRAVDFT   88 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc----CCCceEEEEeecCCHH--HHHHHHHHH
Confidence            46799999999999999999999999999999998 5444555554442    1357899999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCC-CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           81 CQILGNLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      .+.++++|++|||||.... ..++.+.+.++|+.++++|+.+++.++++++|.|.+.+ .|+|++++|..+..+  .++.
T Consensus        89 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~--~~~~  165 (280)
T PLN02253         89 VDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK-KGSIVSLCSVASAIG--GLGP  165 (280)
T ss_pred             HHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CceEEEecChhhccc--CCCC
Confidence            9999999999999997433 24577888999999999999999999999999997655 689999999988766  4667


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccH----HHH----HHHhhccCC-CCCCCChhhHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE----RAV----KLVREAAPL-HRWLDVKNDLA  230 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~----~~~----~~~~~~~~~-~~~~~~~~dva  230 (266)
                      ..|+++|++++.++++++.|++++||+||+|+||.++|++......++    ...    .......++ ++..+|+ |++
T Consensus       166 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-dva  244 (280)
T PLN02253        166 HAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVD-DVA  244 (280)
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHH-HHH
Confidence            799999999999999999999999999999999999999764322111    111    111222333 3445666 999


Q ss_pred             HHHHHHccCCCCcccccEEEEcCCccccCCCccC
Q 024517          231 STVIYLISDGSRYMTGTTIYVDGAQSITRPRMRS  264 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~~  264 (266)
                      +++.+|+++...+++|+.+.+|||.+..+++++-
T Consensus       245 ~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~~~~~  278 (280)
T PLN02253        245 NAVLFLASDEARYISGLNLMIDGGFTCTNHSLRV  278 (280)
T ss_pred             HHHHhhcCcccccccCcEEEECCchhhccchhee
Confidence            9999999998899999999999999988887763

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-42  Score=286.40  Aligned_cols=239  Identities=25%  Similarity=0.355  Sum_probs=202.1

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||++++++|+++|++|++++ +.+..+            ..++.++.+|+++++  ++++++++
T Consensus         5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~------------~~~~~~~~~D~~~~~--~~~~~~~~   70 (266)
T PRK06171          5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ------------HENYQFVPTDVSSAE--EVNHTVAE   70 (266)
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc------------cCceEEEEccCCCHH--HHHHHHHH
Confidence            578899999999999999999999999999999998 443321            136788999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCC--------CCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccc
Q 024517           80 ACQILGNLDAFVHCYTYEGKM--------QDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGA  151 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~--------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~  151 (266)
                      +.+.++++|++|||||...+.        .++.+.+.++|+.++++|+.+++.+++++.++|.+++ .++||++||..+.
T Consensus        71 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~  149 (266)
T PRK06171         71 IIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQH-DGVIVNMSSEAGL  149 (266)
T ss_pred             HHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcC-CcEEEEEcccccc
Confidence            999999999999999974321        1234578899999999999999999999999998765 6899999999887


Q ss_pred             ccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCccc-CCCcccccc----------cHHHHHHHhh--ccC
Q 024517          152 ERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL-QDEYPIAVG----------QERAVKLVRE--AAP  218 (266)
Q Consensus       152 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~-t~~~~~~~~----------~~~~~~~~~~--~~~  218 (266)
                      .+  .++...|+++|++++.|+++++.|++++|||||.|+||+++ |++......          .++..+.+.+  ..|
T Consensus       150 ~~--~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  227 (266)
T PRK06171        150 EG--SEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIP  227 (266)
T ss_pred             CC--CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhccccccc
Confidence            66  57889999999999999999999999999999999999997 555332110          1222333333  679


Q ss_pred             CCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccc
Q 024517          219 LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       219 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      ++|+++|+ |+|+++.||+|+.++++||+.|.+|||.+.
T Consensus       228 ~~r~~~~~-eva~~~~fl~s~~~~~itG~~i~vdgg~~~  265 (266)
T PRK06171        228 LGRSGKLS-EVADLVCYLLSDRASYITGVTTNIAGGKTR  265 (266)
T ss_pred             CCCCCCHH-HhhhheeeeeccccccceeeEEEecCcccC
Confidence            99999998 999999999999899999999999999753

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-42  Score=290.84  Aligned_cols=241  Identities=16%  Similarity=0.146  Sum_probs=194.7

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecc-----------cccHHHHHHHhcccCCCCCeEEEEEecCCCch
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-----------RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDRE   70 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   70 (266)
                      ++++|++|||||++|||+++|++|+++|++|+++++.           ++.+++.+++...   +.++.++.+|+++++ 
T Consensus         5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~Dv~~~~-   80 (305)
T PRK08303          5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA---GGRGIAVQVDHLVPE-   80 (305)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc---CCceEEEEcCCCCHH-
Confidence            4789999999999999999999999999999998842           3445555555432   356788999999999 


Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEcC-CCCC---CCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEe
Q 024517           71 GAFDEAVDKACQILGNLDAFVHCY-TYEG---KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLT  146 (266)
Q Consensus        71 ~~v~~~~~~~~~~~g~id~li~~a-g~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~is  146 (266)
                       +++++++++.+.||+||++|||| |...   ...++.+.+.++|++++++|+.+++.++++++|+|.+++ +|+||++|
T Consensus        81 -~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-~g~IV~is  158 (305)
T PRK08303         81 -QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-GGLVVEIT  158 (305)
T ss_pred             -HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-CcEEEEEC
Confidence             99999999999999999999999 7521   125677788999999999999999999999999998765 68999999


Q ss_pred             ccccccc-CCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--cHHHHHHHhhccC-CCCC
Q 024517          147 SIIGAER-GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKLVREAAP-LHRW  222 (266)
Q Consensus       147 s~~~~~~-~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~-~~~~  222 (266)
                      |..+... ...+....|+++|+|+.+|+++++.|+++.|||||+|+||+|+|++......  ++.... .....| .++.
T Consensus       159 S~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~~p~~~~~  237 (305)
T PRK08303        159 DGTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRD-ALAKEPHFAIS  237 (305)
T ss_pred             CccccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhh-hhccccccccC
Confidence            9765432 1134577899999999999999999999999999999999999998543211  111111 122456 3566


Q ss_pred             CCChhhHHHHHHHHccCCC-CcccccEEE
Q 024517          223 LDVKNDLASTVIYLISDGS-RYMTGTTIY  250 (266)
Q Consensus       223 ~~~~~dva~~~~~l~s~~~-~~~~G~~i~  250 (266)
                      .+|+ |+|+.++||+++.. .++||+.+.
T Consensus       238 ~~pe-evA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        238 ETPR-YVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             CCHH-HHHHHHHHHHcCcchhhcCCcEEE
Confidence            6777 99999999999874 589999875

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=2e-41  Score=308.84  Aligned_cols=244  Identities=25%  Similarity=0.358  Sum_probs=210.6

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ..+|++|||||++|||+++|++|+++|++|++++ +.++++++.+++      +.++..+.+|++|++  +++++++++.
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~--~~~~~~~~~~  338 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL------GDEHLSVQADITDEA--AVESAFAQIQ  338 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCceeEEEccCCCHH--HHHHHHHHHH
Confidence            4689999999999999999999999999999999 555555555443      246778999999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.+|++|++|||||......++.+.+.++|++++++|+.+++++++.++|+|.+   +|+||++||.++..+  .++...
T Consensus       339 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~~--~~~~~~  413 (520)
T PRK06484        339 ARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQ---GGVIVNLGSIASLLA--LPPRNA  413 (520)
T ss_pred             HHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhcc---CCEEEEECchhhcCC--CCCCch
Confidence            999999999999998544567788899999999999999999999999999932   589999999998776  688899


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-cHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      |+++|++++.|+++++.|+.++|||||+|+||+|+|++...... .......+....|.+++.+|+ |+|+.++||+++.
T Consensus       414 Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dia~~~~~l~s~~  492 (520)
T PRK06484        414 YCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPE-EVAEAIAFLASPA  492 (520)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCcc
Confidence            99999999999999999999999999999999999998754322 122234445677888888887 9999999999988


Q ss_pred             CCcccccEEEEcCCccccCC
Q 024517          241 SRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~~~~  260 (266)
                      ..+++|+.+.+|||...+..
T Consensus       493 ~~~~~G~~i~vdgg~~~~~~  512 (520)
T PRK06484        493 ASYVNGATLTVDGGWTAFGD  512 (520)
T ss_pred             ccCccCcEEEECCCccCCCC
Confidence            89999999999999765543

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.5e-41  Score=278.20  Aligned_cols=243  Identities=19%  Similarity=0.276  Sum_probs=204.4

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |.+++|++|||||++|||+++|+.|+++|++|+++. +. ++.++...++      +.++.++.+|+++++  +++++++
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~--~~~~~~~   72 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL------GDRAIALQADVTDRE--QVQAMFA   72 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh------CCceEEEEcCCCCHH--HHHHHHH
Confidence            788999999999999999999999999999999876 33 2222222222      147889999999988  9999999


Q ss_pred             HHHHHhCC-CCEEEEcCCCCC-----CCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccc
Q 024517           79 KACQILGN-LDAFVHCYTYEG-----KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAE  152 (266)
Q Consensus        79 ~~~~~~g~-id~li~~ag~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~  152 (266)
                      ++.+.+++ +|++|||||...     ...++.+.+.++|++.+++|+.+++.+++.++|+|.+.+ .++|++++|..+..
T Consensus        73 ~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~  151 (253)
T PRK08642         73 TATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-FGRIINIGTNLFQN  151 (253)
T ss_pred             HHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-CeEEEEECCccccC
Confidence            99998887 999999998631     123566788999999999999999999999999997765 58999999986654


Q ss_pred             cCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHH
Q 024517          153 RGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAST  232 (266)
Q Consensus       153 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  232 (266)
                      +  ..++..|+++|++++.|++.++++++++|||||+|+||+++|+...... ++.....+.+..|++++.+|+ |+++.
T Consensus       152 ~--~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~va~~  227 (253)
T PRK08642        152 P--VVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAAT-PDEVFDLIAATTPLRKVTTPQ-EFADA  227 (253)
T ss_pred             C--CCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccC-CHHHHHHHHhcCCcCCCCCHH-HHHHH
Confidence            4  4567899999999999999999999999999999999999998654322 334445556778888988888 99999


Q ss_pred             HHHHccCCCCcccccEEEEcCCcc
Q 024517          233 VIYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       233 ~~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      +.+|+++.+++++|+.|.+|||..
T Consensus       228 ~~~l~~~~~~~~~G~~~~vdgg~~  251 (253)
T PRK08642        228 VLFFASPWARAVTGQNLVVDGGLV  251 (253)
T ss_pred             HHHHcCchhcCccCCEEEeCCCee
Confidence            999999888999999999999954

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1e-43  Score=264.97  Aligned_cols=240  Identities=24%  Similarity=0.324  Sum_probs=214.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++.|+++++||++.|||+++++.|++.|+.|+.+. +++.+..+.++.    +  .-+..+..|+++++  .+.+.+.. 
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~----p--~~I~Pi~~Dls~we--a~~~~l~~-   74 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET----P--SLIIPIVGDLSAWE--ALFKLLVP-   74 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC----C--cceeeeEecccHHH--HHHHhhcc-
Confidence            36799999999999999999999999999999999 666666655543    1  35888999999977  65555543 


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                         .+++|.++||||+ .-.+||.+.+.++|+..|.+|+++.+...|.....+..+..+|.|+++||.++.++  +.+..
T Consensus        75 ---v~pidgLVNNAgv-A~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~--~~nHt  148 (245)
T KOG1207|consen   75 ---VFPIDGLVNNAGV-ATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRP--LDNHT  148 (245)
T ss_pred             ---cCchhhhhccchh-hhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccc--cCCce
Confidence               3689999999999 67789999999999999999999999999997777666655799999999999887  78999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .||++|+|+.+++|+++.|+++.+||||+|.|-.+.|+|-+..-.++...+.+.+++|++|+...+ |+.++++||+|+.
T Consensus       149 vYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~-eVVnA~lfLLSd~  227 (245)
T KOG1207|consen  149 VYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVD-EVVNAVLFLLSDN  227 (245)
T ss_pred             EEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHH-HHHhhheeeeecC
Confidence            999999999999999999999999999999999999999988777787888899999999999998 9999999999999


Q ss_pred             CCcccccEEEEcCCccc
Q 024517          241 SRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~  257 (266)
                      ++..||..+.++||++-
T Consensus       228 ssmttGstlpveGGfs~  244 (245)
T KOG1207|consen  228 SSMTTGSTLPVEGGFSN  244 (245)
T ss_pred             cCcccCceeeecCCccC
Confidence            99999999999999874

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-41  Score=281.61  Aligned_cols=234  Identities=19%  Similarity=0.300  Sum_probs=194.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +|+++|||+ +|||+++|++|+ +|++|++++ +.+++++..+++...   +.++.++.+|+++.+  ++.++++++ +.
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~d~~--~i~~~~~~~-~~   73 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA---GFDVSTQEVDVSSRE--SVKALAATA-QT   73 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEEeecCCHH--HHHHHHHHH-Hh
Confidence            589999998 599999999996 899999999 556666666666432   357889999999999  999999988 56


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC--------
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL--------  155 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~--------  155 (266)
                      ++++|++|||||.. .       ..++|+.++++|+.+++++++.+.|.|.+   ++.+++|+|.++..+..        
T Consensus        74 ~g~id~li~nAG~~-~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~iv~isS~~~~~~~~~~~~~~~~  142 (275)
T PRK06940         74 LGPVTGLVHTAGVS-P-------SQASPEAILKVDLYGTALVLEEFGKVIAP---GGAGVVIASQSGHRLPALTAEQERA  142 (275)
T ss_pred             cCCCCEEEECCCcC-C-------chhhHHHHHHHhhHHHHHHHHHHHHHHhh---CCCEEEEEecccccCcccchhhhcc
Confidence            89999999999973 1       23679999999999999999999999965   47889999988765410        


Q ss_pred             -------------C-------CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--cHHHHHHH
Q 024517          156 -------------Y-------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKLV  213 (266)
Q Consensus       156 -------------~-------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~  213 (266)
                                   +       +++..|++||+|++.++++++.|++++|||||+|+||+++|++......  .++.....
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~  222 (275)
T PRK06940        143 LATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNM  222 (275)
T ss_pred             ccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHH
Confidence                         0       2467899999999999999999999999999999999999998654221  12233344


Q ss_pred             hhccCCCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          214 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       214 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      ....|++++++|+ |+|+.++||+|+.++++||+.+.+|||....
T Consensus       223 ~~~~p~~r~~~pe-eia~~~~fL~s~~~~~itG~~i~vdgg~~~~  266 (275)
T PRK06940        223 FAKSPAGRPGTPD-EIAALAEFLMGPRGSFITGSDFLVDGGATAS  266 (275)
T ss_pred             hhhCCcccCCCHH-HHHHHHHHHcCcccCcccCceEEEcCCeEEE
Confidence            5567899999998 9999999999998999999999999997643

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-40  Score=276.99  Aligned_cols=246  Identities=24%  Similarity=0.325  Sum_probs=210.9

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |.+++|+++||||++|||+++|++|+++|++|++++ +.+..++..+++...   +.++.++.+|+++.+  ++++++++
T Consensus         1 ~~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~   75 (258)
T PRK07890          1 MLLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL---GRRALAVPTDITDED--QCANLVAL   75 (258)
T ss_pred             CccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh---CCceEEEecCCCCHH--HHHHHHHH
Confidence            678999999999999999999999999999999999 555555665555432   357899999999988  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||......++.+.+.++|+.++++|+.+++.+++++.++|.+.+  ++||++||..+..+  .+++
T Consensus        76 ~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~ii~~sS~~~~~~--~~~~  151 (258)
T PRK07890         76 ALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG--GSIVMINSMVLRHS--QPKY  151 (258)
T ss_pred             HHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC--CEEEEEechhhccC--CCCc
Confidence            9999999999999999755556777888999999999999999999999999997653  79999999988766  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc---------ccHHHHHHHhhccCCCCCCCChhhHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV---------GQERAVKLVREAAPLHRWLDVKNDLA  230 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva  230 (266)
                      ..|+++|++++.++++++.+++++||++|.|+||++.||+.....         ..+..........|.+++.+++ |++
T Consensus       152 ~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva  230 (258)
T PRK07890        152 GAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDD-EVA  230 (258)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHH-HHH
Confidence            999999999999999999999999999999999999998764321         1123333444567788888887 999


Q ss_pred             HHHHHHccCCCCcccccEEEEcCCcc
Q 024517          231 STVIYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      +++.+++++...+++|+++.+|||..
T Consensus       231 ~a~~~l~~~~~~~~~G~~i~~~gg~~  256 (258)
T PRK07890        231 SAVLFLASDLARAITGQTLDVNCGEY  256 (258)
T ss_pred             HHHHHHcCHhhhCccCcEEEeCCccc
Confidence            99999999877899999999999964

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-40  Score=275.49  Aligned_cols=247  Identities=23%  Similarity=0.324  Sum_probs=208.5

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||.+++++|+++|++|++++ +.+.+++..+++...   +.++.++.+|+++++  ++++++++
T Consensus         5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~--~i~~~~~~   79 (264)
T PRK07576          5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA---GPEGLGVSADVRDYA--AVEAAFAQ   79 (264)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh---CCceEEEECCCCCHH--HHHHHHHH
Confidence            678899999999999999999999999999999999 555555555555432   246788999999988  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||+|.. ...++.+.+.++|+..+++|+.+++.+++++.|+|.++  +|+|+++||..+..+  .+.+
T Consensus        80 ~~~~~~~iD~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--~g~iv~iss~~~~~~--~~~~  154 (264)
T PRK07576         80 IADEFGPIDVLVSGAAGN-FPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP--GASIIQISAPQAFVP--MPMQ  154 (264)
T ss_pred             HHHHcCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCEEEEECChhhccC--CCCc
Confidence            999999999999999873 44567788899999999999999999999999998754  489999999887665  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCccc-CCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL-QDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ..|+++|++++.|+++++.++..+||+++.|+||+++ |+........+..........|+++..+|+ |+|+.+.+|++
T Consensus       155 ~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~  233 (264)
T PRK07576        155 AHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQ-DIANAALFLAS  233 (264)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHcC
Confidence            9999999999999999999999999999999999997 554433332333334444557788888877 99999999999


Q ss_pred             CCCCcccccEEEEcCCcccc
Q 024517          239 DGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~~~  258 (266)
                      +...+++|+.+.+|||..+.
T Consensus       234 ~~~~~~~G~~~~~~gg~~~~  253 (264)
T PRK07576        234 DMASYITGVVLPVDGGWSLG  253 (264)
T ss_pred             hhhcCccCCEEEECCCcccC
Confidence            88889999999999997644

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.1e-40  Score=272.00  Aligned_cols=246  Identities=24%  Similarity=0.353  Sum_probs=209.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEE-e-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLV-G-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      |+++++|||||+++||++++++|+++|++|+++ . +.++.++..++++..   +.++.++.+|+++++  ++.++++++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~~   76 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL---GRKALAVKANVGDVE--KIKEMFAQI   76 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCeEEEEEcCCCCHH--HHHHHHHHH
Confidence            468999999999999999999999999998875 4 444555566666543   357889999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||+|. ....++.+.+.++++..+++|+.+++.+++++.|+|.+++ .|+||++||..+..+  .+...
T Consensus        77 ~~~~~~id~vi~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~--~~~~~  152 (250)
T PRK08063         77 DEEFGRLDVFVNNAAS-GVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG-GGKIISLSSLGSIRY--LENYT  152 (250)
T ss_pred             HHHcCCCCEEEECCCC-CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhccC--CCCcc
Confidence            9999999999999987 4556788889999999999999999999999999998766 689999999877665  57788


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.|+++++.++.+.||++|+|.||++.|++..................|.+++.+++ |+++.+.+++++.
T Consensus       153 ~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~~~~~~  231 (250)
T PRK08063        153 TVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPE-DVANAVLFLCSPE  231 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHH-HHHHHHHHHcCch
Confidence            999999999999999999999899999999999999998654333333333444566777777887 9999999999988


Q ss_pred             CCcccccEEEEcCCcccc
Q 024517          241 SRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~~  258 (266)
                      ..+++|+.+.+|||.++.
T Consensus       232 ~~~~~g~~~~~~gg~~~~  249 (250)
T PRK08063        232 ADMIRGQTIIVDGGRSLL  249 (250)
T ss_pred             hcCccCCEEEECCCeeee
Confidence            889999999999998754

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-39  Score=271.43  Aligned_cols=250  Identities=26%  Similarity=0.397  Sum_probs=212.8

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||++++++|+++|++|++++ +.++.++..+.+...   +.++.++.+|+++.+  ++.++++++
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~--~~~~~~~~~   81 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA---GRRAHVVAADLAHPE--ATAGLAGQA   81 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEccCCCHH--HHHHHHHHH
Confidence            46799999999999999999999999999999999 555666666666432   357889999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++||+||.. ...++.+.+.++++.++++|+.+++.+.+++.|+|.+....++++++||..+..+  .++..
T Consensus        82 ~~~~~~id~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~--~~~~~  158 (263)
T PRK07814         82 VEAFGRLDIVVNNVGGT-MPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLA--GRGFA  158 (263)
T ss_pred             HHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCC--CCCCc
Confidence            99999999999999974 4456778899999999999999999999999999987433689999999988776  57889


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.++++++.++.+ +|++|+|+||++.|++..................|..+..+++ |+|+.++|++++.
T Consensus       159 ~Y~~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~~~~  236 (263)
T PRK07814        159 AYGTAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPE-DIAAAAVYLASPA  236 (263)
T ss_pred             hhHHHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCcc
Confidence            9999999999999999999987 6999999999999997654322334444445566777777777 9999999999988


Q ss_pred             CCcccccEEEEcCCccccCCC
Q 024517          241 SRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      ..+++|+.+.+|||....+-.
T Consensus       237 ~~~~~g~~~~~~~~~~~~~~~  257 (263)
T PRK07814        237 GSYLTGKTLEVDGGLTFPNLD  257 (263)
T ss_pred             ccCcCCCEEEECCCccCCCCC
Confidence            899999999999998774433

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-40  Score=273.90  Aligned_cols=241  Identities=23%  Similarity=0.284  Sum_probs=201.4

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++++|++|||||++|||++++++|+++|++|+++++.+..     ..      ..++.++.+|+++.+  +++++++++.
T Consensus         6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~-----~~------~~~~~~~~~D~~~~~--~~~~~~~~~~   72 (260)
T PRK06523          6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPD-----DL------PEGVEFVAADLTTAE--GCAAVARAVL   72 (260)
T ss_pred             CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhh-----hc------CCceeEEecCCCCHH--HHHHHHHHHH
Confidence            4679999999999999999999999999999999843221     11      246789999999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCC-CCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           82 QILGNLDAFVHCYTYEG-KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      +.++++|++|||||... ...++.+.+.++|+..+++|+.+++.+++.++|+|.+++ .++||++||..+..+. .+...
T Consensus        73 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~-~~~~~  150 (260)
T PRK06523         73 ERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRRLPL-PESTT  150 (260)
T ss_pred             HHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccccCCC-CCCcc
Confidence            99999999999999642 234566788999999999999999999999999998765 5899999999876552 13788


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc---------cHHHHHH---HhhccCCCCCCCChhh
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---------QERAVKL---VREAAPLHRWLDVKND  228 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~---------~~~~~~~---~~~~~~~~~~~~~~~d  228 (266)
                      .|+++|++++.|++.++.++.++||++|+|+||+|+|++......         .++..+.   .....|.+++.+|+ |
T Consensus       151 ~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~  229 (260)
T PRK06523        151 AYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPE-E  229 (260)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHH-H
Confidence            999999999999999999999999999999999999998643211         1111111   12347888888887 9


Q ss_pred             HHHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          229 LASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       229 va~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      +++.+.||+++..++++|+.+.+|||...+
T Consensus       230 va~~~~~l~s~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        230 VAELIAFLASDRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             HHHHHHHHhCcccccccCceEEecCCccCC
Confidence            999999999998899999999999996543

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=1.6e-39  Score=267.38  Aligned_cols=233  Identities=20%  Similarity=0.289  Sum_probs=194.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      +|++|||||++|||++++++|+++|++|+++++.+.  +..+.+...     .+.++.+|+++.+  +++++++++.+.+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~~~~-----~~~~~~~D~~~~~--~~~~~~~~~~~~~   72 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHY--PAIDGLRQA-----GAQCIQADFSTNA--GIMAFIDELKQHT   72 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCch--hHHHHHHHc-----CCEEEEcCCCCHH--HHHHHHHHHHhhC
Confidence            589999999999999999999999999999984322  223333321     3678899999999  9999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC-CCCeEEEEecccccccCCCCCchhhH
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK-AGGSIVFLTSIIGAERGLYPGAAAYG  163 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~~~~~y~  163 (266)
                      +++|++|||||.. ....+.+.+.++|+.++++|+.+++.+++.+.|.|.+.+ ..++|+++||..+..+  .+++..|+
T Consensus        73 ~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~--~~~~~~Y~  149 (236)
T PRK06483         73 DGLRAIIHNASDW-LAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKG--SDKHIAYA  149 (236)
T ss_pred             CCccEEEECCccc-cCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccC--CCCCccHH
Confidence            9999999999974 334455678899999999999999999999999997653 1479999999887665  57889999


Q ss_pred             HhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCc
Q 024517          164 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY  243 (266)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  243 (266)
                      ++|+++++|+++++.|+++ +||||+|+||++.|+...    .+...+......|+++..+|+ |+++.+.||++  ..+
T Consensus       150 asKaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~~--~~~  221 (236)
T PRK06483        150 ASKAALDNMTLSFAAKLAP-EVKVNSIAPALILFNEGD----DAAYRQKALAKSLLKIEPGEE-EIIDLVDYLLT--SCY  221 (236)
T ss_pred             HHHHHHHHHHHHHHHHHCC-CcEEEEEccCceecCCCC----CHHHHHHHhccCccccCCCHH-HHHHHHHHHhc--CCC
Confidence            9999999999999999987 599999999999876421    223333445567888888887 99999999997  579


Q ss_pred             ccccEEEEcCCccc
Q 024517          244 MTGTTIYVDGAQSI  257 (266)
Q Consensus       244 ~~G~~i~~dgG~~~  257 (266)
                      +||+++.+|||.++
T Consensus       222 ~~G~~i~vdgg~~~  235 (236)
T PRK06483        222 VTGRSLPVDGGRHL  235 (236)
T ss_pred             cCCcEEEeCccccc
Confidence            99999999999764

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-39  Score=270.77  Aligned_cols=245  Identities=24%  Similarity=0.348  Sum_probs=210.5

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|+++||||+++||++++++|+++|++|++++ +.++++++..++...   +.++.++.+|+++.+  +++++++++
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~--~~~~~~~~~   80 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE---GGAAHVVSLDVTDYQ--SIKAAVAHA   80 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEecCCCHH--HHHHHHHHH
Confidence            36799999999999999999999999999999998 666666666666433   246889999999988  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCC-------CCeEEEEeccccccc
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA-------GGSIVFLTSIIGAER  153 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~g~iv~iss~~~~~~  153 (266)
                      .+.++++|++|||+|.. ...++.+.+.++|+.++++|+.+++.+++++.|.|.+...       .+++|++||..+..+
T Consensus        81 ~~~~~~~d~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~  159 (258)
T PRK06949         81 ETEAGTIDILVNNSGVS-TTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV  159 (258)
T ss_pred             HHhcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC
Confidence            99999999999999984 4456777788999999999999999999999999876531       479999999887665


Q ss_pred             CCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHH
Q 024517          154 GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTV  233 (266)
Q Consensus       154 ~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  233 (266)
                        .+....|+++|++++.+++.++.++.++||++++|+||+|+|++....... ..........|.++++.|+ |+++.+
T Consensus       160 --~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~p~-~~~~~~  235 (258)
T PRK06949        160 --LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWET-EQGQKLVSMLPRKRVGKPE-DLDGLL  235 (258)
T ss_pred             --CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccCh-HHHHHHHhcCCCCCCcCHH-HHHHHH
Confidence              577889999999999999999999999999999999999999986543322 2234455677888889988 999999


Q ss_pred             HHHccCCCCcccccEEEEcCCcc
Q 024517          234 IYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       234 ~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      .||+++.+++++|+.+.+|||+.
T Consensus       236 ~~l~~~~~~~~~G~~i~~dgg~~  258 (258)
T PRK06949        236 LLLAADESQFINGAIISADDGFG  258 (258)
T ss_pred             HHHhChhhcCCCCcEEEeCCCCC
Confidence            99999989999999999999963

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-39  Score=274.64  Aligned_cols=245  Identities=24%  Similarity=0.353  Sum_probs=208.3

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-ccc-ccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NER-RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      +++++|++|||||++|||++++++|+++|++|++++ +.+ ..++..+.+...   +.++.++.+|+++.+  +++++++
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~~~~~~~  116 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE---GVKCLLIPGDVSDEA--FCKDAVE  116 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc---CCeEEEEEccCCCHH--HHHHHHH
Confidence            357789999999999999999999999999999988 432 344444444322   357889999999988  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++.+.++++|++|||||......++.+.+.++|+..+++|+.+++.+++++.++|++   .+++|++||..+..+  .+.
T Consensus       117 ~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~---~g~iV~isS~~~~~~--~~~  191 (290)
T PRK06701        117 ETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ---GSAIINTGSITGYEG--NET  191 (290)
T ss_pred             HHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh---CCeEEEEecccccCC--CCC
Confidence            999999999999999997544566778899999999999999999999999999954   479999999988766  477


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ...|+++|++++.++++++.++.++|||+++|+||+++|++...... .+....+....|.+++.+++ |+|+++++|++
T Consensus       192 ~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-dva~~~~~ll~  269 (290)
T PRK06701        192 LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFD-EEKVSQFGSNTPMQRPGQPE-ELAPAYVFLAS  269 (290)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccC-HHHHHHHHhcCCcCCCcCHH-HHHHHHHHHcC
Confidence            78999999999999999999999999999999999999998765432 22333445566888888887 99999999999


Q ss_pred             CCCCcccccEEEEcCCccc
Q 024517          239 DGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~~  257 (266)
                      +...+++|+.|.+|||...
T Consensus       270 ~~~~~~~G~~i~idgg~~~  288 (290)
T PRK06701        270 PDSSYITGQMLHVNGGVIV  288 (290)
T ss_pred             cccCCccCcEEEeCCCccc
Confidence            9889999999999999654

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=1.5e-39  Score=270.68  Aligned_cols=241  Identities=23%  Similarity=0.346  Sum_probs=202.6

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      .+++|++|||||+++||+++|++|+++|++|++++ +.++.++..+++      +.++.++.+|+++.+  +++++++++
T Consensus         7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~--~~~~~~~~~   78 (255)
T PRK05717          7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL------GENAWFIAMDVADEA--QVAAGVAEV   78 (255)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc------CCceEEEEccCCCHH--HHHHHHHHH
Confidence            36899999999999999999999999999999998 544444443332      246889999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCC-CCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           81 CQILGNLDAFVHCYTYEGKM-QDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      .+.++++|++|||||..... .++.+.+.++|+..+++|+.+++.+++.+.|+|.+.  .++||++||..+..+  .+..
T Consensus        79 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~ii~~sS~~~~~~--~~~~  154 (255)
T PRK05717         79 LGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH--NGAIVNLASTRARQS--EPDT  154 (255)
T ss_pred             HHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CcEEEEEcchhhcCC--CCCC
Confidence            99999999999999985432 466778899999999999999999999999999764  489999999988766  5778


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.+++.++.++.. +|+||+|+||+++|++..... ............|.++.++|+ |+++.+.+++++
T Consensus       155 ~~Y~~sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~~~  231 (255)
T PRK05717        155 EAYAASKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPSQRR-AEPLSEADHAQHPAGRVGTVE-DVAAMVAWLLSR  231 (255)
T ss_pred             cchHHHHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCcccccc-chHHHHHHhhcCCCCCCcCHH-HHHHHHHHHcCc
Confidence            89999999999999999999986 499999999999998754321 122222233456788888887 999999999998


Q ss_pred             CCCcccccEEEEcCCccc
Q 024517          240 GSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~  257 (266)
                      ...+++|+.+.+|||.++
T Consensus       232 ~~~~~~g~~~~~~gg~~~  249 (255)
T PRK05717        232 QAGFVTGQEFVVDGGMTR  249 (255)
T ss_pred             hhcCccCcEEEECCCceE
Confidence            888999999999999764

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-39  Score=271.26  Aligned_cols=246  Identities=18%  Similarity=0.262  Sum_probs=208.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +|++|||||+++||++++++|+++|++|++++ +.+..++..+++....+ ..++.++.+|+++.+  ++.++++++.+.
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~--~i~~~~~~~~~~   78 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYG-EGMAYGFGADATSEQ--SVLALSRGVDEI   78 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcC-CceeEEEEccCCCHH--HHHHHHHHHHHH
Confidence            68999999999999999999999999999999 65666666666654322 146899999999988  999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhH
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG  163 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~  163 (266)
                      ++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+.+++.+.|.+++..+++|++||..+..+  .+....|+
T Consensus        79 ~~~id~vv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~--~~~~~~Y~  155 (259)
T PRK12384         79 FGRVDLLVYNAGIA-KAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVG--SKHNSGYS  155 (259)
T ss_pred             cCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccC--CCCCchhH
Confidence            99999999999974 4567778899999999999999999999999999976542479999999887665  46778999


Q ss_pred             HhHHHHHHHHHHHHHHhCCCCcEEEEEecCcc-cCCCcccccc---------cHHHHHHHhhccCCCCCCCChhhHHHHH
Q 024517          164 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLH-LQDEYPIAVG---------QERAVKLVREAAPLHRWLDVKNDLASTV  233 (266)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v-~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~  233 (266)
                      ++|++++.++++++.|++++||+||+|.||.+ .++++.....         .++..+...+..|++++.+++ |+++++
T Consensus       156 ~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dv~~~~  234 (259)
T PRK12384        156 AAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQ-DVLNML  234 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHH-HHHHHH
Confidence            99999999999999999999999999999975 6666543221         223334445677889999998 999999


Q ss_pred             HHHccCCCCcccccEEEEcCCccc
Q 024517          234 IYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       234 ~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      ++|++....+++|+.+.+|||..+
T Consensus       235 ~~l~~~~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        235 LFYASPKASYCTGQSINVTGGQVM  258 (259)
T ss_pred             HHHcCcccccccCceEEEcCCEEe
Confidence            999998888999999999999765

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-40  Score=267.44  Aligned_cols=223  Identities=17%  Similarity=0.211  Sum_probs=190.2

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|+++||||++|||+++|++|+++|++|++++ +.+++++..+++.+.   +.++..+.+|+++++  ++++++++
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~---~~~~~~~~~D~~~~~--~~~~~~~~   75 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL---TDNVYSFQLKDFSQE--SIRHLFDA   75 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc---CCCeEEEEccCCCHH--HHHHHHHH
Confidence            889999999999999999999999999999999999 777777777777543   356888999999988  99999999


Q ss_pred             HHHHhC-CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           80 ACQILG-NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        80 ~~~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      +.+.++ +||++|||+|......++.+.+.++|.+.+++|+.+++.+++.++|+|.+++++|.||++||..+     .++
T Consensus        76 ~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~-----~~~  150 (227)
T PRK08862         76 IEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDD-----HQD  150 (227)
T ss_pred             HHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCC-----CCC
Confidence            999998 99999999986445567788899999999999999999999999999987543689999999653     356


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      +..|+++|+++.+|+++++.|+.++|||||+|+||+++|+....   ...+ ...            .+|++....||++
T Consensus       151 ~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~~---~~~~-~~~------------~~~~~~~~~~l~~  214 (227)
T PRK08862        151 LTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGELD---AVHW-AEI------------QDELIRNTEYIVA  214 (227)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCccC---HHHH-HHH------------HHHHHhheeEEEe
Confidence            78899999999999999999999999999999999999983211   1111 111            1499999999997


Q ss_pred             CCCCcccccEEEE
Q 024517          239 DGSRYMTGTTIYV  251 (266)
Q Consensus       239 ~~~~~~~G~~i~~  251 (266)
                        ..++||+.+..
T Consensus       215 --~~~~tg~~~~~  225 (227)
T PRK08862        215 --NEYFSGRVVEA  225 (227)
T ss_pred             --cccccceEEee
Confidence              57999998754

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.2e-39  Score=268.68  Aligned_cols=247  Identities=27%  Similarity=0.419  Sum_probs=213.5

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |+++++++|||||+++||++++++|+++|++|++++ +.++.++....+..    +.++.++.+|+++.+  ++++++++
T Consensus         1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~--~~~~~~~~   74 (251)
T PRK07231          1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA----GGRAIAVAADVSDEA--DVEAAVAA   74 (251)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc----CCeEEEEECCCCCHH--HHHHHHHH
Confidence            789999999999999999999999999999999999 55555555555533    256889999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++||++|......++.+.+.++++..+++|+.+++.+++.++++|.+++ .+++|++||..+..+  .++.
T Consensus        75 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~--~~~~  151 (251)
T PRK07231         75 ALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGLRP--RPGL  151 (251)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcCC--CCCc
Confidence            9999999999999999855556677888999999999999999999999999998765 689999999988766  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc--HHHHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ--ERAVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      ..|+.+|++++.+++.++.++++.||++++|+||+++|++.......  ++....+....|.+++.+++ |+|+.+++|+
T Consensus       152 ~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~  230 (251)
T PRK07231        152 GWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPE-DIANAALFLA  230 (251)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHH-HHHHHHHHHh
Confidence            99999999999999999999998899999999999999987654321  23334455667777888887 9999999999


Q ss_pred             cCCCCcccccEEEEcCCccc
Q 024517          238 SDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       238 s~~~~~~~G~~i~~dgG~~~  257 (266)
                      ++...+++|+.+.+|||..+
T Consensus       231 ~~~~~~~~g~~~~~~gg~~~  250 (251)
T PRK07231        231 SDEASWITGVTLVVDGGRCV  250 (251)
T ss_pred             CccccCCCCCeEEECCCccC
Confidence            98888999999999999754

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-39  Score=270.93  Aligned_cols=247  Identities=22%  Similarity=0.313  Sum_probs=204.4

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+.. +..+++...   +.++.++.+|+++.+  ++++++++
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~   76 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL---QPRAEFVQVDLTDDA--QCRDAVEQ   76 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc---CCceEEEEccCCCHH--HHHHHHHH
Confidence            478999999999999999999999999999999988 44433 555555433   357899999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||+|.. ....+.... ++|+..+++|+.+++.+++.+.|.|++.  .++|+++||..+..+  .+..
T Consensus        77 ~~~~~~~id~vi~~ag~~-~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~--~~~~  150 (258)
T PRK08628         77 TVAKFGRIDGLVNNAGVN-DGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS--RGAIVNISSKTALTG--QGGT  150 (258)
T ss_pred             HHHhcCCCCEEEECCccc-CCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc--CcEEEEECCHHhccC--CCCC
Confidence            999999999999999973 333444444 9999999999999999999999998754  489999999988766  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc----ccHHHHHHHhhccCCC-CCCCChhhHHHHHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV----GQERAVKLVREAAPLH-RWLDVKNDLASTVI  234 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~  234 (266)
                      ..|+++|++++.+++.++.|+.++||++|+|.||.|+|++.....    .............|.+ ++.+|+ |+|+.+.
T Consensus       151 ~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~  229 (258)
T PRK08628        151 SGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAE-EIADTAV  229 (258)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHH-HHHHHHH
Confidence            999999999999999999999999999999999999999764321    1122223333445654 667776 9999999


Q ss_pred             HHccCCCCcccccEEEEcCCccccCC
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                      +++++...+++|+.+.+|||.+..+.
T Consensus       230 ~l~~~~~~~~~g~~~~~~gg~~~~~~  255 (258)
T PRK08628        230 FLLSERSSHTTGQWLFVDGGYVHLDR  255 (258)
T ss_pred             HHhChhhccccCceEEecCCcccccc
Confidence            99999888999999999999765543

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=3e-39  Score=267.28  Aligned_cols=243  Identities=19%  Similarity=0.241  Sum_probs=206.1

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe--cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG--NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      |++|++|||||++|||+++|++|+++|++|++..  +....++..+++...   +.++..+.+|+++.+  +++++++++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~~   75 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL---GFDFIASEGNVGDWD--STKAAFDKV   75 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc---CCcEEEEEcCCCCHH--HHHHHHHHH
Confidence            4589999999999999999999999999988854  333444444554432   357888899999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||+|.. ...++.+.+.++|++++++|+.+++.+++.++|.|.+.+ .++||++||..+..+  .+++.
T Consensus        76 ~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~--~~~~~  151 (246)
T PRK12938         76 KAEVGEIDVLVNNAGIT-RDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKG--QFGQT  151 (246)
T ss_pred             HHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechhccCC--CCCCh
Confidence            99999999999999984 445677889999999999999999999999999997765 589999999887766  57889


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.|+++++.++.+.||++|+|+||+++|++....  .++.........|..++.+++ |+++.+.+|+++.
T Consensus       152 ~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~l~~~~  228 (246)
T PRK12938        152 NYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI--RPDVLEKIVATIPVRRLGSPD-EIGSIVAWLASEE  228 (246)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc--ChHHHHHHHhcCCccCCcCHH-HHHHHHHHHcCcc
Confidence            9999999999999999999999999999999999999987543  222333444456777878777 9999999999988


Q ss_pred             CCcccccEEEEcCCccc
Q 024517          241 SRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~  257 (266)
                      ..+++|+.+.+|||..+
T Consensus       229 ~~~~~g~~~~~~~g~~~  245 (246)
T PRK12938        229 SGFSTGADFSLNGGLHM  245 (246)
T ss_pred             cCCccCcEEEECCcccC
Confidence            89999999999999653

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-39  Score=268.18  Aligned_cols=240  Identities=25%  Similarity=0.340  Sum_probs=203.5

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|+++||||+++||++++++|+++|++|++++ +.+.+++..+++      +.++.++.+|+++.+  ++.++++.+
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~--~~~~~~~~~   74 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL------GESALVIRADAGDVA--AQKALAQAL   74 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh------CCceEEEEecCCCHH--HHHHHHHHH
Confidence            56899999999999999999999999999999998 444444444333      257889999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||+|.. ...++.+.+.++++.++++|+.+++.+++++.|+|.+   .+++++++|..+..+  .+...
T Consensus        75 ~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~i~~~S~~~~~~--~~~~~  148 (249)
T PRK06500         75 AEAFGRLDAVFINAGVA-KFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN---PASIVLNGSINAHIG--MPNSS  148 (249)
T ss_pred             HHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEechHhccC--CCCcc
Confidence            99999999999999974 4456777899999999999999999999999999864   478999999887766  57889


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----cHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      .|+++|++++.++++++.|+.++||+++.|+||.++||+......    .....+......|.+++.+|+ |+++++.+|
T Consensus       149 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l  227 (249)
T PRK06500        149 VYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPE-EIAKAVLYL  227 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHH-HHHHHHHHH
Confidence            999999999999999999999999999999999999997643211    122333444566888888887 999999999


Q ss_pred             ccCCCCcccccEEEEcCCcc
Q 024517          237 ISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~~  256 (266)
                      +++...+++|+.+.+|||.+
T Consensus       228 ~~~~~~~~~g~~i~~~gg~~  247 (249)
T PRK06500        228 ASDESAFIVGSEIIVDGGMS  247 (249)
T ss_pred             cCccccCccCCeEEECCCcc
Confidence            99888999999999999954

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-39  Score=267.13  Aligned_cols=242  Identities=21%  Similarity=0.320  Sum_probs=208.3

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |.+++|+++||||+++||+++|++|+++|++|+++. +. +..++..+++...   +.++.++.+|+++.+  +++++++
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~~~~~~~   75 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA---GGRAIAVQADVADAA--AVTRLFD   75 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc---CCeEEEEECCCCCHH--HHHHHHH
Confidence            788999999999999999999999999999998877 33 2344455555432   357899999999999  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|.|.+   .++++++||..+..+  .+.
T Consensus        76 ~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~~~--~~~  149 (245)
T PRK12937         76 AAETAFGRIDVLVNNAGVM-PLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ---GGRIINLSTSVIALP--LPG  149 (245)
T ss_pred             HHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc---CcEEEEEeeccccCC--CCC
Confidence            9999999999999999984 4466777889999999999999999999999999864   479999999877665  578


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ...|+++|++++.++++++.++...||+++.|+||+++|+++.... .......+....|.+++.+++ |+++.+.+|++
T Consensus       150 ~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-d~a~~~~~l~~  227 (245)
T PRK12937        150 YGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGK-SAEQIDQLAGLAPLERLGTPE-EIAAAVAFLAG  227 (245)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccC-CHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHcC
Confidence            8999999999999999999999999999999999999999864332 233344556677888888887 99999999999


Q ss_pred             CCCCcccccEEEEcCCc
Q 024517          239 DGSRYMTGTTIYVDGAQ  255 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~  255 (266)
                      +...+++|+.+.+|||.
T Consensus       228 ~~~~~~~g~~~~~~~g~  244 (245)
T PRK12937        228 PDGAWVNGQVLRVNGGF  244 (245)
T ss_pred             ccccCccccEEEeCCCC
Confidence            88889999999999985

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.3e-39  Score=264.80  Aligned_cols=215  Identities=21%  Similarity=0.271  Sum_probs=190.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +.+|++||||||++|+|+++|.+|+++|+++++.| +.+..+++.+++++.    ++++.+.||+++.+  ++.+..+++
T Consensus        35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~----g~~~~y~cdis~~e--ei~~~a~~V  108 (300)
T KOG1201|consen   35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI----GEAKAYTCDISDRE--EIYRLAKKV  108 (300)
T ss_pred             hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc----CceeEEEecCCCHH--HHHHHHHHH
Confidence            35799999999999999999999999999999999 999999999999866    38999999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      ++++|.+|++|||||+ -+..++.+.+++++++++++|+.++++.+|+++|.|.+.. .|+||.|+|++|..+  .++..
T Consensus       109 k~e~G~V~ILVNNAGI-~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS~aG~~g--~~gl~  184 (300)
T KOG1201|consen  109 KKEVGDVDILVNNAGI-VTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIASVAGLFG--PAGLA  184 (300)
T ss_pred             HHhcCCceEEEecccc-ccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehhhhcccC--Cccch
Confidence            9999999999999999 5778899999999999999999999999999999999877 799999999999988  68999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhC---CCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          161 AYGACAASIHQLVRTAAMEIG---KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~---~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      +|++||+|+.+|++++..|+.   .+||+...|+|++++|.|+....          ....+-+..+|+ .+|+.|+.-+
T Consensus       185 ~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~----------~~~~l~P~L~p~-~va~~Iv~ai  253 (300)
T KOG1201|consen  185 DYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGAT----------PFPTLAPLLEPE-YVAKRIVEAI  253 (300)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCC----------CCccccCCCCHH-HHHHHHHHHH
Confidence            999999999999999999985   35799999999999999987511          111122334555 7777776654

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.6e-39  Score=267.08  Aligned_cols=234  Identities=22%  Similarity=0.338  Sum_probs=197.9

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      |++++|+++||||+++||++++++|+++|++|+++++.....     .      ..++.++.+|++++        ++++
T Consensus         1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----~------~~~~~~~~~D~~~~--------~~~~   61 (235)
T PRK06550          1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD-----L------SGNFHFLQLDLSDD--------LEPL   61 (235)
T ss_pred             CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc-----c------CCcEEEEECChHHH--------HHHH
Confidence            789999999999999999999999999999999988432211     0      14678889999873        4445


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||+|......++.+.+.++|++++++|+.+++.++++++|.|.+++ .++||++||..+..+  .++..
T Consensus        62 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~--~~~~~  138 (235)
T PRK06550         62 FDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIINMCSIASFVA--GGGGA  138 (235)
T ss_pred             HHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccC--CCCCc
Confidence            556689999999999754445677888999999999999999999999999998766 689999999988766  47788


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.++++++.++.+.||++|+|+||+++|++......+...........|++++.+|+ |+|+.+++|+++.
T Consensus       139 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~l~s~~  217 (235)
T PRK06550        139 AYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPE-EVAELTLFLASGK  217 (235)
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHH-HHHHHHHHHcChh
Confidence            999999999999999999999999999999999999998654333334444455677888888887 9999999999988


Q ss_pred             CCcccccEEEEcCCccc
Q 024517          241 SRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~  257 (266)
                      ..+++|+++.+|||.++
T Consensus       218 ~~~~~g~~~~~~gg~~~  234 (235)
T PRK06550        218 ADYMQGTIVPIDGGWTL  234 (235)
T ss_pred             hccCCCcEEEECCceec
Confidence            89999999999999754

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=3e-39  Score=268.19  Aligned_cols=239  Identities=21%  Similarity=0.305  Sum_probs=205.3

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      |++++|++|||||+++||++++++|+++|++|+++++..        +...   +.++.++.+|+++.+  +++++++++
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~--------~~~~---~~~~~~~~~D~~~~~--~~~~~~~~~   70 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF--------LTQE---DYPFATFVLDVSDAA--AVAQVCQRL   70 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch--------hhhc---CCceEEEEecCCCHH--HHHHHHHHH
Confidence            567899999999999999999999999999999998433        1111   357889999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||+|.. ...++.+.+.++++..+++|+.+++.+++++.|+|.+++ .++|+++||..+..+  .++..
T Consensus        71 ~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ss~~~~~~--~~~~~  146 (252)
T PRK08220         71 LAETGPLDVLVNAAGIL-RMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTVGSNAAHVP--RIGMA  146 (252)
T ss_pred             HHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCchhccC--CCCCc
Confidence            99999999999999984 456777888999999999999999999999999998765 689999999887665  57788


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHH--------HHHHHhhccCCCCCCCChhhHHHH
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQER--------AVKLVREAAPLHRWLDVKNDLAST  232 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~dva~~  232 (266)
                      .|+++|++++.|++.++.|+.+.||++|.|.||+++|++.........        .........|..++.+|+ |+|++
T Consensus       147 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~  225 (252)
T PRK08220        147 AYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQ-EIANA  225 (252)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHH-HHHHH
Confidence            999999999999999999999999999999999999998654322111        112334456778888887 99999


Q ss_pred             HHHHccCCCCcccccEEEEcCCccc
Q 024517          233 VIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       233 ~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +++|+++...+++|+++.+|||..+
T Consensus       226 ~~~l~~~~~~~~~g~~i~~~gg~~~  250 (252)
T PRK08220        226 VLFLASDLASHITLQDIVVDGGATL  250 (252)
T ss_pred             HHHHhcchhcCccCcEEEECCCeec
Confidence            9999998889999999999999765

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=4.5e-39  Score=267.37  Aligned_cols=243  Identities=28%  Similarity=0.382  Sum_probs=209.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      |+++||||+++||++++++|+++|++|++++ +.++.++..+++...   +.++.++.+|+++++  ++.++++++.+.+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~--~i~~~~~~~~~~~   75 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA---GGKAVAYKLDVSDKD--QVFSAIDQAAEKF   75 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEEcCCCCHH--HHHHHHHHHHHHc
Confidence            6899999999999999999999999999998 555556665665533   357889999999999  9999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHH
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA  164 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~  164 (266)
                      +++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.+++.|.+.+.+++++++||..+..+  .+....|++
T Consensus        76 ~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~  152 (254)
T TIGR02415        76 GGFDVMVNNAGVA-PITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEG--NPILSAYSS  152 (254)
T ss_pred             CCCCEEEECCCcC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCC--CCCCcchHH
Confidence            9999999999984 5567778899999999999999999999999999987654589999999988776  578899999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc---------HHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          165 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ---------ERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      +|++++.|++.++.++.+.||++++|+||+++|+++......         ......+....|.+++.+|+ |+++++.+
T Consensus       153 sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~  231 (254)
T TIGR02415       153 TKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPE-DVAGLVSF  231 (254)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHH-HHHHHHHh
Confidence            999999999999999999999999999999999986543211         11123344567888888887 99999999


Q ss_pred             HccCCCCcccccEEEEcCCccc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      |+++...+++|+.+.+|||..+
T Consensus       232 l~~~~~~~~~g~~~~~d~g~~~  253 (254)
T TIGR02415       232 LASEDSDYITGQSILVDGGMVY  253 (254)
T ss_pred             hcccccCCccCcEEEecCCccC
Confidence            9999889999999999999653

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=7.5e-41  Score=260.13  Aligned_cols=233  Identities=18%  Similarity=0.247  Sum_probs=198.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++.||++++|||.+|||++++++|+++|..+.+++ +.|..+ ...++++.++. ..+.+++||+++..  ++++++++
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~-a~akL~ai~p~-~~v~F~~~DVt~~~--~~~~~f~k   76 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPE-AIAKLQAINPS-VSVIFIKCDVTNRG--DLEAAFDK   76 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHH-HHHHHhccCCC-ceEEEEEeccccHH--HHHHHHHH
Confidence            789999999999999999999999999999888877 777754 44566666664 79999999999988  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC--CCCeEEEEecccccccCCCC
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK--AGGSIVFLTSIIGAERGLYP  157 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~g~iv~iss~~~~~~~~~~  157 (266)
                      +.++||.||++||+||+         .++++|++++.+|+.|.+.-+...+|||.++.  ++|-||++||+.|+.|  .|
T Consensus        77 i~~~fg~iDIlINgAGi---------~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P--~p  145 (261)
T KOG4169|consen   77 ILATFGTIDILINGAGI---------LDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDP--MP  145 (261)
T ss_pred             HHHHhCceEEEEccccc---------ccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCc--cc
Confidence            99999999999999998         35688999999999999999999999998875  5799999999999999  79


Q ss_pred             CchhhHHhHHHHHHHHHHHHHH--hCCCCcEEEEEecCcccCCCcccccc------cHHHHHHHhhccCCCCCCCChhhH
Q 024517          158 GAAAYGACAASIHQLVRTAAME--IGKHKIRVNGIARGLHLQDEYPIAVG------QERAVKLVREAAPLHRWLDVKNDL  229 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e--~~~~~i~v~~v~pG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dv  229 (266)
                      ..+.|++||+++..|+|+++..  |.+.|||+++||||++.|++......      .++......++.|   ...|+ ++
T Consensus       146 ~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~---~q~~~-~~  221 (261)
T KOG4169|consen  146 VFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAP---KQSPA-CC  221 (261)
T ss_pred             cchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcc---cCCHH-HH
Confidence            9999999999999999998875  45679999999999999998766522      1222233333333   23344 99


Q ss_pred             HHHHHHHccCCCCcccccEEEEcCCc
Q 024517          230 ASTVIYLISDGSRYMTGTTIYVDGAQ  255 (266)
Q Consensus       230 a~~~~~l~s~~~~~~~G~~i~~dgG~  255 (266)
                      +..+..++..   ..+|+...+|+|.
T Consensus       222 a~~~v~aiE~---~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  222 AINIVNAIEY---PKNGAIWKVDSGS  244 (261)
T ss_pred             HHHHHHHHhh---ccCCcEEEEecCc
Confidence            9999999965   5899999999996

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6e-39  Score=267.14  Aligned_cols=241  Identities=20%  Similarity=0.260  Sum_probs=203.3

Q ss_pred             CCCCCcEEEEecCCC--chHHHHHHHHHHcCCeEEEEecc------------cccHHHHHHHhcccCCCCCeEEEEEecC
Q 024517            1 MENQAKRVLLTSDGD--EISKNIAFHLAKRGCRLVLVGNE------------RRLSSVAEKMMGSLKGGQPVEVVGLDME   66 (266)
Q Consensus         1 m~l~~k~vlItGa~~--giG~~ia~~l~~~g~~v~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~D~~   66 (266)
                      |++++|++|||||++  |||.+++++|+++|++|+++++.            +......+.+...   +.++.++.+|++
T Consensus         1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~   77 (256)
T PRK12748          1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY---GVRCEHMEIDLS   77 (256)
T ss_pred             CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc---CCeEEEEECCCC
Confidence            788999999999994  99999999999999999998843            1111123333221   357899999999


Q ss_pred             CCchHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEe
Q 024517           67 EDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLT  146 (266)
Q Consensus        67 ~~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~is  146 (266)
                      +.+  ++.++++++.+.++++|++|||||.. ...++.+.+.++++..+++|+.+++.+.+++.+.|.+.. .+++|++|
T Consensus        78 ~~~--~~~~~~~~~~~~~g~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~s  153 (256)
T PRK12748         78 QPY--APNRVFYAVSERLGDPSILINNAAYS-THTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA-GGRIINLT  153 (256)
T ss_pred             CHH--HHHHHHHHHHHhCCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC-CeEEEEEC
Confidence            998  99999999999999999999999984 456777888999999999999999999999999997655 58999999


Q ss_pred             cccccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCCh
Q 024517          147 SIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVK  226 (266)
Q Consensus       147 s~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (266)
                      |..+..+  .++...|+++|++++.++++++.++...||++++|+||+++|++...     ..........|..++.+|+
T Consensus       154 s~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~-----~~~~~~~~~~~~~~~~~~~  226 (256)
T PRK12748        154 SGQSLGP--MPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE-----ELKHHLVPKFPQGRVGEPV  226 (256)
T ss_pred             CccccCC--CCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh-----hHHHhhhccCCCCCCcCHH
Confidence            9877665  57788999999999999999999999899999999999999987542     2223334456666777776


Q ss_pred             hhHHHHHHHHccCCCCcccccEEEEcCCcc
Q 024517          227 NDLASTVIYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       227 ~dva~~~~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                       |+++.+.+|+++...+++|+.+.+|||++
T Consensus       227 -~~a~~~~~l~~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        227 -DAARLIAFLVSEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             -HHHHHHHHHhCcccccccCCEEEecCCcc
Confidence             99999999999988899999999999975

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-39  Score=265.42  Aligned_cols=244  Identities=23%  Similarity=0.343  Sum_probs=211.4

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++|+++||||+++||+++++.|+++|++|++++ +.+++++..++++..   +.++.++.+|+++.+  +++++++++.
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~~~~~~~~~~   79 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA---GGRAHAIAADLADPA--SVQRFFDAAA   79 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEccCCCHH--HHHHHHHHHH
Confidence            5689999999999999999999999999999988 666666666666433   357899999999988  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.++++|++|||+|.. ...++.+.+.++++..++.|+.+++.+++.+.|+|.+++ .|++|++||..+..+  .+....
T Consensus        80 ~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~~  155 (250)
T PRK12939         80 AALGGLDGLVNNAGIT-NSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSG-RGRIVNLASDTALWG--APKLGA  155 (250)
T ss_pred             HHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEECchhhccC--CCCcch
Confidence            9999999999999984 446677889999999999999999999999999998766 689999999887766  577889


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCC
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS  241 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  241 (266)
                      |+++|++++.+++.++.++..++|+++.|.||+++|++..... .......+....|..++.+++ |+++.+++++++..
T Consensus       156 y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~  233 (250)
T PRK12939        156 YVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVP-ADERHAYYLKGRALERLQVPD-DVAGAVLFLLSDAA  233 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccC-ChHHHHHHHhcCCCCCCCCHH-HHHHHHHHHhCccc
Confidence            9999999999999999999989999999999999999876532 223444455667777888887 99999999999888


Q ss_pred             CcccccEEEEcCCccc
Q 024517          242 RYMTGTTIYVDGAQSI  257 (266)
Q Consensus       242 ~~~~G~~i~~dgG~~~  257 (266)
                      ++++|+.|.+|||..+
T Consensus       234 ~~~~G~~i~~~gg~~~  249 (250)
T PRK12939        234 RFVTGQLLPVNGGFVM  249 (250)
T ss_pred             cCccCcEEEECCCccc
Confidence            8999999999999754

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=5.6e-39  Score=264.15  Aligned_cols=231  Identities=23%  Similarity=0.339  Sum_probs=190.8

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++|++|||||++|||++++++|+++|++|+++. +. +..+++.++        ..+.++.+|+++.+  ++.+.++  
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~--------~~~~~~~~D~~~~~--~~~~~~~--   71 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQE--------TGATAVQTDSADRD--AVIDVVR--   71 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH--------hCCeEEecCCCCHH--HHHHHHH--
Confidence            6899999999999999999999999999998876 32 223322222        13467889999987  7776664  


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                        .++++|++|||+|.. ...+..+.+.++|+.++++|+.+++.+++.+.++|.+   .+++|++||..+.... .++..
T Consensus        72 --~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~-~~~~~  144 (237)
T PRK12742         72 --KSGALDILVVNAGIA-VFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE---GGRIIIIGSVNGDRMP-VAGMA  144 (237)
T ss_pred             --HhCCCcEEEECCCCC-CCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc---CCeEEEEeccccccCC-CCCCc
Confidence              357899999999984 4455667888999999999999999999999999864   5899999998774322 57888


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.+++.++.+++++|||||+|+||+++|++.....   ...+......|++++.+|+ |+++.+.||+++.
T Consensus       145 ~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~---~~~~~~~~~~~~~~~~~p~-~~a~~~~~l~s~~  220 (237)
T PRK12742        145 AYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANG---PMKDMMHSFMAIKRHGRPE-EVAGMVAWLAGPE  220 (237)
T ss_pred             chHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc---HHHHHHHhcCCCCCCCCHH-HHHHHHHHHcCcc
Confidence            99999999999999999999999999999999999999865421   1223344567888988887 9999999999999


Q ss_pred             CCcccccEEEEcCCcc
Q 024517          241 SRYMTGTTIYVDGAQS  256 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~  256 (266)
                      +.+++|+.+.+|||++
T Consensus       221 ~~~~~G~~~~~dgg~~  236 (237)
T PRK12742        221 ASFVTGAMHTIDGAFG  236 (237)
T ss_pred             cCcccCCEEEeCCCcC
Confidence            9999999999999964

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.7e-39  Score=293.24  Aligned_cols=249  Identities=25%  Similarity=0.375  Sum_probs=212.0

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |+.++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++      +.++.++.+|+++++  ++++++++
T Consensus         1 ~~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~--~~~~~~~~   72 (520)
T PRK06484          1 SKAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL------GPDHHALAMDVSDEA--QIREGFEQ   72 (520)
T ss_pred             CCCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCceeEEEeccCCHH--HHHHHHHH
Confidence            677899999999999999999999999999999998 555555555444      246788999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCC-CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           80 ACQILGNLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      +.+.++++|++|||||+..+ ..++.+.+.++|+.++++|+.+++.++++++|+|.+++.+++||++||..+..+  .+.
T Consensus        73 ~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~--~~~  150 (520)
T PRK06484         73 LHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVA--LPK  150 (520)
T ss_pred             HHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCC--CCC
Confidence            99999999999999997432 356778899999999999999999999999999987653459999999988776  578


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHH-HHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQER-AVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      ...|+++|+++++|+++++.|+.+.||||+.|+||+|+|++......... .........|.+++.+|+ |+++.+.+|+
T Consensus       151 ~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~v~~l~  229 (520)
T PRK06484        151 RTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPE-EIAEAVFFLA  229 (520)
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHH-HHHHHHHHHh
Confidence            89999999999999999999999999999999999999998754322111 122334556777888887 9999999999


Q ss_pred             cCCCCcccccEEEEcCCccccCC
Q 024517          238 SDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       238 s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                      ++...+++|+.+.+|||.....+
T Consensus       230 ~~~~~~~~G~~~~~~gg~~~~~~  252 (520)
T PRK06484        230 SDQASYITGSTLVVDGGWTVYGG  252 (520)
T ss_pred             CccccCccCceEEecCCeecccc
Confidence            99889999999999999875543

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=5.2e-39  Score=264.74  Aligned_cols=235  Identities=22%  Similarity=0.310  Sum_probs=200.7

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEe-c-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGCRLVLVG-N-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~~v~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      +|||||++|||+++|++|+++|++|++++ + .+..++..+++...   +.++.++.+|+++.+  +++++++++.+.++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~--~~~~~~~~~~~~~~   75 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ---GGNARLLQFDVADRV--ACRTLLEADIAEHG   75 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc---CCeEEEEEccCCCHH--HHHHHHHHHHHHcC
Confidence            58999999999999999999999999887 3 34455555555443   357899999999999  99999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHH-HhccCCCCeEEEEecccccccCCCCCchhhHH
Q 024517           86 NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR-MKESKAGGSIVFLTSIIGAERGLYPGAAAYGA  164 (266)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~  164 (266)
                      ++|++|||+|.. ...++.+.+.++|+.++++|+.+++.+.+.+++. +.+++ .++||++||..+..+  .++...|++
T Consensus        76 ~i~~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~~~~~--~~~~~~Y~~  151 (239)
T TIGR01831        76 AYYGVVLNAGIT-RDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIITLASVSGVMG--NRGQVNYSA  151 (239)
T ss_pred             CCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEEEcchhhccC--CCCCcchHH
Confidence            999999999984 4456667889999999999999999999988644 44444 689999999988877  578899999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCcc
Q 024517          165 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM  244 (266)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  244 (266)
                      +|++++.++++++.|+.++||++|+|+||+++|++.....  + .........|+++..+|+ |+++.++||+++.+.++
T Consensus       152 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~-~~~~~~~~~~~~~~~~~~-~va~~~~~l~~~~~~~~  227 (239)
T TIGR01831       152 AKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVE--H-DLDEALKTVPMNRMGQPA-EVASLAGFLMSDGASYV  227 (239)
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhh--H-HHHHHHhcCCCCCCCCHH-HHHHHHHHHcCchhcCc
Confidence            9999999999999999999999999999999999876532  1 223344568889999888 99999999999999999


Q ss_pred             cccEEEEcCCc
Q 024517          245 TGTTIYVDGAQ  255 (266)
Q Consensus       245 ~G~~i~~dgG~  255 (266)
                      +|+.+.+|||.
T Consensus       228 ~g~~~~~~gg~  238 (239)
T TIGR01831       228 TRQVISVNGGM  238 (239)
T ss_pred             cCCEEEecCCc
Confidence            99999999995

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=1.2e-38  Score=263.36  Aligned_cols=242  Identities=24%  Similarity=0.369  Sum_probs=206.2

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||+++||++++++|+++|+.|++.+ +.+++++....+      +.++.++.+|+++.+  ++++++++
T Consensus         2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~--~~~~~~~~   73 (245)
T PRK12936          2 FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL------GERVKIFPANLSDRD--EVKALGQK   73 (245)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh------CCceEEEEccCCCHH--HHHHHHHH
Confidence            467899999999999999999999999999988887 555555544333      246788999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||+|.. ...++.+.+.++|+.++++|+.+++.+++.+.+.+.+++ .+++|++||..+..+  .+..
T Consensus        74 ~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~--~~~~  149 (245)
T PRK12936         74 AEADLEGVDILVNNAGIT-KDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-YGRIINITSVVGVTG--NPGQ  149 (245)
T ss_pred             HHHHcCCCCEEEECCCCC-CCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEECCHHhCcC--CCCC
Confidence            999999999999999984 445667788899999999999999999999999887655 689999999888776  5778


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|+++..+++.++.++...|+++++|+||+++|++....  .+..........|..++.+++ |+++.+.+|++.
T Consensus       150 ~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~ia~~~~~l~~~  226 (245)
T PRK12936        150 ANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKL--NDKQKEAIMGAIPMKRMGTGA-EVASAVAYLASS  226 (245)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhccc--ChHHHHHHhcCCCCCCCcCHH-HHHHHHHHHcCc
Confidence            89999999999999999999998999999999999999876543  222233344567788888887 999999999998


Q ss_pred             CCCcccccEEEEcCCccc
Q 024517          240 GSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~  257 (266)
                      ...+++|+.+.+|||..+
T Consensus       227 ~~~~~~G~~~~~~~g~~~  244 (245)
T PRK12936        227 EAAYVTGQTIHVNGGMAM  244 (245)
T ss_pred             cccCcCCCEEEECCCccc
Confidence            888999999999999754

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-38  Score=265.46  Aligned_cols=247  Identities=24%  Similarity=0.326  Sum_probs=208.2

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      +++++|++|||||+++||.++|++|+++|++|++++ +.++++...+.+...   +.++.++.+|++|++  ++++++++
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~---~~~~~~~~~Dl~d~~--~i~~~~~~   82 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL---GIDALWIAADVADEA--DIERLAEE   82 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEEccCCCHH--HHHHHHHH
Confidence            356899999999999999999999999999999998 555555555555432   357889999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHH-HhccCCCCeEEEEecccccccCC--C
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR-MKESKAGGSIVFLTSIIGAERGL--Y  156 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~g~iv~iss~~~~~~~~--~  156 (266)
                      +.+.++++|++|||+|.. ...++.+.+.++|+..+++|+.+++.+++++.++ |.+++ .+++|++||..+..+..  .
T Consensus        83 ~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-~~~~v~~sS~~~~~~~~~~~  160 (259)
T PRK08213         83 TLERFGHVDILVNNAGAT-WGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-YGRIINVASVAGLGGNPPEV  160 (259)
T ss_pred             HHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCCccc
Confidence            999999999999999973 4456677888999999999999999999999998 76554 58999999987665421  1


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      ++...|+++|++++.+++++++++.++||+++.|+||+++|++.....  +...+.+....|..++++++ |+++.+.+|
T Consensus       161 ~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~va~~~~~l  237 (259)
T PRK08213        161 MDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTL--ERLGEDLLAHTPLGRLGDDE-DLKGAALLL  237 (259)
T ss_pred             cCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhh--HHHHHHHHhcCCCCCCcCHH-HHHHHHHHH
Confidence            345899999999999999999999999999999999999998765432  22333455677888888887 999999999


Q ss_pred             ccCCCCcccccEEEEcCCccc
Q 024517          237 ISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +++.+.+++|+.+.+|||.++
T Consensus       238 ~~~~~~~~~G~~~~~~~~~~~  258 (259)
T PRK08213        238 ASDASKHITGQILAVDGGVSA  258 (259)
T ss_pred             hCccccCccCCEEEECCCeec
Confidence            999999999999999999764

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-38  Score=267.22  Aligned_cols=250  Identities=28%  Similarity=0.421  Sum_probs=213.1

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||+++||++++++|+++|++|++++ +.++.++..+++..... +.++.++.+|+++++  ++++++++
T Consensus         3 ~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~--~~~~~~~~   79 (276)
T PRK05875          3 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKG-AGAVRYEPADVTDED--QVARAVDA   79 (276)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccC-CCceEEEEcCCCCHH--HHHHHHHH
Confidence            456899999999999999999999999999999998 55555555555543211 257889999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||+|......++.+.+.++++.++++|+.+++.+++.+.+.|.+++ .++|+++||..+..+  .+..
T Consensus        80 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~sS~~~~~~--~~~~  156 (276)
T PRK05875         80 ATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG-GGSFVGISSIAASNT--HRWF  156 (276)
T ss_pred             HHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhcCC--CCCC
Confidence            9999999999999999754446677788899999999999999999999999998765 689999999887665  4778


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      .+|+++|++++.+++.++.++...+||++.|.||+++|++..................|..++++++ |+++++.+|++.
T Consensus       157 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~  235 (276)
T PRK05875        157 GAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVE-DVANLAMFLLSD  235 (276)
T ss_pred             cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHH-HHHHHHHHHcCc
Confidence            8999999999999999999999999999999999999998765433333333444567778888887 999999999998


Q ss_pred             CCCcccccEEEEcCCccc
Q 024517          240 GSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~  257 (266)
                      ...+++|+.+.+|||..+
T Consensus       236 ~~~~~~g~~~~~~~g~~~  253 (276)
T PRK05875        236 AASWITGQVINVDGGHML  253 (276)
T ss_pred             hhcCcCCCEEEECCCeec
Confidence            888999999999999876

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.6e-39  Score=268.34  Aligned_cols=239  Identities=18%  Similarity=0.224  Sum_probs=199.3

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccc-------cHHHHHHHhcccCCCCCeEEEEEecCCCchHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERR-------LSSVAEKMMGSLKGGQPVEVVGLDMEEDREGA   72 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   72 (266)
                      |.+++|++|||||++|||+++|++|+++|++|++++ +.+.       +++..+++...   +.++.++.+|+++++  +
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~D~~~~~--~   76 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA---GGQALPLVGDVRDED--Q   76 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc---CCceEEEEecCCCHH--H
Confidence            668899999999999999999999999999999998 4332       33444444432   457899999999999  9


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccc
Q 024517           73 FDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAE  152 (266)
Q Consensus        73 v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~  152 (266)
                      +.++++++.+.++++|++|||||. ....++.+.+.++|+.++++|+.+++.+++++.|+|.+++ +++|+++||..+..
T Consensus        77 i~~~~~~~~~~~g~id~li~~ag~-~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~  154 (273)
T PRK08278         77 VAAAVAKAVERFGGIDICVNNASA-INLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE-NPHILTLSPPLNLD  154 (273)
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCC-cCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC-CCEEEEECCchhcc
Confidence            999999999999999999999997 3446677889999999999999999999999999998765 68999999987765


Q ss_pred             cCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecC-cccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHH
Q 024517          153 RGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG-LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAS  231 (266)
Q Consensus       153 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  231 (266)
                      +...+++..|+++|++++.|+++++.|+.++||+||+|+|| .++|++......         ...+..++.+|+ ++|+
T Consensus       155 ~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~---------~~~~~~~~~~p~-~va~  224 (273)
T PRK08278        155 PKWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLG---------GDEAMRRSRTPE-IMAD  224 (273)
T ss_pred             ccccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhccc---------ccccccccCCHH-HHHH
Confidence            52227788999999999999999999999999999999999 688876443211         122445667777 9999


Q ss_pred             HHHHHccCCCCcccccEEEEcCCccc
Q 024517          232 TVIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       232 ~~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      .+++++++...+++|+++ +|++...
T Consensus       225 ~~~~l~~~~~~~~~G~~~-~~~~~~~  249 (273)
T PRK08278        225 AAYEILSRPAREFTGNFL-IDEEVLR  249 (273)
T ss_pred             HHHHHhcCccccceeEEE-eccchhh
Confidence            999999988889999988 6776543

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=8e-39  Score=266.42  Aligned_cols=238  Identities=19%  Similarity=0.234  Sum_probs=197.0

Q ss_pred             EEEEecCCCchHHHHHHHHHH----cCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAK----RGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~----~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++|||||++|||+++|++|++    +|++|++++ +.+++++..+++....+ +.++.++.+|+++.+  +++++++++.
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~-~~~v~~~~~Dl~~~~--~v~~~~~~~~   78 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERS-GLRVVRVSLDLGAEA--GLEQLLKALR   78 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCC-CceEEEEEeccCCHH--HHHHHHHHHH
Confidence            689999999999999999997    799999999 66777777777764322 357889999999999  9999999998


Q ss_pred             HHhCCC----CEEEEcCCCCCCCCC-CCC-CCHHHHHHHHHccchHHHHHHHHHHHHHhccC-CCCeEEEEecccccccC
Q 024517           82 QILGNL----DAFVHCYTYEGKMQD-PLQ-VGEDEFKKLVKINFVAPWFLLKAVGRRMKESK-AGGSIVFLTSIIGAERG  154 (266)
Q Consensus        82 ~~~g~i----d~li~~ag~~~~~~~-~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~iv~iss~~~~~~~  154 (266)
                      +.++.+    |++|||||......+ ..+ .+.++|+.++++|+.+++.+++.++|.|.+++ ..++||++||..+..+ 
T Consensus        79 ~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~-  157 (256)
T TIGR01500        79 ELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQP-  157 (256)
T ss_pred             hccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCC-
Confidence            877653    699999997433322 222 35689999999999999999999999998652 2479999999988766 


Q ss_pred             CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc---cHHHHHHHhhccCCCCCCCChhhHHH
Q 024517          155 LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---QERAVKLVREAAPLHRWLDVKNDLAS  231 (266)
Q Consensus       155 ~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dva~  231 (266)
                       .++...|+++|++++.|+++++.|+.+.||+||+|+||+|+|++......   +++....+....|.+++.+|+ |+|+
T Consensus       158 -~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-eva~  235 (256)
T TIGR01500       158 -FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPK-VSAQ  235 (256)
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHH-HHHH
Confidence             68889999999999999999999999999999999999999998754211   223344455677889999998 9999


Q ss_pred             HHHHHccCCCCcccccEEEE
Q 024517          232 TVIYLISDGSRYMTGTTIYV  251 (266)
Q Consensus       232 ~~~~l~s~~~~~~~G~~i~~  251 (266)
                      .+++|++ ..+++||+.+.+
T Consensus       236 ~~~~l~~-~~~~~~G~~~~~  254 (256)
T TIGR01500       236 KLLSLLE-KDKFKSGAHVDY  254 (256)
T ss_pred             HHHHHHh-cCCcCCcceeec
Confidence            9999997 468999998864

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-38  Score=262.80  Aligned_cols=246  Identities=25%  Similarity=0.332  Sum_probs=210.3

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|+++||||+++||++++++|+++|++|++++ +.+..++..+.+.    .+.++.++.+|++|++  ++++++++
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~--~~~~~~~~   74 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA----AGGRAFARQGDVGSAE--AVEALVDF   74 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh----cCCeEEEEEcCCCCHH--HHHHHHHH
Confidence            889999999999999999999999999999999998 5555555555553    1357899999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||+|.. ...++.+.+.++++..+++|+.+++.+++.+++.|++++ .++|+++||..+..+  .+..
T Consensus        75 i~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~--~~~~  150 (252)
T PRK06138         75 VAARWGRLDVLVNNAGFG-CGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALAG--GRGR  150 (252)
T ss_pred             HHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhccC--CCCc
Confidence            999999999999999984 445667788999999999999999999999999998766 689999999988766  5778


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----cHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      ..|+++|++++.+++.++.++..+||++++|+||.+.|++......    ............|..++.+++ |+++.+.+
T Consensus       151 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~a~~~~~  229 (252)
T PRK06138        151 AAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAE-EVAQAALF  229 (252)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHH-HHHHHHHH
Confidence            9999999999999999999999899999999999999998654321    222223333455666677777 99999999


Q ss_pred             HccCCCCcccccEEEEcCCccc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      ++++...+++|+.+.+|||.+.
T Consensus       230 l~~~~~~~~~g~~~~~~~g~~~  251 (252)
T PRK06138        230 LASDESSFATGTTLVVDGGWLA  251 (252)
T ss_pred             HcCchhcCccCCEEEECCCeec
Confidence            9998889999999999999764

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=2e-38  Score=262.77  Aligned_cols=244  Identities=24%  Similarity=0.350  Sum_probs=210.4

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++|++|||||+++||++++++|+++|++|++++ +.+..++..+.+...   +.++.++.+|+++.+  +++++++++.
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~--~~~~~~~~~~   75 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK---GGNAQAFACDITDRD--SVDTAVAAAE   75 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc---CCcEEEEEcCCCCHH--HHHHHHHHHH
Confidence            4689999999999999999999999999999998 555555555555433   357889999999998  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.++++|++|||+|. ....++.+.+.++++..+++|+.+++.+.+.+.++|.+.+ .++++++||..+..+  .+....
T Consensus        76 ~~~~~~d~vi~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~~~--~~~~~~  151 (250)
T TIGR03206        76 QALGPVDVLVNNAGW-DKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAARVG--SSGEAV  151 (250)
T ss_pred             HHcCCCCEEEECCCC-CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhccC--CCCCch
Confidence            999999999999998 3556777788899999999999999999999999998765 689999999988766  578899


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----cHHHHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      |+++|++++.++++++.++.+.||+++.|+||.++|++......    +......+....|.++..+++ |+|+++.+|+
T Consensus       152 Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~  230 (250)
T TIGR03206       152 YAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPD-DLPGAILFFS  230 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHH-HHHHHHHHHc
Confidence            99999999999999999998889999999999999997654321    223344556677888888887 9999999999


Q ss_pred             cCCCCcccccEEEEcCCcc
Q 024517          238 SDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       238 s~~~~~~~G~~i~~dgG~~  256 (266)
                      ++...+++|+++.+|||.+
T Consensus       231 ~~~~~~~~g~~~~~~~g~~  249 (250)
T TIGR03206       231 SDDASFITGQVLSVSGGLT  249 (250)
T ss_pred             CcccCCCcCcEEEeCCCcc
Confidence            9988999999999999965

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.6e-39  Score=266.05  Aligned_cols=243  Identities=23%  Similarity=0.380  Sum_probs=192.9

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccc----cHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERR----LSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDE   75 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~   75 (266)
                      |++++|++|||||++|||+++|+.|+++|++|+++. +.++    .++..+++...   +.++.++.+|+++++  ++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~--~~~~   78 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA---GAKAVAFQADLTTAA--AVEK   78 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh---CCcEEEEecCcCCHH--HHHH
Confidence            346889999999999999999999999999977665 4332    23333333322   347889999999999  9999


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEE-ecccccccC
Q 024517           76 AVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFL-TSIIGAERG  154 (266)
Q Consensus        76 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~i-ss~~~~~~~  154 (266)
                      +++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++++.|.|.+   .++++++ ||..+..  
T Consensus        79 ~~~~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~~~iv~~~ss~~~~~--  152 (257)
T PRK12744         79 LFDDAKAAFGRPDIAINTVGKV-LKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND---NGKIVTLVTSLLGAF--  152 (257)
T ss_pred             HHHHHHHhhCCCCEEEECCccc-CCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc---CCCEEEEecchhccc--
Confidence            9999999999999999999984 4466778889999999999999999999999999865   4677776 4544432  


Q ss_pred             CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHH--HHHhhccCCC--CCCCChhhHH
Q 024517          155 LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV--KLVREAAPLH--RWLDVKNDLA  230 (266)
Q Consensus       155 ~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~dva  230 (266)
                       .+.+..|+++|+|++.|+++++.|+.++||+||+|+||++.|+++......+...  .......|..  ++.+++ |++
T Consensus       153 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva  230 (257)
T PRK12744        153 -TPFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIE-DIV  230 (257)
T ss_pred             -CCCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHH-HHH
Confidence             3678899999999999999999999999999999999999999864432221100  1111123333  567776 999


Q ss_pred             HHHHHHccCCCCcccccEEEEcCCccc
Q 024517          231 STVIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +.+.+|+++ ..+++|+.+.+|||..+
T Consensus       231 ~~~~~l~~~-~~~~~g~~~~~~gg~~~  256 (257)
T PRK12744        231 PFIRFLVTD-GWWITGQTILINGGYTT  256 (257)
T ss_pred             HHHHHhhcc-cceeecceEeecCCccC
Confidence            999999986 57999999999999754

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=2.1e-38  Score=265.50  Aligned_cols=243  Identities=28%  Similarity=0.382  Sum_probs=192.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-c-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHH----HHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-N-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAF----DEAVD   78 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v----~~~~~   78 (266)
                      .++++||||++|||++++++|+++|++|++++ + .+.+++..+++....  +.+..++.+|++|.+  ++    +++++
T Consensus         1 ~~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~d~~--~~~~~~~~~~~   76 (267)
T TIGR02685         1 APAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARR--PNSAVTCQADLSNSA--TLFSRCEAIID   76 (267)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhcc--CCceEEEEccCCCch--hhHHHHHHHHH
Confidence            36899999999999999999999999999876 3 345555555554322  246778999999987  55    55666


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCH-----------HHHHHHHHccchHHHHHHHHHHHHHhccC-----CCCeE
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGE-----------DEFKKLVKINFVAPWFLLKAVGRRMKESK-----AGGSI  142 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~g~i  142 (266)
                      ++.+.++++|+||||||...+ .++.+.+.           ++|..++++|+.+++.+++++.|+|....     ..+.|
T Consensus        77 ~~~~~~g~iD~lv~nAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~i  155 (267)
T TIGR02685        77 ACFRAFGRCDVLVNNASAFYP-TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSI  155 (267)
T ss_pred             HHHHccCCceEEEECCccCCC-CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEE
Confidence            666778999999999997433 33333222           46999999999999999999999986431     24689


Q ss_pred             EEEecccccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCC-C
Q 024517          143 VFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH-R  221 (266)
Q Consensus       143 v~iss~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~  221 (266)
                      ++++|..+..+  .+++.+|+++|+++++|+++++.|+.++||+||+|+||++.|+....    ......+....|+. +
T Consensus       156 v~~~s~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~----~~~~~~~~~~~~~~~~  229 (267)
T TIGR02685       156 VNLCDAMTDQP--LLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP----FEVQEDYRRKVPLGQR  229 (267)
T ss_pred             EEehhhhccCC--CcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc----hhHHHHHHHhCCCCcC
Confidence            99999887665  57889999999999999999999999999999999999998763321    12223333455665 5


Q ss_pred             CCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccC
Q 024517          222 WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       222 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      ..+|+ |+++.+++|+++...+++|+.+.+|||+++++
T Consensus       230 ~~~~~-~va~~~~~l~~~~~~~~~G~~~~v~gg~~~~~  266 (267)
T TIGR02685       230 EASAE-QIADVVIFLVSPKAKYITGTCIKVDGGLSLTR  266 (267)
T ss_pred             CCCHH-HHHHHHHHHhCcccCCcccceEEECCceeccC
Confidence            67776 99999999999989999999999999998875

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=3.6e-38  Score=262.29  Aligned_cols=243  Identities=23%  Similarity=0.386  Sum_probs=200.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++|++|||||++|||+++|+.|+++|++|++++ +.++.++..+++....+ +..+.++.+|++|++  ++.++++++.
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~d~~--~~~~~~~~~~   78 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFK-SKKLSLVELDITDQE--SLEEFLSKSA   78 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcC-CCceeEEEecCCCHH--HHHHHHHHHH
Confidence            4789999999999999999999999999999998 66666667666644322 235667799999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCC--CCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC----
Q 024517           82 QILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL----  155 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~----  155 (266)
                      +.++++|++||||+...  ...++.+.+.++++..+++|+.+++.+++.++|.|++++ .++||++||..+..+..    
T Consensus        79 ~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~  157 (256)
T PRK09186         79 EKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPKFEIY  157 (256)
T ss_pred             HHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechhhhccccchhc
Confidence            99999999999997532  234677888999999999999999999999999998766 58999999987654310    


Q ss_pred             ----CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHH
Q 024517          156 ----YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAS  231 (266)
Q Consensus       156 ----~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  231 (266)
                          ......|+++|++++.|+++++.++.++||++|.|+||.+.++..      ......+....+..++.+|+ |+|+
T Consensus       158 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~------~~~~~~~~~~~~~~~~~~~~-dva~  230 (256)
T PRK09186        158 EGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP------EAFLNAYKKCCNGKGMLDPD-DICG  230 (256)
T ss_pred             cccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC------HHHHHHHHhcCCccCCCCHH-Hhhh
Confidence                112247999999999999999999999999999999999987642      12223333445666778887 9999


Q ss_pred             HHHHHccCCCCcccccEEEEcCCcc
Q 024517          232 TVIYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       232 ~~~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      .+++++++...+++|+.+.+|||++
T Consensus       231 ~~~~l~~~~~~~~~g~~~~~~~g~~  255 (256)
T PRK09186        231 TLVFLLSDQSKYITGQNIIVDDGFS  255 (256)
T ss_pred             hHhheeccccccccCceEEecCCcc
Confidence            9999999888899999999999975

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.3e-38  Score=261.68  Aligned_cols=242  Identities=22%  Similarity=0.349  Sum_probs=204.0

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEe-c-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGCRLVLVG-N-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~~v~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      ++||||++|||+++++.|+++|++|++++ + .+.++++.+++..... ...+..+.+|+++.+  +++++++++.+.++
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~--~~~~~~~~~~~~~~   78 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHG-EGVAFAAVQDVTDEA--QWQALLAQAADAMG   78 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCC-CceEEEEEeecCCHH--HHHHHHHHHHHHcC
Confidence            79999999999999999999999999999 4 4555556555543321 124566889999999  99999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHHh
Q 024517           86 NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGAC  165 (266)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~s  165 (266)
                      ++|++|||+|.. ...++.+.+.++++.++++|+.+++.+++.++|.|.+.+ .++|+++||..+..+  .++...|+++
T Consensus        79 ~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~~~--~~~~~~Y~~s  154 (251)
T PRK07069         79 GLSVLVNNAGVG-SFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAFKA--EPDYTAYNAS  154 (251)
T ss_pred             CccEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhccC--CCCCchhHHH
Confidence            999999999983 446677788999999999999999999999999998765 689999999988766  5788999999


Q ss_pred             HHHHHHHHHHHHHHhCCCC--cEEEEEecCcccCCCccccc---ccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          166 AASIHQLVRTAAMEIGKHK--IRVNGIARGLHLQDEYPIAV---GQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       166 K~a~~~~~~~la~e~~~~~--i~v~~v~pG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      |++++.|+++++.|+.+.+  |+++.|+||+++|++.....   ..++.........|..++.+|+ |+++.+++|+++.
T Consensus       155 K~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~~~~  233 (251)
T PRK07069        155 KAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPD-DVAHAVLYLASDE  233 (251)
T ss_pred             HHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHH-HHHHHHHHHcCcc
Confidence            9999999999999997664  99999999999999875422   1233334445567778888887 9999999999988


Q ss_pred             CCcccccEEEEcCCccc
Q 024517          241 SRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~  257 (266)
                      ..+++|+.+.+|||.+.
T Consensus       234 ~~~~~g~~i~~~~g~~~  250 (251)
T PRK07069        234 SRFVTGAELVIDGGICA  250 (251)
T ss_pred             ccCccCCEEEECCCeec
Confidence            89999999999999765

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-38  Score=262.80  Aligned_cols=241  Identities=20%  Similarity=0.288  Sum_probs=201.5

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++|+++||||++|||++++++|+++|++|++++ +..+.++..+++        ...++.+|+++.+  +++++++++.
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~--------~~~~~~~D~~~~~--~~~~~~~~~~   74 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV--------GGLFVPTDVTDED--AVNALFDTAA   74 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc--------CCcEEEeeCCCHH--HHHHHHHHHH
Confidence            6799999999999999999999999999999998 444444443333        1257889999998  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCC-CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           82 QILGNLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      +.++++|++|||+|...+ ..++.+.+.++|+..+++|+.+++.+++.++|+|.+++ .++||++||..+..+. .++..
T Consensus        75 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~~~~g~-~~~~~  152 (255)
T PRK06057         75 ETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAVMGS-ATSQI  152 (255)
T ss_pred             HHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchhhccCC-CCCCc
Confidence            989999999999997533 24566788899999999999999999999999998765 6899999998776552 24677


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-cHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-QERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      .|+++|++++.+++.++.++.++||+++.|+||+++|++...... ......+.....|.+++.+|+ |+++.+.+|+++
T Consensus       153 ~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~l~~~  231 (255)
T PRK06057        153 SYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPE-EIAAAVAFLASD  231 (255)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCc
Confidence            899999999999999999999999999999999999998765432 122222233456778888887 999999999999


Q ss_pred             CCCcccccEEEEcCCcc
Q 024517          240 GSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~  256 (266)
                      ...+++|+++.+|||..
T Consensus       232 ~~~~~~g~~~~~~~g~~  248 (255)
T PRK06057        232 DASFITASTFLVDGGIS  248 (255)
T ss_pred             cccCccCcEEEECCCee
Confidence            89999999999999975

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-38  Score=260.41  Aligned_cols=243  Identities=23%  Similarity=0.334  Sum_probs=200.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-c-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-N-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|++|||||++|||.++++.|+++|++|+++. + .+..++..+++...   +.++.++.||+++.+  +++++++++.+
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~~~~~~~~~~~   76 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA---GGRACVVAGDVANEA--DVIAMFDAVQS   76 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCcEEEEEeccCCHH--HHHHHHHHHHH
Confidence            47899999999999999999999999998765 3 34455555555432   357899999999999  99999999998


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC--CCCeEEEEecccccccCCCCCch
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK--AGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .++++|++|||||......++.+.+.++++.++++|+.+++.+++.+++.|..++  ..+++|++||..+..+. ...+.
T Consensus        77 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~-~~~~~  155 (248)
T PRK06947         77 AFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGS-PNEYV  155 (248)
T ss_pred             hcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCC-CCCCc
Confidence            8999999999999854445677788999999999999999999999999986542  14789999998877653 12356


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.|+++++.++.+.||+|+.|.||+++|++.... .............|.++..+++ |+++.+++++++.
T Consensus       156 ~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~e-~va~~~~~l~~~~  233 (248)
T PRK06947        156 DYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASG-GQPGRAARLGAQTPLGRAGEAD-EVAETIVWLLSDA  233 (248)
T ss_pred             ccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccccccc-CCHHHHHHHhhcCCCCCCcCHH-HHHHHHHHHcCcc
Confidence            8999999999999999999998999999999999999986432 1122223334566777777776 9999999999998


Q ss_pred             CCcccccEEEEcCCc
Q 024517          241 SRYMTGTTIYVDGAQ  255 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~  255 (266)
                      ..+++|+.|.+|||.
T Consensus       234 ~~~~~G~~~~~~gg~  248 (248)
T PRK06947        234 ASYVTGALLDVGGGR  248 (248)
T ss_pred             ccCcCCceEeeCCCC
Confidence            899999999999984

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.6e-38  Score=269.74  Aligned_cols=241  Identities=21%  Similarity=0.267  Sum_probs=197.9

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-c-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-N-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      +++++|++|||||++|||+++|++|+++|++|++++ + .+..++..+++...   +.++.++.+|+++.+  +++++++
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~---g~~~~~~~~Dv~d~~--~~~~~~~   82 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA---GAKAVAVAGDISQRA--TADELVA   82 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc---CCeEEEEeCCCCCHH--HHHHHHH
Confidence            357899999999999999999999999999999988 3 34456666666543   457889999999998  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC------CCCeEEEEecccccc
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK------AGGSIVFLTSIIGAE  152 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~g~iv~iss~~~~~  152 (266)
                      ++.+ +|++|++|||||.. ....+.+.+.++|+..+++|+.+++.+++++.++|.++.      ..|+||++||..+..
T Consensus        83 ~~~~-~g~iD~li~nAG~~-~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  160 (306)
T PRK07792         83 TAVG-LGGLDIVVNNAGIT-RDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV  160 (306)
T ss_pred             HHHH-hCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc
Confidence            9998 99999999999984 445677889999999999999999999999999987531      137999999998876


Q ss_pred             cCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHH
Q 024517          153 RGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAST  232 (266)
Q Consensus       153 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  232 (266)
                      +  .++...|+++|++++.|++.++.|+.++||+||+|+||. .|++........... .....    ...+|+ |++..
T Consensus       161 ~--~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~~~-~~~~~----~~~~pe-~va~~  231 (306)
T PRK07792        161 G--PVGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAPDV-EAGGI----DPLSPE-HVVPL  231 (306)
T ss_pred             C--CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccchh-hhhcc----CCCCHH-HHHHH
Confidence            6  477889999999999999999999999999999999994 888754322110000 00011    123455 99999


Q ss_pred             HHHHccCCCCcccccEEEEcCCccc
Q 024517          233 VIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       233 ~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +.||+++...+++|+.+.+|||...
T Consensus       232 v~~L~s~~~~~~tG~~~~v~gg~~~  256 (306)
T PRK07792        232 VQFLASPAAAEVNGQVFIVYGPMVT  256 (306)
T ss_pred             HHHHcCccccCCCCCEEEEcCCeEE
Confidence            9999998888999999999999755

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-38  Score=269.27  Aligned_cols=234  Identities=23%  Similarity=0.299  Sum_probs=198.4

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.++++++.+++..    +.++..+.+|++|.+  +++++++++
T Consensus         6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~----~~~~~~~~~Dv~d~~--~v~~~~~~~   79 (296)
T PRK05872          6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG----DDRVLTVVADVTDLA--AMQAAAEEA   79 (296)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC----CCcEEEEEecCCCHH--HHHHHHHHH
Confidence            46799999999999999999999999999999999 66666666655531    246777889999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||||.. ...++.+.+.++|++++++|+.+++++++.++|+|.+.  .|+||++||..+..+  .+...
T Consensus        80 ~~~~g~id~vI~nAG~~-~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~--~~~~~  154 (296)
T PRK05872         80 VERFGGIDVVVANAGIA-SGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER--RGYVLQVSSLAAFAA--APGMA  154 (296)
T ss_pred             HHHcCCCCEEEECCCcC-CCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEEeCHhhcCC--CCCch
Confidence            99999999999999984 45778889999999999999999999999999999764  489999999988776  58889


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhc--cCCCCCCCChhhHHHHHHHHcc
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA--APLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      .|+++|++++.|+++++.|+.++||++|+|+||+++|++.............+...  .|.++..+++ |+++.+.++++
T Consensus       155 ~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~va~~i~~~~~  233 (296)
T PRK05872        155 AYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVE-KCAAAFVDGIE  233 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHH-HHHHHHHHHHh
Confidence            99999999999999999999999999999999999999876543332222223333  3566777776 99999999999


Q ss_pred             CCCCccccc
Q 024517          239 DGSRYMTGT  247 (266)
Q Consensus       239 ~~~~~~~G~  247 (266)
                      ....+++|.
T Consensus       234 ~~~~~i~~~  242 (296)
T PRK05872        234 RRARRVYAP  242 (296)
T ss_pred             cCCCEEEch
Confidence            887777775

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-38  Score=258.67  Aligned_cols=241  Identities=23%  Similarity=0.320  Sum_probs=201.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +|++|||||+++||.+++++|+++|++|+++. +. +..++..+.+...   +.++.++.+|+++.+  +++++++++.+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~--~~~~~~~~~~~   76 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ---GGEALAVAADVADEA--DVLRLFEAVDR   76 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC---CCcEEEEEeccCCHH--HHHHHHHHHHH
Confidence            57999999999999999999999999998876 43 3344444444322   356889999999998  99999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC--CCCeEEEEecccccccCCCCC-c
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK--AGGSIVFLTSIIGAERGLYPG-A  159 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~g~iv~iss~~~~~~~~~~~-~  159 (266)
                      .++++|++|||+|......++.+.+.++|+.++++|+.+++.+++.++++|.++.  ++|+|+++||..+..+  .+. .
T Consensus        77 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--~~~~~  154 (248)
T PRK06123         77 ELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLG--SPGEY  154 (248)
T ss_pred             HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCC--CCCCc
Confidence            9999999999999854445677788999999999999999999999999997542  2478999999987766  343 4


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|++.++.++.+.||+++.|+||.+.|++..... ............|+++..+++ |+++.+.++++.
T Consensus       155 ~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~-d~a~~~~~l~~~  232 (248)
T PRK06123        155 IDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG-EPGRVDRVKAGIPMGRGGTAE-EVARAILWLLSD  232 (248)
T ss_pred             cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC-CHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCc
Confidence            679999999999999999999999999999999999999764322 233334455667888888887 999999999998


Q ss_pred             CCCcccccEEEEcCC
Q 024517          240 GSRYMTGTTIYVDGA  254 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG  254 (266)
                      ...+++|+.+.+|||
T Consensus       233 ~~~~~~g~~~~~~gg  247 (248)
T PRK06123        233 EASYTTGTFIDVSGG  247 (248)
T ss_pred             cccCccCCEEeecCC
Confidence            788999999999987

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.2e-37  Score=257.33  Aligned_cols=240  Identities=20%  Similarity=0.250  Sum_probs=203.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEecccc--cHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERR--LSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      |++|||||+++||+++|++|+++|++|+++++...  .++.......   .+.++.++.+|+++.+  +++++++++.+.
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~--~v~~~~~~~~~~   77 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF---TEDQVRLKELDVTDTE--ECAEALAEIEEE   77 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc---cCCeEEEEEcCCCCHH--HHHHHHHHHHHH
Confidence            68999999999999999999999999999984322  2222222211   1357899999999998  999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhH
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG  163 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~  163 (266)
                      ++++|++|||+|.. ...++.+.+.++|+.++++|+.+++.+++.++|.|.+.+ .+++|++||..+..+  .++...|+
T Consensus        78 ~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~--~~~~~~Y~  153 (245)
T PRK12824         78 EGPVDILVNNAGIT-RDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGLKG--QFGQTNYS  153 (245)
T ss_pred             cCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhccC--CCCChHHH
Confidence            99999999999984 446677888999999999999999999999999998766 689999999988765  57889999


Q ss_pred             HhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCc
Q 024517          164 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY  243 (266)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  243 (266)
                      ++|++++.|++.++.++.++||+++.|.||+++|++....  .+.....+....|.+++.+++ |+++.+.+|+++...+
T Consensus       154 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~~~~~~~  230 (245)
T PRK12824        154 AAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQM--GPEVLQSIVNQIPMKRLGTPE-EIAAAVAFLVSEAAGF  230 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhc--CHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHcCccccC
Confidence            9999999999999999999999999999999999987543  233444555667777778887 9999999999888889


Q ss_pred             ccccEEEEcCCccc
Q 024517          244 MTGTTIYVDGAQSI  257 (266)
Q Consensus       244 ~~G~~i~~dgG~~~  257 (266)
                      ++|+.+.+|||..+
T Consensus       231 ~~G~~~~~~~g~~~  244 (245)
T PRK12824        231 ITGETISINGGLYM  244 (245)
T ss_pred             ccCcEEEECCCeec
Confidence            99999999999754

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-37  Score=256.46  Aligned_cols=245  Identities=25%  Similarity=0.338  Sum_probs=206.2

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |.+++|++|||||+++||++++++|+++|++|++++ +.+..+++.+++...   +.++.++.+|+++.+  ++++++++
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~~~~~~~~   76 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD---GGTAIAVQVDVSDPD--SAKAMADA   76 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEcCCCCHH--HHHHHHHH
Confidence            457899999999999999999999999999999999 444455555555432   246788999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCC--CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCC
Q 024517           80 ACQILGNLDAFVHCYTYEGK--MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP  157 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  157 (266)
                      +.+.++++|++|||||....  ..++.+.+.+++++.+++|+.+++.++++++|+|.+.+ .++||++||..+.     .
T Consensus        77 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~-----~  150 (250)
T PRK07774         77 TVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRG-GGAIVNQSSTAAW-----L  150 (250)
T ss_pred             HHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC-CcEEEEEeccccc-----C
Confidence            99999999999999998532  24566788899999999999999999999999998765 6899999998653     3


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      +...|+++|++++.+++++++++...||+++.++||.++|++..... ............|..++.+++ |+++.+++++
T Consensus       151 ~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-d~a~~~~~~~  228 (250)
T PRK07774        151 YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT-PKEFVADMVKGIPLSRMGTPE-DLVGMCLFLL  228 (250)
T ss_pred             CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccC-CHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHh
Confidence            45789999999999999999999989999999999999999876533 333444555666777777777 9999999999


Q ss_pred             cCCCCcccccEEEEcCCcccc
Q 024517          238 SDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       238 s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      +......+|+.+.+|+|.++.
T Consensus       229 ~~~~~~~~g~~~~v~~g~~~~  249 (250)
T PRK07774        229 SDEASWITGQIFNVDGGQIIR  249 (250)
T ss_pred             ChhhhCcCCCEEEECCCeecc
Confidence            876677899999999998764

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.3e-37  Score=255.13  Aligned_cols=244  Identities=20%  Similarity=0.355  Sum_probs=204.9

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |+++++++|||||+++||.++++.|+++|++|++++ +.+++++..+++...   +.++.++.+|+++.+  +++++++.
T Consensus         1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~   75 (253)
T PRK08217          1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL---GTEVRGYAANVTDEE--DVEATFAQ   75 (253)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEEcCCCCHH--HHHHHHHH
Confidence            788999999999999999999999999999999998 555666666666543   357889999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCC-------CC-CCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQ-------DP-LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGA  151 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~-------~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~  151 (266)
                      +.+.++++|++|||+|......       .+ .+.+.++++.++++|+.+++.+.+.++|.|.+...++.++++||... 
T Consensus        76 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~-  154 (253)
T PRK08217         76 IAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIAR-  154 (253)
T ss_pred             HHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccc-
Confidence            9888899999999999743211       11 56678999999999999999999999999977643688999998743 


Q ss_pred             ccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHH
Q 024517          152 ERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAS  231 (266)
Q Consensus       152 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  231 (266)
                      .+  .++...|+++|++++.++++++.++.++||++++|+||+++|++....  .+.....+....|.+++++++ |+++
T Consensus       155 ~~--~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~a~  229 (253)
T PRK08217        155 AG--NMGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM--KPEALERLEKMIPVGRLGEPE-EIAH  229 (253)
T ss_pred             cC--CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc--CHHHHHHHHhcCCcCCCcCHH-HHHH
Confidence            34  467899999999999999999999998999999999999999987543  234444555667777888887 9999


Q ss_pred             HHHHHccCCCCcccccEEEEcCCccc
Q 024517          232 TVIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       232 ~~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      .+.+|++.  .+++|+++.+|||..+
T Consensus       230 ~~~~l~~~--~~~~g~~~~~~gg~~~  253 (253)
T PRK08217        230 TVRFIIEN--DYVTGRVLEIDGGLRL  253 (253)
T ss_pred             HHHHHHcC--CCcCCcEEEeCCCccC
Confidence            99999964  6899999999999753

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-37  Score=267.13  Aligned_cols=224  Identities=21%  Similarity=0.252  Sum_probs=190.7

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++.+|++|||||++|||++++++|+++|++|++++ +.++++++.+++.+.   +.++.++.+|++|.+  ++++++++
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~---g~~~~~~~~Dv~d~~--~v~~~~~~   77 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL---GAEVLVVPTDVTDAD--QVKALATQ   77 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEeeCCCHH--HHHHHHHH
Confidence            457899999999999999999999999999999999 667777777777643   467889999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||. ....++.+.+.+++++++++|+.+++.+++.++|+|.+++ .|.||+++|..+..+  .+..
T Consensus        78 ~~~~~g~iD~lVnnAG~-~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~~~~--~p~~  153 (330)
T PRK06139         78 AASFGGRIDVWVNNVGV-GAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGGFAA--QPYA  153 (330)
T ss_pred             HHHhcCCCCEEEECCCc-CCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhcCC--CCCc
Confidence            99988999999999998 4557788899999999999999999999999999998876 689999999988766  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCC-CcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKH-KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~-~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ..|+++|+++.+|+++++.|+.+. ||+|+.|+||+++||++.......   .  ....+..+..+|+ ++|+.+++++.
T Consensus       154 ~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~---~--~~~~~~~~~~~pe-~vA~~il~~~~  227 (330)
T PRK06139        154 AAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYT---G--RRLTPPPPVYDPR-RVAKAVVRLAD  227 (330)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccccc---c--ccccCCCCCCCHH-HHHHHHHHHHh
Confidence            999999999999999999999874 899999999999999875421100   0  0112233445666 99999999986


Q ss_pred             C
Q 024517          239 D  239 (266)
Q Consensus       239 ~  239 (266)
                      .
T Consensus       228 ~  228 (330)
T PRK06139        228 R  228 (330)
T ss_pred             C
Confidence            4

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-37  Score=255.68  Aligned_cols=245  Identities=24%  Similarity=0.353  Sum_probs=208.6

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++|++|||||+++||++++++|+++|++|++++ +.++.++..+++...   +.++.++.+|+++.+  +++++++++.
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~~~~~~~~~~   76 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA---GGKAIGVAMDVTDEE--AINAGIDYAV   76 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEcCCCCHH--HHHHHHHHHH
Confidence            5689999999999999999999999999999999 666666666666542   357889999999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.++++|++|||+|.. ...++.+.+.++++.++++|+.+++.+++.+++.|.+++ .++||++||..+..+  .++...
T Consensus        77 ~~~~~~d~vi~~a~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~--~~~~~~  152 (258)
T PRK12429         77 ETFGGVDILVNNAGIQ-HVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGLVG--SAGKAA  152 (258)
T ss_pred             HHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhccC--CCCcch
Confidence            9999999999999974 446677788899999999999999999999999998876 689999999988776  688999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----------cHHHHHHHhhccCCCCCCCChhhHHH
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----------QERAVKLVREAAPLHRWLDVKNDLAS  231 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~dva~  231 (266)
                      |+++|++++.+++.++.++.+.||+++.|+||++.||+......          .......+....+.+++.+++ |+|+
T Consensus       153 y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~a~  231 (258)
T PRK12429        153 YVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVE-EIAD  231 (258)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHH-HHHH
Confidence            99999999999999999999899999999999999988643211          111122333445566778887 9999


Q ss_pred             HHHHHccCCCCcccccEEEEcCCccc
Q 024517          232 TVIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       232 ~~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      .+.+|+++....++|+.+.+|||++.
T Consensus       232 ~~~~l~~~~~~~~~g~~~~~~~g~~~  257 (258)
T PRK12429        232 YALFLASFAAKGVTGQAWVVDGGWTA  257 (258)
T ss_pred             HHHHHcCccccCccCCeEEeCCCEec
Confidence            99999988778899999999999763

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=4.8e-37  Score=254.23  Aligned_cols=240  Identities=21%  Similarity=0.359  Sum_probs=202.1

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-c-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-N-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++|+++||||+++||.+++++|+++|++|+++. + .+..++..+.+...   +.++.++.+|+++++  ++.++++++
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~--~~~~~~~~~   78 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE---GHDVYAVQADVSKVE--DANRLVEEA   78 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc---CCeEEEEECCCCCHH--HHHHHHHHH
Confidence            5789999999999999999999999999998765 3 34444454555432   357899999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||||.. ....+.+.+.++++..+++|+.+++.+++.++|+|.+.+ .+++|++||..+..+  .++..
T Consensus        79 ~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~--~~~~~  154 (247)
T PRK12935         79 VNHFGKVDILVNNAGIT-RDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-EGRIISISSIIGQAG--GFGQT  154 (247)
T ss_pred             HHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchhhcCC--CCCCc
Confidence            99999999999999984 445566778899999999999999999999999998765 689999999988766  47788


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.+++.++.++.+.||+++.|+||.++|++.....  +..........+.+++.+++ |++++++++++. 
T Consensus       155 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~e-dva~~~~~~~~~-  230 (247)
T PRK12935        155 NYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVP--EEVRQKIVAKIPKKRFGQAD-EIAKGVVYLCRD-  230 (247)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhcc--HHHHHHHHHhCCCCCCcCHH-HHHHHHHHHcCc-
Confidence            99999999999999999999888999999999999998865432  22333344455666777787 999999999975 


Q ss_pred             CCcccccEEEEcCCc
Q 024517          241 SRYMTGTTIYVDGAQ  255 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~  255 (266)
                      ..+++|+.+.+|||.
T Consensus       231 ~~~~~g~~~~i~~g~  245 (247)
T PRK12935        231 GAYITGQQLNINGGL  245 (247)
T ss_pred             ccCccCCEEEeCCCc
Confidence            358999999999995

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=7.3e-37  Score=252.18  Aligned_cols=239  Identities=22%  Similarity=0.272  Sum_probs=202.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEec-c-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-E-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      |++|||||+++||++++++|+++|++|+++.+ . ++.++..+++...   +.++.++.+|+++++  +++++++++.+.
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~~~~~   75 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL---GFDFRVVEGDVSSFE--SCKAAVAKVEAE   75 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh---CCceEEEEecCCCHH--HHHHHHHHHHHH
Confidence            68999999999999999999999999988874 2 2233333333222   357889999999998  999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhH
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG  163 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~  163 (266)
                      ++++|++|||+|.. ...++.+.+.++++..+++|+.+++.+++.++|+|++.+ .++|+++||..+..+  .+++..|+
T Consensus        76 ~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~~--~~~~~~y~  151 (242)
T TIGR01829        76 LGPIDVLVNNAGIT-RDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQKG--QFGQTNYS  151 (242)
T ss_pred             cCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCC--CCCcchhH
Confidence            99999999999974 445667788999999999999999999999999998765 589999999887766  57889999


Q ss_pred             HhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCc
Q 024517          164 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY  243 (266)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  243 (266)
                      ++|++++.|++.++.++...||+++++.||++.|++.....  +.....+....|..++.+|+ |+++.+.+|++++..+
T Consensus       152 ~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~a~~~~~l~~~~~~~  228 (242)
T TIGR01829       152 AAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMR--EDVLNSIVAQIPVGRLGRPE-EIAAAVAFLASEEAGY  228 (242)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccc--hHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCchhcC
Confidence            99999999999999999989999999999999999875432  33334455567888888887 9999999999988889


Q ss_pred             ccccEEEEcCCcc
Q 024517          244 MTGTTIYVDGAQS  256 (266)
Q Consensus       244 ~~G~~i~~dgG~~  256 (266)
                      ++|+.+.+|||.+
T Consensus       229 ~~G~~~~~~gg~~  241 (242)
T TIGR01829       229 ITGATLSINGGLY  241 (242)
T ss_pred             ccCCEEEecCCcc
Confidence            9999999999964

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-37  Score=255.60  Aligned_cols=245  Identities=27%  Similarity=0.374  Sum_probs=205.0

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCR-LVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~-v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++|+++||||+++||+.++++|+++|++ |++++ +.++.++..+++...   +.++.++.+|+++++  ++.++++.+
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~--~~~~~~~~~   78 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL---GAKAVFVQADLSDVE--DCRRVVAAA   78 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc---CCeEEEEEccCCCHH--HHHHHHHHH
Confidence            57899999999999999999999999998 88888 545555555555332   357888999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||+|.. ...++.+.+.++|+.++++|+.+++.+++.+++.|.+++..++++++||..+..+  .+...
T Consensus        79 ~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~--~~~~~  155 (260)
T PRK06198         79 DEAFGRLDALVNAAGLT-DRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGG--QPFLA  155 (260)
T ss_pred             HHHhCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccC--CCCcc
Confidence            99999999999999984 4456677889999999999999999999999999977543589999999987655  57788


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc-----ccHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV-----GQERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      .|+++|+++++|+++++.|+...||++++|+||++.|++.....     ....+........|.+++.+++ |+++.+.+
T Consensus       156 ~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~  234 (260)
T PRK06198        156 AYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPD-EVARAVAF  234 (260)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHH-HHHHHHHH
Confidence            99999999999999999999999999999999999998743211     1122233333456777777777 99999999


Q ss_pred             HccCCCCcccccEEEEcCCcc
Q 024517          236 LISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      ++++...+++|+.+.+|+|..
T Consensus       235 l~~~~~~~~~G~~~~~~~~~~  255 (260)
T PRK06198        235 LLSDESGLMTGSVIDFDQSVW  255 (260)
T ss_pred             HcChhhCCccCceEeECCccc
Confidence            999888899999999999864

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-37  Score=255.93  Aligned_cols=245  Identities=23%  Similarity=0.326  Sum_probs=205.5

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++|++|||||+++||++++++|+++|++|++++ ++++.++..+++...   +.++.++.+|+++.+  +++++++++.
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~~~~~~~~~~   79 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA---GGKAIGVAMDVTNED--AVNAGIDKVA   79 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc---CceEEEEECCCCCHH--HHHHHHHHHH
Confidence            6799999999999999999999999999999998 666666677666543   357888999999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHH-hccCCCCeEEEEecccccccCCCCCch
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM-KESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      +.++++|++|||+|.. ...++.+.+.++++.++++|+.+++.+++.+++.| ++.+ .++||++||..+..+  .+...
T Consensus        80 ~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~~~~--~~~~~  155 (262)
T PRK13394         80 ERFGSVDILVSNAGIQ-IVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHSHEA--SPLKS  155 (262)
T ss_pred             HHcCCCCEEEECCccC-CCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhhcCC--CCCCc
Confidence            9999999999999984 44566677889999999999999999999999999 5544 689999999877665  46778


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc---------HHH-HHHHhhccCCCCCCCChhhHH
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ---------ERA-VKLVREAAPLHRWLDVKNDLA  230 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~dva  230 (266)
                      .|+++|++++.+++.++.++.+.+|+++.|.||++.|++.......         +.. ...+....+..++.+++ |++
T Consensus       156 ~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva  234 (262)
T PRK13394        156 AYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVE-DVA  234 (262)
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHH-HHH
Confidence            9999999999999999999998899999999999999976433211         111 12223345566778887 999


Q ss_pred             HHHHHHccCCCCcccccEEEEcCCccc
Q 024517          231 STVIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      ++++++++.....++|+.+.+|+|..+
T Consensus       235 ~a~~~l~~~~~~~~~g~~~~~~~g~~~  261 (262)
T PRK13394        235 QTVLFLSSFPSAALTGQSFVVSHGWFM  261 (262)
T ss_pred             HHHHHHcCccccCCcCCEEeeCCceec
Confidence            999999987778899999999999643

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=3.8e-37  Score=239.79  Aligned_cols=248  Identities=28%  Similarity=0.329  Sum_probs=220.1

Q ss_pred             CCCCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDG--DEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      +.|+||+.||+|-.  ..|++.||+.|.++|+++..+...+++++..+++.+..   ....+++||+++.+  +++++++
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~---~s~~v~~cDV~~d~--~i~~~f~   76 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEEL---GSDLVLPCDVTNDE--SIDALFA   76 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhc---cCCeEEecCCCCHH--HHHHHHH
Confidence            35899999999987  78999999999999999999996667777777776553   24678999999988  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCC---CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC
Q 024517           79 KACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL  155 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~  155 (266)
                      ++.++||++|.+||+.++.+.   .+++.+.+.+.|...+++..++...++|++.|.|..   +|.++.++=..+...  
T Consensus        77 ~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~---ggSiltLtYlgs~r~--  151 (259)
T COG0623          77 TIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN---GGSILTLTYLGSERV--  151 (259)
T ss_pred             HHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC---CCcEEEEEeccceee--
Confidence            999999999999999998431   246778999999999999999999999999999987   789999987777666  


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      .|+|...+.+|++|+.-+|.|+.++++.|||||+|+.|+|.|-.......-.....+.....|++|..+.+ ||++..+|
T Consensus       152 vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~e-eVG~tA~f  230 (259)
T COG0623         152 VPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIE-EVGNTAAF  230 (259)
T ss_pred             cCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHH-HhhhhHHH
Confidence            68999999999999999999999999999999999999999966555444456667778899999999987 99999999


Q ss_pred             HccCCCCcccccEEEEcCCccccC
Q 024517          236 LISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      |+|+-++.+||+++.||+|++++.
T Consensus       231 LlSdLssgiTGei~yVD~G~~i~~  254 (259)
T COG0623         231 LLSDLSSGITGEIIYVDSGYHIMG  254 (259)
T ss_pred             HhcchhcccccceEEEcCCceeec
Confidence            999999999999999999999875

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-37  Score=252.86  Aligned_cols=213  Identities=21%  Similarity=0.306  Sum_probs=174.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      +++||||++|||++++++|+++|++|++++ +.+++++..+++        ++.++.+|+++.+  +++++++++.   +
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~--------~~~~~~~D~~~~~--~v~~~~~~~~---~   68 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL--------DVDAIVCDNTDPA--SLEEARGLFP---H   68 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--------cCcEEecCCCCHH--HHHHHHHHHh---h
Confidence            489999999999999999999999999998 555554444332        3567889999988  9999888764   2


Q ss_pred             CCCEEEEcCCCCCC-C----CCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           86 NLDAFVHCYTYEGK-M----QDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        86 ~id~li~~ag~~~~-~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      ++|++|||+|.... .    .++.+ +.++|++++++|+.+++.++|.++|+|++   +|+||++||.+      .+...
T Consensus        69 ~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~Iv~isS~~------~~~~~  138 (223)
T PRK05884         69 HLDTIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS---GGSIISVVPEN------PPAGS  138 (223)
T ss_pred             cCcEEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCeEEEEecCC------CCCcc
Confidence            69999999985211 1    12333 46899999999999999999999999964   58999999975      24567


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|+|+.+|+++++.|++++|||||+|+||+++|++....           ...|.   .+|+ |+++.+.||+++.
T Consensus       139 ~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~-----------~~~p~---~~~~-~ia~~~~~l~s~~  203 (223)
T PRK05884        139 AEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGL-----------SRTPP---PVAA-EIARLALFLTTPA  203 (223)
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhc-----------cCCCC---CCHH-HHHHHHHHHcCch
Confidence            8999999999999999999999999999999999999864221           12232   3565 9999999999999


Q ss_pred             CCcccccEEEEcCCccc
Q 024517          241 SRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~  257 (266)
                      +.+++|+.+.+|||...
T Consensus       204 ~~~v~G~~i~vdgg~~~  220 (223)
T PRK05884        204 ARHITGQTLHVSHGALA  220 (223)
T ss_pred             hhccCCcEEEeCCCeec
Confidence            99999999999999753

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-37  Score=252.38  Aligned_cols=239  Identities=28%  Similarity=0.448  Sum_probs=198.2

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++++++||||+++||+++++.|+++|++|++++ +.++.++..+.        ....++.+|+++.+  ++.++++.
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~--------~~~~~~~~D~~~~~--~v~~~~~~   74 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGE--------TGCEPLRLDVGDDA--AIRAALAA   74 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--------hCCeEEEecCCCHH--HHHHHHHH
Confidence            346789999999999999999999999999999998 44444333322        23567889999987  88777765


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                          ++++|++|||+|.. ...+..+.+.+++++.+++|+.+++.+++++.+.+.+....++||++||..+..+  .+..
T Consensus        75 ----~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~  147 (245)
T PRK07060         75 ----AGAFDGLVNCAGIA-SLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVG--LPDH  147 (245)
T ss_pred             ----hCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCC--CCCC
Confidence                57899999999984 5566667888999999999999999999999999876543489999999988776  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.+++.++.++.+.||++++|+||++.|++.............+....|.+++.+++ |+++.+.+++++
T Consensus       148 ~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~a~~~~~l~~~  226 (245)
T PRK07060        148 LAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVD-DVAAPILFLLSD  226 (245)
T ss_pred             cHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHcCc
Confidence            8999999999999999999999889999999999999998654333333333444567778888887 999999999998


Q ss_pred             CCCcccccEEEEcCCccc
Q 024517          240 GSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~  257 (266)
                      ...+++|+.+.+|||..+
T Consensus       227 ~~~~~~G~~~~~~~g~~~  244 (245)
T PRK07060        227 AASMVSGVSLPVDGGYTA  244 (245)
T ss_pred             ccCCccCcEEeECCCccC
Confidence            889999999999999754

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-36  Score=253.05  Aligned_cols=243  Identities=21%  Similarity=0.319  Sum_probs=202.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-c-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-N-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++++++||||+++||+++|++|+++|++|+++. + .++.++..+.+...   +.++.++.+|++|.+  ++.++++++
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~d~~--~i~~~~~~~   78 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN---GGKAFLIEADLNSID--GVKKLVEQL   78 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCcEEEEEcCcCCHH--HHHHHHHHH
Confidence            5789999999999999999999999999998754 3 44444555454322   346889999999999  999999999


Q ss_pred             HHHh------CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC
Q 024517           81 CQIL------GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG  154 (266)
Q Consensus        81 ~~~~------g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~  154 (266)
                      .+.+      +++|++|||+|.. ...++.+.+.+.|+.++++|+.+++.+++.+.++|.+   .+++|++||..+..+ 
T Consensus        79 ~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~v~~sS~~~~~~-  153 (254)
T PRK12746         79 KNELQIRVGTSEIDILVNNAGIG-TQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA---EGRVINISSAEVRLG-  153 (254)
T ss_pred             HHHhccccCCCCccEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEEECCHHhcCC-
Confidence            9887      4799999999974 4456777889999999999999999999999999865   479999999887665 


Q ss_pred             CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHH
Q 024517          155 LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI  234 (266)
Q Consensus       155 ~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (266)
                       .++...|+++|++++.++++++.++.+.|++++.|+||+++|++.......+..........+.+++.+++ |+++.+.
T Consensus       154 -~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~  231 (254)
T PRK12746        154 -FTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVE-DIADAVA  231 (254)
T ss_pred             -CCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHH-HHHHHHH
Confidence             57888999999999999999999999999999999999999998765433343444444555667777776 9999999


Q ss_pred             HHccCCCCcccccEEEEcCCccc
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +++++...+++|+.+.+|||.++
T Consensus       232 ~l~~~~~~~~~g~~~~i~~~~~~  254 (254)
T PRK12746        232 FLASSDSRWVTGQIIDVSGGFCL  254 (254)
T ss_pred             HHcCcccCCcCCCEEEeCCCccC
Confidence            99988778899999999999653

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.4e-36  Score=252.67  Aligned_cols=244  Identities=26%  Similarity=0.352  Sum_probs=202.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEecc--cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE--RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|++|||||+++||++++++|+++|++|+++++.  +..++..+.+...   +.++.++.+|+++++  ++.++++++.+
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~~~~   76 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL---GVEVIFFPADVADLS--AHEAMLDAAQA   76 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc---CCceEEEEecCCCHH--HHHHHHHHHHH
Confidence            4799999999999999999999999999998833  2333444444322   357899999999998  99999999999


Q ss_pred             HhCCCCEEEEcCCCCCC-CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCC-----CCeEEEEecccccccCCC
Q 024517           83 ILGNLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA-----GGSIVFLTSIIGAERGLY  156 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-----~g~iv~iss~~~~~~~~~  156 (266)
                      .++++|++|||+|.... ..++.+.+.++|+..+++|+.+++.+++.+.+.|.+...     .++++++||..+..+  .
T Consensus        77 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--~  154 (256)
T PRK12745         77 AWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMV--S  154 (256)
T ss_pred             hcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccC--C
Confidence            99999999999997432 245667888999999999999999999999999986542     357999999988766  4


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHH-hhccCCCCCCCChhhHHHHHHH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV-REAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      +....|+++|++++.+++.++.++.++||+++.|+||.+.|++.....  ....... ....|..++++++ |+++.+.+
T Consensus       155 ~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-d~a~~i~~  231 (256)
T PRK12745        155 PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVT--AKYDALIAKGLVPMPRWGEPE-DVARAVAA  231 (256)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccc--hhHHhhhhhcCCCcCCCcCHH-HHHHHHHH
Confidence            777899999999999999999999989999999999999998765432  2222222 2246777788887 99999999


Q ss_pred             HccCCCCcccccEEEEcCCcccc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      ++++...+++|+.+.+|||.++.
T Consensus       232 l~~~~~~~~~G~~~~i~gg~~~~  254 (256)
T PRK12745        232 LASGDLPYSTGQAIHVDGGLSIP  254 (256)
T ss_pred             HhCCcccccCCCEEEECCCeecc
Confidence            99888889999999999998864

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=8.5e-37  Score=283.94  Aligned_cols=247  Identities=24%  Similarity=0.277  Sum_probs=208.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++|++|||||++|||++++++|+++|++|++++ +.+.+++..+.+....+ ..++..+.+|+++.+  +++++++++.
T Consensus       412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~-~~~~~~v~~Dvtd~~--~v~~a~~~i~  488 (676)
T TIGR02632       412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFG-AGRAVALKMDVTDEQ--AVKAAFADVA  488 (676)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcC-CCcEEEEECCCCCHH--HHHHHHHHHH
Confidence            5789999999999999999999999999999999 66666666666653322 136788999999998  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.+|++|++|||||. ....++.+.+.++|+..+++|+.+++.+++.+++.|++++.+++||++||..+..+  .++...
T Consensus       489 ~~~g~iDilV~nAG~-~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~--~~~~~a  565 (676)
T TIGR02632       489 LAYGGVDIVVNNAGI-ATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYA--GKNASA  565 (676)
T ss_pred             HhcCCCcEEEECCCC-CCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCC--CCCCHH
Confidence            999999999999997 34467778889999999999999999999999999987654579999999988776  578899


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC--Cccccc----------ccHHHHHHHhhccCCCCCCCChhhH
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD--EYPIAV----------GQERAVKLVREAAPLHRWLDVKNDL  229 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~--~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~dv  229 (266)
                      |+++|++++.++++++.++++.|||||+|+||.|.++  ++....          ...+....+....|+++..+|+ |+
T Consensus       566 Y~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~pe-DV  644 (676)
T TIGR02632       566 YSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPA-DI  644 (676)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHH-HH
Confidence            9999999999999999999999999999999999753  322110          0122233455678888989887 99


Q ss_pred             HHHHHHHccCCCCcccccEEEEcCCcc
Q 024517          230 ASTVIYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       230 a~~~~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      |+.+.+|+++...++||+.+.+|||.+
T Consensus       645 A~av~~L~s~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       645 AEAVFFLASSKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             HHHHHHHhCCcccCCcCcEEEECCCch
Confidence            999999999878899999999999964

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-36  Score=252.69  Aligned_cols=248  Identities=21%  Similarity=0.315  Sum_probs=208.7

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +|++|||||+++||++++++|+++|++|++++ +.++.++..+.+.     +.++.++.+|+++.+  ++.++++++.++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~--~~~~~~~~~~~~   74 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG-----DARFVPVACDLTDAA--SLAAALANAAAE   74 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----CCceEEEEecCCCHH--HHHHHHHHHHHH
Confidence            57999999999999999999999999999998 5555555555542     247889999999999  999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhH
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG  163 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~  163 (266)
                      ++++|++||++|.. ...++.+.+.++|+..+.+|+.+++.+++++.+.+.+++ .++++++||..+...   .+...|+
T Consensus        75 ~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~---~~~~~y~  149 (257)
T PRK07074         75 RGPVDVLVANAGAA-RAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVNGMAA---LGHPAYS  149 (257)
T ss_pred             cCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcCC---CCCcccH
Confidence            99999999999984 335666788899999999999999999999999997765 689999999766433   4567899


Q ss_pred             HhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-cHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCC
Q 024517          164 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR  242 (266)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  242 (266)
                      .+|++++.++++++.+++++||+++.++||++.|++...... ............|..++..++ |+++++.+|+++...
T Consensus       150 ~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~a~~~~~l~~~~~~  228 (257)
T PRK07074        150 AAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPD-DVANAVLFLASPAAR  228 (257)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHH-HHHHHHHHHcCchhc
Confidence            999999999999999999999999999999999997643221 223334444466777888887 999999999998788


Q ss_pred             cccccEEEEcCCccccCCCccCC
Q 024517          243 YMTGTTIYVDGAQSITRPRMRSY  265 (266)
Q Consensus       243 ~~~G~~i~~dgG~~~~~~~~~~~  265 (266)
                      +++|+.+.+|||.....-++.+.
T Consensus       229 ~~~g~~~~~~~g~~~~~~~~~~~  251 (257)
T PRK07074        229 AITGVCLPVDGGLTAGNREMART  251 (257)
T ss_pred             CcCCcEEEeCCCcCcCChhhhhh
Confidence            99999999999998877666554

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-36  Score=249.94  Aligned_cols=233  Identities=21%  Similarity=0.277  Sum_probs=194.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      |++|+++||||++|||++++++|+++|++|++++ +.++.++..+++....  +..+.++.+|+++.+.+++.++++++.
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~i~   81 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAG--HPEPFAIRFDLMSAEEKEFEQFAATIA   81 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcC--CCCcceEEeeecccchHHHHHHHHHHH
Confidence            6789999999999999999999999999999999 6666666666664321  235778899998754448899999999


Q ss_pred             HHh-CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           82 QIL-GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        82 ~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      +.+ +++|++|||||......++.+.+.++|++.+++|+.+++.+++.++|.|.+.+ .+++++++|..+..+  .+...
T Consensus        82 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~--~~~~~  158 (239)
T PRK08703         82 EATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP-DASVIFVGESHGETP--KAYWG  158 (239)
T ss_pred             HHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC-CCEEEEEeccccccC--CCCcc
Confidence            888 88999999999754556778889999999999999999999999999998765 689999999888766  57788


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCC-CcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKH-KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~-~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      .|+++|++++.|+++++.|+.++ +|||+.|.||+|+||+.......+.          ..++.+++ |++..+.|++++
T Consensus       159 ~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~----------~~~~~~~~-~~~~~~~~~~~~  227 (239)
T PRK08703        159 GFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEA----------KSERKSYG-DVLPAFVWWASA  227 (239)
T ss_pred             chHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCC----------ccccCCHH-HHHHHHHHHhCc
Confidence            99999999999999999999876 6999999999999998654221111          11234565 999999999999


Q ss_pred             CCCcccccEEEE
Q 024517          240 GSRYMTGTTIYV  251 (266)
Q Consensus       240 ~~~~~~G~~i~~  251 (266)
                      .+.++||+++.+
T Consensus       228 ~~~~~~g~~~~~  239 (239)
T PRK08703        228 ESKGRSGEIVYL  239 (239)
T ss_pred             cccCcCCeEeeC
Confidence            999999999864

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.6e-36  Score=248.08  Aligned_cols=244  Identities=24%  Similarity=0.362  Sum_probs=207.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEE-e-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLV-G-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |++.+|++|||||+++||++++++|+++|++|+++ + +.++.++..+.+...   +.++.++.+|+++++  +++++++
T Consensus         1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~   75 (247)
T PRK05565          1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE---GGDAIAVKADVSSEE--DVENLVE   75 (247)
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCeEEEEECCCCCHH--HHHHHHH
Confidence            78899999999999999999999999999999998 7 555555555555432   357889999999999  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++.+.++++|++||++|.. ...++.+.+.++++..+++|+.+++.+++.+.+.+.+.+ .+++|++||..+..+  .+.
T Consensus        76 ~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~--~~~  151 (247)
T PRK05565         76 QIVEKFGKIDILVNNAGIS-NFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNISSIWGLIG--ASC  151 (247)
T ss_pred             HHHHHhCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCHhhccC--CCC
Confidence            9999999999999999985 556677788999999999999999999999999998765 689999999887766  477


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ...|+++|++++.++++++.++...|+++++|+||+++|++...... . .........+..+..+++ ++++.+.++++
T Consensus       152 ~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~-~-~~~~~~~~~~~~~~~~~~-~va~~~~~l~~  228 (247)
T PRK05565        152 EVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSE-E-DKEGLAEEIPLGRLGKPE-EIAKVVLFLAS  228 (247)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccCh-H-HHHHHHhcCCCCCCCCHH-HHHHHHHHHcC
Confidence            88999999999999999999999899999999999999988765431 2 222222245556666776 99999999999


Q ss_pred             CCCCcccccEEEEcCCcc
Q 024517          239 DGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~  256 (266)
                      .....++|+.+.+|+|+.
T Consensus       229 ~~~~~~~g~~~~~~~~~~  246 (247)
T PRK05565        229 DDASYITGQIITVDGGWT  246 (247)
T ss_pred             CccCCccCcEEEecCCcc
Confidence            988999999999999964

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=6.9e-36  Score=246.93  Aligned_cols=245  Identities=26%  Similarity=0.389  Sum_probs=207.4

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-ccc-ccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NER-RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |.+++|++|||||+++||++++++|+++|++|+++. +.+ ..++..+++...   +.++.++.+|+++.+  ++.++++
T Consensus         1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~~~~~~~   75 (248)
T PRK05557          1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL---GGKALAVQGDVSDAE--SVERAVD   75 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc---CCceEEEEcCCCCHH--HHHHHHH
Confidence            788999999999999999999999999999998777 443 244444544332   357889999999999  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++.+.++++|++||++|.. ...++.+.+.++++..+++|+.+++.+.+.+.+++.+.+ .++++++||..+..+  .+.
T Consensus        76 ~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~iss~~~~~~--~~~  151 (248)
T PRK05557         76 EAKAEFGGVDILVNNAGIT-RDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-SGRIINISSVVGLMG--NPG  151 (248)
T ss_pred             HHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcccccCcC--CCC
Confidence            9999999999999999984 446666788899999999999999999999999997765 579999999877665  477


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ...|+++|++++.+++.++.++...|++++.|+||+++|++....  ............|.+++.+++ |+++.+.+|++
T Consensus       152 ~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~~  228 (248)
T PRK05557        152 QANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL--PEDVKEAILAQIPLGRLGQPE-EIASAVAFLAS  228 (248)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc--ChHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcC
Confidence            889999999999999999999998999999999999999886553  233344445566777777776 99999999998


Q ss_pred             CCCCcccccEEEEcCCccc
Q 024517          239 DGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~~  257 (266)
                      +...+++|+.+.+|||.++
T Consensus       229 ~~~~~~~g~~~~i~~~~~~  247 (248)
T PRK05557        229 DEAAYITGQTLHVNGGMVM  247 (248)
T ss_pred             cccCCccccEEEecCCccC
Confidence            8778999999999999765

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=2e-36  Score=250.49  Aligned_cols=226  Identities=19%  Similarity=0.278  Sum_probs=186.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      ++++||||++|||+++|++|+ +|++|++++ +.++++++.+++.+..  +..+.++.||++|.+  +++++++++.+.+
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~d~~--~v~~~~~~~~~~~   75 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRG--ATSVHVLSFDAQDLD--THRELVKQTQELA   75 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcc--CCceEEEEcccCCHH--HHHHHHHHHHHhc
Confidence            579999999999999999999 599999999 7777787777776441  135788999999999  9999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHH
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA  164 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~  164 (266)
                      |++|++|||||.... .+..+.+.+++++++++|+.+++.+++.++|.|.+++.+|+||++||..+..+  .++...|++
T Consensus        76 g~id~lv~nag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~--~~~~~~Y~a  152 (246)
T PRK05599         76 GEISLAVVAFGILGD-QERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRA--RRANYVYGS  152 (246)
T ss_pred             CCCCEEEEecCcCCC-chhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccC--CcCCcchhh
Confidence            999999999998432 34445677788999999999999999999999976543589999999988776  578899999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCcc
Q 024517          165 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM  244 (266)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  244 (266)
                      +|+|+++|+++++.|++++|||||+|+||+++|++.....             |.....+|+ |+|+.++++++....  
T Consensus       153 sKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~-------------~~~~~~~pe-~~a~~~~~~~~~~~~--  216 (246)
T PRK05599        153 TKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK-------------PAPMSVYPR-DVAAAVVSAITSSKR--  216 (246)
T ss_pred             HHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCC-------------CCCCCCCHH-HHHHHHHHHHhcCCC--
Confidence            9999999999999999999999999999999999754321             111123565 999999999976432  


Q ss_pred             cccEEEEcCCcc
Q 024517          245 TGTTIYVDGAQS  256 (266)
Q Consensus       245 ~G~~i~~dgG~~  256 (266)
                       ++.+.++++..
T Consensus       217 -~~~~~~~~~~~  227 (246)
T PRK05599        217 -STTLWIPGRLR  227 (246)
T ss_pred             -CceEEeCccHH
Confidence             55677777653

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-35  Score=248.03  Aligned_cols=239  Identities=22%  Similarity=0.304  Sum_probs=196.4

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |+..+|++|||||++|||++++++|+++|++|+++. +. +..+++.+++...   +.++.++.+|++|.+  ++.++++
T Consensus         5 ~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~--~~~~~~~   79 (258)
T PRK09134          5 SMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL---GRRAVALQADLADEA--EVRALVA   79 (258)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCeEEEEEcCCCCHH--HHHHHHH
Confidence            356789999999999999999999999999998876 33 3444555555433   357889999999999  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++.+.++++|++|||||.. ...++.+.+.++|+.++++|+.+++.+++.+.++|.+.. .+.+++++|..+..+  .+.
T Consensus        80 ~~~~~~~~iD~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~~s~~~~~~--~p~  155 (258)
T PRK09134         80 RASAALGPITLLVNNASLF-EYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADA-RGLVVNMIDQRVWNL--NPD  155 (258)
T ss_pred             HHHHHcCCCCEEEECCcCC-CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECchhhcCC--CCC
Confidence            9999999999999999974 445677888999999999999999999999999998765 689999998766554  466


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      +..|+++|++++.++++++.++.+. |++++|+||++.|+....   ...+. ......+.++..+++ |+|+.++++++
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~---~~~~~-~~~~~~~~~~~~~~~-d~a~~~~~~~~  229 (258)
T PRK09134        156 FLSYTLSKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQS---PEDFA-RQHAATPLGRGSTPE-EIAAAVRYLLD  229 (258)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCcccC---hHHHH-HHHhcCCCCCCcCHH-HHHHHHHHHhc
Confidence            7899999999999999999999875 999999999998865321   12222 223345666767777 99999999997


Q ss_pred             CCCCcccccEEEEcCCcc
Q 024517          239 DGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~  256 (266)
                      .  .+++|+.+.+|||..
T Consensus       230 ~--~~~~g~~~~i~gg~~  245 (258)
T PRK09134        230 A--PSVTGQMIAVDGGQH  245 (258)
T ss_pred             C--CCcCCCEEEECCCee
Confidence            4  579999999999964

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.1e-36  Score=247.46  Aligned_cols=245  Identities=22%  Similarity=0.304  Sum_probs=199.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe--cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG--NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |+++++++|||||+++||++++++|+++|++|++..  +.+...+....+.+.   +.++.++.+|+++.+  ++.++++
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~   76 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN---GGEGIGVLADVSTRE--GCETLAK   76 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc---CCeeEEEEeccCCHH--HHHHHHH
Confidence            568899999999999999999999999999988765  233333333444332   356788999999999  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++.+.++++|++|||||. ....++.+.+.++++..+++|+.+++.+++.+.|+|.+   .+++|++||..+..+  .++
T Consensus        77 ~~~~~~~~~d~vi~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~sS~~~~~~--~~~  150 (252)
T PRK06077         77 ATIDRYGVADILVNNAGL-GLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE---GGAIVNIASVAGIRP--AYG  150 (252)
T ss_pred             HHHHHcCCCCEEEECCCC-CCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc---CcEEEEEcchhccCC--CCC
Confidence            999999999999999998 34466777888999999999999999999999999875   479999999988766  688


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--cHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      ...|+++|++++.+++++++++++ +|+++.|.||+++|++......  ............+.+++.+++ |+|+.++++
T Consensus       151 ~~~Y~~sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~~  228 (252)
T PRK06077        151 LSIYGAMKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPE-EVAEFVAAI  228 (252)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHH-HHHHHHHHH
Confidence            899999999999999999999988 8999999999999987543211  000111112233445667777 999999999


Q ss_pred             ccCCCCcccccEEEEcCCccccCC
Q 024517          237 ISDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                      ++.  ..++|+.+.+|+|..++++
T Consensus       229 ~~~--~~~~g~~~~i~~g~~~~~~  250 (252)
T PRK06077        229 LKI--ESITGQVFVLDSGESLKGG  250 (252)
T ss_pred             hCc--cccCCCeEEecCCeeccCC
Confidence            964  4689999999999998876

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-36  Score=254.30  Aligned_cols=229  Identities=20%  Similarity=0.243  Sum_probs=187.8

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      .+++|++|||||++|||+++|++|+++|++|++++ +.+.+++..+++...   +.++.++.+|+++.+  ++.++++++
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~---~~~~~~~~~Dv~d~~--~v~~~~~~~   77 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE---GFDVHGVMCDVRHRE--EVTHLADEA   77 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEeCCCCCHH--HHHHHHHHH
Confidence            46899999999999999999999999999999999 666677776666533   357889999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||||. ....++.+.+.++|+.++++|+.+++.+++.++|.|.+++.+|+||++||..+..+  .++..
T Consensus        78 ~~~~g~id~li~nAg~-~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~--~~~~~  154 (275)
T PRK05876         78 FRLLGHVDVVFSNAGI-VVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP--NAGLG  154 (275)
T ss_pred             HHHcCCCCEEEECCCc-CCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC--CCCCc
Confidence            9999999999999998 45567888999999999999999999999999999977643589999999988766  57889


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc--HHHHH----HHhhccCC-CCCCCChhhHHHHH
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ--ERAVK----LVREAAPL-HRWLDVKNDLASTV  233 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~----~~~~~~~~-~~~~~~~~dva~~~  233 (266)
                      .|+++|+++.+|+++++.|+.++||++++|+||+++|++.......  .....    ......|. ..+.+|+ |+|+.+
T Consensus       155 ~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~  233 (275)
T PRK05876        155 AYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVD-DIAQLT  233 (275)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHH-HHHHHH
Confidence            9999999999999999999999999999999999999986442110  00000    00011111 1245565 999999


Q ss_pred             HHHccC
Q 024517          234 IYLISD  239 (266)
Q Consensus       234 ~~l~s~  239 (266)
                      +..+..
T Consensus       234 ~~ai~~  239 (275)
T PRK05876        234 ADAILA  239 (275)
T ss_pred             HHHHHc
Confidence            888743

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=1.7e-35  Score=245.21  Aligned_cols=245  Identities=25%  Similarity=0.398  Sum_probs=208.3

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++|++|||||+++||++++++|+++|++|++++ +.++..+..+.+...   +.++.++.+|+++.+  +++++++++.
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~--~~~~~~~~~~   78 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA---GGKARARQVDVRDRA--ALKAAVAAGV   78 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEECCCCCHH--HHHHHHHHHH
Confidence            5689999999999999999999999999999998 555555555555433   346889999999998  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccc-ccCCCCCch
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGA-ERGLYPGAA  160 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~~~  160 (266)
                      ..++++|++||++|.. ...++.+.+.++++..++.|+.+++.+.+.+.|+|.+++ .++++++||..+. .+  .+...
T Consensus        79 ~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~~~~--~~~~~  154 (251)
T PRK12826         79 EDFGRLDILVANAGIF-PLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGPRVG--YPGLA  154 (251)
T ss_pred             HHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhhccC--CCCcc
Confidence            9999999999999874 346677788999999999999999999999999998766 6899999998876 44  57888


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.+++.++.++.+.|++++.|.||.+.|+....... ...........|.+++.+++ |+++.+.++++..
T Consensus       155 ~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~  232 (251)
T PRK12826        155 HYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGD-AQWAEAIAAAIPLGRLGEPE-DIAAAVLFLASDE  232 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCc-hHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCcc
Confidence            999999999999999999998889999999999999998755322 22233344566777788877 9999999999887


Q ss_pred             CCcccccEEEEcCCcccc
Q 024517          241 SRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~~  258 (266)
                      ..+++|+.+.+|||....
T Consensus       233 ~~~~~g~~~~~~~g~~~~  250 (251)
T PRK12826        233 ARYITGQTLPVDGGATLP  250 (251)
T ss_pred             ccCcCCcEEEECCCccCC
Confidence            788999999999998764

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9e-36  Score=266.96  Aligned_cols=241  Identities=22%  Similarity=0.229  Sum_probs=199.0

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++++++|||||++|||++++++|+++|++|++++++...++..+... .    ....++.+|+++.+  +++++++.+.+
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~-~----~~~~~~~~Dv~~~~--~~~~~~~~~~~  280 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVAN-R----VGGTALALDITAPD--APARIAEHLAE  280 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHH-H----cCCeEEEEeCCCHH--HHHHHHHHHHH
Confidence            46899999999999999999999999999999885433333222222 2    13457889999998  99999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhh
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY  162 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y  162 (266)
                      .++++|++|||||.. ....+.+.+.++|+.++++|+.+++.+.+.+.+.+..++ +++||++||..+..+  .++...|
T Consensus       281 ~~g~id~vi~~AG~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~g~iv~~SS~~~~~g--~~~~~~Y  356 (450)
T PRK08261        281 RHGGLDIVVHNAGIT-RDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGD-GGRIVGVSSISGIAG--NRGQTNY  356 (450)
T ss_pred             hCCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcCC--CCCChHH
Confidence            999999999999984 446677889999999999999999999999999654444 689999999988766  5788999


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCC
Q 024517          163 GACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR  242 (266)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  242 (266)
                      +++|++++.|+++++.++.+.||++|+|+||+++|++......  ...+......++.+.++|+ |+++++.||+++.+.
T Consensus       357 ~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~--~~~~~~~~~~~l~~~~~p~-dva~~~~~l~s~~~~  433 (450)
T PRK08261        357 AASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPF--ATREAGRRMNSLQQGGLPV-DVAETIAWLASPASG  433 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccch--hHHHHHhhcCCcCCCCCHH-HHHHHHHHHhChhhc
Confidence            9999999999999999999999999999999999988654321  1111122334566767777 999999999999889


Q ss_pred             cccccEEEEcCCccc
Q 024517          243 YMTGTTIYVDGAQSI  257 (266)
Q Consensus       243 ~~~G~~i~~dgG~~~  257 (266)
                      ++||++|.+|||..+
T Consensus       434 ~itG~~i~v~g~~~~  448 (450)
T PRK08261        434 GVTGNVVRVCGQSLL  448 (450)
T ss_pred             CCCCCEEEECCCccc
Confidence            999999999998654

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=4.2e-36  Score=256.42  Aligned_cols=241  Identities=15%  Similarity=0.128  Sum_probs=190.8

Q ss_pred             EEecCCCchHHHHHHHHHHcC-CeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            9 LLTSDGDEISKNIAFHLAKRG-CRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         9 lItGa~~giG~~ia~~l~~~g-~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      |||||++|||++++++|+++| ++|++++ +.++.++..+++...   +.++.++.+|+++.+  +++++++++.+.+++
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~d~~--~v~~~~~~~~~~~~~   75 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP---KDSYTVMHLDLASLD--SVRQFVDNFRRSGRP   75 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEEecCCCHH--HHHHHHHHHHhcCCC
Confidence            699999999999999999999 9999998 555555555555321   347888999999999  999999999988899


Q ss_pred             CCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCC-CCeEEEEecccccccC-----------
Q 024517           87 LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA-GGSIVFLTSIIGAERG-----------  154 (266)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~iv~iss~~~~~~~-----------  154 (266)
                      +|++|||||+..+..++.+.+.++|+.++++|+.+++.+++.++|.|.+.+. +|+||++||..+..+.           
T Consensus        76 iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  155 (308)
T PLN00015         76 LDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANL  155 (308)
T ss_pred             CCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccch
Confidence            9999999998433345667889999999999999999999999999986531 3899999998764210           


Q ss_pred             ----------------------CCCCchhhHHhHHHHHHHHHHHHHHhCC-CCcEEEEEecCcc-cCCCcccccccHHHH
Q 024517          155 ----------------------LYPGAAAYGACAASIHQLVRTAAMEIGK-HKIRVNGIARGLH-LQDEYPIAVGQERAV  210 (266)
Q Consensus       155 ----------------------~~~~~~~y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~pG~v-~t~~~~~~~~~~~~~  210 (266)
                                            .+.+..+|++||+|...+++.+++++.+ .||+||+|+||+| .|++...........
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~  235 (308)
T PLN00015        156 GDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLL  235 (308)
T ss_pred             hhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHH
Confidence                                  0124678999999999999999999975 6999999999999 688875432111111


Q ss_pred             HHHhhccCCCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCc
Q 024517          211 KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ  255 (266)
Q Consensus       211 ~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~  255 (266)
                      .......+.+++.+|+ +.|+.+++++++.....+|+.+..||+.
T Consensus       236 ~~~~~~~~~~~~~~pe-~~a~~~~~l~~~~~~~~~G~~~~~~g~~  279 (308)
T PLN00015        236 FPPFQKYITKGYVSEE-EAGKRLAQVVSDPSLTKSGVYWSWNGGS  279 (308)
T ss_pred             HHHHHHHHhcccccHH-HhhhhhhhhccccccCCCccccccCCcc
Confidence            1112233455667776 9999999999987778999999998874

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-35  Score=244.47  Aligned_cols=239  Identities=24%  Similarity=0.358  Sum_probs=199.0

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cc----cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE----RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAV   77 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~   77 (266)
                      +.+++++||||+++||+++|++|+++|++|++++ +.    +..++..+++...   +.++.++.+|+++.+  ++++++
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~~~~~~   78 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA---GGKALGLAFDVRDFA--ATRAAL   78 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc---CCcEEEEEccCCCHH--HHHHHH
Confidence            5789999999999999999999999999998865 22    2223333333322   357889999999999  999999


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHH-HHHhccCCCCeEEEEecccccccCCC
Q 024517           78 DKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVG-RRMKESKAGGSIVFLTSIIGAERGLY  156 (266)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~~g~iv~iss~~~~~~~~~  156 (266)
                      +++.+.++++|++|||+|.. ...++.+.+.++|+..+++|+.+++.+++.+. +.|++.. .+++|++||..+..+  .
T Consensus        79 ~~~~~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~~--~  154 (249)
T PRK12827         79 DAGVEEFGRLDILVNNAGIA-TDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGVRG--N  154 (249)
T ss_pred             HHHHHHhCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhcCC--C
Confidence            99999889999999999984 44677788899999999999999999999999 5555544 589999999888766  5


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      ++...|+++|++++.++++++.++.+.|+++++|+||+++|++.......    .......|..++.+++ |+++.+.++
T Consensus       155 ~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~-~va~~~~~l  229 (249)
T PRK12827        155 RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT----EHLLNPVPVQRLGEPD-EVAALVAFL  229 (249)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH----HHHHhhCCCcCCcCHH-HHHHHHHHH
Confidence            78889999999999999999999998899999999999999987553211    3334455666666776 999999999


Q ss_pred             ccCCCCcccccEEEEcCCc
Q 024517          237 ISDGSRYMTGTTIYVDGAQ  255 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~  255 (266)
                      +++...+++|+.+.+|||.
T Consensus       230 ~~~~~~~~~g~~~~~~~g~  248 (249)
T PRK12827        230 VSDAASYVTGQVIPVDGGF  248 (249)
T ss_pred             cCcccCCccCcEEEeCCCC
Confidence            9888889999999999985

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-36  Score=260.64  Aligned_cols=238  Identities=19%  Similarity=0.262  Sum_probs=196.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      .+++|++|||||++|||++++++|+++|++|++++ +.+++++..+++.+.   +.++.++.+|++|.+  +++++++++
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~---g~~~~~v~~Dv~d~~--~v~~~~~~~   79 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA---GGEALAVVADVADAE--AVQAAADRA   79 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc---CCcEEEEEecCCCHH--HHHHHHHHH
Confidence            46789999999999999999999999999999999 666677777776543   468899999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||+|. ....++.+.+.++++..+++|+.+++++++.++|+|.+++ .|+||++||..+..+  .+...
T Consensus        80 ~~~~g~iD~lInnAg~-~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~~~--~~~~~  155 (334)
T PRK07109         80 EEELGPIDTWVNNAMV-TVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAYRS--IPLQS  155 (334)
T ss_pred             HHHCCCCCEEEECCCc-CCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhccC--CCcch
Confidence            9999999999999997 4556778889999999999999999999999999998876 699999999988766  57889


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCC--CCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          161 AYGACAASIHQLVRTAAMEIGK--HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~--~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      .|+++|++++.|+++++.|+..  .+|+++.|+||.++||++....  ..   ......|..+..+|+ |+|+.++++++
T Consensus       156 ~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~--~~---~~~~~~~~~~~~~pe-~vA~~i~~~~~  229 (334)
T PRK07109        156 AYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWAR--SR---LPVEPQPVPPIYQPE-VVADAILYAAE  229 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhh--hh---ccccccCCCCCCCHH-HHHHHHHHHHh
Confidence            9999999999999999999975  4799999999999999764321  00   011223445666776 99999999997


Q ss_pred             CCC--CcccccEEEEcCC
Q 024517          239 DGS--RYMTGTTIYVDGA  254 (266)
Q Consensus       239 ~~~--~~~~G~~i~~dgG  254 (266)
                      ...  -++++....++.+
T Consensus       230 ~~~~~~~vg~~~~~~~~~  247 (334)
T PRK07109        230 HPRRELWVGGPAKAAILG  247 (334)
T ss_pred             CCCcEEEeCcHHHHHHHH
Confidence            542  2344444444433

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=4.2e-35  Score=241.94  Aligned_cols=244  Identities=25%  Similarity=0.405  Sum_probs=208.1

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||+++||++++++|+++|++|++++ +.++.+.....+...   +.++.++.+|+++++  ++.+++++
T Consensus         1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~   75 (246)
T PRK05653          1 MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA---GGEARVLVFDVSDEA--AVRALIEA   75 (246)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc---CCceEEEEccCCCHH--HHHHHHHH
Confidence            788999999999999999999999999999999888 555555555555433   357889999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +...++++|++||++|.. ...+..+.+.++++..++.|+.+++.+.+.+.|+|.+.+ .+++|++||..+..+  ....
T Consensus        76 ~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~~~--~~~~  151 (246)
T PRK05653         76 AVEAFGALDILVNNAGIT-RDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVTG--NPGQ  151 (246)
T ss_pred             HHHHhCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhccC--CCCC
Confidence            988899999999999874 446667788999999999999999999999999997765 589999999887665  5778


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+.+|++++.+++++++++.+.|++++.|+||.+.++.....  .....+......|..++.+++ |+++.+.+++++
T Consensus       152 ~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-dva~~~~~~~~~  228 (246)
T PRK05653        152 TNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGL--PEEVKAEILKEIPLGRLGQPE-EVANAVAFLASD  228 (246)
T ss_pred             cHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhh--hHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCc
Confidence            89999999999999999999988899999999999999876431  122333344556777777777 999999999988


Q ss_pred             CCCcccccEEEEcCCcc
Q 024517          240 GSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~  256 (266)
                      ....++|+.+.+|||..
T Consensus       229 ~~~~~~g~~~~~~gg~~  245 (246)
T PRK05653        229 AASYITGQVIPVNGGMY  245 (246)
T ss_pred             hhcCccCCEEEeCCCee
Confidence            88899999999999975

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-35  Score=241.27  Aligned_cols=231  Identities=21%  Similarity=0.249  Sum_probs=193.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      .+|+++||||+++||++++++|+++|++|+++++....     .        ....++.+|+++.+  +++++++++.+.
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-----~--------~~~~~~~~D~~~~~--~~~~~~~~~~~~   66 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----D--------FPGELFACDLADIE--QTAATLAQINEI   66 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-----c--------cCceEEEeeCCCHH--HHHHHHHHHHHh
Confidence            58999999999999999999999999999999843321     0        11247889999998  999999998887


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhH
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG  163 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~  163 (266)
                      + ++|++|||+|.. ...++.+.+.++++..+++|+.+++.+.+.++|+|++.+ .++||++||... .+  .+....|+
T Consensus        67 ~-~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~-~~--~~~~~~Y~  140 (234)
T PRK07577         67 H-PVDAIVNNVGIA-LPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRAI-FG--ALDRTSYS  140 (234)
T ss_pred             C-CCcEEEECCCCC-CCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccccc-cC--CCCchHHH
Confidence            6 699999999984 445666778999999999999999999999999998766 689999999853 33  46788999


Q ss_pred             HhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-cHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCC
Q 024517          164 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR  242 (266)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  242 (266)
                      ++|++++.++++++.|+.+.||++++|+||++.|+++..... ............|.++..+|+ |+|+.+.+|+++...
T Consensus       141 ~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~l~~~~~~  219 (234)
T PRK07577        141 AAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPE-EVAAAIAFLLSDDAG  219 (234)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHH-HHHHHHHHHhCcccC
Confidence            999999999999999999999999999999999998764322 122223344556777767776 999999999998788


Q ss_pred             cccccEEEEcCCcc
Q 024517          243 YMTGTTIYVDGAQS  256 (266)
Q Consensus       243 ~~~G~~i~~dgG~~  256 (266)
                      +++|+.+.+|||.+
T Consensus       220 ~~~g~~~~~~g~~~  233 (234)
T PRK07577        220 FITGQVLGVDGGGS  233 (234)
T ss_pred             CccceEEEecCCcc
Confidence            99999999999965

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=5.1e-35  Score=241.88  Aligned_cols=241  Identities=20%  Similarity=0.281  Sum_probs=199.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe--cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG--NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      |++|||||+++||++++++|+++|++|+++.  +.++.++...++...   +.++..+.+|++|++  +++++++++.+.
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~d~~--~i~~~~~~~~~~   76 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA---GGKAFVLQADISDEN--QVVAMFTAIDQH   76 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC---CCeEEEEEccCCCHH--HHHHHHHHHHHh
Confidence            5899999999999999999999999998753  444445555555432   346888999999999  999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC--CCCeEEEEecccccccCCCCC-ch
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK--AGGSIVFLTSIIGAERGLYPG-AA  160 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~g~iv~iss~~~~~~~~~~~-~~  160 (266)
                      ++++|++|||+|......++.+.+.++|+.++++|+.+++.+++.++++|.+..  .++++|++||..+..+.  +. +.
T Consensus        77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~--~~~~~  154 (247)
T PRK09730         77 DEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA--PGEYV  154 (247)
T ss_pred             CCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC--CCccc
Confidence            999999999999754556677889999999999999999999999999987652  24789999998877663  43 46


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.+++.++.++.+.||++++|+||++.||+..... ............|.++..+++ |+++.+.+++++.
T Consensus       155 ~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-dva~~~~~~~~~~  232 (247)
T PRK09730        155 DYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGG-EPGRVDRVKSNIPMQRGGQPE-EVAQAIVWLLSDK  232 (247)
T ss_pred             chHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCC-CHHHHHHHHhcCCCCCCcCHH-HHHHHHHhhcChh
Confidence            89999999999999999999989999999999999999754322 222333344556777766776 9999999999987


Q ss_pred             CCcccccEEEEcCCc
Q 024517          241 SRYMTGTTIYVDGAQ  255 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~  255 (266)
                      ..+++|+.+.+|||.
T Consensus       233 ~~~~~g~~~~~~g~~  247 (247)
T PRK09730        233 ASYVTGSFIDLAGGK  247 (247)
T ss_pred             hcCccCcEEecCCCC
Confidence            889999999999973

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-35  Score=247.05  Aligned_cols=216  Identities=19%  Similarity=0.209  Sum_probs=185.5

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |+++++++|||||++|||++++++|+++|++|++++ +.+++++..+.+       .++.++.+|+++++  ++++++++
T Consensus         1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~-------~~~~~~~~D~~~~~--~~~~~~~~   71 (273)
T PRK07825          1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL-------GLVVGGPLDVTDPA--SFAAFLDA   71 (273)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-------ccceEEEccCCCHH--HHHHHHHH
Confidence            789999999999999999999999999999999988 555555544443       25778999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||.. ...++.+.+.++++.++++|+.+++.+++.++|.|.+++ .|+||++||..+..+  .++.
T Consensus        72 ~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~  147 (273)
T PRK07825         72 VEADLGPIDVLVNNAGVM-PVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGKIP--VPGM  147 (273)
T ss_pred             HHHHcCCCCEEEECCCcC-CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccccCC--CCCC
Confidence            999999999999999984 556777889999999999999999999999999998876 689999999988776  5888


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|+++++.|+.+.||+++.|+||+++|++......           .+..+..+++ |+|+.+..+++.
T Consensus       148 ~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~-----------~~~~~~~~~~-~va~~~~~~l~~  215 (273)
T PRK07825        148 ATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGG-----------AKGFKNVEPE-DVAAAIVGTVAK  215 (273)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccccc-----------ccCCCCCCHH-HHHHHHHHHHhC
Confidence            9999999999999999999999999999999999999998654210           0111245565 999999999875


Q ss_pred             CC
Q 024517          240 GS  241 (266)
Q Consensus       240 ~~  241 (266)
                      ..
T Consensus       216 ~~  217 (273)
T PRK07825        216 PR  217 (273)
T ss_pred             CC
Confidence            43

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.5e-35  Score=246.69  Aligned_cols=220  Identities=21%  Similarity=0.231  Sum_probs=183.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++|+++||||++|||++++++|+++|++|++++ +.+++++    +..     .++.++.+|+++.+  +++++++++.+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~----~~~-----~~~~~~~~Dv~~~~--~~~~~~~~~~~   70 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMED----LAS-----LGVHPLSLDVTDEA--SIKAAVDTIIA   70 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHh-----CCCeEEEeeCCCHH--HHHHHHHHHHH
Confidence            589999999999999999999999999999988 4443332    221     24788999999998  99999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhh
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY  162 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y  162 (266)
                      .++++|++|||||. ....++.+.+.++++..+++|+.+++.+++.++|.|++++ .|+||++||..+..+  .+....|
T Consensus        71 ~~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~--~~~~~~Y  146 (273)
T PRK06182         71 EEGRIDVLVNNAGY-GSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGKIY--TPLGAWY  146 (273)
T ss_pred             hcCCCCEEEECCCc-CCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcCC--CCCccHh
Confidence            99999999999998 4556788889999999999999999999999999998776 689999999877655  4667789


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--------c--HH----HHHHHhhccCCCCCCCChhh
Q 024517          163 GACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--------Q--ER----AVKLVREAAPLHRWLDVKND  228 (266)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--------~--~~----~~~~~~~~~~~~~~~~~~~d  228 (266)
                      +++|++++.|+++++.|+.+.||+++.|+||+++|++......        .  .+    ....+....+.+++.+|+ |
T Consensus       147 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  225 (273)
T PRK06182        147 HATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPS-V  225 (273)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHH-H
Confidence            9999999999999999999999999999999999997532110        0  00    112333444667777887 9


Q ss_pred             HHHHHHHHccC
Q 024517          229 LASTVIYLISD  239 (266)
Q Consensus       229 va~~~~~l~s~  239 (266)
                      +|+.++++++.
T Consensus       226 vA~~i~~~~~~  236 (273)
T PRK06182        226 IADAISKAVTA  236 (273)
T ss_pred             HHHHHHHHHhC
Confidence            99999999974

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-35  Score=246.38  Aligned_cols=244  Identities=18%  Similarity=0.232  Sum_probs=199.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      |+++||||++|||++++++|+++|++|++++ +.+.+++..+++....  +....++.+|+++.+  +++++++++.+.+
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~--~~~~~~~~~~~~~   76 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG--GTVPEHRALDISDYD--AVAAFAADIHAAH   76 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CCcceEEEeeCCCHH--HHHHHHHHHHHhc
Confidence            5799999999999999999999999999988 5566666666665431  123566889999998  9999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHH
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA  164 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~  164 (266)
                      +++|++|||+|.. ...++.+.+.++++..+++|+.+++.+++.++|.|.+.+..++||++||..+..+  .+....|++
T Consensus        77 ~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~--~~~~~~Y~~  153 (272)
T PRK07832         77 GSMDVVMNIAGIS-AWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVA--LPWHAAYSA  153 (272)
T ss_pred             CCCCEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCC--CCCCcchHH
Confidence            9999999999984 4567778899999999999999999999999999976543589999999887665  578889999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-----cHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          165 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-----QERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      +|+++.+|+++++.|+...||+++.|+||.++|+++.....     +.......... ..++..+|+ |+|+.++++++ 
T Consensus       154 sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~vA~~~~~~~~-  230 (272)
T PRK07832        154 SKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR-FRGHAVTPE-KAAEKILAGVE-  230 (272)
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh-cccCCCCHH-HHHHHHHHHHh-
Confidence            99999999999999999999999999999999998754210     11111111121 234556776 99999999996 


Q ss_pred             CCCcccccEEEEcCCccccC
Q 024517          240 GSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~~  259 (266)
                      ..++++++.+.+++|..+.+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~  250 (272)
T PRK07832        231 KNRYLVYTSPDIRALYWFKR  250 (272)
T ss_pred             cCCeEEecCcchHHHHHHHh
Confidence            45799999999999977765

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.3e-36  Score=226.85  Aligned_cols=239  Identities=24%  Similarity=0.354  Sum_probs=209.9

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .+|-+.|||||.+|+|++.+++|+++|+.|++.+ .+.+.++.++++      +.++.+.++|++++.  +++.++..++
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel------g~~~vf~padvtsek--dv~aala~ak   78 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL------GGKVVFTPADVTSEK--DVRAALAKAK   78 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh------CCceEEeccccCcHH--HHHHHHHHHH
Confidence            3677899999999999999999999999999999 777888888887      578999999999988  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCC-----CCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC-----CCCeEEEEeccccc
Q 024517           82 QILGNLDAFVHCYTYEGKM-----QDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK-----AGGSIVFLTSIIGA  151 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~-----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~g~iv~iss~~~~  151 (266)
                      .+||++|.++||||+....     ..-...+.++|+..+++|+.++|+.++.....|-+..     ..|.||+..|+++.
T Consensus        79 ~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaaf  158 (260)
T KOG1199|consen   79 AKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAF  158 (260)
T ss_pred             hhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeee
Confidence            9999999999999973221     1223467899999999999999999999999997653     25899999999988


Q ss_pred             ccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCC-CCCCChhhHH
Q 024517          152 ERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH-RWLDVKNDLA  230 (266)
Q Consensus       152 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva  230 (266)
                      .+  ..+..+|++||.++.+|+.-++++++..|||++.|.||+++||+....  ++....++...+|.+ |.+.|. |.+
T Consensus       159 dg--q~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllssl--pekv~~fla~~ipfpsrlg~p~-eya  233 (260)
T KOG1199|consen  159 DG--QTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSL--PEKVKSFLAQLIPFPSRLGHPH-EYA  233 (260)
T ss_pred             cC--ccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhh--hHHHHHHHHHhCCCchhcCChH-HHH
Confidence            77  689999999999999999999999999999999999999999998775  566777777888887 677777 999


Q ss_pred             HHHHHHccCCCCcccccEEEEcCCcc
Q 024517          231 STVIYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      ..+-.++.+  .+++|++|++||..-
T Consensus       234 hlvqaiien--p~lngevir~dgalr  257 (260)
T KOG1199|consen  234 HLVQAIIEN--PYLNGEVIRFDGALR  257 (260)
T ss_pred             HHHHHHHhC--cccCCeEEEecceec
Confidence            999998854  689999999998743

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-34  Score=241.30  Aligned_cols=246  Identities=26%  Similarity=0.419  Sum_probs=203.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      .+++|++|||||+++||++++++|+++|++|++++ +.+..++..+....     .++.++.+|+++++  +++++++++
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~--~~~~~~~~~   80 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG-----AKVTATVADVADPA--QVERVFDTA   80 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-----CceEEEEccCCCHH--HHHHHHHHH
Confidence            36899999999999999999999999999999998 44444444433321     26788999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++||++|......++...+.++++.++++|+.+++.+++.+.+.|...+.++.++++||..+..+  .+...
T Consensus        81 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~--~~~~~  158 (264)
T PRK12829         81 VERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLG--YPGRT  158 (264)
T ss_pred             HHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccC--CCCCc
Confidence            9999999999999998545566778889999999999999999999999999877652378999998877655  57788


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc---------cHHHHHHHhhccCCCCCCCChhhHHH
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---------QERAVKLVREAAPLHRWLDVKNDLAS  231 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~  231 (266)
                      .|+++|++++.+++.++.++...+++++.|.||++.|++......         ............|..++.+++ |+++
T Consensus       159 ~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~a~  237 (264)
T PRK12829        159 PYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPE-DIAA  237 (264)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHH-HHHH
Confidence            999999999999999999998889999999999999987643321         112222333456767777777 9999


Q ss_pred             HHHHHccCCCCcccccEEEEcCCccc
Q 024517          232 TVIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       232 ~~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      .+.+++++....++|+.+.+|||..+
T Consensus       238 ~~~~l~~~~~~~~~g~~~~i~~g~~~  263 (264)
T PRK12829        238 TALFLASPAARYITGQAISVDGNVEY  263 (264)
T ss_pred             HHHHHcCccccCccCcEEEeCCCccc
Confidence            99999987667899999999999764

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-34  Score=238.01  Aligned_cols=235  Identities=25%  Similarity=0.343  Sum_probs=197.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |.+++|++|||||+++||++++++|+++|++|++++ +.++..+..+++..     ..+.++.+|+++.+  ++++++++
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~--~~~~~~~~   75 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA-----DALRIGGIDLVDPQ--AARRAVDE   75 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh-----cCceEEEeecCCHH--HHHHHHHH
Confidence            567899999999999999999999999999999999 55555554444432     35677889999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++||++|.. ...++.+.+.+++++.+++|+.+++.+++.+.|.|.+++ .+++|++||..+..+  .+..
T Consensus        76 ~~~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~--~~~~  151 (239)
T PRK12828         76 VNRQFGRLDALVNIAGAF-VWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAALKA--GPGM  151 (239)
T ss_pred             HHHHhCCcCEEEECCccc-CcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHhccC--CCCc
Confidence            999999999999999974 445566778899999999999999999999999998766 689999999987665  4778


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.+++.++.++.+.|++++.|.||++.|++.......          .+..++.+++ |+++.+.+++++
T Consensus       152 ~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~----------~~~~~~~~~~-dva~~~~~~l~~  220 (239)
T PRK12828        152 GAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPD----------ADFSRWVTPE-QIAAVIAFLLSD  220 (239)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCc----------hhhhcCCCHH-HHHHHHHHHhCc
Confidence            89999999999999999999988899999999999999854322111          1123345565 999999999998


Q ss_pred             CCCcccccEEEEcCCccc
Q 024517          240 GSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~  257 (266)
                      ...+++|+.+.+|||..+
T Consensus       221 ~~~~~~g~~~~~~g~~~~  238 (239)
T PRK12828        221 EAQAITGASIPVDGGVAL  238 (239)
T ss_pred             ccccccceEEEecCCEeC
Confidence            777899999999999865

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.3e-34  Score=238.31  Aligned_cols=234  Identities=22%  Similarity=0.337  Sum_probs=196.8

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++|+++||||+++||.+++++|+++|++|++++ +.++.++..+++.+..  +.++.++.+|+++.++++++++++.+.
T Consensus        10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945         10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG--GPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcC--CCCceEEEecccCCCHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999 6666666666665431  246778889998544449999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.++++|++|||||......++.+.+.++|++.+++|+.+++.+.+.++|+|.+.+ .++|+++||..+..+  .+....
T Consensus        88 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~--~~~~~~  164 (247)
T PRK08945         88 EQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQG--RANWGA  164 (247)
T ss_pred             HHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcCC--CCCCcc
Confidence            99999999999999865656777888999999999999999999999999998776 689999999888766  578889


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCC
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS  241 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  241 (266)
                      |+++|++++.|++.++.++...||+++++.||.+.|++......+.          +..++.+|+ |+++.+.+++++..
T Consensus       165 Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~----------~~~~~~~~~-~~~~~~~~~~~~~~  233 (247)
T PRK08945        165 YAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGE----------DPQKLKTPE-DIMPLYLYLMGDDS  233 (247)
T ss_pred             cHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCcc----------cccCCCCHH-HHHHHHHHHhCccc
Confidence            9999999999999999999999999999999999998754322111          113456676 99999999999888


Q ss_pred             CcccccEEEEc
Q 024517          242 RYMTGTTIYVD  252 (266)
Q Consensus       242 ~~~~G~~i~~d  252 (266)
                      ++++|+++...
T Consensus       234 ~~~~g~~~~~~  244 (247)
T PRK08945        234 RRKNGQSFDAQ  244 (247)
T ss_pred             cccCCeEEeCC
Confidence            99999997653

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-34  Score=238.23  Aligned_cols=231  Identities=20%  Similarity=0.260  Sum_probs=191.2

Q ss_pred             CCC-CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MEN-QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l-~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |.. ++|+++||||+++||++++++|+++|++|++++ +.++.+++.+.+...   +.++.++.+|+++++  ++.++++
T Consensus         1 ~~~~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~   75 (241)
T PRK07454          1 MSLNSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST---GVKAAAYSIDLSNPE--AIAPGIA   75 (241)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC---CCcEEEEEccCCCHH--HHHHHHH
Confidence            443 467899999999999999999999999999999 555555565555432   357889999999999  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++.+.++++|++|||+|.. ...++.+.+.++++.++++|+.+++.+++.++|+|.+++ .+++|++||..+..+  .++
T Consensus        76 ~~~~~~~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~--~~~  151 (241)
T PRK07454         76 ELLEQFGCPDVLINNAGMA-YTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAARNA--FPQ  151 (241)
T ss_pred             HHHHHcCCCCEEEECCCcc-CCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCcC--CCC
Confidence            9999999999999999974 446677788999999999999999999999999998765 689999999987665  578


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      +..|+++|++++.++++++.++.+.||+++.|.||+++|++.....    ..    ...+..+..+++ |+|+.+.++++
T Consensus       152 ~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~----~~----~~~~~~~~~~~~-~va~~~~~l~~  222 (241)
T PRK07454        152 WGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTET----VQ----ADFDRSAMLSPE-QVAQTILHLAQ  222 (241)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccc----cc----cccccccCCCHH-HHHHHHHHHHc
Confidence            8999999999999999999999999999999999999999864311    00    011112345555 99999999999


Q ss_pred             CCCCcccccEE
Q 024517          239 DGSRYMTGTTI  249 (266)
Q Consensus       239 ~~~~~~~G~~i  249 (266)
                      ++...+.++.-
T Consensus       223 ~~~~~~~~~~~  233 (241)
T PRK07454        223 LPPSAVIEDLT  233 (241)
T ss_pred             CCccceeeeEE
Confidence            77666666554

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.3e-34  Score=236.95  Aligned_cols=243  Identities=27%  Similarity=0.417  Sum_probs=202.6

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-ccc-ccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NER-RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++.|++|||||+++||++++++|+++|++|++.. +.+ ..+...+.+...   +.++.++.+|+++.+  +++++++++
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~v~~~~~~~   78 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL---GRRAQAVQADVTDKA--ALEAAVAAA   78 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc---CCceEEEECCcCCHH--HHHHHHHHH
Confidence            4678999999999999999999999999987766 333 333344444332   357889999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++||++|. ....++.+.+.++++..+++|+.+++.+.+.+.+++.+.+ .++++++||..+..+  .+...
T Consensus        79 ~~~~~~id~vi~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~~~--~~~~~  154 (249)
T PRK12825         79 VERFGRIDILVNNAGI-FEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGLPG--WPGRS  154 (249)
T ss_pred             HHHcCCCCEEEECCcc-CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccCCC--CCCch
Confidence            8888999999999997 4556677788999999999999999999999999998766 689999999887765  57788


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+.+|++++.+++.++.++.+.|++++.|+||.+.|++............  ....|.+++.+++ |+++.+.++++..
T Consensus       155 ~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-dva~~~~~~~~~~  231 (249)
T PRK12825        155 NYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAK--DAETPLGRSGTPE-DIARAVAFLCSDA  231 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhh--hccCCCCCCcCHH-HHHHHHHHHhCcc
Confidence            999999999999999999999889999999999999998765432221111  2245667777777 9999999999887


Q ss_pred             CCcccccEEEEcCCccc
Q 024517          241 SRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~  257 (266)
                      ...++|+++.+|||..+
T Consensus       232 ~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        232 SDYITGQVIEVTGGVDV  248 (249)
T ss_pred             ccCcCCCEEEeCCCEee
Confidence            78999999999999754

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.8e-35  Score=241.26  Aligned_cols=238  Identities=14%  Similarity=0.235  Sum_probs=190.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      |++|||||++|||++++++|+++|++|+++++.+. +. .+.+.+..  +.++.++.+|+++.+  +++++++++.+.++
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~-~~-~~~~~~~~--~~~~~~~~~D~~~~~--~~~~~~~~~~~~~~   75 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTEN-KE-LTKLAEQY--NSNLTFHSLDLQDVH--ELETNFNEILSSIQ   75 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCch-HH-HHHHHhcc--CCceEEEEecCCCHH--HHHHHHHHHHHhcC
Confidence            68999999999999999999999999999884321 11 11222111  257889999999998  99999999887765


Q ss_pred             C--CC--EEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           86 N--LD--AFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        86 ~--id--~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      .  ++  ++|+|+|...+..++.+.+.++|+..+++|+.+++.+++.++|+|.+.+..++||++||..+..+  .+....
T Consensus        76 ~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~  153 (251)
T PRK06924         76 EDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNP--YFGWSA  153 (251)
T ss_pred             cccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCC--CCCcHH
Confidence            3  22  89999998656677888999999999999999999999999999987542579999999887666  688999


Q ss_pred             hHHhHHHHHHHHHHHHHHhC--CCCcEEEEEecCcccCCCcccccc--cH--HHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          162 YGACAASIHQLVRTAAMEIG--KHKIRVNGIARGLHLQDEYPIAVG--QE--RAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~pG~v~t~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      |+++|++++.|++.++.|++  +.||+|++|.||+++|++......  .+  ...+.+....|.+++.+|+ |+|+.+++
T Consensus       154 Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~  232 (251)
T PRK06924        154 YCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPE-YVAKALRN  232 (251)
T ss_pred             HhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHH-HHHHHHHH
Confidence            99999999999999999975  468999999999999998643211  11  1122333445667777887 99999999


Q ss_pred             HccCCCCcccccEEEEcC
Q 024517          236 LISDGSRYMTGTTIYVDG  253 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dg  253 (266)
                      ++++. .+++|+.+.+|+
T Consensus       233 l~~~~-~~~~G~~~~v~~  249 (251)
T PRK06924        233 LLETE-DFPNGEVIDIDE  249 (251)
T ss_pred             HHhcc-cCCCCCEeehhh
Confidence            99874 799999998875

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-35  Score=246.46  Aligned_cols=239  Identities=21%  Similarity=0.239  Sum_probs=193.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .+|++|||||+++||++++++|+++|++|++++ +.+.+++..+.+      +.++.++.+|+++.+  +++++++.+.+
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~--~~~~~~~~~~~   73 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY------GDRLLPLALDVTDRA--AVFAAVETAVE   73 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------cCCeeEEEccCCCHH--HHHHHHHHHHH
Confidence            478999999999999999999999999999998 444444433322      246788999999998  99999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhh
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY  162 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y  162 (266)
                      .++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|.|++++ .+++|++||..+..+  .+....|
T Consensus        74 ~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~--~~~~~~Y  149 (275)
T PRK08263         74 HFGRLDIVVNNAGYG-LFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGISA--FPMSGIY  149 (275)
T ss_pred             HcCCCCEEEECCCCc-cccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcCC--CCCccHH
Confidence            999999999999984 556777889999999999999999999999999998766 589999999988766  5788899


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-------cHHHHHHHhhccCCCCC-CCChhhHHHHHH
Q 024517          163 GACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-------QERAVKLVREAAPLHRW-LDVKNDLASTVI  234 (266)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~dva~~~~  234 (266)
                      +++|++++.+++.++.++.+.||+++.|+||+++|++......       .........+..+..++ .+|+ |+++.++
T Consensus       150 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-dva~~~~  228 (275)
T PRK08263        150 HASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPE-AAAEALL  228 (275)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHH-HHHHHHH
Confidence            9999999999999999999999999999999999998742110       11122233334455566 7777 9999999


Q ss_pred             HHccCCCCcccccEEEEcCCccc
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      ++++..  ...++.+...++..+
T Consensus       229 ~l~~~~--~~~~~~~~~~~~~~~  249 (275)
T PRK08263        229 KLVDAE--NPPLRLFLGSGVLDL  249 (275)
T ss_pred             HHHcCC--CCCeEEEeCchHHHH
Confidence            999753  345666654444344

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=1.1e-33  Score=234.01  Aligned_cols=245  Identities=27%  Similarity=0.383  Sum_probs=198.2

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |.++++++|||||+++||++++++|+++|++|++++ +. +..++..+.+....  ...+.++.+|+++.+  ++.++++
T Consensus         2 ~~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~--~~~~~~~   77 (249)
T PRK09135          2 MTDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALR--PGSAAALQADLLDPD--ALPELVA   77 (249)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc--CCceEEEEcCCCCHH--HHHHHHH
Confidence            345789999999999999999999999999999998 33 33444444443321  246888999999988  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++.+.++++|++|||+|.. ...++.+.+.++++.++++|+.+++.+++++.|++.++  .+.++++++..+..+  .++
T Consensus        78 ~~~~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~  152 (249)
T PRK09135         78 ACVAAFGRLDALVNNASSF-YPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ--RGAIVNITDIHAERP--LKG  152 (249)
T ss_pred             HHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC--CeEEEEEeChhhcCC--CCC
Confidence            9999999999999999974 44566677888999999999999999999999998764  378888888766554  577


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ...|+++|++++.+++.++.++.+ +++++.|.||++.||...... ............+..+.++++ |+++++.+++.
T Consensus       153 ~~~Y~~sK~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-d~a~~~~~~~~  229 (249)
T PRK09135        153 YPVYCAAKAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSF-DEEARQAILARTPLKRIGTPE-DIAEAVRFLLA  229 (249)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccC-CHHHHHHHHhcCCcCCCcCHH-HHHHHHHHHcC
Confidence            889999999999999999999865 699999999999999865432 223333344455666667776 99999988886


Q ss_pred             CCCCcccccEEEEcCCcccc
Q 024517          239 DGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~~~  258 (266)
                      . ..+.+|+.+.+|+|..++
T Consensus       230 ~-~~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        230 D-ASFITGQILAVDGGRSLT  248 (249)
T ss_pred             c-cccccCcEEEECCCeecc
Confidence            4 457899999999998654

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.1e-34  Score=267.19  Aligned_cols=246  Identities=26%  Similarity=0.339  Sum_probs=209.6

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +.+|++|||||+++||++++++|+++|++|++++ +.+.+++..+++...    .++.++.+|+++.+  +++++++++.
T Consensus       420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~----~~v~~v~~Dvtd~~--~v~~~~~~~~  493 (681)
T PRK08324        420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP----DRALGVACDVTDEA--AVQAAFEEAA  493 (681)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc----CcEEEEEecCCCHH--HHHHHHHHHH
Confidence            4689999999999999999999999999999999 666666665555432    37889999999988  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.+|++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.+.+.|++++.+|+||++||..+..+  .++...
T Consensus       494 ~~~g~iDvvI~~AG~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~--~~~~~~  570 (681)
T PRK08324        494 LAFGGVDIVVSNAGIA-ISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNP--GPNFGA  570 (681)
T ss_pred             HHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCC--CCCcHH
Confidence            9999999999999984 5567788899999999999999999999999999987653489999999988776  478899


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcc--cCCCcccccc----------cHHHHHHHhhccCCCCCCCChhhH
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH--LQDEYPIAVG----------QERAVKLVREAAPLHRWLDVKNDL  229 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v--~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~dv  229 (266)
                      |+++|++++.+++.++.++.+.||++|.|+||.+  .|+++.....          .++....+....+++++.+++ |+
T Consensus       571 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~-Dv  649 (681)
T PRK08324        571 YGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPE-DV  649 (681)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHH-HH
Confidence            9999999999999999999999999999999999  7876543211          122223445567777888887 99


Q ss_pred             HHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          230 ASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       230 a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      |+++++++++....++|+.+.+|||....
T Consensus       650 A~a~~~l~s~~~~~~tG~~i~vdgG~~~~  678 (681)
T PRK08324        650 AEAVVFLASGLLSKTTGAIITVDGGNAAA  678 (681)
T ss_pred             HHHHHHHhCccccCCcCCEEEECCCchhc
Confidence            99999999877789999999999997653

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.3e-34  Score=265.48  Aligned_cols=229  Identities=18%  Similarity=0.220  Sum_probs=190.8

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++++++|||||++|||++++++|+++|++|++++ +.++++++.+.+...   +.++.++.+|+++++  ++.++++++.
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~--~~~~~~~~~~  387 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA---GAVAHAYRVDVSDAD--AMEAFAEWVR  387 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEEcCCCCHH--HHHHHHHHHH
Confidence            4678999999999999999999999999999999 666667777666543   357899999999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.+|++|++|||||. ....++.+.+.++++.++++|+.+++.+++.++|.|.+++.+|+||++||.++..+  .++...
T Consensus       388 ~~~g~id~lv~~Ag~-~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--~~~~~~  464 (582)
T PRK05855        388 AEHGVPDIVVNNAGI-GMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAP--SRSLPA  464 (582)
T ss_pred             HhcCCCcEEEECCcc-CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC--CCCCcH
Confidence            999999999999998 45567778899999999999999999999999999988654589999999988766  578899


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----cH--HHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QE--RAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      |+++|++++.|+++++.|+.+.||+|++|+||+|+|++......    .+  ..........+..+..+|+ |+|+.+++
T Consensus       465 Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~va~~~~~  543 (582)
T PRK05855        465 YATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPE-KVAKAIVD  543 (582)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHH-HHHHHHHH
Confidence            99999999999999999999999999999999999998765321    01  0011111122223334565 99999999


Q ss_pred             HccCC
Q 024517          236 LISDG  240 (266)
Q Consensus       236 l~s~~  240 (266)
                      .++..
T Consensus       544 ~~~~~  548 (582)
T PRK05855        544 AVKRN  548 (582)
T ss_pred             HHHcC
Confidence            99754

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=2.6e-34  Score=246.25  Aligned_cols=238  Identities=14%  Similarity=0.111  Sum_probs=184.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.++.++..+++.       ++.++.+|+++.+  +++++++++
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~-------~v~~~~~Dl~d~~--~v~~~~~~~   93 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID-------GVEVVMLDLADLE--SVRAFAERF   93 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-------hCeEEEccCCCHH--HHHHHHHHH
Confidence            45789999999999999999999999999999998 5555555555442       4678999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc-------
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER-------  153 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~-------  153 (266)
                      .+.++++|++|||||....   ....+.++|+..+++|+.+++.+++.++|.|.+.+ .++||++||..+...       
T Consensus        94 ~~~~~~iD~li~nAg~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~  169 (315)
T PRK06196         94 LDSGRRIDILINNAGVMAC---PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSPIRWDDP  169 (315)
T ss_pred             HhcCCCCCEEEECCCCCCC---CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCCCCcccc
Confidence            9989999999999997422   23456788999999999999999999999998765 589999999755321       


Q ss_pred             ---CCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHH-HHHh-hccCCC-CCCCChh
Q 024517          154 ---GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV-KLVR-EAAPLH-RWLDVKN  227 (266)
Q Consensus       154 ---~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~-~~~~-~~~~~~-~~~~~~~  227 (266)
                         .++++...|+.+|++++.|++.+++++.++||++|+|+||++.|++........... .+.. ...|+. ++.+|+ 
T Consensus       170 ~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  248 (315)
T PRK06196        170 HFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPA-  248 (315)
T ss_pred             CccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHh-
Confidence               113456789999999999999999999999999999999999999875432211111 1111 112332 456666 


Q ss_pred             hHHHHHHHHccCCCCcccccEEEEcC
Q 024517          228 DLASTVIYLISDGSRYMTGTTIYVDG  253 (266)
Q Consensus       228 dva~~~~~l~s~~~~~~~G~~i~~dg  253 (266)
                      |+|..+++|++.......|..+..|.
T Consensus       249 ~~a~~~~~l~~~~~~~~~~g~~~~~~  274 (315)
T PRK06196        249 QGAATQVWAATSPQLAGMGGLYCEDC  274 (315)
T ss_pred             HHHHHHHHHhcCCccCCCCCeEeCCC
Confidence            99999999997644334444454454

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=8.2e-34  Score=242.83  Aligned_cols=244  Identities=16%  Similarity=0.126  Sum_probs=184.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcC-CeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRG-CRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g-~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .+|++|||||++|||+++|++|+++| ++|++++ +.++.++..+++...   +.++.++.+|+++.+  +++++++++.
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~--~v~~~~~~~~   76 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMP---KDSYTIMHLDLGSLD--SVRQFVQQFR   76 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEEcCCCCHH--HHHHHHHHHH
Confidence            58899999999999999999999999 9999998 556666666665321   356788999999999  9999999998


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC-CCCeEEEEeccccccc-------
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK-AGGSIVFLTSIIGAER-------  153 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~iv~iss~~~~~~-------  153 (266)
                      +.++++|++|||||+..+..+....+.++|+.++++|+.+++.+++.++|+|.+.+ ..++||++||..+...       
T Consensus        77 ~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~  156 (314)
T TIGR01289        77 ESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVP  156 (314)
T ss_pred             HhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCC
Confidence            88899999999999743333344568899999999999999999999999998753 1489999999876321       


Q ss_pred             ------------------------CCCCCchhhHHhHHHHHHHHHHHHHHhC-CCCcEEEEEecCcc-cCCCcccccccH
Q 024517          154 ------------------------GLYPGAAAYGACAASIHQLVRTAAMEIG-KHKIRVNGIARGLH-LQDEYPIAVGQE  207 (266)
Q Consensus       154 ------------------------~~~~~~~~y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~pG~v-~t~~~~~~~~~~  207 (266)
                                              ..+.++.+|++||+++..+++.+++++. +.||+|++|+||.| .|++........
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~  236 (314)
T TIGR01289       157 PKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLF  236 (314)
T ss_pred             CcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHH
Confidence                                    0123467899999999999999999985 46899999999999 698875421111


Q ss_pred             HHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCcccccEEEEcC
Q 024517          208 RAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG  253 (266)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg  253 (266)
                      ................+++ +.++.++.++.+.....+|..+..++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~-~~a~~l~~~~~~~~~~~~g~~~~~~~  281 (314)
T TIGR01289       237 RTLFPPFQKYITKGYVSEE-EAGERLAQVVSDPKLKKSGVYWSWGN  281 (314)
T ss_pred             HHHHHHHHHHHhccccchh-hhhhhhHHhhcCcccCCCceeeecCC
Confidence            0000001111122345565 99999999877644345777665433

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-34  Score=234.60  Aligned_cols=226  Identities=23%  Similarity=0.386  Sum_probs=185.5

Q ss_pred             EEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCCC
Q 024517            9 LLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNL   87 (266)
Q Consensus         9 lItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~i   87 (266)
                      |||||+++||++++++|+++|++|++++ +.++.++..+.+..    +.++.++.+|+++.+  ++++++++    ++++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~--~~~~~~~~----~~~i   70 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG----GAPVRTAALDITDEA--AVDAFFAE----AGPF   70 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc----CCceEEEEccCCCHH--HHHHHHHh----cCCC
Confidence            6999999999999999999999999998 54555555544431    357889999999998  88888875    4789


Q ss_pred             CEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHHhHH
Q 024517           88 DAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA  167 (266)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~  167 (266)
                      |++|||+|.. ...++.+.+.+++++++++|+.+++.+++  .+.|.+   .++||++||..+..+  .+....|+++|+
T Consensus        71 d~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~---~g~iv~~ss~~~~~~--~~~~~~Y~~sK~  142 (230)
T PRK07041         71 DHVVITAADT-PGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIAP---GGSLTFVSGFAAVRP--SASGVLQGAINA  142 (230)
T ss_pred             CEEEECCCCC-CCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhcC---CeEEEEECchhhcCC--CCcchHHHHHHH
Confidence            9999999984 44567778899999999999999999999  455543   589999999988766  578899999999


Q ss_pred             HHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc--HHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCccc
Q 024517          168 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ--ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMT  245 (266)
Q Consensus       168 a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  245 (266)
                      +++.|+++++.|+..  ||+++++||+++|+++......  ...........|.++..+|+ |+|+.+.+|+++  .+++
T Consensus       143 a~~~~~~~la~e~~~--irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~--~~~~  217 (230)
T PRK07041        143 ALEALARGLALELAP--VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPE-DVANAILFLAAN--GFTT  217 (230)
T ss_pred             HHHHHHHHHHHHhhC--ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhcC--CCcC
Confidence            999999999999975  9999999999999986543221  22233344566777878887 999999999975  5899


Q ss_pred             ccEEEEcCCccc
Q 024517          246 GTTIYVDGAQSI  257 (266)
Q Consensus       246 G~~i~~dgG~~~  257 (266)
                      |+.+.+|||..+
T Consensus       218 G~~~~v~gg~~~  229 (230)
T PRK07041        218 GSTVLVDGGHAI  229 (230)
T ss_pred             CcEEEeCCCeec
Confidence            999999999764

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-34  Score=238.55  Aligned_cols=225  Identities=19%  Similarity=0.208  Sum_probs=186.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      +++|||||++|||++++++|+++|++|++++ +.+++++...++...   +.++.++.+|+++.+  ++.++++++.+.+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~--~~~~~~~~i~~~~   75 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA---GGDGFYQRCDVRDYS--QLTALAQACEEKW   75 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEEccCCCHH--HHHHHHHHHHHHc
Confidence            4799999999999999999999999999999 666666666666543   357889999999988  9999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHH
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA  164 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~  164 (266)
                      +++|++|||+|.. ...++.+.+.++++.++++|+.+++.+++.++|.|.+.+ .++||++||..+..+  .+....|++
T Consensus        76 ~~id~lI~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~--~~~~~~Y~~  151 (270)
T PRK05650         76 GGIDVIVNNAGVA-SGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAGLMQ--GPAMSSYNV  151 (270)
T ss_pred             CCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcCC--CCCchHHHH
Confidence            9999999999984 446777888999999999999999999999999998765 689999999988776  588899999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          165 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      +|+++++|+++++.|+.+.||+++.|+||+++|++........................+++ |+|+.++..+...
T Consensus       152 sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vA~~i~~~l~~~  226 (270)
T PRK05650        152 AKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAA-DIADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHH-HHHHHHHHHHhCC
Confidence            99999999999999999999999999999999998765332111111111111112234555 9999999998753

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=4.8e-34  Score=244.47  Aligned_cols=216  Identities=23%  Similarity=0.234  Sum_probs=173.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|++++||||++|||+++|++|+++|++|++++ +.++++++.+++.+.++ +.++..+.+|+++.    +.+.++++.+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~-~~~~~~~~~Dl~~~----~~~~~~~l~~  126 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYS-KTQIKTVVVDFSGD----IDEGVKRIKE  126 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCC-CcEEEEEEEECCCC----cHHHHHHHHH
Confidence            589999999999999999999999999999999 77788888888765443 24788899999852    2334444544


Q ss_pred             HhC--CCCEEEEcCCCCCC-CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           83 ILG--NLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        83 ~~g--~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      .++  ++|++|||||.... ..++.+.+.++++.++++|+.+++.+++.++|.|.+++ .|+||++||.++......|..
T Consensus       127 ~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~p~~  205 (320)
T PLN02780        127 TIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAAIVIPSDPLY  205 (320)
T ss_pred             HhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCCCccc
Confidence            444  46699999998433 24577889999999999999999999999999998776 699999999988642114778


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|++||+++++|+++++.|++++||+|++|+||+|+|++.....          ...   ...+|+ ++|+.++..+..
T Consensus       206 ~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~----------~~~---~~~~p~-~~A~~~~~~~~~  271 (320)
T PLN02780        206 AVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRR----------SSF---LVPSSD-GYARAALRWVGY  271 (320)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccC----------CCC---CCCCHH-HHHHHHHHHhCC
Confidence            999999999999999999999999999999999999999864210          000   123454 999999988853

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.1e-34  Score=222.34  Aligned_cols=186  Identities=17%  Similarity=0.191  Sum_probs=168.0

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++.|.++|||||++|||+++|++|.+.|-+|++++ |.+++++..++.       .......||+.|.+  ++++++++
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~-------p~~~t~v~Dv~d~~--~~~~lvew   71 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN-------PEIHTEVCDVADRD--SRRELVEW   71 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC-------cchheeeecccchh--hHHHHHHH
Confidence            899999999999999999999999999999999999 777777776664       56788899999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCC-CCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDP-LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      +.+.|+.++++|||||+.....-. .+...++.+.-+++|+.+|+++++.++|++.+++ .+.||++||..+..+  ...
T Consensus        72 Lkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~-~a~IInVSSGLafvP--m~~  148 (245)
T COG3967          72 LKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP-EATIINVSSGLAFVP--MAS  148 (245)
T ss_pred             HHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCC-CceEEEeccccccCc--ccc
Confidence            999999999999999985433222 2345677899999999999999999999999887 799999999988777  788


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD  198 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~  198 (266)
                      .+.||++|+|+++++.+|+..++..+|+|.-+.|..|+|+
T Consensus       149 ~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         149 TPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             cccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            9999999999999999999999999999999999999996

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=5.9e-34  Score=234.10  Aligned_cols=223  Identities=15%  Similarity=0.228  Sum_probs=179.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcC--CeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRG--CRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ++++||||++|||+++|++|+++|  ..|++..+.... +    .    . ..++.++++|+++.+  +++++.    +.
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~-~----~----~-~~~~~~~~~Dls~~~--~~~~~~----~~   64 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP-D----F----Q-HDNVQWHALDVTDEA--EIKQLS----EQ   64 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc-c----c----c-cCceEEEEecCCCHH--HHHHHH----Hh
Confidence            479999999999999999999986  455554432221 1    1    1 257889999999988  877743    45


Q ss_pred             hCCCCEEEEcCCCCCC-----CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc-CCCC
Q 024517           84 LGNLDAFVHCYTYEGK-----MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER-GLYP  157 (266)
Q Consensus        84 ~g~id~li~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~-~~~~  157 (266)
                      ++++|++|||+|....     ..++.+.+.++|+..+++|+.+++.+++.++|.|++.+ .++++++||..+... ...+
T Consensus        65 ~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~~~i~~iss~~~~~~~~~~~  143 (235)
T PRK09009         65 FTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE-SAKFAVISAKVGSISDNRLG  143 (235)
T ss_pred             cCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC-CceEEEEeecccccccCCCC
Confidence            6899999999998532     23566788899999999999999999999999998765 589999998765332 1145


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCC--CCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGK--HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~--~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      ++..|+++|++++.|+++++.|+.+  ++|+||+|+||+++|++..+.          ....|.+++.+|+ |+|+.+.+
T Consensus       144 ~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~~~-~~a~~~~~  212 (235)
T PRK09009        144 GWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF----------QQNVPKGKLFTPE-YVAQCLLG  212 (235)
T ss_pred             CcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch----------hhccccCCCCCHH-HHHHHHHH
Confidence            6789999999999999999999986  589999999999999986532          1234556667776 99999999


Q ss_pred             HccCCCCcccccEEEEcCCcc
Q 024517          236 LISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      ++++..++++|+.+.+|||..
T Consensus       213 l~~~~~~~~~g~~~~~~g~~~  233 (235)
T PRK09009        213 IIANATPAQSGSFLAYDGETL  233 (235)
T ss_pred             HHHcCChhhCCcEEeeCCcCC
Confidence            999988899999999999864

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-34  Score=238.42  Aligned_cols=224  Identities=20%  Similarity=0.184  Sum_probs=183.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .+|++|||||++|||++++++|+++|++|++++ +.++++.+.+.    .  +.++.++.+|+++.+  ++.++++++.+
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~----~--~~~~~~~~~D~~d~~--~~~~~~~~~~~   74 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL----H--PDRALARLLDVTDFD--AIDAVVADAEA   74 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh----c--CCCeeEEEccCCCHH--HHHHHHHHHHH
Confidence            578999999999999999999999999999998 44433332221    1  246888999999998  99999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhh
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY  162 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y  162 (266)
                      .++++|++|||||. ....++.+.+.++|++++++|+.+++.+++.++|+|++++ .++||++||..+..+  .++...|
T Consensus        75 ~~~~~d~vv~~ag~-~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~~~--~~~~~~Y  150 (277)
T PRK06180         75 TFGPIDVLVNNAGY-GHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGLIT--MPGIGYY  150 (277)
T ss_pred             HhCCCCEEEECCCc-cCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccccCC--CCCcchh
Confidence            99999999999998 4556777889999999999999999999999999998776 689999999988766  5788999


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-----cHHHHH------HHhhccCCCCCCCChhhHHH
Q 024517          163 GACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-----QERAVK------LVREAAPLHRWLDVKNDLAS  231 (266)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-----~~~~~~------~~~~~~~~~~~~~~~~dva~  231 (266)
                      +++|++++.++++++.++.+.|+++++|+||+++|++......     ......      ......+..++.+|+ |+++
T Consensus       151 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~  229 (277)
T PRK06180        151 CGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPA-KAAQ  229 (277)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHH-HHHH
Confidence            9999999999999999999999999999999999987432110     111111      111223445567776 9999


Q ss_pred             HHHHHccCC
Q 024517          232 TVIYLISDG  240 (266)
Q Consensus       232 ~~~~l~s~~  240 (266)
                      .+.++++..
T Consensus       230 ~~~~~l~~~  238 (277)
T PRK06180        230 AILAAVESD  238 (277)
T ss_pred             HHHHHHcCC
Confidence            999998754

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-34  Score=240.85  Aligned_cols=219  Identities=19%  Similarity=0.233  Sum_probs=180.7

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+.+++..+++...   +.++.++.+|++|.+  ++.+++++
T Consensus        36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~---~~~~~~~~~Dl~d~~--~v~~~~~~  110 (293)
T PRK05866         36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA---GGDAMAVPCDLSDLD--AVDALVAD  110 (293)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEccCCCHH--HHHHHHHH
Confidence            457889999999999999999999999999999999 666677776666543   357889999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCC--CHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCC
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP  157 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  157 (266)
                      +.+.++++|++|||||.. ...++.+.  +.++++..+++|+.+++.+++.++|+|.+.+ .++||++||..+... ..+
T Consensus       111 ~~~~~g~id~li~~AG~~-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~-~~p  187 (293)
T PRK05866        111 VEKRIGGVDILINNAGRS-IRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLSE-ASP  187 (293)
T ss_pred             HHHHcCCCCEEEECCCCC-CCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCC-CCC
Confidence            999999999999999984 33444332  4578999999999999999999999998776 689999999765432 146


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      ....|+++|+|+++|+++++.|+.++||++++|+||.|+|+++.....          ..+ ....+|+ ++|+.+...+
T Consensus       188 ~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~----------~~~-~~~~~pe-~vA~~~~~~~  255 (293)
T PRK05866        188 LFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKA----------YDG-LPALTAD-EAAEWMVTAA  255 (293)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccccc----------ccC-CCCCCHH-HHHHHHHHHH
Confidence            778999999999999999999999999999999999999998753210          001 1124555 9999998888


Q ss_pred             cC
Q 024517          238 SD  239 (266)
Q Consensus       238 s~  239 (266)
                      ..
T Consensus       256 ~~  257 (293)
T PRK05866        256 RT  257 (293)
T ss_pred             hc
Confidence            64

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=2.2e-33  Score=232.81  Aligned_cols=241  Identities=26%  Similarity=0.392  Sum_probs=196.3

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccc--cHHHHHHHhcccCCC-CCeEEEEEecCC-CchHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERR--LSSVAEKMMGSLKGG-QPVEVVGLDMEE-DREGAFDE   75 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~--~~~~~~~~~~~~~~~-~~~~~~~~D~~~-~~~~~v~~   75 (266)
                      |.+++|++|||||++|||+++|+.|+++|++|+++. +.+.  .+...+...   ..+ ..+.+..+|+++ .+  +++.
T Consensus         1 ~~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dvs~~~~--~v~~   75 (251)
T COG1028           1 MDLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK---EAGGGRAAAVAADVSDDEE--SVEA   75 (251)
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH---hcCCCcEEEEEecCCCCHH--HHHH
Confidence            578899999999999999999999999999988887 5443  333333332   112 268888899998 88  9999


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCC-CCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC
Q 024517           76 AVDKACQILGNLDAFVHCYTYEGKM-QDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG  154 (266)
Q Consensus        76 ~~~~~~~~~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~  154 (266)
                      +++.+.+.+|++|++|||||.. .. .++.+.+.++|+..+.+|+.+++.+++.+.|.|.+   . +||++||..+. + 
T Consensus        76 ~~~~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~---~-~Iv~isS~~~~-~-  148 (251)
T COG1028          76 LVAAAEEEFGRIDILVNNAGIA-GPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK---Q-RIVNISSVAGL-G-  148 (251)
T ss_pred             HHHHHHHHcCCCCEEEECCCCC-CCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh---C-eEEEECCchhc-C-
Confidence            9999999999999999999984 44 47888899999999999999999999988888873   3 99999999987 6 


Q ss_pred             CCCC-chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHH-HHHHhhccCCCCCCCChhhHHHH
Q 024517          155 LYPG-AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERA-VKLVREAAPLHRWLDVKNDLAST  232 (266)
Q Consensus       155 ~~~~-~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~  232 (266)
                       .+. +.+|++||+|+..|++.++.|+.+.||++++|+||++.|++.......... ........|..+...|. ++++.
T Consensus       149 -~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  226 (251)
T COG1028         149 -GPPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPE-EVAAA  226 (251)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcCCCCCCcCHH-HHHHH
Confidence             355 599999999999999999999999999999999999999988754332200 11122222555677777 99999


Q ss_pred             HHHHccCC-CCcccccEEEEcCCc
Q 024517          233 VIYLISDG-SRYMTGTTIYVDGAQ  255 (266)
Q Consensus       233 ~~~l~s~~-~~~~~G~~i~~dgG~  255 (266)
                      +.++.+.. ..+++|+.+.+|||.
T Consensus       227 ~~~~~~~~~~~~~~g~~~~~~~~~  250 (251)
T COG1028         227 VAFLASDEAASYITGQTLPVDGGL  250 (251)
T ss_pred             HHHHcCcchhccccCCEEEeCCCC
Confidence            99888663 678999999999986

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=1.6e-33  Score=233.48  Aligned_cols=231  Identities=19%  Similarity=0.277  Sum_probs=185.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      ++++||||++|||++++++|+++|++|++++ +.++++++.+.+      +.++.++.+|+++.+  +++++++++.+.+
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~~~~--~i~~~~~~~~~~~   72 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL------GDNLYIAQLDVRNRA--AIEEMLASLPAEW   72 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------ccceEEEEecCCCHH--HHHHHHHHHHHHc
Confidence            3689999999999999999999999999998 545444444333      247889999999998  9999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHH
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA  164 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~  164 (266)
                      +++|++|||+|......++.+.+.++|+.++++|+.+++.+++.++|+|.+.+ .+++|++||..+..+  .++...|++
T Consensus        73 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~--~~~~~~Y~~  149 (248)
T PRK10538         73 RNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWP--YAGGNVYGA  149 (248)
T ss_pred             CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccCCC--CCCCchhHH
Confidence            99999999999743345667788999999999999999999999999998765 589999999887665  578889999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccc-c-ccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCC
Q 024517          165 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA-V-GQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR  242 (266)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  242 (266)
                      +|++++.|++.++.++.++||+++.|.||.+.++++... . .........   .....+.+|+ |+|+.+.++++....
T Consensus       150 sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-dvA~~~~~l~~~~~~  225 (248)
T PRK10538        150 TKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKT---YQNTVALTPE-DVSEAVWWVATLPAH  225 (248)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhh---ccccCCCCHH-HHHHHHHHHhcCCCc
Confidence            999999999999999999999999999999985544221 1 111111111   1112335666 999999999987767


Q ss_pred             cccccEEEE
Q 024517          243 YMTGTTIYV  251 (266)
Q Consensus       243 ~~~G~~i~~  251 (266)
                      +.+++....
T Consensus       226 ~~~~~~~~~  234 (248)
T PRK10538        226 VNINTLEMM  234 (248)
T ss_pred             ccchhhccc
Confidence            777665433

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-33  Score=241.99  Aligned_cols=242  Identities=12%  Similarity=0.093  Sum_probs=184.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|+++||||++|||+++|++|+++|++|++++ +.++.++..+++....+ +.++.++.+|+++.+  +++++++++
T Consensus        11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~-~~~v~~~~~Dl~d~~--sv~~~~~~~   87 (313)
T PRK05854         11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVP-DAKLSLRALDLSSLA--SVAALGEQL   87 (313)
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC-CCceEEEEecCCCHH--HHHHHHHHH
Confidence            46899999999999999999999999999999999 66777777777765433 257889999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC------
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG------  154 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~------  154 (266)
                      .+.++++|++|||||....  +..+.+.++|+.++++|+.+++.+++.++|.|.+.  .++||++||.++..+.      
T Consensus        88 ~~~~~~iD~li~nAG~~~~--~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~~~~~~~~~~~~~  163 (313)
T PRK05854         88 RAEGRPIHLLINNAGVMTP--PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAARRGAINWDDL  163 (313)
T ss_pred             HHhCCCccEEEECCccccC--CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEechhhcCCCcCcccc
Confidence            9999999999999997432  33456778999999999999999999999999764  4899999998775431      


Q ss_pred             ----CCCCchhhHHhHHHHHHHHHHHHHHh--CCCCcEEEEEecCcccCCCcccccc----cHHHHHHHhh-ccCCCCCC
Q 024517          155 ----LYPGAAAYGACAASIHQLVRTAAMEI--GKHKIRVNGIARGLHLQDEYPIAVG----QERAVKLVRE-AAPLHRWL  223 (266)
Q Consensus       155 ----~~~~~~~y~~sK~a~~~~~~~la~e~--~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~-~~~~~~~~  223 (266)
                          .+++...|+.||+++..|++.+++++  ...||+||+|+||+|.|++......    .......... ......+.
T Consensus       164 ~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (313)
T PRK05854        164 NWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLV  243 (313)
T ss_pred             cccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhccccc
Confidence                13456789999999999999999864  4568999999999999998744211    0111111111 11111123


Q ss_pred             CChhhHHHHHHHHccCCCCcccccEEEE
Q 024517          224 DVKNDLASTVIYLISDGSRYMTGTTIYV  251 (266)
Q Consensus       224 ~~~~dva~~~~~l~s~~~~~~~G~~i~~  251 (266)
                      .++++.+...++++.... ..+|..+.-
T Consensus       244 ~~~~~ga~~~l~~a~~~~-~~~g~~~~~  270 (313)
T PRK05854        244 GTVESAILPALYAATSPD-AEGGAFYGP  270 (313)
T ss_pred             CCHHHHHHHhhheeeCCC-CCCCcEECC
Confidence            344488888888875432 235666544

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-33  Score=235.55  Aligned_cols=214  Identities=20%  Similarity=0.266  Sum_probs=177.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ++++|||||++|||++++++|+++|++|++++ +.+++++..+++...    .++.++.+|+++.+  ++.++++++.++
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~--~i~~~~~~~~~~   75 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA----ARVSVYAADVRDAD--ALAAAAADFIAA   75 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC----CeeEEEEcCCCCHH--HHHHHHHHHHHh
Confidence            47899999999999999999999999999999 655555555544321    27889999999998  999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhH
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG  163 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~  163 (266)
                      ++++|++|||+|...........+.++++.++++|+.+++.+++.++|.|.+.+ .++||++||..+..+  .+....|+
T Consensus        76 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~~~--~~~~~~Y~  152 (257)
T PRK07024         76 HGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGVRG--LPGAGAYS  152 (257)
T ss_pred             CCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCC--CCCCcchH
Confidence            999999999999743222223367899999999999999999999999998776 689999999988777  58888999


Q ss_pred             HhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          164 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      ++|++++.|+++++.|+.+.||++++|+||+++|++.....            .+.....+| +++++.+...+...
T Consensus       153 asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~------------~~~~~~~~~-~~~a~~~~~~l~~~  216 (257)
T PRK07024        153 ASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP------------YPMPFLMDA-DRFAARAARAIARG  216 (257)
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCC------------CCCCCccCH-HHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999998754211            111122344 49999999998654

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-34  Score=236.74  Aligned_cols=235  Identities=19%  Similarity=0.197  Sum_probs=187.0

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-c-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-E-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++|+++||||++|||++++++|+++|++|+++++ . +..+...+++...   +.++.++.+|+++++  ++.++++++
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~--~~~~~~~~~   78 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA---GGRASAVGADLTDEE--SVAALMDTA   78 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc---CCceEEEEcCCCCHH--HHHHHHHHH
Confidence            68999999999999999999999999999998874 3 2344455555432   356889999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccc-c--CCCC
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAE-R--GLYP  157 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~-~--~~~~  157 (266)
                      .+.++++|++|||||.. ...   .   .+++..+++|+.+++.+++.+.|+|.+   .+++|++||..+.. +  ...+
T Consensus        79 ~~~~~~~d~vi~~ag~~-~~~---~---~~~~~~~~vn~~~~~~l~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~~~  148 (248)
T PRK07806         79 REEFGGLDALVLNASGG-MES---G---MDEDYAMRLNRDAQRNLARAALPLMPA---GSRVVFVTSHQAHFIPTVKTMP  148 (248)
T ss_pred             HHhCCCCcEEEECCCCC-CCC---C---CCcceeeEeeeHHHHHHHHHHHhhccC---CceEEEEeCchhhcCccccCCc
Confidence            99999999999999863 211   1   124678899999999999999999854   47999999965532 1  1135


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--cHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      .+..|+++|++++.+++.++.+++..|||+|.|.||.+.|++......  .....  .....|.+++.+|+ |+++.+.+
T Consensus       149 ~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-dva~~~~~  225 (248)
T PRK07806        149 EYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAI--EARREAAGKLYTVS-EFAAEVAR  225 (248)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHH--HHHHhhhcccCCHH-HHHHHHHH
Confidence            577899999999999999999999999999999999999986543221  11111  12345777889998 99999999


Q ss_pred             HccCCCCcccccEEEEcCCccc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +++.  .+++|+.+.+|||...
T Consensus       226 l~~~--~~~~g~~~~i~~~~~~  245 (248)
T PRK07806        226 AVTA--PVPSGHIEYVGGADYF  245 (248)
T ss_pred             Hhhc--cccCccEEEecCccce
Confidence            9974  5789999999999754

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-33  Score=237.49  Aligned_cols=184  Identities=23%  Similarity=0.246  Sum_probs=161.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .+|++|||||++|||++++++|+++|++|++++ +.+.+++    +..     ..+.++.+|++|.+  +++++++++.+
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~----l~~-----~~~~~~~~Dl~d~~--~~~~~~~~~~~   71 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAA----LEA-----EGLEAFQLDYAEPE--SIAALVAQVLE   71 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH----HHH-----CCceEEEccCCCHH--HHHHHHHHHHH
Confidence            468999999999999999999999999999998 4443332    221     24678899999988  99999999877


Q ss_pred             Hh-CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           83 IL-GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        83 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      .+ +++|++|||||. ....++.+.+.++++.++++|+.+++.+++.++|.|.+.+ .++||++||..+..+  .+....
T Consensus        72 ~~~g~id~li~~Ag~-~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~--~~~~~~  147 (277)
T PRK05993         72 LSGGRLDALFNNGAY-GQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGLVP--MKYRGA  147 (277)
T ss_pred             HcCCCccEEEECCCc-CCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhcCC--CCccch
Confidence            76 689999999998 4556777889999999999999999999999999998776 689999999988766  578899


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccc
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI  202 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~  202 (266)
                      |+++|++++.|+++++.|+.+.||+++.|+||+++|++...
T Consensus       148 Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~  188 (277)
T PRK05993        148 YNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRAN  188 (277)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhH
Confidence            99999999999999999999999999999999999998754

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.9e-33  Score=228.92  Aligned_cols=235  Identities=23%  Similarity=0.331  Sum_probs=190.7

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|+++||||+++||.++++.|+++|++|++++ +.++.++..+.+...    .++.++.+|+++++  ++++++++
T Consensus         1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~--~~~~~~~~   74 (238)
T PRK05786          1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY----GNIHYVVGDVSSTE--SARNVIEK   74 (238)
T ss_pred             CCcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCeEEEECCCCCHH--HHHHHHHH
Confidence            789999999999999999999999999999999998 444444443444321    36788999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +...++++|.+++++|.. ...++.  +.++++.++++|+.+++.+.+.++|.|.+   ++++|++||..+.... .+..
T Consensus        75 ~~~~~~~id~ii~~ag~~-~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~~~~-~~~~  147 (238)
T PRK05786         75 AAKVLNAIDGLVVTVGGY-VEDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE---GSSIVLVSSMSGIYKA-SPDQ  147 (238)
T ss_pred             HHHHhCCCCEEEEcCCCc-CCCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc---CCEEEEEecchhcccC-CCCc
Confidence            988889999999999863 223332  33889999999999999999999999865   5799999998764432 4677


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCC-CCCCChhhHHHHHHHHcc
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH-RWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s  238 (266)
                      ..|+++|++++.+++.++.++...||+++.|+||++.|++...    ..+ .   ...+.. +..++ +|+++.+.++++
T Consensus       148 ~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~----~~~-~---~~~~~~~~~~~~-~~va~~~~~~~~  218 (238)
T PRK05786        148 LSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE----RNW-K---KLRKLGDDMAPP-EDFAKVIIWLLT  218 (238)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch----hhh-h---hhccccCCCCCH-HHHHHHHHHHhc
Confidence            8899999999999999999999889999999999999987432    111 1   111222 23444 499999999999


Q ss_pred             CCCCcccccEEEEcCCccc
Q 024517          239 DGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~~  257 (266)
                      +...+++|+.+.+|||..+
T Consensus       219 ~~~~~~~g~~~~~~~~~~~  237 (238)
T PRK05786        219 DEADWVDGVVIPVDGGARL  237 (238)
T ss_pred             ccccCccCCEEEECCcccc
Confidence            8888999999999999765

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=4.4e-33  Score=231.39  Aligned_cols=243  Identities=22%  Similarity=0.335  Sum_probs=199.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +|++|||||+++||++++++|+++|++|++++ +.+..+++.+++...   +.++.++.+|+++.+  +++++++++.+.
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~~~~~   75 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA---GGSVIYLVADVTKED--EIADMIAAAAAE   75 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEECCCCCHH--HHHHHHHHHHHh
Confidence            47899999999999999999999999999999 555555555555432   357889999999998  999999999998


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhH
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG  163 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~  163 (266)
                      ++++|++||+++.. ...+..+.+.++++.+++.|+.+++.+++.+++.|++.+ .+++|++||..+..+  .+....|+
T Consensus        76 ~~~~d~vi~~a~~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~--~~~~~~y~  151 (255)
T TIGR01963        76 FGGLDILVNNAGIQ-HVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGLVA--SPFKSAYV  151 (255)
T ss_pred             cCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcCC--CCCCchhH
Confidence            99999999999974 335556678899999999999999999999999998765 579999999877665  57789999


Q ss_pred             HhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc----------HHHHHHHhhccCCCCCCCChhhHHHHH
Q 024517          164 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ----------ERAVKLVREAAPLHRWLDVKNDLASTV  233 (266)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~dva~~~  233 (266)
                      ++|++++.+++.++.++.+.+|+++.++||.+.|++.......          ...........+...+.+++ |+|+.+
T Consensus       152 ~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~a~~~  230 (255)
T TIGR01963       152 AAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVD-EVAETA  230 (255)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHH-HHHHHH
Confidence            9999999999999999988899999999999999875332110          01111122233445567777 999999


Q ss_pred             HHHccCCCCcccccEEEEcCCccc
Q 024517          234 IYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       234 ~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      ++++++....++|+.+.+|||.++
T Consensus       231 ~~~~~~~~~~~~g~~~~~~~g~~~  254 (255)
T TIGR01963       231 LFLASDAAAGITGQAIVLDGGWTA  254 (255)
T ss_pred             HHHcCccccCccceEEEEcCcccc
Confidence            999987667889999999999754

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-33  Score=240.07  Aligned_cols=242  Identities=17%  Similarity=0.135  Sum_probs=187.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.++.++..+++.+..+ +.++.++.+|+++.+  +++++++++
T Consensus        13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~d~~--~v~~~~~~~   89 (306)
T PRK06197         13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATP-GADVTLQELDLTSLA--SVRAAADAL   89 (306)
T ss_pred             cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC-CCceEEEECCCCCHH--HHHHHHHHH
Confidence            56899999999999999999999999999999998 55666666666654322 357889999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC------
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG------  154 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~------  154 (266)
                      .+.++++|++|||||...+   ....+.++++..+++|+.+++.+++.++|.|++.+ .++||++||..+....      
T Consensus        90 ~~~~~~iD~li~nAg~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~  165 (306)
T PRK06197         90 RAAYPRIDLLINNAGVMYT---PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAIHFDD  165 (306)
T ss_pred             HhhCCCCCEEEECCccccC---CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCCCccc
Confidence            9999999999999997432   23456678999999999999999999999998765 5899999998654311      


Q ss_pred             -----CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEE--ecCcccCCCcccccccHHHHHHHhhccCCCCCCCChh
Q 024517          155 -----LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI--ARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKN  227 (266)
Q Consensus       155 -----~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v--~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (266)
                           .+++...|+++|++++.|++.+++++++.|++++++  +||+|.|++......  .....+....|  .+..+++
T Consensus       166 ~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~--~~~~~~~~~~~--~~~~~~~  241 (306)
T PRK06197        166 LQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPR--ALRPVATVLAP--LLAQSPE  241 (306)
T ss_pred             cCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcH--HHHHHHHHHHh--hhcCCHH
Confidence                 134567899999999999999999998888877655  699999998765321  11111211122  2345554


Q ss_pred             hHHHHHHHHccCCCCcccccEEEEcCCc
Q 024517          228 DLASTVIYLISDGSRYMTGTTIYVDGAQ  255 (266)
Q Consensus       228 dva~~~~~l~s~~~~~~~G~~i~~dgG~  255 (266)
                      +.+...++++.. ....+|..+..||+.
T Consensus       242 ~g~~~~~~~~~~-~~~~~g~~~~~~~~~  268 (306)
T PRK06197        242 MGALPTLRAATD-PAVRGGQYYGPDGFG  268 (306)
T ss_pred             HHHHHHHHHhcC-CCcCCCeEEccCccc
Confidence            677777776654 356789888877654

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-33  Score=233.00  Aligned_cols=221  Identities=23%  Similarity=0.311  Sum_probs=185.3

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |+++++++|||||+++||++++++|+++|++|++++ +.++.++...++. .   +.++.++.+|++|.+  +++++++.
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~---~~~~~~~~~D~~d~~--~~~~~~~~   74 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLP-Y---PGRHRWVVADLTSEA--GREAVLAR   74 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHh-c---CCceEEEEccCCCHH--HHHHHHHH
Confidence            889999999999999999999999999999999999 5556666555552 1   357899999999999  99999998


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+ ++++|++|||||.. ...++.+.+.++++..+++|+.+++.+++.++|+|.+++ .+.++++||..+..+  .++.
T Consensus        75 ~~~-~~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~--~~~~  149 (263)
T PRK09072         75 ARE-MGGINVLINNAGVN-HFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-SAMVVNVGSTFGSIG--YPGY  149 (263)
T ss_pred             HHh-cCCCCEEEECCCCC-CccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEecChhhCcC--CCCc
Confidence            876 78999999999984 556777889999999999999999999999999998765 589999999988766  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|+++..++++++.++.+.||+|+.|+||+++|++.....      ....... ..+..+++ |+|+.+.++++.
T Consensus       150 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~------~~~~~~~-~~~~~~~~-~va~~i~~~~~~  221 (263)
T PRK09072        150 ASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAV------QALNRAL-GNAMDDPE-DVAAAVLQAIEK  221 (263)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhc------ccccccc-cCCCCCHH-HHHHHHHHHHhC
Confidence            999999999999999999999999999999999999998754321      1111111 12345666 999999999975


Q ss_pred             C
Q 024517          240 G  240 (266)
Q Consensus       240 ~  240 (266)
                      .
T Consensus       222 ~  222 (263)
T PRK09072        222 E  222 (263)
T ss_pred             C
Confidence            4

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=8.5e-33  Score=233.81  Aligned_cols=193  Identities=15%  Similarity=0.145  Sum_probs=169.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.+.+++..+++...   +.++.++.+|++|.+  +++++++++
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~d~~--~~~~~~~~~   77 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ---GAEVLGVRTDVSDAA--QVEALADAA   77 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc---CCeEEEEECCCCCHH--HHHHHHHHH
Confidence            36789999999999999999999999999999999 555666666665432   357888999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCC-----CeEEEEecccccccCC
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAG-----GSIVFLTSIIGAERGL  155 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-----g~iv~iss~~~~~~~~  155 (266)
                      .+.++++|++|||||.. ...++.+.+.++|+.++++|+.+++.+++.++|+|.+....     +++|++||..+..+  
T Consensus        78 ~~~~g~id~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--  154 (287)
T PRK06194         78 LERFGAVHLLFNNAGVG-AGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLA--  154 (287)
T ss_pred             HHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC--
Confidence            99999999999999984 44667788999999999999999999999999999876532     79999999988776  


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCC--CCcEEEEEecCcccCCCccc
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGK--HKIRVNGIARGLHLQDEYPI  202 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~--~~i~v~~v~pG~v~t~~~~~  202 (266)
                      .+....|+++|++++.|+++++.++..  .+||++.++||++.|++...
T Consensus       155 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~  203 (287)
T PRK06194        155 PPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS  203 (287)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc
Confidence            578889999999999999999999874  47999999999999998754

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=1.6e-32  Score=225.83  Aligned_cols=236  Identities=25%  Similarity=0.389  Sum_probs=198.1

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEe-cc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      +||||++++||.+++++|+++|++|++++ +. +..++..+.+...   +.++.++.+|+++.+  +++++++++.+.++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~~~~~~~   75 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY---GVKALGVVCDVSDRE--DVKAVVEEIEEELG   75 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc---CCceEEEEecCCCHH--HHHHHHHHHHHHhC
Confidence            58999999999999999999999999988 33 3344444444432   356889999999998  99999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHHh
Q 024517           86 NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGAC  165 (266)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~s  165 (266)
                      ++|++||++|.. ...++.+.+.++++..+++|+.+++.+.+.+.+++.+.+ .++++++||..+..+  .+....|+++
T Consensus        76 ~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~g--~~~~~~y~~~  151 (239)
T TIGR01830        76 PIDILVNNAGIT-RDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-SGRIINISSVVGLMG--NAGQANYAAS  151 (239)
T ss_pred             CCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEECCccccCC--CCCCchhHHH
Confidence            999999999973 445566778899999999999999999999999987655 589999999888776  5788999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCccc
Q 024517          166 AASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMT  245 (266)
Q Consensus       166 K~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  245 (266)
                      |++++.+++.++.++...|++++.+.||++.|++....  ............|..++.+++ |+++.+++++++...+.+
T Consensus       152 k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~~~~~~~~~~~  228 (239)
T TIGR01830       152 KAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKL--SEKVKKKILSQIPLGRFGTPE-EVANAVAFLASDEASYIT  228 (239)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhc--ChHHHHHHHhcCCcCCCcCHH-HHHHHHHHHhCcccCCcC
Confidence            99999999999999988899999999999999875442  233333444566777778777 999999999987777899


Q ss_pred             ccEEEEcCCc
Q 024517          246 GTTIYVDGAQ  255 (266)
Q Consensus       246 G~~i~~dgG~  255 (266)
                      |+++.+|+|.
T Consensus       229 g~~~~~~~g~  238 (239)
T TIGR01830       229 GQVIHVDGGM  238 (239)
T ss_pred             CCEEEeCCCc
Confidence            9999999985

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-33  Score=233.29  Aligned_cols=219  Identities=21%  Similarity=0.229  Sum_probs=180.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++++++||||++|||++++++|+++|++|+++++ .++.+.           ..++.++.+|++|++  +++++++++.+
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-----------~~~~~~~~~D~~d~~--~~~~~~~~~~~   69 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-----------IPGVELLELDVTDDA--SVQAAVDEVIA   69 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-----------cCCCeeEEeecCCHH--HHHHHHHHHHH
Confidence            5789999999999999999999999999999884 332211           146789999999999  99999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhh
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY  162 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y  162 (266)
                      .++++|++|||||. ....++.+.+.++++.++++|+.+++.+++.++|+|++++ .++||++||..+..+  .+....|
T Consensus        70 ~~g~~d~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~--~~~~~~Y  145 (270)
T PRK06179         70 RAGRIDVLVNNAGV-GLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGFLP--APYMALY  145 (270)
T ss_pred             hCCCCCEEEECCCC-CCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccccCC--CCCccHH
Confidence            99999999999998 4556777889999999999999999999999999998876 689999999988766  5788899


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccH-------HHHHHHh--hccCCCCCCCChhhHHHHH
Q 024517          163 GACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE-------RAVKLVR--EAAPLHRWLDVKNDLASTV  233 (266)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~-------~~~~~~~--~~~~~~~~~~~~~dva~~~  233 (266)
                      +++|++++.|++.++.|+++.||+++.|+||+++|++........       .......  -..+..+..+|+ ++++.+
T Consensus       146 ~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~  224 (270)
T PRK06179        146 AASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPE-VVADTV  224 (270)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHH-HHHHHH
Confidence            999999999999999999999999999999999999865432110       0000000  112334445565 999999


Q ss_pred             HHHccCC
Q 024517          234 IYLISDG  240 (266)
Q Consensus       234 ~~l~s~~  240 (266)
                      +.+++..
T Consensus       225 ~~~~~~~  231 (270)
T PRK06179        225 VKAALGP  231 (270)
T ss_pred             HHHHcCC
Confidence            9998754

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-32  Score=232.24  Aligned_cols=242  Identities=16%  Similarity=0.220  Sum_probs=191.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      |++|++|||||+++||+++++.|+++|++|++++ +.+..++..+++... ..+.++.++.+|++|++  ++++ ++++.
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~--~~~~-~~~~~   76 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQL-NLQQNIKVQQLDVTDQN--SIHN-FQLVL   76 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhc-CCCCceeEEecCCCCHH--HHHH-HHHHH
Confidence            3589999999999999999999999999999998 555555555554432 11257889999999998  9999 99998


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.++++|++|||+|.. ....+.+.+.+++++.+++|+.+++.+++.++|.|++.+ .+++|++||..+..+  .++...
T Consensus        77 ~~~~~id~vv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~--~~~~~~  152 (280)
T PRK06914         77 KEIGRIDLLVNNAGYA-NGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGRVG--FPGLSP  152 (280)
T ss_pred             HhcCCeeEEEECCccc-ccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECcccccCC--CCCCch
Confidence            8899999999999974 445667788899999999999999999999999998766 689999999877766  578889


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--------c---HHHHHHHhh--ccCCCCCCCChhh
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--------Q---ERAVKLVRE--AAPLHRWLDVKND  228 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--------~---~~~~~~~~~--~~~~~~~~~~~~d  228 (266)
                      |+++|++++.|+++++.++.+.||+++.++||+++|+++.....        .   .........  ..+..++.+++ |
T Consensus       153 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d  231 (280)
T PRK06914        153 YVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPI-D  231 (280)
T ss_pred             hHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHH-H
Confidence            99999999999999999999999999999999999997653211        0   011111111  12345667777 9


Q ss_pred             HHHHHHHHccCCCCcccccEEEEcCCcc
Q 024517          229 LASTVIYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       229 va~~~~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      +|+.+++++++....   ..+.++.+..
T Consensus       232 va~~~~~~~~~~~~~---~~~~~~~~~~  256 (280)
T PRK06914        232 VANLIVEIAESKRPK---LRYPIGKGVK  256 (280)
T ss_pred             HHHHHHHHHcCCCCC---cccccCCchH
Confidence            999999999865422   3455554443

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-32  Score=227.75  Aligned_cols=214  Identities=18%  Similarity=0.251  Sum_probs=174.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcC-CeEEEEe-cccc-cHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRG-CRLVLVG-NERR-LSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g-~~v~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++|++|||||++|||+++|++|+++| ++|++++ +.++ +++..+++....  +.++.++.+|++|.+  ++.++++++
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~--~~~v~~~~~D~~~~~--~~~~~~~~~   82 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG--ASSVEVIDFDALDTD--SHPKVIDAA   82 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC--CCceEEEEecCCChH--HHHHHHHHH
Confidence            67899999999999999999999995 8999998 5554 677777775431  237899999999988  999999988


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+ ++++|++|||+|........ ..+.++..+.+++|+.+++.+++.++|.|.+++ .++|+++||..+..+  .++..
T Consensus        83 ~~-~g~id~li~~ag~~~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~g~~~--~~~~~  157 (253)
T PRK07904         83 FA-GGDVDVAIVAFGLLGDAEEL-WQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVAGERV--RRSNF  157 (253)
T ss_pred             Hh-cCCCCEEEEeeecCCchhhc-ccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechhhcCC--CCCCc
Confidence            76 58999999999884332211 124455678899999999999999999998876 699999999987655  46778


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|++||+++.+|+++++.|+.++||+++.|+||+++|++.....             +.....+++ |+|+.++..+.+.
T Consensus       158 ~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~-------------~~~~~~~~~-~~A~~i~~~~~~~  223 (253)
T PRK07904        158 VYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAK-------------EAPLTVDKE-DVAKLAVTAVAKG  223 (253)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCC-------------CCCCCCCHH-HHHHHHHHHHHcC
Confidence            89999999999999999999999999999999999998764321             011124555 9999999999654

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.8e-32  Score=226.22  Aligned_cols=228  Identities=20%  Similarity=0.271  Sum_probs=183.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++.|+++||||+++||++++++|+++|++|++++ +.+.+++..+++...   +.++.++.+|+++.+  ++.++++++.
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~~~~~~~~~~   82 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD---GGEAVAFPLDVTDPD--SVKSFVAQAE   82 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEECCCCCHH--HHHHHHHHHH
Confidence            4568999999999999999999999999999888 555555555555432   347888999999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.++++|++|||||.. ...+..+.+.++++..+++|+.+++.+++.++|.|.++. .++||++||..+..+  .++...
T Consensus        83 ~~~~~id~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~~~~--~~~~~~  158 (274)
T PRK07775         83 EALGEIEVLVSGAGDT-YFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVALRQ--RPHMGA  158 (274)
T ss_pred             HhcCCCCEEEECCCcC-CCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHhcCC--CCCcch
Confidence            9899999999999974 445666788899999999999999999999999998765 689999999877665  467789


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccH--HHHHHHhh--ccCCCCCCCChhhHHHHHHHHc
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE--RAVKLVRE--AAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      |+++|++++.+++.++.++.+.||++++|+||+++|++........  ........  ..+..++..++ |+|+++++++
T Consensus       159 Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~a~~~~~  237 (274)
T PRK07775        159 YGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRAS-DLARAITFVA  237 (274)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHH-HHHHHHHHHh
Confidence            9999999999999999999888999999999999998643321110  11111111  11233466776 9999999999


Q ss_pred             cCC
Q 024517          238 SDG  240 (266)
Q Consensus       238 s~~  240 (266)
                      +..
T Consensus       238 ~~~  240 (274)
T PRK07775        238 ETP  240 (274)
T ss_pred             cCC
Confidence            753

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=4.8e-32  Score=232.92  Aligned_cols=243  Identities=13%  Similarity=0.123  Sum_probs=182.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |.+++|++|||||++|||++++++|+++|++|++++ +.++.++..+++...   +.++.++.+|+++.+  ++++++++
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~--~v~~~~~~   76 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP---PDSYTIIHIDLGDLD--SVRRFVDD   76 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc---CCceEEEEecCCCHH--HHHHHHHH
Confidence            356899999999999999999999999999999998 556666666666321   357889999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCC-CCeEEEEeccccccc-----
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA-GGSIVFLTSIIGAER-----  153 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~iv~iss~~~~~~-----  153 (266)
                      +.+.++++|++|||||+.....+....+.++++..+++|+.+++.+++.++|.|++.+. .++||++||......     
T Consensus        77 ~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~  156 (322)
T PRK07453         77 FRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGK  156 (322)
T ss_pred             HHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCc
Confidence            88777889999999997433233446788999999999999999999999999987652 269999999754220     


Q ss_pred             ----------------------------CCCCCchhhHHhHHHHHHHHHHHHHHhC-CCCcEEEEEecCcc-cCCCcccc
Q 024517          154 ----------------------------GLYPGAAAYGACAASIHQLVRTAAMEIG-KHKIRVNGIARGLH-LQDEYPIA  203 (266)
Q Consensus       154 ----------------------------~~~~~~~~y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~pG~v-~t~~~~~~  203 (266)
                                                  .++.+..+|+.||.+.+.+++.+++++. ..||++++|+||.| .|++.+..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~  236 (322)
T PRK07453        157 IPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNT  236 (322)
T ss_pred             cCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccC
Confidence                                        0122356899999999999999999995 46899999999999 58876543


Q ss_pred             cccHH-HHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCcccccEEE
Q 024517          204 VGQER-AVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIY  250 (266)
Q Consensus       204 ~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  250 (266)
                      ..... ....+. ........+++ +.++.+++++.+.....+|..+.
T Consensus       237 ~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~G~y~~  282 (322)
T PRK07453        237 PPLFQKLFPWFQ-KNITGGYVSQE-LAGERVAQVVADPEFAQSGVHWS  282 (322)
T ss_pred             CHHHHHHHHHHH-HHHhhceecHH-HHhhHHHHhhcCcccCCCCceee
Confidence            21111 111111 11112234554 77777888776544456887775

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-32  Score=225.55  Aligned_cols=218  Identities=19%  Similarity=0.195  Sum_probs=180.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH-
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI-   83 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~-   83 (266)
                      |++|||||++|||++++++|+++|++|++++ +.+..++..+.+.     +.++.++.+|+++.+  ++.++++.+.+. 
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~--~v~~~~~~~~~~~   74 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG-----AGNAWTGALDVTDRA--AWDAALADFAAAT   74 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc-----CCceEEEEecCCCHH--HHHHHHHHHHHHc
Confidence            6899999999999999999999999999998 5555555544432     357899999999998  999999988776 


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhH
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG  163 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~  163 (266)
                      ++++|++|||||.. ...++.+.+.++++.++++|+.+++.+++.+.++|++++ .++||++||..+..+  .+....|+
T Consensus        75 ~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~--~~~~~~Y~  150 (260)
T PRK08267         75 GGRLDVLFNNAGIL-RGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSASAIYG--QPGLAVYS  150 (260)
T ss_pred             CCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchhhCcC--CCCchhhH
Confidence            78999999999984 446677788999999999999999999999999998766 689999999988777  57888999


Q ss_pred             HhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          164 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      .+|++++.|+++++.++.+.||++++|.||+++|++........ ..... ..  .....+++ |+++.++.++..
T Consensus       151 ~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~-~~~~~-~~--~~~~~~~~-~va~~~~~~~~~  221 (260)
T PRK08267        151 ATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEV-DAGST-KR--LGVRLTPE-DVAEAVWAAVQH  221 (260)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchh-hhhhH-hh--ccCCCCHH-HHHHHHHHHHhC
Confidence            99999999999999999999999999999999999876421111 11111 11  12234564 999999999854

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.1e-32  Score=221.92  Aligned_cols=219  Identities=24%  Similarity=0.355  Sum_probs=184.4

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++++++||||+++||++++++|+++|++|++++ +.++.++..+++...   +.++.++.+|+++++  ++.++++++.
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~~~   79 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY---GVKVVIATADVSDYE--EVTAAIEQLK   79 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh---CCeEEEEECCCCCHH--HHHHHHHHHH
Confidence            6789999999999999999999999999999999 555566666666432   357889999999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.++++|++|||+|.. ...++.+.+.++|+..+++|+.+++.+++.+.|+|.+.+ .+++|++||..+..+  .+....
T Consensus        80 ~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~--~~~~~~  155 (239)
T PRK07666         80 NELGSIDILINNAGIS-KFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINISSTAGQKG--AAVTSA  155 (239)
T ss_pred             HHcCCccEEEEcCccc-cCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEEcchhhccC--CCCCcc
Confidence            9999999999999983 445677788899999999999999999999999998765 689999999988776  577889


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      |+++|+++..+++.++.++.+.||+++.|.||.+.|++.......        ...| ....+++ |+++.+..+++..
T Consensus       156 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--------~~~~-~~~~~~~-~~a~~~~~~l~~~  224 (239)
T PRK07666        156 YSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLT--------DGNP-DKVMQPE-DLAEFIVAQLKLN  224 (239)
T ss_pred             hHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccc--------ccCC-CCCCCHH-HHHHHHHHHHhCC
Confidence            999999999999999999999999999999999999976432100        1112 2334555 9999999999754

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=7.6e-32  Score=209.93  Aligned_cols=227  Identities=19%  Similarity=0.247  Sum_probs=184.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHc-CCeEEEEe-c-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKR-GCRLVLVG-N-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~-g~~v~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      -|.++||||++|||..++++|.+. |-.+++.. | ++..   .++++.....-.+++++++|++..+  +++++++++.
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a---~~~l~~k~~~d~rvHii~Ldvt~de--S~~~~~~~V~   77 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA---ATELALKSKSDSRVHIIQLDVTCDE--SIDNFVQEVE   77 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh---hHHHHHhhccCCceEEEEEecccHH--HHHHHHHHHH
Confidence            566999999999999999999977 55666555 4 4443   3333332222369999999999998  9999999999


Q ss_pred             HH--hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC----------CCCeEEEEeccc
Q 024517           82 QI--LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK----------AGGSIVFLTSII  149 (266)
Q Consensus        82 ~~--~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----------~~g~iv~iss~~  149 (266)
                      +-  ...+|++|||||+..+.......+.+.|-+.+++|..+++.+.|+++|++++..          ....|||+||..
T Consensus        78 ~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~  157 (249)
T KOG1611|consen   78 KIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSA  157 (249)
T ss_pred             hhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccc
Confidence            87  457999999999977777777788899999999999999999999999997743          135899999988


Q ss_pred             ccccCC-CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhh
Q 024517          150 GAERGL-YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKND  228 (266)
Q Consensus       150 ~~~~~~-~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  228 (266)
                      +..++. ..+..+|.+||+|++.|+|+++.|+++.+|-|.++|||||.|+|....                 ...+++ |
T Consensus       158 ~s~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~-----------------a~ltve-e  219 (249)
T KOG1611|consen  158 GSIGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKK-----------------AALTVE-E  219 (249)
T ss_pred             cccCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCC-----------------cccchh-h
Confidence            865542 346899999999999999999999999999999999999999998632                 124565 7


Q ss_pred             HHHHHHHHccCCCCcccccEEEEcCC
Q 024517          229 LASTVIYLISDGSRYMTGTTIYVDGA  254 (266)
Q Consensus       229 va~~~~~l~s~~~~~~~G~~i~~dgG  254 (266)
                      .+..++..+..-...-+|..|..|+-
T Consensus       220 Sts~l~~~i~kL~~~hnG~ffn~dlt  245 (249)
T KOG1611|consen  220 STSKLLASINKLKNEHNGGFFNRDGT  245 (249)
T ss_pred             hHHHHHHHHHhcCcccCcceEccCCC
Confidence            78777777776667788999888864

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-32  Score=217.20  Aligned_cols=197  Identities=18%  Similarity=0.284  Sum_probs=165.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      ++|||||++|||++++++|+++ ++|+++++...                   .+.||+++.+  ++++++++    +++
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~--~~~~~~~~----~~~   55 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPA--SIRALFEK----VGK   55 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChH--HHHHHHHh----cCC
Confidence            6999999999999999999999 99999874321                   3679999988  88888765    478


Q ss_pred             CCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHHhH
Q 024517           87 LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACA  166 (266)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK  166 (266)
                      +|++|||+|. ....++.+.+.++|++.+++|+.+++++.+.+.|+|.+   .++|+++||..+..+  .++...|+++|
T Consensus        56 id~lv~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~iss~~~~~~--~~~~~~Y~~sK  129 (199)
T PRK07578         56 VDAVVSAAGK-VHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND---GGSFTLTSGILSDEP--IPGGASAATVN  129 (199)
T ss_pred             CCEEEECCCC-CCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCeEEEEcccccCCC--CCCchHHHHHH
Confidence            9999999997 45567778889999999999999999999999999975   589999999888766  58889999999


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCcccc
Q 024517          167 ASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG  246 (266)
Q Consensus       167 ~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  246 (266)
                      +++++|+++++.|+ ++||++|+|+||+++|++...           ....|.....+++ |+|+.+..+++.   ..+|
T Consensus       130 ~a~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~-----------~~~~~~~~~~~~~-~~a~~~~~~~~~---~~~g  193 (199)
T PRK07578        130 GALEGFVKAAALEL-PRGIRINVVSPTVLTESLEKY-----------GPFFPGFEPVPAA-RVALAYVRSVEG---AQTG  193 (199)
T ss_pred             HHHHHHHHHHHHHc-cCCeEEEEEcCCcccCchhhh-----------hhcCCCCCCCCHH-HHHHHHHHHhcc---ceee
Confidence            99999999999999 889999999999999876311           1112333445565 999999999964   5899


Q ss_pred             cEEEE
Q 024517          247 TTIYV  251 (266)
Q Consensus       247 ~~i~~  251 (266)
                      +.|.+
T Consensus       194 ~~~~~  198 (199)
T PRK07578        194 EVYKV  198 (199)
T ss_pred             EEecc
Confidence            98875

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-31  Score=221.32  Aligned_cols=215  Identities=22%  Similarity=0.255  Sum_probs=180.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +|+++||||++|||++++++|+++|++|++++ +.++.+++.+.+....+ +.++.++.+|+++.+  ++.++++++.+.
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~--~~~~~~~~~~~~   78 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYP-GIKVAVAALDVNDHD--QVFEVFAEFRDE   78 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCC-CceEEEEEcCCCCHH--HHHHHHHHHHHH
Confidence            68999999999999999999999999999999 66666666666654332 357899999999998  999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCC-Cchhh
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP-GAAAY  162 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~-~~~~y  162 (266)
                      ++++|++|||||+ ....++...+.+.++..+++|+.+++.+++.++|+|++.+ .++||++||..+..+  .+ ....|
T Consensus        79 ~~~id~vi~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~--~~~~~~~Y  154 (248)
T PRK08251         79 LGGLDRVIVNAGI-GKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAVRG--LPGVKAAY  154 (248)
T ss_pred             cCCCCEEEECCCc-CCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccccccC--CCCCcccH
Confidence            9999999999998 4445666778889999999999999999999999998766 689999999887665  34 36789


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          163 GACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      +++|++++.+++.++.++...||+++.|+||+++|++......             .....+++ |.++.++..++..
T Consensus       155 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-------------~~~~~~~~-~~a~~i~~~~~~~  218 (248)
T PRK08251        155 AASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS-------------TPFMVDTE-TGVKALVKAIEKE  218 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc-------------CCccCCHH-HHHHHHHHHHhcC
Confidence            9999999999999999999889999999999999987643210             11223454 9999998888653

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-31  Score=221.85  Aligned_cols=221  Identities=18%  Similarity=0.226  Sum_probs=176.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH-HHHHh-
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK-ACQIL-   84 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~-~~~~~-   84 (266)
                      ++|||||++|||++++++|+++|++|+++++.... +.   .. .  .+.++.++.+|+++.+  ++++++++ +.+.+ 
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~-~~---~~-~--~~~~~~~~~~D~~~~~--~~~~~~~~~~~~~~~   73 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP-SL---AA-A--AGERLAEVELDLSDAA--AAAAWLAGDLLAAFV   73 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch-hh---hh-c--cCCeEEEEEeccCCHH--HHHHHHHHHHHHHhc
Confidence            79999999999999999999999999998843221 11   11 1  1357889999999998  99998877 55555 


Q ss_pred             --CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhh
Q 024517           85 --GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY  162 (266)
Q Consensus        85 --g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y  162 (266)
                        +++|++|||+|...+..++.+.+.++++..+++|+.+++.+++.+.+.|.+.+ .++||++||..+..+  .+++..|
T Consensus        74 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~--~~~~~~Y  150 (243)
T PRK07023         74 DGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-ERRILHISSGAARNA--YAGWSVY  150 (243)
T ss_pred             cCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-CCEEEEEeChhhcCC--CCCchHH
Confidence              37999999999855556677788999999999999999999999999998765 689999999987766  5788999


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc----HHHHHHHhhccCCCCCCCChhhHHH-HHHHHc
Q 024517          163 GACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ----ERAVKLVREAAPLHRWLDVKNDLAS-TVIYLI  237 (266)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~-~~~~l~  237 (266)
                      +++|++++.+++.++.+ ...||+++.|+||+++|++.......    ......+....|.++..+|+ |+|+ .+.+|+
T Consensus       151 ~~sK~a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~~l~  228 (243)
T PRK07023        151 CATKAALDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPE-DAARRLIAYLL  228 (243)
T ss_pred             HHHHHHHHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHH-HHHHHHHHHHh
Confidence            99999999999999999 77899999999999999975432110    11122344556777778887 9999 566777


Q ss_pred             cCCC
Q 024517          238 SDGS  241 (266)
Q Consensus       238 s~~~  241 (266)
                      ++..
T Consensus       229 ~~~~  232 (243)
T PRK07023        229 SDDF  232 (243)
T ss_pred             cccc
Confidence            6643

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-31  Score=222.00  Aligned_cols=222  Identities=22%  Similarity=0.368  Sum_probs=182.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ++++|||||+++||+++++.|+++|++|++++ +.++.++..+.+...   +.++.++.+|+++.+  ++.++++++.+.
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~--~~~~~~~~~~~~   75 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH---GGEALVVPTDVSDAE--ACERLIEAAVAR   75 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEccCCCHH--HHHHHHHHHHHH
Confidence            47899999999999999999999999999999 555555555555443   357889999999999  999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCC-CHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhh
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQV-GEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY  162 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y  162 (266)
                      ++++|++|||+|.. ...++.+. +.+++++.+++|+.+++.+++.+.|+|.+.  .+++|++||..+..+  .++...|
T Consensus        76 ~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~~iv~~sS~~~~~~--~~~~~~Y  150 (263)
T PRK06181         76 FGGIDILVNNAGIT-MWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS--RGQIVVVSSLAGLTG--VPTRSGY  150 (263)
T ss_pred             cCCCCEEEECCCcc-cccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCEEEEEecccccCC--CCCccHH
Confidence            99999999999874 44556666 889999999999999999999999998754  389999999887665  5788999


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccC--CCCCCCChhhHHHHHHHHccCC
Q 024517          163 GACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAP--LHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      +++|++++.+++.++.++...++++++|.||++.|++.......... .  ....+  ..++.+|+ |+++.+.++++..
T Consensus       151 ~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~-dva~~i~~~~~~~  226 (263)
T PRK06181        151 AASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGK-P--LGKSPMQESKIMSAE-ECAEAILPAIARR  226 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhcccccc-c--cccccccccCCCCHH-HHHHHHHHHhhCC
Confidence            99999999999999999999999999999999999987543221110 0  01112  12556676 9999999999753

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.1e-31  Score=226.37  Aligned_cols=243  Identities=20%  Similarity=0.211  Sum_probs=191.7

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++.+++++|||+++|||+++|++|+.+|++|++.. +.++.++..+++....+ ..++.++.||+++..  +|+++.++.
T Consensus        32 ~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~-~~~i~~~~lDLssl~--SV~~fa~~~  108 (314)
T KOG1208|consen   32 DLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKA-NQKIRVIQLDLSSLK--SVRKFAEEF  108 (314)
T ss_pred             cCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCC-CCceEEEECCCCCHH--HHHHHHHHH
Confidence            46789999999999999999999999999999999 66788999999987443 368899999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC------
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG------  154 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~------  154 (266)
                      .+.++++|++|||||+..+.   ...+.|.+|..+.+|+.|++.+++.++|.|+++. +++||++||.......      
T Consensus       109 ~~~~~~ldvLInNAGV~~~~---~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~~~~~~~~~~l~  184 (314)
T KOG1208|consen  109 KKKEGPLDVLINNAGVMAPP---FSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSILGGGKIDLKDLS  184 (314)
T ss_pred             HhcCCCccEEEeCcccccCC---cccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCccccCccchhhcc
Confidence            99999999999999985332   2677789999999999999999999999999877 5999999998751100      


Q ss_pred             -----CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC-CcccccccHHHHHHHhhccCCCCCCCChhh
Q 024517          155 -----LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD-EYPIAVGQERAVKLVREAAPLHRWLDVKND  228 (266)
Q Consensus       155 -----~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  228 (266)
                           .+....+|+.||-++..+++.|++.+.. ||.+++++||.+.|+ +.+ .   ......+........+-+++ +
T Consensus       185 ~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r-~---~~~~~~l~~~l~~~~~ks~~-~  258 (314)
T KOG1208|consen  185 GEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR-V---NLLLRLLAKKLSWPLTKSPE-Q  258 (314)
T ss_pred             chhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceec-c---hHHHHHHHHHHHHHhccCHH-H
Confidence                 0233446999999999999999999988 999999999999999 544 1   11222222222111122454 8


Q ss_pred             HHHHHHHHcc-CCCCcccccEEEEcCCcccc
Q 024517          229 LASTVIYLIS-DGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       229 va~~~~~l~s-~~~~~~~G~~i~~dgG~~~~  258 (266)
                      -|++.++++- ++-...+|..+ -|++..-.
T Consensus       259 ga~t~~~~a~~p~~~~~sg~y~-~d~~~~~~  288 (314)
T KOG1208|consen  259 GAATTCYAALSPELEGVSGKYF-EDCAIAEP  288 (314)
T ss_pred             HhhheehhccCccccCcccccc-cccccccc
Confidence            8999998864 44567777663 44444433

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-31  Score=216.15  Aligned_cols=226  Identities=19%  Similarity=0.298  Sum_probs=187.4

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |.+.+++++||||+++||++++++|+++|++|++++ ++++.++..+++...    .++.++.+|+++.+  ++.+++++
T Consensus         2 ~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~D~~~~~--~~~~~~~~   75 (237)
T PRK07326          2 MSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK----GNVLGLAADVRDEA--DVQRAVDA   75 (237)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc----CcEEEEEccCCCHH--HHHHHHHH
Confidence            457789999999999999999999999999999998 555555665655432    46889999999988  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++||++|.. ...++.+.+.+++++.+++|+.+++.+++++++.|.+ + .+++|++||..+..+  .+..
T Consensus        76 ~~~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~-~~~iv~~ss~~~~~~--~~~~  150 (237)
T PRK07326         76 IVAAFGGLDVLIANAGVG-HFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR-G-GGYIINISSLAGTNF--FAGG  150 (237)
T ss_pred             HHHHcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH-C-CeEEEEECChhhccC--CCCC
Confidence            999999999999999873 4466778899999999999999999999999999843 3 589999999887655  5678


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.+++.++.++...|++++.|.||++.|++........           .....+++ |+++.+.++++.
T Consensus       151 ~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~-----------~~~~~~~~-d~a~~~~~~l~~  218 (237)
T PRK07326        151 AAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEK-----------DAWKIQPE-DIAQLVLDLLKM  218 (237)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccchh-----------hhccCCHH-HHHHHHHHHHhC
Confidence            899999999999999999999988999999999999998764422110           00123455 999999999988


Q ss_pred             CCCcccccEE
Q 024517          240 GSRYMTGTTI  249 (266)
Q Consensus       240 ~~~~~~G~~i  249 (266)
                      ..+.+.++..
T Consensus       219 ~~~~~~~~~~  228 (237)
T PRK07326        219 PPRTLPSKIE  228 (237)
T ss_pred             CccccccceE
Confidence            7666666544

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-31  Score=222.38  Aligned_cols=181  Identities=20%  Similarity=0.260  Sum_probs=159.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      |++|||||++|||++++++|+++|++|++++ +.++.++    +..     ..+.++.+|+++.+  +++++++++.+.+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~----~~~-----~~~~~~~~Dl~~~~--~~~~~~~~~~~~~   70 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEA----LAA-----AGFTAVQLDVNDGA--ALARLAEELEAEH   70 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHH-----CCCeEEEeeCCCHH--HHHHHHHHHHHhc
Confidence            6899999999999999999999999999998 4333322    221     24678899999988  9999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHH
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA  164 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~  164 (266)
                      +++|++|||||. ....++.+.+.++++..+++|+.+++.+++.++|.|.+.  .++||++||..+..+  .+....|++
T Consensus        71 ~~id~vi~~ag~-~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~--~~~~~~Y~~  145 (274)
T PRK05693         71 GGLDVLINNAGY-GAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS--RGLVVNIGSVSGVLV--TPFAGAYCA  145 (274)
T ss_pred             CCCCEEEECCCC-CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCEEEEECCccccCC--CCCccHHHH
Confidence            999999999998 455677788999999999999999999999999999753  489999999988766  577889999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccc
Q 024517          165 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI  202 (266)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~  202 (266)
                      +|++++.|+++++.|+.+.||+|+.|+||+|+|++...
T Consensus       146 sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~  183 (274)
T PRK05693        146 SKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASN  183 (274)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccc
Confidence            99999999999999999999999999999999998654

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.3e-31  Score=220.17  Aligned_cols=236  Identities=17%  Similarity=0.238  Sum_probs=184.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      .|++|||||+++||++++++|+++|++|++++ +.+..++..+..      +.++.++.+|+++.+  +++++++++.+.
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~--~~~~~~~~~~~~   73 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY------GDRLWVLQLDVTDSA--AVRAVVDRAFAA   73 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCceEEEEccCCCHH--HHHHHHHHHHHH
Confidence            47899999999999999999999999999988 443333333221      247889999999999  999999999988


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhH
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG  163 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~  163 (266)
                      ++++|++|||||.. ...+..+.+.++++..+++|+.+++.+++.++|+|++++ .++||++||..+..+  .++...|+
T Consensus        74 ~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~--~~~~~~Y~  149 (276)
T PRK06482         74 LGRIDVVVSNAGYG-LFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQIA--YPGFSLYH  149 (276)
T ss_pred             cCCCCEEEECCCCC-CCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccccC--CCCCchhH
Confidence            89999999999984 445666778899999999999999999999999998765 689999999887655  57889999


Q ss_pred             HhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-------cH----HHHHHHhhccCCCCCCCChhhHHHH
Q 024517          164 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-------QE----RAVKLVREAAPLHRWLDVKNDLAST  232 (266)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-------~~----~~~~~~~~~~~~~~~~~~~~dva~~  232 (266)
                      ++|++++.|+++++.++.+.||+++.|.||.+.|++......       ..    ...... ...+....++++ |++++
T Consensus       150 ~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~-~~~~a  227 (276)
T PRK06482        150 ATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRAL-ADGSFAIPGDPQ-KMVQA  227 (276)
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHH-hhccCCCCCCHH-HHHHH
Confidence            999999999999999999899999999999998887533211       01    111111 111222235666 99999


Q ss_pred             HHHHccCCCCcccccEEEEcCCccc
Q 024517          233 VIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       233 ~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +...+...   ..+..+.+.+|...
T Consensus       228 ~~~~~~~~---~~~~~~~~g~~~~~  249 (276)
T PRK06482        228 MIASADQT---PAPRRLTLGSDAYA  249 (276)
T ss_pred             HHHHHcCC---CCCeEEecChHHHH
Confidence            99988543   23455666655433

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-31  Score=216.84  Aligned_cols=211  Identities=18%  Similarity=0.218  Sum_probs=176.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      |+++||||++|||++++++|+++|++|++++ +.++.++..+.+....  +.++.++.+|+++.+  +++++++++.+  
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~--~~~~~~~~~~~--   75 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARG--AVAVSTHELDILDTA--SHAAFLDSLPA--   75 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhc--CCeEEEEecCCCChH--HHHHHHHHHhh--
Confidence            6899999999999999999999999999999 5555555555554331  357899999999998  99999888754  


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHH
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA  164 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~  164 (266)
                       ++|++|||+|.. ...++.+.+.+++.+.+++|+.+++.+++.+.|+|.+.+ .++++++||..+..+  .++...|++
T Consensus        76 -~~d~vv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~--~~~~~~Y~~  150 (243)
T PRK07102         76 -LPDIVLIAVGTL-GDQAACEADPALALREFRTNFEGPIALLTLLANRFEARG-SGTIVGISSVAGDRG--RASNYVYGS  150 (243)
T ss_pred             -cCCEEEECCcCC-CCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEEEEEecccccCC--CCCCcccHH
Confidence             479999999974 335666788999999999999999999999999998766 689999999987666  577889999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          165 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      +|++++.++++++.++.+.||++++|+||.++|++....            ..|.....+++ ++++.+..+++.+
T Consensus       151 sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~------------~~~~~~~~~~~-~~a~~i~~~~~~~  213 (243)
T PRK07102        151 AKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL------------KLPGPLTAQPE-EVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhcc------------CCCccccCCHH-HHHHHHHHHHhCC
Confidence            999999999999999999999999999999999865331            11222345555 9999999999764

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=6.9e-31  Score=214.72  Aligned_cols=189  Identities=18%  Similarity=0.258  Sum_probs=172.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|.|+|||..+|.|+.+|++|.++|++|+... .++..+++..+..     ..+...+..|+++++  +|+++.+.+
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~-----s~rl~t~~LDVT~~e--si~~a~~~V   98 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK-----SPRLRTLQLDVTKPE--SVKEAAQWV   98 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc-----CCcceeEeeccCCHH--HHHHHHHHH
Confidence            35789999999999999999999999999999988 7776676666653     257888899999999  999999999


Q ss_pred             HHHhC--CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           81 CQILG--NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        81 ~~~~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      .++.+  ++-.+|||||++...++.+..+.+++++.+++|+.|++.++|.++|.+++.+  |+||++||+.|..+  .|.
T Consensus        99 ~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar--GRvVnvsS~~GR~~--~p~  174 (322)
T KOG1610|consen   99 KKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR--GRVVNVSSVLGRVA--LPA  174 (322)
T ss_pred             HHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc--CeEEEecccccCcc--Ccc
Confidence            98764  4899999999878888888999999999999999999999999999998875  99999999999777  689


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYP  201 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~  201 (266)
                      ..+|++||+|++.|+.++++|+.+.||+|..|.||.+.|+...
T Consensus       175 ~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  175 LGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             cccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            9999999999999999999999999999999999999999875

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.98  E-value=5.1e-31  Score=246.70  Aligned_cols=216  Identities=19%  Similarity=0.206  Sum_probs=180.6

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++|+++||||++|||++++++|+++|++|++++ +.+.++++.+++...   +.++.++.+|+++.+  +++++++++.
T Consensus       369 ~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~--~~~~~~~~~~  443 (657)
T PRK07201        369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK---GGTAHAYTCDLTDSA--AVDHTVKDIL  443 (657)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEecCCCHH--HHHHHHHHHH
Confidence            5789999999999999999999999999999999 666667776666543   357899999999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCC--CHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.++++|++|||||.. ....+.+.  ..++++.++++|+.+++.+++.++|.|++++ .++||++||..+..+  .+..
T Consensus       444 ~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~  519 (657)
T PRK07201        444 AEHGHVDYLVNNAGRS-IRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVSSIGVQTN--APRF  519 (657)
T ss_pred             HhcCCCCEEEECCCCC-CCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcCC--CCCc
Confidence            9999999999999973 22333222  2578999999999999999999999998776 689999999987765  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|+++++.|+.+.||++|+|+||+|+|++......           .+.....+|+ ++|+.++..+..
T Consensus       520 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~-----------~~~~~~~~~~-~~a~~i~~~~~~  587 (657)
T PRK07201        520 SAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR-----------YNNVPTISPE-EAADMVVRAIVE  587 (657)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc-----------ccCCCCCCHH-HHHHHHHHHHHh
Confidence            8999999999999999999999999999999999999998753210           0111234555 999999887654

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.98  E-value=1.7e-31  Score=205.80  Aligned_cols=185  Identities=20%  Similarity=0.217  Sum_probs=165.6

Q ss_pred             CCcEEEEecCC-CchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDG-DEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~-~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +.|.|||||++ ||||.+++++|.+.|+.|+.+. +.++..++..+        .....+++|+++++  ++..+..+++
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~--------~gl~~~kLDV~~~~--~V~~v~~evr   75 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ--------FGLKPYKLDVSKPE--EVVTVSGEVR   75 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh--------hCCeeEEeccCChH--HHHHHHHHHh
Confidence            57889999887 8999999999999999999999 66666665544        36889999999999  9999999999


Q ss_pred             H-HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           82 Q-ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        82 ~-~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      + .+|++|+++||||.. =..|..+.+.++.++.+++|++|.+.++|++...+.+.  .|.||++.|..+..+  +|...
T Consensus        76 ~~~~Gkld~L~NNAG~~-C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika--KGtIVnvgSl~~~vp--fpf~~  150 (289)
T KOG1209|consen   76 ANPDGKLDLLYNNAGQS-CTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA--KGTIVNVGSLAGVVP--FPFGS  150 (289)
T ss_pred             hCCCCceEEEEcCCCCC-cccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc--cceEEEecceeEEec--cchhh
Confidence            8 789999999999983 44677789999999999999999999999999766554  499999999999888  79999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccc
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA  203 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~  203 (266)
                      .|.++|+|++.+++.|+.|+++.||+|..+.||-|.|+...+.
T Consensus       151 iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k~  193 (289)
T KOG1209|consen  151 IYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADKR  193 (289)
T ss_pred             hhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccCC
Confidence            9999999999999999999999999999999999999987663

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.97  E-value=4.7e-31  Score=217.77  Aligned_cols=207  Identities=23%  Similarity=0.261  Sum_probs=164.6

Q ss_pred             HHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCCCCEEEEcCCCCCCC
Q 024517           21 IAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM  100 (266)
Q Consensus        21 ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~  100 (266)
                      +|++|+++|++|+++++.+...+             ...++.+|+++.+  +++++++++.   +++|++|||||.. ..
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-------------~~~~~~~Dl~~~~--~v~~~~~~~~---~~iD~li~nAG~~-~~   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-------------LDGFIQADLGDPA--SIDAAVAALP---GRIDALFNIAGVP-GT   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-------------hhHhhcccCCCHH--HHHHHHHHhc---CCCeEEEECCCCC-CC
Confidence            47899999999999984322111             1235789999988  9999988763   6899999999873 21


Q ss_pred             CCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc-------------------------CC
Q 024517          101 QDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER-------------------------GL  155 (266)
Q Consensus       101 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~-------------------------~~  155 (266)
                              ++++.++++|+.+++.+++.++|+|.+   +|+||++||.++...                         .+
T Consensus        62 --------~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (241)
T PRK12428         62 --------APVELVARVNFLGLRHLTEALLPRMAP---GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHP  130 (241)
T ss_pred             --------CCHHHhhhhchHHHHHHHHHHHHhccC---CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccC
Confidence                    347899999999999999999999864   489999999987531                         12


Q ss_pred             CCCchhhHHhHHHHHHHHHHHH-HHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHH
Q 024517          156 YPGAAAYGACAASIHQLVRTAA-MEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI  234 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la-~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (266)
                      .++...|+++|++++.|++.++ .|++++|||||+|+||++.|++..................|++++.+|+ |+|+.++
T Consensus       131 ~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-~va~~~~  209 (241)
T PRK12428        131 VALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATAD-EQAAVLV  209 (241)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHH-HHHHHHH
Confidence            4677899999999999999999 9999999999999999999998765321110011112345778888887 9999999


Q ss_pred             HHccCCCCcccccEEEEcCCcccc
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      +|+++...+++|+.+.+|||....
T Consensus       210 ~l~s~~~~~~~G~~i~vdgg~~~~  233 (241)
T PRK12428        210 FLCSDAARWINGVNLPVDGGLAAT  233 (241)
T ss_pred             HHcChhhcCccCcEEEecCchHHH
Confidence            999988889999999999997643

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.97  E-value=4.3e-31  Score=215.82  Aligned_cols=188  Identities=23%  Similarity=0.270  Sum_probs=167.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      |++++||||+.|||++.|++|+++|.+|++++ ++++++.++++|.+.++  .+++++.+|+++.+  ++   .+.+.+.
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~--vev~~i~~Dft~~~--~~---ye~i~~~  121 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK--VEVRIIAIDFTKGD--EV---YEKLLEK  121 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC--cEEEEEEEecCCCc--hh---HHHHHHH
Confidence            58999999999999999999999999999999 88999999999998875  68999999999988  52   3333333


Q ss_pred             h--CCCCEEEEcCCCCC-CCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           84 L--GNLDAFVHCYTYEG-KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        84 ~--g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .  ..|.++|||+|... ....+.+.+.+.+++.+++|+.+...+++.++|.|.+++ .|.|++|+|.++..+  .|.+.
T Consensus       122 l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~-~G~IvnigS~ag~~p--~p~~s  198 (312)
T KOG1014|consen  122 LAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERK-KGIIVNIGSFAGLIP--TPLLS  198 (312)
T ss_pred             hcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCC-CceEEEecccccccc--ChhHH
Confidence            2  36889999999854 234567777889999999999999999999999999977 799999999999988  79999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccc
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI  202 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~  202 (266)
                      .|+++|+.+..|+++|+.|+..+||.|-+|.|.+|-|+|...
T Consensus       199 ~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~  240 (312)
T KOG1014|consen  199 VYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKY  240 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecccccc
Confidence            999999999999999999999999999999999999998754

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.8e-30  Score=213.00  Aligned_cols=204  Identities=17%  Similarity=0.245  Sum_probs=165.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      ++++||||++|||++++++|+++|++|++++ +.++++++.+.       ..++.++.+|+++.+  +++++++++.   
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~D~~~~~--~~~~~~~~~~---   69 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ-------SANIFTLAFDVTDHP--GTKAALSQLP---   69 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh-------cCCCeEEEeeCCCHH--HHHHHHHhcc---
Confidence            6899999999999999999999999999998 44433333221       246789999999988  9999988764   


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHH
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA  164 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~  164 (266)
                      ..+|.+|||+|.. ...+..+.+.++|++++++|+.+++++++.+.|.|.+   +++++++||..+..+  .+....|++
T Consensus        70 ~~~d~~i~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~isS~~~~~~--~~~~~~Y~a  143 (240)
T PRK06101         70 FIPELWIFNAGDC-EYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC---GHRVVIVGSIASELA--LPRAEAYGA  143 (240)
T ss_pred             cCCCEEEEcCccc-ccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCeEEEEechhhccC--CCCCchhhH
Confidence            2479999999863 2234445788999999999999999999999999964   478999999988776  578889999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          165 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      +|++++.|++.++.|+..+||+++.|.||++.|++.....            .......+++ ++++.+...+...
T Consensus       144 sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~------------~~~~~~~~~~-~~a~~i~~~i~~~  206 (240)
T PRK06101        144 SKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT------------FAMPMIITVE-QASQEIRAQLARG  206 (240)
T ss_pred             HHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC------------CCCCcccCHH-HHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999864321            0111223454 9999998887653

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=5.7e-30  Score=208.91  Aligned_cols=223  Identities=13%  Similarity=0.184  Sum_probs=189.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      +.++||||++|||+++|.++..+|++|.++. +.+++.+++.+++-.... .++.+..+|+.|.+  ++..++++++..+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~-~~v~~~S~d~~~Y~--~v~~~~~~l~~~~  110 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQV-EDVSYKSVDVIDYD--SVSKVIEELRDLE  110 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhcc-ceeeEeccccccHH--HHHHHHhhhhhcc
Confidence            5899999999999999999999999999998 778888888888755332 34779999999999  9999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHH
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA  164 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~  164 (266)
                      +.+|.+++|||. ...+-+.+.+.++++.++++|+.++++.+++.++.|++....|+|+.+||.++..+  ..++.+|++
T Consensus       111 ~~~d~l~~cAG~-~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~--i~GysaYs~  187 (331)
T KOG1210|consen  111 GPIDNLFCCAGV-AVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLG--IYGYSAYSP  187 (331)
T ss_pred             CCcceEEEecCc-ccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcC--ccccccccc
Confidence            999999999998 57788899999999999999999999999999999998765579999999999988  799999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          165 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      +|+|+.+|+..+++|+.+.||+|....|+.+.||.+...   +..+......+....-..+.+|+|+.++.-+
T Consensus       188 sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~E---n~tkP~~t~ii~g~ss~~~~e~~a~~~~~~~  257 (331)
T KOG1210|consen  188 SKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERE---NKTKPEETKIIEGGSSVIKCEEMAKAIVKGM  257 (331)
T ss_pred             HHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccc---cccCchheeeecCCCCCcCHHHHHHHHHhHH
Confidence            999999999999999999999999999999999987542   2222222222222222233358888887655

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=1.2e-29  Score=197.58  Aligned_cols=162  Identities=24%  Similarity=0.442  Sum_probs=144.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC-eEEEEecc---cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNE---RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      |++|||||++|||++++++|+++|. .|+++++.   +..+++.+++...   +.++.++++|+++++  +++++++++.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~---~~~~~~~~~D~~~~~--~~~~~~~~~~   75 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP---GAKITFIECDLSDPE--SIRALIEEVI   75 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT---TSEEEEEESETTSHH--HHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc---ccccccccccccccc--cccccccccc
Confidence            7899999999999999999999977 66666654   5666676666633   478999999999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.++++|++|||+|... ..++.+.+.++|++++++|+.+++.+.+.+.|    ++ +|+||++||..+..+  .+.+..
T Consensus        76 ~~~~~ld~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~-~g~iv~~sS~~~~~~--~~~~~~  147 (167)
T PF00106_consen   76 KRFGPLDILINNAGIFS-DGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QG-GGKIVNISSIAGVRG--SPGMSA  147 (167)
T ss_dssp             HHHSSESEEEEECSCTT-SBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HT-TEEEEEEEEGGGTSS--STTBHH
T ss_pred             ccccccccccccccccc-ccccccccchhhhhccccccceeeeeeehhee----cc-ccceEEecchhhccC--CCCChh
Confidence            99999999999999954 67888889999999999999999999999999    22 699999999999887  699999


Q ss_pred             hHHhHHHHHHHHHHHHHHh
Q 024517          162 YGACAASIHQLVRTAAMEI  180 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~  180 (266)
                      |+++|+|+++|++++++|+
T Consensus       148 Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  148 YSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08264 short chain dehydrogenase; Validated

Probab=99.97  E-value=8e-29  Score=203.90  Aligned_cols=205  Identities=20%  Similarity=0.267  Sum_probs=169.1

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEec-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |++++++++||||+++||+++|++|+++|+ +|+++++ .++.++       .   +.++.++.+|+++.+  +++++++
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~---~~~~~~~~~D~~~~~--~~~~~~~   69 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------L---GPRVVPLQLDVTDPA--SVAAAAE   69 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------c---CCceEEEEecCCCHH--HHHHHHH
Confidence            678899999999999999999999999999 9998884 333222       1   357889999999988  8877776


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      .    ++++|++||++|......++.+.+.++++..+++|+.+++.+.+++.|.+++.+ .++++++||..+..+  .++
T Consensus        70 ~----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~--~~~  142 (238)
T PRK08264         70 A----ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSWVN--FPN  142 (238)
T ss_pred             h----cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhccC--CCC
Confidence            4    478999999999844556677889999999999999999999999999998765 689999999887665  578


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ...|+++|++++.+++.++.++.++|++++.+.||.++|++......               ...+++ ++++.++..+.
T Consensus       143 ~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~~---------------~~~~~~-~~a~~~~~~~~  206 (238)
T PRK08264        143 LGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLDA---------------PKASPA-DVARQILDALE  206 (238)
T ss_pred             chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCCc---------------CCCCHH-HHHHHHHHHHh
Confidence            88999999999999999999999899999999999999987543210               123333 77777776665


Q ss_pred             CC
Q 024517          239 DG  240 (266)
Q Consensus       239 ~~  240 (266)
                      ..
T Consensus       207 ~~  208 (238)
T PRK08264        207 AG  208 (238)
T ss_pred             CC
Confidence            43

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.9e-29  Score=203.15  Aligned_cols=182  Identities=17%  Similarity=0.249  Sum_probs=151.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      |+++||||+++||++++++|+++|++|++++ +.+..++. ++.       .++.++.+|++|.+  +++++++++..  
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~-------~~~~~~~~D~~d~~--~~~~~~~~~~~--   69 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-QAL-------PGVHIEKLDMNDPA--SLDQLLQRLQG--   69 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH-Hhc-------cccceEEcCCCCHH--HHHHHHHHhhc--
Confidence            6899999999999999999999999999999 54444332 221       35678889999998  99999988753  


Q ss_pred             CCCCEEEEcCCCCCC-CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-CCCCchhh
Q 024517           85 GNLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-LYPGAAAY  162 (266)
Q Consensus        85 g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-~~~~~~~y  162 (266)
                      +++|++|||+|.... ..++.+.+.++++..+++|+.+++.+++.+.|+|.+.  .+.++++||..+..+. +......|
T Consensus        70 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~iv~~ss~~g~~~~~~~~~~~~Y  147 (225)
T PRK08177         70 QRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG--QGVLAFMSSQLGSVELPDGGEMPLY  147 (225)
T ss_pred             CCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc--CCEEEEEccCccccccCCCCCccch
Confidence            579999999998533 2356678889999999999999999999999998753  3799999997765431 12356789


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcc
Q 024517          163 GACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYP  201 (266)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~  201 (266)
                      +++|++++.|++.++.+++++||++|+|+||+++|++..
T Consensus       148 ~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~  186 (225)
T PRK08177        148 KASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGG  186 (225)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCC
Confidence            999999999999999999999999999999999999854

>PRK08017 oxidoreductase; Provisional

Probab=99.97  E-value=1.4e-28  Score=204.56  Aligned_cols=222  Identities=17%  Similarity=0.198  Sum_probs=174.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      |+++||||+++||+++++.|+++|++|++++ +.++.+..    ..     ..+..+.+|+++.+  ++.++++.+....
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~----~~-----~~~~~~~~D~~~~~--~~~~~~~~i~~~~   71 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM----NS-----LGFTGILLDLDDPE--SVERAADEVIALT   71 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH----Hh-----CCCeEEEeecCCHH--HHHHHHHHHHHhc
Confidence            7899999999999999999999999999988 44433322    21     24678899999988  9999999887754


Q ss_pred             -CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhH
Q 024517           85 -GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG  163 (266)
Q Consensus        85 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~  163 (266)
                       +++|.++|++|. ....++.+.+.++++..+++|+.+++.+++.++|.|.+.+ .++++++||..+..+  .+....|+
T Consensus        72 ~~~~~~ii~~ag~-~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~--~~~~~~Y~  147 (256)
T PRK08017         72 DNRLYGLFNNAGF-GVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGLIS--TPGRGAYA  147 (256)
T ss_pred             CCCCeEEEECCCC-CCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCcccccC--CCCccHHH
Confidence             689999999997 3445677788999999999999999999999999998766 589999999887766  57889999


Q ss_pred             HhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCc
Q 024517          164 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY  243 (266)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  243 (266)
                      ++|++++.++++++.++...+++++.|.||.++|++......................+..++ |+++.+..+++.....
T Consensus       148 ~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~a~~~~~~~~~~~~~  226 (256)
T PRK08017        148 ASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPE-AVVPKLRHALESPKPK  226 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHH-HHHHHHHHHHhCCCCC
Confidence            999999999999999999999999999999999987654321110000000000001235666 9999999999765443

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.8e-28  Score=202.04  Aligned_cols=182  Identities=19%  Similarity=0.290  Sum_probs=155.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +|++|||||++|||++++++|+++|++|++++ +.+..++..+.....   +.++.++.+|+++.+  ++.++++     
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~-----   71 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR---GLALRVEKLDLTDAI--DRAQAAE-----   71 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcceEEEeeCCCHH--HHHHHhc-----
Confidence            57899999999999999999999999999988 444444444443322   346889999999988  7776653     


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhH
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG  163 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~  163 (266)
                       +++|++|||||.. ...++.+.+.++++..+++|+.+++.+++.+++.|.+.+ .++||++||..+..+  .++...|+
T Consensus        72 -~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~--~~~~~~Y~  146 (257)
T PRK09291         72 -WDVDVLLNNAGIG-EAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGLIT--GPFTGAYC  146 (257)
T ss_pred             -CCCCEEEECCCcC-CCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhccC--CCCcchhH
Confidence             4799999999984 556778889999999999999999999999999998776 589999999887665  46788999


Q ss_pred             HhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcc
Q 024517          164 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYP  201 (266)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~  201 (266)
                      ++|++++.+++.++.++.+.||+++.|+||++.|++..
T Consensus       147 ~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~  184 (257)
T PRK09291        147 ASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFND  184 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchh
Confidence            99999999999999999989999999999999998753

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=1.3e-29  Score=197.54  Aligned_cols=240  Identities=18%  Similarity=0.191  Sum_probs=185.8

Q ss_pred             CCC-CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MEN-QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l-~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |++ .+|++|+||++.|||..++..+..++..+.... +....+  .+.+.-.+  +........|++...  -..+.++
T Consensus         1 m~~~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~--gd~~v~~~g~~~e~~--~l~al~e   74 (253)
T KOG1204|consen    1 MDLNMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAY--GDDFVHVVGDITEEQ--LLGALRE   74 (253)
T ss_pred             CCcccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEe--cCCcceechHHHHHH--HHHHHHh
Confidence            555 567899999999999999999988877665554 222222  11111111  223344445666555  5677777


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCC--CCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY  156 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  156 (266)
                      ..+..++..|++|||||..++.....  ..+.++|++.++.|+++.+.+.+.++|.+++++..+.+||+||.++..+  +
T Consensus        75 ~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p--~  152 (253)
T KOG1204|consen   75 APRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRP--F  152 (253)
T ss_pred             hhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhcc--c
Confidence            77888899999999999877665555  6788999999999999999999999999998754699999999999888  8


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----cHHHHHHHhhccCCCCCCCChhhHHHH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKLVREAAPLHRWLDVKNDLAST  232 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~  232 (266)
                      ..+..||.+|+|.++|.+.++.|-. .++|+.++.||.++|+|......    .+.....+++....++..+|. ..|+.
T Consensus       153 ~~wa~yc~~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~-~~a~~  230 (253)
T KOG1204|consen  153 SSWAAYCSSKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQ-VTAKV  230 (253)
T ss_pred             cHHHHhhhhHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChh-hHHHH
Confidence            9999999999999999999999855 79999999999999999865432    234445555555667778887 88999


Q ss_pred             HHHHccCCCCcccccEEEE
Q 024517          233 VIYLISDGSRYMTGTTIYV  251 (266)
Q Consensus       233 ~~~l~s~~~~~~~G~~i~~  251 (266)
                      +..|+.... +.+||.+..
T Consensus       231 l~~L~e~~~-f~sG~~vdy  248 (253)
T KOG1204|consen  231 LAKLLEKGD-FVSGQHVDY  248 (253)
T ss_pred             HHHHHHhcC-ccccccccc
Confidence            999986543 899987654

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.96  E-value=7e-28  Score=198.95  Aligned_cols=197  Identities=16%  Similarity=0.204  Sum_probs=145.8

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++++|+++||||++|||++++++|+++|++|+++++... +.. +... .    .....+.+|+++.+  ++++      
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~-~~~-~~~~-~----~~~~~~~~D~~~~~--~~~~------   75 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKI-NNS-ESND-E----SPNEWIKWECGKEE--SLDK------   75 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCch-hhh-hhhc-c----CCCeEEEeeCCCHH--HHHH------
Confidence            367999999999999999999999999999999884321 111 1111 1    12257889999877  6553      


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC--CCCeEEEEecccccccCCCCCc
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK--AGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~g~iv~iss~~~~~~~~~~~~  159 (266)
                       .++++|++|||||.. .   ..+.+.++|+.++++|+.+++.+++.++|.|.+++  .++.+++.+|.++..+   +..
T Consensus        76 -~~~~iDilVnnAG~~-~---~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~---~~~  147 (245)
T PRK12367         76 -QLASLDVLILNHGIN-P---GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP---ALS  147 (245)
T ss_pred             -hcCCCCEEEECCccC-C---cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC---CCC
Confidence             357899999999973 2   23467899999999999999999999999997631  1334555556554333   456


Q ss_pred             hhhHHhHHHHHHHH---HHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          160 AAYGACAASIHQLV---RTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       160 ~~y~~sK~a~~~~~---~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      ..|++||+|+..+.   +.++.|+...+++++.++||+++|++..                  ....+|+ |+|+.+++.
T Consensus       148 ~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~------------------~~~~~~~-~vA~~i~~~  208 (245)
T PRK12367        148 PSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP------------------IGIMSAD-FVAKQILDQ  208 (245)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc------------------cCCCCHH-HHHHHHHHH
Confidence            78999999986544   4455566778999999999999988621                  0124555 999999999


Q ss_pred             ccCC
Q 024517          237 ISDG  240 (266)
Q Consensus       237 ~s~~  240 (266)
                      ++..
T Consensus       209 ~~~~  212 (245)
T PRK12367        209 ANLG  212 (245)
T ss_pred             HhcC
Confidence            8654

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.4e-27  Score=194.54  Aligned_cols=214  Identities=19%  Similarity=0.235  Sum_probs=168.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      |+++||||+++||++++++|+++|++|++++ +.+..+    ++..     ..+.++.+|+++.+  +++++++++..  
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~----~~~~-----~~~~~~~~D~~~~~--~v~~~~~~~~~--   68 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALA----ALQA-----LGAEALALDVADPA--SVAGLAWKLDG--   68 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHH----HHHh-----ccceEEEecCCCHH--HHHHHHHHhcC--
Confidence            5899999999999999999999999999998 433332    2322     23568899999998  99888776532  


Q ss_pred             CCCCEEEEcCCCCCC-CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC-CCCchhh
Q 024517           85 GNLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL-YPGAAAY  162 (266)
Q Consensus        85 g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~-~~~~~~y  162 (266)
                      +++|++||++|.... ..++.+.+.++++..+++|+.+++.+++.+.|+|.+.  .+++++++|..+..+.. ......|
T Consensus        69 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~~~Y  146 (222)
T PRK06953         69 EALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA--GGVLAVLSSRMGSIGDATGTTGWLY  146 (222)
T ss_pred             CCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc--CCeEEEEcCcccccccccCCCcccc
Confidence            479999999997532 2445567899999999999999999999999998653  48999999987755421 1122369


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCC
Q 024517          163 GACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR  242 (266)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  242 (266)
                      +++|++++.+++.++.++.  ++++|+|+||+++|++....                 ....+ ++.+..+..++.....
T Consensus       147 ~~sK~a~~~~~~~~~~~~~--~i~v~~v~Pg~i~t~~~~~~-----------------~~~~~-~~~~~~~~~~~~~~~~  206 (222)
T PRK06953        147 RASKAALNDALRAASLQAR--HATCIALHPGWVRTDMGGAQ-----------------AALDP-AQSVAGMRRVIAQATR  206 (222)
T ss_pred             HHhHHHHHHHHHHHhhhcc--CcEEEEECCCeeecCCCCCC-----------------CCCCH-HHHHHHHHHHHHhcCc
Confidence            9999999999999998863  69999999999999986421                 11234 4888888888776667


Q ss_pred             cccccEEEEcCC
Q 024517          243 YMTGTTIYVDGA  254 (266)
Q Consensus       243 ~~~G~~i~~dgG  254 (266)
                      ..+|+.+..|++
T Consensus       207 ~~~~~~~~~~~~  218 (222)
T PRK06953        207 RDNGRFFQYDGV  218 (222)
T ss_pred             ccCceEEeeCCc
Confidence            889999988876

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.1e-26  Score=189.68  Aligned_cols=218  Identities=23%  Similarity=0.296  Sum_probs=171.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEecc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      .|++|||||+++||+++++.|+++ ++|++++|. +..++..+..       ..+.++.+|+++.+  +++++++.+   
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~D~~~~~--~~~~~~~~~---   69 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL-------PGATPFPVDLTDPE--AIAAAVEQL---   69 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh-------ccceEEecCCCCHH--HHHHHHHhc---
Confidence            579999999999999999999999 999999843 3333222221       35778999999988  888877653   


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhH
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG  163 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~  163 (266)
                       +++|++||++|.. ...++.+.+.++|..++++|+.+++.+.+.+++.|.+..  ++++++||..+..+  .++...|+
T Consensus        70 -~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~v~~ss~~~~~~--~~~~~~y~  143 (227)
T PRK08219         70 -GRLDVLVHNAGVA-DLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH--GHVVFINSGAGLRA--NPGWGSYA  143 (227)
T ss_pred             -CCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CeEEEEcchHhcCc--CCCCchHH
Confidence             5899999999973 445666788899999999999999999999999988754  79999999887665  57789999


Q ss_pred             HhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCc
Q 024517          164 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY  243 (266)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  243 (266)
                      ++|++++.+++.++.++... +++++|.||.+.+++......      ......+..++.+++ |+++.++++++...  
T Consensus       144 ~~K~a~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~------~~~~~~~~~~~~~~~-dva~~~~~~l~~~~--  213 (227)
T PRK08219        144 ASKFALRALADALREEEPGN-VRVTSVHPGRTDTDMQRGLVA------QEGGEYDPERYLRPE-TVAKAVRFAVDAPP--  213 (227)
T ss_pred             HHHHHHHHHHHHHHHHhcCC-ceEEEEecCCccchHhhhhhh------hhccccCCCCCCCHH-HHHHHHHHHHcCCC--
Confidence            99999999999999988766 999999999998876433211      001122334566776 99999999997543  


Q ss_pred             ccccEEEEc
Q 024517          244 MTGTTIYVD  252 (266)
Q Consensus       244 ~~G~~i~~d  252 (266)
                       .|+.+.++
T Consensus       214 -~~~~~~~~  221 (227)
T PRK08219        214 -DAHITEVV  221 (227)
T ss_pred             -CCccceEE
Confidence             45555554

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.94  E-value=6.9e-25  Score=191.56  Aligned_cols=197  Identities=15%  Similarity=0.193  Sum_probs=146.5

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|+++||||++|||++++++|+++|++|++++ +.+++++   .+...   ...+..+.+|++|.+  ++.+.   
T Consensus       174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~---~~~~~---~~~v~~v~~Dvsd~~--~v~~~---  242 (406)
T PRK07424        174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITL---EINGE---DLPVKTLHWQVGQEA--ALAEL---  242 (406)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---HHhhc---CCCeEEEEeeCCCHH--HHHHH---
Confidence            357899999999999999999999999999999998 4443322   22111   135678899999977  66543   


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCC---CCeEEEEecccccccCCC
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA---GGSIVFLTSIIGAERGLY  156 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---~g~iv~iss~~~~~~~~~  156 (266)
                          ++++|++|||||.. .   ..+.+.+++++++++|+.+++.+++.++|.|++++.   ++.++++|+ +. ..  .
T Consensus       243 ----l~~IDiLInnAGi~-~---~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~--~  310 (406)
T PRK07424        243 ----LEKVDILIINHGIN-V---HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VN--P  310 (406)
T ss_pred             ----hCCCCEEEECCCcC-C---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-cc--C
Confidence                36899999999973 2   235778999999999999999999999999977541   234555554 33 22  2


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      +..+.|++||+|+..|+. +.++.  .++.+..+.||+++|++.+                 . ...+|+ ++|+.+++.
T Consensus       311 ~~~~~Y~ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~-----------------~-~~~spe-~vA~~il~~  368 (406)
T PRK07424        311 AFSPLYELSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP-----------------I-GVMSAD-WVAKQILKL  368 (406)
T ss_pred             CCchHHHHHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc-----------------C-CCCCHH-HHHHHHHHH
Confidence            456789999999999985 44442  4677888899999887521                 1 124555 999999999


Q ss_pred             ccCCCC
Q 024517          237 ISDGSR  242 (266)
Q Consensus       237 ~s~~~~  242 (266)
                      ++....
T Consensus       369 i~~~~~  374 (406)
T PRK07424        369 AKRDFR  374 (406)
T ss_pred             HHCCCC
Confidence            976553

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.93  E-value=1.5e-24  Score=221.22  Aligned_cols=185  Identities=14%  Similarity=0.122  Sum_probs=154.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHc-CCeEEEEecccc------------------------------------------
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKR-GCRLVLVGNERR------------------------------------------   40 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~-g~~v~~~~~~~~------------------------------------------   40 (266)
                      +++++|||||++|||.++|++|+++ |++|++++|...                                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5889999999999999999999998 699999984310                                          


Q ss_pred             ---cHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHc
Q 024517           41 ---LSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKI  117 (266)
Q Consensus        41 ---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~  117 (266)
                         ..+..+.+......+.++.++.||++|.+  +++++++++.+. ++||+||||||+. ....+.+.+.++|++.+++
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~--av~~av~~v~~~-g~IDgVVhnAGv~-~~~~i~~~t~e~f~~v~~~ 2151 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSV--SVAATVQPLNKT-LQITGIIHGAGVL-ADKHIQDKTLEEFNAVYGT 2151 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHH--HHHHHHHHHHHh-CCCcEEEECCccC-CCCCcccCCHHHHHHHHHH
Confidence               00111111111112568899999999999  999999999877 6899999999984 5577889999999999999


Q ss_pred             cchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccC
Q 024517          118 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQ  197 (266)
Q Consensus       118 n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t  197 (266)
                      |+.|++++++++.+.+.     +.||++||+++..+  .++...|+++|++++.|++.++.++.  ++||++|+||+++|
T Consensus      2152 nv~G~~~Ll~al~~~~~-----~~IV~~SSvag~~G--~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdt 2222 (2582)
T TIGR02813      2152 KVDGLLSLLAALNAENI-----KLLALFSSAAGFYG--NTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDG 2222 (2582)
T ss_pred             HHHHHHHHHHHHHHhCC-----CeEEEEechhhcCC--CCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecC
Confidence            99999999999877543     58999999999877  58899999999999999999999874  49999999999999


Q ss_pred             CCcc
Q 024517          198 DEYP  201 (266)
Q Consensus       198 ~~~~  201 (266)
                      +|..
T Consensus      2223 gm~~ 2226 (2582)
T TIGR02813      2223 GMVN 2226 (2582)
T ss_pred             Cccc
Confidence            8864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.91  E-value=7.1e-23  Score=160.19  Aligned_cols=174  Identities=21%  Similarity=0.263  Sum_probs=142.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHH---HHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVA---EKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      |+++||||+++||++++++|+++|+ .|++++ +.+..+...   +.++..   +.++.++.+|+++.+  +++++++++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~~   75 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL---GAEVTVVACDVADRA--ALAAALAAI   75 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc---CCeEEEEECCCCCHH--HHHHHHHHH
Confidence            5799999999999999999999997 566666 433333222   333322   357889999999988  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      ...++++|.+||++|.. ...++...+.++++.++++|+.+++.+.+.+.+    .+ .++++++||..+..+  .+++.
T Consensus        76 ~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~ii~~ss~~~~~~--~~~~~  147 (180)
T smart00822       76 PARLGPLRGVIHAAGVL-DDGLLANLTPERFAAVLAPKVDGAWNLHELTRD----LP-LDFFVLFSSVAGVLG--NPGQA  147 (180)
T ss_pred             HHHcCCeeEEEEccccC-CccccccCCHHHHHHhhchHhHHHHHHHHHhcc----CC-cceEEEEccHHHhcC--CCCch
Confidence            88899999999999974 445677888999999999999999999998833    22 589999999988776  57889


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCccc
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL  196 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~  196 (266)
                      .|+++|+++..+++.++.    .++++..+.||++.
T Consensus       148 ~y~~sk~~~~~~~~~~~~----~~~~~~~~~~g~~~  179 (180)
T smart00822      148 NYAAANAFLDALAAHRRA----RGLPATSINWGAWA  179 (180)
T ss_pred             hhHHHHHHHHHHHHHHHh----cCCceEEEeecccc
Confidence            999999999999977644    57889999999874

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.89  E-value=1e-21  Score=175.83  Aligned_cols=224  Identities=14%  Similarity=0.134  Sum_probs=158.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhccc----C--CCCCeEEEEEecCCCchHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSL----K--GGQPVEVVGLDMEEDREGAFDEA   76 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~----~--~~~~~~~~~~D~~~~~~~~v~~~   76 (266)
                      +||++|||||+|+||++++++|+++|++|++++ +.++++.+.+.+....    +  ...++.++.+|+++.+  ++.+.
T Consensus        79 ~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~e--sI~~a  156 (576)
T PLN03209         79 DEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPD--QIGPA  156 (576)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHH--HHHHH
Confidence            689999999999999999999999999999988 5566655555443210    0  0135889999999977  66543


Q ss_pred             HHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC
Q 024517           77 VDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY  156 (266)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  156 (266)
                             ++++|+||||+|.. . .     ...++...+++|+.+..++++++.+.    + .++||++||..+.... .
T Consensus       157 -------LggiDiVVn~AG~~-~-~-----~v~d~~~~~~VN~~Gt~nLl~Aa~~a----g-VgRIV~VSSiga~~~g-~  216 (576)
T PLN03209        157 -------LGNASVVICCIGAS-E-K-----EVFDVTGPYRIDYLATKNLVDAATVA----K-VNHFILVTSLGTNKVG-F  216 (576)
T ss_pred             -------hcCCCEEEEccccc-c-c-----cccchhhHHHHHHHHHHHHHHHHHHh----C-CCEEEEEccchhcccC-c
Confidence                   46899999999863 2 1     12247788899999999998887653    2 4799999998763221 1


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      +. ..|. +|+++..+.+.+..++...||+++.|+||++.+++.... ..... .......+.++.++++ |||+.++++
T Consensus       217 p~-~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~-~t~~v-~~~~~d~~~gr~isre-DVA~vVvfL  291 (576)
T PLN03209        217 PA-AILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYK-ETHNL-TLSEEDTLFGGQVSNL-QVAELMACM  291 (576)
T ss_pred             cc-cchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccc-cccce-eeccccccCCCccCHH-HHHHHHHHH
Confidence            22 1244 788888888888888888999999999999998754321 01111 1112234566667776 999999999


Q ss_pred             ccCCCCcccccEEEEcCCc
Q 024517          237 ISDGSRYMTGTTIYVDGAQ  255 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~  255 (266)
                      +++.. .-.++++.+-.+-
T Consensus       292 asd~~-as~~kvvevi~~~  309 (576)
T PLN03209        292 AKNRR-LSYCKVVEVIAET  309 (576)
T ss_pred             HcCch-hccceEEEEEeCC
Confidence            98542 2345666665554

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.89  E-value=3.9e-21  Score=164.12  Aligned_cols=222  Identities=13%  Similarity=0.056  Sum_probs=156.0

Q ss_pred             CCcEEEEecCCCchHHH--HHHHHHHcCCeEEEEe-cccccH------------HHHHHHhcccCCCCCeEEEEEecCCC
Q 024517            4 QAKRVLLTSDGDEISKN--IAFHLAKRGCRLVLVG-NERRLS------------SVAEKMMGSLKGGQPVEVVGLDMEED   68 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~--ia~~l~~~g~~v~~~~-~~~~~~------------~~~~~~~~~~~~~~~~~~~~~D~~~~   68 (266)
                      -+|++||||+++|||.+  +|++| ++|++|++++ ..++.+            .+.+.+.+.   +..+..+.||+++.
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~---G~~a~~i~~DVss~  115 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA---GLYAKSINGDAFSD  115 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc---CCceEEEEcCCCCH
Confidence            46899999999999999  89999 9999988887 332211            233333322   35678899999999


Q ss_pred             chHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCC------------C----CC-----------------CCCHHHHHHHH
Q 024517           69 REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ------------D----PL-----------------QVGEDEFKKLV  115 (266)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~------------~----~~-----------------~~~~~~~~~~~  115 (266)
                      +  +++++++++.+.+|+||+||||++......            |    +.                 ..+.++++.++
T Consensus       116 E--~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv  193 (398)
T PRK13656        116 E--IKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTV  193 (398)
T ss_pred             H--HHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHH
Confidence            9  999999999999999999999998732111            0    11                 23455666555


Q ss_pred             Hccch-H--HHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc--hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEE
Q 024517          116 KINFV-A--PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA--AAYGACAASIHQLVRTAAMEIGKHKIRVNGI  190 (266)
Q Consensus       116 ~~n~~-~--~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~--~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v  190 (266)
                      .++-- .  .|.-.+...+.|.+   +++++.+|...+...  +|.|  ...+.+|++|+.-+|.|+.+|++.|||+|++
T Consensus       194 ~vMggedw~~Wi~al~~a~lla~---g~~~va~TY~G~~~t--~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i  268 (398)
T PRK13656        194 KVMGGEDWELWIDALDEAGVLAE---GAKTVAYSYIGPELT--HPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVS  268 (398)
T ss_pred             HhhccchHHHHHHHHHhcccccC---CcEEEEEecCCccee--ecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEE
Confidence            55443 1  12234444555643   689999999877666  5666  4889999999999999999999999999999


Q ss_pred             ecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          191 ARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       191 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      .+|.+.|......+.-+-+...+.+-  ++.-++-+ .+.+.+..|.++
T Consensus       269 ~~g~~~T~Ass~Ip~~~ly~~~l~kv--mk~~g~he-~~ieq~~rl~~~  314 (398)
T PRK13656        269 VLKAVVTQASSAIPVMPLYISLLFKV--MKEKGTHE-GCIEQIYRLFSE  314 (398)
T ss_pred             ecCcccchhhhcCCCcHHHHHHHHHH--HHhcCCCC-ChHHHHHHHHHH
Confidence            99999998765544322222111110  11123444 777777777654

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.89  E-value=2.3e-21  Score=166.87  Aligned_cols=235  Identities=15%  Similarity=0.171  Sum_probs=161.7

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |.-++|++|||||+|+||++++++|+++|++|+++. +.+..++...... ..+...++.++.+|+++.+  +++++++ 
T Consensus         1 ~~~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~d~~--~~~~~~~-   76 (325)
T PLN02989          1 MADGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLA-LDGAKERLKLFKADLLDEG--SFELAID-   76 (325)
T ss_pred             CCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHh-ccCCCCceEEEeCCCCCch--HHHHHHc-
Confidence            556789999999999999999999999999998887 5444433322221 1111246889999999988  8777764 


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC----
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL----  155 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~----  155 (266)
                            ++|++||+||....     ..+.+++...+++|+.+++++++++.+.+.    .++||++||..+..+..    
T Consensus        77 ------~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~----~~~iv~~SS~~~~~~~~~~~~  141 (325)
T PLN02989         77 ------GCETVFHTASPVAI-----TVKTDPQVELINPAVNGTINVLRTCTKVSS----VKRVILTSSMAAVLAPETKLG  141 (325)
T ss_pred             ------CCCEEEEeCCCCCC-----CCCCChHHHHHHHHHHHHHHHHHHHHHcCC----ceEEEEecchhheecCCccCC
Confidence                  58999999986311     223356788999999999999999987542    36999999986543210    


Q ss_pred             --------CCC--------chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--cHHHHHHHhhcc
Q 024517          156 --------YPG--------AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKLVREAA  217 (266)
Q Consensus       156 --------~~~--------~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~  217 (266)
                              .+.        ...|+.+|.+.+.+++.++++   .++.++.+.|+.+.+|.......  ............
T Consensus       142 ~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~  218 (325)
T PLN02989        142 PNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD---NEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKN  218 (325)
T ss_pred             CCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHH---cCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCC
Confidence                    011        246999999999999988776   37999999999999987543211  111222222222


Q ss_pred             CCC----CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCCc
Q 024517          218 PLH----RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       218 ~~~----~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      +..    .+...+ |+|++++.++....  . +..++++|+ .++..++
T Consensus       219 ~~~~~~r~~i~v~-Dva~a~~~~l~~~~--~-~~~~ni~~~-~~s~~ei  262 (325)
T PLN02989        219 PFNTTHHRFVDVR-DVALAHVKALETPS--A-NGRYIIDGP-VVTIKDI  262 (325)
T ss_pred             CCCCcCcCeeEHH-HHHHHHHHHhcCcc--c-CceEEEecC-CCCHHHH
Confidence            321    244455 99999998886532  2 346788544 5554433

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.88  E-value=5.2e-22  Score=157.20  Aligned_cols=199  Identities=14%  Similarity=0.141  Sum_probs=168.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCe-----EEEEe-cccccHHHHHHHhcccCC-CCCeEEEEEecCCCchHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCR-----LVLVG-NERRLSSVAEKMMGSLKG-GQPVEVVGLDMEEDREGAFDEA   76 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~-----v~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~v~~~   76 (266)
                      ..|++||||+++|||.++|.+|++....     +++++ +.++.++++.++.+.++. ..++.++.+|+++..  ++.++
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~--Sv~~A   79 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQ--SVFRA   79 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHH--HHHHH
Confidence            3689999999999999999999988643     55566 778999999999888763 467999999999999  99999


Q ss_pred             HHHHHHHhCCCCEEEEcCCCCCCCC-------------CC-------------CCCCHHHHHHHHHccchHHHHHHHHHH
Q 024517           77 VDKACQILGNLDAFVHCYTYEGKMQ-------------DP-------------LQVGEDEFKKLVKINFVAPWFLLKAVG  130 (266)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~~~~~~-------------~~-------------~~~~~~~~~~~~~~n~~~~~~l~~~~~  130 (266)
                      ..++.+.|.++|.+..|||.+...+             ++             ...+.+++...++.|+.|++++.+.+.
T Consensus        80 ~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~  159 (341)
T KOG1478|consen   80 SKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELE  159 (341)
T ss_pred             HHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhh
Confidence            9999999999999999999743221             10             123567899999999999999999999


Q ss_pred             HHHhccCCCCeEEEEecccccccCC-------CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccc
Q 024517          131 RRMKESKAGGSIVFLTSIIGAERGL-------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA  203 (266)
Q Consensus       131 ~~~~~~~~~g~iv~iss~~~~~~~~-------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~  203 (266)
                      |++..++ ...+|.+||..+.....       ..+..+|..||.+..-+.-++-+.+.+.|+--++++||..-|.++...
T Consensus       160 pll~~~~-~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~  238 (341)
T KOG1478|consen  160 PLLCHSD-NPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEY  238 (341)
T ss_pred             hHhhcCC-CCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhh
Confidence            9998877 56999999988754321       357889999999999999999999999999999999999988887765


Q ss_pred             cc
Q 024517          204 VG  205 (266)
Q Consensus       204 ~~  205 (266)
                      ..
T Consensus       239 l~  240 (341)
T KOG1478|consen  239 LN  240 (341)
T ss_pred             hh
Confidence            54

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.88  E-value=2.1e-21  Score=166.95  Aligned_cols=218  Identities=15%  Similarity=0.159  Sum_probs=152.8

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcC--CeEEEEec-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRG--CRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g--~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      +++|++|||||+|+||++++++|+++|  ++|+++++ .....+..+.+    . ..++.++.+|++|.+  ++.++++ 
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~----~-~~~~~~v~~Dl~d~~--~l~~~~~-   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF----P-APCLRFFIGDVRDKE--RLTRALR-   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh----C-CCcEEEEEccCCCHH--HHHHHHh-
Confidence            468999999999999999999999987  68888874 33222222222    1 146889999999988  7777664 


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                            ++|++||+||.. . .+....+   .+..+++|+.+++++++++.+.    + .++||++||....     .+.
T Consensus        74 ------~iD~Vih~Ag~~-~-~~~~~~~---~~~~~~~Nv~g~~~ll~aa~~~----~-~~~iV~~SS~~~~-----~p~  132 (324)
T TIGR03589        74 ------GVDYVVHAAALK-Q-VPAAEYN---PFECIRTNINGAQNVIDAAIDN----G-VKRVVALSTDKAA-----NPI  132 (324)
T ss_pred             ------cCCEEEECcccC-C-CchhhcC---HHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEeCCCCC-----CCC
Confidence                  589999999863 2 1222222   3568999999999999998763    2 3699999996432     234


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhc---cCCC------CCCCChhhHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA---APLH------RWLDVKNDLA  230 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~---~~~~------~~~~~~~dva  230 (266)
                      ..|+++|++.+.+++.++.+....|++++.+.||.+.+|... .  -..+.......   .|..      .+..++ |++
T Consensus       133 ~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~-~--i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~-D~a  208 (324)
T TIGR03589       133 NLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS-V--VPFFKSLKEEGVTELPITDPRMTRFWITLE-QGV  208 (324)
T ss_pred             CHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCC-c--HHHHHHHHHhCCCCeeeCCCCceEeeEEHH-HHH
Confidence            679999999999999998887788999999999999986421 1  11222221111   2221      134555 999


Q ss_pred             HHHHHHccCCCCcccccEEEEcCCccc
Q 024517          231 STVIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      ++++.++...   ..|+.+ +..|..+
T Consensus       209 ~a~~~al~~~---~~~~~~-~~~~~~~  231 (324)
T TIGR03589       209 NFVLKSLERM---LGGEIF-VPKIPSM  231 (324)
T ss_pred             HHHHHHHhhC---CCCCEE-ccCCCcE
Confidence            9999888542   246666 4444433

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.86  E-value=8.4e-21  Score=149.69  Aligned_cols=173  Identities=23%  Similarity=0.307  Sum_probs=133.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-eEEEEecc-c---ccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNE-R---RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++|||||.+|||..+++.|+++|. +|+++++. .   ..++..+++++.   +.++.++.||++|++  +++++++++.
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~---g~~v~~~~~Dv~d~~--~v~~~~~~~~   76 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA---GARVEYVQCDVTDPE--AVAAALAQLR   76 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT---T-EEEEEE--TTSHH--HHHHHHHTSH
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC---CCceeeeccCccCHH--HHHHHHHHHH
Confidence            689999999999999999999987 78888844 2   233455566544   679999999999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.+++|+.+||+||.. ...++.+.+.++++..+...+.+..++.+.+.+    .+ -..+|.+||+.+..+  .++...
T Consensus        77 ~~~~~i~gVih~ag~~-~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~-l~~~i~~SSis~~~G--~~gq~~  148 (181)
T PF08659_consen   77 QRFGPIDGVIHAAGVL-ADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RP-LDFFILFSSISSLLG--GPGQSA  148 (181)
T ss_dssp             TTSS-EEEEEE--------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TT-TSEEEEEEEHHHHTT---TTBHH
T ss_pred             hccCCcceeeeeeeee-cccccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CC-CCeEEEECChhHhcc--CcchHh
Confidence            9999999999999984 556888899999999999999999999988755    22 469999999999877  589999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCccc
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL  196 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~  196 (266)
                      |+++.+.++.|++....    .|.++.+|..|...
T Consensus       149 YaaAN~~lda~a~~~~~----~g~~~~sI~wg~W~  179 (181)
T PF08659_consen  149 YAAANAFLDALARQRRS----RGLPAVSINWGAWD  179 (181)
T ss_dssp             HHHHHHHHHHHHHHHHH----TTSEEEEEEE-EBS
T ss_pred             HHHHHHHHHHHHHHHHh----CCCCEEEEEccccC
Confidence            99999999999987655    36779999988764

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.86  E-value=5.5e-20  Score=158.10  Aligned_cols=234  Identities=15%  Similarity=0.145  Sum_probs=156.2

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |+..+|++|||||+|+||++++++|+++|++|+++. +.+..+... .+........++.++.+|+++.+  ++.++++ 
T Consensus         1 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~--~~~~~~~-   76 (322)
T PLN02986          1 MNGGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTE-HLLALDGAKERLKLFKADLLEES--SFEQAIE-   76 (322)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHH-HHHhccCCCCceEEEecCCCCcc--hHHHHHh-
Confidence            677899999999999999999999999999998777 444333322 22111111246889999999988  8777775 


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccc-cCC-C-
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAE-RGL-Y-  156 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~-~~~-~-  156 (266)
                            .+|++||+|+.... . .    .+....++++|+.++.++++++.+..   + -++||++||..+.. +.+ . 
T Consensus        77 ------~~d~vih~A~~~~~-~-~----~~~~~~~~~~nv~gt~~ll~~~~~~~---~-v~rvV~~SS~~~~~~~~~~~~  140 (322)
T PLN02986         77 ------GCDAVFHTASPVFF-T-V----KDPQTELIDPALKGTINVLNTCKETP---S-VKRVILTSSTAAVLFRQPPIE  140 (322)
T ss_pred             ------CCCEEEEeCCCcCC-C-C----CCchhhhhHHHHHHHHHHHHHHHhcC---C-ccEEEEecchhheecCCccCC
Confidence                  48999999986211 1 1    12235678999999999998875421   1 35899999986531 110 0 


Q ss_pred             ------------C-----CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-cHHHHHHHhhccC
Q 024517          157 ------------P-----GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-QERAVKLVREAAP  218 (266)
Q Consensus       157 ------------~-----~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~  218 (266)
                                  +     ....|+.+|.+.+.+++.+.+++   +++++.+.|+.+.+|....... .......+....+
T Consensus       141 ~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~  217 (322)
T PLN02986        141 ANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN---GIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKN  217 (322)
T ss_pred             CCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh---CCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCC
Confidence                        0     13569999999999999887763   7999999999999987543211 1111222111111


Q ss_pred             -----CCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCCc
Q 024517          219 -----LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       219 -----~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                           ...+...+ |+|++++.++....  ..| .++++| ..++..++
T Consensus       218 ~~~~~~~~~v~v~-Dva~a~~~al~~~~--~~~-~yni~~-~~~s~~e~  261 (322)
T PLN02986        218 LFNNRFYRFVDVR-DVALAHIKALETPS--ANG-RYIIDG-PIMSVNDI  261 (322)
T ss_pred             CCCCcCcceeEHH-HHHHHHHHHhcCcc--cCC-cEEEec-CCCCHHHH
Confidence                 11345566 99999999886532  234 677854 45554443

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.86  E-value=1.3e-19  Score=157.46  Aligned_cols=231  Identities=13%  Similarity=0.066  Sum_probs=157.4

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++|++|||||+|+||++++++|+++|++|++++ +..........+..    ..++.++.+|+++.+  ++.+++++. 
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~--~~~~~~~~~-   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL----AKKIEDHFGDIRDAA--KLRKAIAEF-   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh----cCCceEEEccCCCHH--HHHHHHhhc-
Confidence            5689999999999999999999999999999988 44333332222211    135778899999988  888888753 


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc--------
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER--------  153 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~--------  153 (266)
                          ++|++||+|+....     ..+.+++...+++|+.+++.+++++.+ +  .. .+++|++||......        
T Consensus        75 ----~~d~vih~A~~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a~~~-~--~~-~~~iv~~SS~~vyg~~~~~~~~~  141 (349)
T TIGR02622        75 ----KPEIVFHLAAQPLV-----RKSYADPLETFETNVMGTVNLLEAIRA-I--GS-VKAVVNVTSDKCYRNDEWVWGYR  141 (349)
T ss_pred             ----CCCEEEECCccccc-----ccchhCHHHHHHHhHHHHHHHHHHHHh-c--CC-CCEEEEEechhhhCCCCCCCCCc
Confidence                58999999985211     234456778899999999999998743 2  11 368999999643211        


Q ss_pred             --CCCCCchhhHHhHHHHHHHHHHHHHHhCC----CCcEEEEEecCcccCCCcccc-cccHHHHHHHhhccC--C-----
Q 024517          154 --GLYPGAAAYGACAASIHQLVRTAAMEIGK----HKIRVNGIARGLHLQDEYPIA-VGQERAVKLVREAAP--L-----  219 (266)
Q Consensus       154 --~~~~~~~~y~~sK~a~~~~~~~la~e~~~----~~i~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~--~-----  219 (266)
                        .+..+...|+.+|.+.+.+++.++.++..    ++++++.+.|+.+.+|..... .--..+........+  .     
T Consensus       142 e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~  221 (349)
T TIGR02622       142 ETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDA  221 (349)
T ss_pred             cCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCc
Confidence              01234678999999999999999988754    489999999999998743110 001122222211111  1     


Q ss_pred             -CCCCCChhhHHHHHHHHccCC--CCcccccEEEEcCC
Q 024517          220 -HRWLDVKNDLASTVIYLISDG--SRYMTGTTIYVDGA  254 (266)
Q Consensus       220 -~~~~~~~~dva~~~~~l~s~~--~~~~~G~~i~~dgG  254 (266)
                       ..+...+ |++++++.++...  .....|+.+++.+|
T Consensus       222 ~rd~i~v~-D~a~a~~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       222 TRPWQHVL-EPLSGYLLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             ccceeeHH-HHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence             1123334 9999988776431  11123578888654

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK06720 hypothetical protein; Provisional

Probab=99.85  E-value=4.4e-20  Score=143.44  Aligned_cols=143  Identities=15%  Similarity=0.207  Sum_probs=115.9

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|+++||||++|||+++|+.|+++|++|++++ +.+..++..+++.+.   +.+..++.+|+++.+  ++++++++
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~--~v~~~v~~   86 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL---GGEALFVSYDMEKQG--DWQRVISI   86 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEccCCCHH--HHHHHHHH
Confidence            567899999999999999999999999999999999 655566666666532   346778999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC------CCCeEEEEeccccc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK------AGGSIVFLTSIIGA  151 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~g~iv~iss~~~~  151 (266)
                      +.+.||++|++|||||......++++.+.++ ++  ..|+.+.++.++.+.+.|.+++      ..|++..||+.+..
T Consensus        87 ~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         87 TLNAFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence            9999999999999999855445555555555 44  7788888999999999987653      14788888886553

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.83  E-value=4e-19  Score=153.89  Aligned_cols=240  Identities=12%  Similarity=0.030  Sum_probs=153.6

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-ccccc-HHHHHHHhc-ccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRL-SSVAEKMMG-SLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~-~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      ++++|++|||||+|+||++++++|+++|++|++++ +.+.. ....+.+.. ....+.++.++.+|++|.+  ++.++++
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~--~~~~~~~   80 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDAS--SLRRWLD   80 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHH--HHHHHHH
Confidence            46789999999999999999999999999999988 33221 111222211 1111246889999999988  8888887


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC----
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG----  154 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~----  154 (266)
                      ..     .+|++||+|+.....     ...++.+..+++|+.++..+++++.+.+.+.+.-.++|++||.......    
T Consensus        81 ~~-----~~d~Vih~A~~~~~~-----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~  150 (340)
T PLN02653         81 DI-----KPDEVYNLAAQSHVA-----VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQ  150 (340)
T ss_pred             Hc-----CCCEEEECCcccchh-----hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCC
Confidence            64     589999999873221     2224457778999999999999998876542111378888875322110    


Q ss_pred             ----CCCCchhhHHhHHHHHHHHHHHHHHhCC---CCcEEEEEecCcccCCCcccccccHHHHHHHhhccC---------
Q 024517          155 ----LYPGAAAYGACAASIHQLVRTAAMEIGK---HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAP---------  218 (266)
Q Consensus       155 ----~~~~~~~y~~sK~a~~~~~~~la~e~~~---~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~---------  218 (266)
                          +..+...|+.+|.+.+.+++.++.+++-   .++.+|.+.|+.-.+. .....  ..+........+         
T Consensus       151 ~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~g~g~  227 (340)
T PLN02653        151 SETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENF-VTRKI--TRAVGRIKVGLQKKLFLGNLD  227 (340)
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCccc-chhHH--HHHHHHHHcCCCCceEeCCCc
Confidence                1124568999999999999999888642   2344456666643221 11100  111111111111         


Q ss_pred             -CCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          219 -LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       219 -~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                       ...+...+ |++++++.++...    .+..+++.+|..++..+
T Consensus       228 ~~rd~i~v~-D~a~a~~~~~~~~----~~~~yni~~g~~~s~~e  266 (340)
T PLN02653        228 ASRDWGFAG-DYVEAMWLMLQQE----KPDDYVVATEESHTVEE  266 (340)
T ss_pred             ceecceeHH-HHHHHHHHHHhcC----CCCcEEecCCCceeHHH
Confidence             11234455 9999999988642    24568888776655433

>PLN02650 dihydroflavonol-4-reductase

Probab=99.82  E-value=1.5e-18  Score=150.91  Aligned_cols=215  Identities=16%  Similarity=0.149  Sum_probs=147.3

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |--++|++|||||+|.||++++++|+++|++|++++ +.+.......... ......++.++..|+++.+  .+.++++ 
T Consensus         1 ~~~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~v~~Dl~d~~--~~~~~~~-   76 (351)
T PLN02650          1 MGSQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLD-LPGATTRLTLWKADLAVEG--SFDDAIR-   76 (351)
T ss_pred             CCCCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHh-ccCCCCceEEEEecCCChh--hHHHHHh-
Confidence            556789999999999999999999999999999887 4444443332221 1111135788999999988  7776664 


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC--CC
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL--YP  157 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~--~~  157 (266)
                            .+|++||+|+...    ...  .+..+..+++|+.++.++++++.+...    .++||++||........  .+
T Consensus        77 ------~~d~ViH~A~~~~----~~~--~~~~~~~~~~Nv~gt~~ll~aa~~~~~----~~r~v~~SS~~~~~~~~~~~~  140 (351)
T PLN02650         77 ------GCTGVFHVATPMD----FES--KDPENEVIKPTVNGMLSIMKACAKAKT----VRRIVFTSSAGTVNVEEHQKP  140 (351)
T ss_pred             ------CCCEEEEeCCCCC----CCC--CCchhhhhhHHHHHHHHHHHHHHhcCC----ceEEEEecchhhcccCCCCCC
Confidence                  5899999997531    111  122357789999999999999876421    25899999975432100  00


Q ss_pred             ------------------CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHH--HHhhc-
Q 024517          158 ------------------GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK--LVREA-  216 (266)
Q Consensus       158 ------------------~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~--~~~~~-  216 (266)
                                        ....|+.+|.+.+.+++.++.+   .|++++.+.|+.+.+|.............  ..... 
T Consensus       141 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~  217 (351)
T PLN02650        141 VYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNE  217 (351)
T ss_pred             ccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCc
Confidence                              1237999999999999998776   47999999999999986543211111111  01010 


Q ss_pred             -----cCCCCCCCChhhHHHHHHHHccC
Q 024517          217 -----APLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       217 -----~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                           .....+...+ |++++++.++..
T Consensus       218 ~~~~~~~~r~~v~V~-Dva~a~~~~l~~  244 (351)
T PLN02650        218 AHYSIIKQGQFVHLD-DLCNAHIFLFEH  244 (351)
T ss_pred             cccCcCCCcceeeHH-HHHHHHHHHhcC
Confidence                 1112455666 999999999864

>PLN02583 cinnamoyl-CoA reductase

Probab=99.82  E-value=8.4e-19  Score=149.07  Aligned_cols=223  Identities=14%  Similarity=0.095  Sum_probs=148.0

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +-++|++|||||+|+||++++++|+++|++|+++.|.....+..+.+......+.++.++.+|++|.+  ++.+++    
T Consensus         3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~--~~~~~l----   76 (297)
T PLN02583          3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYH--SILDAL----   76 (297)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHH--HHHHHH----
Confidence            34688999999999999999999999999999887432222221222211111246888999999988  766554    


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-CC----
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-LY----  156 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-~~----  156 (266)
                         .+.|.++|.++..   ..   .. .+++.++++|+.+++++++++.+.+.    -++||++||..+.... ..    
T Consensus        77 ---~~~d~v~~~~~~~---~~---~~-~~~~~~~~~nv~gt~~ll~aa~~~~~----v~riV~~SS~~a~~~~~~~~~~~  142 (297)
T PLN02583         77 ---KGCSGLFCCFDPP---SD---YP-SYDEKMVDVEVRAAHNVLEACAQTDT----IEKVVFTSSLTAVIWRDDNISTQ  142 (297)
T ss_pred             ---cCCCEEEEeCccC---Cc---cc-ccHHHHHHHHHHHHHHHHHHHHhcCC----ccEEEEecchHheecccccCCCC
Confidence               3589999876431   11   11 24678999999999999999987642    3699999998764211 00    


Q ss_pred             -------CC--------chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCC-
Q 024517          157 -------PG--------AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH-  220 (266)
Q Consensus       157 -------~~--------~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-  220 (266)
                             +.        ...|+.+|...+.+++.++++   .|++++.|.|+.|.+|......  . .........+.+ 
T Consensus       143 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~--~-~~~~~~~~~~~~~  216 (297)
T PLN02583        143 KDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHN--P-YLKGAAQMYENGV  216 (297)
T ss_pred             CCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCch--h-hhcCCcccCcccC
Confidence                   00        016999999999999888765   4799999999999998653211  1 100000011111 


Q ss_pred             -CCCCChhhHHHHHHHHccCCCCcccccEEEEcCC
Q 024517          221 -RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA  254 (266)
Q Consensus       221 -~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG  254 (266)
                       .+...+ |+|++.+..+...  ...| .+.+-++
T Consensus       217 ~~~v~V~-Dva~a~~~al~~~--~~~~-r~~~~~~  247 (297)
T PLN02583        217 LVTVDVN-FLVDAHIRAFEDV--SSYG-RYLCFNH  247 (297)
T ss_pred             cceEEHH-HHHHHHHHHhcCc--ccCC-cEEEecC
Confidence             245566 9999999988643  2334 4555444

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.81  E-value=6.3e-18  Score=147.20  Aligned_cols=232  Identities=14%  Similarity=0.127  Sum_probs=154.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEE-EecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVL-VGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      |++|||||+|+||++++++|.++|+.+++ +++.++..... .+.... .+.++.++.+|++|.+  +++++++.     
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~Dl~d~~--~~~~~~~~-----   72 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLM-SLAPVA-QSERFAFEKVDICDRA--ELARVFTE-----   72 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchh-hhhhcc-cCCceEEEECCCcChH--HHHHHHhh-----
Confidence            57999999999999999999999987554 44433221111 111111 1246788899999988  88888775     


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhc---c-CCCCeEEEEeccccccc-------
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE---S-KAGGSIVFLTSIIGAER-------  153 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~-~~~g~iv~iss~~~~~~-------  153 (266)
                      .++|+|||+||....     ..+.++++..+++|+.++..+++++.+.|..   . +...++|++||......       
T Consensus        73 ~~~D~Vih~A~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~  147 (355)
T PRK10217         73 HQPDCVMHLAAESHV-----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDF  147 (355)
T ss_pred             cCCCEEEECCcccCc-----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCC
Confidence            269999999986321     2234567899999999999999999876431   1 11258999998542110       


Q ss_pred             ----CCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhc--cCC-------C
Q 024517          154 ----GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA--APL-------H  220 (266)
Q Consensus       154 ----~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~--~~~-------~  220 (266)
                          .+..+...|+.+|.+.+.+++.+++++   ++++..+.|+.+..|.......-..+.......  .+.       .
T Consensus       148 ~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~  224 (355)
T PRK10217        148 FTETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIR  224 (355)
T ss_pred             cCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeee
Confidence                012356789999999999999998874   678888888888877542110011111111111  111       1


Q ss_pred             CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          221 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       221 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      .+...+ |+++++..++...   ..|+.+++.+|..++
T Consensus       225 ~~i~v~-D~a~a~~~~~~~~---~~~~~yni~~~~~~s  258 (355)
T PRK10217        225 DWLYVE-DHARALYCVATTG---KVGETYNIGGHNERK  258 (355)
T ss_pred             CcCcHH-HHHHHHHHHHhcC---CCCCeEEeCCCCccc
Confidence            234444 9999998887542   357889998886654

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.81  E-value=1.5e-17  Score=139.04  Aligned_cols=228  Identities=18%  Similarity=0.166  Sum_probs=165.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      .+++|+||||+|.||.+++++|+++|++|+.+.|....++..+.+.+..+...+...+..|+++.+  +.+++++     
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~--sf~~ai~-----   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEG--SFDKAID-----   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccc--hHHHHHh-----
Confidence            678999999999999999999999999999998443334443344433333457999999999999  8888885     


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-CC------
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-LY------  156 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-~~------  156 (266)
                        ++|+|+|.|.....    ...+  .-.++++..+.|+.++++++...=  +  =.+||+.||.++.... +.      
T Consensus        78 --gcdgVfH~Asp~~~----~~~~--~e~~li~pav~Gt~nVL~ac~~~~--s--VkrvV~TSS~aAv~~~~~~~~~~~v  145 (327)
T KOG1502|consen   78 --GCDGVFHTASPVDF----DLED--PEKELIDPAVKGTKNVLEACKKTK--S--VKRVVYTSSTAAVRYNGPNIGENSV  145 (327)
T ss_pred             --CCCEEEEeCccCCC----CCCC--cHHhhhhHHHHHHHHHHHHHhccC--C--cceEEEeccHHHhccCCcCCCCCcc
Confidence              59999999965211    1111  223789999999999999997652  1  1599999999988653 00      


Q ss_pred             -------------CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc--HHHHHHHhhccCCC-
Q 024517          157 -------------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ--ERAVKLVREAAPLH-  220 (266)
Q Consensus       157 -------------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~-  220 (266)
                                   .....|+.+|.-.+..++.++.|   +++...+|+|++|..|........  ....+.+....+.. 
T Consensus       146 vdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~  222 (327)
T KOG1502|consen  146 VDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYP  222 (327)
T ss_pred             cccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCC
Confidence                         01246899999999999999888   479999999999999988773322  22223332212211 


Q ss_pred             ----CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCcc
Q 024517          221 ----RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       221 ----~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                          .+.... |+|++-+.++..+.  -.|+.|-++...+
T Consensus       223 n~~~~~VdVr-DVA~AHv~a~E~~~--a~GRyic~~~~~~  259 (327)
T KOG1502|consen  223 NFWLAFVDVR-DVALAHVLALEKPS--AKGRYICVGEVVS  259 (327)
T ss_pred             CCceeeEeHH-HHHHHHHHHHcCcc--cCceEEEecCccc
Confidence                134556 99999999997644  4588887766655

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.80  E-value=1.2e-17  Score=146.92  Aligned_cols=229  Identities=14%  Similarity=0.163  Sum_probs=175.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++||++|||||+|.||+++|+++++.+. ++++.+ ++.+..+...+++..++ ..+..++-+|+.|.+  .++++++..
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~-~~~~~~~igdVrD~~--~~~~~~~~~  324 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP-ELKLRFYIGDVRDRD--RVERAMEGH  324 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC-CcceEEEecccccHH--HHHHHHhcC
Confidence            5799999999999999999999999988 677778 66677777788887766 378999999999999  888887653


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                           ++|+++|+|..-  .-|.-+   .+..+.+++|+.|+.++++++...-.     .++|.||+--+..|     ..
T Consensus       325 -----kvd~VfHAAA~K--HVPl~E---~nP~Eai~tNV~GT~nv~~aa~~~~V-----~~~V~iSTDKAV~P-----tN  384 (588)
T COG1086         325 -----KVDIVFHAAALK--HVPLVE---YNPEEAIKTNVLGTENVAEAAIKNGV-----KKFVLISTDKAVNP-----TN  384 (588)
T ss_pred             -----CCceEEEhhhhc--cCcchh---cCHHHHHHHhhHhHHHHHHHHHHhCC-----CEEEEEecCcccCC-----ch
Confidence                 699999999872  233333   34578899999999999999977643     49999999776554     56


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCC-------C-CCCChhhHHHH
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH-------R-WLDVKNDLAST  232 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~dva~~  232 (266)
                      .|+++|...+.++.+++......+-++.+|.-|.|....-.-   -+-+.+...+..|..       | |.+-+ |.++.
T Consensus       385 vmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSV---iPlFk~QI~~GgplTvTdp~mtRyfMTI~-EAv~L  460 (588)
T COG1086         385 VMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSV---IPLFKKQIAEGGPLTVTDPDMTRFFMTIP-EAVQL  460 (588)
T ss_pred             HhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCC---HHHHHHHHHcCCCccccCCCceeEEEEHH-HHHHH
Confidence            899999999999999998776657899999999986543211   233444444443321       1 23445 88888


Q ss_pred             HHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          233 VIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       233 ~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      ++.....   .-.|+++.+|.|..++-.+
T Consensus       461 VlqA~a~---~~gGeifvldMGepvkI~d  486 (588)
T COG1086         461 VLQAGAI---AKGGEIFVLDMGEPVKIID  486 (588)
T ss_pred             HHHHHhh---cCCCcEEEEcCCCCeEHHH
Confidence            8776643   5689999999998776443

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.79  E-value=1.2e-17  Score=149.12  Aligned_cols=180  Identities=17%  Similarity=0.131  Sum_probs=130.5

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccc-c----------------HHHHHHHhcccCCCCCeEEEEEec
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERR-L----------------SSVAEKMMGSLKGGQPVEVVGLDM   65 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~-~----------------~~~~~~~~~~~~~~~~~~~~~~D~   65 (266)
                      ++++++|||||+|+||++++++|+++|++|+++++..+ .                .+..+.+... . +.++.++.+|+
T Consensus        45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~-~~~v~~v~~Dl  122 (442)
T PLN02572         45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV-S-GKEIELYVGDI  122 (442)
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh-h-CCcceEEECCC
Confidence            57889999999999999999999999999999862111 0                0001111111 0 23688999999


Q ss_pred             CCCchHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEE
Q 024517           66 EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFL  145 (266)
Q Consensus        66 ~~~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~i  145 (266)
                      +|.+  ++.+++++.     ++|+|||+|+..  ..+....+.++++..+++|+.+++++++++...-.    ..++|++
T Consensus       123 ~d~~--~v~~~l~~~-----~~D~ViHlAa~~--~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv----~~~~V~~  189 (442)
T PLN02572        123 CDFE--FLSEAFKSF-----EPDAVVHFGEQR--SAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP----DCHLVKL  189 (442)
T ss_pred             CCHH--HHHHHHHhC-----CCCEEEECCCcc--cChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC----CccEEEE
Confidence            9988  888888763     699999998652  22333344566788899999999999998865421    2489999


Q ss_pred             ecccccccC----------------------CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCc
Q 024517          146 TSIIGAERG----------------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY  200 (266)
Q Consensus       146 ss~~~~~~~----------------------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~  200 (266)
                      ||.......                      +..+...|+.+|.+.+.+++..+..   .|+++..+.|+.+..|..
T Consensus       190 SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vyGp~~  263 (442)
T PLN02572        190 GTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRT  263 (442)
T ss_pred             ecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEecccccCCCC
Confidence            987532110                      0123457999999999999887765   579999999999998864

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.79  E-value=7.6e-18  Score=144.05  Aligned_cols=228  Identities=15%  Similarity=0.119  Sum_probs=153.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHcC--CeEEEEeccc--ccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRG--CRLVLVGNER--RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g--~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +++||||+|+||++++++|+++|  .+|+++++..  ...+..+.+..    ..++.++.+|+++++  ++.++++..  
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~--~~~~~~~~~--   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED----NPRYRFVKGDIGDRE--LVSRLFTEH--   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc----CCCcEEEEcCCcCHH--HHHHHHhhc--
Confidence            48999999999999999999987  6888776321  11111112211    236788999999988  888877642  


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc---------
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER---------  153 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~---------  153 (266)
                         ++|++||+|+....     ....++.+..+++|+.++..+++.+.+.+.    +.+++++||......         
T Consensus        73 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~~i~~Ss~~v~g~~~~~~~~~e  140 (317)
T TIGR01181        73 ---QPDAVVHFAAESHV-----DRSISGPAAFIETNVVGTYTLLEAVRKYWH----EFRFHHISTDEVYGDLEKGDAFTE  140 (317)
T ss_pred             ---CCCEEEEcccccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC----CceEEEeeccceeCCCCCCCCcCC
Confidence               59999999986321     223456678899999999999988866543    258999998542111         


Q ss_pred             -CCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCC---------CCC
Q 024517          154 -GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH---------RWL  223 (266)
Q Consensus       154 -~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~  223 (266)
                       .+..+...|+.+|.+.+.+++.++.+   .++++..+.|+.+..+......-............+..         .+.
T Consensus       141 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  217 (317)
T TIGR01181       141 TTPLAPSSPYSASKAASDHLVRAYHRT---YGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWL  217 (317)
T ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeE
Confidence             01123457999999999999998776   46899999999998875432110111112222221211         123


Q ss_pred             CChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          224 DVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       224 ~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      ..+ |+++++..++...   ..|+.+.+.++..++..+
T Consensus       218 ~v~-D~a~~~~~~~~~~---~~~~~~~~~~~~~~s~~~  251 (317)
T TIGR01181       218 YVE-DHCRAIYLVLEKG---RVGETYNIGGGNERTNLE  251 (317)
T ss_pred             EHH-HHHHHHHHHHcCC---CCCceEEeCCCCceeHHH
Confidence            344 9999999888642   457889887776655433

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.79  E-value=1.4e-17  Score=145.04  Aligned_cols=178  Identities=16%  Similarity=0.107  Sum_probs=128.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +++++|||||+|.||++++++|+++|++|++++ +.+..+.....+..    +.++.++.+|+++.+  ++.++++    
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~--~~~~~~~----   78 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE----GDRLRLFRADLQEEG--SFDEAVK----   78 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc----CCeEEEEECCCCCHH--HHHHHHc----
Confidence            578999999999999999999999999999887 43333333332221    246889999999988  7766663    


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHH--HHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC-----
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEF--KKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL-----  155 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~-----  155 (266)
                         .+|+|||+|+...........+.+++  .++++.|+.++..+++++.+..   . .+++|++||.......+     
T Consensus        79 ---~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~-~~~~v~~SS~~vyg~~~~~~~~  151 (353)
T PLN02896         79 ---GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---T-VKRVVFTSSISTLTAKDSNGRW  151 (353)
T ss_pred             ---CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---C-ccEEEEEechhhccccccCCCC
Confidence               58999999987432211122233332  4567888899999999887652   1 36899999975432100     


Q ss_pred             ---------C---------CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcc
Q 024517          156 ---------Y---------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYP  201 (266)
Q Consensus       156 ---------~---------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~  201 (266)
                               .         +....|+.+|.+.+.+++.++++   .++++..+.|+.+.+|...
T Consensus       152 ~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~~~  212 (353)
T PLN02896        152 RAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKE---NGIDLVSVITTTVAGPFLT  212 (353)
T ss_pred             CCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCcC
Confidence                     0         11237999999999999988776   3799999999999998653

>PLN02240 UDP-glucose 4-epimerase

Probab=99.79  E-value=1.2e-17  Score=145.17  Aligned_cols=242  Identities=15%  Similarity=0.167  Sum_probs=154.9

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHHHHHHHhcccC-CCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLK-GGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |++++|++|||||+|+||++++++|+++|++|+++++ .....+....+..... .+.++.++.+|+++.+  ++.++++
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--~l~~~~~   78 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKE--ALEKVFA   78 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHH--HHHHHHH
Confidence            8899999999999999999999999999999999873 2222222222221110 1246788999999988  8888776


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC----
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG----  154 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~----  154 (266)
                      .     .++|++||+|+....     ..+.+++...+++|+.++..+++++..    .+ .+++|++||.......    
T Consensus        79 ~-----~~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~vyg~~~~~~  143 (352)
T PLN02240         79 S-----TRFDAVIHFAGLKAV-----GESVAKPLLYYDNNLVGTINLLEVMAK----HG-CKKLVFSSSATVYGQPEEVP  143 (352)
T ss_pred             h-----CCCCEEEEccccCCc-----cccccCHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEccHHHhCCCCCCC
Confidence            5     279999999986321     123356778999999999999886533    22 3589999996322110    


Q ss_pred             -----CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcc----ccc-c-cH---HHHHHHh-hccC-
Q 024517          155 -----LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYP----IAV-G-QE---RAVKLVR-EAAP-  218 (266)
Q Consensus       155 -----~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~----~~~-~-~~---~~~~~~~-~~~~-  218 (266)
                           +..+...|+.+|.+.+.+++.++.+  ..++.+..+.|+.+..+.-.    +.. . ..   .+..... ...| 
T Consensus       144 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  221 (352)
T PLN02240        144 CTEEFPLSATNPYGRTKLFIEEICRDIHAS--DPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPE  221 (352)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCc
Confidence                 1224578999999999999988765  23577777776555443110    000 0 00   1111111 1111 


Q ss_pred             C-----------C----CCCCChhhHHHHHHHHccCC--CCcccccEEEEcCCccccCCCc
Q 024517          219 L-----------H----RWLDVKNDLASTVIYLISDG--SRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       219 ~-----------~----~~~~~~~dva~~~~~l~s~~--~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      .           +    .+...+ |++++++.++...  .....|+.+++.+|..++..++
T Consensus       222 ~~~~g~~~~~~~g~~~~~~i~v~-D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el  281 (352)
T PLN02240        222 LTVFGNDYPTKDGTGVRDYIHVM-DLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEM  281 (352)
T ss_pred             eEEeCCCCCCCCCCEEEeeEEHH-HHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHH
Confidence            1           0    123344 9999888776431  1234578999988877655443

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.78  E-value=2.4e-17  Score=142.60  Aligned_cols=174  Identities=14%  Similarity=0.144  Sum_probs=126.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++++++|||||+|+||++++++|+++|++|+++. +.+...... .+... ....++.++.+|++|.+  ++.++++   
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~~~Dl~d~~--~~~~~~~---   79 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIA-HLRAL-QELGDLKIFGADLTDEE--SFEAPIA---   79 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH-HHHhc-CCCCceEEEEcCCCChH--HHHHHHh---
Confidence            3689999999999999999999999999998777 433332221 11111 11136788999999988  7776653   


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-------
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-------  154 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-------  154 (266)
                          ++|++||+|+.. .   ..  ..+.+...+++|+.++..+++++.+..   + .+++|++||.+.....       
T Consensus        80 ----~~d~vih~A~~~-~---~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~---~-~~~~v~~SS~~~~g~~~~~~~~~  145 (338)
T PLN00198         80 ----GCDLVFHVATPV-N---FA--SEDPENDMIKPAIQGVHNVLKACAKAK---S-VKRVILTSSAAAVSINKLSGTGL  145 (338)
T ss_pred             ----cCCEEEEeCCCC-c---cC--CCChHHHHHHHHHHHHHHHHHHHHhcC---C-ccEEEEeecceeeeccCCCCCCc
Confidence                589999999752 1   11  112345678999999999999986642   1 3699999997654310       


Q ss_pred             ---------------CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCc
Q 024517          155 ---------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY  200 (266)
Q Consensus       155 ---------------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~  200 (266)
                                     ..++...|+.+|.+.+.+++.++++   .|+++..+.|+.+.+|..
T Consensus       146 ~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~~  203 (338)
T PLN00198        146 VMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPSL  203 (338)
T ss_pred             eeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCCc
Confidence                           0123457999999999999988776   479999999999998864

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.78  E-value=5.2e-17  Score=139.52  Aligned_cols=222  Identities=18%  Similarity=0.213  Sum_probs=146.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++|++|||||+|.||++++++|+++|++|+++. +.+..... ..+........++.++.+|+++.+  ++.++++    
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~--~~~~~~~----   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKT-EHLLALDGAKERLHLFKANLLEEG--SFDSVVD----   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhH-HHHHhccCCCCceEEEeccccCcc--hHHHHHc----
Confidence            578999999999999999999999999999887 44332222 222111111146889999999988  7776664    


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccc-ccC-C-----
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGA-ERG-L-----  155 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~-~~~-~-----  155 (266)
                         ++|++||+|+....  ..  .  +..+..+++|+.++.++++++....   + ..++|++||..+. ++. +     
T Consensus        76 ---~~d~Vih~A~~~~~--~~--~--~~~~~~~~~nv~gt~~ll~a~~~~~---~-~~~~v~~SS~~~~~y~~~~~~~~~  142 (322)
T PLN02662         76 ---GCEGVFHTASPFYH--DV--T--DPQAELIDPAVKGTLNVLRSCAKVP---S-VKRVVVTSSMAAVAYNGKPLTPDV  142 (322)
T ss_pred             ---CCCEEEEeCCcccC--CC--C--ChHHHHHHHHHHHHHHHHHHHHhCC---C-CCEEEEccCHHHhcCCCcCCCCCC
Confidence               58999999976321  11  1  1125788999999999999986532   1 3589999997542 211 0     


Q ss_pred             -----C---C-----CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-cHHH-HHHHhh--ccC
Q 024517          156 -----Y---P-----GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-QERA-VKLVRE--AAP  218 (266)
Q Consensus       156 -----~---~-----~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~-~~~~~~--~~~  218 (266)
                           .   +     ....|+.+|.+.+.+++.+.++   .++++..+.|+.+.+|....... .... .+....  ..|
T Consensus       143 ~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~  219 (322)
T PLN02662        143 VVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFP  219 (322)
T ss_pred             cCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCC
Confidence                 0   1     0137999999999999887765   47999999999999986533211 1111 111111  111


Q ss_pred             C--CCCCCChhhHHHHHHHHccCCCCcccccEEEEc
Q 024517          219 L--HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD  252 (266)
Q Consensus       219 ~--~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~d  252 (266)
                      .  ..+...+ |+|++++.++....  ..|. +.+.
T Consensus       220 ~~~~~~i~v~-Dva~a~~~~~~~~~--~~~~-~~~~  251 (322)
T PLN02662        220 NASYRWVDVR-DVANAHIQAFEIPS--ASGR-YCLV  251 (322)
T ss_pred             CCCcCeEEHH-HHHHHHHHHhcCcC--cCCc-EEEe
Confidence            1  1245555 99999999886432  2354 4453

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.76  E-value=1.8e-16  Score=137.91  Aligned_cols=231  Identities=16%  Similarity=0.140  Sum_probs=149.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCe-EEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCR-LVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      ++|||||+|+||++++++|+++|+. |+.+++...... ...+..... ..++.++.+|++|.+  ++++++++     .
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~Dl~d~~--~~~~~~~~-----~   72 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGN-LESLADVSD-SERYVFEHADICDRA--ELDRIFAQ-----H   72 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccch-HHHHHhccc-CCceEEEEecCCCHH--HHHHHHHh-----c
Confidence            5899999999999999999999986 444543221111 111111111 246788999999988  88888865     3


Q ss_pred             CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC----CCCeEEEEeccccccc--------
Q 024517           86 NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK----AGGSIVFLTSIIGAER--------  153 (266)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~~g~iv~iss~~~~~~--------  153 (266)
                      ++|++||+|+.... .    ...++.+..+++|+.++.++++++.++|.+..    ...++|++||......        
T Consensus        73 ~~d~vih~A~~~~~-~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~  147 (352)
T PRK10084         73 QPDAVMHLAAESHV-D----RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVE  147 (352)
T ss_pred             CCCEEEECCcccCC-c----chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccc
Confidence            69999999986322 1    11233467899999999999999998764321    1248999998643221        


Q ss_pred             -----------CCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCC--
Q 024517          154 -----------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH--  220 (266)
Q Consensus       154 -----------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~--  220 (266)
                                 .+..+...|+.+|.+.+.+++.+++++   ++++..+.|+.+..|.......-...........+..  
T Consensus       148 ~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~  224 (352)
T PRK10084        148 NSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIY  224 (352)
T ss_pred             ccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEe
Confidence                       012345689999999999999988774   5667777888887765321100111112221111111  


Q ss_pred             -------CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          221 -------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       221 -------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                             .+...+ |+++++..++...   ..|+.+++.++..++
T Consensus       225 ~~g~~~~~~v~v~-D~a~a~~~~l~~~---~~~~~yni~~~~~~s  265 (352)
T PRK10084        225 GKGDQIRDWLYVE-DHARALYKVVTEG---KAGETYNIGGHNEKK  265 (352)
T ss_pred             CCCCeEEeeEEHH-HHHHHHHHHHhcC---CCCceEEeCCCCcCc
Confidence                   123344 9999998887642   357888887775543

>PLN02214 cinnamoyl-CoA reductase

Probab=99.76  E-value=1.3e-16  Score=138.27  Aligned_cols=217  Identities=18%  Similarity=0.181  Sum_probs=147.6

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHHH-HHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSV-AEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++|++|||||+|.||++++++|+++|++|+++++ .+..... ...+..   ...++.++.+|+++.+  ++.++++  
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~--~~~~~~~--   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG---GKERLILCKADLQDYE--ALKAAID--   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC---CCCcEEEEecCcCChH--HHHHHHh--
Confidence            56889999999999999999999999999999884 3322211 122211   1235788999999988  7777664  


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC----
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY----  156 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~----  156 (266)
                           ++|++||+|+.. .         ++++..+++|+.++..+++++.+.    + -+++|++||..+.++.+.    
T Consensus        81 -----~~d~Vih~A~~~-~---------~~~~~~~~~nv~gt~~ll~aa~~~----~-v~r~V~~SS~~avyg~~~~~~~  140 (342)
T PLN02214         81 -----GCDGVFHTASPV-T---------DDPEQMVEPAVNGAKFVINAAAEA----K-VKRVVITSSIGAVYMDPNRDPE  140 (342)
T ss_pred             -----cCCEEEEecCCC-C---------CCHHHHHHHHHHHHHHHHHHHHhc----C-CCEEEEeccceeeeccCCCCCC
Confidence                 589999999752 1         235678999999999999988653    2 358999999765442100    


Q ss_pred             ---------------CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc--HHHHHHHhhccCC
Q 024517          157 ---------------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ--ERAVKLVREAAPL  219 (266)
Q Consensus       157 ---------------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~  219 (266)
                                     .....|+.+|.+.+.+++.++.+   .|+++..+.|+.|..|........  ...........+.
T Consensus       141 ~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~  217 (342)
T PLN02214        141 AVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKE---KGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKT  217 (342)
T ss_pred             cccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccc
Confidence                           02347999999999999988776   479999999999999864321110  1111111111111


Q ss_pred             -----CCCCCChhhHHHHHHHHccCCCCcccccEEEEcC
Q 024517          220 -----HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG  253 (266)
Q Consensus       220 -----~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg  253 (266)
                           ..+...+ |+|++++.++...  ...| .+++.+
T Consensus       218 ~~~~~~~~i~V~-Dva~a~~~al~~~--~~~g-~yn~~~  252 (342)
T PLN02214        218 YANLTQAYVDVR-DVALAHVLVYEAP--SASG-RYLLAE  252 (342)
T ss_pred             CCCCCcCeeEHH-HHHHHHHHHHhCc--ccCC-cEEEec
Confidence                 1234455 9999999888643  2334 455644

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.75  E-value=1.7e-16  Score=137.94  Aligned_cols=235  Identities=10%  Similarity=-0.013  Sum_probs=153.1

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHHHHHHHhcccC--CCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLK--GGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      +++|++|||||+|.||.+++++|+++|++|+++++ ...............+  ...++.++.+|+.+.+  ++.++++ 
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~--~l~~~~~-   89 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFT--DCQKACK-   89 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHH--HHHHHhh-
Confidence            56789999999999999999999999999999983 3322222222211110  0135788999999977  6666653 


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-----
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-----  154 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-----  154 (266)
                            .+|+|||.|+.....     ...++....+++|+.++.++++.+..    .+ ..++|++||.......     
T Consensus        90 ------~~d~ViHlAa~~~~~-----~~~~~~~~~~~~Nv~gt~nll~~~~~----~~-~~~~v~~SS~~vyg~~~~~~~  153 (348)
T PRK15181         90 ------NVDYVLHQAALGSVP-----RSLKDPIATNSANIDGFLNMLTAARD----AH-VSSFTYAASSSTYGDHPDLPK  153 (348)
T ss_pred             ------CCCEEEECccccCch-----hhhhCHHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEeechHhhCCCCCCCC
Confidence                  489999999863211     12233456799999999999988743    22 3589999987432211     


Q ss_pred             ----CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc----ccHHHHHHHhhccCCCC-----
Q 024517          155 ----LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV----GQERAVKLVREAAPLHR-----  221 (266)
Q Consensus       155 ----~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~-----  221 (266)
                          ...+...|+.+|.+.+.+++.++.+   .++++..+.|+.+..|......    .-..+........+..-     
T Consensus       154 ~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~  230 (348)
T PRK15181        154 IEERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGS  230 (348)
T ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCC
Confidence                0123457999999999999887665   4799999999999987542210    01122222221112111     


Q ss_pred             ----CCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCC
Q 024517          222 ----WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       222 ----~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                          +... +|++++++.++........|+.+++.+|..++..
T Consensus       231 ~~rd~i~v-~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~  272 (348)
T PRK15181        231 TSRDFCYI-ENVIQANLLSATTNDLASKNKVYNVAVGDRTSLN  272 (348)
T ss_pred             ceEeeEEH-HHHHHHHHHHHhcccccCCCCEEEecCCCcEeHH
Confidence                1223 4999998876643222346788999877665443

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.75  E-value=1e-16  Score=139.05  Aligned_cols=234  Identities=11%  Similarity=0.036  Sum_probs=144.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEecc-ccc-HHHHHHHhccc-C-CCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-RRL-SSVAEKMMGSL-K-GGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~-~~~-~~~~~~~~~~~-~-~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      |++|||||+|+||++++++|+++|++|+++++. +.. .+....+.+.. . .+.++.++.+|++|.+  ++.++++.. 
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~--~l~~~~~~~-   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSS--NLRRIIDEI-   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHH--HHHHHHHhC-
Confidence            689999999999999999999999999998833 211 11111111100 0 0136889999999988  888888763 


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-------
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-------  154 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-------  154 (266)
                          ++|++||+|+.....     ...++-...+++|+.++.++++++.+.-.++  ..++|++||..-....       
T Consensus        78 ----~~d~ViH~Aa~~~~~-----~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~--~~~~v~~SS~~vyg~~~~~~~~E  146 (343)
T TIGR01472        78 ----KPTEIYNLAAQSHVK-----VSFEIPEYTADVDGIGTLRLLEAVRTLGLIK--SVKFYQASTSELYGKVQEIPQNE  146 (343)
T ss_pred             ----CCCEEEECCcccccc-----hhhhChHHHHHHHHHHHHHHHHHHHHhCCCc--CeeEEEeccHHhhCCCCCCCCCC
Confidence                589999999863221     1112235677889999999999997742111  2479999986432110       


Q ss_pred             --CCCCchhhHHhHHHHHHHHHHHHHHhCCC---CcEEEEEecCcccCCCcccccccHHHHHHHhhcc----------CC
Q 024517          155 --LYPGAAAYGACAASIHQLVRTAAMEIGKH---KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAA----------PL  219 (266)
Q Consensus       155 --~~~~~~~y~~sK~a~~~~~~~la~e~~~~---~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~----------~~  219 (266)
                        +..+...|+.+|.+.+.+++.++++++-.   ++.+|...|+.-.. .....  -..+........          ..
T Consensus       147 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~g~g~~~  223 (343)
T TIGR01472       147 TTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGEN-FVTRK--ITRAAAKIKLGLQEKLYLGNLDAK  223 (343)
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCcc-ccchH--HHHHHHHHHcCCCCceeeCCCccc
Confidence              12356789999999999999998875321   12234444542111 00000  011111111110          11


Q ss_pred             CCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          220 HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       220 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      ..+...+ |++++++.++...    .+..+++.+|..++..+
T Consensus       224 rd~i~V~-D~a~a~~~~~~~~----~~~~yni~~g~~~s~~e  260 (343)
T TIGR01472       224 RDWGHAK-DYVEAMWLMLQQD----KPDDYVIATGETHSVRE  260 (343)
T ss_pred             cCceeHH-HHHHHHHHHHhcC----CCccEEecCCCceeHHH
Confidence            1234455 9999998888543    13468887776655443

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.73  E-value=2.4e-17  Score=136.52  Aligned_cols=225  Identities=17%  Similarity=0.230  Sum_probs=150.4

Q ss_pred             EEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCe----EEEEEecCCCchHHHHHHHHHHH
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPV----EVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ||||||+|.||+++|++|++.+. ++++++ ++..+-++..++....+. .++    ..+.+|++|.+  .+++++++. 
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~-~~v~~~~~~vigDvrd~~--~l~~~~~~~-   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPD-PKVRFEIVPVIGDVRDKE--RLNRIFEEY-   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC---TTCEEEEE--CTSCCHHH--HHHHHTT---
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccc-cCcccccCceeecccCHH--HHHHHHhhc-
Confidence            79999999999999999999986 788999 666777777777544332 233    34577999887  777777543 


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                          ++|+++|.|..- + -++.+   +...+.+++|+.|+.++++++..+-     -.++|+||+--+..     +...
T Consensus        77 ----~pdiVfHaAA~K-h-Vpl~E---~~p~eav~tNv~GT~nv~~aa~~~~-----v~~~v~ISTDKAv~-----Ptnv  137 (293)
T PF02719_consen   77 ----KPDIVFHAAALK-H-VPLME---DNPFEAVKTNVLGTQNVAEAAIEHG-----VERFVFISTDKAVN-----PTNV  137 (293)
T ss_dssp             ----T-SEEEE--------HHHHC---CCHHHHHHHHCHHHHHHHHHHHHTT------SEEEEEEECGCSS-------SH
T ss_pred             ----CCCEEEEChhcC-C-CChHH---hCHHHHHHHHHHHHHHHHHHHHHcC-----CCEEEEccccccCC-----CCcH
Confidence                799999999862 2 22222   2457889999999999999998753     25999999976644     3578


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCC-------CC-CCCChhhHHHHH
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPL-------HR-WLDVKNDLASTV  233 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~dva~~~  233 (266)
                      |+++|...+.++.+.+...+..+.++.+|.-|.|....-.-   -+-+.+......|+       .| +.+.+ |.++.+
T Consensus       138 mGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSV---ip~F~~Qi~~g~PlTvT~p~mtRffmti~-EAv~Lv  213 (293)
T PF02719_consen  138 MGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSV---IPLFKKQIKNGGPLTVTDPDMTRFFMTIE-EAVQLV  213 (293)
T ss_dssp             HHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSC---HHHHHHHHHTTSSEEECETT-EEEEE-HH-HHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcH---HHHHHHHHHcCCcceeCCCCcEEEEecHH-HHHHHH
Confidence            99999999999999998876778999999999986432111   24455555555443       12 34555 888888


Q ss_pred             HHHccCCCCcccccEEEEcCCccccCCCc
Q 024517          234 IYLISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       234 ~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      +..+.-   ...|+++..|.|..+.--++
T Consensus       214 l~a~~~---~~~geifvl~mg~~v~I~dl  239 (293)
T PF02719_consen  214 LQAAAL---AKGGEIFVLDMGEPVKILDL  239 (293)
T ss_dssp             HHHHHH-----TTEEEEE---TCEECCCH
T ss_pred             HHHHhh---CCCCcEEEecCCCCcCHHHH
Confidence            877643   24799999999988765544

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.72  E-value=3.3e-16  Score=136.43  Aligned_cols=233  Identities=18%  Similarity=0.197  Sum_probs=145.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcC--CeEEEEecccccHHHHHH----HhcccC---C-C-CCeEEEEEecCCCchHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRG--CRLVLVGNERRLSSVAEK----MMGSLK---G-G-QPVEVVGLDMEEDREGAFDE   75 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g--~~v~~~~~~~~~~~~~~~----~~~~~~---~-~-~~~~~~~~D~~~~~~~~v~~   75 (266)
                      +++||||+|+||++++++|+++|  ++|+++.|....+...++    +.....   . . .++.++.+|++++..+-...
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999999  678888754332222222    211100   0 0 37889999998763100011


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC
Q 024517           76 AVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL  155 (266)
Q Consensus        76 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~  155 (266)
                      ...++   ...+|++||||+.....        ..++...+.|+.++..+++.+...    + ..+++++||........
T Consensus        81 ~~~~~---~~~~d~vih~a~~~~~~--------~~~~~~~~~nv~g~~~ll~~a~~~----~-~~~~v~iSS~~v~~~~~  144 (367)
T TIGR01746        81 EWERL---AENVDTIVHNGALVNWV--------YPYSELRAANVLGTREVLRLAASG----R-AKPLHYVSTISVLAAID  144 (367)
T ss_pred             HHHHH---HhhCCEEEeCCcEeccC--------CcHHHHhhhhhHHHHHHHHHHhhC----C-CceEEEEccccccCCcC
Confidence            12222   24699999999863221        235667789999999988877542    2 34699999986543210


Q ss_pred             --------------CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHH-HHHh-----h
Q 024517          156 --------------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV-KLVR-----E  215 (266)
Q Consensus       156 --------------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~-~~~~-----~  215 (266)
                                    ......|+.+|.+.+.+++.++.    .|++++.+.||.+.++............ ....     .
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~  220 (367)
T TIGR01746       145 LSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALG  220 (367)
T ss_pred             CCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhC
Confidence                          01134799999999999877644    3899999999999986322111111111 1111     1


Q ss_pred             ccCCC----CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccC
Q 024517          216 AAPLH----RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       216 ~~~~~----~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      ..|..    ....+.+|++++++.++.......+|+.+.+.++..++-
T Consensus       221 ~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~  268 (367)
T TIGR01746       221 AYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSL  268 (367)
T ss_pred             CCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCH
Confidence            22221    112334599999999986654335588999988655543

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.72  E-value=7.2e-16  Score=133.34  Aligned_cols=234  Identities=14%  Similarity=0.114  Sum_probs=147.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      ++|||||+|+||++++++|+++|++|+++++ .+........+... . +.++.++.+|++|.+  ++.++++.     .
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~Dl~d~~--~~~~~~~~-----~   72 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL-G-GKHPTFVEGDIRNEA--LLTEILHD-----H   72 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh-c-CCCceEEEccCCCHH--HHHHHHhc-----C
Confidence            5899999999999999999999999998873 23222222222211 1 235678899999988  77777753     3


Q ss_pred             CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---------CC
Q 024517           86 NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---------LY  156 (266)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~~  156 (266)
                      ++|++||+|+.... .    ...++....+++|+.++..+++++.    +.+ .+++|++||.......         +.
T Consensus        73 ~~d~vvh~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~Ss~~~yg~~~~~~~~E~~~~  142 (338)
T PRK10675         73 AIDTVIHFAGLKAV-G----ESVQKPLEYYDNNVNGTLRLISAMR----AAN-VKNLIFSSSATVYGDQPKIPYVESFPT  142 (338)
T ss_pred             CCCEEEECCccccc-c----chhhCHHHHHHHHHHHHHHHHHHHH----HcC-CCEEEEeccHHhhCCCCCCccccccCC
Confidence            69999999986322 1    1123345678999999999887653    333 3689999996432110         00


Q ss_pred             -CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc------cH---HHHHHHh-hcc--------
Q 024517          157 -PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG------QE---RAVKLVR-EAA--------  217 (266)
Q Consensus       157 -~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~------~~---~~~~~~~-~~~--------  217 (266)
                       .+...|+.+|.+.+.+++.++++.  .++++..+.|+.+..+.-...+.      ..   ....... ...        
T Consensus       143 ~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (338)
T PRK10675        143 GTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGN  220 (338)
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHhc--CCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCC
Confidence             236789999999999999987663  24677777765555432100000      01   1111111 111        


Q ss_pred             --C--CC----CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCCc
Q 024517          218 --P--LH----RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       218 --~--~~----~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                        |  .+    .+...+ |+|++++.++........|+.+++.+|..++..++
T Consensus       221 ~~~~~~g~~~~~~v~v~-D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~  272 (338)
T PRK10675        221 DYPTEDGTGVRDYIHVM-DLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDV  272 (338)
T ss_pred             cCCCCCCcEEEeeEEHH-HHHHHHHHHHHhhhccCCCceEEecCCCceeHHHH
Confidence              1  01    133444 99999888875321223468999988877665554

>PLN02686 cinnamoyl-CoA reductase

Probab=99.71  E-value=6.8e-16  Score=134.92  Aligned_cols=232  Identities=14%  Similarity=0.093  Sum_probs=145.2

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccC---CCCCeEEEEEecCCCchHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLK---GGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      .++|++|||||+++||++++++|+++|++|+++. +.+..+.+ +.+.....   ....+.++.+|++|.+  ++.++++
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~--~l~~~i~  127 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPE--SLHEAFD  127 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHH--HHHHHHH
Confidence            4689999999999999999999999999998876 44333332 22211000   0125788899999988  8777775


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc-ccc----
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG-AER----  153 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~-~~~----  153 (266)
                             .+|.++|.++...+.. ...    ......++|+.++..+++++...   .+ -.++|++||..+ .++    
T Consensus       128 -------~~d~V~hlA~~~~~~~-~~~----~~~~~~~~nv~gt~~llea~~~~---~~-v~r~V~~SS~~~~vyg~~~~  191 (367)
T PLN02686        128 -------GCAGVFHTSAFVDPAG-LSG----YTKSMAELEAKASENVIEACVRT---ES-VRKCVFTSSLLACVWRQNYP  191 (367)
T ss_pred             -------hccEEEecCeeecccc-ccc----ccchhhhhhHHHHHHHHHHHHhc---CC-ccEEEEeccHHHhcccccCC
Confidence                   3689999987642221 100    11234567888888888886542   11 258999999642 110    


Q ss_pred             CC----------------CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhcc
Q 024517          154 GL----------------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAA  217 (266)
Q Consensus       154 ~~----------------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~  217 (266)
                      ..                ..+...|+.+|.+.+.+++.++++   .|++++.|.|+.|.+|...... ............
T Consensus       192 ~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~~-~~~~~~~~~g~~  267 (367)
T PLN02686        192 HDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRRN-STATIAYLKGAQ  267 (367)
T ss_pred             CCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCCC-ChhHHHHhcCCC
Confidence            00                012346999999999999988776   5899999999999998643211 111111111111


Q ss_pred             CC---C--CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccC
Q 024517          218 PL---H--RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       218 ~~---~--~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      +.   +  .+...+ |++++++.++........|..+ +-+|..++.
T Consensus       268 ~~~g~g~~~~v~V~-Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~  312 (367)
T PLN02686        268 EMLADGLLATADVE-RLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSR  312 (367)
T ss_pred             ccCCCCCcCeEEHH-HHHHHHHHHHhccCCCCCCCcE-EEeCCCccH
Confidence            11   1  234455 9999998888532122345555 434444443

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.71  E-value=1.5e-15  Score=123.78  Aligned_cols=229  Identities=17%  Similarity=0.142  Sum_probs=159.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cc--cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NE--RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++|||||.|.||.++++.+.++..  +|+.+| -.  ...+.+ ..+..    ..+..+++.|+.|.+  .+.+++++-
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l-~~~~~----~~~~~fv~~DI~D~~--~v~~~~~~~   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL-ADVED----SPRYRFVQGDICDRE--LVDRLFKEY   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH-Hhhhc----CCCceEEeccccCHH--HHHHHHHhc
Confidence            4689999999999999999998865  466665 11  222222 22222    258999999999988  888888753


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccc---------
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGA---------  151 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~---------  151 (266)
                           .+|+++|-|.-++.     +-+..+-+..+++|+.|++.+++++..+..+    -+++.||+-.-.         
T Consensus        74 -----~~D~VvhfAAESHV-----DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~----frf~HISTDEVYG~l~~~~~~  139 (340)
T COG1088          74 -----QPDAVVHFAAESHV-----DRSIDGPAPFIQTNVVGTYTLLEAARKYWGK----FRFHHISTDEVYGDLGLDDDA  139 (340)
T ss_pred             -----CCCeEEEechhccc-----cccccChhhhhhcchHHHHHHHHHHHHhccc----ceEEEeccccccccccCCCCC
Confidence                 69999999986443     3444556788999999999999999887542    488888863211         


Q ss_pred             --ccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCC---------
Q 024517          152 --ERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH---------  220 (266)
Q Consensus       152 --~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------  220 (266)
                        ...++.+.++|++||++...|+|+..+.|   |+.+....+..-..|...+.-.-+....+.....|++         
T Consensus       140 FtE~tp~~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iR  216 (340)
T COG1088         140 FTETTPYNPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIR  216 (340)
T ss_pred             cccCCCCCCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCccee
Confidence              11235678999999999999999999984   6788877877777775533211122222222222222         


Q ss_pred             CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCCc
Q 024517          221 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       221 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      .|.-.+ |=++++..++...   -.|+++++.||.-+++-++
T Consensus       217 DWl~Ve-Dh~~ai~~Vl~kg---~~GE~YNIgg~~E~~Nlev  254 (340)
T COG1088         217 DWLYVE-DHCRAIDLVLTKG---KIGETYNIGGGNERTNLEV  254 (340)
T ss_pred             eeEEeH-hHHHHHHHHHhcC---cCCceEEeCCCccchHHHH
Confidence            233344 8899998888653   2399999999987765443

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.71  E-value=9.4e-16  Score=127.24  Aligned_cols=203  Identities=15%  Similarity=0.100  Sum_probs=125.8

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .+++++|||||+|+||++++++|+++|++|+++. +.++..+.   +. .   ..++.++.+|+++..+ ++.+.+   .
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~-~---~~~~~~~~~Dl~d~~~-~l~~~~---~   83 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTS---LP-Q---DPSLQIVRADVTEGSD-KLVEAI---G   83 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHh---cc-c---CCceEEEEeeCCCCHH-HHHHHh---h
Confidence            4678999999999999999999999999998877 33322211   11 1   2368899999998420 222221   0


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-CCCCch
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-LYPGAA  160 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-~~~~~~  160 (266)
                         .++|++|+++|......+.         ..+++|..++..+++++.    +.+ .++||++||....... ..+...
T Consensus        84 ---~~~d~vi~~~g~~~~~~~~---------~~~~~n~~~~~~ll~a~~----~~~-~~~iV~iSS~~v~g~~~~~~~~~  146 (251)
T PLN00141         84 ---DDSDAVICATGFRRSFDPF---------APWKVDNFGTVNLVEACR----KAG-VTRFILVSSILVNGAAMGQILNP  146 (251)
T ss_pred             ---cCCCEEEECCCCCcCCCCC---------CceeeehHHHHHHHHHHH----HcC-CCEEEEEccccccCCCcccccCc
Confidence               3699999998863211111         124678888888888763    333 4799999998532211 123345


Q ss_pred             hhHHhHHHHHHHHHHHHHH--hCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          161 AYGACAASIHQLVRTAAME--IGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e--~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      .|...|.....+...+..|  +...|++++.|.||++.++.........      ....+...+.+++ |+|+.+..++.
T Consensus       147 ~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~------~~~~~~~~~i~~~-dvA~~~~~~~~  219 (251)
T PLN00141        147 AYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVME------PEDTLYEGSISRD-QVAEVAVEALL  219 (251)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEEC------CCCccccCcccHH-HHHHHHHHHhc
Confidence            5666665444333222222  4567899999999999876432211000      0001112235555 99999999986


Q ss_pred             CC
Q 024517          239 DG  240 (266)
Q Consensus       239 ~~  240 (266)
                      ..
T Consensus       220 ~~  221 (251)
T PLN00141        220 CP  221 (251)
T ss_pred             Ch
Confidence            53

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.70  E-value=9.5e-16  Score=131.62  Aligned_cols=233  Identities=14%  Similarity=0.105  Sum_probs=151.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      ++|||||+|+||++++++|.++|++|+++++. ....+....+...    .++.++.+|+++.+  ++.++++.     +
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~--~~~~~~~~-----~   69 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI----TRVTFVEGDLRDRE--LLDRLFEE-----H   69 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc----cceEEEECCCCCHH--HHHHHHHh-----C
Confidence            47999999999999999999999999888732 2222222222111    25778899999988  88877763     4


Q ss_pred             CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---------CC
Q 024517           86 NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---------LY  156 (266)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~~  156 (266)
                      ++|++||+||.... .    ...++....++.|+.++..+++++.+    .+ .+++|++||.......         +.
T Consensus        70 ~~d~vv~~ag~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~ss~~~~g~~~~~~~~e~~~~  139 (328)
T TIGR01179        70 KIDAVIHFAGLIAV-G----ESVQDPLKYYRNNVVNTLNLLEAMQQ----TG-VKKFIFSSSAAVYGEPSSIPISEDSPL  139 (328)
T ss_pred             CCcEEEECccccCc-c----hhhcCchhhhhhhHHHHHHHHHHHHh----cC-CCEEEEecchhhcCCCCCCCccccCCC
Confidence            79999999987422 1    12234456788999999999887543    22 3689998886432110         01


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-----cHHHH----HHHh-hc---------c
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-----QERAV----KLVR-EA---------A  217 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-----~~~~~----~~~~-~~---------~  217 (266)
                      .+...|+.+|++.+.+++.++++.  .++++..+.|+.+..+.......     .....    .... ..         .
T Consensus       140 ~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (328)
T TIGR01179       140 GPINPYGRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDY  217 (328)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcc
Confidence            234689999999999999987652  46899999998888764221110     01111    1111 00         0


Q ss_pred             CCC------CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCCcc
Q 024517          218 PLH------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRMR  263 (266)
Q Consensus       218 ~~~------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~  263 (266)
                      |..      .+...+ |+++++..++........|+.+++.++..++..++.
T Consensus       218 ~~~~g~~~~~~v~~~-D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~  268 (328)
T TIGR01179       218 PTPDGTCVRDYIHVM-DLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVI  268 (328)
T ss_pred             cCCCCceEEeeeeHH-HHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHH
Confidence            110      123344 999999988854323345788888777666655443

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.69  E-value=1.8e-15  Score=130.12  Aligned_cols=217  Identities=16%  Similarity=0.145  Sum_probs=146.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      ++++||||+|+||++++++|+++|++|++++ +.+....    +.     ...+.++.+|+++.+  ++.++++      
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~-----~~~~~~~~~D~~~~~--~l~~~~~------   63 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----LE-----GLDVEIVEGDLRDPA--SLRKAVA------   63 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----cc-----cCCceEEEeeCCCHH--HHHHHHh------
Confidence            3699999999999999999999999999998 4333211    11     136788999999987  7777664      


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC--------
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY--------  156 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~--------  156 (266)
                       .+|++||+++....       ..++.+..+++|+.++..+++++.+.    + .+++|++||.........        
T Consensus        64 -~~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~e~~  130 (328)
T TIGR03466        64 -GCRALFHVAADYRL-------WAPDPEEMYAANVEGTRNLLRAALEA----G-VERVVYTSSVATLGVRGDGTPADETT  130 (328)
T ss_pred             -CCCEEEEeceeccc-------CCCCHHHHHHHHHHHHHHHHHHHHHh----C-CCeEEEEechhhcCcCCCCCCcCccC
Confidence             58999999975211       11235678889999999998887543    2 369999999755331100        


Q ss_pred             C-----CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHH-HHHHhhccCCC-----CCCCC
Q 024517          157 P-----GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERA-VKLVREAAPLH-----RWLDV  225 (266)
Q Consensus       157 ~-----~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~  225 (266)
                      +     ....|+.+|.+.+.+++.++.+   .++++..+.|+.+.++........... ........|..     .+...
T Consensus       131 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  207 (328)
T TIGR03466       131 PSSLDDMIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHV  207 (328)
T ss_pred             CCCcccccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEH
Confidence            0     1347999999999999988765   478999999999987653221111111 11111111211     12334


Q ss_pred             hhhHHHHHHHHccCCCCcccccEEEEcCCccccCC
Q 024517          226 KNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       226 ~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                      + |+++++..++...   ..|+.+.++ |..++..
T Consensus       208 ~-D~a~a~~~~~~~~---~~~~~~~~~-~~~~s~~  237 (328)
T TIGR03466       208 D-DVAEGHLLALERG---RIGERYILG-GENLTLK  237 (328)
T ss_pred             H-HHHHHHHHHHhCC---CCCceEEec-CCCcCHH
Confidence            4 9999998888552   367888884 5444433

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.68  E-value=7.3e-15  Score=120.38  Aligned_cols=214  Identities=18%  Similarity=0.247  Sum_probs=149.2

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCCC
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNL   87 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~i   87 (266)
                      ||||||+|.||.+++++|.++|+.|+.+.+...........       .++.++.+|+.+.+  +++++++..     ++
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~~~~~dl~~~~--~~~~~~~~~-----~~   66 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK-------LNVEFVIGDLTDKE--QLEKLLEKA-----NI   66 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH-------TTEEEEESETTSHH--HHHHHHHHH-----TE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc-------ceEEEEEeeccccc--ccccccccc-----Cc
Confidence            79999999999999999999999988777433333222221       27889999999988  888888775     79


Q ss_pred             CEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-C--------CCC
Q 024517           88 DAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-L--------YPG  158 (266)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-~--------~~~  158 (266)
                      |.+||+|+...     .....++....++.|+.++..+++.+...    + ..+++++||....... .        ...
T Consensus        67 d~vi~~a~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~~i~~sS~~~y~~~~~~~~~e~~~~~~  136 (236)
T PF01370_consen   67 DVVIHLAAFSS-----NPESFEDPEEIIEANVQGTRNLLEAAREA----G-VKRFIFLSSASVYGDPDGEPIDEDSPINP  136 (236)
T ss_dssp             SEEEEEBSSSS-----HHHHHHSHHHHHHHHHHHHHHHHHHHHHH----T-TSEEEEEEEGGGGTSSSSSSBETTSGCCH
T ss_pred             eEEEEeecccc-----ccccccccccccccccccccccccccccc----c-ccccccccccccccccccccccccccccc
Confidence            99999998731     11222456778888888888888777543    2 3599999996433221 0        113


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCC---cccccccHHHHHHHhhccCCCC---------CCCCh
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDE---YPIAVGQERAVKLVREAAPLHR---------WLDVK  226 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~---~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  226 (266)
                      ...|+.+|...+.+++.+.+..   ++++..+.|+.+..|.   .....--..+........|...         +... 
T Consensus       137 ~~~Y~~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v-  212 (236)
T PF01370_consen  137 LSPYGASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHV-  212 (236)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEH-
T ss_pred             cccccccccccccccccccccc---ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEH-
Confidence            4569999999999999998874   7999999999999988   1111001223333332222111         1223 


Q ss_pred             hhHHHHHHHHccCCCCcccccEEEE
Q 024517          227 NDLASTVIYLISDGSRYMTGTTIYV  251 (266)
Q Consensus       227 ~dva~~~~~l~s~~~~~~~G~~i~~  251 (266)
                      +|++++++.++....  ..|+.+++
T Consensus       213 ~D~a~~~~~~~~~~~--~~~~~yNi  235 (236)
T PF01370_consen  213 DDLAEAIVAALENPK--AAGGIYNI  235 (236)
T ss_dssp             HHHHHHHHHHHHHSC--TTTEEEEE
T ss_pred             HHHHHHHHHHHhCCC--CCCCEEEe
Confidence            599999999997653  67888776

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02427 UDP-apiose/xylose synthase

Probab=99.66  E-value=5.5e-15  Score=130.20  Aligned_cols=228  Identities=11%  Similarity=0.151  Sum_probs=143.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHc-CCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKR-GCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~-g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +.++||||||+|.||++++++|+++ |++|++++ +.+.............  ..++.++.+|++|.+  .+.++++   
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~--~~~~~~~~~Dl~d~~--~l~~~~~---   85 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPW--SGRIQFHRINIKHDS--RLEGLIK---   85 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccC--CCCeEEEEcCCCChH--HHHHHhh---
Confidence            4567999999999999999999998 58999888 4332221111000000  136889999999988  7766664   


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-------
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-------  154 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-------  154 (266)
                          .+|+|||+|+...+ ....    .+-...+..|+.++..+++++...      +.++|++||.......       
T Consensus        86 ----~~d~ViHlAa~~~~-~~~~----~~~~~~~~~n~~gt~~ll~aa~~~------~~r~v~~SS~~vYg~~~~~~~~e  150 (386)
T PLN02427         86 ----MADLTINLAAICTP-ADYN----TRPLDTIYSNFIDALPVVKYCSEN------NKRLIHFSTCEVYGKTIGSFLPK  150 (386)
T ss_pred             ----cCCEEEEcccccCh-hhhh----hChHHHHHHHHHHHHHHHHHHHhc------CCEEEEEeeeeeeCCCcCCCCCc
Confidence                47999999986322 1111    112234567999999888876432      2589999996432110       


Q ss_pred             CCC------------------------CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc---c--
Q 024517          155 LYP------------------------GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV---G--  205 (266)
Q Consensus       155 ~~~------------------------~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~---~--  205 (266)
                      ..+                        ....|+.+|.+.+.+++.+++.   .++++..+.|+.+..|......   .  
T Consensus       151 ~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~  227 (386)
T PLN02427        151 DHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPS  227 (386)
T ss_pred             ccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCccccccccc
Confidence            000                        1236999999999999877654   4799999999999987532100   0  


Q ss_pred             ---c---HHHHHHHhhccCCC---------CCCCChhhHHHHHHHHccCCCCcccccEEEEcCC-cccc
Q 024517          206 ---Q---ERAVKLVREAAPLH---------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA-QSIT  258 (266)
Q Consensus       206 ---~---~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG-~~~~  258 (266)
                         .   ..+........|..         .+...+ |++++++.++... ....|+.+++.+| ..++
T Consensus       228 ~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~-Dva~ai~~al~~~-~~~~g~~yni~~~~~~~s  294 (386)
T PLN02427        228 EGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIK-DAIEAVLLMIENP-ARANGHIFNVGNPNNEVT  294 (386)
T ss_pred             cccchHHHHHHHHHhcCCCeEEECCCCceECcEeHH-HHHHHHHHHHhCc-ccccCceEEeCCCCCCcc
Confidence               0   01112222222211         134445 9999999888642 1245788888765 3444

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.66  E-value=7.4e-15  Score=123.50  Aligned_cols=223  Identities=14%  Similarity=0.156  Sum_probs=148.5

Q ss_pred             EEecCCCchHHHHHHHHHHcC--CeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            9 LLTSDGDEISKNIAFHLAKRG--CRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         9 lItGa~~giG~~ia~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      |||||+|.||++++++|+++|  ++|.++++........ .+..    .....++.+|++|.+  ++.++++       +
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~-~~~~----~~~~~~~~~Di~d~~--~l~~a~~-------g   66 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLK-DLQK----SGVKEYIQGDITDPE--SLEEALE-------G   66 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccch-hhhc----ccceeEEEeccccHH--HHHHHhc-------C
Confidence            699999999999999999999  6888888333322211 1111    123349999999998  8888775       5


Q ss_pred             CCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc---C-C-------
Q 024517           87 LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER---G-L-------  155 (266)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~---~-~-------  155 (266)
                      .|++||+|+......      ....+.++++|+.|+-++++++...    + -.++|++||......   . +       
T Consensus        67 ~d~V~H~Aa~~~~~~------~~~~~~~~~vNV~GT~nvl~aa~~~----~-VkrlVytSS~~vv~~~~~~~~~~~~dE~  135 (280)
T PF01073_consen   67 VDVVFHTAAPVPPWG------DYPPEEYYKVNVDGTRNVLEAARKA----G-VKRLVYTSSISVVFDNYKGDPIINGDED  135 (280)
T ss_pred             CceEEEeCccccccC------cccHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEcCcceeEeccCCCCcccCCcC
Confidence            899999998632211      3456889999999999999988753    2 369999999877543   1 0       


Q ss_pred             ----CCCchhhHHhHHHHHHHHHHHHH-HhCC-CCcEEEEEecCcccCCCcccccccH-HHHHHHhhccCCC--C----C
Q 024517          156 ----YPGAAAYGACAASIHQLVRTAAM-EIGK-HKIRVNGIARGLHLQDEYPIAVGQE-RAVKLVREAAPLH--R----W  222 (266)
Q Consensus       156 ----~~~~~~y~~sK~a~~~~~~~la~-e~~~-~~i~v~~v~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~--~----~  222 (266)
                          ......|+.||+..+.+++.... ++.. .+++..+|.|..|..|........- +...........+  .    +
T Consensus       136 ~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~  215 (280)
T PF01073_consen  136 TPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDF  215 (280)
T ss_pred             CcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECc
Confidence                01445899999999999988765 2221 2589999999999988654432211 1111110011111  1    2


Q ss_pred             CCChhhHHHHHHHHcc---CC--CCcccccEEEEcCCccc
Q 024517          223 LDVKNDLASTVIYLIS---DG--SRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       223 ~~~~~dva~~~~~l~s---~~--~~~~~G~~i~~dgG~~~  257 (266)
                      ...+ ++|.+.+....   +.  ...+.||.+.+..|...
T Consensus       216 vyV~-NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~  254 (280)
T PF01073_consen  216 VYVE-NVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPV  254 (280)
T ss_pred             EeHH-HHHHHHHHHHHHhccccccccCCCcEEEEECCCcc
Confidence            2244 88887755432   22  46789999988766443

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.64  E-value=9.3e-15  Score=126.94  Aligned_cols=223  Identities=9%  Similarity=0.111  Sum_probs=142.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHc-CCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecC-CCchHHHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKR-GCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDME-EDREGAFDEAVDKACQI   83 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~v~~~~~~~~~~   83 (266)
                      +++|||||+|.||++++++|+++ |++|+.+++...  .. ..+.   + ...+.++.+|++ +.+  .+.+++      
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~--~~-~~~~---~-~~~~~~~~~Dl~~~~~--~~~~~~------   66 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTD--RL-GDLV---N-HPRMHFFEGDITINKE--WIEYHV------   66 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHH--HH-HHhc---c-CCCeEEEeCCCCCCHH--HHHHHH------
Confidence            46999999999999999999986 699999884221  11 1121   1 136888999998 444  443333      


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC-------C
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL-------Y  156 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~-------~  156 (266)
                       .++|+|||+|+...+..     ..++.+..+++|+.++.++++++..    .  +.++|++||........       .
T Consensus        67 -~~~d~ViH~aa~~~~~~-----~~~~p~~~~~~n~~~~~~ll~aa~~----~--~~~~v~~SS~~vyg~~~~~~~~ee~  134 (347)
T PRK11908         67 -KKCDVILPLVAIATPAT-----YVKQPLRVFELDFEANLPIVRSAVK----Y--GKHLVFPSTSEVYGMCPDEEFDPEA  134 (347)
T ss_pred             -cCCCEEEECcccCChHH-----hhcCcHHHHHHHHHHHHHHHHHHHh----c--CCeEEEEecceeeccCCCcCcCccc
Confidence             35899999998632211     1223456789999999988887753    2  25899999974321100       0


Q ss_pred             ---------CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc----cc----HHHHHHHhhccC-
Q 024517          157 ---------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV----GQ----ERAVKLVREAAP-  218 (266)
Q Consensus       157 ---------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~----~~----~~~~~~~~~~~~-  218 (266)
                               .+...|+.+|.+.+.+++.++..   .++++..+.|+.+..|......    ..    ...........| 
T Consensus       135 ~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  211 (347)
T PRK11908        135 SPLVYGPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPI  211 (347)
T ss_pred             cccccCcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCce
Confidence                     11236999999999999988765   4678888888888776532110    00    111111111111 


Q ss_pred             --------CCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCC-ccccC
Q 024517          219 --------LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA-QSITR  259 (266)
Q Consensus       219 --------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG-~~~~~  259 (266)
                              ...+...+ |++++++.++........|+.+++.++ ..++.
T Consensus       212 ~~~~~g~~~r~~i~v~-D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~  260 (347)
T PRK11908        212 SLVDGGSQKRAFTDID-DGIDALMKIIENKDGVASGKIYNIGNPKNNHSV  260 (347)
T ss_pred             EEecCCceeeccccHH-HHHHHHHHHHhCccccCCCCeEEeCCCCCCcCH
Confidence                    11245555 999999998865322356888999764 34443

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.64  E-value=2e-14  Score=135.05  Aligned_cols=232  Identities=14%  Similarity=0.100  Sum_probs=149.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHc--CCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKR--GCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++|+||||||+|.||++++++|+++  +++|+.+++........ .+... ....++.++.+|+++.+  .+.+++..  
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~-~l~~~-~~~~~v~~~~~Dl~d~~--~~~~~~~~--   78 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLK-NLNPS-KSSPNFKFVKGDIASAD--LVNYLLIT--   78 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhh-hhhhc-ccCCCeEEEECCCCChH--HHHHHHhh--
Confidence            5789999999999999999999998  67888887432212111 11111 01247889999999987  66655432  


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-------
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-------  154 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-------  154 (266)
                         .++|+|||+|+.....     ....+....+++|+.++..+++++...    +.-.++|++||.......       
T Consensus        79 ---~~~D~ViHlAa~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~vkr~I~~SS~~vyg~~~~~~~~~  146 (668)
T PLN02260         79 ---EGIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDADVG  146 (668)
T ss_pred             ---cCCCEEEECCCccCch-----hhhhCHHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEcchHHhCCCccccccC
Confidence               3799999999873221     112233567789999999998887432    113589999996432110       


Q ss_pred             -----CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCC---------
Q 024517          155 -----LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH---------  220 (266)
Q Consensus       155 -----~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------  220 (266)
                           +..+...|+.+|.+.+.+++.+..+   .++++..+.|+.|..|.......-..+........+..         
T Consensus       147 ~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~---~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r  223 (668)
T PLN02260        147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVR  223 (668)
T ss_pred             ccccCCCCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceE
Confidence                 0113457999999999999988776   46889999999998875421100111212211111111         


Q ss_pred             CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCC
Q 024517          221 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       221 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                      .+... +|+++++..++...   ..|+.+++.++..++..
T Consensus       224 ~~ihV-~Dva~a~~~~l~~~---~~~~vyni~~~~~~s~~  259 (668)
T PLN02260        224 SYLYC-EDVAEAFEVVLHKG---EVGHVYNIGTKKERRVI  259 (668)
T ss_pred             eeEEH-HHHHHHHHHHHhcC---CCCCEEEECCCCeeEHH
Confidence            12334 49999998887542   34678888777655443

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.64  E-value=2.1e-14  Score=117.48  Aligned_cols=150  Identities=18%  Similarity=0.166  Sum_probs=114.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      .++|||||+|-||+++|.+|++.|+.|+++|+ .....+.....        ...++..|+.|..  .+++++++     
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~--------~~~f~~gDi~D~~--~L~~vf~~-----   65 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL--------QFKFYEGDLLDRA--LLTAVFEE-----   65 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc--------cCceEEeccccHH--HHHHHHHh-----
Confidence            36999999999999999999999999999993 33333333221        1579999999988  77777766     


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC---------
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL---------  155 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~---------  155 (266)
                      .+||.+||.|+.....     .+.++-.+.++.|+.++..|+++....-     -.++|| ||.++.++.+         
T Consensus        66 ~~idaViHFAa~~~Vg-----ESv~~Pl~Yy~NNv~gTl~Ll~am~~~g-----v~~~vF-SStAavYG~p~~~PI~E~~  134 (329)
T COG1087          66 NKIDAVVHFAASISVG-----ESVQNPLKYYDNNVVGTLNLIEAMLQTG-----VKKFIF-SSTAAVYGEPTTSPISETS  134 (329)
T ss_pred             cCCCEEEECccccccc-----hhhhCHHHHHhhchHhHHHHHHHHHHhC-----CCEEEE-ecchhhcCCCCCcccCCCC
Confidence            3899999999875432     4556678899999999999988875542     135554 5555665532         


Q ss_pred             -CCCchhhHHhHHHHHHHHHHHHHHhC
Q 024517          156 -YPGAAAYGACAASIHQLVRTAAMEIG  181 (266)
Q Consensus       156 -~~~~~~y~~sK~a~~~~~~~la~e~~  181 (266)
                       ..+..+|+.||.+.+.+.+.+++.+.
T Consensus       135 ~~~p~NPYG~sKlm~E~iL~d~~~a~~  161 (329)
T COG1087         135 PLAPINPYGRSKLMSEEILRDAAKANP  161 (329)
T ss_pred             CCCCCCcchhHHHHHHHHHHHHHHhCC
Confidence             23567999999999999999988754

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.63  E-value=1.7e-14  Score=135.05  Aligned_cols=221  Identities=10%  Similarity=0.133  Sum_probs=145.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHc-CCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHH-HHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKR-GCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGA-FDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-v~~~~~~~~   81 (266)
                      ++++||||||+|.||++++++|+++ |++|+.+++....  .. ...   . ..++.++.+|+++..  + +++++    
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~--~~-~~~---~-~~~~~~~~gDl~d~~--~~l~~~l----  380 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDA--IS-RFL---G-HPRFHFVEGDISIHS--EWIEYHI----  380 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchh--hh-hhc---C-CCceEEEeccccCcH--HHHHHHh----
Confidence            5788999999999999999999986 7999999843321  11 111   1 136888899999866  4 33333    


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---C---
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---L---  155 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---~---  155 (266)
                         .++|++||+|+...+..     ..++.+..+++|+.++..+++++...      +.++|++||.......   +   
T Consensus       381 ---~~~D~ViHlAa~~~~~~-----~~~~~~~~~~~Nv~~t~~ll~a~~~~------~~~~V~~SS~~vyg~~~~~~~~E  446 (660)
T PRK08125        381 ---KKCDVVLPLVAIATPIE-----YTRNPLRVFELDFEENLKIIRYCVKY------NKRIIFPSTSEVYGMCTDKYFDE  446 (660)
T ss_pred             ---cCCCEEEECccccCchh-----hccCHHHHHHhhHHHHHHHHHHHHhc------CCeEEEEcchhhcCCCCCCCcCc
Confidence               36899999998643211     11223457889999999999888653      2489999996432110   0   


Q ss_pred             -C------C---CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc----c----cHHHHHHHhhcc
Q 024517          156 -Y------P---GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV----G----QERAVKLVREAA  217 (266)
Q Consensus       156 -~------~---~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~----~----~~~~~~~~~~~~  217 (266)
                       .      +   ....|+.+|.+.+.+++.+++.   .++++..+.|+.+..|......    .    -..+........
T Consensus       447 ~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~  523 (660)
T PRK08125        447 DTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEK---EGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGS  523 (660)
T ss_pred             cccccccCCCCCCccchHHHHHHHHHHHHHHHHh---cCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCC
Confidence             0      1   1236999999999999988766   4689999999999887532110    0    011112221111


Q ss_pred             CC---------CCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCc
Q 024517          218 PL---------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ  255 (266)
Q Consensus       218 ~~---------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~  255 (266)
                      +.         ..+...+ |++++++.++........|+.+++.+|.
T Consensus       524 ~i~~~g~g~~~rd~i~v~-Dva~a~~~~l~~~~~~~~g~iyni~~~~  569 (660)
T PRK08125        524 PIKLVDGGKQKRCFTDIR-DGIEALFRIIENKDNRCDGQIINIGNPD  569 (660)
T ss_pred             CeEEeCCCceeeceeeHH-HHHHHHHHHHhccccccCCeEEEcCCCC
Confidence            11         1133445 9999998888653333568889887763

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.60  E-value=7.8e-14  Score=124.42  Aligned_cols=223  Identities=15%  Similarity=0.115  Sum_probs=141.8

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      -++++||||||+|.||++++++|+++|++|+++++. ....+   .+..... ..++.++..|+.+..       +    
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~---~~~~~~~-~~~~~~i~~D~~~~~-------l----  181 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKE---NVMHHFS-NPNFELIRHDVVEPI-------L----  181 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchh---hhhhhcc-CCceEEEECCccChh-------h----
Confidence            367899999999999999999999999999988732 22111   1111111 135677777876532       1    


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-------
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-------  154 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-------  154 (266)
                         ..+|+|||+|+...+..     ...+....+++|+.++.++++++...      +.++|++||.......       
T Consensus       182 ---~~~D~ViHlAa~~~~~~-----~~~~p~~~~~~Nv~gt~nLleaa~~~------g~r~V~~SS~~VYg~~~~~p~~E  247 (442)
T PLN02206        182 ---LEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRV------GARFLLTSTSEVYGDPLQHPQVE  247 (442)
T ss_pred             ---cCCCEEEEeeeecchhh-----hhcCHHHHHHHHHHHHHHHHHHHHHh------CCEEEEECChHHhCCCCCCCCCc
Confidence               25899999997632211     11234678899999999999888542      2489999997543110       


Q ss_pred             -------CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--cHHHHHHHhhccCCC-----
Q 024517          155 -------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKLVREAAPLH-----  220 (266)
Q Consensus       155 -------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~-----  220 (266)
                             +......|+.+|.+.+.+++.+.+.   .++++..+.|+.+..|.......  -..+........+..     
T Consensus       248 ~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G  324 (442)
T PLN02206        248 TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDG  324 (442)
T ss_pred             cccccCCCCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCC
Confidence                   0112457999999999999887665   46888888888887765321100  011222222111211     


Q ss_pred             ----CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCCc
Q 024517          221 ----RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       221 ----~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                          .+... +|+++++..++...   . +..+++.+|..++..++
T Consensus       325 ~~~rdfi~V-~Dva~ai~~a~e~~---~-~g~yNIgs~~~~sl~El  365 (442)
T PLN02206        325 KQTRSFQFV-SDLVEGLMRLMEGE---H-VGPFNLGNPGEFTMLEL  365 (442)
T ss_pred             CEEEeEEeH-HHHHHHHHHHHhcC---C-CceEEEcCCCceeHHHH
Confidence                12334 49999998887532   2 34788877766654443

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.60  E-value=3.6e-14  Score=121.38  Aligned_cols=221  Identities=14%  Similarity=0.171  Sum_probs=138.5

Q ss_pred             EEEecCCCchHHHHHHHHHHcCC-eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGC-RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      +|||||+|.||+++++.|.++|+ .|+++++........ ++        ....+..|+++.+  .++.+.+.   .+.+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~-~~--------~~~~~~~d~~~~~--~~~~~~~~---~~~~   66 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHKFL-NL--------ADLVIADYIDKED--FLDRLEKG---AFGK   66 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchhhh-hh--------hheeeeccCcchh--HHHHHHhh---ccCC
Confidence            68999999999999999999998 688777433322111 11        1134556777766  55444432   3468


Q ss_pred             CCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---------CCC
Q 024517           87 LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---------LYP  157 (266)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~~~  157 (266)
                      +|++||+|+.. .      ...++.+..+++|+.++..+++++...      +.++|++||.......         ...
T Consensus        67 ~D~vvh~A~~~-~------~~~~~~~~~~~~n~~~~~~ll~~~~~~------~~~~v~~SS~~vy~~~~~~~~e~~~~~~  133 (314)
T TIGR02197        67 IEAIFHQGACS-D------TTETDGEYMMENNYQYSKRLLDWCAEK------GIPFIYASSAATYGDGEAGFREGRELER  133 (314)
T ss_pred             CCEEEECcccc-C------ccccchHHHHHHHHHHHHHHHHHHHHh------CCcEEEEccHHhcCCCCCCcccccCcCC
Confidence            99999999862 1      122355778899999999999887542      2479999996432110         012


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--c--HHHHHHHhhccCC--------------
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--Q--ERAVKLVREAAPL--------------  219 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~--~~~~~~~~~~~~~--------------  219 (266)
                      +...|+.+|.+.+.+++...... ..++++..+.|+.+..|.......  .  ..+........+.              
T Consensus       134 p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  212 (314)
T TIGR02197       134 PLNVYGYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQ  212 (314)
T ss_pred             CCCHHHHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCc
Confidence            45689999999999998643321 225788888888888765321100  0  1111111111110              


Q ss_pred             -CCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          220 -HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       220 -~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                       ..+... +|+++++..++..    ..+..+++.++..++..+
T Consensus       213 ~~~~i~v-~D~a~~i~~~~~~----~~~~~yni~~~~~~s~~e  250 (314)
T TIGR02197       213 LRDFVYV-KDVVDVNLWLLEN----GVSGIFNLGTGRARSFND  250 (314)
T ss_pred             eeeeEEH-HHHHHHHHHHHhc----ccCceEEcCCCCCccHHH
Confidence             112333 4999999999865    245688887776655443

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.60  E-value=3.9e-14  Score=121.01  Aligned_cols=217  Identities=14%  Similarity=0.131  Sum_probs=135.5

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEE-ecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH--Hh
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGCRLVLV-GNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ--IL   84 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~--~~   84 (266)
                      +|||||+|.||++++++|+++|++++++ ++........             .+..+|+.|..  +...+++.+..  .+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~-------------~~~~~~~~d~~--~~~~~~~~~~~~~~~   66 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV-------------NLVDLDIADYM--DKEDFLAQIMAGDDF   66 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHH-------------hhhhhhhhhhh--hHHHHHHHHhccccc
Confidence            7999999999999999999999966654 4433221110             12235666655  55555554432  24


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---------C
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---------L  155 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~  155 (266)
                      +++|+|||+|+.... .   ...   -+..++.|+.++..+++++..    .+  .++|++||.......         +
T Consensus        67 ~~~d~Vih~A~~~~~-~---~~~---~~~~~~~n~~~t~~ll~~~~~----~~--~~~i~~SS~~vyg~~~~~~~~E~~~  133 (308)
T PRK11150         67 GDIEAIFHEGACSST-T---EWD---GKYMMDNNYQYSKELLHYCLE----RE--IPFLYASSAATYGGRTDDFIEEREY  133 (308)
T ss_pred             CCccEEEECceecCC-c---CCC---hHHHHHHHHHHHHHHHHHHHH----cC--CcEEEEcchHHhCcCCCCCCccCCC
Confidence            579999999985322 1   111   235689999999999888753    22  479999997432211         0


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-c---HHHHHHHhh-ccC---CC------C
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-Q---ERAVKLVRE-AAP---LH------R  221 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-~---~~~~~~~~~-~~~---~~------~  221 (266)
                      ..+...|+.+|.+.+.+++.+..+   .++++..+.|+.+..|....... .   ..+...... ..+   .+      .
T Consensus       134 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~  210 (308)
T PRK11150        134 EKPLNVYGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRD  210 (308)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeee
Confidence            123467999999999999887665   47899999999988875422110 0   011111211 111   01      1


Q ss_pred             CCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCC
Q 024517          222 WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       222 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                      +...+ |++++++.++...    .+..+++.+|..++-.
T Consensus       211 ~i~v~-D~a~a~~~~~~~~----~~~~yni~~~~~~s~~  244 (308)
T PRK11150        211 FVYVG-DVAAVNLWFWENG----VSGIFNCGTGRAESFQ  244 (308)
T ss_pred             eeeHH-HHHHHHHHHHhcC----CCCeEEcCCCCceeHH
Confidence            23344 9999988887542    2458888777655543

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.59  E-value=6.7e-14  Score=122.53  Aligned_cols=224  Identities=12%  Similarity=0.039  Sum_probs=143.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +++++|||||+|.||++++++|.++|++|+++++....  .   +...   .....++.+|+++.+  .+.++++     
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~--~---~~~~---~~~~~~~~~Dl~d~~--~~~~~~~-----   84 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNE--H---MSED---MFCHEFHLVDLRVME--NCLKVTK-----   84 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccc--c---cccc---cccceEEECCCCCHH--HHHHHHh-----
Confidence            57899999999999999999999999999999843211  0   1000   012467788999876  6555542     


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---------
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---------  154 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------  154 (266)
                        ++|+|||+|+...... ...   .+....+..|+.++.++++++...    + -.++|++||.......         
T Consensus        85 --~~D~Vih~Aa~~~~~~-~~~---~~~~~~~~~N~~~t~nll~aa~~~----~-vk~~V~~SS~~vYg~~~~~~~~~~~  153 (370)
T PLN02695         85 --GVDHVFNLAADMGGMG-FIQ---SNHSVIMYNNTMISFNMLEAARIN----G-VKRFFYASSACIYPEFKQLETNVSL  153 (370)
T ss_pred             --CCCEEEEcccccCCcc-ccc---cCchhhHHHHHHHHHHHHHHHHHh----C-CCEEEEeCchhhcCCccccCcCCCc
Confidence              5899999997532211 111   122345677899999888877432    2 3589999986422100         


Q ss_pred             ------CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc----ccHHHHHHHhh-ccCCC---
Q 024517          155 ------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV----GQERAVKLVRE-AAPLH---  220 (266)
Q Consensus       155 ------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~----~~~~~~~~~~~-~~~~~---  220 (266)
                            +..+...|+.+|.+.+.+++..+..   .++++..+.|+.+..|......    ....+...... ..+..   
T Consensus       154 ~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g  230 (370)
T PLN02695        154 KESDAWPAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWG  230 (370)
T ss_pred             CcccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeC
Confidence                  1234568999999999999887665   4799999999999987532110    01222222211 11111   


Q ss_pred             ------CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          221 ------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       221 ------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                            .+...+ |+++++.+++...    .++.+++.+|..++-.+
T Consensus       231 ~g~~~r~~i~v~-D~a~ai~~~~~~~----~~~~~nv~~~~~~s~~e  272 (370)
T PLN02695        231 DGKQTRSFTFID-ECVEGVLRLTKSD----FREPVNIGSDEMVSMNE  272 (370)
T ss_pred             CCCeEEeEEeHH-HHHHHHHHHHhcc----CCCceEecCCCceeHHH
Confidence                  123344 9999999887542    25678887776655433

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.58  E-value=3.4e-14  Score=125.03  Aligned_cols=215  Identities=17%  Similarity=0.162  Sum_probs=137.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHH--HHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSS--VAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++++|||||+|+||++++++|+++|++|++++| ......  ..+.+...   ..++.++.+|++|.+  ++.++++..
T Consensus        59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~---~~~v~~v~~Dl~d~~--~l~~~~~~~  133 (390)
T PLN02657         59 KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE---LPGAEVVFGDVTDAD--SLRKVLFSE  133 (390)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh---cCCceEEEeeCCCHH--HHHHHHHHh
Confidence            5779999999999999999999999999999884 332211  11111111   146889999999998  888887643


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                         ..++|+||||++.. . ...        ...+++|+.++..+++++.    +.+ -+++|++||....     .+..
T Consensus       134 ---~~~~D~Vi~~aa~~-~-~~~--------~~~~~vn~~~~~~ll~aa~----~~g-v~r~V~iSS~~v~-----~p~~  190 (390)
T PLN02657        134 ---GDPVDVVVSCLASR-T-GGV--------KDSWKIDYQATKNSLDAGR----EVG-AKHFVLLSAICVQ-----KPLL  190 (390)
T ss_pred             ---CCCCcEEEECCccC-C-CCC--------ccchhhHHHHHHHHHHHHH----HcC-CCEEEEEeecccc-----Ccch
Confidence               12699999998742 1 110        1224567777777776653    333 3689999997542     2345


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccC-----CC---C--CCCChhhHH
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAP-----LH---R--WLDVKNDLA  230 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-----~~---~--~~~~~~dva  230 (266)
                      .|..+|...+...+.     ...+++...|.|+.+..++..       .........|     .+   +  +...+ |+|
T Consensus       191 ~~~~sK~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~-------~~~~~~~g~~~~~~GdG~~~~~~~I~v~-DlA  257 (390)
T PLN02657        191 EFQRAKLKFEAELQA-----LDSDFTYSIVRPTAFFKSLGG-------QVEIVKDGGPYVMFGDGKLCACKPISEA-DLA  257 (390)
T ss_pred             HHHHHHHHHHHHHHh-----ccCCCCEEEEccHHHhcccHH-------HHHhhccCCceEEecCCcccccCceeHH-HHH
Confidence            688889888776643     235899999999887643211       1111111111     01   1  23344 999


Q ss_pred             HHHHHHccCCCCcccccEEEEcC-CccccCCC
Q 024517          231 STVIYLISDGSRYMTGTTIYVDG-AQSITRPR  261 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dg-G~~~~~~~  261 (266)
                      +.+..++.+.  ...|+.+.+.| +..++-.+
T Consensus       258 ~~i~~~~~~~--~~~~~~~~Iggp~~~~S~~E  287 (390)
T PLN02657        258 SFIADCVLDE--SKINKVLPIGGPGKALTPLE  287 (390)
T ss_pred             HHHHHHHhCc--cccCCEEEcCCCCcccCHHH
Confidence            9998887542  23578899865 34555443

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.57  E-value=3e-13  Score=120.48  Aligned_cols=222  Identities=13%  Similarity=0.098  Sum_probs=140.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccc-cHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERR-LSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +.+++|||||+|.||++++++|+++|++|+++++... ..+....+.   . ..++.++..|+.+..       +     
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~---~-~~~~~~~~~Di~~~~-------~-----  182 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF---G-NPRFELIRHDVVEPI-------L-----  182 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc---c-CCceEEEECcccccc-------c-----
Confidence            4568999999999999999999999999999884321 111111111   1 135667777776532       1     


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC--------
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG--------  154 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~--------  154 (266)
                        .++|+|||+|+...+.. .    ..+-...+++|+.++..+++++...      +.++|++||.......        
T Consensus       183 --~~~D~ViHlAa~~~~~~-~----~~~p~~~~~~Nv~gT~nLleaa~~~------g~r~V~~SS~~VYg~~~~~p~~E~  249 (436)
T PLN02166        183 --LEVDQIYHLACPASPVH-Y----KYNPVKTIKTNVMGTLNMLGLAKRV------GARFLLTSTSEVYGDPLEHPQKET  249 (436)
T ss_pred             --cCCCEEEECceeccchh-h----ccCHHHHHHHHHHHHHHHHHHHHHh------CCEEEEECcHHHhCCCCCCCCCcc
Confidence              25899999997632211 1    1233678899999999999888543      2489999987532110        


Q ss_pred             ------CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--cHHHHHHHhhccCCC------
Q 024517          155 ------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKLVREAAPLH------  220 (266)
Q Consensus       155 ------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~------  220 (266)
                            +......|+.+|.+.+.+++...+.   .++++..+.|+.+..|.......  -..+........+..      
T Consensus       250 ~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~  326 (436)
T PLN02166        250 YWGNVNPIGERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGK  326 (436)
T ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCC
Confidence                  1112456999999999999888665   46888888888888775321100  112222222222221      


Q ss_pred             ---CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCCc
Q 024517          221 ---RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       221 ---~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                         .+... +|+++++..++...   . +..+++.+|..++..++
T Consensus       327 ~~rdfi~V-~Dva~ai~~~~~~~---~-~giyNIgs~~~~Si~el  366 (436)
T PLN02166        327 QTRSFQYV-SDLVDGLVALMEGE---H-VGPFNLGNPGEFTMLEL  366 (436)
T ss_pred             eEEeeEEH-HHHHHHHHHHHhcC---C-CceEEeCCCCcEeHHHH
Confidence               12333 49999998888532   2 34788877766554433

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.56  E-value=1.9e-13  Score=116.69  Aligned_cols=214  Identities=16%  Similarity=0.168  Sum_probs=142.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      .+|||||+|.||++++++|.++|+.|+.+++ ........          ..+.++.+|+++.+  .+.+.++..     
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----------~~~~~~~~d~~~~~--~~~~~~~~~-----   64 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL----------SGVEFVVLDLTDRD--LVDELAKGV-----   64 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc----------cccceeeecccchH--HHHHHHhcC-----
Confidence            3999999999999999999999999999984 33322211          25678889999876  555544321     


Q ss_pred             CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-----------
Q 024517           86 NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-----------  154 (266)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-----------  154 (266)
                      . |.+||+|+........  .+  +....+.+|+.++..+++++..    .+ ..++|+.||.......           
T Consensus        65 ~-d~vih~aa~~~~~~~~--~~--~~~~~~~~nv~gt~~ll~aa~~----~~-~~~~v~~ss~~~~~~~~~~~~~~E~~~  134 (314)
T COG0451          65 P-DAVIHLAAQSSVPDSN--AS--DPAEFLDVNVDGTLNLLEAARA----AG-VKRFVFASSVSVVYGDPPPLPIDEDLG  134 (314)
T ss_pred             C-CEEEEccccCchhhhh--hh--CHHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEeCCCceECCCCCCCCcccccC
Confidence            1 9999999874221111  11  3456899999999999999976    12 4688886664433321           


Q ss_pred             CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc---cHHHHHHHhhccC---CC-------C
Q 024517          155 LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---QERAVKLVREAAP---LH-------R  221 (266)
Q Consensus       155 ~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~~---~~-------~  221 (266)
                      +..+...|+.+|.+.+.+++....   ..++.+..+.|+.+..|.......   ............|   ..       .
T Consensus       135 ~~~p~~~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (314)
T COG0451         135 PPRPLNPYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRD  211 (314)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEe
Confidence            001111599999999999999988   357999999999888876544311   1111212222222   11       1


Q ss_pred             CCCChhhHHHHHHHHccCCCCcccccEEEEcCCc
Q 024517          222 WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ  255 (266)
Q Consensus       222 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~  255 (266)
                      +...+ |+++++..++......    .+++..+.
T Consensus       212 ~i~v~-D~a~~~~~~~~~~~~~----~~ni~~~~  240 (314)
T COG0451         212 FVYVD-DVADALLLALENPDGG----VFNIGSGT  240 (314)
T ss_pred             eEeHH-HHHHHHHHHHhCCCCc----EEEeCCCC
Confidence            23344 9999999999754322    77787764

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.55  E-value=1.2e-12  Score=97.61  Aligned_cols=217  Identities=12%  Similarity=0.058  Sum_probs=151.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +..+|+|.||-+.+|.+|+..|-++++-|.-+| .+.. +            ...-.++..|-+=.+  +-+.+++++.+
T Consensus         2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe-~------------Ad~sI~V~~~~swtE--Qe~~v~~~vg~   66 (236)
T KOG4022|consen    2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENE-Q------------ADSSILVDGNKSWTE--QEQSVLEQVGS   66 (236)
T ss_pred             CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccc-c------------ccceEEecCCcchhH--HHHHHHHHHHH
Confidence            467899999999999999999999999998887 3211 1            011223333333334  66677777776


Q ss_pred             Hh--CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           83 IL--GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        83 ~~--g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+  .++|.+++-||.+.-...-...-.++.+-++...+.......+.+..+++.   +|.+-....-++..+  .|+..
T Consensus        67 sL~gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~---GGLL~LtGAkaAl~g--TPgMI  141 (236)
T KOG4022|consen   67 SLQGEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP---GGLLQLTGAKAALGG--TPGMI  141 (236)
T ss_pred             hhcccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC---CceeeecccccccCC--CCccc
Confidence            65  369999999987643322222223455666777777777777777777654   455555555555555  69999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhC--CCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          161 AYGACAASIHQLVRTAAMEIG--KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      .|+++|+|++.++++|+.+-.  +.|--+.+|.|=..+|||.++...+.++..+           +|-+.+++..+....
T Consensus       142 GYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADfssW-----------TPL~fi~e~flkWtt  210 (236)
T KOG4022|consen  142 GYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADFSSW-----------TPLSFISEHFLKWTT  210 (236)
T ss_pred             chhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCcccCc-----------ccHHHHHHHHHHHhc
Confidence            999999999999999998753  3467889999999999999876654443222           344688888887777


Q ss_pred             CCCCcccccEEEE
Q 024517          239 DGSRYMTGTTIYV  251 (266)
Q Consensus       239 ~~~~~~~G~~i~~  251 (266)
                      +.++--+|..+-+
T Consensus       211 ~~~RPssGsLlqi  223 (236)
T KOG4022|consen  211 ETSRPSSGSLLQI  223 (236)
T ss_pred             cCCCCCCCceEEE
Confidence            6666677766655

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.54  E-value=3e-13  Score=114.29  Aligned_cols=201  Identities=17%  Similarity=0.187  Sum_probs=132.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      ++|||||+|.||.+++++|.++|++|+++++.                       .+|+.+.+  ++.++++..     +
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~--~~~~~~~~~-----~   50 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPE--ALERLLRAI-----R   50 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHH--HHHHHHHhC-----C
Confidence            37999999999999999999999999988742                       36888887  888777652     6


Q ss_pred             CCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---------CCC
Q 024517           87 LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---------LYP  157 (266)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~~~  157 (266)
                      +|++||+++.... .    ......+..+++|+.++..+++++..    .  +.++|++||.....+.         +..
T Consensus        51 ~d~vi~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~~v~~Ss~~vy~~~~~~~~~E~~~~~  119 (287)
T TIGR01214        51 PDAVVNTAAYTDV-D----GAESDPEKAFAVNALAPQNLARAAAR----H--GARLVHISTDYVFDGEGKRPYREDDATN  119 (287)
T ss_pred             CCEEEECCccccc-c----ccccCHHHHHHHHHHHHHHHHHHHHH----c--CCeEEEEeeeeeecCCCCCCCCCCCCCC
Confidence            8999999986321 1    11233567789999999999988743    2  2489999986422110         012


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCC-------CCCCCChhhHH
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPL-------HRWLDVKNDLA  230 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva  230 (266)
                      ....|+.+|.+.+.+++.+       +.++..+.|+.+..+.....+ ............+.       ..+... +|++
T Consensus       120 ~~~~Y~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v-~Dva  190 (287)
T TIGR01214       120 PLNVYGQSKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRNF-VRTMLRLAGRGEELRVVDDQIGSPTYA-KDLA  190 (287)
T ss_pred             CcchhhHHHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCCH-HHHHHHHhhcCCCceEecCCCcCCcCH-HHHH
Confidence            3568999999999888765       357889999999877632111 11122222211111       112223 4999


Q ss_pred             HHHHHHccCCCCcccccEEEEcCCccccC
Q 024517          231 STVIYLISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      +++..++...  ..-++.+++-++..++.
T Consensus       191 ~a~~~~~~~~--~~~~~~~ni~~~~~~s~  217 (287)
T TIGR01214       191 RVIAALLQRL--ARARGVYHLANSGQCSW  217 (287)
T ss_pred             HHHHHHHhhc--cCCCCeEEEECCCCcCH
Confidence            9999988542  12345666655544443

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.53  E-value=1.9e-13  Score=116.48  Aligned_cols=209  Identities=13%  Similarity=0.117  Sum_probs=136.2

Q ss_pred             EEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCCCC
Q 024517            9 LLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLD   88 (266)
Q Consensus         9 lItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~id   88 (266)
                      |||||+|.||+++++.|.++|+.|+++.+.                      ..+|+++.+  ++.++++.     .++|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~~--~l~~~~~~-----~~~d   51 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQA--DVEAFFAK-----EKPT   51 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCHH--HHHHHHhc-----cCCC
Confidence            699999999999999999999988766421                      137999887  77777665     2689


Q ss_pred             EEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-------------C
Q 024517           89 AFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-------------L  155 (266)
Q Consensus        89 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-------------~  155 (266)
                      +|||+|+......    ...++.+..++.|+.++..+++.+...    + -.++|++||..-..+.             +
T Consensus        52 ~Vih~A~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~  122 (306)
T PLN02725         52 YVILAAAKVGGIH----ANMTYPADFIRENLQIQTNVIDAAYRH----G-VKKLLFLGSSCIYPKFAPQPIPETALLTGP  122 (306)
T ss_pred             EEEEeeeeecccc----hhhhCcHHHHHHHhHHHHHHHHHHHHc----C-CCeEEEeCceeecCCCCCCCCCHHHhccCC
Confidence            9999998632111    011223456888999999998888643    2 3589999986432110             0


Q ss_pred             -CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----cHHHHHH----HhhccC--------
Q 024517          156 -YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKL----VREAAP--------  218 (266)
Q Consensus       156 -~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~----~~~~~~--------  218 (266)
                       .|....|+.+|.+.+.+++.+.++   .++++..+.|+.+..|.......    -......    .....|        
T Consensus       123 ~~p~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g  199 (306)
T PLN02725        123 PEPTNEWYAIAKIAGIKMCQAYRIQ---YGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSG  199 (306)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCC
Confidence             111235999999999999887766   36899999999998875321100    0111111    111111        


Q ss_pred             --CCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCCc
Q 024517          219 --LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       219 --~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                        ...+...+ |+++++..++...   ..++.+++.+|..++..++
T Consensus       200 ~~~~~~i~v~-Dv~~~~~~~~~~~---~~~~~~ni~~~~~~s~~e~  241 (306)
T PLN02725        200 SPLREFLHVD-DLADAVVFLMRRY---SGAEHVNVGSGDEVTIKEL  241 (306)
T ss_pred             CeeeccccHH-HHHHHHHHHHhcc---ccCcceEeCCCCcccHHHH
Confidence              11234455 9999999988642   1335568877776655443

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.51  E-value=3.9e-13  Score=111.17  Aligned_cols=159  Identities=19%  Similarity=0.240  Sum_probs=121.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +++||||||+|-||.+.+.+|.++|+.|+++|| .....+...+++.....+..+.++..|+.|.+  .+++++++.   
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~--~L~kvF~~~---   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAE--ALEKLFSEV---   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHH--HHHHHHhhc---
Confidence            678999999999999999999999999999993 33334455555555544578999999999998  888888875   


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC--------
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL--------  155 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~--------  155 (266)
                        ++|.++|-|+.....     .+.++.....+.|+.+++.++.....+    + ...+|+.||..- ++.+        
T Consensus        77 --~fd~V~Hfa~~~~vg-----eS~~~p~~Y~~nNi~gtlnlLe~~~~~----~-~~~~V~sssatv-YG~p~~ip~te~  143 (343)
T KOG1371|consen   77 --KFDAVMHFAALAAVG-----ESMENPLSYYHNNIAGTLNLLEVMKAH----N-VKALVFSSSATV-YGLPTKVPITEE  143 (343)
T ss_pred             --CCceEEeehhhhccc-----hhhhCchhheehhhhhHHHHHHHHHHc----C-CceEEEecceee-ecCcceeeccCc
Confidence              699999998763322     223344778899999999988776554    3 368888877543 3311        


Q ss_pred             --C-CCchhhHHhHHHHHHHHHHHHHHhC
Q 024517          156 --Y-PGAAAYGACAASIHQLVRTAAMEIG  181 (266)
Q Consensus       156 --~-~~~~~y~~sK~a~~~~~~~la~e~~  181 (266)
                        . .+...|+.+|.+++..++.....+.
T Consensus       144 ~~t~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  144 DPTDQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCCCCCCCcchhhhHHHHHHHHhhhcccc
Confidence              1 2678999999999999998887654

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.50  E-value=2.7e-12  Score=106.86  Aligned_cols=186  Identities=12%  Similarity=0.192  Sum_probs=144.9

Q ss_pred             CCcEEEEecC-CCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSD-GDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa-~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +..+|||.|. +.-+++.+|..|-++|+-|+++.+..+.++..+.-.     ..++.....|..++.  ++...+.+..+
T Consensus         2 R~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~-----~~dI~~L~ld~~~~~--~~~~~l~~f~~   74 (299)
T PF08643_consen    2 RKEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED-----RPDIRPLWLDDSDPS--SIHASLSRFAS   74 (299)
T ss_pred             ceeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc-----CCCCCCcccCCCCCc--chHHHHHHHHH
Confidence            3568999995 799999999999999999999984333333332221     256888888888888  78888877776


Q ss_pred             HhC--------------CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC-CCCeEEEEe-
Q 024517           83 ILG--------------NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK-AGGSIVFLT-  146 (266)
Q Consensus        83 ~~g--------------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~iv~is-  146 (266)
                      .+.              ++..+|..-....+.+|+...+.++|...++.|+..++...+.++|+++.+. .+.+||.++ 
T Consensus        75 ~L~~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~P  154 (299)
T PF08643_consen   75 LLSRPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNP  154 (299)
T ss_pred             HhcCCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeC
Confidence            554              3455555544433667888999999999999999999999999999998722 135666655 


Q ss_pred             cccccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q 024517          147 SIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD  198 (266)
Q Consensus       147 s~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~  198 (266)
                      |+.+...  .|..+.-.+...++.+|.+.|++|+.+.+|.|..+..|.++-.
T Consensus       155 si~ssl~--~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  155 SISSSLN--PPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             chhhccC--CCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            5444443  5888999999999999999999999999999999999998865

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.49  E-value=9.1e-13  Score=112.15  Aligned_cols=148  Identities=14%  Similarity=0.076  Sum_probs=104.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      ++|||||+|.||++++++|.++| +|+.+++..                   ..+..|++|.+  ++.++++..     +
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~-------------------~~~~~Dl~d~~--~~~~~~~~~-----~   54 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHS-------------------TDYCGDFSNPE--GVAETVRKI-----R   54 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEecccc-------------------ccccCCCCCHH--HHHHHHHhc-----C
Confidence            69999999999999999999999 788777421                   02346999988  887777642     6


Q ss_pred             CCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc---------CCCC
Q 024517           87 LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER---------GLYP  157 (266)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~---------~~~~  157 (266)
                      +|++||+|+.....     ...++-+..+++|+.++.++++++...      +.++|++||..-..+         .+..
T Consensus        55 ~D~Vih~Aa~~~~~-----~~~~~~~~~~~~N~~~~~~l~~aa~~~------g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~  123 (299)
T PRK09987         55 PDVIVNAAAHTAVD-----KAESEPEFAQLLNATSVEAIAKAANEV------GAWVVHYSTDYVFPGTGDIPWQETDATA  123 (299)
T ss_pred             CCEEEECCccCCcc-----hhhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEccceEECCCCCCCcCCCCCCC
Confidence            89999999864221     111233566788999999999887542      357999988532211         0112


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCC
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDE  199 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~  199 (266)
                      +...|+.+|.+.+.+++....       +...+.|+++..|.
T Consensus       124 P~~~Yg~sK~~~E~~~~~~~~-------~~~ilR~~~vyGp~  158 (299)
T PRK09987        124 PLNVYGETKLAGEKALQEHCA-------KHLIFRTSWVYAGK  158 (299)
T ss_pred             CCCHHHHHHHHHHHHHHHhCC-------CEEEEecceecCCC
Confidence            445799999999998865432       23667777776653

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.49  E-value=4.4e-13  Score=115.04  Aligned_cols=208  Identities=14%  Similarity=0.137  Sum_probs=131.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      +++||||+|.||++++++|+++|++|++++|....   ...+..     ..+.++.+|++|++  ++.++++       +
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~---~~~l~~-----~~v~~v~~Dl~d~~--~l~~al~-------g   64 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRK---ASFLKE-----WGAELVYGDLSLPE--TLPPSFK-------G   64 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHH---hhhHhh-----cCCEEEECCCCCHH--HHHHHHC-------C
Confidence            69999999999999999999999999988843221   111111     35788999999988  7766663       6


Q ss_pred             CCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHHhH
Q 024517           87 LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACA  166 (266)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK  166 (266)
                      +|++||+++.. . .        +.....++|+.++.++++++...    + -.++|++||..+..    .+...|..+|
T Consensus        65 ~d~Vi~~~~~~-~-~--------~~~~~~~~~~~~~~~l~~aa~~~----g-vkr~I~~Ss~~~~~----~~~~~~~~~K  125 (317)
T CHL00194         65 VTAIIDASTSR-P-S--------DLYNAKQIDWDGKLALIEAAKAA----K-IKRFIFFSILNAEQ----YPYIPLMKLK  125 (317)
T ss_pred             CCEEEECCCCC-C-C--------CccchhhhhHHHHHHHHHHHHHc----C-CCEEEEeccccccc----cCCChHHHHH
Confidence            89999987542 1 1        11234567778887777776542    2 25899999864321    1234577888


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHH---HHh-hccCCCCCCCChhhHHHHHHHHccCCCC
Q 024517          167 ASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK---LVR-EAAPLHRWLDVKNDLASTVIYLISDGSR  242 (266)
Q Consensus       167 ~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~dva~~~~~l~s~~~~  242 (266)
                      ...+.+.+       ..+++...+.|+.+...+...... .....   +.. ...+. .+...+ |+|+.+..++.... 
T Consensus       126 ~~~e~~l~-------~~~l~~tilRp~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~i~v~-Dva~~~~~~l~~~~-  194 (317)
T CHL00194        126 SDIEQKLK-------KSGIPYTIFRLAGFFQGLISQYAI-PILEKQPIWITNESTPI-SYIDTQ-DAAKFCLKSLSLPE-  194 (317)
T ss_pred             HHHHHHHH-------HcCCCeEEEeecHHhhhhhhhhhh-hhccCCceEecCCCCcc-CccCHH-HHHHHHHHHhcCcc-
Confidence            87766543       247888889998654322111000 00000   000 00010 122334 99999998886432 


Q ss_pred             cccccEEEEcCCccccCCCc
Q 024517          243 YMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       243 ~~~G~~i~~dgG~~~~~~~~  262 (266)
                       ..|+.+++.|+..++-.++
T Consensus       195 -~~~~~~ni~g~~~~s~~el  213 (317)
T CHL00194        195 -TKNKTFPLVGPKSWNSSEI  213 (317)
T ss_pred             -ccCcEEEecCCCccCHHHH
Confidence             3588999988877665444

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.44  E-value=1.6e-12  Score=122.11  Aligned_cols=227  Identities=14%  Similarity=0.091  Sum_probs=140.1

Q ss_pred             EEEEecCCCchHHHHHHHHH--HcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            7 RVLLTSDGDEISKNIAFHLA--KRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~--~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      ++|||||+|.||++++++|+  ++|++|++++|............ ... ..++.++..|+++++.......++++    
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~-~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~l----   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAA-YWG-ADRVVPLVGDLTEPGLGLSEADIAEL----   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHH-hcC-CCcEEEEecccCCccCCcCHHHHHHh----
Confidence            69999999999999999999  57999999985433232222211 111 14688999999986410111122222    


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC----------
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG----------  154 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~----------  154 (266)
                      .++|++||+|+.....     .   ......++|+.++..+++.+..    .+ ..++|++||.......          
T Consensus        76 ~~~D~Vih~Aa~~~~~-----~---~~~~~~~~nv~gt~~ll~~a~~----~~-~~~~v~~SS~~v~g~~~~~~~e~~~~  142 (657)
T PRK07201         76 GDIDHVVHLAAIYDLT-----A---DEEAQRAANVDGTRNVVELAER----LQ-AATFHHVSSIAVAGDYEGVFREDDFD  142 (657)
T ss_pred             cCCCEEEECceeecCC-----C---CHHHHHHHHhHHHHHHHHHHHh----cC-CCeEEEEeccccccCccCccccccch
Confidence            4799999999863221     1   1345678899999888887643    22 3689999987543110          


Q ss_pred             -CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc----ccHHH---HHHHhh---ccCC----
Q 024517          155 -LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV----GQERA---VKLVRE---AAPL----  219 (266)
Q Consensus       155 -~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~----~~~~~---~~~~~~---~~~~----  219 (266)
                       .......|+.+|...+.+++.      ..++++..+.|+.|..+......    .....   ......   ..|.    
T Consensus       143 ~~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (657)
T PRK07201        143 EGQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPD  216 (657)
T ss_pred             hhcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCC
Confidence             011235699999999988753      24799999999999875321110    00001   111100   1111    


Q ss_pred             --CCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCC
Q 024517          220 --HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       220 --~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                        .....+.+|+++++..++..  ....|+.+++.++..++..
T Consensus       217 ~~~~~~v~vddva~ai~~~~~~--~~~~g~~~ni~~~~~~s~~  257 (657)
T PRK07201        217 GGRTNIVPVDYVADALDHLMHK--DGRDGQTFHLTDPKPQRVG  257 (657)
T ss_pred             CCeeeeeeHHHHHHHHHHHhcC--cCCCCCEEEeCCCCCCcHH
Confidence              00112235999999988853  3467899999776555443

>PLN02996 fatty acyl-CoA reductase

Probab=99.44  E-value=3.5e-12  Score=115.36  Aligned_cols=228  Identities=11%  Similarity=0.035  Sum_probs=139.3

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC---eEEEEecccccHHHHHHH-------------hcccCC------CCCeEE
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC---RLVLVGNERRLSSVAEKM-------------MGSLKG------GQPVEV   60 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~---~v~~~~~~~~~~~~~~~~-------------~~~~~~------~~~~~~   60 (266)
                      +++|+++||||||.||+.++..|++.+.   +|+++.|..+.+...+++             .+..+.      ..++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            4799999999999999999999998653   466666543322222111             111110      147899


Q ss_pred             EEEecCCCc-----hHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhc
Q 024517           61 VGLDMEEDR-----EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE  135 (266)
Q Consensus        61 ~~~D~~~~~-----~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  135 (266)
                      +..|+++++     .+..++++       ..+|+|||+|+....    .    ++.+..+++|+.++..+++.+... . 
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~-------~~vD~ViH~AA~v~~----~----~~~~~~~~~Nv~gt~~ll~~a~~~-~-  151 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMW-------KEIDIVVNLAATTNF----D----ERYDVALGINTLGALNVLNFAKKC-V-  151 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHH-------hCCCEEEECccccCC----c----CCHHHHHHHHHHHHHHHHHHHHhc-C-
Confidence            999999652     11222332       258999999986321    1    245778999999999999887542 1 


Q ss_pred             cCCCCeEEEEecccccccCC-------CC---------------------------------------------------
Q 024517          136 SKAGGSIVFLTSIIGAERGL-------YP---------------------------------------------------  157 (266)
Q Consensus       136 ~~~~g~iv~iss~~~~~~~~-------~~---------------------------------------------------  157 (266)
                       + -.+++++||........       ++                                                   
T Consensus       152 -~-~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (491)
T PLN02996        152 -K-VKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKL  229 (491)
T ss_pred             -C-CCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHh
Confidence             1 24889988865431100       00                                                   


Q ss_pred             --CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc---c----HHHHHHHhh-ccC-------CC
Q 024517          158 --GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---Q----ERAVKLVRE-AAP-------LH  220 (266)
Q Consensus       158 --~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~---~----~~~~~~~~~-~~~-------~~  220 (266)
                        ....|+.+|++.+.+++..+     .++.+..+.|..|..+...+...   .    ......... ..+       ..
T Consensus       230 ~~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~  304 (491)
T PLN02996        230 HGWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSV  304 (491)
T ss_pred             CCCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCee
Confidence              11359999999999996542     37999999999998876433211   0    111110111 110       01


Q ss_pred             CCCCChhhHHHHHHHHccCCC-CcccccEEEEcCC
Q 024517          221 RWLDVKNDLASTVIYLISDGS-RYMTGTTIYVDGA  254 (266)
Q Consensus       221 ~~~~~~~dva~~~~~l~s~~~-~~~~G~~i~~dgG  254 (266)
                      +-..+.+|++++++.++.... ..-.++++++.+|
T Consensus       305 ~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        305 LDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             cceecccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence            112233599999888775321 1124678899877

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.39  E-value=2e-11  Score=101.20  Aligned_cols=170  Identities=19%  Similarity=0.236  Sum_probs=102.2

Q ss_pred             EecCCCchHHHHHHHHHHcCC--eEEEEecccccHHHHHHHhcccC-----------CCCCeEEEEEecCCCchHHHHHH
Q 024517           10 LTSDGDEISKNIAFHLAKRGC--RLVLVGNERRLSSVAEKMMGSLK-----------GGQPVEVVGLDMEEDREGAFDEA   76 (266)
Q Consensus        10 ItGa~~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~D~~~~~~~~v~~~   76 (266)
                      ||||||.+|.++..+|++++.  +|+.+.|....++..+++.+...           ...++.++..|++++.-+--...
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999987  88888766555455555532211           03699999999998652111222


Q ss_pred             HHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccc--ccC
Q 024517           77 VDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGA--ERG  154 (266)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~--~~~  154 (266)
                      .+++.   ..+|+|||||+......        .++...++|+.|+..+++.+..    .+ ..++++|||....  ...
T Consensus        81 ~~~L~---~~v~~IiH~Aa~v~~~~--------~~~~~~~~NV~gt~~ll~la~~----~~-~~~~~~iSTa~v~~~~~~  144 (249)
T PF07993_consen   81 YQELA---EEVDVIIHCAASVNFNA--------PYSELRAVNVDGTRNLLRLAAQ----GK-RKRFHYISTAYVAGSRPG  144 (249)
T ss_dssp             HHHHH---HH--EEEE--SS-SBS---------S--EEHHHHHHHHHHHHHHHTS----SS----EEEEEEGGGTTS-TT
T ss_pred             hhccc---cccceeeecchhhhhcc--------cchhhhhhHHHHHHHHHHHHHh----cc-CcceEEeccccccCCCCC
Confidence            33332   25899999998644332        3345678899999999988852    22 3499999993211  110


Q ss_pred             ----------------CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q 024517          155 ----------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD  198 (266)
Q Consensus       155 ----------------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~  198 (266)
                                      .......|..||...|.+++..+.+   .|+.+..+.||.|-..
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~g~  201 (249)
T PF07993_consen  145 TIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIVGD  201 (249)
T ss_dssp             T--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE-S
T ss_pred             cccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCccccc
Confidence                            0123468999999999999998876   4788999999998773

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK05865 hypothetical protein; Provisional

Probab=99.37  E-value=6.8e-12  Score=118.51  Aligned_cols=183  Identities=17%  Similarity=0.245  Sum_probs=124.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      +++||||+|.||++++++|+++|++|+++++....     ..      ..++.++.+|+++.+  ++.++++       .
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~-----~~------~~~v~~v~gDL~D~~--~l~~al~-------~   61 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPD-----SW------PSSADFIAADIRDAT--AVESAMT-------G   61 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchh-----hc------ccCceEEEeeCCCHH--HHHHHHh-------C
Confidence            69999999999999999999999999998843211     11      125778999999988  7777664       5


Q ss_pred             CCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHHhH
Q 024517           87 LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACA  166 (266)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK  166 (266)
                      +|++||+|+....              .+++|+.++.++++++    .+.+ .+++|++||..                |
T Consensus        62 vD~VVHlAa~~~~--------------~~~vNv~GT~nLLeAa----~~~g-vkr~V~iSS~~----------------K  106 (854)
T PRK05865         62 ADVVAHCAWVRGR--------------NDHINIDGTANVLKAM----AETG-TGRIVFTSSGH----------------Q  106 (854)
T ss_pred             CCEEEECCCcccc--------------hHHHHHHHHHHHHHHH----HHcC-CCeEEEECCcH----------------H
Confidence            8999999975211              3578888887776655    3333 46899999852                7


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhh--ccCCC------CCCCChhhHHHHHHHHcc
Q 024517          167 ASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE--AAPLH------RWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       167 ~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~dva~~~~~l~s  238 (266)
                      .+.+.+++    +   .++++..+.|+.+..|...      .+......  ..+.+      .+...+ |+++++..++.
T Consensus       107 ~aaE~ll~----~---~gl~~vILRp~~VYGP~~~------~~i~~ll~~~v~~~G~~~~~~dfIhVd-DVA~Ai~~aL~  172 (854)
T PRK05865        107 PRVEQMLA----D---CGLEWVAVRCALIFGRNVD------NWVQRLFALPVLPAGYADRVVQVVHSD-DAQRLLVRALL  172 (854)
T ss_pred             HHHHHHHH----H---cCCCEEEEEeceEeCCChH------HHHHHHhcCceeccCCCCceEeeeeHH-HHHHHHHHHHh
Confidence            77766553    2   4789999999999877421      11111111  11111      133445 99999988875


Q ss_pred             CCCCcccccEEEEcCCccccCC
Q 024517          239 DGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                      ..  ...|..+++.+|..++..
T Consensus       173 ~~--~~~ggvyNIgsg~~~Si~  192 (854)
T PRK05865        173 DT--VIDSGPVNLAAPGELTFR  192 (854)
T ss_pred             CC--CcCCCeEEEECCCcccHH
Confidence            32  223567888777665543

>PLN02778 3,5-epimerase/4-reductase

Probab=99.35  E-value=6.6e-11  Score=100.64  Aligned_cols=201  Identities=10%  Similarity=0.108  Sum_probs=118.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      .+++|||||+|.||++++++|.++|++|+...                          .|+++.+  .+...++.     
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~--------------------------~~~~~~~--~v~~~l~~-----   55 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS--------------------------GRLENRA--SLEADIDA-----   55 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec--------------------------CccCCHH--HHHHHHHh-----
Confidence            46799999999999999999999999886431                          2344444  45544443     


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccc-c-----------
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGA-E-----------  152 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~-~-----------  152 (266)
                      .++|+|||+|+...... . +...++-...+++|+.++.++++++...      +.+.+++||..-. .           
T Consensus        56 ~~~D~ViH~Aa~~~~~~-~-~~~~~~p~~~~~~Nv~gt~~ll~aa~~~------gv~~v~~sS~~vy~~~~~~p~~~~~~  127 (298)
T PLN02778         56 VKPTHVFNAAGVTGRPN-V-DWCESHKVETIRANVVGTLTLADVCRER------GLVLTNYATGCIFEYDDAHPLGSGIG  127 (298)
T ss_pred             cCCCEEEECCcccCCCC-c-hhhhhCHHHHHHHHHHHHHHHHHHHHHh------CCCEEEEecceEeCCCCCCCcccCCC
Confidence            26899999998742211 1 1122345678999999999999998653      1234555543211 0           


Q ss_pred             -c-C--CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccC---CCC-CCC
Q 024517          153 -R-G--LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAP---LHR-WLD  224 (266)
Q Consensus       153 -~-~--~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~---~~~-~~~  224 (266)
                       . .  +.+....|+.+|.+.+.+++..+..   .++|+     ++...+...   ....+........+   .++ +..
T Consensus       128 ~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~~---~~lr~-----~~~~~~~~~---~~~~fi~~~~~~~~~~~~~~s~~y  196 (298)
T PLN02778        128 FKEEDTPNFTGSFYSKTKAMVEELLKNYENV---CTLRV-----RMPISSDLS---NPRNFITKITRYEKVVNIPNSMTI  196 (298)
T ss_pred             CCcCCCCCCCCCchHHHHHHHHHHHHHhhcc---EEeee-----cccCCcccc---cHHHHHHHHHcCCCeeEcCCCCEE
Confidence             0 0  0112357999999999999876532   24444     221111000   01112222222211   112 333


Q ss_pred             ChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCCc
Q 024517          225 VKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       225 ~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      .+ |++++++.++...   .+| .+++.++..++..++
T Consensus       197 v~-D~v~al~~~l~~~---~~g-~yNigs~~~iS~~el  229 (298)
T PLN02778        197 LD-ELLPISIEMAKRN---LTG-IYNFTNPGVVSHNEI  229 (298)
T ss_pred             HH-HHHHHHHHHHhCC---CCC-eEEeCCCCcccHHHH
Confidence            44 8888888888532   234 888877666554443

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.35  E-value=4.6e-11  Score=94.18  Aligned_cols=173  Identities=13%  Similarity=0.134  Sum_probs=116.4

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      |+|+||+|.+|+.++++|+++|++|+++. +.++.++           ..++.++.+|+.|.+  ++.++++       +
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-----------~~~~~~~~~d~~d~~--~~~~al~-------~   60 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-----------SPGVEIIQGDLFDPD--SVKAALK-------G   60 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-----------CTTEEEEESCTTCHH--HHHHHHT-------T
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-----------ccccccceeeehhhh--hhhhhhh-------h
Confidence            69999999999999999999999999998 5444443           168999999999987  7766664       6


Q ss_pred             CCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC-------CCc
Q 024517           87 LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY-------PGA  159 (266)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-------~~~  159 (266)
                      .|++|+++|.. ..         +            ...++.+++.+++.+ -.+++++|+.........       +..
T Consensus        61 ~d~vi~~~~~~-~~---------~------------~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~~~~~~~~~~~  117 (183)
T PF13460_consen   61 ADAVIHAAGPP-PK---------D------------VDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPGLFSDEDKPIF  117 (183)
T ss_dssp             SSEEEECCHST-TT---------H------------HHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTSEEEGGTCGGG
T ss_pred             cchhhhhhhhh-cc---------c------------ccccccccccccccc-cccceeeeccccCCCCCcccccccccch
Confidence            89999999752 11         1            555666777666665 569999998765443110       112


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCC-CCCCChhhHHHHHHHHcc
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH-RWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s  238 (266)
                      ..|...|...+.+.    +   ..+++...+.|+.+..+.......-..       ..+.. .+.+.+ |+|+.++.++.
T Consensus       118 ~~~~~~~~~~e~~~----~---~~~~~~~ivrp~~~~~~~~~~~~~~~~-------~~~~~~~~i~~~-DvA~~~~~~l~  182 (183)
T PF13460_consen  118 PEYARDKREAEEAL----R---ESGLNWTIVRPGWIYGNPSRSYRLIKE-------GGPQGVNFISRE-DVAKAIVEALE  182 (183)
T ss_dssp             HHHHHHHHHHHHHH----H---HSTSEEEEEEESEEEBTTSSSEEEESS-------TSTTSHCEEEHH-HHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHH----H---hcCCCEEEEECcEeEeCCCcceeEEec-------cCCCCcCcCCHH-HHHHHHHHHhC
Confidence            35566665554333    2   248999999999998765321100000       11111 223444 99999998874

...

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.31  E-value=1.7e-10  Score=103.82  Aligned_cols=156  Identities=18%  Similarity=0.195  Sum_probs=113.2

Q ss_pred             EecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCCCCE
Q 024517           10 LTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDA   89 (266)
Q Consensus        10 ItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~id~   89 (266)
                      |+||++|+|.++++.+...|+.|+.+.+.....        ......++..+.+|.+..+  ..                
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~--------~~~~~~~~~~~~~d~~~~~--~~----------------   96 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTW--------AAGWGDRFGALVFDATGIT--DP----------------   96 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCcccccc--------ccCcCCcccEEEEECCCCC--CH----------------
Confidence            888899999999999999999999876221100        0000123333334444433  21                


Q ss_pred             EEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHHhHHHH
Q 024517           90 FVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASI  169 (266)
Q Consensus        90 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~  169 (266)
                                         +++        .+.+.+++..++.|..   +|+||+++|..+.     .....|+++|+++
T Consensus        97 -------------------~~l--------~~~~~~~~~~l~~l~~---~griv~i~s~~~~-----~~~~~~~~akaal  141 (450)
T PRK08261         97 -------------------ADL--------KALYEFFHPVLRSLAP---CGRVVVLGRPPEA-----AADPAAAAAQRAL  141 (450)
T ss_pred             -------------------HHH--------HHHHHHHHHHHHhccC---CCEEEEEcccccc-----CCchHHHHHHHHH
Confidence                               111        1334567777787754   6899999997653     2345799999999


Q ss_pred             HHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCcccccEE
Q 024517          170 HQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTI  249 (266)
Q Consensus       170 ~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  249 (266)
                      .+|+|++++|+ +.+++++.|.|+.                            ..+ ++++..+.|+++....+++|+.+
T Consensus       142 ~gl~rsla~E~-~~gi~v~~i~~~~----------------------------~~~-~~~~~~~~~l~s~~~a~~~g~~i  191 (450)
T PRK08261        142 EGFTRSLGKEL-RRGATAQLVYVAP----------------------------GAE-AGLESTLRFFLSPRSAYVSGQVV  191 (450)
T ss_pred             HHHHHHHHHHh-hcCCEEEEEecCC----------------------------CCH-HHHHHHHHHhcCCccCCccCcEE
Confidence            99999999999 6799999998874                            123 48889999999998899999999


Q ss_pred             EEcCCcc
Q 024517          250 YVDGAQS  256 (266)
Q Consensus       250 ~~dgG~~  256 (266)
                      .++++..
T Consensus       192 ~~~~~~~  198 (450)
T PRK08261        192 RVGAADA  198 (450)
T ss_pred             EecCCcc
Confidence            9999864

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.26  E-value=3.7e-10  Score=93.38  Aligned_cols=182  Identities=16%  Similarity=0.197  Sum_probs=123.7

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCCC
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNL   87 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~i   87 (266)
                      +||||++|.+|.++++.|. .+..|+.+++.+                       +|++|++  .+.+++++.     ++
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~--~v~~~i~~~-----~P   51 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPD--AVLEVIRET-----RP   51 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChH--HHHHHHHhh-----CC
Confidence            8999999999999999999 667888876321                       7999999  999999886     79


Q ss_pred             CEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---C------CCC
Q 024517           88 DAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---L------YPG  158 (266)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---~------~~~  158 (266)
                      |+|||+|.+....     .-..+-+..+.+|..++.++++++-..      +..+|+||+-.-.++.   +      ..+
T Consensus        52 DvVIn~AAyt~vD-----~aE~~~e~A~~vNa~~~~~lA~aa~~~------ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P  120 (281)
T COG1091          52 DVVINAAAYTAVD-----KAESEPELAFAVNATGAENLARAAAEV------GARLVHISTDYVFDGEKGGPYKETDTPNP  120 (281)
T ss_pred             CEEEECccccccc-----cccCCHHHHHHhHHHHHHHHHHHHHHh------CCeEEEeecceEecCCCCCCCCCCCCCCC
Confidence            9999999884221     222346888999999999999999654      5799999975432221   0      235


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCC----CC--CCChhhHHHH
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH----RW--LDVKNDLAST  232 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~dva~~  232 (266)
                      ...|+.||.+.+..++...    +   +...|...++....-...  ...+.+...+..++.    .+  .+.-.|+|+.
T Consensus       121 ~nvYG~sKl~GE~~v~~~~----~---~~~I~Rtswv~g~~g~nF--v~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~  191 (281)
T COG1091         121 LNVYGRSKLAGEEAVRAAG----P---RHLILRTSWVYGEYGNNF--VKTMLRLAKEGKELKVVDDQYGSPTYTEDLADA  191 (281)
T ss_pred             hhhhhHHHHHHHHHHHHhC----C---CEEEEEeeeeecCCCCCH--HHHHHHHhhcCCceEEECCeeeCCccHHHHHHH
Confidence            6789999999999987664    2   223333334433221110  112222222222221    11  3445699999


Q ss_pred             HHHHccCC
Q 024517          233 VIYLISDG  240 (266)
Q Consensus       233 ~~~l~s~~  240 (266)
                      +..|+...
T Consensus       192 i~~ll~~~  199 (281)
T COG1091         192 ILELLEKE  199 (281)
T ss_pred             HHHHHhcc
Confidence            99988654

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.25  E-value=3.8e-10  Score=95.75  Aligned_cols=177  Identities=18%  Similarity=0.201  Sum_probs=126.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcC-CeEEEEecccccHHHHHHHhcccC--------CCCCeEEEEEecCCCchHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRG-CRLVLVGNERRLSSVAEKMMGSLK--------GGQPVEVVGLDMEEDREGAFDEA   76 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~v~~~   76 (266)
                      +++++|||||.+|+.+..+|+.+- ++|+...|.+..+...+++++...        ...++.++..|++.+.-+--..-
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            579999999999999999999774 588877766555555555543332        25789999999996552111222


Q ss_pred             HHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC--
Q 024517           77 VDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG--  154 (266)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~--  154 (266)
                      ++++.   +.+|.|+||+....+.        ....++...|+.|+..+++.+..     ++...+.++||++.....  
T Consensus        81 ~~~La---~~vD~I~H~gA~Vn~v--------~pYs~L~~~NVlGT~evlrLa~~-----gk~Kp~~yVSsisv~~~~~~  144 (382)
T COG3320          81 WQELA---ENVDLIIHNAALVNHV--------FPYSELRGANVLGTAEVLRLAAT-----GKPKPLHYVSSISVGETEYY  144 (382)
T ss_pred             HHHHh---hhcceEEecchhhccc--------CcHHHhcCcchHhHHHHHHHHhc-----CCCceeEEEeeeeecccccc
Confidence            33332   3699999998764332        23467778999999999887743     114569999998664321  


Q ss_pred             ----------------CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccc
Q 024517          155 ----------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI  202 (266)
Q Consensus       155 ----------------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~  202 (266)
                                      .......|+-||.+.+.+++.....    |+++..+.||+|-.+....
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r----GLpv~I~Rpg~I~gds~tG  204 (382)
T COG3320         145 SNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR----GLPVTIFRPGYITGDSRTG  204 (382)
T ss_pred             CCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhc----CCCeEEEecCeeeccCccC
Confidence                            0123478999999999999877653    8999999999998776633

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.24  E-value=9.5e-10  Score=86.05  Aligned_cols=170  Identities=19%  Similarity=0.283  Sum_probs=113.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      +++||||+ |+|.++++.|+++|++|++++ +.++.+++...+..    ..++.++.+|++|.+  +++++++.+.+.++
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~----~~~i~~~~~Dv~d~~--sv~~~i~~~l~~~g   74 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT----PESITPLPLDYHDDD--ALKLAIKSTIEKNG   74 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc----CCcEEEEEccCCCHH--HHHHHHHHHHHHcC
Confidence            68999998 788889999999999999988 54444444333321    257888999999999  99999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHHh
Q 024517           86 NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGAC  165 (266)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~s  165 (266)
                      ++|.+|+.+-..                       ++-.+...+-+.-.+.+ +-++++|-...+..+            
T Consensus        75 ~id~lv~~vh~~-----------------------~~~~~~~~~~~~gv~~~-~~~~~h~~gs~~~~~------------  118 (177)
T PRK08309         75 PFDLAVAWIHSS-----------------------AKDALSVVCRELDGSSE-TYRLFHVLGSAASDP------------  118 (177)
T ss_pred             CCeEEEEecccc-----------------------chhhHHHHHHHHccCCC-CceEEEEeCCcCCch------------
Confidence            999999887442                       23334444433322222 347888876544211            


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC-CCCcc
Q 024517          166 AASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD-GSRYM  244 (266)
Q Consensus       166 K~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~-~~~~~  244 (266)
                              +......+..+...--|..|++..+.                   ..||.|-+ |+++.+...+.. ...++
T Consensus       119 --------~~~~~~~~~~~~~~~~i~lgf~~~~~-------------------~~rwlt~~-ei~~gv~~~~~~~~~~~~  170 (177)
T PRK08309        119 --------RIPSEKIGPARCSYRRVILGFVLEDT-------------------YSRWLTHE-EISDGVIKAIESDADEHV  170 (177)
T ss_pred             --------hhhhhhhhhcCCceEEEEEeEEEeCC-------------------ccccCchH-HHHHHHHHHHhcCCCeEE
Confidence                    11112222334555567788874432                   24677887 888888887754 44566


Q ss_pred             ccc
Q 024517          245 TGT  247 (266)
Q Consensus       245 ~G~  247 (266)
                      .|+
T Consensus       171 ~g~  173 (177)
T PRK08309        171 VGT  173 (177)
T ss_pred             EEE
Confidence            665

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.23  E-value=9.9e-10  Score=94.02  Aligned_cols=176  Identities=16%  Similarity=0.160  Sum_probs=126.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcC--CeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRG--CRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++.++|||||+|.+|++++++|.+.+  .++.++|.......+..+.....  ..++.++.+|+.+..  ++.+.++   
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~--~~~v~~~~~D~~~~~--~i~~a~~---   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFR--SGRVTVILGDLLDAN--SISNAFQ---   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhccc--CCceeEEecchhhhh--hhhhhcc---
Confidence            67899999999999999999999998  68999883332222222221111  268999999999988  7777764   


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-------
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-------  154 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-------  154 (266)
                          .. .++|+|.. .. ..+   -..+-+..+++|+.|+.++...+...-     -.++|++||..-..++       
T Consensus        76 ----~~-~Vvh~aa~-~~-~~~---~~~~~~~~~~vNV~gT~nvi~~c~~~~-----v~~lIYtSs~~Vvf~g~~~~n~~  140 (361)
T KOG1430|consen   76 ----GA-VVVHCAAS-PV-PDF---VENDRDLAMRVNVNGTLNVIEACKELG-----VKRLIYTSSAYVVFGGEPIINGD  140 (361)
T ss_pred             ----Cc-eEEEeccc-cC-ccc---cccchhhheeecchhHHHHHHHHHHhC-----CCEEEEecCceEEeCCeecccCC
Confidence                45 67777654 12 222   222568889999999999888886653     2588888886544332       


Q ss_pred             ---CCCC--chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc
Q 024517          155 ---LYPG--AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV  204 (266)
Q Consensus       155 ---~~~~--~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~  204 (266)
                         ++|.  ...|+.+|+-.+.+++....   ..+....++.|..|..|--+...
T Consensus       141 E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~~  192 (361)
T KOG1430|consen  141 ESLPYPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRLL  192 (361)
T ss_pred             CCCCCccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCcccc
Confidence               1222  35899999999999987765   35688999999999988766543

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.22  E-value=7.5e-10  Score=112.30  Aligned_cols=232  Identities=16%  Similarity=0.109  Sum_probs=140.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcC----CeEEEEecccccHHHHHHHhccc---C-----CCCCeEEEEEecCCCchHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRG----CRLVLVGNERRLSSVAEKMMGSL---K-----GGQPVEVVGLDMEEDREGA   72 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g----~~v~~~~~~~~~~~~~~~~~~~~---~-----~~~~~~~~~~D~~~~~~~~   72 (266)
                      .++++|||++|.||.+++.+|++++    .+|+.+.|.....+..+++....   .     ...++.++..|++++.-.-
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5789999999999999999999987    57776665443333333332110   0     0136889999998763100


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccc
Q 024517           73 FDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAE  152 (266)
Q Consensus        73 v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~  152 (266)
                      -...++++   ...+|++||+|+....     ..+   +......|+.++..+++.+..    .+ ..+++++||.....
T Consensus      1051 ~~~~~~~l---~~~~d~iiH~Aa~~~~-----~~~---~~~~~~~nv~gt~~ll~~a~~----~~-~~~~v~vSS~~v~~ 1114 (1389)
T TIGR03443      1051 SDEKWSDL---TNEVDVIIHNGALVHW-----VYP---YSKLRDANVIGTINVLNLCAE----GK-AKQFSFVSSTSALD 1114 (1389)
T ss_pred             CHHHHHHH---HhcCCEEEECCcEecC-----ccC---HHHHHHhHHHHHHHHHHHHHh----CC-CceEEEEeCeeecC
Confidence            01122332   2469999999986421     122   334456799999999887743    22 35899999975431


Q ss_pred             cC---------------C-----------CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc
Q 024517          153 RG---------------L-----------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ  206 (266)
Q Consensus       153 ~~---------------~-----------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~  206 (266)
                      ..               .           ......|+.+|.+.+.+++..+.    .|+++..+.||.|..+........
T Consensus      1115 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~ 1190 (1389)
T TIGR03443      1115 TEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDSKTGATNT 1190 (1389)
T ss_pred             cccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCCCcCCCCc
Confidence            10               0           00124599999999999887543    489999999999987643322111


Q ss_pred             HHHHHH-Hh-----hccCC---CCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCcc
Q 024517          207 ERAVKL-VR-----EAAPL---HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       207 ~~~~~~-~~-----~~~~~---~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      .++... ..     ...|.   .+-..+.++++++++.++........+..+.+.++..
T Consensus      1191 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~ 1249 (1389)
T TIGR03443      1191 DDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPR 1249 (1389)
T ss_pred             hhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCC
Confidence            222111 11     11221   1222344599999999875432223345666765543

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.18  E-value=6.9e-11  Score=96.23  Aligned_cols=99  Identities=12%  Similarity=0.160  Sum_probs=75.8

Q ss_pred             EEecC-CCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCCC
Q 024517            9 LLTSD-GDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNL   87 (266)
Q Consensus         9 lItGa-~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~i   87 (266)
                      .||.. ++|||+++|++|+++|++|+++++....       ...       ....+|+++.+  ++.++++++.+.++++
T Consensus        18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l-------~~~-------~~~~~Dv~d~~--s~~~l~~~v~~~~g~i   81 (227)
T TIGR02114        18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRAL-------KPE-------PHPNLSIREIE--TTKDLLITLKELVQEH   81 (227)
T ss_pred             eecCCcccHHHHHHHHHHHHCCCEEEEEcChhhc-------ccc-------cCCcceeecHH--HHHHHHHHHHHHcCCC
Confidence            34444 6789999999999999999998742111       100       02358999988  9999999999999999


Q ss_pred             CEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHH
Q 024517           88 DAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLK  127 (266)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  127 (266)
                      |++|||||+ ....++.+.+.++|+.+   +..+.+.+.+
T Consensus        82 DiLVnnAgv-~d~~~~~~~s~e~~~~~---~~~~~~~~~~  117 (227)
T TIGR02114        82 DILIHSMAV-SDYTPVYMTDLEQVQAS---DNLNEFLSKQ  117 (227)
T ss_pred             CEEEECCEe-ccccchhhCCHHHHhhh---cchhhhhccc
Confidence            999999998 45577888899999977   4446666555

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.16  E-value=1.7e-09  Score=91.43  Aligned_cols=211  Identities=13%  Similarity=0.178  Sum_probs=114.2

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      +|||||+|.||.+++++|+++|++|++++| .+......           ...  ..|+.. .  ...       ..+..
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~--~~~~~~-~--~~~-------~~~~~   57 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK-----------WEG--YKPWAP-L--AES-------EALEG   57 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc-----------cee--eecccc-c--chh-------hhcCC
Confidence            689999999999999999999999999984 33322110           000  112222 2  221       22357


Q ss_pred             CCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC----CC-----C
Q 024517           87 LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG----LY-----P  157 (266)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~----~~-----~  157 (266)
                      +|+|||+|+.....   .....+.....+++|+.++..+++++...-.  + ...+++.|+. +.++.    ++     +
T Consensus        58 ~D~Vvh~a~~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~-~~~~i~~S~~-~~yg~~~~~~~~E~~~~  130 (292)
T TIGR01777        58 ADAVINLAGEPIAD---KRWTEERKQEIRDSRIDTTRALVEAIAAAEQ--K-PKVFISASAV-GYYGTSEDRVFTEEDSP  130 (292)
T ss_pred             CCEEEECCCCCccc---ccCCHHHHHHHHhcccHHHHHHHHHHHhcCC--C-ceEEEEeeeE-EEeCCCCCCCcCcccCC
Confidence            99999999863211   1234455677889999998888888754310  0 1234444443 22221    00     1


Q ss_pred             -CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHh----hccCC----CCCCCChhh
Q 024517          158 -GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR----EAAPL----HRWLDVKND  228 (266)
Q Consensus       158 -~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~----~~~~~----~~~~~~~~d  228 (266)
                       ....|+..+...+...+    .....++.+..+.|+.+..+.... .  ........    .....    ..+... +|
T Consensus       131 ~~~~~~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~~~~~-~--~~~~~~~~~~~~~~~g~~~~~~~~i~v-~D  202 (292)
T TIGR01777       131 AGDDFLAELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGPKGGA-L--AKMLPPFRLGLGGPLGSGRQWFSWIHI-ED  202 (292)
T ss_pred             CCCChHHHHHHHHHHHhh----hchhcCCceEEEeeeeEECCCcch-h--HHHHHHHhcCcccccCCCCcccccEeH-HH
Confidence             11123333333333332    223357999999999998774211 0  11111110    00111    123344 49


Q ss_pred             HHHHHHHHccCCCCcccccEEEEcCCccccC
Q 024517          229 LASTVIYLISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       229 va~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      +++.+..++....  ..| .+.+-++..++.
T Consensus       203 va~~i~~~l~~~~--~~g-~~~~~~~~~~s~  230 (292)
T TIGR01777       203 LVQLILFALENAS--ISG-PVNATAPEPVRN  230 (292)
T ss_pred             HHHHHHHHhcCcc--cCC-ceEecCCCccCH
Confidence            9999999986432  234 566655554443

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.15  E-value=3e-10  Score=92.46  Aligned_cols=238  Identities=10%  Similarity=0.015  Sum_probs=155.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHH-HH-hcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAE-KM-MGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .+|++||||-+|.-|.-+|+.|+++|+.|+.+.|....-.... .+ ..-.....++.++.+|++|..  ++.++++++ 
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~--~l~r~l~~v-   77 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSS--NLLRILEEV-   77 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchH--HHHHHHHhc-
Confidence            3689999999999999999999999999998873211111110 11 111122356889999999998  999999887 


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc--------
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER--------  153 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~--------  153 (266)
                          .+|-+.|.++-+...     .+.++-+.+.+++..|+..++.+.--+- . + ..++..-||.. .++        
T Consensus        78 ----~PdEIYNLaAQS~V~-----vSFe~P~~T~~~~~iGtlrlLEaiR~~~-~-~-~~rfYQAStSE-~fG~v~~~pq~  144 (345)
T COG1089          78 ----QPDEIYNLAAQSHVG-----VSFEQPEYTADVDAIGTLRLLEAIRILG-E-K-KTRFYQASTSE-LYGLVQEIPQK  144 (345)
T ss_pred             ----Cchhheecccccccc-----ccccCcceeeeechhHHHHHHHHHHHhC-C-c-ccEEEecccHH-hhcCcccCccc
Confidence                789999998764333     3334557788899999999988764432 1 1 35666555532 222        


Q ss_pred             --CCCCCchhhHHhHHHHHHHHHHHHHHhC---CCCcEEEEEecCcccCCCcccccccHHHH------HHHhhccCCC-C
Q 024517          154 --GLYPGAAAYGACAASIHQLVRTAAMEIG---KHKIRVNGIARGLHLQDEYPIAVGQERAV------KLVREAAPLH-R  221 (266)
Q Consensus       154 --~~~~~~~~y~~sK~a~~~~~~~la~e~~---~~~i~v~~v~pG~v~t~~~~~~~~~~~~~------~~~~~~~~~~-~  221 (266)
                        .++.+.++|+++|.....++...+..|+   ..||-+|.=+|.-=+|-..++........      +........+ .
T Consensus       145 E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRD  224 (345)
T COG1089         145 ETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRD  224 (345)
T ss_pred             cCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEecccccccc
Confidence              2467889999999999999999988764   44777777666543333333321100000      0011122223 3


Q ss_pred             CCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCCc
Q 024517          222 WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       222 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      |+-.. |.+++++..+..+    ....+.+..|.+.+..++
T Consensus       225 WG~A~-DYVe~mwlmLQq~----~PddyViATg~t~sVref  260 (345)
T COG1089         225 WGHAK-DYVEAMWLMLQQE----EPDDYVIATGETHSVREF  260 (345)
T ss_pred             ccchH-HHHHHHHHHHccC----CCCceEEecCceeeHHHH
Confidence            77777 9999997777542    245566666766655444

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.14  E-value=2.5e-09  Score=100.75  Aligned_cols=143  Identities=13%  Similarity=0.068  Sum_probs=97.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      .+++|||||+|.||++++++|.++|++|...                          ..|++|.+  ++.+.+++.    
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~--------------------------~~~l~d~~--~v~~~i~~~----  427 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG--------------------------KGRLEDRS--SLLADIRNV----  427 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEee--------------------------ccccccHH--HHHHHHHhh----
Confidence            4579999999999999999999999877311                          13577777  777766553    


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccc-----------c
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAE-----------R  153 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~-----------~  153 (266)
                       ++|+|||+|+..... . .+...++-+..+++|+.++..+++++...      +.+++++||.....           +
T Consensus       428 -~pd~Vih~Aa~~~~~-~-~~~~~~~~~~~~~~N~~gt~~l~~a~~~~------g~~~v~~Ss~~v~~~~~~~~~~~~~p  498 (668)
T PLN02260        428 -KPTHVFNAAGVTGRP-N-VDWCESHKVETIRANVVGTLTLADVCREN------GLLMMNFATGCIFEYDAKHPEGSGIG  498 (668)
T ss_pred             -CCCEEEECCcccCCC-C-CChHHhCHHHHHHHHhHHHHHHHHHHHHc------CCeEEEEcccceecCCcccccccCCC
Confidence             699999999874211 1 12223456788999999999999998653      23566665532110           0


Q ss_pred             -----CCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEe
Q 024517          154 -----GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA  191 (266)
Q Consensus       154 -----~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~  191 (266)
                           .+.+....|+.+|.+.+.+++....   ...+|+..+.
T Consensus       499 ~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~  538 (668)
T PLN02260        499 FKEEDKPNFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPI  538 (668)
T ss_pred             CCcCCCCCCCCChhhHHHHHHHHHHHhhhh---heEEEEEEec
Confidence                 0012236899999999999987632   2346666554

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.14  E-value=4.3e-10  Score=95.00  Aligned_cols=200  Identities=14%  Similarity=0.093  Sum_probs=115.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      +++||||+|.+|++++++|+++|++|.++.|......           ...+..+.+|+.|++  ++.++++.. +.+..
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~d~~d~~--~l~~a~~~~-~~~~g   66 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-----------GPNEKHVKFDWLDED--TWDNPFSSD-DGMEP   66 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-----------CCCCccccccCCCHH--HHHHHHhcc-cCcCC
Confidence            4899999999999999999999999999884332111           024556778999998  888887543 22345


Q ss_pred             -CCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHHh
Q 024517           87 -LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGAC  165 (266)
Q Consensus        87 -id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~s  165 (266)
                       +|.++++++.. .       .  ..            ...+.+++.+++.+ -.+||++||.....+  .+       .
T Consensus        67 ~~d~v~~~~~~~-~-------~--~~------------~~~~~~i~aa~~~g-v~~~V~~Ss~~~~~~--~~-------~  114 (285)
T TIGR03649        67 EISAVYLVAPPI-P-------D--LA------------PPMIKFIDFARSKG-VRRFVLLSASIIEKG--GP-------A  114 (285)
T ss_pred             ceeEEEEeCCCC-C-------C--hh------------HHHHHHHHHHHHcC-CCEEEEeeccccCCC--Cc-------h
Confidence             89999987531 1       0  00            11123444455544 368999998543221  11       1


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHH--HHhhccCC--CCCCCChhhHHHHHHHHccCCC
Q 024517          166 AASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK--LVREAAPL--HRWLDVKNDLASTVIYLISDGS  241 (266)
Q Consensus       166 K~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~dva~~~~~l~s~~~  241 (266)
                      +...+.+.+    +  ..++....+.|+++...+...... .....  ......+.  ..+..++ |+|+.+..++....
T Consensus       115 ~~~~~~~l~----~--~~gi~~tilRp~~f~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~v~~~-Dva~~~~~~l~~~~  186 (285)
T TIGR03649       115 MGQVHAHLD----S--LGGVEYTVLRPTWFMENFSEEFHV-EAIRKENKIYSATGDGKIPFVSAD-DIARVAYRALTDKV  186 (285)
T ss_pred             HHHHHHHHH----h--ccCCCEEEEeccHHhhhhcccccc-cccccCCeEEecCCCCccCcccHH-HHHHHHHHHhcCCC
Confidence            222222211    1  137999999999876543211100 00000  00000011  1245555 99999999986532


Q ss_pred             CcccccEEEEcCCccccCCCc
Q 024517          242 RYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       242 ~~~~G~~i~~dgG~~~~~~~~  262 (266)
                        ..|+.+.+-|+..++-.++
T Consensus       187 --~~~~~~~l~g~~~~s~~ei  205 (285)
T TIGR03649       187 --APNTDYVVLGPELLTYDDV  205 (285)
T ss_pred             --cCCCeEEeeCCccCCHHHH
Confidence              2356666766666665444

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.12  E-value=3.1e-10  Score=95.96  Aligned_cols=203  Identities=18%  Similarity=0.216  Sum_probs=122.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      ++||||++|-||.++.+.|.++|++|+.+++.                       .+|++|.+  ++.+++++.     +
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~--~~~~~~~~~-----~   51 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPE--AVAKLLEAF-----K   51 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHH--HHHHHHHHH------
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHH--HHHHHHHHh-----C
Confidence            68999999999999999999999999988633                       37999988  888888765     6


Q ss_pred             CCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---------CCC
Q 024517           87 LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---------LYP  157 (266)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~~~  157 (266)
                      +|++||+|++..+     +.-.++-+..+.+|+.++..+++.+...      +.++|++||..-..+.         ...
T Consensus        52 pd~Vin~aa~~~~-----~~ce~~p~~a~~iN~~~~~~la~~~~~~------~~~li~~STd~VFdG~~~~~y~E~d~~~  120 (286)
T PF04321_consen   52 PDVVINCAAYTNV-----DACEKNPEEAYAINVDATKNLAEACKER------GARLIHISTDYVFDGDKGGPYTEDDPPN  120 (286)
T ss_dssp             -SEEEE------H-----HHHHHSHHHHHHHHTHHHHHHHHHHHHC------T-EEEEEEEGGGS-SSTSSSB-TTS---
T ss_pred             CCeEeccceeecH-----HhhhhChhhhHHHhhHHHHHHHHHHHHc------CCcEEEeeccEEEcCCcccccccCCCCC
Confidence            9999999987311     1223446778999999999999988542      5799999996432221         112


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccC----CC--CCCCChhhHHH
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAP----LH--RWLDVKNDLAS  231 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~dva~  231 (266)
                      +...|+-+|...+..++..    .+   +...+.++++..+.....  -...........+    ..  +..+..+|+|+
T Consensus       121 P~~~YG~~K~~~E~~v~~~----~~---~~~IlR~~~~~g~~~~~~--~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~  191 (286)
T PF04321_consen  121 PLNVYGRSKLEGEQAVRAA----CP---NALILRTSWVYGPSGRNF--LRWLLRRLRQGEPIKLFDDQYRSPTYVDDLAR  191 (286)
T ss_dssp             -SSHHHHHHHHHHHHHHHH-----S---SEEEEEE-SEESSSSSSH--HHHHHHHHHCTSEEEEESSCEE--EEHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHh----cC---CEEEEecceecccCCCch--hhhHHHHHhcCCeeEeeCCceeCCEEHHHHHH
Confidence            4679999999999888762    11   566677777766622111  1111122211111    11  12233459999


Q ss_pred             HHHHHccCCCC-cccccEEEEcCCccccC
Q 024517          232 TVIYLISDGSR-YMTGTTIYVDGAQSITR  259 (266)
Q Consensus       232 ~~~~l~s~~~~-~~~G~~i~~dgG~~~~~  259 (266)
                      .+..++..... .-.+.++.+.|...++.
T Consensus       192 ~i~~l~~~~~~~~~~~Giyh~~~~~~~S~  220 (286)
T PF04321_consen  192 VILELIEKNLSGASPWGIYHLSGPERVSR  220 (286)
T ss_dssp             HHHHHHHHHHH-GGG-EEEE---BS-EEH
T ss_pred             HHHHHHHhcccccccceeEEEecCcccCH
Confidence            99999864321 12245677766554443

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.10  E-value=4.4e-09  Score=96.59  Aligned_cols=132  Identities=12%  Similarity=0.140  Sum_probs=86.6

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC---eEEEEecccccHHHHHHHh-------------cccCC------CCCeEE
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC---RLVLVGNERRLSSVAEKMM-------------GSLKG------GQPVEV   60 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~---~v~~~~~~~~~~~~~~~~~-------------~~~~~------~~~~~~   60 (266)
                      +++|+++||||+|.||+.+++.|++.+.   +|+++.|....+...+++.             +..+.      ..++..
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            4799999999999999999999998764   5677665443333333331             11111      247899


Q ss_pred             EEEecCCCchHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCC
Q 024517           61 VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGG  140 (266)
Q Consensus        61 ~~~D~~~~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g  140 (266)
                      +..|+++++-+--....+.+.   ..+|+|||+|+....        .++.+..+++|+.++..+++.+... ..   -.
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~---~~vDiVIH~AA~v~f--------~~~~~~a~~vNV~GT~nLLelA~~~-~~---lk  261 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIA---KEVDVIINSAANTTF--------DERYDVAIDINTRGPCHLMSFAKKC-KK---LK  261 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHH---hcCCEEEECcccccc--------ccCHHHHHHHHHHHHHHHHHHHHHc-CC---CC
Confidence            999999973000001122222   259999999986321        1346788999999999999887543 11   24


Q ss_pred             eEEEEeccc
Q 024517          141 SIVFLTSII  149 (266)
Q Consensus       141 ~iv~iss~~  149 (266)
                      +++++||..
T Consensus       262 ~fV~vSTay  270 (605)
T PLN02503        262 LFLQVSTAY  270 (605)
T ss_pred             eEEEccCce
Confidence            688888754

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.08  E-value=7.4e-09  Score=84.36  Aligned_cols=225  Identities=16%  Similarity=0.132  Sum_probs=145.2

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHc--CCeEEEEe--cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKR--GCRLVLVG--NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~--g~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      ...|.++||||.+.||...+..+...  .++.+.++  .--......+++.    ...+..++..|+.+..  .+..++.
T Consensus         4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~----n~p~ykfv~~di~~~~--~~~~~~~   77 (331)
T KOG0747|consen    4 YKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVR----NSPNYKFVEGDIADAD--LVLYLFE   77 (331)
T ss_pred             CccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhc----cCCCceEeeccccchH--HHHhhhc
Confidence            34589999999999999999999976  34555444  1111122222222    2368899999999977  6665554


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc-----
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER-----  153 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~-----  153 (266)
                      .     .+||.++|-|........+     -+--..+..|++++..|++.......    -.++|++|+..-...     
T Consensus        78 ~-----~~id~vihfaa~t~vd~s~-----~~~~~~~~nnil~t~~Lle~~~~sg~----i~~fvhvSTdeVYGds~~~~  143 (331)
T KOG0747|consen   78 T-----EEIDTVIHFAAQTHVDRSF-----GDSFEFTKNNILSTHVLLEAVRVSGN----IRRFVHVSTDEVYGDSDEDA  143 (331)
T ss_pred             c-----CchhhhhhhHhhhhhhhhc-----CchHHHhcCCchhhhhHHHHHHhccC----eeEEEEecccceecCccccc
Confidence            3     5899999998764322111     12245678899999999988866542    258999997532211     


Q ss_pred             -----CCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhh--ccCCCC-----
Q 024517          154 -----GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE--AAPLHR-----  221 (266)
Q Consensus       154 -----~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~--~~~~~~-----  221 (266)
                           +...+..+|+++|+|.+.+++++.+.|   |+.+..+.-+.|..|-..+.-.-+.+......  ..|..+     
T Consensus       144 ~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~  220 (331)
T KOG0747|consen  144 VVGEASLLNPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQT  220 (331)
T ss_pred             cccccccCCCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccc
Confidence                 112356789999999999999999984   67888888888877765432222233222211  122111     


Q ss_pred             --CCCChhhHHHHHHHHccCCCCcccccEEEEcCC
Q 024517          222 --WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA  254 (266)
Q Consensus       222 --~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG  254 (266)
                        +.-. +|+.+++...+...   -.|+++++..-
T Consensus       221 rs~l~v-eD~~ea~~~v~~Kg---~~geIYNIgtd  251 (331)
T KOG0747|consen  221 RSYLYV-EDVSEAFKAVLEKG---ELGEIYNIGTD  251 (331)
T ss_pred             eeeEeH-HHHHHHHHHHHhcC---CccceeeccCc
Confidence              2223 48888887777442   36888887543

>PLN00016 RNA-binding protein; Provisional

Probab=99.07  E-value=6e-09  Score=91.66  Aligned_cols=209  Identities=14%  Similarity=0.106  Sum_probs=120.8

Q ss_pred             CCcEEEEe----cCCCchHHHHHHHHHHcCCeEEEEecc-cccHHHH----HHHhcccCCCCCeEEEEEecCCCchHHHH
Q 024517            4 QAKRVLLT----SDGDEISKNIAFHLAKRGCRLVLVGNE-RRLSSVA----EKMMGSLKGGQPVEVVGLDMEEDREGAFD   74 (266)
Q Consensus         4 ~~k~vlIt----Ga~~giG~~ia~~l~~~g~~v~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~D~~~~~~~~v~   74 (266)
                      ..++||||    ||+|.||.+++++|+++|++|++++|. .......    ...... . ...+.++.+|+++.+     
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l-~-~~~v~~v~~D~~d~~-----  123 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSEL-S-SAGVKTVWGDPADVK-----  123 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHh-h-hcCceEEEecHHHHH-----
Confidence            45789999    999999999999999999999999843 3222110    000000 0 124778888887622     


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC
Q 024517           75 EAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG  154 (266)
Q Consensus        75 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~  154 (266)
                      +++.     ..++|++||+++..          .           .++    +.++..+++.+ -.++|++||.......
T Consensus       124 ~~~~-----~~~~d~Vi~~~~~~----------~-----------~~~----~~ll~aa~~~g-vkr~V~~SS~~vyg~~  172 (378)
T PLN00016        124 SKVA-----GAGFDVVYDNNGKD----------L-----------DEV----EPVADWAKSPG-LKQFLFCSSAGVYKKS  172 (378)
T ss_pred             hhhc-----cCCccEEEeCCCCC----------H-----------HHH----HHHHHHHHHcC-CCEEEEEccHhhcCCC
Confidence            2221     13699999987530          0           112    23334344333 3589999997543211


Q ss_pred             CC-C-----CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCC-----C---
Q 024517          155 LY-P-----GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPL-----H---  220 (266)
Q Consensus       155 ~~-~-----~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-----~---  220 (266)
                      .. +     ....+. +|...+.+.+       ..++.+..+.|+.+..+...... ...+........+.     +   
T Consensus       173 ~~~p~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~~-~~~~~~~~~~~~~i~~~g~g~~~  243 (378)
T PLN00016        173 DEPPHVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKDC-EEWFFDRLVRGRPVPIPGSGIQL  243 (378)
T ss_pred             CCCCCCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCch-HHHHHHHHHcCCceeecCCCCee
Confidence            00 0     011112 6777776543       24789999999999887533211 11122222211111     0   


Q ss_pred             -CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCCc
Q 024517          221 -RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       221 -~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                       .+... +|+++++..++...  ...|+.+++.++..++-.++
T Consensus       244 ~~~i~v-~Dva~ai~~~l~~~--~~~~~~yni~~~~~~s~~el  283 (378)
T PLN00016        244 TQLGHV-KDLASMFALVVGNP--KAAGQIFNIVSDRAVTFDGM  283 (378)
T ss_pred             eceecH-HHHHHHHHHHhcCc--cccCCEEEecCCCccCHHHH
Confidence             12234 49999999988653  24578899987766655443

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.99  E-value=3.3e-09  Score=86.35  Aligned_cols=204  Identities=14%  Similarity=0.158  Sum_probs=113.2

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      ++||||+|-||++++.+|.+.|+.|+++.|. .+.+.             +....   +...+  .+....+      .+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~-------------~~~~~---v~~~~--~~~~~~~------~~   56 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQ-------------NLHPN---VTLWE--GLADALT------LG   56 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhh-------------hcCcc---ccccc--hhhhccc------CC
Confidence            5899999999999999999999999999843 33221             11111   11122  1111221      16


Q ss_pred             CCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhH---
Q 024517           87 LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG---  163 (266)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~---  163 (266)
                      +|++||.||.. -...-  .+.+.=+..+    .+-+..++.+.+.+.+.+.++++..-+|..|.++..  ....|.   
T Consensus        57 ~DavINLAG~~-I~~rr--Wt~~~K~~i~----~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~--~~~~~tE~~  127 (297)
T COG1090          57 IDAVINLAGEP-IAERR--WTEKQKEEIR----QSRINTTEKLVELIAASETKPKVLISASAVGYYGHS--GDRVVTEES  127 (297)
T ss_pred             CCEEEECCCCc-ccccc--CCHHHHHHHH----HHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCC--CceeeecCC
Confidence            99999999972 22221  2333333332    356667777777776555456666666777776642  211221   


Q ss_pred             -HhHHHHHHHHHHHHHH---hCCCCcEEEEEecCcccCCCcccccccHHHHHHHh-hccCCC----CCCCChhhHHHHHH
Q 024517          164 -ACAASIHQLVRTAAME---IGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR-EAAPLH----RWLDVKNDLASTVI  234 (266)
Q Consensus       164 -~sK~a~~~~~~~la~e---~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~dva~~~~  234 (266)
                       ...-.+..+++..-.+   ....|+||..+.-|.|.++.-..........+... .+...+    .|...+ |+++.|.
T Consensus       128 ~~g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhie-D~v~~I~  206 (297)
T COG1090         128 PPGDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIE-DLVNAIL  206 (297)
T ss_pred             CCCCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHH-HHHHHHH
Confidence             1223444444433222   23458999999999998753322111111111111 111111    133445 9999999


Q ss_pred             HHccCCCCccccc
Q 024517          235 YLISDGSRYMTGT  247 (266)
Q Consensus       235 ~l~s~~~~~~~G~  247 (266)
                      |++...  .+.|-
T Consensus       207 fll~~~--~lsGp  217 (297)
T COG1090         207 FLLENE--QLSGP  217 (297)
T ss_pred             HHHhCc--CCCCc
Confidence            999763  35553

>PRK12320 hypothetical protein; Provisional

Probab=98.97  E-value=4.7e-08  Score=91.01  Aligned_cols=191  Identities=15%  Similarity=0.222  Sum_probs=116.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      ++|||||+|.||++++++|.++|++|+++++....      ..     ..++.++.+|+++..   +.+++       .+
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~------~~-----~~~ve~v~~Dl~d~~---l~~al-------~~   60 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHD------AL-----DPRVDYVCASLRNPV---LQELA-------GE   60 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhh------cc-----cCCceEEEccCCCHH---HHHHh-------cC
Confidence            59999999999999999999999999998843211      00     136788999998743   22222       36


Q ss_pred             CCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHHhH
Q 024517           87 LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACA  166 (266)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK  166 (266)
                      +|++||+|+.. ..      .      ...+|+.++.++++++..    .  +.++|++||..+.     +.  .|.   
T Consensus        61 ~D~VIHLAa~~-~~------~------~~~vNv~Gt~nLleAA~~----~--GvRiV~~SS~~G~-----~~--~~~---  111 (699)
T PRK12320         61 ADAVIHLAPVD-TS------A------PGGVGITGLAHVANAAAR----A--GARLLFVSQAAGR-----PE--LYR---  111 (699)
T ss_pred             CCEEEEcCccC-cc------c------hhhHHHHHHHHHHHHHHH----c--CCeEEEEECCCCC-----Cc--ccc---
Confidence            89999999752 11      0      114688888888887743    2  3479999986321     11  122   


Q ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc--HHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCcc
Q 024517          167 ASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ--ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM  244 (266)
Q Consensus       167 ~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  244 (266)
                       ..+.+.    ..   .++.+..+.|..+..+........  ..+........|.. +... +|++++++.+++..   .
T Consensus       112 -~aE~ll----~~---~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI~-vIyV-dDvv~alv~al~~~---~  178 (699)
T PRK12320        112 -QAETLV----ST---GWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIR-VLHL-DDLVRFLVLALNTD---R  178 (699)
T ss_pred             -HHHHHH----Hh---cCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCceE-EEEH-HHHHHHHHHHHhCC---C
Confidence             122222    22   246788888888887743221100  11111111111211 1234 49999998888642   2


Q ss_pred             cccEEEEcCCccccCCC
Q 024517          245 TGTTIYVDGAQSITRPR  261 (266)
Q Consensus       245 ~G~~i~~dgG~~~~~~~  261 (266)
                      +| ++++.+|..++-.+
T Consensus       179 ~G-iyNIG~~~~~Si~e  194 (699)
T PRK12320        179 NG-VVDLATPDTTNVVT  194 (699)
T ss_pred             CC-EEEEeCCCeeEHHH
Confidence            45 89998887766443

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.92  E-value=1.4e-07  Score=77.12  Aligned_cols=204  Identities=15%  Similarity=0.140  Sum_probs=126.4

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .++.+++||||+|.||+++|..|..+|+.|+++| -..........+-.    ..++..+.-|+..+       ++.   
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~----~~~fel~~hdv~~p-------l~~---   90 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG----HPNFELIRHDVVEP-------LLK---   90 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc----CcceeEEEeechhH-------HHH---
Confidence            4678999999999999999999999999999998 33322222222211    24566666665543       444   


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC------
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL------  155 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~------  155 (266)
                          .+|.++|.|...++..-..     .--+++..|+.++.+....+...      +.++++.|+. ..++.+      
T Consensus        91 ----evD~IyhLAapasp~~y~~-----npvktIktN~igtln~lglakrv------~aR~l~aSTs-eVYgdp~~hpq~  154 (350)
T KOG1429|consen   91 ----EVDQIYHLAAPASPPHYKY-----NPVKTIKTNVIGTLNMLGLAKRV------GARFLLASTS-EVYGDPLVHPQV  154 (350)
T ss_pred             ----HhhhhhhhccCCCCccccc-----CccceeeecchhhHHHHHHHHHh------CceEEEeecc-cccCCcccCCCc
Confidence                3588888886544332221     12467889999999888777553      3577776664 344321      


Q ss_pred             ---------CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--cHHHHHHHhhccCCCCCC-
Q 024517          156 ---------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKLVREAAPLHRWL-  223 (266)
Q Consensus       156 ---------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~-  223 (266)
                               ......|.-.|...+.|+....++   .||.+-...+-.+..|.+.....  -..+.......-|+.-++ 
T Consensus       155 e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~  231 (350)
T KOG1429|consen  155 ETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGD  231 (350)
T ss_pred             cccccccCcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcC
Confidence                     235789999999999999988776   56665555554555554332211  112222222333322111 


Q ss_pred             -------CChhhHHHHHHHHccC
Q 024517          224 -------DVKNDLASTVIYLISD  239 (266)
Q Consensus       224 -------~~~~dva~~~~~l~s~  239 (266)
                             +--+|+.++++.|..+
T Consensus       232 G~qtRSF~yvsD~Vegll~Lm~s  254 (350)
T KOG1429|consen  232 GKQTRSFQYVSDLVEGLLRLMES  254 (350)
T ss_pred             CcceEEEEeHHHHHHHHHHHhcC
Confidence                   1224888888888754

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.81  E-value=7.3e-09  Score=84.91  Aligned_cols=209  Identities=17%  Similarity=0.158  Sum_probs=117.5

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCCC
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNL   87 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~i   87 (266)
                      |+|+||+|.+|+.+++.|++.+++|.++.|.. ..+..++++.     ..+.++.+|+.+.+  ++.++++       ++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~-~~~~~~~l~~-----~g~~vv~~d~~~~~--~l~~al~-------g~   65 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDP-SSDRAQQLQA-----LGAEVVEADYDDPE--SLVAALK-------GV   65 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSS-HHHHHHHHHH-----TTTEEEES-TT-HH--HHHHHHT-------TC
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEecc-chhhhhhhhc-----ccceEeecccCCHH--HHHHHHc-------CC
Confidence            68999999999999999999999999988554 2233444443     24567799999877  7766664       79


Q ss_pred             CEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC--CCCchhhHHh
Q 024517           88 DAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL--YPGAAAYGAC  165 (266)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~--~~~~~~y~~s  165 (266)
                      |.++++.+....      ..           ......+++++.+.    + =.++| .||........  ..+...+-..
T Consensus        66 d~v~~~~~~~~~------~~-----------~~~~~~li~Aa~~a----g-Vk~~v-~ss~~~~~~~~~~~~p~~~~~~~  122 (233)
T PF05368_consen   66 DAVFSVTPPSHP------SE-----------LEQQKNLIDAAKAA----G-VKHFV-PSSFGADYDESSGSEPEIPHFDQ  122 (233)
T ss_dssp             SEEEEESSCSCC------CH-----------HHHHHHHHHHHHHH----T--SEEE-ESEESSGTTTTTTSTTHHHHHHH
T ss_pred             ceEEeecCcchh------hh-----------hhhhhhHHHhhhcc----c-cceEE-EEEecccccccccccccchhhhh
Confidence            999998875320      11           11333445555443    1 13565 55554433210  0111222235


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHH---HHhhccCCC---CCCCChhhHHHHHHHHccC
Q 024517          166 AASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK---LVREAAPLH---RWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       166 K~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~dva~~~~~l~s~  239 (266)
                      |..++...+..       ++....|.||++................   ...-..+..   .+.+..+|+++.+..++..
T Consensus       123 k~~ie~~l~~~-------~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~  195 (233)
T PF05368_consen  123 KAEIEEYLRES-------GIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLD  195 (233)
T ss_dssp             HHHHHHHHHHC-------TSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHS
T ss_pred             hhhhhhhhhhc-------cccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcC
Confidence            66555444332       7999999999875432221110000000   000111111   1222335999999999988


Q ss_pred             CCCcccccEEEEcCCccccCCCc
Q 024517          240 GSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      +..+-.|..+.+.| ..++-.++
T Consensus       196 p~~~~~~~~~~~~~-~~~t~~ei  217 (233)
T PF05368_consen  196 PEKHNNGKTIFLAG-ETLTYNEI  217 (233)
T ss_dssp             GGGTTEEEEEEEGG-GEEEHHHH
T ss_pred             hHHhcCCEEEEeCC-CCCCHHHH
Confidence            65554788888844 55554443

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.74  E-value=3.6e-08  Score=86.53  Aligned_cols=77  Identities=26%  Similarity=0.336  Sum_probs=58.0

Q ss_pred             CCCcEEEEecC----------------CCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecC
Q 024517            3 NQAKRVLLTSD----------------GDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDME   66 (266)
Q Consensus         3 l~~k~vlItGa----------------~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   66 (266)
                      ++||++|||||                +|++|+++|++|+++|++|++++++...+         .+  ..  +..+|++
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~---------~~--~~--~~~~dv~  252 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLP---------TP--AG--VKRIDVE  252 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcccc---------CC--CC--cEEEccC
Confidence            68999999999                45599999999999999999998433221         01  11  3457888


Q ss_pred             CCchHHHHHHHHHHHHHhCCCCEEEEcCCCC
Q 024517           67 EDREGAFDEAVDKACQILGNLDAFVHCYTYE   97 (266)
Q Consensus        67 ~~~~~~v~~~~~~~~~~~g~id~li~~ag~~   97 (266)
                      +.+  ++.+.+   .+.++++|++|||||+.
T Consensus       253 ~~~--~~~~~v---~~~~~~~DilI~~Aav~  278 (399)
T PRK05579        253 SAQ--EMLDAV---LAALPQADIFIMAAAVA  278 (399)
T ss_pred             CHH--HHHHHH---HHhcCCCCEEEEccccc
Confidence            876  655544   45678999999999973

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.62  E-value=3e-06  Score=76.12  Aligned_cols=223  Identities=14%  Similarity=0.121  Sum_probs=135.7

Q ss_pred             CCcEEEEecCC-CchHHHHHHHHHHcCCeEEEEe-cc-cccHHHHHHHhcccC-CCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            4 QAKRVLLTSDG-DEISKNIAFHLAKRGCRLVLVG-NE-RRLSSVAEKMMGSLK-GGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         4 ~~k~vlItGa~-~giG~~ia~~l~~~g~~v~~~~-~~-~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      .+|++|||||+ +.||.+++.+|++.|++|+++. |- +...+..+.+-..+. .+...-++..+..+..  .|+.++++
T Consensus       395 ~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~Sys--DVdAlIew  472 (866)
T COG4982         395 GDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYS--DVDALIEW  472 (866)
T ss_pred             ccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchh--hHHHHHHH
Confidence            57899999999 7799999999999999999987 32 223334444433333 3567888888999988  99999999


Q ss_pred             HHHHhC--------------CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCC--CCeEE
Q 024517           80 ACQILG--------------NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA--GGSIV  143 (266)
Q Consensus        80 ~~~~~g--------------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~g~iv  143 (266)
                      +-+...              .+|.++--|.. ...+.+.+.. .+-+..+++.+.+...++-.+.++-..++-  .-+||
T Consensus       473 Ig~eq~~t~g~~s~~~k~a~~ptll~PFAAp-~v~G~l~~ag-sraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVV  550 (866)
T COG4982         473 IGDEQTETVGPQSIHIKLAWTPTLLFPFAAP-RVSGELADAG-SRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVV  550 (866)
T ss_pred             hccccccccCCcceecccccCcceeeecccC-CccCccccCC-chHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEE
Confidence            965321              25666666554 2333333322 234455666666666666555554332211  23555


Q ss_pred             EEecccccccCCCCCchhhHHhHHHHHHHHHHHHHHh--CCCCcEEEEEecCcccC-CCcccccccHHHHHHHhhccCCC
Q 024517          144 FLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI--GKHKIRVNGIARGLHLQ-DEYPIAVGQERAVKLVREAAPLH  220 (266)
Q Consensus       144 ~iss~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~--~~~~i~v~~v~pG~v~t-~~~~~~~~~~~~~~~~~~~~~~~  220 (266)
                      .-.|..   .+.+.+-..|+-+|.+++.++--...|-  +. .+.+-.-.-|++.. ..+...   . ....-.++... 
T Consensus       551 LPgSPN---rG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~-~vsl~~A~IGWtrGTGLMg~N---d-iiv~aiEk~GV-  621 (866)
T COG4982         551 LPGSPN---RGMFGGDGAYGESKLALDAVVNRWHSESSWAA-RVSLAHALIGWTRGTGLMGHN---D-IIVAAIEKAGV-  621 (866)
T ss_pred             ecCCCC---CCccCCCcchhhHHHHHHHHHHHhhccchhhH-HHHHhhhheeeeccccccCCc---c-hhHHHHHHhCc-
Confidence            555543   2236778999999999999887666552  21 13333334577663 333221   1 11111122222 


Q ss_pred             CCCCChhhHHHHHHHHccCC
Q 024517          221 RWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       221 ~~~~~~~dva~~~~~l~s~~  240 (266)
                      +.-+++ |++..++-|++.+
T Consensus       622 ~tyS~~-EmA~~LLgL~sae  640 (866)
T COG4982         622 RTYSTD-EMAFNLLGLASAE  640 (866)
T ss_pred             eecCHH-HHHHHHHhhccHH
Confidence            223344 9999999988764

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.58  E-value=2e-07  Score=78.80  Aligned_cols=81  Identities=15%  Similarity=0.215  Sum_probs=60.5

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEEecc----cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCR-LVLVGNE----RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAV   77 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~-v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~   77 (266)
                      +++|+++|+|+ ||+|++++..|++.|++ |++++|.    ++.+++.+++.+.   +..+.+..+|+++.+  +++..+
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~---~~~~~~~~~d~~~~~--~~~~~~  197 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQE---VPECIVNVYDLNDTE--KLKAEI  197 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhc---CCCceeEEechhhhh--HHHhhh
Confidence            56899999999 59999999999999996 9898843    5666666666433   234556678887766  555444


Q ss_pred             HHHHHHhCCCCEEEEcCCC
Q 024517           78 DKACQILGNLDAFVHCYTY   96 (266)
Q Consensus        78 ~~~~~~~g~id~li~~ag~   96 (266)
                      +       ..|++|||...
T Consensus       198 ~-------~~DilINaTp~  209 (289)
T PRK12548        198 A-------SSDILVNATLV  209 (289)
T ss_pred             c-------cCCEEEEeCCC
Confidence            3       46999999765

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.58  E-value=2.7e-07  Score=87.70  Aligned_cols=176  Identities=15%  Similarity=0.191  Sum_probs=130.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEeccc-ccHH---HHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNER-RLSS---VAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      ..|..+|+||-+|.|..+++.|.++|+ ++++++|.. +..-   ...++++.   |.++.+-..|++..+  ..+++++
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~---GVqV~vsT~nitt~~--ga~~Li~ 1841 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR---GVQVQVSTSNITTAE--GARGLIE 1841 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc---CeEEEEecccchhhh--hHHHHHH
Confidence            468899999999999999999999999 566666432 2111   22344433   667777778888877  7888887


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      +.. +.+.+..++|.|.+. ....+++.+.++|+..-+..+.++.++-+..-+.-.+-   -.+|.+||+.+-++  ..+
T Consensus      1842 ~s~-kl~~vGGiFnLA~VL-RD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~L---dyFv~FSSvscGRG--N~G 1914 (2376)
T KOG1202|consen 1842 ESN-KLGPVGGIFNLAAVL-RDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPEL---DYFVVFSSVSCGRG--NAG 1914 (2376)
T ss_pred             Hhh-hcccccchhhHHHHH-HhhhhcccChhHHHhhhccceeeeeehhhhhhhhCccc---ceEEEEEeecccCC--CCc
Confidence            654 458899999999874 55678889999999999999999998876654433232   48999999987666  478


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH  195 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v  195 (266)
                      ...|+-++.+++.+++.-..+    |..-.+|..|.|
T Consensus      1915 QtNYG~aNS~MERiceqRr~~----GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1915 QTNYGLANSAMERICEQRRHE----GFPGTAIQWGAI 1947 (2376)
T ss_pred             ccccchhhHHHHHHHHHhhhc----CCCcceeeeecc
Confidence            889999999999999765433    333344444443

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.57  E-value=1.1e-06  Score=77.72  Aligned_cols=134  Identities=13%  Similarity=0.142  Sum_probs=90.9

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC---eEEEEecccccHHHHHHHhc------------ccCC-CCCeEEEEEecC
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC---RLVLVGNERRLSSVAEKMMG------------SLKG-GQPVEVVGLDME   66 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~---~v~~~~~~~~~~~~~~~~~~------------~~~~-~~~~~~~~~D~~   66 (266)
                      +++|+++||||+|.+|+-+...|++---   ++++.-|+.+-++..+++..            ..+. -.++..+..|++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            4799999999999999999999997642   56665555444433333322            2121 367888999999


Q ss_pred             CCchHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEe
Q 024517           67 EDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLT  146 (266)
Q Consensus        67 ~~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~is  146 (266)
                      +++.+ +...-  .+.....+|+++|+|+..        ...+.++..+.+|.+|+..+.+.+.....-    -.++++|
T Consensus        90 ~~~LG-is~~D--~~~l~~eV~ivih~AAtv--------rFde~l~~al~iNt~Gt~~~l~lak~~~~l----~~~vhVS  154 (467)
T KOG1221|consen   90 EPDLG-ISESD--LRTLADEVNIVIHSAATV--------RFDEPLDVALGINTRGTRNVLQLAKEMVKL----KALVHVS  154 (467)
T ss_pred             CcccC-CChHH--HHHHHhcCCEEEEeeeee--------ccchhhhhhhhhhhHhHHHHHHHHHHhhhh----heEEEee
Confidence            87721 11111  111224799999999873        233667889999999999999988765432    4777777


Q ss_pred             ccccc
Q 024517          147 SIIGA  151 (266)
Q Consensus       147 s~~~~  151 (266)
                      +.-+.
T Consensus       155 TAy~n  159 (467)
T KOG1221|consen  155 TAYSN  159 (467)
T ss_pred             hhhee
Confidence            75543

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.53  E-value=6.5e-07  Score=71.30  Aligned_cols=82  Identities=21%  Similarity=0.304  Sum_probs=62.4

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++++++|+||+|++|+.+++.|+++|++|++++ +.++.+++.+.+.+..    ......+|..+.+  ++.+.++  
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~----~~~~~~~~~~~~~--~~~~~~~--   96 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF----GEGVGAVETSDDA--ARAAAIK--   96 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc----CCcEEEeeCCCHH--HHHHHHh--
Confidence            56889999999999999999999999999999998 6666666666664331    3345567887766  6555553  


Q ss_pred             HHHhCCCCEEEEcCCC
Q 024517           81 CQILGNLDAFVHCYTY   96 (266)
Q Consensus        81 ~~~~g~id~li~~ag~   96 (266)
                           +.|++|++.+.
T Consensus        97 -----~~diVi~at~~  107 (194)
T cd01078          97 -----GADVVFAAGAA  107 (194)
T ss_pred             -----cCCEEEECCCC
Confidence                 57999998654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.49  E-value=8.7e-07  Score=72.31  Aligned_cols=98  Identities=12%  Similarity=0.183  Sum_probs=65.2

Q ss_pred             EEEecCCCc-hHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            8 VLLTSDGDE-ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         8 vlItGa~~g-iG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      -.||+.++| +|+++|++|+++|++|+++++......       . . ..++.++.+     +  +...+.+.+.+.++.
T Consensus        18 R~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-------~-~-~~~v~~i~v-----~--s~~~m~~~l~~~~~~   81 (229)
T PRK06732         18 RGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-------E-P-HPNLSIIEI-----E--NVDDLLETLEPLVKD   81 (229)
T ss_pred             eeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-------C-C-CCCeEEEEE-----e--cHHHHHHHHHHHhcC
Confidence            356666655 999999999999999999884321110       0 0 124555543     2  334455555555678


Q ss_pred             CCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHH
Q 024517           87 LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAP  122 (266)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~  122 (266)
                      +|++||||+.. ...+....+.++|..++++|....
T Consensus        82 ~DivIh~AAvs-d~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         82 HDVLIHSMAVS-DYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             CCEEEeCCccC-Cceehhhhhhhhhhhhhhhhhhhc
Confidence            99999999984 445566677888888888765544

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.42  E-value=1.1e-06  Score=77.12  Aligned_cols=110  Identities=15%  Similarity=0.219  Sum_probs=71.3

Q ss_pred             CCCcEEEEecC---------------CCc-hHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecC
Q 024517            3 NQAKRVLLTSD---------------GDE-ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDME   66 (266)
Q Consensus         3 l~~k~vlItGa---------------~~g-iG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   66 (266)
                      ++||++|||||               |+| +|.++|++|..+|++|++++++....         .+  ..  ...+|++
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---------~~--~~--~~~~~v~  249 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---------TP--PG--VKSIKVS  249 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---------CC--CC--cEEEEec
Confidence            67999999999               556 99999999999999999887322111         11  12  2457888


Q ss_pred             CCchHHH-HHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCC--CCHHHHHHHHHccchHHHHHHHHHHH
Q 024517           67 EDREGAF-DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQ--VGEDEFKKLVKINFVAPWFLLKAVGR  131 (266)
Q Consensus        67 ~~~~~~v-~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~  131 (266)
                      +.+  ++ ++++++   .++++|++|+||++. ...+...  ...+.....+.+++...--+++.+..
T Consensus       250 ~~~--~~~~~~~~~---~~~~~D~~i~~Aavs-d~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~  311 (390)
T TIGR00521       250 TAE--EMLEAALNE---LAKDFDIFISAAAVA-DFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRK  311 (390)
T ss_pred             cHH--HHHHHHHHh---hcccCCEEEEccccc-cccccccccccccccCCceeEEEEeCcHHHHHHHh
Confidence            877  66 444433   347899999999984 3333221  11111122355677777666666543

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.37  E-value=2.8e-05  Score=61.80  Aligned_cols=191  Identities=14%  Similarity=0.163  Sum_probs=112.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC---eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGC---RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++++|||++|=+|++|.+.+..+|.   +.+..++                       -.+|+++..  +++.+++..  
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s-----------------------kd~DLt~~a--~t~~lF~~e--   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS-----------------------KDADLTNLA--DTRALFESE--   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc-----------------------ccccccchH--HHHHHHhcc--
Confidence            6899999999999999999998876   2333321                       127999988  889998764  


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc------------
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG------------  150 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~------------  150 (266)
                         ++..+||.|.-.+....-.....+-|+..+++|-    +.++.+.+.-.     .++++..|..-            
T Consensus        55 ---kPthVIhlAAmVGGlf~N~~ynldF~r~Nl~ind----NVlhsa~e~gv-----~K~vsclStCIfPdkt~yPIdEt  122 (315)
T KOG1431|consen   55 ---KPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQIND----NVLHSAHEHGV-----KKVVSCLSTCIFPDKTSYPIDET  122 (315)
T ss_pred             ---CCceeeehHhhhcchhhcCCCchHHHhhcceech----hHHHHHHHhch-----hhhhhhcceeecCCCCCCCCCHH
Confidence               7889999874322111111234455565555543    33343333211     12222222111            


Q ss_pred             --cccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc----HHHHHHHh----------
Q 024517          151 --AERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ----ERAVKLVR----------  214 (266)
Q Consensus       151 --~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~----~~~~~~~~----------  214 (266)
                        +.+.+.|.+..|+.+|..+.-..++.+.+++.   ...++.|-.+..|.-.-.+.+    +..+.++.          
T Consensus       123 mvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg~---~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~  199 (315)
T KOG1431|consen  123 MVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHGR---DYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDEL  199 (315)
T ss_pred             HhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCC---ceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceE
Confidence              01223577889999998888777888888654   455666665555433222111    11222211          


Q ss_pred             ----hccCCCCCCCChhhHHHHHHHHccC
Q 024517          215 ----EAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       215 ----~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                          .-.|++.+.-.. |+|+++.|++..
T Consensus       200 ~VwGsG~PlRqFiys~-DLA~l~i~vlr~  227 (315)
T KOG1431|consen  200 TVWGSGSPLRQFIYSD-DLADLFIWVLRE  227 (315)
T ss_pred             EEecCCChHHHHhhHh-HHHHHHHHHHHh
Confidence                123444444455 999999999964

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.22  E-value=0.00012  Score=61.11  Aligned_cols=195  Identities=17%  Similarity=0.151  Sum_probs=112.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      ..+|||||||.+|++++++|.++|++|++.. +.+......          ..+.+...|+.++.  ++...++      
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~----------~~v~~~~~d~~~~~--~l~~a~~------   62 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA----------GGVEVVLGDLRDPK--SLVAGAK------   62 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc----------CCcEEEEeccCCHh--HHHHHhc------
Confidence            3689999999999999999999999999988 544444332          36788889999988  7666663      


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHH
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA  164 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~  164 (266)
                       ++|.+++..+... ..+ .         .......+.....+..-    . + ...++.+|...+..    .....|..
T Consensus        63 -G~~~~~~i~~~~~-~~~-~---------~~~~~~~~~~~~a~~a~----~-~-~~~~~~~s~~~~~~----~~~~~~~~  120 (275)
T COG0702          63 -GVDGVLLISGLLD-GSD-A---------FRAVQVTAVVRAAEAAG----A-G-VKHGVSLSVLGADA----ASPSALAR  120 (275)
T ss_pred             -cccEEEEEecccc-ccc-c---------hhHHHHHHHHHHHHHhc----C-C-ceEEEEeccCCCCC----CCccHHHH
Confidence             6888888877532 111 0         01111223333333332    1 1 24667777654422    34567888


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEe-cCcccCCCcccccccHHHHHHHhhccCCCC----CCCChhhHHHHHHHHccC
Q 024517          165 CAASIHQLVRTAAMEIGKHKIRVNGIA-RGLHLQDEYPIAVGQERAVKLVREAAPLHR----WLDVKNDLASTVIYLISD  239 (266)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~-pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~dva~~~~~l~s~  239 (266)
                      +|...+...++.       |+.-..+. ++++.......   ............+...    .... +|++..+...+..
T Consensus       121 ~~~~~e~~l~~s-------g~~~t~lr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~-~d~a~~~~~~l~~  189 (275)
T COG0702         121 AKAAVEAALRSS-------GIPYTTLRRAAFYLGAGAAF---IEAAEAAGLPVIPRGIGRLSPIAV-DDVAEALAAALDA  189 (275)
T ss_pred             HHHHHHHHHHhc-------CCCeEEEecCeeeeccchhH---HHHHHhhCCceecCCCCceeeeEH-HHHHHHHHHHhcC
Confidence            888887766544       44433344 33332211110   0001111111111111    1333 4888888888765


Q ss_pred             CCCcccccEEEEcC
Q 024517          240 GSRYMTGTTIYVDG  253 (266)
Q Consensus       240 ~~~~~~G~~i~~dg  253 (266)
                      ..  ..|+.+.+-|
T Consensus       190 ~~--~~~~~~~l~g  201 (275)
T COG0702         190 PA--TAGRTYELAG  201 (275)
T ss_pred             Cc--ccCcEEEccC
Confidence            43  5666666644

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.22  E-value=2.5e-05  Score=64.27  Aligned_cols=209  Identities=11%  Similarity=0.051  Sum_probs=130.5

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .+|-++-|.||+|.+|+-++..|++.|-.|++-.|.++..-.--.....   -+++.++..|+.|++  +++++++.   
T Consensus        59 ~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGd---LGQvl~~~fd~~Ded--SIr~vvk~---  130 (391)
T KOG2865|consen   59 VSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGD---LGQVLFMKFDLRDED--SIRAVVKH---  130 (391)
T ss_pred             ccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccc---ccceeeeccCCCCHH--HHHHHHHh---
Confidence            5678899999999999999999999999999987555443322222222   268999999999999  99999874   


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhh
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY  162 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y  162 (266)
                          -+++||..|.. ....-++        .-++|+.++-.+++.+-+.-.     -++|.+|+..+.    ....+-|
T Consensus       131 ----sNVVINLIGrd-~eTknf~--------f~Dvn~~~aerlAricke~GV-----erfIhvS~Lgan----v~s~Sr~  188 (391)
T KOG2865|consen  131 ----SNVVINLIGRD-YETKNFS--------FEDVNVHIAERLARICKEAGV-----ERFIHVSCLGAN----VKSPSRM  188 (391)
T ss_pred             ----CcEEEEeeccc-cccCCcc--------cccccchHHHHHHHHHHhhCh-----hheeehhhcccc----ccChHHH
Confidence                48999999973 3222211        235677777777776644322     388999987643    3444566


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCC--C---C--hhhHHHHHHH
Q 024517          163 GACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWL--D---V--KNDLASTVIY  235 (266)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~--~~dva~~~~~  235 (266)
                      --+|++-+-.++.   ++.+    ..-|.|.-|....-+....-..++++ ....|+...+  |   |  ..|+|.+|..
T Consensus       189 LrsK~~gE~aVrd---afPe----AtIirPa~iyG~eDrfln~ya~~~rk-~~~~pL~~~GekT~K~PVyV~DVaa~Ivn  260 (391)
T KOG2865|consen  189 LRSKAAGEEAVRD---AFPE----ATIIRPADIYGTEDRFLNYYASFWRK-FGFLPLIGKGEKTVKQPVYVVDVAAAIVN  260 (391)
T ss_pred             HHhhhhhHHHHHh---hCCc----ceeechhhhcccchhHHHHHHHHHHh-cCceeeecCCcceeeccEEEehHHHHHHH
Confidence            7777777665543   2222    23355655544322211101112222 2333333222  1   1  1389999988


Q ss_pred             HccCCCCcccccEEEE
Q 024517          236 LISDGSRYMTGTTIYV  251 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~  251 (266)
                      .+-+.  .-.|.++..
T Consensus       261 AvkDp--~s~Gktye~  274 (391)
T KOG2865|consen  261 AVKDP--DSMGKTYEF  274 (391)
T ss_pred             hccCc--cccCceeee
Confidence            88654  356666665

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.14  E-value=1e-05  Score=72.92  Aligned_cols=76  Identities=26%  Similarity=0.320  Sum_probs=55.9

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |++++|+++|+|+++ +|.++|+.|+++|++|.+++ +. +..++..+++.+     ..+.++..|..+           
T Consensus         1 ~~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~-----------   63 (450)
T PRK14106          1 MELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE-----LGIELVLGEYPE-----------   63 (450)
T ss_pred             CCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-----cCCEEEeCCcch-----------
Confidence            788999999999888 99999999999999999998 43 333333444432     234555555554           


Q ss_pred             HHHHHhCCCCEEEEcCCC
Q 024517           79 KACQILGNLDAFVHCYTY   96 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~   96 (266)
                         +..+++|++|+++|.
T Consensus        64 ---~~~~~~d~vv~~~g~   78 (450)
T PRK14106         64 ---EFLEGVDLVVVSPGV   78 (450)
T ss_pred             ---hHhhcCCEEEECCCC
Confidence               112578999999987

>PRK09620 hypothetical protein; Provisional

Probab=98.13  E-value=3.4e-06  Score=68.71  Aligned_cols=35  Identities=31%  Similarity=0.514  Sum_probs=32.3

Q ss_pred             CCCcEEEEecCC----------------CchHHHHHHHHHHcCCeEEEEec
Q 024517            3 NQAKRVLLTSDG----------------DEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         3 l~~k~vlItGa~----------------~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      |+||+||||+|.                |.+|.++|++|+++|++|+++++
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g   51 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHG   51 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeC
Confidence            479999999997                99999999999999999998873

>PLN00106 malate dehydrogenase

Probab=98.09  E-value=4.9e-05  Score=65.11  Aligned_cols=152  Identities=13%  Similarity=0.112  Sum_probs=93.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ..++|+|+|++|.||..++..|+.++.  .++++| ++  ++.....+....   ..  ....++++.+  +....+   
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~---~~--~~i~~~~~~~--d~~~~l---   84 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHIN---TP--AQVRGFLGDD--QLGDAL---   84 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCC---cC--ceEEEEeCCC--CHHHHc---
Confidence            356899999999999999999997765  799999 54  222222332211   11  1223544443  333333   


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc----c-----
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG----A-----  151 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~----~-----  151 (266)
                          ...|++|+.||.. . .+     ..++...+..|+.....+    .+.+.+...++.++.+|...-    .     
T Consensus        85 ----~~aDiVVitAG~~-~-~~-----g~~R~dll~~N~~i~~~i----~~~i~~~~p~aivivvSNPvD~~~~i~t~~~  149 (323)
T PLN00106         85 ----KGADLVIIPAGVP-R-KP-----GMTRDDLFNINAGIVKTL----CEAVAKHCPNALVNIISNPVNSTVPIAAEVL  149 (323)
T ss_pred             ----CCCCEEEEeCCCC-C-CC-----CCCHHHHHHHHHHHHHHH----HHHHHHHCCCeEEEEeCCCccccHHHHHHHH
Confidence                4789999999973 2 11     123566677776665444    444444443466666666553    1     


Q ss_pred             -ccCCCCCchhhHHhHHHHHHHHHHHHHHhCC
Q 024517          152 -ERGLYPGAAAYGACAASIHQLVRTAAMEIGK  182 (266)
Q Consensus       152 -~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~  182 (266)
                       ...++|....|+.++.-...|-..++.++.-
T Consensus       150 ~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lgv  181 (323)
T PLN00106        150 KKAGVYDPKKLFGVTTLDVVRANTFVAEKKGL  181 (323)
T ss_pred             HHcCCCCcceEEEEecchHHHHHHHHHHHhCC
Confidence             1122566778888886666788888888754

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.00  E-value=1.2e-05  Score=64.33  Aligned_cols=224  Identities=20%  Similarity=0.203  Sum_probs=130.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHc-CC-eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKR-GC-RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~-g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ...++||||+-|.+|..+|..|..+ |. .|++.+-....+.+.          ..--++..|+-|..  +.++++-.  
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~----------~~GPyIy~DILD~K--~L~eIVVn--  108 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT----------DVGPYIYLDILDQK--SLEEIVVN--  108 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc----------ccCCchhhhhhccc--cHHHhhcc--
Confidence            3568999999999999999999876 76 455555222222221          12236667998888  77666533  


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC------
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL------  155 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~------  155 (266)
                         .+||.+||-....+.      ..+.+..-..++|+.|.-++++.+.++       ..-+|+-|..|..+..      
T Consensus       109 ---~RIdWL~HfSALLSA------vGE~NVpLA~~VNI~GvHNil~vAa~~-------kL~iFVPSTIGAFGPtSPRNPT  172 (366)
T KOG2774|consen  109 ---KRIDWLVHFSALLSA------VGETNVPLALQVNIRGVHNILQVAAKH-------KLKVFVPSTIGAFGPTSPRNPT  172 (366)
T ss_pred             ---cccceeeeHHHHHHH------hcccCCceeeeecchhhhHHHHHHHHc-------CeeEeecccccccCCCCCCCCC
Confidence               489999996433211      111222334789999999988877654       2345555554443321      


Q ss_pred             -----CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEE-ecCcccC--------CCcccccccHHHHHHHhhccCCCC
Q 024517          156 -----YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI-ARGLHLQ--------DEYPIAVGQERAVKLVREAAPLHR  221 (266)
Q Consensus       156 -----~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v-~pG~v~t--------~~~~~~~~~~~~~~~~~~~~~~~~  221 (266)
                           ..+...|+.||...+-+-+.+.-.+   |+.+-++ -||.+..        +.....+  .+..++-+..+++.+
T Consensus       173 PdltIQRPRTIYGVSKVHAEL~GEy~~hrF---g~dfr~~rfPg~is~~~pgggttdya~A~f--~~Al~~gk~tCylrp  247 (366)
T KOG2774|consen  173 PDLTIQRPRTIYGVSKVHAELLGEYFNHRF---GVDFRSMRFPGIISATKPGGGTTDYAIAIF--YDALQKGKHTCYLRP  247 (366)
T ss_pred             CCeeeecCceeechhHHHHHHHHHHHHhhc---CccceecccCcccccCCCCCCcchhHHHHH--HHHHHcCCcccccCC
Confidence                 1356789999999888877776553   3433333 2444432        2111100  011112122233322


Q ss_pred             CC----CChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCCcc
Q 024517          222 WL----DVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRMR  263 (266)
Q Consensus       222 ~~----~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~  263 (266)
                      -.    -..+|+-+.++.++...+..+.-.++++ .|++++.+++.
T Consensus       248 dtrlpmmy~~dc~~~~~~~~~a~~~~lkrr~ynv-t~~sftpee~~  292 (366)
T KOG2774|consen  248 DTRLPMMYDTDCMASVIQLLAADSQSLKRRTYNV-TGFSFTPEEIA  292 (366)
T ss_pred             CccCceeehHHHHHHHHHHHhCCHHHhhhheeee-ceeccCHHHHH
Confidence            11    1124787777777766666677777777 66777765543

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.97  E-value=3.1e-05  Score=67.35  Aligned_cols=75  Identities=17%  Similarity=0.340  Sum_probs=60.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcC-CeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRG-CRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g-~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +++||.|+ |+||+.+|..|+++| .+|++.+ +.+++.++.+..      ..++....+|+.+.+  .+.+++++    
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~------~~~v~~~~vD~~d~~--al~~li~~----   68 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI------GGKVEALQVDAADVD--ALVALIKD----   68 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc------cccceeEEecccChH--HHHHHHhc----
Confidence            57899999 889999999999999 7999999 556666555443      248899999999988  77777753    


Q ss_pred             hCCCCEEEEcCCC
Q 024517           84 LGNLDAFVHCYTY   96 (266)
Q Consensus        84 ~g~id~li~~ag~   96 (266)
                         .|++||++..
T Consensus        69 ---~d~VIn~~p~   78 (389)
T COG1748          69 ---FDLVINAAPP   78 (389)
T ss_pred             ---CCEEEEeCCc
Confidence               3999999875

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=97.95  E-value=1.9e-05  Score=63.51  Aligned_cols=217  Identities=10%  Similarity=0.007  Sum_probs=131.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccC-----CCCCeEEEEEecCCCchHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLK-----GGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      .|++||||-++.=|..++.-|+..|+.|..+- |...-..  .+|...+.     ++........|++|..  .+.++++
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT--~RIeHlY~nP~~h~~~~mkLHYgDmTDss--~L~k~I~  103 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNT--ARIEHLYSNPHTHNGASMKLHYGDMTDSS--CLIKLIS  103 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccch--hhhhhhhcCchhcccceeEEeeccccchH--HHHHHHh
Confidence            46899999999999999999999999999765 3322211  12222221     2567888899999998  8888888


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc-----
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER-----  153 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~-----  153 (266)
                      .+     +++-+.|.|..+...-.|     +--+.+-++...|++.++.++-..-...  +-++-.-|+ .-+++     
T Consensus       104 ~i-----kPtEiYnLaAQSHVkvSF-----dlpeYTAeVdavGtLRlLdAi~~c~l~~--~VrfYQAst-SElyGkv~e~  170 (376)
T KOG1372|consen  104 TI-----KPTEVYNLAAQSHVKVSF-----DLPEYTAEVDAVGTLRLLDAIRACRLTE--KVRFYQAST-SELYGKVQEI  170 (376)
T ss_pred             cc-----CchhhhhhhhhcceEEEe-----ecccceeeccchhhhhHHHHHHhcCccc--ceeEEeccc-HhhcccccCC
Confidence            76     577777877653322122     1124455677788888888776652221  123333332 22222     


Q ss_pred             -----CCCCCchhhHHhHHHHHHHHHHHHHHh---CCCCcEEEEEecCcccCCCcccccccH-HHHHHHh------hccC
Q 024517          154 -----GLYPGAAAYGACAASIHQLVRTAAMEI---GKHKIRVNGIARGLHLQDEYPIAVGQE-RAVKLVR------EAAP  218 (266)
Q Consensus       154 -----~~~~~~~~y~~sK~a~~~~~~~la~e~---~~~~i~v~~v~pG~v~t~~~~~~~~~~-~~~~~~~------~~~~  218 (266)
                           .++.+..+|+++|......+-..+..|   +..||-+|.=+|.-=++-..++....- ...-..+      ....
T Consensus       171 PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a  250 (376)
T KOG1372|consen  171 PQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSA  250 (376)
T ss_pred             CcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhh
Confidence                 235678899999998877776666655   445777877777543333322211000 0000011      1222


Q ss_pred             CCCCCCChhhHHHHHHHHccC
Q 024517          219 LHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       219 ~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ...|+... |.+++++..+..
T Consensus       251 ~RDWGhA~-dYVEAMW~mLQ~  270 (376)
T KOG1372|consen  251 LRDWGHAG-DYVEAMWLMLQQ  270 (376)
T ss_pred             hcccchhH-HHHHHHHHHHhc
Confidence            33467776 888888777754

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=97.94  E-value=0.00018  Score=62.88  Aligned_cols=171  Identities=13%  Similarity=0.093  Sum_probs=95.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +-.+|+|+||+|++|+-+++.|.++|+.|..+- +.+..++... +...   -.....+..|.....  ++..-+  +..
T Consensus        78 ~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~---d~~~~~v~~~~~~~~--d~~~~~--~~~  149 (411)
T KOG1203|consen   78 KPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFV---DLGLQNVEADVVTAI--DILKKL--VEA  149 (411)
T ss_pred             CCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-cccc---ccccceeeecccccc--chhhhh--hhh
Confidence            567899999999999999999999999999887 4444444333 1101   123334444544443  222111  111


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhh
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY  162 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y  162 (266)
                      .--...+++-++|.- +...       |...-..+...+..++..++...-.     .+++.++++.+.... .+.+..+
T Consensus       150 ~~~~~~~v~~~~ggr-p~~e-------d~~~p~~VD~~g~knlvdA~~~aGv-----k~~vlv~si~~~~~~-~~~~~~~  215 (411)
T KOG1203|consen  150 VPKGVVIVIKGAGGR-PEEE-------DIVTPEKVDYEGTKNLVDACKKAGV-----KRVVLVGSIGGTKFN-QPPNILL  215 (411)
T ss_pred             ccccceeEEecccCC-CCcc-------cCCCcceecHHHHHHHHHHHHHhCC-----ceEEEEEeecCcccC-CCchhhh
Confidence            111356777777652 2211       1111223445577777777733322     489999998776553 2222222


Q ss_pred             HHhHHHHHHHH-HHHHHHhCCCCcEEEEEecCcccCCC
Q 024517          163 GACAASIHQLV-RTAAMEIGKHKIRVNGIARGLHLQDE  199 (266)
Q Consensus       163 ~~sK~a~~~~~-~~la~e~~~~~i~v~~v~pG~v~t~~  199 (266)
                      .   .++..-. +...+.+...|+.-.-|.||..+.+.
T Consensus       216 ~---~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~  250 (411)
T KOG1203|consen  216 L---NGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDT  250 (411)
T ss_pred             h---hhhhhHHHHhHHHHHHhcCCCcEEEeccccccCC
Confidence            1   1111111 23344555678888889999877643

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.92  E-value=5.9e-05  Score=56.36  Aligned_cols=75  Identities=24%  Similarity=0.393  Sum_probs=54.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCR-LVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~-v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++++++++|.|+ ||.|++++..|.+.|++ |+++. +.++.+++.+.+.     +..+.+  +++.+..     ..+  
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~-----~~~~~~--~~~~~~~-----~~~--   73 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG-----GVNIEA--IPLEDLE-----EAL--   73 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT-----GCSEEE--EEGGGHC-----HHH--
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC-----ccccce--eeHHHHH-----HHH--
Confidence            578999999998 77999999999999996 88888 5577777777762     124444  3444322     223  


Q ss_pred             HHHHhCCCCEEEEcCCC
Q 024517           80 ACQILGNLDAFVHCYTY   96 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~   96 (266)
                           ...|++|++.+.
T Consensus        74 -----~~~DivI~aT~~   85 (135)
T PF01488_consen   74 -----QEADIVINATPS   85 (135)
T ss_dssp             -----HTESEEEE-SST
T ss_pred             -----hhCCeEEEecCC
Confidence                 357999999875

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.86  E-value=0.0012  Score=51.10  Aligned_cols=150  Identities=12%  Similarity=0.109  Sum_probs=96.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      ++.|.||+|.+|..|+++..++|+.|..+. ++.+....           ..+.+++.|+.|.+  ++.+.+       -
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-----------~~~~i~q~Difd~~--~~a~~l-------~   61 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-----------QGVTILQKDIFDLT--SLASDL-------A   61 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-----------ccceeecccccChh--hhHhhh-------c
Confidence            578999999999999999999999999887 54443321           35678889999988  654444       3


Q ss_pred             CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC--------CCC
Q 024517           86 NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG--------LYP  157 (266)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~--------~~~  157 (266)
                      ..|++|...|...+.       .+  +        -.....++++..++... -.+++.++...+++-.        +..
T Consensus        62 g~DaVIsA~~~~~~~-------~~--~--------~~~k~~~~li~~l~~ag-v~RllVVGGAGSL~id~g~rLvD~p~f  123 (211)
T COG2910          62 GHDAVISAFGAGASD-------ND--E--------LHSKSIEALIEALKGAG-VPRLLVVGGAGSLEIDEGTRLVDTPDF  123 (211)
T ss_pred             CCceEEEeccCCCCC-------hh--H--------HHHHHHHHHHHHHhhcC-CeeEEEEcCccceEEcCCceeecCCCC
Confidence            789999998763211       00  0        11122556666666544 4788888877665331        111


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD  198 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~  198 (266)
                      +...|.-+++.- -+.+.|..+   +.+.-.-|+|..+..|
T Consensus       124 P~ey~~~A~~~a-e~L~~Lr~~---~~l~WTfvSPaa~f~P  160 (211)
T COG2910         124 PAEYKPEALAQA-EFLDSLRAE---KSLDWTFVSPAAFFEP  160 (211)
T ss_pred             chhHHHHHHHHH-HHHHHHhhc---cCcceEEeCcHHhcCC
Confidence            223334444333 344455554   4588888999887766

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.77  E-value=7.8e-05  Score=65.84  Aligned_cols=74  Identities=26%  Similarity=0.467  Sum_probs=54.8

Q ss_pred             EEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      |+|.|+ |.+|+.+++.|++++-  +|++.+ +.++++++.+.+.     ..++..+.+|+.|.+  ++.++++      
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~-----~~~~~~~~~d~~~~~--~l~~~~~------   66 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLL-----GDRVEAVQVDVNDPE--SLAELLR------   66 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--T-----TTTEEEEE--TTTHH--HHHHHHT------
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhcc-----ccceeEEEEecCCHH--HHHHHHh------
Confidence            689999 9999999999999974  789999 6666666665541     369999999999988  7777664      


Q ss_pred             CCCCEEEEcCCC
Q 024517           85 GNLDAFVHCYTY   96 (266)
Q Consensus        85 g~id~li~~ag~   96 (266)
                       ..|++||++|.
T Consensus        67 -~~dvVin~~gp   77 (386)
T PF03435_consen   67 -GCDVVINCAGP   77 (386)
T ss_dssp             -TSSEEEE-SSG
T ss_pred             -cCCEEEECCcc
Confidence             46999999976

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.74  E-value=0.00021  Score=56.22  Aligned_cols=77  Identities=21%  Similarity=0.358  Sum_probs=49.5

Q ss_pred             CCCcEEEEecC----------------CCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecC
Q 024517            3 NQAKRVLLTSD----------------GDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDME   66 (266)
Q Consensus         3 l~~k~vlItGa----------------~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   66 (266)
                      |+||+||||+|                ||..|.++|+++..+|++|.++..+.....         +  ..+..+.  +.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~---------p--~~~~~i~--v~   67 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPP---------P--PGVKVIR--VE   67 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTEEEEE---S
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccc---------c--ccceEEE--ec
Confidence            57999999998                477999999999999999998883322211         1  2444444  33


Q ss_pred             CCchHHHHHHHHHHHHHhCCCCEEEEcCCCC
Q 024517           67 EDREGAFDEAVDKACQILGNLDAFVHCYTYE   97 (266)
Q Consensus        67 ~~~~~~v~~~~~~~~~~~g~id~li~~ag~~   97 (266)
                           +...+.+.+.+.+..-|++|++|.+.
T Consensus        68 -----sa~em~~~~~~~~~~~Di~I~aAAVs   93 (185)
T PF04127_consen   68 -----SAEEMLEAVKELLPSADIIIMAAAVS   93 (185)
T ss_dssp             -----SHHHHHHHHHHHGGGGSEEEE-SB--
T ss_pred             -----chhhhhhhhccccCcceeEEEecchh
Confidence                 34456777766666679999999873

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.71  E-value=0.00039  Score=59.57  Aligned_cols=150  Identities=14%  Similarity=0.132  Sum_probs=86.2

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcC--CeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRG--CRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++.++++|+|++|.||..++..|+.++  ..++++|. +.++..+..+....   .  .....+.+++.  +..+.+   
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di-~~~~g~a~Dl~~~~---~--~~~v~~~td~~--~~~~~l---   74 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDI-VGAPGVAADLSHID---T--PAKVTGYADGE--LWEKAL---   74 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEec-CCCcccccchhhcC---c--CceEEEecCCC--chHHHh---
Confidence            356789999999999999999999665  47889885 23333232332211   1  23344666655  322233   


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccc---------
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGA---------  151 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~---------  151 (266)
                          ...|++|+++|.. . .+     .+++...+..|+...-    .+.+.|.+.. ..++++++|-...         
T Consensus        75 ----~gaDvVVitaG~~-~-~~-----~~tR~dll~~N~~i~~----~i~~~i~~~~-~~~iviv~SNPvdv~~~~~~~~  138 (321)
T PTZ00325         75 ----RGADLVLICAGVP-R-KP-----GMTRDDLFNTNAPIVR----DLVAAVASSA-PKAIVGIVSNPVNSTVPIAAET  138 (321)
T ss_pred             ----CCCCEEEECCCCC-C-CC-----CCCHHHHHHHHHHHHH----HHHHHHHHHC-CCeEEEEecCcHHHHHHHHHhh
Confidence                4689999999872 1 11     1235556677765554    4455555544 3345555543221         


Q ss_pred             --ccCCCCCchhhHHhHHHHH--HHHHHHHHHhC
Q 024517          152 --ERGLYPGAAAYGACAASIH--QLVRTAAMEIG  181 (266)
Q Consensus       152 --~~~~~~~~~~y~~sK~a~~--~~~~~la~e~~  181 (266)
                        ....+|....|+.+ . |.  .|-..+++.+.
T Consensus       139 ~~~~sg~p~~~viG~g-~-LDs~R~r~~la~~l~  170 (321)
T PTZ00325        139 LKKAGVYDPRKLFGVT-T-LDVVRARKFVAEALG  170 (321)
T ss_pred             hhhccCCChhheeech-h-HHHHHHHHHHHHHhC
Confidence              11124556667776 2 55  45556666653

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.70  E-value=0.00033  Score=60.29  Aligned_cols=118  Identities=16%  Similarity=0.135  Sum_probs=66.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcC-------CeEEEEeccccc---HHHHHHHhcccCCCCCeEEEEEecCCCchHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRG-------CRLVLVGNERRL---SSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDE   75 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g-------~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~   75 (266)
                      -+++||||+|.+|.+++..|+..+       ..|+++++.+..   +.....+...      ......|+....  +.  
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~------~~~~~~~~~~~~--~~--   72 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC------AFPLLKSVVATT--DP--   72 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc------cccccCCceecC--CH--
Confidence            368999999999999999999854       579999843221   1111111100      000011222222  21  


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC-CCCeEEEEeccc
Q 024517           76 AVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK-AGGSIVFLTSII  149 (266)
Q Consensus        76 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~iv~iss~~  149 (266)
                           .+.+...|++||+||....    ...+.   ...++.|    ..+++.+.+.+.+.. +++.++.+|.+.
T Consensus        73 -----~~~l~~aDiVI~tAG~~~~----~~~~R---~~l~~~N----~~i~~~i~~~i~~~~~~~~iiivvsNPv  131 (325)
T cd01336          73 -----EEAFKDVDVAILVGAMPRK----EGMER---KDLLKAN----VKIFKEQGEALDKYAKKNVKVLVVGNPA  131 (325)
T ss_pred             -----HHHhCCCCEEEEeCCcCCC----CCCCH---HHHHHHH----HHHHHHHHHHHHHhCCCCeEEEEecCcH
Confidence                 2233579999999997321    12333   3344444    446667777666652 367788888643

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.69  E-value=9.7e-05  Score=66.53  Aligned_cols=77  Identities=18%  Similarity=0.173  Sum_probs=53.0

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|+++|||+++ +|.++|+.|+++|++|++.+ +.....+..+++.+.     .+.+...  .+..  .+   .+ 
T Consensus         1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~-----g~~~~~~--~~~~--~~---~~-   66 (447)
T PRK02472          1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE-----GIKVICG--SHPL--EL---LD-   66 (447)
T ss_pred             CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc-----CCEEEeC--CCCH--HH---hc-
Confidence            889999999999987 99999999999999999998 544444444445432     2222211  1222  11   11 


Q ss_pred             HHHHhCCCCEEEEcCCC
Q 024517           80 ACQILGNLDAFVHCYTY   96 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~   96 (266)
                           ..+|.+|+++|+
T Consensus        67 -----~~~d~vV~s~gi   78 (447)
T PRK02472         67 -----EDFDLMVKNPGI   78 (447)
T ss_pred             -----CcCCEEEECCCC
Confidence                 148999999987

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.68  E-value=0.00013  Score=61.78  Aligned_cols=82  Identities=22%  Similarity=0.264  Sum_probs=67.6

Q ss_pred             EEEEecCCCchHHHHHHHHHH----cCCeEEEEe-cccccHHHHHHHhcccCC-CCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAK----RGCRLVLVG-NERRLSSVAEKMMGSLKG-GQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~----~g~~v~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      -++|.||+|..|.-+++++..    .|..+-+.+ +++++++..+.+.+..+. -.+..++.||.+|++  ++.+++++.
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~--Sl~emak~~   84 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEA--SLDEMAKQA   84 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHH--HHHHHHhhh
Confidence            489999999999999999999    677888888 888999999888766432 123348899999999  999888764


Q ss_pred             HHHhCCCCEEEEcCCCC
Q 024517           81 CQILGNLDAFVHCYTYE   97 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~   97 (266)
                             .+++||+|..
T Consensus        85 -------~vivN~vGPy   94 (423)
T KOG2733|consen   85 -------RVIVNCVGPY   94 (423)
T ss_pred             -------EEEEeccccc
Confidence                   6999999864

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.67  E-value=0.00067  Score=72.11  Aligned_cols=178  Identities=17%  Similarity=0.226  Sum_probs=111.1

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +.++.++|++.+++++.+++..|.++|+.|+++...+........+      ...+..+.+.-.+..  ++..+++.+.+
T Consensus      1753 ~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~--~~~~~~~~~~~ 1824 (2582)
T TIGR02813      1753 QSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWVVSHSASPL------ASAIASVTLGTIDDT--SIEAVIKDIEE 1824 (2582)
T ss_pred             ccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccccccccccc------ccccccccccccchH--HHHHHHHhhhc
Confidence            3477889998899999999999999999998875222111110011      122233333333333  77888888877


Q ss_pred             HhCCCCEEEEcCCCCCCC-CCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           83 ILGNLDAFVHCYTYEGKM-QDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      ..+.++.+||..+..... ......   .+...-...+...|.+.|.+.+.+...+ ++.++.++...|..+  +.....
T Consensus      1825 ~~~~~~g~i~l~~~~~~~~~~~~~~---~~~~~~~~~l~~~f~~ak~~~~~l~~~~-~~~~~~vsr~~G~~g--~~~~~~ 1898 (2582)
T TIGR02813      1825 KTAQIDGFIHLQPQHKSVADKVDAI---ELPEAAKQSLMLAFLFAKLLNVKLATNA-RASFVTVSRIDGGFG--YSNGDA 1898 (2582)
T ss_pred             cccccceEEEecccccccccccccc---ccchhhHHHHHHHHHHHHhhchhhccCC-CeEEEEEEecCCccc--cCCccc
Confidence            778899999987642110 001001   1111112334456788888777665443 578888888765444  211111


Q ss_pred             --------hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCc
Q 024517          162 --------YGACAASIHQLVRTAAMEIGKHKIRVNGIARGL  194 (266)
Q Consensus       162 --------y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~  194 (266)
                              -....+++.+|+|+++.|+..-.+|...+.|..
T Consensus      1899 ~~~~~~~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~~ 1939 (2582)
T TIGR02813      1899 DSGTQQVKAELNQAALAGLTKTLNHEWNAVFCRALDLAPKL 1939 (2582)
T ss_pred             cccccccccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCCc
Confidence                    134588999999999999987777888887753

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.62  E-value=0.0017  Score=55.66  Aligned_cols=121  Identities=17%  Similarity=0.229  Sum_probs=78.0

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAV   77 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~   77 (266)
                      |+-.++++.|+|+ |++|.+++..++.+|.  .+++.| +.+.++.....+....+-..++.     +...+       .
T Consensus         2 ~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~-----i~~~~-------~   68 (315)
T PRK00066          2 MKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTK-----IYAGD-------Y   68 (315)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeE-----EEeCC-------H
Confidence            5667889999998 8899999999999987  799999 77777777777764421111221     22111       1


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           78 DKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                      +.    +..-|++|..+|.. . .+  .++..   ..+..    ...+++.+.+.+.+...++.++++|.+.
T Consensus        69 ~~----~~~adivIitag~~-~-k~--g~~R~---dll~~----N~~i~~~i~~~i~~~~~~~~vivvsNP~  125 (315)
T PRK00066         69 SD----CKDADLVVITAGAP-Q-KP--GETRL---DLVEK----NLKIFKSIVGEVMASGFDGIFLVASNPV  125 (315)
T ss_pred             HH----hCCCCEEEEecCCC-C-CC--CCCHH---HHHHH----HHHHHHHHHHHHHHhCCCeEEEEccCcH
Confidence            11    24689999999872 2 21  23333   23333    3445566667666655468888888654

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.59  E-value=0.00025  Score=60.95  Aligned_cols=71  Identities=18%  Similarity=0.312  Sum_probs=48.8

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHc-CC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKR-GC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~-g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      ++++|+++||||+|.||+.+|++|+++ |. ++++++ +.+++.++.+++.            ..|+.     ++.    
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~------------~~~i~-----~l~----  210 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG------------GGKIL-----SLE----  210 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc------------cccHH-----hHH----
Confidence            478999999999999999999999865 64 788887 4445544443321            01111     121    


Q ss_pred             HHHHHhCCCCEEEEcCCC
Q 024517           79 KACQILGNLDAFVHCYTY   96 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~   96 (266)
                         +.+...|+++++++.
T Consensus       211 ---~~l~~aDiVv~~ts~  225 (340)
T PRK14982        211 ---EALPEADIVVWVASM  225 (340)
T ss_pred             ---HHHccCCEEEECCcC
Confidence               233568999999976

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.49  E-value=0.00017  Score=57.60  Aligned_cols=44  Identities=27%  Similarity=0.451  Sum_probs=36.4

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAE   46 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~   46 (266)
                      +++||+++|+|.+ .+|+.+++.|.+.|++|++.+ +.++.++..+
T Consensus        25 ~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~   69 (200)
T cd01075          25 SLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAE   69 (200)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            4789999999997 799999999999999999888 5554444443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.45  E-value=0.00058  Score=57.52  Aligned_cols=47  Identities=17%  Similarity=0.326  Sum_probs=38.6

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcC-CeEEEEe-cccccHHHHHHHh
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRG-CRLVLVG-NERRLSSVAEKMM   49 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g-~~v~~~~-~~~~~~~~~~~~~   49 (266)
                      ++++|+++|+|+ ||+|++++..|.++| .+|++++ +.++.+++++++.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            367899999997 899999999999999 5899998 5566666666553

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.44  E-value=0.0027  Score=53.92  Aligned_cols=79  Identities=10%  Similarity=0.168  Sum_probs=51.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++++++|+|+++++|.++++.+...|++|++++ +.++.+.. ..+      +.+   ..+|..+.+  ..+++.+... 
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~------g~~---~~~~~~~~~--~~~~~~~~~~-  210 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQA------GAD---AVFNYRAED--LADRILAATA-  210 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc------CCC---EEEeCCCcC--HHHHHHHHcC-
Confidence            578999999999999999999999999998887 44333222 221      121   124555554  4444332221 


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                       ..++|.++++++.
T Consensus       211 -~~~~d~vi~~~~~  223 (325)
T cd08253         211 -GQGVDVIIEVLAN  223 (325)
T ss_pred             -CCceEEEEECCch
Confidence             1369999999864

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.43  E-value=0.0012  Score=50.71  Aligned_cols=158  Identities=11%  Similarity=0.021  Sum_probs=95.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCC--eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGC--RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      .++.+.++|.||++-.|..+.+++.+++.  +|+++.|.+..++..         ...+.....|.+..+         +
T Consensus        15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at---------~k~v~q~~vDf~Kl~---------~   76 (238)
T KOG4039|consen   15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT---------DKVVAQVEVDFSKLS---------Q   76 (238)
T ss_pred             hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc---------cceeeeEEechHHHH---------H
Confidence            36788999999999999999999999975  898888544333321         234555666766544         2


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      ..+.+.++|+++++-|........        +..+.+.---.+.+++.+    ++.+ ...++.+||..+..    ...
T Consensus        77 ~a~~~qg~dV~FcaLgTTRgkaGa--------dgfykvDhDyvl~~A~~A----Ke~G-ck~fvLvSS~GAd~----sSr  139 (238)
T KOG4039|consen   77 LATNEQGPDVLFCALGTTRGKAGA--------DGFYKVDHDYVLQLAQAA----KEKG-CKTFVLVSSAGADP----SSR  139 (238)
T ss_pred             HHhhhcCCceEEEeeccccccccc--------CceEeechHHHHHHHHHH----HhCC-CeEEEEEeccCCCc----ccc
Confidence            233345799999997753221111        111111111223333333    2233 56888888875543    234


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCc
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY  200 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~  200 (266)
                      ..|--.|.-++.=+..|    .-  =++..+.||++..+..
T Consensus       140 FlY~k~KGEvE~~v~eL----~F--~~~~i~RPG~ll~~R~  174 (238)
T KOG4039|consen  140 FLYMKMKGEVERDVIEL----DF--KHIIILRPGPLLGERT  174 (238)
T ss_pred             eeeeeccchhhhhhhhc----cc--cEEEEecCcceecccc
Confidence            56777777666544322    21  2788899999987644

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.41  E-value=0.0045  Score=46.55  Aligned_cols=116  Identities=16%  Similarity=0.252  Sum_probs=71.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ++.|+|++|.+|.+++..|...+.  +++++| +.+.++.....++..... ......... .+.+      .+      
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~-~~~~~~i~~-~~~~------~~------   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAP-LPSPVRITS-GDYE------AL------   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHG-STEEEEEEE-SSGG------GG------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhh-ccccccccc-cccc------cc------
Confidence            588999999999999999999975  699999 666666666666533221 111111111 3322      12      


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                       ..-|++|..+|.. . .+  ..+.   ...+..|    ..+.+.+.+.+.+....+.++.+|.+
T Consensus        68 -~~aDivvitag~~-~-~~--g~sR---~~ll~~N----~~i~~~~~~~i~~~~p~~~vivvtNP  120 (141)
T PF00056_consen   68 -KDADIVVITAGVP-R-KP--GMSR---LDLLEAN----AKIVKEIAKKIAKYAPDAIVIVVTNP  120 (141)
T ss_dssp             -TTESEEEETTSTS-S-ST--TSSH---HHHHHHH----HHHHHHHHHHHHHHSTTSEEEE-SSS
T ss_pred             -ccccEEEEecccc-c-cc--cccH---HHHHHHh----HhHHHHHHHHHHHhCCccEEEEeCCc
Confidence             3679999999873 2 11  1233   3334444    45566666666655546888887764

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.35  E-value=0.00089  Score=56.17  Aligned_cols=45  Identities=20%  Similarity=0.451  Sum_probs=37.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHh
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMM   49 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~   49 (266)
                      .+|+++|+|+ +|+|++++..|++.|++|.+++ +.++.+++.+++.
T Consensus       116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~  161 (270)
T TIGR00507       116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQ  161 (270)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence            5789999999 5999999999999999999988 5566666666654

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.34  E-value=0.004  Score=53.68  Aligned_cols=76  Identities=14%  Similarity=0.252  Sum_probs=50.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      |.++||+||++|+|...++.....|++++++. +.++.+ .+.++      +....   .|..+.+      +.+++++.
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l------GAd~v---i~y~~~~------~~~~v~~~  206 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL------GADHV---INYREED------FVEQVREL  206 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc------CCCEE---EcCCccc------HHHHHHHH
Confidence            78999999999999999999999997766665 655544 44333      22211   2333333      34444443


Q ss_pred             h-C-CCCEEEEcCCC
Q 024517           84 L-G-NLDAFVHCYTY   96 (266)
Q Consensus        84 ~-g-~id~li~~ag~   96 (266)
                      . + .+|+++...|.
T Consensus       207 t~g~gvDvv~D~vG~  221 (326)
T COG0604         207 TGGKGVDVVLDTVGG  221 (326)
T ss_pred             cCCCCceEEEECCCH
Confidence            3 3 59999999986

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.33  E-value=0.0049  Score=52.67  Aligned_cols=116  Identities=17%  Similarity=0.254  Sum_probs=73.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcC--CeEEEEe-cccccHHHHHHHhcccCC-CCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRG--CRLVLVG-NERRLSSVAEKMMGSLKG-GQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g--~~v~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++.|.|+ |++|..++..|+.+|  .++++++ +.++.+.....+...... .....+..   .+.+         .  
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~---------~--   65 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYS---------D--   65 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHH---------H--
Confidence            36788886 789999999999999  4799999 777777777776543210 11222211   1111         1  


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                        ....|++|+++|..  ..+  .++..+   .++    ....+++...+.+.+....+.++++|.+.
T Consensus        66 --l~~aDIVIitag~~--~~~--g~~R~d---ll~----~N~~i~~~~~~~i~~~~~~~~vivvsNP~  120 (306)
T cd05291          66 --CKDADIVVITAGAP--QKP--GETRLD---LLE----KNAKIMKSIVPKIKASGFDGIFLVASNPV  120 (306)
T ss_pred             --hCCCCEEEEccCCC--CCC--CCCHHH---HHH----HHHHHHHHHHHHHHHhCCCeEEEEecChH
Confidence              14689999999872  121  233322   233    34556677777777665568888888754

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.33  E-value=0.00094  Score=50.87  Aligned_cols=73  Identities=18%  Similarity=0.310  Sum_probs=50.9

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcC-CeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRG-CRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g-~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++++++|+|+ +++|+++++.|.+.| ..|++++ +.++.++..+++...        .+..+.++.+  +   +    
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~--------~~~~~~~~~~--~---~----   78 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL--------GIAIAYLDLE--E---L----   78 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc--------ccceeecchh--h---c----
Confidence            46789999998 789999999999996 6888888 556666655554321        1223344333  2   1    


Q ss_pred             HHHhCCCCEEEEcCCC
Q 024517           81 CQILGNLDAFVHCYTY   96 (266)
Q Consensus        81 ~~~~g~id~li~~ag~   96 (266)
                         ....|++|++.+.
T Consensus        79 ---~~~~Dvvi~~~~~   91 (155)
T cd01065          79 ---LAEADLIINTTPV   91 (155)
T ss_pred             ---cccCCEEEeCcCC
Confidence               2468999999875

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK06849 hypothetical protein; Provisional

Probab=97.33  E-value=0.0015  Score=57.70  Aligned_cols=82  Identities=17%  Similarity=0.161  Sum_probs=50.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +.++|||||++..+|..+++.|.++|++|++++ +..........+       .....+...-.+.+  ...+.+.++.+
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~-------d~~~~~p~p~~d~~--~~~~~L~~i~~   73 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV-------DGFYTIPSPRWDPD--AYIQALLSIVQ   73 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh-------hheEEeCCCCCCHH--HHHHHHHHHHH
Confidence            578999999999999999999999999999998 432222111111       12222211222222  33333334444


Q ss_pred             HhCCCCEEEEcCC
Q 024517           83 ILGNLDAFVHCYT   95 (266)
Q Consensus        83 ~~g~id~li~~ag   95 (266)
                      +. ++|++|....
T Consensus        74 ~~-~id~vIP~~e   85 (389)
T PRK06849         74 RE-NIDLLIPTCE   85 (389)
T ss_pred             Hc-CCCEEEECCh
Confidence            43 5999998764

>cd00704 MDH Malate dehydrogenase

Probab=97.29  E-value=0.0054  Score=52.77  Aligned_cols=118  Identities=14%  Similarity=0.200  Sum_probs=69.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-------eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHH--HHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC-------RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFD--EAV   77 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~-------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~--~~~   77 (266)
                      ++.|+||+|.+|..++..|+.+|.       .+++.|..+.. +             .......|+.+..-....  .+-
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-~-------------~~~g~~~Dl~d~~~~~~~~~~i~   67 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-K-------------ALEGVVMELQDCAFPLLKGVVIT   67 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-C-------------ccceeeeehhhhcccccCCcEEe
Confidence            589999999999999999998764       38888833211 0             122334455543100000  000


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhcc-CCCCeEEEEeccc
Q 024517           78 DKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES-KAGGSIVFLTSII  149 (266)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~g~iv~iss~~  149 (266)
                      ....+.+...|++|+.||.. . .+  ..+.   ...+.    ....+++.+.+.+.+. ++.+.++.+|.+.
T Consensus        68 ~~~~~~~~~aDiVVitAG~~-~-~~--g~tR---~dll~----~N~~i~~~i~~~i~~~~~~~~iiivvsNPv  129 (323)
T cd00704          68 TDPEEAFKDVDVAILVGAFP-R-KP--GMER---ADLLR----KNAKIFKEQGEALNKVAKPTVKVLVVGNPA  129 (323)
T ss_pred             cChHHHhCCCCEEEEeCCCC-C-Cc--CCcH---HHHHH----HhHHHHHHHHHHHHHhCCCCeEEEEeCCcH
Confidence            11223446799999999972 1 21  2333   23333    3455777778877776 3468888887643

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.22  E-value=0.012  Score=50.71  Aligned_cols=156  Identities=12%  Similarity=0.107  Sum_probs=97.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCC-------eEEEEe-cccc--cHHHHHHHhccc-CCCCCeEEEEEecCCCchHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGC-------RLVLVG-NERR--LSSVAEKMMGSL-KGGQPVEVVGLDMEEDREGAF   73 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~-------~v~~~~-~~~~--~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~v   73 (266)
                      -+++.|+|++|.+|..++..++.+|.       .+++.| +...  ++..+..+.... +-..++.     ++. +  . 
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-----i~~-~--~-   72 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIV-----ITD-D--P-   72 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceE-----Eec-C--c-
Confidence            35789999999999999999998876       688998 4322  333333333221 0000111     111 1  1 


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC-CCCeEEEEeccccc-
Q 024517           74 DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK-AGGSIVFLTSIIGA-  151 (266)
Q Consensus        74 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~iv~iss~~~~-  151 (266)
                             -+.+..-|++|.+||.. . .+  ..+..+   .+..    ...+++.+.+.+.+.. +.+.++.+|.+.-. 
T Consensus        73 -------~~~~~daDivvitaG~~-~-k~--g~tR~d---ll~~----N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~  134 (322)
T cd01338          73 -------NVAFKDADWALLVGAKP-R-GP--GMERAD---LLKA----NGKIFTAQGKALNDVASRDVKVLVVGNPCNTN  134 (322)
T ss_pred             -------HHHhCCCCEEEEeCCCC-C-CC--CCcHHH---HHHH----HHHHHHHHHHHHHhhCCCCeEEEEecCcHHHH
Confidence                   11224689999999872 2 21  233322   3333    4557777788777765 36888888865422 


Q ss_pred             ------ccCCCCCchhhHHhHHHHHHHHHHHHHHhCC--CCcEE
Q 024517          152 ------ERGLYPGAAAYGACAASIHQLVRTAAMEIGK--HKIRV  187 (266)
Q Consensus       152 ------~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~--~~i~v  187 (266)
                            ..+.+|....|+.++.--..|...+++.++-  ..|+.
T Consensus       135 t~~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~  178 (322)
T cd01338         135 ALIAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKN  178 (322)
T ss_pred             HHHHHHHcCCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEE
Confidence                  1112677778999998999999999998764  34564

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.18  E-value=0.0054  Score=52.57  Aligned_cols=79  Identities=14%  Similarity=0.200  Sum_probs=52.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .+++++|+|+++++|.++++.+...|++|++++ +.++.+.+ ..+      +..   ...|..+.+  ....+.+... 
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~------~~~---~~~~~~~~~--~~~~~~~~~~-  232 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KEL------GAD---YVIDYRKED--FVREVRELTG-  232 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc------CCC---eEEecCChH--HHHHHHHHhC-
Confidence            578999999999999999999999999998887 44333322 221      111   123555544  4444433222 


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                       .+.+|++++++|.
T Consensus       233 -~~~~d~~i~~~g~  245 (342)
T cd08266         233 -KRGVDVVVEHVGA  245 (342)
T ss_pred             -CCCCcEEEECCcH
Confidence             1369999999873

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.11  E-value=0.0083  Score=54.58  Aligned_cols=112  Identities=21%  Similarity=0.201  Sum_probs=67.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCc-----------hH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDR-----------EG   71 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----------~~   71 (266)
                      .+.+|+|+|++. +|...+..+...|+.|+++| ++++++ ..+++        ...++..|..+.+           ++
T Consensus       164 pg~kVlViGaG~-iGL~Ai~~Ak~lGA~V~a~D~~~~rle-~aesl--------GA~~v~i~~~e~~~~~~gya~~~s~~  233 (509)
T PRK09424        164 PPAKVLVIGAGV-AGLAAIGAAGSLGAIVRAFDTRPEVAE-QVESM--------GAEFLELDFEEEGGSGDGYAKVMSEE  233 (509)
T ss_pred             CCCEEEEECCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHc--------CCeEEEeccccccccccchhhhcchh
Confidence            578999999876 99999999999999999999 655544 33333        2233333433211           00


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           72 AFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        72 ~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                      ..++..+...+..+..|++|.+++..+..                    ++..+.+..+..|+.   +|.|+.++..
T Consensus       234 ~~~~~~~~~~~~~~gaDVVIetag~pg~~--------------------aP~lit~~~v~~mkp---GgvIVdvg~~  287 (509)
T PRK09424        234 FIKAEMALFAEQAKEVDIIITTALIPGKP--------------------APKLITAEMVASMKP---GSVIVDLAAE  287 (509)
T ss_pred             HHHHHHHHHHhccCCCCEEEECCCCCccc--------------------CcchHHHHHHHhcCC---CCEEEEEccC
Confidence            11111111122225699999999873211                    233334666777764   6788888763

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.04  E-value=0.0096  Score=51.25  Aligned_cols=116  Identities=16%  Similarity=0.196  Sum_probs=70.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-------eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHH--HHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC-------RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFD--EAV   77 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~-------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~--~~~   77 (266)
                      ++.|+|++|.+|..++..|..++.       .+++.|..+..+              .......|+.+..  ...  ...
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~--------------~a~g~~~Dl~d~~--~~~~~~~~   64 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK--------------VLEGVVMELMDCA--FPLLDGVV   64 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc--------------ccceeEeehhccc--chhcCcee
Confidence            478999999999999999998654       488888332211              1234445666544  111  000


Q ss_pred             --HHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhcc-CCCCeEEEEeccc
Q 024517           78 --DKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES-KAGGSIVFLTSII  149 (266)
Q Consensus        78 --~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~g~iv~iss~~  149 (266)
                        ....+.+...|++|+.||.. . .+  ..   ++...+..|    ..+++.+.+.+.+. .+.+.++.+|.+.
T Consensus        65 ~~~~~~~~~~~aDiVVitAG~~-~-~~--~~---tr~~ll~~N----~~i~k~i~~~i~~~~~~~~iiivvsNPv  128 (324)
T TIGR01758        65 PTHDPAVAFTDVDVAILVGAFP-R-KE--GM---ERRDLLSKN----VKIFKEQGRALDKLAKKDCKVLVVGNPA  128 (324)
T ss_pred             ccCChHHHhCCCCEEEEcCCCC-C-CC--CC---cHHHHHHHH----HHHHHHHHHHHHhhCCCCeEEEEeCCcH
Confidence              01123446799999999872 2 11  12   234444444    45677777777766 3468888887643

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK05086 malate dehydrogenase; Provisional

Probab=97.00  E-value=0.0092  Score=51.12  Aligned_cols=118  Identities=14%  Similarity=0.113  Sum_probs=62.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHH-c--CCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAK-R--GCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~-~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++++|+||+|+||.+++..+.. .  +..+++.++.+..+.....+...    .....+..  .+.+  ++.+.+     
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~----~~~~~i~~--~~~~--d~~~~l-----   67 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHI----PTAVKIKG--FSGE--DPTPAL-----   67 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcC----CCCceEEE--eCCC--CHHHHc-----
Confidence            4689999999999999998865 2  34677777433322111122110    11111121  1122  221222     


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                        ...|++|.++|.. . .+  ..+   -...+..|.    .+++.+.+.|.+...++.++.+|.+.
T Consensus        68 --~~~DiVIitaG~~-~-~~--~~~---R~dll~~N~----~i~~~ii~~i~~~~~~~ivivvsNP~  121 (312)
T PRK05086         68 --EGADVVLISAGVA-R-KP--GMD---RSDLFNVNA----GIVKNLVEKVAKTCPKACIGIITNPV  121 (312)
T ss_pred             --CCCCEEEEcCCCC-C-CC--CCC---HHHHHHHHH----HHHHHHHHHHHHhCCCeEEEEccCch
Confidence              3699999999973 2 11  122   233344444    35555566666554356666666654

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.98  E-value=0.012  Score=49.03  Aligned_cols=33  Identities=18%  Similarity=0.235  Sum_probs=28.5

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG   36 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~   36 (266)
                      |++++|+|.|++ |+|..+|+.|+..|. ++.++|
T Consensus        28 L~~s~VlVvG~G-GVGs~vae~Lar~GVg~itLiD   61 (268)
T PRK15116         28 FADAHICVVGIG-GVGSWAAEALARTGIGAITLID   61 (268)
T ss_pred             hcCCCEEEECcC-HHHHHHHHHHHHcCCCEEEEEe
Confidence            577889999876 599999999999995 788887

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.97  E-value=0.016  Score=47.30  Aligned_cols=148  Identities=17%  Similarity=0.108  Sum_probs=81.6

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-ccc-------------------ccHHHHHHHhcccCCCCCeEEE
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NER-------------------RLSSVAEKMMGSLKGGQPVEVV   61 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~-------------------~~~~~~~~~~~~~~~~~~~~~~   61 (266)
                      |++++|+|.|.+ |+|..+++.|++.|. +++++| +.-                   +.+...+++.+..+ ..++..+
T Consensus         9 L~~~~VlVvG~G-GvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP-~~~V~~~   86 (231)
T cd00755           9 LRNAHVAVVGLG-GVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINP-ECEVDAV   86 (231)
T ss_pred             HhCCCEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCC-CcEEEEe
Confidence            567889999876 599999999999998 788887 321                   22333444444433 2444444


Q ss_pred             EEecCCCchHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCe
Q 024517           62 GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGS  141 (266)
Q Consensus        62 ~~D~~~~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~  141 (266)
                      ...++. +  ....++      ..++|++|.+....                      ..-..+.+.+...      +-.
T Consensus        87 ~~~i~~-~--~~~~l~------~~~~D~VvdaiD~~----------------------~~k~~L~~~c~~~------~ip  129 (231)
T cd00755          87 EEFLTP-D--NSEDLL------GGDPDFVVDAIDSI----------------------RAKVALIAYCRKR------KIP  129 (231)
T ss_pred             eeecCH-h--HHHHHh------cCCCCEEEEcCCCH----------------------HHHHHHHHHHHHh------CCC
Confidence            444442 2  222222      13477777775321                      1122233333221      123


Q ss_pred             EEEEecccccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcE--EEEEe
Q 024517          142 IVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIR--VNGIA  191 (266)
Q Consensus       142 iv~iss~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~--v~~v~  191 (266)
                      +|...+..+...  ......-..+|.-...|++.++++|...|++  +.+|.
T Consensus       130 ~I~s~g~g~~~d--p~~i~i~di~~t~~~pla~~~R~~Lrk~~~~~~~~~v~  179 (231)
T cd00755         130 VISSMGAGGKLD--PTRIRVADISKTSGDPLARKVRKRLRKRGIFFGVPVVY  179 (231)
T ss_pred             EEEEeCCcCCCC--CCeEEEccEeccccCcHHHHHHHHHHHcCCCCCeEEEe
Confidence            333333222111  0122334556777788999999999888875  54444

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.90  E-value=0.0066  Score=52.73  Aligned_cols=79  Identities=14%  Similarity=0.164  Sum_probs=51.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +|+.+||.||++|+|.+.++-....|+..+++...++..++.+.+-.         -...|..+++   +.+.++...  
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGA---------d~vvdy~~~~---~~e~~kk~~--  222 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGA---------DEVVDYKDEN---VVELIKKYT--  222 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCC---------cEeecCCCHH---HHHHHHhhc--
Confidence            57899999999999999999988989544444433333445555421         2234666644   333333322  


Q ss_pred             hCCCCEEEEcCCC
Q 024517           84 LGNLDAFVHCYTY   96 (266)
Q Consensus        84 ~g~id~li~~ag~   96 (266)
                      .+++|+++.|+|.
T Consensus       223 ~~~~DvVlD~vg~  235 (347)
T KOG1198|consen  223 GKGVDVVLDCVGG  235 (347)
T ss_pred             CCCccEEEECCCC
Confidence            4689999999986

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.88  E-value=0.0016  Score=42.63  Aligned_cols=30  Identities=23%  Similarity=0.258  Sum_probs=22.9

Q ss_pred             cEEEEecCCCchHHH--HHHHHHHcCCeEEEEe
Q 024517            6 KRVLLTSDGDEISKN--IAFHLAKRGCRLVLVG   36 (266)
Q Consensus         6 k~vlItGa~~giG~~--ia~~l~~~g~~v~~~~   36 (266)
                      |+|||+|+|+|.|.+  |+..| ..|++.+.++
T Consensus        40 K~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~   71 (78)
T PF12242_consen   40 KKVLVIGASTGYGLASRIAAAF-GAGADTIGVS   71 (78)
T ss_dssp             SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE
T ss_pred             ceEEEEecCCcccHHHHHHHHh-cCCCCEEEEe
Confidence            899999999999999  66666 6688888776

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.88  E-value=0.0052  Score=55.26  Aligned_cols=75  Identities=20%  Similarity=0.210  Sum_probs=54.0

Q ss_pred             CCCcEEEEecC----------------CCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecC
Q 024517            3 NQAKRVLLTSD----------------GDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDME   66 (266)
Q Consensus         3 l~~k~vlItGa----------------~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   66 (266)
                      |+||++|||+|                ||-.|.++|+++..+|++|.++.-+..+.         .+  ..+.++.+   
T Consensus       254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~~---------~p--~~v~~i~V---  319 (475)
T PRK13982        254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDLA---------DP--QGVKVIHV---  319 (475)
T ss_pred             cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCCC---------CC--CCceEEEe---
Confidence            78999999998                46799999999999999999887222111         11  24455443   


Q ss_pred             CCchHHHHHHHHHHHHHhCCCCEEEEcCCC
Q 024517           67 EDREGAFDEAVDKACQILGNLDAFVHCYTY   96 (266)
Q Consensus        67 ~~~~~~v~~~~~~~~~~~g~id~li~~ag~   96 (266)
                        +  +.+++.+.+.+.+. .|++|++|.+
T Consensus       320 --~--ta~eM~~av~~~~~-~Di~I~aAAV  344 (475)
T PRK13982        320 --E--SARQMLAAVEAALP-ADIAIFAAAV  344 (475)
T ss_pred             --c--CHHHHHHHHHhhCC-CCEEEEeccc
Confidence              2  44556666666654 7999999987

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.88  E-value=0.0064  Score=52.66  Aligned_cols=81  Identities=16%  Similarity=0.204  Sum_probs=54.8

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cc---------------------cccHHHHHHHhcccCCCCCeE
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NE---------------------RRLSSVAEKMMGSLKGGQPVE   59 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~---------------------~~~~~~~~~~~~~~~~~~~~~   59 (266)
                      |++++|+|.|+ ||+|..+++.|+..|. ++.++| +.                     .+.+...+.+++..+ ..++.
T Consensus        22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp-~v~i~   99 (338)
T PRK12475         22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINS-EVEIV   99 (338)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCC-CcEEE
Confidence            67889999997 5599999999999998 788888 42                     133444456655544 35666


Q ss_pred             EEEEecCCCchHHHHHHHHHHHHHhCCCCEEEEcCC
Q 024517           60 VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYT   95 (266)
Q Consensus        60 ~~~~D~~~~~~~~v~~~~~~~~~~~g~id~li~~ag   95 (266)
                      .+..|++. +  .+++++       .+.|++|.+..
T Consensus       100 ~~~~~~~~-~--~~~~~~-------~~~DlVid~~D  125 (338)
T PRK12475        100 PVVTDVTV-E--ELEELV-------KEVDLIIDATD  125 (338)
T ss_pred             EEeccCCH-H--HHHHHh-------cCCCEEEEcCC
Confidence            66666653 2  333332       45788888863

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.87  E-value=0.021  Score=47.14  Aligned_cols=102  Identities=21%  Similarity=0.287  Sum_probs=64.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++.+++|+|+++ +|.++++.+...|.+|+.++ ++++.+ ..+.+      +.. .  ..|..+.+  ....+.   ..
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~~------g~~-~--~~~~~~~~--~~~~~~---~~  197 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLE-LAKEL------GAD-H--VIDYKEED--LEEELR---LT  197 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHH-HHHHh------CCc-e--eccCCcCC--HHHHHH---Hh
Confidence            578999999999 99999999999999999888 433322 22222      111 1  13444444  333333   22


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                      ..+.+|+++++++..                          ...+...+.+..   +|+++.++....
T Consensus       198 ~~~~~d~vi~~~~~~--------------------------~~~~~~~~~l~~---~G~~v~~~~~~~  236 (271)
T cd05188         198 GGGGADVVIDAVGGP--------------------------ETLAQALRLLRP---GGRIVVVGGTSG  236 (271)
T ss_pred             cCCCCCEEEECCCCH--------------------------HHHHHHHHhccc---CCEEEEEccCCC
Confidence            235799999998641                          123444455543   689999887543

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.86  E-value=0.0018  Score=59.50  Aligned_cols=45  Identities=18%  Similarity=0.334  Sum_probs=36.6

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKM   48 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~   48 (266)
                      +++|+++|+|+ +|+|++++..|+++|++|++++ +.++.+++.+++
T Consensus       377 ~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        377 LAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            56899999999 5999999999999999999888 445555554443

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.84  E-value=0.0082  Score=52.69  Aligned_cols=75  Identities=13%  Similarity=0.170  Sum_probs=48.8

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++++++|.|+ |.+|+.+++.+...|++|++++ +.++.+......    .  .   .+..+..+.+  .+.+.+    
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~----g--~---~v~~~~~~~~--~l~~~l----  228 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF----G--G---RIHTRYSNAY--EIEDAV----  228 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc----C--c---eeEeccCCHH--HHHHHH----
Confidence            45677899987 6799999999999999999988 544444333222    1  1   1223334333  333332    


Q ss_pred             HHhCCCCEEEEcCCC
Q 024517           82 QILGNLDAFVHCYTY   96 (266)
Q Consensus        82 ~~~g~id~li~~ag~   96 (266)
                         ...|++|++++.
T Consensus       229 ---~~aDvVI~a~~~  240 (370)
T TIGR00518       229 ---KRADLLIGAVLI  240 (370)
T ss_pred             ---ccCCEEEEcccc
Confidence               457999999865

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.83  E-value=0.12  Score=43.20  Aligned_cols=233  Identities=12%  Similarity=0.057  Sum_probs=123.1

Q ss_pred             CcEEEEecCCCchHHHH--HHHHHHcCCeEEEEe--ccccc-----------HHHHHHHhcccCCCCCeEEEEEecCCCc
Q 024517            5 AKRVLLTSDGDEISKNI--AFHLAKRGCRLVLVG--NERRL-----------SSVAEKMMGSLKGGQPVEVVGLDMEEDR   69 (266)
Q Consensus         5 ~k~vlItGa~~giG~~i--a~~l~~~g~~v~~~~--~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~D~~~~~   69 (266)
                      .|+|||.|+++|-|.+.  +..|. .|++.+.+.  ++..-           ....+....   .|.-.+-+..|.-+.+
T Consensus        41 PKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~---kGlyAksingDaFS~e  116 (398)
T COG3007          41 PKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQ---KGLYAKSINGDAFSDE  116 (398)
T ss_pred             CceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHh---cCceeeecccchhhHH
Confidence            47899999999988764  44444 467776554  32110           111111111   1455666667777666


Q ss_pred             hHHHHHHHHHHHHHhCCCCEEEEcCCCC-CCC-----------CCC---------------------CCCCHHHHHHHHH
Q 024517           70 EGAFDEAVDKACQILGNLDAFVHCYTYE-GKM-----------QDP---------------------LQVGEDEFKKLVK  116 (266)
Q Consensus        70 ~~~v~~~~~~~~~~~g~id~li~~ag~~-~~~-----------~~~---------------------~~~~~~~~~~~~~  116 (266)
                        --++.++.+++.||++|.+|++-... ...           +|+                     ...+.++++.+..
T Consensus       117 --~k~kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~  194 (398)
T COG3007         117 --MKQKVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVA  194 (398)
T ss_pred             --HHHHHHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHH
Confidence              66788888999999999999974320 000           011                     1113333443333


Q ss_pred             ccchHHH-HHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcc
Q 024517          117 INFVAPW-FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH  195 (266)
Q Consensus       117 ~n~~~~~-~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v  195 (266)
                      +.=---| ..+.+++..-.-.. +.+-+-.|=+......+.-....-+.+|.=|+.-++.+...|+..+-+.++...=.+
T Consensus       195 VMGGeDWq~WidaLl~advlae-g~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG~A~vsVlKav  273 (398)
T COG3007         195 VMGGEDWQMWIDALLEADVLAE-GAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALGGGARVSVLKAV  273 (398)
T ss_pred             hhCcchHHHHHHHHHhcccccc-CceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHhcCCCeeeeehHHH
Confidence            2211111 13333333211111 334444443333233223456778999999999999999998877555554433334


Q ss_pred             cCCCccccccc----HHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCcccccEEEEcC
Q 024517          196 LQDEYPIAVGQ----ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG  253 (266)
Q Consensus       196 ~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg  253 (266)
                      -|......+..    .-..+.++++      ++-+ -|.+.+..|.++.  --.|+.+.+|-
T Consensus       274 VTqASsaIP~~plYla~lfkvMKek------g~HE-gcIeQi~rlfse~--ly~g~~~~~D~  326 (398)
T COG3007         274 VTQASSAIPMMPLYLAILFKVMKEK------GTHE-GCIEQIDRLFSEK--LYSGSKIQLDD  326 (398)
T ss_pred             HhhhhhccccccHHHHHHHHHHHHc------Ccch-hHHHHHHHHHHHH--hhCCCCCCcCc
Confidence            44222111111    1112222222      3444 7888888888753  23377776764

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.78  E-value=0.026  Score=47.12  Aligned_cols=117  Identities=18%  Similarity=0.262  Sum_probs=73.0

Q ss_pred             EEEecCCCchHHHHHHHHHHcC----CeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            8 VLLTSDGDEISKNIAFHLAKRG----CRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g----~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +.|+|++|.+|..++..|+..|    .++++.| ++++++.....++.....    . ....++-.+  +....+     
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~----~-~~~~i~~~~--d~~~~~-----   68 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEP----L-ADIKVSITD--DPYEAF-----   68 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhh----c-cCcEEEECC--chHHHh-----
Confidence            4689998889999999999999    6899999 777887777777544211    1 111222122  211222     


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                        ..-|++|..+|.....    ..+..   ..+    ....-+.+.+.+.+.+..+++.++++|.+.
T Consensus        69 --~~aDiVv~t~~~~~~~----g~~r~---~~~----~~n~~i~~~i~~~i~~~~p~a~~i~~tNP~  122 (263)
T cd00650          69 --KDADVVIITAGVGRKP----GMGRL---DLL----KRNVPIVKEIGDNIEKYSPDAWIIVVSNPV  122 (263)
T ss_pred             --CCCCEEEECCCCCCCc----CCCHH---HHH----HHHHHHHHHHHHHHHHHCCCeEEEEecCcH
Confidence              4689999999873221    12221   111    234456667777776655568888887654

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.76  E-value=0.0057  Score=51.63  Aligned_cols=45  Identities=20%  Similarity=0.276  Sum_probs=36.5

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKM   48 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~   48 (266)
                      +++|+++|.|+ ||.+++++..|.+.|+ +|.++. +.++.+++++++
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~  169 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLG  169 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh
Confidence            57889999987 6699999999999998 688888 556666666655

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.75  E-value=0.046  Score=46.85  Aligned_cols=119  Identities=12%  Similarity=0.129  Sum_probs=74.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ..++.|+|+ |.+|..+|..++..|.  .++++| +.+.++.....++...+-.....+..  ..+.+         .  
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~--~~dy~---------~--   68 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA--DKDYS---------V--   68 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE--CCCHH---------H--
Confidence            457899996 9999999999998875  689999 77766666666654321000111111  11211         1  


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                        +..-|++|.+||.. . .+  .++..+   .+.    ...-+++.+.+.+.+...++.++++|....
T Consensus        69 --~~~adivvitaG~~-~-k~--g~~R~d---ll~----~N~~i~~~~~~~i~~~~p~~~vivvsNP~d  124 (312)
T cd05293          69 --TANSKVVIVTAGAR-Q-NE--GESRLD---LVQ----RNVDIFKGIIPKLVKYSPNAILLVVSNPVD  124 (312)
T ss_pred             --hCCCCEEEECCCCC-C-CC--CCCHHH---HHH----HHHHHHHHHHHHHHHhCCCcEEEEccChHH
Confidence              24679999999873 2 22  244433   233    344566777777766655788998887543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02602 lactate dehydrogenase

Probab=96.73  E-value=0.047  Score=47.51  Aligned_cols=117  Identities=9%  Similarity=0.062  Sum_probs=73.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +++.|+|+ |.+|.++|..++..+.  .++++| +.+.++..+..+.....-....     .+....  +    .+.   
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-----~i~~~~--d----y~~---  102 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-----KILAST--D----YAV---  102 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-----EEEeCC--C----HHH---
Confidence            68999996 8899999999998875  689999 7777777666665432100111     222111  1    111   


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                       +..-|++|-.||.. . .+  .++..+   .+.    ...-+++.+.+.+.+...++.++++|...
T Consensus       103 -~~daDiVVitAG~~-~-k~--g~tR~d---ll~----~N~~I~~~i~~~I~~~~p~~ivivvtNPv  157 (350)
T PLN02602        103 -TAGSDLCIVTAGAR-Q-IP--GESRLN---LLQ----RNVALFRKIIPELAKYSPDTILLIVSNPV  157 (350)
T ss_pred             -hCCCCEEEECCCCC-C-Cc--CCCHHH---HHH----HHHHHHHHHHHHHHHHCCCeEEEEecCch
Confidence             24679999999973 2 21  234332   222    34556777777776665578888888754

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.72  E-value=0.0049  Score=51.14  Aligned_cols=73  Identities=16%  Similarity=0.184  Sum_probs=48.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      +++|+|||+- |+.++.+|.++|++|+.+.+.+...+....        .....+..+..+.+  +..+++.+     .+
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~--------~g~~~v~~g~l~~~--~l~~~l~~-----~~   65 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI--------HQALTVHTGALDPQ--ELREFLKR-----HS   65 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc--------cCCceEEECCCCHH--HHHHHHHh-----cC
Confidence            6899999997 999999999999999987733322222111        11223445555555  55445433     47


Q ss_pred             CCEEEEcCC
Q 024517           87 LDAFVHCYT   95 (266)
Q Consensus        87 id~li~~ag   95 (266)
                      +|++|+.+.
T Consensus        66 i~~VIDAtH   74 (256)
T TIGR00715        66 IDILVDATH   74 (256)
T ss_pred             CCEEEEcCC
Confidence            999999874

This enzyme was found to be a monomer by gel filtration.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.70  E-value=0.01  Score=47.54  Aligned_cols=81  Identities=17%  Similarity=0.297  Sum_probs=51.9

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cc-------------------cccHHHHHHHhcccCCCCCeEEE
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NE-------------------RRLSSVAEKMMGSLKGGQPVEVV   61 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~-------------------~~~~~~~~~~~~~~~~~~~~~~~   61 (266)
                      +++++|+|.|.+ |+|..+++.|+..|. ++.++| +.                   .+.+...+++++..+ ..++..+
T Consensus        19 l~~~~VlviG~G-glGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~v~i~~~   96 (202)
T TIGR02356        19 LLNSHVLIIGAG-GLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNS-DIQVTAL   96 (202)
T ss_pred             hcCCCEEEECCC-HHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCC-CCEEEEe
Confidence            678889999855 699999999999998 888888 41                   233444555555433 2444444


Q ss_pred             EEecCCCchHHHHHHHHHHHHHhCCCCEEEEcCC
Q 024517           62 GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYT   95 (266)
Q Consensus        62 ~~D~~~~~~~~v~~~~~~~~~~~g~id~li~~ag   95 (266)
                      ..+++. +  .+.++       +.+.|++|.+..
T Consensus        97 ~~~i~~-~--~~~~~-------~~~~D~Vi~~~d  120 (202)
T TIGR02356        97 KERVTA-E--NLELL-------INNVDLVLDCTD  120 (202)
T ss_pred             hhcCCH-H--HHHHH-------HhCCCEEEECCC
Confidence            444432 1  22222       346899888863

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.68  E-value=0.042  Score=46.11  Aligned_cols=104  Identities=16%  Similarity=0.247  Sum_probs=68.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|.+++|++|++.+|.-+.+----.|++|+.+. ..++.+-+.+++-      ..   ...|-...+   ..+.+   .+
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lG------fD---~~idyk~~d---~~~~L---~~  214 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELG------FD---AGIDYKAED---FAQAL---KE  214 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcC------Cc---eeeecCccc---HHHHH---HH
Confidence            589999999999999877776667799999887 7666555544431      11   123444444   22333   33


Q ss_pred             Hh-CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccc
Q 024517           83 IL-GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAE  152 (266)
Q Consensus        83 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~  152 (266)
                      .. ..||+.+-|.|..                           .+.+.++.|..   .++|+...-++...
T Consensus       215 a~P~GIDvyfeNVGg~---------------------------v~DAv~~~ln~---~aRi~~CG~IS~YN  255 (340)
T COG2130         215 ACPKGIDVYFENVGGE---------------------------VLDAVLPLLNL---FARIPVCGAISQYN  255 (340)
T ss_pred             HCCCCeEEEEEcCCch---------------------------HHHHHHHhhcc---ccceeeeeehhhcC
Confidence            23 4699999999872                           23456677765   57888877665543

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.65  E-value=0.0092  Score=51.25  Aligned_cols=79  Identities=14%  Similarity=0.328  Sum_probs=49.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|.++||+|+++++|..+++.....|++|+.+. +.++. +...++      +.+.   ..|..+.+  ...+.+.... 
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~-~~~~~l------Ga~~---vi~~~~~~--~~~~~~~~~~-  204 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKV-AYLKKL------GFDV---AFNYKTVK--SLEETLKKAS-  204 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHc------CCCE---EEeccccc--cHHHHHHHhC-
Confidence            578999999999999999988888899998877 43333 222332      2221   12333332  3333333332 


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                       -+++|+++.+.|.
T Consensus       205 -~~gvdvv~d~~G~  217 (325)
T TIGR02825       205 -PDGYDCYFDNVGG  217 (325)
T ss_pred             -CCCeEEEEECCCH
Confidence             1369999998864

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.64  E-value=0.025  Score=48.37  Aligned_cols=117  Identities=15%  Similarity=0.248  Sum_probs=66.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEec-c--cccHHHHHHHhcccCC-CCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC--RLVLVGN-E--RRLSSVAEKMMGSLKG-GQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~--~v~~~~~-~--~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++.|+|++|.+|..++..++..|.  .|+++++ .  ++++.....+...... +...     +++...  +    .+. 
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~-----~i~~~~--d----~~~-   69 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA-----EIKISS--D----LSD-   69 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc-----EEEECC--C----HHH-
Confidence            689999999999999999999986  4888884 3  3333333333221110 0111     121111  1    111 


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                         +..-|++|.++|.. . .  ...+.   ...++.|+    .+++.+.+.+.+....+.++.++++.
T Consensus        70 ---l~~aDiViitag~p-~-~--~~~~r---~dl~~~n~----~i~~~~~~~i~~~~~~~~viv~~npv  124 (309)
T cd05294          70 ---VAGSDIVIITAGVP-R-K--EGMSR---LDLAKKNA----KIVKKYAKQIAEFAPDTKILVVTNPV  124 (309)
T ss_pred             ---hCCCCEEEEecCCC-C-C--CCCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEeCCch
Confidence               24789999999872 2 1  12232   23333343    44555555555443368888888754

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.62  E-value=0.029  Score=51.05  Aligned_cols=83  Identities=12%  Similarity=0.097  Sum_probs=52.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCC-----------chH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEED-----------REG   71 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----------~~~   71 (266)
                      .+.+++|.|+ |.+|...+..+...|+.|++++ +.++++ ..+.+        ...++..|..+.           .++
T Consensus       163 p~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle-~a~~l--------Ga~~v~v~~~e~g~~~~gYa~~~s~~  232 (511)
T TIGR00561       163 PPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKE-QVQSM--------GAEFLELDFKEEGGSGDGYAKVMSEE  232 (511)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHc--------CCeEEeccccccccccccceeecCHH
Confidence            4578999997 6699999999999999999988 555433 33332        223334443210           011


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEcCCC
Q 024517           72 AFDEAVDKACQILGNLDAFVHCYTY   96 (266)
Q Consensus        72 ~v~~~~~~~~~~~g~id~li~~ag~   96 (266)
                      ..++..+...++....|++|+++-+
T Consensus       233 ~~~~~~~~~~e~~~~~DIVI~Tali  257 (511)
T TIGR00561       233 FIAAEMELFAAQAKEVDIIITTALI  257 (511)
T ss_pred             HHHHHHHHHHHHhCCCCEEEECccc
Confidence            3333444445555679999999844

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.61  E-value=0.01  Score=51.28  Aligned_cols=80  Identities=13%  Similarity=0.315  Sum_probs=49.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|.++||+|+++++|..+++.+...|++|+.+. +.++.+.+.+.+      +.. .  ..|..+.+  +..+.+.+.. 
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l------Ga~-~--vi~~~~~~--~~~~~i~~~~-  218 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL------GFD-D--AFNYKEEP--DLDAALKRYF-  218 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc------CCc-e--eEEcCCcc--cHHHHHHHhC-
Confidence            578999999999999999998888899988877 444433332212      121 1  12333322  2222232221 


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                      . +++|+++.+.|.
T Consensus       219 ~-~gvd~v~d~~g~  231 (338)
T cd08295         219 P-NGIDIYFDNVGG  231 (338)
T ss_pred             C-CCcEEEEECCCH
Confidence            1 469999998763

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.59  E-value=0.011  Score=49.77  Aligned_cols=46  Identities=15%  Similarity=0.349  Sum_probs=37.3

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHh
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMM   49 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~   49 (266)
                      +++|+++|.|+ ||.+++++..|++.|+ ++++++ +.++.+++++.+.
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~  172 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVIN  172 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh
Confidence            46789999998 5689999999999998 677887 5567777776654

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.58  E-value=0.012  Score=51.21  Aligned_cols=80  Identities=13%  Similarity=0.275  Sum_probs=49.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|.++||+|+++++|..+++.....|++|+.++ +.++.+.+.+++      +...   ..|-.+.+  ...+.+.+.. 
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l------Ga~~---vi~~~~~~--~~~~~i~~~~-  225 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL------GFDE---AFNYKEEP--DLDAALKRYF-  225 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc------CCCE---EEECCCcc--cHHHHHHHHC-
Confidence            578999999999999999988888899988877 444433222232      2221   12333222  2222232221 


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                       -+++|+++.+.|.
T Consensus       226 -~~gvD~v~d~vG~  238 (348)
T PLN03154        226 -PEGIDIYFDNVGG  238 (348)
T ss_pred             -CCCcEEEEECCCH
Confidence             1369999999864

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.58  E-value=0.038  Score=47.48  Aligned_cols=73  Identities=14%  Similarity=0.198  Sum_probs=49.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      .|++++|+|.+ |+|...++.....|++|+.+++.++-.+.++++-      .+. +  .+-++++  ..+.+-+     
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lG------Ad~-~--i~~~~~~--~~~~~~~-----  228 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLG------ADH-V--INSSDSD--ALEAVKE-----  228 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhC------CcE-E--EEcCCch--hhHHhHh-----
Confidence            48999999999 9999888888889999999995544445555552      222 2  2333444  3222222     


Q ss_pred             hCCCCEEEEcCC
Q 024517           84 LGNLDAFVHCYT   95 (266)
Q Consensus        84 ~g~id~li~~ag   95 (266)
                        .+|++|..++
T Consensus       229 --~~d~ii~tv~  238 (339)
T COG1064         229 --IADAIIDTVG  238 (339)
T ss_pred             --hCcEEEECCC
Confidence              2899999986

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.56  E-value=0.016  Score=48.97  Aligned_cols=45  Identities=20%  Similarity=0.265  Sum_probs=34.5

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEecc----cccHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNE----RRLSSVAEKM   48 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~----~~~~~~~~~~   48 (266)
                      +++|+++|.|++ |-+++++..|+..|+ ++.++.|.    ++.+++++++
T Consensus       122 ~~~k~vlvlGaG-GaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~  171 (288)
T PRK12749        122 IKGKTMVLLGAG-GASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRV  171 (288)
T ss_pred             cCCCEEEEECCc-HHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHh
Confidence            578999999975 569999999999998 77788754    2555555554

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.51  E-value=0.015  Score=50.37  Aligned_cols=33  Identities=21%  Similarity=0.336  Sum_probs=29.9

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG   36 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~   36 (266)
                      |+.++|+|.|+ ||+|..+++.|+..|. ++.++|
T Consensus        22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD   55 (339)
T PRK07688         22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVD   55 (339)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEe
Confidence            57888999998 5799999999999999 888988

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.51  E-value=0.048  Score=47.25  Aligned_cols=75  Identities=24%  Similarity=0.265  Sum_probs=47.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .+++++|+|+ +++|...++.+...|+ +|++++ +++++ +.++++      |...   ..|..+.   ++.+    ..
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~-~~a~~l------Ga~~---vi~~~~~---~~~~----~~  230 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSL-SLAREM------GADK---LVNPQND---DLDH----YK  230 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHH-HHHHHc------CCcE---EecCCcc---cHHH----Hh
Confidence            5789999986 8999999988888899 577777 44443 333333      2221   1243332   2222    22


Q ss_pred             HHhCCCCEEEEcCCC
Q 024517           82 QILGNLDAFVHCYTY   96 (266)
Q Consensus        82 ~~~g~id~li~~ag~   96 (266)
                      ...+.+|+++.++|.
T Consensus       231 ~~~g~~D~vid~~G~  245 (343)
T PRK09880        231 AEKGYFDVSFEVSGH  245 (343)
T ss_pred             ccCCCCCEEEECCCC
Confidence            223569999999874

>PRK04148 hypothetical protein; Provisional

Probab=96.50  E-value=0.0083  Score=44.39  Aligned_cols=55  Identities=15%  Similarity=0.241  Sum_probs=42.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCc
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDR   69 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   69 (266)
                      +++++++.|.+  .|.++|..|.+.|++|+.+| +++..+...+         ..+.++..|+.+++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~---------~~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKK---------LGLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH---------hCCeEEECcCCCCC
Confidence            45779999998  68889999999999999999 6654333321         24578888999887

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.48  E-value=0.014  Score=49.33  Aligned_cols=48  Identities=21%  Similarity=0.362  Sum_probs=39.5

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcc
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGS   51 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~   51 (266)
                      +++|+++|.|+++ .|++++..|++.|+ +|++++ +.++.+++++.+...
T Consensus       125 ~~~k~vlIlGaGG-aaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~  174 (284)
T PRK12549        125 ASLERVVQLGAGG-AGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR  174 (284)
T ss_pred             ccCCEEEEECCcH-HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh
Confidence            5678999999855 99999999999998 788988 667777777777543

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.47  E-value=0.018  Score=47.02  Aligned_cols=81  Identities=21%  Similarity=0.308  Sum_probs=51.4

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cc-------------------cccHHHHHHHhcccCCCCCeEEE
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NE-------------------RRLSSVAEKMMGSLKGGQPVEVV   61 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~-------------------~~~~~~~~~~~~~~~~~~~~~~~   61 (266)
                      +++++|+|.|++ |+|..+++.|+..|. ++.++| +.                   .+.+...+.+++..+. .++..+
T Consensus        19 L~~~~VlivG~G-glGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~-~~i~~~   96 (228)
T cd00757          19 LKNARVLVVGAG-GLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPD-VEIEAY   96 (228)
T ss_pred             HhCCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCC-CEEEEe
Confidence            567899999855 699999999999999 777775 21                   2334445555554432 455555


Q ss_pred             EEecCCCchHHHHHHHHHHHHHhCCCCEEEEcCC
Q 024517           62 GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYT   95 (266)
Q Consensus        62 ~~D~~~~~~~~v~~~~~~~~~~~g~id~li~~ag   95 (266)
                      ..+++. +  ...+++       .+.|++|.+..
T Consensus        97 ~~~i~~-~--~~~~~~-------~~~DvVi~~~d  120 (228)
T cd00757          97 NERLDA-E--NAEELI-------AGYDLVLDCTD  120 (228)
T ss_pred             cceeCH-H--HHHHHH-------hCCCEEEEcCC
Confidence            555532 2  232222       35788888864

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.45  E-value=0.012  Score=50.86  Aligned_cols=78  Identities=12%  Similarity=0.250  Sum_probs=49.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +.++||+||++++|..+++.....|+ +|+.+. +.++.+.+.+++      +...   ..|..+.+   ..+.+.+...
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l------Ga~~---vi~~~~~~---~~~~i~~~~~  222 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL------GFDA---AINYKTDN---VAERLRELCP  222 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc------CCcE---EEECCCCC---HHHHHHHHCC
Confidence            37999999999999999988888899 788887 444443333322      2221   12333332   2233333221


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                        +++|+++.++|.
T Consensus       223 --~gvd~vid~~g~  234 (345)
T cd08293         223 --EGVDVYFDNVGG  234 (345)
T ss_pred             --CCceEEEECCCc
Confidence              469999998864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.45  E-value=0.12  Score=43.97  Aligned_cols=35  Identities=14%  Similarity=0.144  Sum_probs=31.1

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecc
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE   38 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~   38 (266)
                      +.+++++|.|. |++|+.++..|...|++|.++++.
T Consensus       150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~  184 (296)
T PRK08306        150 IHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARK  184 (296)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECC
Confidence            57899999998 569999999999999999999843

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.43  E-value=0.075  Score=47.59  Aligned_cols=116  Identities=16%  Similarity=0.219  Sum_probs=75.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHc-------CC--eEEEEe-cccccHHHHHHHhcccCC-CCCeEEEEEecCCCchHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKR-------GC--RLVLVG-NERRLSSVAEKMMGSLKG-GQPVEVVGLDMEEDREGAFDE   75 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~-------g~--~v~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~v~~   75 (266)
                      +|.|+|++|.+|.+++..|+..       +.  ++++++ +.+.++..+..++..... ..++.+ ..  .+.+      
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~--~~ye------  172 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GI--DPYE------  172 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ec--CCHH------
Confidence            5899999999999999999988       65  788899 888888777777644211 111111 11  1211      


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhc-cCCCCeEEEEeccc
Q 024517           76 AVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE-SKAGGSIVFLTSII  149 (266)
Q Consensus        76 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~g~iv~iss~~  149 (266)
                             .+..-|++|..+|..  ..+  .++.   ...++.|    ..+++...+.+.+ ..+++.||.+|...
T Consensus       173 -------~~kdaDiVVitAG~p--rkp--G~tR---~dLl~~N----~~I~k~i~~~I~~~a~p~~ivIVVsNPv  229 (444)
T PLN00112        173 -------VFQDAEWALLIGAKP--RGP--GMER---ADLLDIN----GQIFAEQGKALNEVASRNVKVIVVGNPC  229 (444)
T ss_pred             -------HhCcCCEEEECCCCC--CCC--CCCH---HHHHHHH----HHHHHHHHHHHHHhcCCCeEEEEcCCcH
Confidence                   124689999999872  222  2333   3333433    4567777777777 45478888888653

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.43  E-value=0.081  Score=45.53  Aligned_cols=116  Identities=16%  Similarity=0.175  Sum_probs=69.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC-------eEEEEe-cc--cccHHHHHHHhccc-CCCCCeEEEEEecCCCchHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGC-------RLVLVG-NE--RRLSSVAEKMMGSL-KGGQPVEVVGLDMEEDREGAFD   74 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~-------~v~~~~-~~--~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~v~   74 (266)
                      -++.|+|++|++|.+++..|...|.       .+++.| +.  +.++..+..+.... +...+..     ++. +  .  
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-----i~~-~--~--   73 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV-----ATT-D--P--   73 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE-----Eec-C--h--
Confidence            3689999999999999999998885       688998 44  23455554544321 1001111     111 1  1  


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCC-CCeEEEEecc
Q 024517           75 EAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA-GGSIVFLTSI  148 (266)
Q Consensus        75 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~iv~iss~  148 (266)
                        .    +.+..-|++|..||..  .++  .++.   ...+..|    ..+++.+.+.+.+... .+.++.+|.+
T Consensus        74 --~----~~~~daDvVVitAG~~--~k~--g~tR---~dll~~N----a~i~~~i~~~i~~~~~~~~iiivvsNP  131 (323)
T TIGR01759        74 --E----EAFKDVDAALLVGAFP--RKP--GMER---ADLLSKN----GKIFKEQGKALNKVAKKDVKVLVVGNP  131 (323)
T ss_pred             --H----HHhCCCCEEEEeCCCC--CCC--CCcH---HHHHHHH----HHHHHHHHHHHHhhCCCCeEEEEeCCc
Confidence              1    1224679999999972  221  2333   3344444    4566777777666643 6788888764

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK14968 putative methyltransferase; Provisional

Probab=96.43  E-value=0.12  Score=40.33  Aligned_cols=123  Identities=24%  Similarity=0.244  Sum_probs=67.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +++++|-.|++.|.   ++..+++++.+|+.++ +++..+...+.+.........+.++.+|+.+..       .+    
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-------~~----   88 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEPF-------RG----   88 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEeccccccc-------cc----
Confidence            57788999988775   5666666688999999 665555555554332111112777777765422       11    


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHH---HHHHHHHHHHHhccCCCCeEEEEec
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAP---WFLLKAVGRRMKESKAGGSIVFLTS  147 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~---~~l~~~~~~~~~~~~~~g~iv~iss  147 (266)
                        +.+|.++.|..+. +..+.... .+.+...+.....+.   -.+++.+.+.|+.   +|.++++.+
T Consensus        89 --~~~d~vi~n~p~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk~---gG~~~~~~~  149 (188)
T PRK14968         89 --DKFDVILFNPPYL-PTEEEEEW-DDWLNYALSGGKDGREVIDRFLDEVGRYLKP---GGRILLLQS  149 (188)
T ss_pred             --cCceEEEECCCcC-CCCchhhh-hhhhhhhhccCcChHHHHHHHHHHHHHhcCC---CeEEEEEEc
Confidence              2689999987763 22222111 122222333332222   2245555565544   577666544

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.43  E-value=0.016  Score=49.52  Aligned_cols=34  Identities=21%  Similarity=0.300  Sum_probs=30.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      .+.+++|+|+++++|.++++.+...|++|+.+.+
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~  195 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTR  195 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeC
Confidence            4678999999999999999999999999988773

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.42  E-value=0.008  Score=48.97  Aligned_cols=75  Identities=21%  Similarity=0.386  Sum_probs=51.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      +.++|.|++. +|..+|+.|.++|+.|++++ ++++.++....   .    .....+..|-++++  .++++    -  .
T Consensus         1 m~iiIiG~G~-vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~---~----~~~~~v~gd~t~~~--~L~~a----g--i   64 (225)
T COG0569           1 MKIIIIGAGR-VGRSVARELSEEGHNVVLIDRDEERVEEFLAD---E----LDTHVVIGDATDED--VLEEA----G--I   64 (225)
T ss_pred             CEEEEECCcH-HHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh---h----cceEEEEecCCCHH--HHHhc----C--C
Confidence            4577888877 89999999999999999999 66555553321   1    35677778888766  33222    0  1


Q ss_pred             CCCCEEEEcCCC
Q 024517           85 GNLDAFVHCYTY   96 (266)
Q Consensus        85 g~id~li~~ag~   96 (266)
                      ...|+++...|-
T Consensus        65 ~~aD~vva~t~~   76 (225)
T COG0569          65 DDADAVVAATGN   76 (225)
T ss_pred             CcCCEEEEeeCC
Confidence            356777776653

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.39  E-value=0.021  Score=51.54  Aligned_cols=35  Identities=23%  Similarity=0.297  Sum_probs=33.0

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      |++.+|+++|+|.+ ++|.++|+.|+++|++|.+.+
T Consensus         1 ~~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d   35 (445)
T PRK04308          1 MTFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYD   35 (445)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEe
Confidence            88899999999987 799999999999999999988

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.38  E-value=0.029  Score=46.31  Aligned_cols=33  Identities=30%  Similarity=0.294  Sum_probs=29.3

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG   36 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~   36 (266)
                      |++++|+|.|+ ||+|..+++.|+..|. ++.++|
T Consensus        30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD   63 (245)
T PRK05690         30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVD   63 (245)
T ss_pred             hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEc
Confidence            57889999998 7899999999999998 777776

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.37  E-value=0.07  Score=45.91  Aligned_cols=125  Identities=13%  Similarity=0.182  Sum_probs=70.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccC-CCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLK-GGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +.+++.|+|+ |.+|..++..++.+|. .|+++| +++..+.....+..... .+....+..  .+|.+         . 
T Consensus         5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~---------~-   71 (321)
T PTZ00082          5 KRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYE---------D-   71 (321)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHH---------H-
Confidence            4568999995 6699999999999995 899999 66654322222211100 011222211  01111         1 


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                         +..-|++|.++|.... ....+.+.. ....+..|    +.+.+.+.+.+.+..+++.++++|.+..
T Consensus        72 ---l~~aDiVI~tag~~~~-~~~~~~~~~-r~~~l~~n----~~i~~~i~~~i~~~~p~a~~iv~sNP~d  132 (321)
T PTZ00082         72 ---IAGSDVVIVTAGLTKR-PGKSDKEWN-RDDLLPLN----AKIMDEVAEGIKKYCPNAFVIVITNPLD  132 (321)
T ss_pred             ---hCCCCEEEECCCCCCC-CCCCcCCCC-HHHHHHHH----HHHHHHHHHHHHHHCCCeEEEEecCcHH
Confidence               2367999999987321 111111111 13334444    3467777777776654578888887654

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.35  E-value=0.016  Score=48.74  Aligned_cols=74  Identities=22%  Similarity=0.366  Sum_probs=52.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++++++|.|++| .+++++..|++.|+ +++++. +.++.+++++.+.+..   .  .....+..+.+  ..+       
T Consensus       125 ~~~~vlilGAGG-AarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~---~--~~~~~~~~~~~--~~~-------  189 (283)
T COG0169         125 TGKRVLILGAGG-AARAVAFALAEAGAKRITVVNRTRERAEELADLFGELG---A--AVEAAALADLE--GLE-------  189 (283)
T ss_pred             CCCEEEEECCcH-HHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc---c--ccccccccccc--ccc-------
Confidence            578999999876 79999999999996 788888 6777788877775431   1  11222333333  111       


Q ss_pred             HHhCCCCEEEEcCCC
Q 024517           82 QILGNLDAFVHCYTY   96 (266)
Q Consensus        82 ~~~g~id~li~~ag~   96 (266)
                          ..|++||+.+.
T Consensus       190 ----~~dliINaTp~  200 (283)
T COG0169         190 ----EADLLINATPV  200 (283)
T ss_pred             ----ccCEEEECCCC
Confidence                46999999765

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.34  E-value=0.043  Score=47.17  Aligned_cols=120  Identities=13%  Similarity=0.227  Sum_probs=70.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcC-CeEEEEe-cccccHHHHHHHhcccC-CCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRG-CRLVLVG-NERRLSSVAEKMMGSLK-GGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g-~~v~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ..+++.|+|+ |.+|..++..++..| +.+++.| +.+..+.....+..... .+....     +....  +.+ .+   
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~-----i~~~~--d~~-~l---   71 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNIN-----ILGTN--NYE-DI---   71 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeE-----EEeCC--CHH-Hh---
Confidence            4678999997 779999999999999 6899999 66554433222221100 001111     11111  111 12   


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                          ..-|++|.++|.. . .+  ..+.   ...+..|.    -+.+.+.+.|.+..+++.++++|.+..
T Consensus        72 ----~~ADiVVitag~~-~-~~--g~~r---~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsNP~d  126 (319)
T PTZ00117         72 ----KDSDVVVITAGVQ-R-KE--EMTR---EDLLTING----KIMKSVAESVKKYCPNAFVICVTNPLD  126 (319)
T ss_pred             ----CCCCEEEECCCCC-C-CC--CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecChHH
Confidence                3679999999862 1 11  2333   33444444    466777777766654677888887553

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.34  E-value=0.013  Score=43.92  Aligned_cols=35  Identities=14%  Similarity=0.246  Sum_probs=33.6

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      +++||+++|.|.+.-+|+.++..|.++|++|.+++
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~   59 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCD   59 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeC
Confidence            57899999999999999999999999999999998

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.31  E-value=0.0065  Score=51.39  Aligned_cols=76  Identities=16%  Similarity=0.258  Sum_probs=58.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ..-++|-||++..|.-+|++|+.+|.+-.+.+ +..+++.+...+      +.++..+++.+  +.  .++++++     
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L------G~~~~~~p~~~--p~--~~~~~~~-----   70 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL------GPEAAVFPLGV--PA--ALEAMAS-----   70 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc------CccccccCCCC--HH--HHHHHHh-----
Confidence            45689999999999999999999999988888 777888777776      34555555544  44  5555553     


Q ss_pred             hCCCCEEEEcCCCC
Q 024517           84 LGNLDAFVHCYTYE   97 (266)
Q Consensus        84 ~g~id~li~~ag~~   97 (266)
                        ..++|+||+|-+
T Consensus        71 --~~~VVlncvGPy   82 (382)
T COG3268          71 --RTQVVLNCVGPY   82 (382)
T ss_pred             --cceEEEeccccc
Confidence              578999999864

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.30  E-value=0.016  Score=49.58  Aligned_cols=117  Identities=16%  Similarity=0.173  Sum_probs=68.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ++.|+|++|.+|.++|..|+..+.  .++++| ++  .+..+..+....   ....+..+  +..+  +       ..+.
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~---~~~~i~~~--~~~~--~-------~~~~   64 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIP---TAASVKGF--SGEE--G-------LENA   64 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCC---cCceEEEe--cCCC--c-------hHHH
Confidence            478999999999999999998875  688888 44  222222222110   01111110  0111  1       1122


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                      +..-|++|.++|.. . .+  ..+   -...+..|+.    +.+...+.+.+..+++.++++|.+.-
T Consensus        65 ~~daDivvitaG~~-~-~~--g~~---R~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPvD  120 (312)
T TIGR01772        65 LKGADVVVIPAGVP-R-KP--GMT---RDDLFNVNAG----IVKDLVAAVAESCPKAMILVITNPVN  120 (312)
T ss_pred             cCCCCEEEEeCCCC-C-CC--Ccc---HHHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCchh
Confidence            35789999999972 2 21  222   3344555555    66777777666655788999988763

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.28  E-value=0.028  Score=47.55  Aligned_cols=79  Identities=14%  Similarity=0.234  Sum_probs=50.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++++++|+|+++++|..+++.+...|++|++++ +.++.+.. ..+      +..   ...+..+.+  ...++.+ ...
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~------g~~---~~~~~~~~~--~~~~~~~-~~~  205 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL------GAD---VAINYRTED--FAEEVKE-ATG  205 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc------CCC---EEEeCCchh--HHHHHHH-HhC
Confidence            578999999999999999999999999998887 43333322 222      111   123333333  2223222 211


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                       .+++|.+++++|.
T Consensus       206 -~~~~d~vi~~~g~  218 (323)
T cd05276         206 -GRGVDVILDMVGG  218 (323)
T ss_pred             -CCCeEEEEECCch
Confidence             1369999999874

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.26  E-value=0.011  Score=46.27  Aligned_cols=38  Identities=21%  Similarity=0.237  Sum_probs=31.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccc
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERR   40 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~   40 (266)
                      +++|+++.|.|- |.||+++|+.+...|++|+..++..+
T Consensus        33 ~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~   70 (178)
T PF02826_consen   33 ELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPK   70 (178)
T ss_dssp             -STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCH
T ss_pred             ccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCC
Confidence            478999999977 55999999999999999999984433

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.26  E-value=0.027  Score=43.11  Aligned_cols=84  Identities=15%  Similarity=0.189  Sum_probs=52.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHh------cccC--CCCCeEEEEEecCCCchHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMM------GSLK--GGQPVEVVGLDMEEDREGAF   73 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~~~~D~~~~~~~~v   73 (266)
                      +++||.+||.||+. +|...++.|++.|++|.+++ ++..+++.+ +.      +.+.  .-....+ ..-.++.+  ++
T Consensus        10 ~l~~~~vlVvGGG~-va~rka~~Ll~~ga~V~VIs-p~~~~~l~~-l~~i~~~~~~~~~~dl~~a~l-ViaaT~d~--e~   83 (157)
T PRK06719         10 NLHNKVVVIIGGGK-IAYRKASGLKDTGAFVTVVS-PEICKEMKE-LPYITWKQKTFSNDDIKDAHL-IYAATNQH--AV   83 (157)
T ss_pred             EcCCCEEEEECCCH-HHHHHHHHHHhCCCEEEEEc-CccCHHHHh-ccCcEEEecccChhcCCCceE-EEECCCCH--HH
Confidence            57999999999887 99999999999999999885 333333322 11      0010  0012222 23356666  67


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCC
Q 024517           74 DEAVDKACQILGNLDAFVHCYT   95 (266)
Q Consensus        74 ~~~~~~~~~~~g~id~li~~ag   95 (266)
                      +..+.+..+..    .++|++.
T Consensus        84 N~~i~~~a~~~----~~vn~~d  101 (157)
T PRK06719         84 NMMVKQAAHDF----QWVNVVS  101 (157)
T ss_pred             HHHHHHHHHHC----CcEEECC
Confidence            77776655441    3566654

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.25  E-value=0.02  Score=50.96  Aligned_cols=45  Identities=11%  Similarity=0.200  Sum_probs=35.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEK   47 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~   47 (266)
                      ++++|+++|.|+ |++|+.+++.|..+|+ +++++. +.++.+++.++
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~  224 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSA  224 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH
Confidence            468999999999 7799999999999997 677777 44555554444

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.23  E-value=0.1  Score=42.86  Aligned_cols=77  Identities=14%  Similarity=0.144  Sum_probs=54.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|.++||--|.+|+|..+|+.+-..|++++.+. ..++.+...+          +-.-+..|.+..+      +++++..
T Consensus       146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ake----------nG~~h~I~y~~eD------~v~~V~k  209 (336)
T KOG1197|consen  146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKE----------NGAEHPIDYSTED------YVDEVKK  209 (336)
T ss_pred             CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHh----------cCCcceeeccchh------HHHHHHh
Confidence            588999999999999999999999999999887 5444433221          2223445666655      3444443


Q ss_pred             Hh--CCCCEEEEcCCC
Q 024517           83 IL--GNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~--g~id~li~~ag~   96 (266)
                      -.  ..+|++....|.
T Consensus       210 iTngKGVd~vyDsvG~  225 (336)
T KOG1197|consen  210 ITNGKGVDAVYDSVGK  225 (336)
T ss_pred             ccCCCCceeeeccccc
Confidence            22  359999988876

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.23  E-value=0.13  Score=43.95  Aligned_cols=115  Identities=16%  Similarity=0.170  Sum_probs=67.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHcC--CeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRG--CRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g--~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ++.|.|+ |.+|..++..|+.+|  ..|++++ +.++.+..+..+.....-.....+     ...+       .+    .
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i-----~~~d-------~~----~   64 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRI-----YAGD-------YA----D   64 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEE-----eeCC-------HH----H
Confidence            4788998 779999999999999  5799999 666555444444322110011111     1111       11    1


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                      +...|++|.+++.. . .+  ..+.   ...+.    ....+.+.+.+.+.+...+|.++.++...
T Consensus        65 l~~aDiViita~~~-~-~~--~~~r---~dl~~----~n~~i~~~~~~~l~~~~~~giiiv~tNP~  119 (308)
T cd05292          65 CKGADVVVITAGAN-Q-KP--GETR---LDLLK----RNVAIFKEIIPQILKYAPDAILLVVTNPV  119 (308)
T ss_pred             hCCCCEEEEccCCC-C-CC--CCCH---HHHHH----HHHHHHHHHHHHHHHHCCCeEEEEecCcH
Confidence            24789999999862 2 11  1222   22333    34456666666666555468888887643

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.23  E-value=0.011  Score=45.36  Aligned_cols=43  Identities=16%  Similarity=0.413  Sum_probs=33.6

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSV   44 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~   44 (266)
                      +++||+++|.|.+.-+|+.++..|.++|+.|.++. +.+.+++.
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~   76 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEI   76 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHH
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccce
Confidence            57899999999999999999999999999999998 55444443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.22  E-value=0.0025  Score=45.17  Aligned_cols=36  Identities=19%  Similarity=0.375  Sum_probs=30.0

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      +++++|++||.|| |.+|..=++.|++.|++|.+++.
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~   38 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISP   38 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEES
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECC
Confidence            3689999999999 55999999999999999999983

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.18  E-value=0.028  Score=47.54  Aligned_cols=36  Identities=17%  Similarity=0.220  Sum_probs=31.8

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecc
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE   38 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~   38 (266)
                      ++.+++++|+|.++ +|+++++.|...|++|++.++.
T Consensus       148 ~l~gk~v~IiG~G~-iG~avA~~L~~~G~~V~v~~R~  183 (287)
T TIGR02853       148 TIHGSNVMVLGFGR-TGMTIARTFSALGARVFVGARS  183 (287)
T ss_pred             CCCCCEEEEEcChH-HHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999955 9999999999999999988843

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.16  E-value=0.038  Score=48.24  Aligned_cols=33  Identities=12%  Similarity=0.205  Sum_probs=29.0

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG   36 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~   36 (266)
                      |++++|+|.|+ ||+|..+++.|+..|. ++.++|
T Consensus        26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD   59 (355)
T PRK05597         26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIID   59 (355)
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEe
Confidence            57889999988 5699999999999998 777876

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.13  E-value=0.056  Score=40.56  Aligned_cols=29  Identities=34%  Similarity=0.619  Sum_probs=25.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-eEEEEe
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC-RLVLVG   36 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~-~v~~~~   36 (266)
                      +++|.|. +|+|..+++.|+..|. ++.++|
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD   30 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLID   30 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEc
Confidence            3788887 7899999999999999 788886

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.13  E-value=0.032  Score=44.64  Aligned_cols=35  Identities=26%  Similarity=0.513  Sum_probs=31.5

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      +++++|.+||.||+ .+|...++.|.+.|++|++++
T Consensus         6 l~l~~k~vLVIGgG-~va~~ka~~Ll~~ga~V~VIs   40 (202)
T PRK06718          6 IDLSNKRVVIVGGG-KVAGRRAITLLKYGAHIVVIS   40 (202)
T ss_pred             EEcCCCEEEEECCC-HHHHHHHHHHHHCCCeEEEEc
Confidence            36799999999994 599999999999999999887

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.12  E-value=0.014  Score=45.26  Aligned_cols=36  Identities=17%  Similarity=0.296  Sum_probs=32.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      ++.+|+++|.|++.-+|..+++.|.++|++|.++.+
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r   76 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHS   76 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEEC
Confidence            578999999999776799999999999999888873

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.12  E-value=0.045  Score=44.16  Aligned_cols=33  Identities=30%  Similarity=0.411  Sum_probs=29.0

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG   36 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~   36 (266)
                      |+.++|+|.|+ ||+|..+++.|+..|. ++.++|
T Consensus        26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD   59 (212)
T PRK08644         26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVD   59 (212)
T ss_pred             HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEe
Confidence            56788999996 5699999999999999 588887

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.12  E-value=0.075  Score=45.46  Aligned_cols=34  Identities=12%  Similarity=0.219  Sum_probs=30.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      ++.+++|.|+++++|.++++.+.+.|++|+.+.+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~  178 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAG  178 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC
Confidence            4789999999999999999999999999888873

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.11  E-value=0.04  Score=40.92  Aligned_cols=79  Identities=23%  Similarity=0.443  Sum_probs=51.7

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cc-------------------cccHHHHHHHhcccCCCCCeEEEEE
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NE-------------------RRLSSVAEKMMGSLKGGQPVEVVGL   63 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~   63 (266)
                      .++++|.|+++ +|..+++.|+..|. ++.++| ..                   .+.+...+.+++..+ ..++..+..
T Consensus         2 ~~~v~iiG~G~-vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np-~~~v~~~~~   79 (135)
T PF00899_consen    2 NKRVLIIGAGG-VGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINP-DVEVEAIPE   79 (135)
T ss_dssp             T-EEEEESTSH-HHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHST-TSEEEEEES
T ss_pred             CCEEEEECcCH-HHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcC-ceeeeeeec
Confidence            56888888765 99999999999999 788876 21                   133445555655544 356666666


Q ss_pred             ecCCCchHHHHHHHHHHHHHhCCCCEEEEcCC
Q 024517           64 DMEEDREGAFDEAVDKACQILGNLDAFVHCYT   95 (266)
Q Consensus        64 D~~~~~~~~v~~~~~~~~~~~g~id~li~~ag   95 (266)
                      +++. +  ...+++       ...|++|.+..
T Consensus        80 ~~~~-~--~~~~~~-------~~~d~vi~~~d  101 (135)
T PF00899_consen   80 KIDE-E--NIEELL-------KDYDIVIDCVD  101 (135)
T ss_dssp             HCSH-H--HHHHHH-------HTSSEEEEESS
T ss_pred             cccc-c--cccccc-------cCCCEEEEecC
Confidence            6632 2  333333       25788888753

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.07  E-value=0.042  Score=48.42  Aligned_cols=81  Identities=21%  Similarity=0.262  Sum_probs=51.1

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-c-------------------ccccHHHHHHHhcccCCCCCeEEE
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-N-------------------ERRLSSVAEKMMGSLKGGQPVEVV   61 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~-------------------~~~~~~~~~~~~~~~~~~~~~~~~   61 (266)
                      +++++|+|.|+ ||+|..++..|+..|. ++.++| +                   ..+.+...+.+.+..+. .++..+
T Consensus       133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~-v~v~~~  210 (376)
T PRK08762        133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPD-VQVEAV  210 (376)
T ss_pred             HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCC-CEEEEE
Confidence            56778888866 6799999999999999 788888 4                   23445555666555432 334444


Q ss_pred             EEecCCCchHHHHHHHHHHHHHhCCCCEEEEcCC
Q 024517           62 GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYT   95 (266)
Q Consensus        62 ~~D~~~~~~~~v~~~~~~~~~~~g~id~li~~ag   95 (266)
                      ...+++ +  .+..++       ...|++|++..
T Consensus       211 ~~~~~~-~--~~~~~~-------~~~D~Vv~~~d  234 (376)
T PRK08762        211 QERVTS-D--NVEALL-------QDVDVVVDGAD  234 (376)
T ss_pred             eccCCh-H--HHHHHH-------hCCCEEEECCC
Confidence            333332 1  222222       35788888864

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.07  E-value=0.13  Score=43.82  Aligned_cols=116  Identities=16%  Similarity=0.160  Sum_probs=71.5

Q ss_pred             EEEecCCCchHHHHHHHHHHcC--CeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            8 VLLTSDGDEISKNIAFHLAKRG--CRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g--~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      +.|.|+ |++|..++..++..|  .+++++| +.++.+.....+...........+.   .+  .  +    .+    .+
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~---~~--~--~----~~----~l   64 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIV---RG--G--D----YA----DA   64 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEE---EC--C--C----HH----Hh
Confidence            357787 569999999999998  5799999 7777777777775442211111111   11  1  1    11    22


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                      ..-|++|.++|.. . .+  .++..   ..+.    ...-+++.+.+.+.+..+++.++++|.+..
T Consensus        65 ~~aDiVIitag~p-~-~~--~~~R~---~l~~----~n~~i~~~~~~~i~~~~p~~~viv~sNP~d  119 (300)
T cd00300          65 ADADIVVITAGAP-R-KP--GETRL---DLIN----RNAPILRSVITNLKKYGPDAIILVVSNPVD  119 (300)
T ss_pred             CCCCEEEEcCCCC-C-CC--CCCHH---HHHH----HHHHHHHHHHHHHHHhCCCeEEEEccChHH
Confidence            4689999999872 2 21  23332   2222    345566777777666655788888887543

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK08223 hypothetical protein; Validated

Probab=96.07  E-value=0.05  Score=45.76  Aligned_cols=33  Identities=18%  Similarity=0.292  Sum_probs=28.8

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG   36 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~   36 (266)
                      |++.+|+|.|++ |+|..++..|+..|. ++.++|
T Consensus        25 L~~s~VlIvG~G-GLGs~va~~LA~aGVG~i~lvD   58 (287)
T PRK08223         25 LRNSRVAIAGLG-GVGGIHLLTLARLGIGKFTIAD   58 (287)
T ss_pred             HhcCCEEEECCC-HHHHHHHHHHHHhCCCeEEEEe
Confidence            567889999876 599999999999998 777877

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.04  E-value=0.19  Score=42.94  Aligned_cols=116  Identities=10%  Similarity=0.117  Sum_probs=72.7

Q ss_pred             EEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccC--CCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLK--GGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +.|.|+ |.+|..+|..++.++.  .++++| +.+.++..+..+.....  ...++.+..   .+.+         .   
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~y~---------~---   65 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GDYD---------D---   65 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CCHH---------H---
Confidence            678888 8899999999998876  699999 77777666666654211  011233322   1211         1   


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                       +..-|++|-.||..  ..+  .++.+ -...+.    ....+.+.+.|.+.+...++.++.+|.+.
T Consensus        66 -~~~aDivvitaG~~--~kp--g~tr~-R~dll~----~N~~I~~~i~~~i~~~~p~~i~ivvsNPv  122 (307)
T cd05290          66 -CADADIIVITAGPS--IDP--GNTDD-RLDLAQ----TNAKIIREIMGNITKVTKEAVIILITNPL  122 (307)
T ss_pred             -hCCCCEEEECCCCC--CCC--CCCch-HHHHHH----HHHHHHHHHHHHHHHhCCCeEEEEecCcH
Confidence             24679999999872  222  23310 122222    34567788888887776568888887754

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.00  E-value=0.12  Score=41.21  Aligned_cols=33  Identities=30%  Similarity=0.513  Sum_probs=29.4

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG   36 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~   36 (266)
                      |+.++|+|.|++ |+|..++..|++.|. +++++|
T Consensus        19 L~~~~V~IvG~G-glGs~ia~~La~~Gvg~i~lvD   52 (200)
T TIGR02354        19 LEQATVAICGLG-GLGSNVAINLARAGIGKLILVD   52 (200)
T ss_pred             HhCCcEEEECcC-HHHHHHHHHHHHcCCCEEEEEC
Confidence            567889999985 599999999999999 688888

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=95.99  E-value=0.045  Score=46.87  Aligned_cols=78  Identities=8%  Similarity=0.215  Sum_probs=49.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|.++||.||++++|..+++.....|++|+.+. +.++. +..+.+      +.+ .  ..|..+.+  ..++ +.+.. 
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~-~~l~~~------Ga~-~--vi~~~~~~--~~~~-v~~~~-  208 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKV-AWLKEL------GFD-A--VFNYKTVS--LEEA-LKEAA-  208 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHc------CCC-E--EEeCCCcc--HHHH-HHHHC-
Confidence            578999999999999999988888999988877 44333 222222      222 1  12444333  2222 22221 


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                       -+++|+++.+.|.
T Consensus       209 -~~gvd~vld~~g~  221 (329)
T cd08294         209 -PDGIDCYFDNVGG  221 (329)
T ss_pred             -CCCcEEEEECCCH
Confidence             1469999998764

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.99  E-value=0.068  Score=41.68  Aligned_cols=29  Identities=34%  Similarity=0.481  Sum_probs=25.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-eEEEEe
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC-RLVLVG   36 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~-~v~~~~   36 (266)
                      +|+|.|+ ||+|..+++.|++.|. ++.++|
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD   30 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVD   30 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEe
Confidence            3678886 6799999999999999 698988

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=95.98  E-value=0.078  Score=45.43  Aligned_cols=89  Identities=13%  Similarity=0.038  Sum_probs=53.8

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccH-H-H-HHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLS-S-V-AEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~-~-~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      ++.||++.|.|- |.||+++|+.+...|++|+..++..... . . ...+.+..+ ..++..+.+.++..    .+.+++
T Consensus       142 ~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~-~sDvv~lh~Plt~~----T~~li~  215 (311)
T PRK08410        142 EIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLK-TSDIISIHAPLNEK----TKNLIA  215 (311)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhh-cCCEEEEeCCCCch----hhcccC
Confidence            478999999997 5599999999999999999887322110 0 0 001111111 15777777777763    344544


Q ss_pred             HHHHHhCCCCEEEEcCCC
Q 024517           79 KACQILGNLDAFVHCYTY   96 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~   96 (266)
                      +-.=..-+.+.++-|.+.
T Consensus       216 ~~~~~~Mk~~a~lIN~aR  233 (311)
T PRK08410        216 YKELKLLKDGAILINVGR  233 (311)
T ss_pred             HHHHHhCCCCeEEEECCC
Confidence            422111256666666654

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.96  E-value=0.08  Score=44.82  Aligned_cols=101  Identities=12%  Similarity=0.128  Sum_probs=63.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecC-CCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDME-EDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~v~~~~~~~~   81 (266)
                      .|+++-|+|+++ +|.--++.--+-|++|++++ ...+.++..+.+-      .+..   +|.+ |++  .++++.+   
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LG------Ad~f---v~~~~d~d--~~~~~~~---  245 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLG------ADVF---VDSTEDPD--IMKAIMK---  245 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcC------ccee---EEecCCHH--HHHHHHH---
Confidence            699999999998 99765555555699999999 5556677776652      3332   2555 555  5555554   


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                          ..|.++|++... ...                       .+..++.+++.   +|++|+++-...
T Consensus       246 ----~~dg~~~~v~~~-a~~-----------------------~~~~~~~~lk~---~Gt~V~vg~p~~  283 (360)
T KOG0023|consen  246 ----TTDGGIDTVSNL-AEH-----------------------ALEPLLGLLKV---NGTLVLVGLPEK  283 (360)
T ss_pred             ----hhcCcceeeeec-ccc-----------------------chHHHHHHhhc---CCEEEEEeCcCC
Confidence                346666665421 100                       11233445554   689999998754

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.95  E-value=0.19  Score=43.80  Aligned_cols=77  Identities=17%  Similarity=0.281  Sum_probs=46.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      .+++++|+|+ |++|...++.+...|++|+++++.+..++..+.+++ +  +.  ..  +|..+.+   +.+    . ..
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~-~--Ga--~~--v~~~~~~---~~~----~-~~  235 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEE-L--GA--TY--VNSSKTP---VAE----V-KL  235 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-c--CC--EE--ecCCccc---hhh----h-hh
Confidence            5789999986 899999998888889998888743211222222221 1  12  22  2433322   222    1 12


Q ss_pred             hCCCCEEEEcCCC
Q 024517           84 LGNLDAFVHCYTY   96 (266)
Q Consensus        84 ~g~id~li~~ag~   96 (266)
                      .+.+|++|.++|.
T Consensus       236 ~~~~d~vid~~g~  248 (355)
T cd08230         236 VGEFDLIIEATGV  248 (355)
T ss_pred             cCCCCEEEECcCC
Confidence            3579999999874

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.92  E-value=0.16  Score=43.38  Aligned_cols=149  Identities=15%  Similarity=0.197  Sum_probs=81.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC--RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      ++.|+|++|.+|.++|..++.++.  .++++|.+ +++..+..++...   ....+..+  ...+  ++       -+.+
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~-~a~g~alDL~~~~---~~~~i~~~--~~~~--~~-------y~~~   66 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV-NTPGVAADLSHIN---TPAKVTGY--LGPE--EL-------KKAL   66 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC-ccceeehHhHhCC---CcceEEEe--cCCC--ch-------HHhc
Confidence            578999999999999999998884  78999932 4433333343221   11111111  0111  11       1123


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccc----------cC
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAE----------RG  154 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~----------~~  154 (266)
                      ..-|++|.+||.. . ++  ..+   -...++.|..    +++...+.+.+..+.+.++++|.+.-..          ..
T Consensus        67 ~daDivvitaG~~-~-k~--g~t---R~dll~~N~~----i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~~~~~s  135 (310)
T cd01337          67 KGADVVVIPAGVP-R-KP--GMT---RDDLFNINAG----IVRDLATAVAKACPKALILIISNPVNSTVPIAAEVLKKAG  135 (310)
T ss_pred             CCCCEEEEeCCCC-C-CC--CCC---HHHHHHHHHH----HHHHHHHHHHHhCCCeEEEEccCchhhHHHHHHHHHHHhc
Confidence            4789999999972 2 21  233   3344455544    4555555555544468999999876221          11


Q ss_pred             CCCCchhhHHhHHHHHHHHHHHHHHhC
Q 024517          155 LYPGAAAYGACAASIHQLVRTAAMEIG  181 (266)
Q Consensus       155 ~~~~~~~y~~sK~a~~~~~~~la~e~~  181 (266)
                      .+|..-..+..--=-..|-..+++.++
T Consensus       136 ~~p~~rviG~~~LDs~R~~~~la~~l~  162 (310)
T cd01337         136 VYDPKRLFGVTTLDVVRANTFVAELLG  162 (310)
T ss_pred             CCCHHHEEeeechHHHHHHHHHHHHhC
Confidence            134334445432111245566777664

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.91  E-value=0.022  Score=47.93  Aligned_cols=36  Identities=6%  Similarity=0.218  Sum_probs=33.8

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      +++||+++|+|.+.-+|+.++..|.++|++|.++.+
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s  190 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHS  190 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeC
Confidence            578999999999999999999999999999999883

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.87  E-value=0.054  Score=47.86  Aligned_cols=45  Identities=27%  Similarity=0.523  Sum_probs=37.3

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKM   48 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~   48 (266)
                      +.++++||.|++- +|.-+|++|.++|. +|+++. +.++.+++++++
T Consensus       176 L~~~~vlvIGAGe-m~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~  222 (414)
T COG0373         176 LKDKKVLVIGAGE-MGELVAKHLAEKGVKKITIANRTLERAEELAKKL  222 (414)
T ss_pred             cccCeEEEEcccH-HHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHh
Confidence            7899999999977 99999999999996 666766 556777777665

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.86  E-value=0.23  Score=42.34  Aligned_cols=117  Identities=18%  Similarity=0.232  Sum_probs=69.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCC-CCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKG-GQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++|.|+|+ |+||.+++..|+.++.  .+++.| +.+.++-....+...... ... ..+..| .+.+            
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~-~~i~~~-~~y~------------   65 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSD-VKITGD-GDYE------------   65 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCc-eEEecC-CChh------------
Confidence            36889999 9999999999998865  789999 756555555555432111 111 111111 1111            


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                       .+..-|+++-.||...  +|-  ++..   .+++.|..    +.+.+.+.+.+...++.++.+|.+.
T Consensus        66 -~~~~aDiVvitAG~pr--KpG--mtR~---DLl~~Na~----I~~~i~~~i~~~~~d~ivlVvtNPv  121 (313)
T COG0039          66 -DLKGADIVVITAGVPR--KPG--MTRL---DLLEKNAK----IVKDIAKAIAKYAPDAIVLVVTNPV  121 (313)
T ss_pred             -hhcCCCEEEEeCCCCC--CCC--CCHH---HHHHhhHH----HHHHHHHHHHhhCCCeEEEEecCcH
Confidence             1246899999998732  221  4443   34444544    4555555555554357888887653

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.81  E-value=0.032  Score=54.91  Aligned_cols=76  Identities=16%  Similarity=0.247  Sum_probs=54.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcC-Ce-------------EEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCC
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRG-CR-------------LVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEED   68 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g-~~-------------v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   68 (266)
                      ..|+|+|.|+ |.||+.+++.|++.. +.             |.+++ +.+..+++.+..       .++..+.+|++|.
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~-------~~~~~v~lDv~D~  639 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI-------ENAEAVQLDVSDS  639 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc-------CCCceEEeecCCH
Confidence            4678999997 779999999999763 23             66677 544444444332       2567889999987


Q ss_pred             chHHHHHHHHHHHHHhCCCCEEEEcCCC
Q 024517           69 REGAFDEAVDKACQILGNLDAFVHCYTY   96 (266)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~li~~ag~   96 (266)
                      +  ++.++++       .+|+||++...
T Consensus       640 e--~L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        640 E--SLLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             H--HHHHhhc-------CCCEEEECCCc
Confidence            7  6555553       58999999865

>PRK06487 glycerate dehydrogenase; Provisional

Probab=95.81  E-value=0.042  Score=47.19  Aligned_cols=89  Identities=15%  Similarity=0.038  Sum_probs=53.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHH-HHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSV-AEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++.||++.|.|-+ .||+++|+.+...|++|+..++....... ...+.+..+ ..++..+.+.++.    +.+.++++-
T Consensus       145 ~l~gktvgIiG~G-~IG~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell~-~sDiv~l~lPlt~----~T~~li~~~  218 (317)
T PRK06487        145 ELEGKTLGLLGHG-ELGGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELLP-QVDALTLHCPLTE----HTRHLIGAR  218 (317)
T ss_pred             ccCCCEEEEECCC-HHHHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHHH-hCCEEEECCCCCh----HHhcCcCHH
Confidence            4789999999985 59999999999999999987732111000 001111111 1567777776665    344555442


Q ss_pred             HHHhCCCCEEEEcCCC
Q 024517           81 CQILGNLDAFVHCYTY   96 (266)
Q Consensus        81 ~~~~g~id~li~~ag~   96 (266)
                      .=..-+.+.++-|.+.
T Consensus       219 ~~~~mk~ga~lIN~aR  234 (317)
T PRK06487        219 ELALMKPGALLINTAR  234 (317)
T ss_pred             HHhcCCCCeEEEECCC
Confidence            2111245666666655

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.81  E-value=0.18  Score=43.26  Aligned_cols=88  Identities=13%  Similarity=0.089  Sum_probs=53.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHH---H--HHHHhcccCCCCCeEEEEEecCCCchHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSS---V--AEKMMGSLKGGQPVEVVGLDMEEDREGAFDE   75 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~---~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~   75 (266)
                      .+++|++.|.|-+. ||+.+|+.|...|++|+..+ +.+....   .  ...+.+..+ ..++.++.+.++.    +.+.
T Consensus       133 ~l~g~tvgIvG~G~-IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~-~aDvvv~~lPlt~----~T~~  206 (312)
T PRK15469        133 HREDFTIGILGAGV-LGSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLS-QTRVLINLLPNTP----ETVG  206 (312)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHh-cCCEEEECCCCCH----HHHH
Confidence            46899999998765 99999999999999999887 3322110   0  011211111 2455555555554    5666


Q ss_pred             HHHH-HHHHhCCCCEEEEcCCC
Q 024517           76 AVDK-ACQILGNLDAFVHCYTY   96 (266)
Q Consensus        76 ~~~~-~~~~~g~id~li~~ag~   96 (266)
                      ++++ ..+.. +.+.++-|.|.
T Consensus       207 li~~~~l~~m-k~ga~lIN~aR  227 (312)
T PRK15469        207 IINQQLLEQL-PDGAYLLNLAR  227 (312)
T ss_pred             HhHHHHHhcC-CCCcEEEECCC
Confidence            6653 22333 45666666655

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.78  E-value=0.16  Score=44.04  Aligned_cols=35  Identities=14%  Similarity=0.162  Sum_probs=31.4

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      ++.||++.|.|- |.||+.+|+.|...|++|+..++
T Consensus       147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~  181 (333)
T PRK13243        147 DVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSR  181 (333)
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECC
Confidence            478999999998 66999999999999999998873

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=95.77  E-value=0.018  Score=52.40  Aligned_cols=44  Identities=20%  Similarity=0.318  Sum_probs=35.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAE   46 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~   46 (266)
                      ++++|+++|+|+ ||+|++++..|.+.|++|++++ +.++.+++.+
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~  373 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALAS  373 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            357899999996 6999999999999999998888 4444444443

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=95.76  E-value=0.2  Score=44.20  Aligned_cols=116  Identities=16%  Similarity=0.199  Sum_probs=70.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-e----EE--EE--e-cccccHHHHHHHhccc-CCCCCeEEEEEecCCCchHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC-R----LV--LV--G-NERRLSSVAEKMMGSL-KGGQPVEVVGLDMEEDREGAFDE   75 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~-~----v~--~~--~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~v~~   75 (266)
                      +|.|+|++|.+|.++|..++..|. .    ++  +.  + +.++++..+..+.... +-..++     -++..+      
T Consensus        46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v-----~i~~~~------  114 (387)
T TIGR01757        46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREV-----SIGIDP------  114 (387)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCce-----EEecCC------
Confidence            689999999999999999998875 3    33  34  6 7777777776665432 110111     111111      


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhc-cCCCCeEEEEeccc
Q 024517           76 AVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE-SKAGGSIVFLTSII  149 (266)
Q Consensus        76 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~g~iv~iss~~  149 (266)
                       .+    .+..-|++|..||..  ..+  ..+.   ...+..|    ..+++.+.+.+.+ .++.+.++.+|.+.
T Consensus       115 -y~----~~kdaDIVVitAG~p--rkp--g~tR---~dll~~N----~~I~k~i~~~I~~~a~~~~iviVVsNPv  173 (387)
T TIGR01757       115 -YE----VFEDADWALLIGAKP--RGP--GMER---ADLLDIN----GQIFADQGKALNAVASKNCKVLVVGNPC  173 (387)
T ss_pred             -HH----HhCCCCEEEECCCCC--CCC--CCCH---HHHHHHH----HHHHHHHHHHHHHhCCCCeEEEEcCCcH
Confidence             11    224789999999872  222  2333   3333333    4566777777666 32367888888643

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.73  E-value=0.026  Score=47.35  Aligned_cols=35  Identities=17%  Similarity=0.322  Sum_probs=33.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      +++||+++|.|.+.-+|+.++..|.++|+.|.++.
T Consensus       154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~h  188 (285)
T PRK14191        154 EIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCH  188 (285)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEe
Confidence            47899999999999999999999999999999987

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.69  E-value=0.045  Score=46.31  Aligned_cols=41  Identities=15%  Similarity=0.259  Sum_probs=35.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLS   42 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~   42 (266)
                      ++.||++.|.|.++-+|+.++..|.++|++|.++. +...++
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~  197 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAK  197 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHH
Confidence            57899999999999999999999999999999997 444333

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.68  E-value=0.075  Score=46.64  Aligned_cols=33  Identities=24%  Similarity=0.347  Sum_probs=28.8

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG   36 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~   36 (266)
                      +++++|+|.|++ |+|..+++.|+..|. ++.++|
T Consensus        39 l~~~~VliiG~G-glG~~v~~~La~~Gvg~i~ivD   72 (370)
T PRK05600         39 LHNARVLVIGAG-GLGCPAMQSLASAGVGTITLID   72 (370)
T ss_pred             hcCCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEe
Confidence            567889999876 599999999999998 788887

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.65  E-value=0.021  Score=41.05  Aligned_cols=70  Identities=24%  Similarity=0.349  Sum_probs=46.6

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      ++|.|.+ .+|+.+++.|.+.+.+|++++ +++..+    ++.+.     .+.++..|.++++  ..+++      ...+
T Consensus         1 vvI~G~g-~~~~~i~~~L~~~~~~vvvid~d~~~~~----~~~~~-----~~~~i~gd~~~~~--~l~~a------~i~~   62 (116)
T PF02254_consen    1 VVIIGYG-RIGREIAEQLKEGGIDVVVIDRDPERVE----ELREE-----GVEVIYGDATDPE--VLERA------GIEK   62 (116)
T ss_dssp             EEEES-S-HHHHHHHHHHHHTTSEEEEEESSHHHHH----HHHHT-----TSEEEES-TTSHH--HHHHT------TGGC
T ss_pred             eEEEcCC-HHHHHHHHHHHhCCCEEEEEECCcHHHH----HHHhc-----ccccccccchhhh--HHhhc------Cccc
Confidence            4677775 599999999999777999998 544433    33322     3678889999977  33332      1236


Q ss_pred             CCEEEEcCC
Q 024517           87 LDAFVHCYT   95 (266)
Q Consensus        87 id~li~~ag   95 (266)
                      .+.++....
T Consensus        63 a~~vv~~~~   71 (116)
T PF02254_consen   63 ADAVVILTD   71 (116)
T ss_dssp             ESEEEEESS
T ss_pred             cCEEEEccC
Confidence            777777754

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK06932 glycerate dehydrogenase; Provisional

Probab=95.65  E-value=0.13  Score=44.14  Aligned_cols=85  Identities=8%  Similarity=0.105  Sum_probs=52.4

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccc------cHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERR------LSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDE   75 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~   75 (266)
                      ++.||++.|.|-+ .||+++|+.+...|++|+..++...      ..++.+.+.     ..++..+.+.++.    +.+.
T Consensus       144 ~l~gktvgIiG~G-~IG~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell~-----~sDiv~l~~Plt~----~T~~  213 (314)
T PRK06932        144 DVRGSTLGVFGKG-CLGTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVLK-----QADIVTLHCPLTE----TTQN  213 (314)
T ss_pred             ccCCCEEEEECCC-HHHHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHHH-----hCCEEEEcCCCCh----HHhc
Confidence            4789999999984 5999999999999999988763211      011112221     1577777777665    3344


Q ss_pred             HHHHHHHHhCCCCEEEEcCCC
Q 024517           76 AVDKACQILGNLDAFVHCYTY   96 (266)
Q Consensus        76 ~~~~~~~~~g~id~li~~ag~   96 (266)
                      ++++-.=..-+.+.++-|.+.
T Consensus       214 li~~~~l~~mk~ga~lIN~aR  234 (314)
T PRK06932        214 LINAETLALMKPTAFLINTGR  234 (314)
T ss_pred             ccCHHHHHhCCCCeEEEECCC
Confidence            544322111245666666654

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.63  E-value=0.079  Score=42.21  Aligned_cols=33  Identities=24%  Similarity=0.341  Sum_probs=28.2

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG   36 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~   36 (266)
                      +++++|+|.|+++ +|..+++.|+..|. ++.++|
T Consensus        19 L~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD   52 (197)
T cd01492          19 LRSARILLIGLKG-LGAEIAKNLVLSGIGSLTILD   52 (197)
T ss_pred             HHhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEE
Confidence            5678899997655 99999999999999 687887

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PLN02928 oxidoreductase family protein

Probab=95.63  E-value=0.13  Score=44.70  Aligned_cols=35  Identities=20%  Similarity=0.201  Sum_probs=31.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      ++.||++.|.|- |.||+.+|+.+...|++|+..++
T Consensus       156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr  190 (347)
T PLN02928        156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRR  190 (347)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECC
Confidence            478999999998 55999999999999999998874

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=95.57  E-value=0.24  Score=43.00  Aligned_cols=38  Identities=11%  Similarity=0.237  Sum_probs=31.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLS   42 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~   42 (266)
                      .+++++|.|+ +++|..+++.+...|++|++++ ++++++
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~  204 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLE  204 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHH
Confidence            4789999999 9999999999989999988887 544443

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=95.57  E-value=0.16  Score=43.70  Aligned_cols=88  Identities=9%  Similarity=0.060  Sum_probs=57.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHH-------HhcccCCCCCeEEEEEecCCCchHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEK-------MMGSLKGGQPVEVVGLDMEEDREGAFD   74 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~v~   74 (266)
                      +++||++-|.|-++ ||+++|+++...|++|+..++... .+..++       +.+... ..++..+.|.++.    +..
T Consensus       143 ~l~gktvGIiG~Gr-IG~avA~r~~~Fgm~v~y~~~~~~-~~~~~~~~~~y~~l~ell~-~sDii~l~~Plt~----~T~  215 (324)
T COG1052         143 DLRGKTLGIIGLGR-IGQAVARRLKGFGMKVLYYDRSPN-PEAEKELGARYVDLDELLA-ESDIISLHCPLTP----ETR  215 (324)
T ss_pred             CCCCCEEEEECCCH-HHHHHHHHHhcCCCEEEEECCCCC-hHHHhhcCceeccHHHHHH-hCCEEEEeCCCCh----HHh
Confidence            47899999998766 999999999988999998883332 111111       111111 2578888888776    446


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCC
Q 024517           75 EAVDKACQILGNLDAFVHCYTY   96 (266)
Q Consensus        75 ~~~~~~~~~~g~id~li~~ag~   96 (266)
                      .++++-.=..-+..+++-|.+.
T Consensus       216 hLin~~~l~~mk~ga~lVNtaR  237 (324)
T COG1052         216 HLINAEELAKMKPGAILVNTAR  237 (324)
T ss_pred             hhcCHHHHHhCCCCeEEEECCC
Confidence            6666533222356666666665

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.56  E-value=0.11  Score=44.95  Aligned_cols=88  Identities=11%  Similarity=0.034  Sum_probs=52.4

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHH---HHhcccCCCCCeEEEEEecCCCchHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAE---KMMGSLKGGQPVEVVGLDMEEDREGAFDEAV   77 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~   77 (266)
                      .++|+++.|.|.+. ||+++|+.|...|++|+..+ +.+.......   .+.+... ..++.++.+..+.    +...++
T Consensus       143 ~l~g~~VgIIG~G~-IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~-~aDiVil~lP~t~----~t~~li  216 (330)
T PRK12480        143 PVKNMTVAIIGTGR-IGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIK-DADIISLHVPANK----ESYHLF  216 (330)
T ss_pred             ccCCCEEEEECCCH-HHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHh-cCCEEEEeCCCcH----HHHHHH
Confidence            36889999998755 99999999999999999988 4332211110   1111111 2466666655544    444455


Q ss_pred             HH-HHHHhCCCCEEEEcCCC
Q 024517           78 DK-ACQILGNLDAFVHCYTY   96 (266)
Q Consensus        78 ~~-~~~~~g~id~li~~ag~   96 (266)
                      .+ ..+. -+.+.++-|++.
T Consensus       217 ~~~~l~~-mk~gavlIN~aR  235 (330)
T PRK12480        217 DKAMFDH-VKKGAILVNAAR  235 (330)
T ss_pred             hHHHHhc-CCCCcEEEEcCC
Confidence            43 2222 245666666654

>PLN02306 hydroxypyruvate reductase

Probab=95.55  E-value=0.19  Score=44.36  Aligned_cols=34  Identities=15%  Similarity=0.085  Sum_probs=30.0

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHH-HcCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLA-KRGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~-~~g~~v~~~~   36 (266)
                      +++||++.|.|-+. ||+++|+.+. ..|++|+..+
T Consensus       162 ~L~gktvGIiG~G~-IG~~vA~~l~~~fGm~V~~~d  196 (386)
T PLN02306        162 LLKGQTVGVIGAGR-IGSAYARMMVEGFKMNLIYYD  196 (386)
T ss_pred             CCCCCEEEEECCCH-HHHHHHHHHHhcCCCEEEEEC
Confidence            47899999998766 9999999986 7899999887

>PRK06223 malate dehydrogenase; Reviewed

Probab=95.55  E-value=0.29  Score=41.83  Aligned_cols=118  Identities=14%  Similarity=0.202  Sum_probs=66.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccC-CCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLK-GGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +++.|+|+ |.+|..++..++.+|. +|++.| +++.++.....+..... .....     .++...  +.    +.   
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~-----~i~~~~--d~----~~---   67 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDT-----KITGTN--DY----ED---   67 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCc-----EEEeCC--CH----HH---
Confidence            47899999 7799999999999875 899999 66665444433322211 00111     111111  11    11   


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                       +..-|++|.++|.. . .+  ..+.   ...+.    ...-+.+.+.+.+.+...++.+++++.+..
T Consensus        68 -~~~aDiVii~~~~p-~-~~--~~~r---~~~~~----~n~~i~~~i~~~i~~~~~~~~viv~tNP~d  123 (307)
T PRK06223         68 -IAGSDVVVITAGVP-R-KP--GMSR---DDLLG----INAKIMKDVAEGIKKYAPDAIVIVVTNPVD  123 (307)
T ss_pred             -HCCCCEEEECCCCC-C-Cc--CCCH---HHHHH----HHHHHHHHHHHHHHHHCCCeEEEEecCcHH
Confidence             24679999999862 2 21  2222   22222    334556666666655543577888876543

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.54  E-value=0.094  Score=43.16  Aligned_cols=33  Identities=30%  Similarity=0.364  Sum_probs=28.3

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG   36 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~   36 (266)
                      +++++|+|.|++ |+|..+++.|+..|. +++++|
T Consensus        22 L~~~~VlvvG~G-glGs~va~~La~~Gvg~i~lvD   55 (240)
T TIGR02355        22 LKASRVLIVGLG-GLGCAASQYLAAAGVGNLTLLD   55 (240)
T ss_pred             HhCCcEEEECcC-HHHHHHHHHHHHcCCCEEEEEe
Confidence            567889999876 599999999999998 777776

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=95.51  E-value=0.043  Score=46.49  Aligned_cols=33  Identities=15%  Similarity=0.189  Sum_probs=30.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      ++++++|+|+++++|.++++.+...|++|+++.
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~  171 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTA  171 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEe
Confidence            578999999999999999999999999998887

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PLN03139 formate dehydrogenase; Provisional

Probab=95.51  E-value=0.18  Score=44.53  Aligned_cols=35  Identities=17%  Similarity=0.222  Sum_probs=31.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      ++.||++.|.|- |.||+.+++.|...|++|+..++
T Consensus       196 ~L~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~  230 (386)
T PLN03139        196 DLEGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDR  230 (386)
T ss_pred             CCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECC
Confidence            478999999995 56999999999999999988873

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.49  E-value=0.081  Score=47.31  Aligned_cols=44  Identities=23%  Similarity=0.440  Sum_probs=34.9

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcC-CeEEEEe-cccccHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRG-CRLVLVG-NERRLSSVAEK   47 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g-~~v~~~~-~~~~~~~~~~~   47 (266)
                      +.+++++|.|+ |.+|..+++.|...| .+|++++ +.++.++.++.
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~  223 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKE  223 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            67899999997 889999999999999 5788888 44544545444

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.46  E-value=0.036  Score=46.90  Aligned_cols=41  Identities=12%  Similarity=0.186  Sum_probs=35.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLS   42 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~   42 (266)
                      +++||+++|.|-++-+|+.+|..|.++|+.|.++. +...++
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~  196 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLP  196 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHH
Confidence            47899999999999999999999999999999996 544433

>PRK05442 malate dehydrogenase; Provisional

Probab=95.46  E-value=0.13  Score=44.37  Aligned_cols=119  Identities=15%  Similarity=0.143  Sum_probs=69.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-------eEEEEe-ccc--ccHHHHHHHhccc-CCCCCeEEEEEecCCCchHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-------RLVLVG-NER--RLSSVAEKMMGSL-KGGQPVEVVGLDMEEDREGA   72 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-------~v~~~~-~~~--~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~   72 (266)
                      +-+++.|+|++|.+|..++..++..+.       .+++.| ++.  +++..+..+.... +-..++.     ++. +   
T Consensus         3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~-----i~~-~---   73 (326)
T PRK05442          3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVV-----ITD-D---   73 (326)
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcE-----Eec-C---
Confidence            345789999999999999999998765       588888 432  2343333333221 1001111     111 1   


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC-CCCeEEEEeccc
Q 024517           73 FDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK-AGGSIVFLTSII  149 (266)
Q Consensus        73 v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~iv~iss~~  149 (266)
                             .-+.+..-|++|-+||..  ..+  ..+.   ...+..|    ..+++.+.+.+.+.. +.+.++.+|.+.
T Consensus        74 -------~y~~~~daDiVVitaG~~--~k~--g~tR---~dll~~N----a~i~~~i~~~i~~~~~~~~iiivvsNPv  133 (326)
T PRK05442         74 -------PNVAFKDADVALLVGARP--RGP--GMER---KDLLEAN----GAIFTAQGKALNEVAARDVKVLVVGNPA  133 (326)
T ss_pred             -------hHHHhCCCCEEEEeCCCC--CCC--CCcH---HHHHHHH----HHHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence                   112234689999999862  221  2333   3333333    456777777776633 368888888643

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.44  E-value=0.055  Score=48.77  Aligned_cols=37  Identities=14%  Similarity=0.393  Sum_probs=30.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSV   44 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~   44 (266)
                      +++|.|+ |.+|+++++.|.++|+.|++++ +++..++.
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~   39 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRL   39 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHH
Confidence            5788887 7899999999999999999998 55554443

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=95.41  E-value=0.1  Score=48.60  Aligned_cols=33  Identities=27%  Similarity=0.377  Sum_probs=28.5

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG   36 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~   36 (266)
                      +++.+|||.|+++ +|..+++.|+..|. ++.++|
T Consensus       336 L~~~kVLIvGaGG-LGs~VA~~La~~GVg~ItlVD  369 (664)
T TIGR01381       336 YSQLKVLLLGAGT-LGCNVARCLIGWGVRHITFVD  369 (664)
T ss_pred             HhcCeEEEECCcH-HHHHHHHHHHHcCCCeEEEEc
Confidence            4678899999866 99999999999999 777776

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=95.40  E-value=0.053  Score=48.56  Aligned_cols=44  Identities=27%  Similarity=0.463  Sum_probs=35.1

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEK   47 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~   47 (266)
                      +.+++++|.|+ |.+|..+++.|...|+ +|++++ +.++.+++++.
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~  225 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE  225 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence            67899999987 7899999999999998 788887 54555555544

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.36  E-value=0.057  Score=39.74  Aligned_cols=87  Identities=16%  Similarity=0.127  Sum_probs=50.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEe-ccc-ccHHHHHHHhccc-----CCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NER-RLSSVAEKMMGSL-----KGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++-|.|+ |.+|.++++.|.+.|+.|..+. +.. ..+.....+....     .--.+..++.+-+.|.   .+..++++
T Consensus        12 ~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd---aI~~va~~   87 (127)
T PF10727_consen   12 KIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD---AIAEVAEQ   87 (127)
T ss_dssp             EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC---HHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH---HHHHHHHH
Confidence            5788888 5599999999999999998876 433 3333333321110     0012344555555554   57788887


Q ss_pred             HHHH--hCCCCEEEEcCCCC
Q 024517           80 ACQI--LGNLDAFVHCYTYE   97 (266)
Q Consensus        80 ~~~~--~g~id~li~~ag~~   97 (266)
                      +...  +.+=.+++|+.|..
T Consensus        88 La~~~~~~~g~iVvHtSGa~  107 (127)
T PF10727_consen   88 LAQYGAWRPGQIVVHTSGAL  107 (127)
T ss_dssp             HHCC--S-TT-EEEES-SS-
T ss_pred             HHHhccCCCCcEEEECCCCC
Confidence            7654  32336899999863

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK07574 formate dehydrogenase; Provisional

Probab=95.35  E-value=0.2  Score=44.22  Aligned_cols=35  Identities=14%  Similarity=0.143  Sum_probs=31.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      +++||++.|.|-+. ||+.+|+.|...|++|+..++
T Consensus       189 ~L~gktVGIvG~G~-IG~~vA~~l~~fG~~V~~~dr  223 (385)
T PRK07574        189 DLEGMTVGIVGAGR-IGLAVLRRLKPFDVKLHYTDR  223 (385)
T ss_pred             ecCCCEEEEECCCH-HHHHHHHHHHhCCCEEEEECC
Confidence            47899999999855 999999999999999998884

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.35  E-value=0.034  Score=43.63  Aligned_cols=43  Identities=16%  Similarity=0.306  Sum_probs=34.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhc
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMG   50 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~   50 (266)
                      +|.|.|+ |-+|+.+|..|+..|++|++.+ +++.+++..+.+..
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            4778888 6699999999999999999999 77777766666654

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=95.34  E-value=0.22  Score=44.36  Aligned_cols=89  Identities=13%  Similarity=0.103  Sum_probs=54.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccH----HHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLS----SVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAV   77 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~   77 (266)
                      ++.||++.|.|-+ .||+.+|+.+...|++|+..++.....    .....+.+... ..++..+.+.++.    +.+.++
T Consensus       148 ~L~gktvGIiG~G-~IG~~vA~~~~~fGm~V~~~d~~~~~~~~~~~~~~~l~ell~-~sDiVslh~Plt~----~T~~li  221 (409)
T PRK11790        148 EVRGKTLGIVGYG-HIGTQLSVLAESLGMRVYFYDIEDKLPLGNARQVGSLEELLA-QSDVVSLHVPETP----STKNMI  221 (409)
T ss_pred             cCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEECCCcccccCCceecCCHHHHHh-hCCEEEEcCCCCh----HHhhcc
Confidence            4789999999985 599999999999999999888321110    00001111111 1577777776665    455666


Q ss_pred             HHHHHHhCCCCEEEEcCCC
Q 024517           78 DKACQILGNLDAFVHCYTY   96 (266)
Q Consensus        78 ~~~~~~~g~id~li~~ag~   96 (266)
                      ++-.=..-+.+.++-|.+.
T Consensus       222 ~~~~l~~mk~ga~lIN~aR  240 (409)
T PRK11790        222 GAEELALMKPGAILINASR  240 (409)
T ss_pred             CHHHHhcCCCCeEEEECCC
Confidence            4432111245666666554

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.33  E-value=0.046  Score=45.78  Aligned_cols=41  Identities=15%  Similarity=0.188  Sum_probs=35.6

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLS   42 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~   42 (266)
                      +++||+++|.|.|.-+|+-++..|.++|+.|.++. ..+.+.
T Consensus       154 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~  195 (281)
T PRK14183        154 DVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLK  195 (281)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHH
Confidence            57899999999999999999999999999999887 443333

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=95.31  E-value=0.25  Score=42.56  Aligned_cols=88  Identities=7%  Similarity=-0.034  Sum_probs=51.7

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHH-HcCCeEEEEecccccHHHH------HHHhcccCCCCCeEEEEEecCCCchHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLA-KRGCRLVLVGNERRLSSVA------EKMMGSLKGGQPVEVVGLDMEEDREGAFD   74 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~-~~g~~v~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~D~~~~~~~~v~   74 (266)
                      ++.||++.|.|- |.||+++|+.+. ..|++|+..++....+...      ..+.+... ..++..+.+.++.    +.+
T Consensus       142 ~L~gktvGIiG~-G~IG~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~~~~~~l~ell~-~sDvv~lh~plt~----~T~  215 (323)
T PRK15409        142 DVHHKTLGIVGM-GRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQ-ESDFVCIILPLTD----ETH  215 (323)
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHhcCCCEEEEECCCCchhhHHhcCcEecCHHHHHH-hCCEEEEeCCCCh----HHh
Confidence            478999999998 459999999997 7899998776321111000      01111111 2566777766665    344


Q ss_pred             HHHHHH-HHHhCCCCEEEEcCCC
Q 024517           75 EAVDKA-CQILGNLDAFVHCYTY   96 (266)
Q Consensus        75 ~~~~~~-~~~~g~id~li~~ag~   96 (266)
                      .++++- .+. -+.+.++-|.+.
T Consensus       216 ~li~~~~l~~-mk~ga~lIN~aR  237 (323)
T PRK15409        216 HLFGAEQFAK-MKSSAIFINAGR  237 (323)
T ss_pred             hccCHHHHhc-CCCCeEEEECCC
Confidence            555432 222 245666666554

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.30  E-value=0.046  Score=45.90  Aligned_cols=41  Identities=15%  Similarity=0.296  Sum_probs=35.6

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLS   42 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~   42 (266)
                      +++||+++|.|.+.-+|+.++..|.++|++|.++. +...+.
T Consensus       155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~  196 (285)
T PRK14189        155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLA  196 (285)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHH
Confidence            47899999999999999999999999999999987 443333

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=95.29  E-value=0.51  Score=38.43  Aligned_cols=123  Identities=21%  Similarity=0.276  Sum_probs=74.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +.|+.+|=.|.++|   -+++.+++.|+.|..+| +++..+.......+.   +..     +|-.       ...++++.
T Consensus        58 l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~---gv~-----i~y~-------~~~~edl~  119 (243)
T COG2227          58 LPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALES---GVN-----IDYR-------QATVEDLA  119 (243)
T ss_pred             CCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhc---ccc-----ccch-------hhhHHHHH
Confidence            67899999999998   79999999999999999 766655544333221   111     2222       22344444


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +..+++|+|++.--. .+..     +              +-.+.+.+...++    ++-++++|.+.       ....+
T Consensus       120 ~~~~~FDvV~cmEVl-EHv~-----d--------------p~~~~~~c~~lvk----P~G~lf~STin-------rt~ka  168 (243)
T COG2227         120 SAGGQFDVVTCMEVL-EHVP-----D--------------PESFLRACAKLVK----PGGILFLSTIN-------RTLKA  168 (243)
T ss_pred             hcCCCccEEEEhhHH-HccC-----C--------------HHHHHHHHHHHcC----CCcEEEEeccc-------cCHHH
Confidence            444789999988443 2211     1              1224455555443    57888888864       33445


Q ss_pred             hHHhHHHHHHHHH
Q 024517          162 YGACAASIHQLVR  174 (266)
Q Consensus       162 y~~sK~a~~~~~~  174 (266)
                      |..+-...+.+.+
T Consensus       169 ~~~~i~~ae~vl~  181 (243)
T COG2227         169 YLLAIIGAEYVLR  181 (243)
T ss_pred             HHHHHHHHHHHHH
Confidence            5555444444443

>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.28  E-value=0.4  Score=43.91  Aligned_cols=128  Identities=15%  Similarity=0.066  Sum_probs=69.9

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      |++++|+++|.|.+ +.|.++|+.|.++|++|.+.|...... ..+.+.+.   +..+.+..   .+..    ...+   
T Consensus         3 ~~~~~~~i~v~G~G-~sG~s~a~~L~~~G~~v~~~D~~~~~~-~~~~L~~~---~~~~~~~~---g~~~----~~~~---   67 (498)
T PRK02006          3 GDLQGPMVLVLGLG-ESGLAMARWCARHGARLRVADTREAPP-NLAALRAE---LPDAEFVG---GPFD----PALL---   67 (498)
T ss_pred             cccCCCEEEEEeec-HhHHHHHHHHHHCCCEEEEEcCCCCch-hHHHHHhh---cCCcEEEe---CCCc----hhHh---
Confidence            56788999999966 589999999999999999988322221 12233322   11223322   2111    0112   


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHH--HHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccc
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKL--VKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGA  151 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~  151 (266)
                          ...|.+|...|+. +..   ......+...  ..+.+.+-..++..+++.+........+|-|+...|-
T Consensus        68 ----~~~d~vv~sp~I~-~~~---~~~~~~~~~a~~~~i~v~~~~e~~~~~~~~l~~~~~~~~~I~VTGTnGK  132 (498)
T PRK02006         68 ----DGVDLVALSPGLS-PLE---AALAPLVAAARERGIPVWGEIELFAQALAALGASGYAPKVLAITGTNGK  132 (498)
T ss_pred             ----cCCCEEEECCCCC-Ccc---cccCHHHHHHHHCCCcEEEHHHHHHHHHhhhccccCCCCEEEEECCCcH
Confidence                2479999998873 211   0011222222  2456666666655555444222112367777776653

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.27  E-value=0.049  Score=45.66  Aligned_cols=43  Identities=16%  Similarity=0.287  Sum_probs=37.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSV   44 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~   44 (266)
                      ++.||+++|.|-|.-+|+-++..|.++|+.|.++. +...+++.
T Consensus       156 ~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~  199 (284)
T PRK14177        156 DVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSI  199 (284)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence            57899999999999999999999999999999998 54444433

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.23  E-value=0.052  Score=45.39  Aligned_cols=42  Identities=14%  Similarity=0.278  Sum_probs=36.5

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSS   43 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~   43 (266)
                      +++||+++|.|-|.-+|+-++..|.++|++|.++. +...+.+
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~  197 (278)
T PRK14172        155 DIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKE  197 (278)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            57899999999999999999999999999999998 4444443

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.23  E-value=0.07  Score=42.80  Aligned_cols=34  Identities=26%  Similarity=0.415  Sum_probs=31.4

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      +++||++||.||+. +|..-++.|++.|++|.+++
T Consensus         6 ~l~gk~vlVvGgG~-va~rk~~~Ll~~ga~VtVvs   39 (205)
T TIGR01470         6 NLEGRAVLVVGGGD-VALRKARLLLKAGAQLRVIA   39 (205)
T ss_pred             EcCCCeEEEECcCH-HHHHHHHHHHHCCCEEEEEc
Confidence            57899999999877 89999999999999999988

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.21  E-value=0.054  Score=45.48  Aligned_cols=35  Identities=11%  Similarity=0.206  Sum_probs=33.4

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      +++||+++|.|.|.-+|+-++..|.++|++|.++.
T Consensus       155 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~ch  189 (284)
T PRK14190        155 DISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCH  189 (284)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEe
Confidence            57899999999999999999999999999999987

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.18  E-value=0.06  Score=45.23  Aligned_cols=41  Identities=10%  Similarity=0.319  Sum_probs=35.7

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLS   42 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~   42 (266)
                      ++.||+++|.|-+.-+|+.++..|.++|++|.++. +...++
T Consensus       156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~  197 (285)
T PRK10792        156 DTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLR  197 (285)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHH
Confidence            57899999999999999999999999999999998 443333

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.16  E-value=0.056  Score=45.42  Aligned_cols=42  Identities=17%  Similarity=0.259  Sum_probs=36.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSS   43 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~   43 (266)
                      +++||+++|.|.|.-+|+-++..|.++|++|.++. +...+++
T Consensus       152 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~  194 (287)
T PRK14173        152 PLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPA  194 (287)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            57899999999999999999999999999999998 4443433

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.16  E-value=0.17  Score=40.29  Aligned_cols=33  Identities=24%  Similarity=0.422  Sum_probs=28.5

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG   36 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~   36 (266)
                      +++.+|+|.|.++ +|..+++.|+..|. ++.++|
T Consensus        17 L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD   50 (198)
T cd01485          17 LRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVD   50 (198)
T ss_pred             HhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEE
Confidence            4677889998776 99999999999999 688887

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.15  E-value=0.12  Score=47.07  Aligned_cols=73  Identities=18%  Similarity=0.102  Sum_probs=47.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-ccc-ccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NER-RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++++++|.|+ |++|.++|+.|.++|++|.+++ +.. ......+.+.+.     .+.++..   ...  .        
T Consensus        14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~-----gv~~~~~---~~~--~--------   74 (480)
T PRK01438         14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEAL-----GATVRLG---PGP--T--------   74 (480)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc-----CCEEEEC---CCc--c--------
Confidence            56889999997 5599999999999999999998 432 222333444332     3333321   111  1        


Q ss_pred             HHHhCCCCEEEEcCCC
Q 024517           81 CQILGNLDAFVHCYTY   96 (266)
Q Consensus        81 ~~~~g~id~li~~ag~   96 (266)
                        .....|.+|.+.|+
T Consensus        75 --~~~~~D~Vv~s~Gi   88 (480)
T PRK01438         75 --LPEDTDLVVTSPGW   88 (480)
T ss_pred             --ccCCCCEEEECCCc
Confidence              01357999999887

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.15  E-value=0.1  Score=44.26  Aligned_cols=37  Identities=11%  Similarity=0.188  Sum_probs=32.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccc
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERR   40 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~   40 (266)
                      ++++++|+|+++++|.++++.+...|++|+.++ +.++
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~  181 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEK  181 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHH
Confidence            578999999999999999999999999999887 4433

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.11  E-value=0.044  Score=46.19  Aligned_cols=36  Identities=14%  Similarity=0.228  Sum_probs=32.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      +++||+++|.|.++-+|+.++..|.++|++|.++.+
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~  191 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHS  191 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence            468999999999998999999999999998888874

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.10  E-value=0.06  Score=45.15  Aligned_cols=42  Identities=10%  Similarity=0.126  Sum_probs=36.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSS   43 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~   43 (266)
                      +++||+++|.|.|.-+|+-++..|.++|++|.++. +...+.+
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~  197 (282)
T PRK14180        155 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKS  197 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHH
Confidence            57899999999999999999999999999999998 4443433

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=95.07  E-value=0.23  Score=42.81  Aligned_cols=87  Identities=13%  Similarity=0.112  Sum_probs=53.8

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHHH------HHHHhcccCCCCCeEEEEEecCCCchHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSV------AEKMMGSLKGGQPVEVVGLDMEEDREGAFD   74 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~   74 (266)
                      ++.||++-|.|.+. ||+++++++...|++|+..++ ..+....      ...+.+... ..++..+.+.+++.    .+
T Consensus       139 el~gkTvGIiG~G~-IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~-~sDiv~lh~PlT~e----T~  212 (324)
T COG0111         139 ELAGKTVGIIGLGR-IGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLA-EADILTLHLPLTPE----TR  212 (324)
T ss_pred             cccCCEEEEECCCH-HHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHh-hCCEEEEcCCCCcc----hh
Confidence            46799999999876 999999999999999999984 2221110      011111111 15778888888774    35


Q ss_pred             HHHHHHH-HHhCCCCEEEEcC
Q 024517           75 EAVDKAC-QILGNLDAFVHCY   94 (266)
Q Consensus        75 ~~~~~~~-~~~g~id~li~~a   94 (266)
                      .++++-. +...+=-++||++
T Consensus       213 g~i~~~~~a~MK~gailIN~a  233 (324)
T COG0111         213 GLINAEELAKMKPGAILINAA  233 (324)
T ss_pred             cccCHHHHhhCCCCeEEEECC
Confidence            5655422 2222223666665

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.07  E-value=0.063  Score=45.00  Aligned_cols=42  Identities=14%  Similarity=0.304  Sum_probs=36.5

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSS   43 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~   43 (266)
                      +++||+++|.|-|.-+|+-++..|.++|++|.++. +...+++
T Consensus       153 ~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~  195 (282)
T PRK14169        153 DVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQ  195 (282)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHH
Confidence            47899999999999999999999999999999997 5444443

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.06  E-value=0.062  Score=45.09  Aligned_cols=42  Identities=14%  Similarity=0.272  Sum_probs=36.5

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSS   43 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~   43 (266)
                      ++.||+++|.|-|.=+|+-++..|.+++++|.++. +...+++
T Consensus       154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~  196 (284)
T PRK14170        154 QIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQ  196 (284)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            57899999999999999999999999999999998 4444443

>PLN00203 glutamyl-tRNA reductase

Probab=95.05  E-value=0.13  Score=47.13  Aligned_cols=45  Identities=29%  Similarity=0.636  Sum_probs=36.2

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKM   48 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~   48 (266)
                      +.+++++|.|+ |.+|..+++.|...|+ +|+++. +.++.+++.+++
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~  310 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF  310 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence            67899999999 8899999999999997 688887 555555555443

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.04  E-value=0.18  Score=44.25  Aligned_cols=79  Identities=14%  Similarity=0.246  Sum_probs=48.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .+.++||+|+ ++||...++.+...|+ +|+.++ +.++++ .++++      +...   ..|..+.++ .+.+.+.++.
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~-~a~~~------Ga~~---~i~~~~~~~-~~~~~v~~~~  252 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFE-LAKKL------GATD---CVNPNDYDK-PIQEVIVEIT  252 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HHHHh------CCCe---EEcccccch-hHHHHHHHHh
Confidence            4789999975 8999999998888899 788887 444433 33333      2221   223332110 2333333322


Q ss_pred             HHhCCCCEEEEcCCC
Q 024517           82 QILGNLDAFVHCYTY   96 (266)
Q Consensus        82 ~~~g~id~li~~ag~   96 (266)
                      .  +.+|+++.++|.
T Consensus       253 ~--~g~d~vid~~G~  265 (368)
T TIGR02818       253 D--GGVDYSFECIGN  265 (368)
T ss_pred             C--CCCCEEEECCCC
Confidence            2  369999999874

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.02  E-value=0.063  Score=45.14  Aligned_cols=43  Identities=21%  Similarity=0.383  Sum_probs=37.0

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSV   44 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~   44 (266)
                      +++||+++|.|-|.=+|+-++..|.++++.|.++. +...+.+.
T Consensus       156 ~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~~~  199 (288)
T PRK14171        156 NLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLSSI  199 (288)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence            57899999999999999999999999999999998 54444443

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.00  E-value=0.11  Score=44.58  Aligned_cols=45  Identities=24%  Similarity=0.416  Sum_probs=34.9

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKM   48 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~   48 (266)
                      +.+++++|.|+ |.+|..+++.|...|. +|++++ +.++.+++++++
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~  222 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL  222 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc
Confidence            57899999988 7899999999999775 677777 445555655554

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.00  E-value=0.068  Score=44.92  Aligned_cols=41  Identities=15%  Similarity=0.241  Sum_probs=35.7

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLS   42 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~   42 (266)
                      ++.||+++|.|-+.-+|+-++..|.++|++|.++. +...+.
T Consensus       161 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~  202 (287)
T PRK14176        161 DIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLK  202 (287)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHH
Confidence            47899999999999999999999999999999998 443333

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.99  E-value=0.067  Score=45.23  Aligned_cols=44  Identities=14%  Similarity=0.256  Sum_probs=37.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVA   45 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~   45 (266)
                      +++||+++|.|-|.=+|+-++..|.++|++|.++. +...+++..
T Consensus       155 ~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~  199 (297)
T PRK14186        155 DIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASIT  199 (297)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHH
Confidence            57899999999999999999999999999999998 444444433

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.99  E-value=0.06  Score=45.22  Aligned_cols=35  Identities=17%  Similarity=0.259  Sum_probs=33.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      ++.||+++|.|-|+-+|+.++..|.++|++|.++.
T Consensus       155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~  189 (284)
T PRK14179        155 ELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTH  189 (284)
T ss_pred             CCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEEC
Confidence            47899999999999999999999999999999986

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=94.98  E-value=0.17  Score=43.33  Aligned_cols=29  Identities=17%  Similarity=0.324  Sum_probs=25.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-eEEEEe
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC-RLVLVG   36 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~-~v~~~~   36 (266)
                      +|+|.|+ ||+|..+++.|+..|. ++.++|
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD   30 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIID   30 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEc
Confidence            3788886 6799999999999998 777877

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=94.97  E-value=0.095  Score=45.21  Aligned_cols=36  Identities=14%  Similarity=0.184  Sum_probs=29.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCe-EEEEe-cccc
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCR-LVLVG-NERR   40 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~-v~~~~-~~~~   40 (266)
                      .+.++||+|+ +++|..+++.+...|++ |++++ +.++
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~  200 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPER  200 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHH
Confidence            4789999976 89999999998899998 88887 4443

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=94.94  E-value=0.47  Score=42.07  Aligned_cols=116  Identities=20%  Similarity=0.267  Sum_probs=62.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .++++|| .|.++||..+++.+...|++++++. +.+...+.++++      +.  .  ..+.....  +..+.+.++..
T Consensus       185 ~g~~VlV-~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~------Ga--~--~v~~~~~~--~~~~~v~~~~~  251 (393)
T TIGR02819       185 PGSTVYI-AGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSF------GC--E--TVDLSKDA--TLPEQIEQILG  251 (393)
T ss_pred             CCCEEEE-ECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHc------CC--e--EEecCCcc--cHHHHHHHHcC
Confidence            4788999 4568999999998888899866554 333223333332      22  2  23333222  22222332211


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                       ...+|++|.++|.... +...+..    .       ...-..++.++..+++   +|+++.++..
T Consensus       252 -~~g~Dvvid~~G~~~~-~~~~~~~----~-------~~~~~~~~~~~~~~~~---~G~i~~~G~~  301 (393)
T TIGR02819       252 -EPEVDCAVDCVGFEAR-GHGHDGK----K-------EAPATVLNSLMEVTRV---GGAIGIPGLY  301 (393)
T ss_pred             -CCCCcEEEECCCCccc-ccccccc----c-------cchHHHHHHHHHHhhC---CCEEEEeeec
Confidence             1259999999986311 1000000    0       1222334455555554   6999999875

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=94.90  E-value=0.24  Score=41.65  Aligned_cols=102  Identities=15%  Similarity=0.232  Sum_probs=63.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +|++++|+||++.+|.-+-+--.-.||+|+... +.|+..-+..+    ++. ..+.    +--++.  .+.+++.+   
T Consensus       153 ~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~----~G~-d~af----NYK~e~--~~~~aL~r---  218 (343)
T KOG1196|consen  153 KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTK----FGF-DDAF----NYKEES--DLSAALKR---  218 (343)
T ss_pred             CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhc----cCC-ccce----eccCcc--CHHHHHHH---
Confidence            578999999999999866655555699999776 66554433322    221 1122    223332  34444444   


Q ss_pred             Hh-CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           83 IL-GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        83 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                      .+ ..||+.+-|+|..                           +..+.+..|+.   .|+|+.-+-++
T Consensus       219 ~~P~GIDiYfeNVGG~---------------------------~lDavl~nM~~---~gri~~CG~IS  256 (343)
T KOG1196|consen  219 CFPEGIDIYFENVGGK---------------------------MLDAVLLNMNL---HGRIAVCGMIS  256 (343)
T ss_pred             hCCCcceEEEeccCcH---------------------------HHHHHHHhhhh---ccceEeeeeeh
Confidence            34 3699999999871                           23455666766   47888766543

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=94.90  E-value=0.17  Score=36.99  Aligned_cols=78  Identities=15%  Similarity=0.176  Sum_probs=52.2

Q ss_pred             EEEEecCCCchHHHHHHHHHH-cCCeEEEEe-cccc--------------------cHHHHHHHhcccCCCCCeEEEEEe
Q 024517            7 RVLLTSDGDEISKNIAFHLAK-RGCRLVLVG-NERR--------------------LSSVAEKMMGSLKGGQPVEVVGLD   64 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~-~g~~v~~~~-~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~D   64 (266)
                      +++|.|.+|.+|+.+++.+.+ .+..++... +...                    ..++.+.+.       . .-+..|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~-------~-~DVvID   73 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLE-------E-ADVVID   73 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTT-------H--SEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcc-------c-CCEEEE
Confidence            589999999999999999999 577877654 4330                    011111111       1 225579


Q ss_pred             cCCCchHHHHHHHHHHHHHhCCCCEEEEcCCC
Q 024517           65 MEEDREGAFDEAVDKACQILGNLDAFVHCYTY   96 (266)
Q Consensus        65 ~~~~~~~~v~~~~~~~~~~~g~id~li~~ag~   96 (266)
                      +|.++  .+...++.+.++  ++.+++-..|+
T Consensus        74 fT~p~--~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   74 FTNPD--AVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             ES-HH--HHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             cCChH--HhHHHHHHHHhC--CCCEEEECCCC
Confidence            99988  888888888776  67788888776

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.85  E-value=0.077  Score=44.50  Aligned_cols=43  Identities=14%  Similarity=0.256  Sum_probs=36.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSV   44 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~   44 (266)
                      +++||+++|.|-|.-+|+-++..|.++++.|.++. +...+++.
T Consensus       154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~  197 (282)
T PRK14166        154 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLY  197 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence            47899999999999999999999999999999998 44444443

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=94.84  E-value=0.075  Score=44.93  Aligned_cols=43  Identities=12%  Similarity=0.209  Sum_probs=37.0

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSV   44 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~   44 (266)
                      +++||+++|.|-|.=+|+-++..|.++|++|.++. +...+++.
T Consensus       164 ~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~~  207 (299)
T PLN02516        164 PIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPESI  207 (299)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence            57899999999999999999999999999999998 44444443

>PRK06436 glycerate dehydrogenase; Provisional

Probab=94.83  E-value=0.36  Score=41.16  Aligned_cols=35  Identities=11%  Similarity=0.035  Sum_probs=30.6

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      .+.||++.|.|- |.||+++|+.+...|++|+..++
T Consensus       119 ~L~gktvgIiG~-G~IG~~vA~~l~afG~~V~~~~r  153 (303)
T PRK06436        119 LLYNKSLGILGY-GGIGRRVALLAKAFGMNIYAYTR  153 (303)
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECC
Confidence            478999999987 45999999988888999998883

>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]

Probab=94.83  E-value=0.5  Score=40.65  Aligned_cols=88  Identities=18%  Similarity=0.135  Sum_probs=52.4

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhccc------CCCCCeEEEEEecCCCchHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSL------KGGQPVEVVGLDMEEDREGAFD   74 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~D~~~~~~~~v~   74 (266)
                      ++.||++.|.|.++ ||+++|++|-..| ..+..+ |.....+...+.....      ....++.++.|.++.    +..
T Consensus       159 ~~~gK~vgilG~G~-IG~~ia~rL~~Fg-~~i~y~~r~~~~~~~~~~~~~~~~d~~~~~~~sD~ivv~~pLt~----~T~  232 (336)
T KOG0069|consen  159 DLEGKTVGILGLGR-IGKAIAKRLKPFG-CVILYHSRTQLPPEEAYEYYAEFVDIEELLANSDVIVVNCPLTK----ETR  232 (336)
T ss_pred             cccCCEEEEecCcH-HHHHHHHhhhhcc-ceeeeecccCCchhhHHHhcccccCHHHHHhhCCEEEEecCCCH----HHH
Confidence            46899999999877 9999999999999 544444 5444333332221110      112566676666665    556


Q ss_pred             HHHHH-HHHHhCCCCEEEEcCCC
Q 024517           75 EAVDK-ACQILGNLDAFVHCYTY   96 (266)
Q Consensus        75 ~~~~~-~~~~~g~id~li~~ag~   96 (266)
                      .++++ ..++. +-.+++-|.+.
T Consensus       233 ~liNk~~~~~m-k~g~vlVN~aR  254 (336)
T KOG0069|consen  233 HLINKKFIEKM-KDGAVLVNTAR  254 (336)
T ss_pred             HHhhHHHHHhc-CCCeEEEeccc
Confidence            66655 33333 34444444433

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.82  E-value=0.076  Score=44.79  Aligned_cols=42  Identities=17%  Similarity=0.283  Sum_probs=36.6

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSS   43 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~   43 (266)
                      +++||+++|.|-|.-+|+-++..|.+++++|.++. +...+.+
T Consensus       157 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~  199 (294)
T PRK14187        157 NLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLAD  199 (294)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHH
Confidence            57899999999999999999999999999999998 4444443

>PRK07411 hypothetical protein; Validated

Probab=94.76  E-value=0.17  Score=44.80  Aligned_cols=33  Identities=27%  Similarity=0.384  Sum_probs=28.4

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG   36 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~   36 (266)
                      |+..+|+|.|+++ +|..+++.|+..|. ++.++|
T Consensus        36 L~~~~VlivG~GG-lG~~va~~La~~Gvg~l~lvD   69 (390)
T PRK07411         36 LKAASVLCIGTGG-LGSPLLLYLAAAGIGRIGIVD   69 (390)
T ss_pred             HhcCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEC
Confidence            5678899998764 99999999999998 777776

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.75  E-value=0.091  Score=44.05  Aligned_cols=42  Identities=19%  Similarity=0.353  Sum_probs=36.5

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSS   43 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~   43 (266)
                      +++||+++|.|-|.=+|+-++..|.+++++|.++. +...+++
T Consensus       154 ~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~~  196 (282)
T PRK14182        154 DPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLAG  196 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            57899999999999999999999999999999998 4444443

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=94.73  E-value=0.31  Score=42.91  Aligned_cols=92  Identities=10%  Similarity=0.078  Sum_probs=53.5

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHH--HHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSS--VAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      +++||++.|.|.+. ||+.+++.+...|++|+..+. ....+.  ....+.+... ..++..+.+.++...+.....+++
T Consensus       113 ~l~gktvGIIG~G~-IG~~va~~l~a~G~~V~~~Dp~~~~~~~~~~~~~l~ell~-~aDiV~lh~Plt~~g~~~T~~li~  190 (381)
T PRK00257        113 DLAERTYGVVGAGH-VGGRLVRVLRGLGWKVLVCDPPRQEAEGDGDFVSLERILE-ECDVISLHTPLTKEGEHPTRHLLD  190 (381)
T ss_pred             CcCcCEEEEECCCH-HHHHHHHHHHHCCCEEEEECCcccccccCccccCHHHHHh-hCCEEEEeCcCCCCccccccccCC
Confidence            47899999999855 999999999999999999873 221110  0001111111 257788888887631112334443


Q ss_pred             H-HHHHhCCCCEEEEcCCC
Q 024517           79 K-ACQILGNLDAFVHCYTY   96 (266)
Q Consensus        79 ~-~~~~~g~id~li~~ag~   96 (266)
                      + ..+.+ +.+.++-|++.
T Consensus       191 ~~~l~~m-k~gailIN~aR  208 (381)
T PRK00257        191 EAFLASL-RPGAWLINASR  208 (381)
T ss_pred             HHHHhcC-CCCeEEEECCC
Confidence            3 22222 34555555544

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=94.72  E-value=0.17  Score=43.07  Aligned_cols=79  Identities=13%  Similarity=0.127  Sum_probs=49.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .+.+++|+|+++++|.++++.+...|++|+.++ +.++.+ ..+.+      +..  . ..|..+.+  ..+++.+..  
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~-~~~~~------g~~--~-~~~~~~~~--~~~~~~~~~--  207 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTA-LVRAL------GAD--V-AVDYTRPD--WPDQVREAL--  207 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHc------CCC--E-EEecCCcc--HHHHHHHHc--
Confidence            477899999999999999999999999998887 444332 22222      121  1 23444444  333322111  


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                      ...++|.++++.|.
T Consensus       208 ~~~~~d~vl~~~g~  221 (324)
T cd08244         208 GGGGVTVVLDGVGG  221 (324)
T ss_pred             CCCCceEEEECCCh
Confidence            11259999999764

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=94.71  E-value=0.081  Score=47.70  Aligned_cols=75  Identities=24%  Similarity=0.338  Sum_probs=52.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ..+.++|.|+ |.+|+.+++.|.++|.+|++++ +++..++..++.       ..+.++..|.++.+  ..+++      
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~-------~~~~~i~gd~~~~~--~L~~~------  293 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL-------PNTLVLHGDGTDQE--LLEEE------  293 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC-------CCCeEEECCCCCHH--HHHhc------
Confidence            4578999999 6799999999999999999998 655444433321       34567778888766  33222      


Q ss_pred             HhCCCCEEEEcC
Q 024517           83 ILGNLDAFVHCY   94 (266)
Q Consensus        83 ~~g~id~li~~a   94 (266)
                      ...+.|.+|.+.
T Consensus       294 ~~~~a~~vi~~~  305 (453)
T PRK09496        294 GIDEADAFIALT  305 (453)
T ss_pred             CCccCCEEEECC
Confidence            123577777654

>PLN02740 Alcohol dehydrogenase-like

Probab=94.70  E-value=0.21  Score=43.94  Aligned_cols=79  Identities=15%  Similarity=0.270  Sum_probs=48.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .|+++||.|+ +++|..+++.+...|+ +|+.++ +.++++ ..+++      +... +  .|..+.++ ...+.+.+..
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~-~a~~~------Ga~~-~--i~~~~~~~-~~~~~v~~~~  265 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFE-KGKEM------GITD-F--INPKDSDK-PVHERIREMT  265 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHH-HHHHc------CCcE-E--Eecccccc-hHHHHHHHHh
Confidence            4789999986 8999999998888999 588887 444433 33332      2221 2  24333210 2323333322


Q ss_pred             HHhCCCCEEEEcCCC
Q 024517           82 QILGNLDAFVHCYTY   96 (266)
Q Consensus        82 ~~~g~id~li~~ag~   96 (266)
                      .  +.+|+++.++|.
T Consensus       266 ~--~g~dvvid~~G~  278 (381)
T PLN02740        266 G--GGVDYSFECAGN  278 (381)
T ss_pred             C--CCCCEEEECCCC
Confidence            1  269999999875

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=94.70  E-value=0.54  Score=40.08  Aligned_cols=113  Identities=15%  Similarity=0.154  Sum_probs=69.6

Q ss_pred             EecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCC-CCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517           10 LTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKG-GQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus        10 ItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      |.|+ |.+|..+|..++.++.  +++++| +.+.++..+..++..... ..++.+.   ..+.             +.+.
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~---~~~~-------------~~~~   63 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR---SGDY-------------SDCK   63 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe---cCCH-------------HHHC
Confidence            3454 7899999999998875  699999 777777777766543211 1122221   1111             1224


Q ss_pred             CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           86 NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                      .-|++|..||.. . .+  .++..   ..+..    ..-+++.+.+.+.+..+.+.++++|.+..
T Consensus        64 daDivVitag~~-r-k~--g~~R~---dll~~----N~~i~~~~~~~i~~~~p~~~vivvsNP~d  117 (299)
T TIGR01771        64 DADLVVITAGAP-Q-KP--GETRL---ELVGR----NVRIMKSIVPEVVKSGFDGIFLVATNPVD  117 (299)
T ss_pred             CCCEEEECCCCC-C-CC--CCCHH---HHHHH----HHHHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            689999999872 2 22  23433   23333    44566666776666555788998887643

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=94.68  E-value=0.21  Score=42.30  Aligned_cols=29  Identities=28%  Similarity=0.453  Sum_probs=24.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-eEEEEe
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC-RLVLVG   36 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~-~v~~~~   36 (266)
                      +|+|.|++ |+|..+|+.|+..|. ++.++|
T Consensus         1 kVLIvGaG-GLGs~vA~~La~aGVg~ItlvD   30 (307)
T cd01486           1 KCLLLGAG-TLGCNVARNLLGWGVRHITFVD   30 (307)
T ss_pred             CEEEECCC-HHHHHHHHHHHHcCCCeEEEEC
Confidence            36777766 599999999999998 777776

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=94.67  E-value=0.26  Score=43.15  Aligned_cols=79  Identities=13%  Similarity=0.255  Sum_probs=49.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .+.++||.|+ +++|..+++.+...|+ +|+.++ +.++.+ ..+++      +...   ..|..+.++ ++.+.+.+..
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~-~~~~l------Ga~~---~i~~~~~~~-~~~~~v~~~~  253 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFE-LAKKF------GATD---CVNPKDHDK-PIQQVLVEMT  253 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHH-HHHHc------CCCE---EEcccccch-HHHHHHHHHh
Confidence            4789999975 8999999999999999 688887 444433 33332      2221   134333210 2333333332


Q ss_pred             HHhCCCCEEEEcCCC
Q 024517           82 QILGNLDAFVHCYTY   96 (266)
Q Consensus        82 ~~~g~id~li~~ag~   96 (266)
                      .  +.+|+++.+.|.
T Consensus       254 ~--~g~d~vid~~g~  266 (368)
T cd08300         254 D--GGVDYTFECIGN  266 (368)
T ss_pred             C--CCCcEEEECCCC
Confidence            2  469999999874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=94.66  E-value=0.21  Score=43.70  Aligned_cols=43  Identities=5%  Similarity=0.052  Sum_probs=32.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEK   47 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~   47 (266)
                      .++++||.|+ +++|..+++.....|++|++++ +.++..+..++
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~  226 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINR  226 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHh
Confidence            5789999765 8999999998888899988877 55544444333

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=94.65  E-value=0.53  Score=37.98  Aligned_cols=78  Identities=21%  Similarity=0.151  Sum_probs=52.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHh-----------cccCCCCCeEEEEEecCCCchH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMM-----------GSLKGGQPVEVVGLDMEEDREG   71 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~D~~~~~~~   71 (266)
                      .+.++|+.|.+.|   .=+..|+++|++|+.++ ++...+...++..           +.+. +.++.++.+|+.+.+  
T Consensus        34 ~~~rvLd~GCG~G---~da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~--  107 (213)
T TIGR03840        34 AGARVFVPLCGKS---LDLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYR-AGNIEIFCGDFFALT--  107 (213)
T ss_pred             CCCeEEEeCCCch---hHHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeee-cCceEEEEccCCCCC--
Confidence            5678999999886   45677889999999999 7766665433211           0011 357888999998866  


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEcCCC
Q 024517           72 AFDEAVDKACQILGNLDAFVHCYTY   96 (266)
Q Consensus        72 ~v~~~~~~~~~~~g~id~li~~ag~   96 (266)
                      .     .    ..+.+|.++..+..
T Consensus       108 ~-----~----~~~~fD~i~D~~~~  123 (213)
T TIGR03840       108 A-----A----DLGPVDAVYDRAAL  123 (213)
T ss_pred             c-----c----cCCCcCEEEechhh
Confidence            2     0    12467888887544

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=94.65  E-value=0.096  Score=44.65  Aligned_cols=37  Identities=16%  Similarity=0.301  Sum_probs=31.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccc
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERR   40 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~   40 (266)
                      .+.++||.|+++++|.++++.....|++++.+. +.++
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~  176 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAG  176 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHH
Confidence            478999999999999999999999999988876 4443

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=94.60  E-value=0.058  Score=41.28  Aligned_cols=37  Identities=27%  Similarity=0.342  Sum_probs=27.7

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-ccc
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NER   39 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~   39 (266)
                      .+.||+++|.|=+. +|+.+|+.|...|++|++++ ++.
T Consensus        20 ~l~Gk~vvV~GYG~-vG~g~A~~lr~~Ga~V~V~e~DPi   57 (162)
T PF00670_consen   20 MLAGKRVVVIGYGK-VGKGIARALRGLGARVTVTEIDPI   57 (162)
T ss_dssp             --TTSEEEEE--SH-HHHHHHHHHHHTT-EEEEE-SSHH
T ss_pred             eeCCCEEEEeCCCc-ccHHHHHHHhhCCCEEEEEECChH
Confidence            36899999998655 99999999999999999998 553

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=94.60  E-value=0.51  Score=40.85  Aligned_cols=36  Identities=14%  Similarity=0.241  Sum_probs=28.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCe-EEEEe-cccc
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCR-LVLVG-NERR   40 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~-v~~~~-~~~~   40 (266)
                      .+++++|+| .+++|..+++.+...|++ |+.++ +.++
T Consensus       160 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~  197 (347)
T PRK10309        160 EGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEK  197 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHH
Confidence            578999997 588999999988899997 56666 4443

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=94.58  E-value=0.077  Score=42.97  Aligned_cols=41  Identities=20%  Similarity=0.383  Sum_probs=33.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEK   47 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~   47 (266)
                      ++.|+||+|.+|.+++..|++.|++|++.+ ++++.++....
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            488999999999999999999999999888 55555554443

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=94.56  E-value=0.3  Score=42.96  Aligned_cols=92  Identities=10%  Similarity=0.027  Sum_probs=53.6

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecc-c-ccHH-HHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-R-RLSS-VAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~-~-~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      +++||++.|.|- |.||+.+++.|...|++|+..++. . .... ....+.+... ..++..+.+.++....-....+++
T Consensus       113 ~L~gktvGIIG~-G~IG~~vA~~l~a~G~~V~~~dp~~~~~~~~~~~~~L~ell~-~sDiI~lh~PLt~~g~~~T~~li~  190 (378)
T PRK15438        113 SLHDRTVGIVGV-GNVGRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELVQ-EADILTFHTPLFKDGPYKTLHLAD  190 (378)
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCcccccccccccCCHHHHHh-hCCEEEEeCCCCCCcccccccccC
Confidence            478999999998 569999999999999999998722 1 1100 0011111111 257777778887642001233443


Q ss_pred             H-HHHHhCCCCEEEEcCCC
Q 024517           79 K-ACQILGNLDAFVHCYTY   96 (266)
Q Consensus        79 ~-~~~~~g~id~li~~ag~   96 (266)
                      + ..+.+ +.+.++-|++.
T Consensus       191 ~~~l~~m-k~gailIN~aR  208 (378)
T PRK15438        191 EKLIRSL-KPGAILINACR  208 (378)
T ss_pred             HHHHhcC-CCCcEEEECCC
Confidence            2 22222 34555555554

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=94.52  E-value=0.31  Score=41.20  Aligned_cols=33  Identities=6%  Similarity=0.055  Sum_probs=30.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      ++.+++|.|+++++|.++++.....|++|+.+.
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~  174 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATT  174 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEe
Confidence            578999999999999999999999999988877

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=94.48  E-value=0.31  Score=42.54  Aligned_cols=38  Identities=18%  Similarity=0.201  Sum_probs=28.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSS   43 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~   43 (266)
                      +.+++|+|++. ||...+..+...|+ +|++++ ++++++-
T Consensus       169 ~~~V~V~GaGp-IGLla~~~a~~~Ga~~Viv~d~~~~Rl~~  208 (350)
T COG1063         169 GGTVVVVGAGP-IGLLAIALAKLLGASVVIVVDRSPERLEL  208 (350)
T ss_pred             CCEEEEECCCH-HHHHHHHHHHHcCCceEEEeCCCHHHHHH
Confidence            44899998877 99999888888898 566667 5555443

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=94.39  E-value=0.27  Score=35.84  Aligned_cols=90  Identities=16%  Similarity=0.250  Sum_probs=58.2

Q ss_pred             chHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC--CCCEEEEc
Q 024517           16 EISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG--NLDAFVHC   93 (266)
Q Consensus        16 giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g--~id~li~~   93 (266)
                      |||...++.+...|++|+++++.+...+..+++      |  + -...|-++.+      ..+++.+..+  ++|++|.|
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~------G--a-~~~~~~~~~~------~~~~i~~~~~~~~~d~vid~   65 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKEL------G--A-DHVIDYSDDD------FVEQIRELTGGRGVDVVIDC   65 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT------T--E-SEEEETTTSS------HHHHHHHHTTTSSEEEEEES
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhh------c--c-cccccccccc------cccccccccccccceEEEEe
Confidence            589999999999999999999444334444443      1  2 2225666654      4444544444  59999999


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           94 YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        94 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                      +|..                          ...+..+..+++   +|+++.++...
T Consensus        66 ~g~~--------------------------~~~~~~~~~l~~---~G~~v~vg~~~   92 (130)
T PF00107_consen   66 VGSG--------------------------DTLQEAIKLLRP---GGRIVVVGVYG   92 (130)
T ss_dssp             SSSH--------------------------HHHHHHHHHEEE---EEEEEEESSTS
T ss_pred             cCcH--------------------------HHHHHHHHHhcc---CCEEEEEEccC
Confidence            9841                          123344455554   68999998865

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=94.39  E-value=0.32  Score=41.61  Aligned_cols=34  Identities=15%  Similarity=0.206  Sum_probs=30.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      ++.+++|.|+++.+|.++++.....|++|+.+.+
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~  172 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCS  172 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeC
Confidence            5778999999999999999988888999888773

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	266
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		7e-14
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		6e-13
2xox_A	288	Crystal Structure Of Pteridine Reductase (Ptr1) Fro		2e-12
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		6e-12
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-12
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		7e-12
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		7e-12
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		1e-11
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		1e-11
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		2e-11
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		2e-11
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		2e-11
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		2e-11
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		2e-11
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		2e-11
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		2e-11
1w0c_A	307	Inhibition Of Leishmania Major Pteridine Reductase		2e-11
2qhx_A	328	Structure Of Pteridine Reductase From Leishmania Ma		2e-11
1e7w_A	291	One Active Site, Two Modes Of Reduction Correlate T		2e-11
1e92_A	288	Pteridine Reductase 1 From Leishmania Major Complex		2e-11
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-11
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		4e-11
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		4e-11
1mxf_A	276	Crystal Structure Of Inhibitor Complex Of Putative		7e-11
1mxh_A	276	Crystal Structure Of Substrate Complex Of Putative		7e-11
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-10
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		3e-10
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		3e-10
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		3e-10
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		5e-10
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		5e-10
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		5e-10
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		9e-10
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		1e-09
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		1e-09
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		2e-09
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		2e-09
3ojf_A	257	Crystal Structure Of The Bacillus Cereus Enoyl-Acyl		2e-09
2qio_A	256	X-Ray Structure Of Enoyl-Acyl Carrier Protein Reduc		2e-09
3oif_A	266	Crystal Structure Of Enoyl-Acp Reductases I (Fabi)		2e-09
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		3e-09
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		3e-09
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		4e-09
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		4e-09
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		4e-09
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		4e-09
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-09
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		6e-09
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		6e-09
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		1e-08
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		1e-08
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		1e-08
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		2e-08
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		3e-08
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		4e-08
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		4e-08
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		6e-08
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		7e-08
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		8e-08
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		1e-07
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		1e-07
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		1e-07
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		2e-07
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		2e-07
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		2e-07
4fs3_A	256	Crystal Structure Of Staphylococcus Aureus Enoyl-Ac		2e-07
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		2e-07
4ali_A	282	Crystal Structure Of S. Aureus Fabi In Complex With		3e-07
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		4e-07
3gnt_A	256	Crystal Structure Of The Staphylococcus Aureus Enoy		4e-07
4all_A	277	Crystal Structure Of S. Aureus Fabi In Complex With		4e-07
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		4e-07
3gns_A	260	Crystal Structure Of The Staphylococcus Aureus Enoy		4e-07
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		5e-07
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		5e-07
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		6e-07
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		7e-07
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		7e-07
2o2s_A	315	The Structure Of T. Gondii Enoyl Acyl Carrier Prote		8e-07
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		8e-07
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		9e-07
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		3e-06
4eit_A	276	Crystal Structure Of An Enoyl-(Acyl Carrier Protein		3e-06
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		3e-06
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		3e-06
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		3e-06
2o50_A	315	The Crystal Structure Of Toxoplasma Gondii Enoyl Ac		4e-06
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		4e-06
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		5e-06
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		5e-06
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-06
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		5e-06
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		7e-06
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		7e-06
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		7e-06
1ulu_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		7e-06
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		8e-06
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		8e-06
2p91_A	285	Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R		9e-06
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		9e-06
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		9e-06
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		1e-05
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-05
2yw9_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		1e-05
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		2e-05
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		2e-05
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-05
3grk_A	293	Crystal Structure Of Short Chain Dehydrogenase Redu		2e-05
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		2e-05
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		2e-05
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		2e-05
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		3e-05
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		3e-05
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		3e-05
3k2e_A	296	Crystal Structure Of Enoyl-(Acyl-Carrier-Protein) R		3e-05
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		3e-05
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		4e-05
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		4e-05
4ixt_A	254	Structure Of A 37-fold Mutant Of Halohydrin Dehalog		5e-05
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		5e-05
1pwx_A	254	Crystal Structure Of The Haloalcohol Dehalogenase H		7e-05
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		7e-05
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		8e-05
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		9e-05
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		9e-05
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		9e-05
2jjy_A	268	Crystal Structure Of Francisella Tularensis Enoyl R		1e-04
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		1e-04
3nrc_A	280	Crystal Stucture Of The Francisella Tularensis Enoy		1e-04
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		1e-04
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		1e-04
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		1e-04
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-04
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		2e-04
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		3e-04
2ptg_A	319	Crystal Structure Of Eimeria Tenella Enoyl Reductas		3e-04
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		5e-04
2aqi_A	269	Crystal Structure Of Isoniazid-Resistant I47t Enoyl		5e-04
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		6e-04
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		7e-04

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 81/148 (54%), Gaps = 13/148 (8%)
Query: 118 NFVAPWFLLKAVGRRMKESKA-----GGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQL 172
           N +AP+FL+KA  +R+ +++A       SIV +   + ++  L            ++  L
Sbjct: 148 NAIAPYFLIKAFAQRVADTRAEQRGTSYSIVNMVDAMTSQPLL--GYTMYTMAKEALEGL 205
Query: 173 VRTAAMEIGKHKIRVNGIARGLH-LQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAS 231
            R+AA+E+   +IRVNG++ GL  L D+ P +V ++      R   PL++      +++ 
Sbjct: 206 TRSAALELASLQIRVNGVSPGLSVLPDDMPFSVQED-----YRRKVPLYQRNSSAEEVSD 260
Query: 232 TVIYLISDGSRYMTGTTIYVDGAQSITR 259
            VI+L S  ++Y+TGT I VDG  S+TR
Sbjct: 261 VVIFLCSPKAKYITGTCIKVDGGYSLTR 288

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 109/260 (41%), Gaps = 22/260 (8%)
Query: 8   VLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEE 67
           VL+T  G  + +  A  LA  G +L LV  +     +       L+     EV+    + 
Sbjct: 16  VLITGGGSGLGRATAVRLAAEGAKLSLV--DVSSEGLEASKAAVLETAPDAEVLTTVADV 73
Query: 68  DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLK 127
             E   +  V    +  G +D F +    EGK          EF K+V IN    +  L+
Sbjct: 74  SDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLE 133
Query: 128 AVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKIRV 187
            V + M+E  +G  +V  T+ +G  RG+             +  L R +A+E G++ IR+
Sbjct: 134 KVLKIMREQGSG--MVVNTASVGGIRGI-GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRI 190
Query: 188 NGIARGL-----------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL 236
           N IA G             L  E P      +A +   +  P  R+ +   ++A+ V +L
Sbjct: 191 NAIAPGAIWTPMVENSMKQLDPENP-----RKAAEEFIQVNPSKRYGEAP-EIAAVVAFL 244
Query: 237 ISDGSRYMTGTTIYVDGAQS 256
           +SD + Y+  T + +DG QS
Sbjct: 245 LSDDASYVNATVVPIDGGQS 264

>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 80/158 (50%), Gaps = 13/158 (8%)
Query: 108 EDEFKKLVKINFVAPWFLLKAVGRRMKESKA-----GGSIVFLTSIIGAERGLYPXXXXX 162
           E     L   N +AP+FL+KA   R+ ++ A       SIV +   + ++  L       
Sbjct: 137 EAAAADLFGSNAMAPYFLIKAFAHRVADTPAEQRGTNYSIVNMVDAMTSQPLL--GYTIY 194
Query: 163 XXXXXSIHQLVRTAAMEIGKHKIRVNGIARGLH-LQDEYPIAVGQERAVKLVREAAPLHR 221
                ++  L R+AA+E+   +IRVNG+  GL  L D+ P AV ++      R   PL++
Sbjct: 195 TMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLADDMPPAVRED-----YRSKVPLYQ 249
Query: 222 WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 259
                 +++  VI+L S  ++Y+TGT + VDG  S+TR
Sbjct: 250 RDSSAAEVSDVVIFLCSSKAKYVTGTCVKVDGGYSLTR 287

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 26/258 (10%)
Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVL--VGNERRLSSVAEKMMGSLKGGQPVEVV 61
           + K  L+T     I + IA  LAK+G  +V+   GNE++ + V +++    K G     V
Sbjct: 3   KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIK---KLGSDAIAV 59
Query: 62  GLDME--EDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKI 117
             D+   ED      + VD    + G +D  V+     G  +D L  ++ E+E+  ++  
Sbjct: 60  RADVANAEDVTNMVKQTVD----VFGQVDILVN---NAGVTKDNLLMRMKEEEWDTVINT 112
Query: 118 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAA 177
           N    +   KAV R M   + G  IV + S++G      P           +  L +T+A
Sbjct: 113 NLKGVFLCTKAVSRFMMRQRHG-RIVNIASVVGVTGN--PGQANYVAAKAGVIGLTKTSA 169
Query: 178 MEIGKHKIRVNGIARGLHLQDEYPIAVGQERA--VKLVREAAPLHRWLDVKNDLASTVIY 235
            E+    I VN IA G    D   +     +A  +KL+    P  ++ + + D+A+ V +
Sbjct: 170 KELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLI----PAAQFGEAQ-DIANAVTF 224
Query: 236 LISDGSRYMTGTTIYVDG 253
             SD S+Y+TG T+ VDG
Sbjct: 225 FASDQSKYITGQTLNVDG 242

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 115/247 (46%), Gaps = 15/247 (6%)
Query: 9   LLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEED 68
           ++T     I + IA  LA+RG  ++         + AE +  + K    +E  G  +  +
Sbjct: 32  IVTGASRGIGRAIALELARRGAMVI---GTATTEAGAEGIGAAFKQAG-LEGRGAVLNVN 87
Query: 69  REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLL 126
              A D  V+   +  G L+  V+     G  QD L  ++ +DE+  ++  N  A + L 
Sbjct: 88  DATAVDALVESTLKEFGALNVLVN---NAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLS 144
Query: 127 KAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKIR 186
           +AV R M +++ GG IV +TS++G+     P           +  + R  A EIG   I 
Sbjct: 145 RAVLRPMMKAR-GGRIVNITSVVGSAG--NPGQVNYAAAKAGVAGMTRALAREIGSRGIT 201
Query: 187 VNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
           VN +A G  +  +    + QE+   L +   PL R L    D+A  V +L S  + Y+TG
Sbjct: 202 VNCVAPGF-IDTDMTKGLPQEQQTAL-KTQIPLGR-LGSPEDIAHAVAFLASPQAGYITG 258
Query: 247 TTIYVDG 253
           TT++V+G
Sbjct: 259 TTLHVNG 265

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 120/249 (48%), Gaps = 20/249 (8%)
Query: 7   RVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           R L+T  G  I ++    L   G ++V V      L S+A++  G       +E V +D+
Sbjct: 9   RALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG-------IEPVCVDL 61
Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 125
                G +D A +KA   +G +D  V+       MQ  L+V ++ F +   +N  + + +
Sbjct: 62  -----GDWD-ATEKALGGIGPVDLLVNNAALV-IMQPFLEVTKEAFDRSFSVNLRSVFQV 114
Query: 126 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKI 185
            + V R M      GSIV ++S++      +P          ++  L +  AME+G HKI
Sbjct: 115 SQMVARDMINRGVPGSIVNVSSMVA--HVTFPNLITYSSTKGAMTMLTKAMAMELGPHKI 172
Query: 186 RVNGIARGLHLQDE-YPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
           RVN +   + L D    ++   E A KL +E  PL ++ +V+ D+ +++++L+SD S   
Sbjct: 173 RVNSVNPTVVLTDMGKKVSADPEFARKL-KERHPLRKFAEVE-DVVNSILFLLSDRSAST 230
Query: 245 TGTTIYVDG 253
           +G  I VD 
Sbjct: 231 SGGGILVDA 239

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 112/264 (42%), Gaps = 22/264 (8%)
Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
             K  L+T  G  I    A  LA+ G  + L+   R      EK   S++  + VE    
Sbjct: 6   NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNRE---ALEKAEASVRE-KGVEARSY 61
Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
             +   E A    VD   +  G +D   +   Y+G          D+F +++ IN    +
Sbjct: 62  VCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAF 121
Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKH 183
            +LKAV R+M  ++  G IV   S+ G +    P          +I  L  TAA+++  +
Sbjct: 122 HVLKAVSRQMI-TQNYGRIVNTASMAGVKGP--PNMAAYGTSKGAIIALTETAALDLAPY 178
Query: 184 KIRVNGIARGL-------HLQDEYPIAVGQE---RAVKLVRE----AAPLHRWLDVKNDL 229
            IRVN I+ G          Q E    VG +      K+V +    + P+ R+ D+ N++
Sbjct: 179 NIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDI-NEI 237
Query: 230 ASTVIYLISDGSRYMTGTTIYVDG 253
              V +L+ D S +MTG  + + G
Sbjct: 238 PGVVAFLLGDDSSFMTGVNLPIAG 261

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 117/270 (43%), Gaps = 24/270 (8%)
Query: 3   NQAKRV-LLTSDGDEISKNIAFHLAKRGCRLVLVGNER-RLSSVAEKMMGSLKGGQPVEV 60
           NQ   V L+T  G  I +  A  LA  G  +  +G  R  +  VA++++G+  GGQ    
Sbjct: 25  NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQ---A 79
Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFV 120
           + L+ +   E     AV       G+LD  V      G       +   E+ + + +N  
Sbjct: 80  IALEADVSDELQXRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLR 139
Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEI 180
             +  L      +K+ + GG+IV ++SI G      P          +   +V+  A+E+
Sbjct: 140 GTFLTLHLTVPYLKQ-RGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALEL 198
Query: 181 GKHKIRVNGIARG-----------LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDL 229
           GKH IRVN +  G           L  ++E  I V   +    + +  P         D+
Sbjct: 199 GKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGR-----SEDV 253
Query: 230 ASTVIYLISDGSRYMTGTTIYVDGAQSITR 259
           A  + +L+S+ +R++TG+ +++DG Q + R
Sbjct: 254 AELIRFLVSERARHVTGSPVWIDGGQGLLR 283

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 10/183 (5%)
Query: 81  CQIL-GNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 137
           C +L  N  AF      +G  +D    +  E +  +L+  N +AP+ L  +  +R K + 
Sbjct: 87  CDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTN 146
Query: 138 AGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLV---RTAAMEIGKHKIRVNGIARGL 194
              +   L+ +   +  +              H LV   ++AA+E+  + IRVNG+A G+
Sbjct: 147 PNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGV 206
Query: 195 HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 254
            L    P+A+G+E   K  R   PL R       +A  VI+L+S  ++Y+TG+ I VDG 
Sbjct: 207 SL---LPVAMGEEEKDKW-RRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGG 262
Query: 255 QSI 257
            S+
Sbjct: 263 LSL 265

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 79/183 (43%), Gaps = 10/183 (5%)
Query: 77  VDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 136
           VD     LG LD  V         Q    +  ++F+ ++ IN    W  + A   R+ E 
Sbjct: 92  VDDGVAALGRLDIIVANAGVAAP-QAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEG 150
Query: 137 KAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKIRVNGIARG--- 193
             GGSI+ ++S  G +  + P          ++  L R  A E+GKH IRVN +  G   
Sbjct: 151 GRGGSIILISSAAGMK--MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVN 208
Query: 194 -LHLQDEYPIAVGQ--ERAVKLVREAAP-LHRWLDVKNDLASTVIYLISDGSRYMTGTTI 249
                 +   AVGQ  E   +L     P L  W+    D+A TV +L SD SR +T   I
Sbjct: 209 TPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQI 268
Query: 250 YVD 252
            VD
Sbjct: 269 PVD 271

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 10/183 (5%)
Query: 81  CQIL-GNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 137
           C +L  N  AF      +G  +D    +  E +  +L+  N +AP+ L  +  +R K + 
Sbjct: 87  CDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTN 146
Query: 138 AGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLV---RTAAMEIGKHKIRVNGIARGL 194
              +   L+ +   +  +              H LV   ++AA+E+  + IRVNG+A G+
Sbjct: 147 PNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGV 206
Query: 195 HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 254
            L    P+A+G+E   K  R   PL R       +A  VI+L+S  ++Y+TG+ I VDG 
Sbjct: 207 SL---LPVAMGEEEKDKW-RRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGG 262
Query: 255 QSI 257
            S+
Sbjct: 263 LSL 265

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 10/183 (5%)
Query: 81  CQIL-GNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 137
           C +L  N  AF      +G  +D    +  E +  +L+  N +AP+ L  +  +R K + 
Sbjct: 107 CDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTN 166
Query: 138 AGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLV---RTAAMEIGKHKIRVNGIARGL 194
              +   L+ +   +  +              H LV   ++AA+E+  + IRVNG+A G+
Sbjct: 167 PNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGV 226
Query: 195 HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 254
            L    P+A+G+E   K  R   PL R       +A  VI+L+S  ++Y+TG+ I VDG 
Sbjct: 227 SL---LPVAMGEEEKDKW-RRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGG 282
Query: 255 QSI 257
            S+
Sbjct: 283 LSL 285

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 10/183 (5%)
Query: 81  CQIL-GNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 137
           C +L  N  AF      +G  +D    +  E +  +L+  N +AP+ L  +  +R K + 
Sbjct: 87  CDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTN 146
Query: 138 AGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLV---RTAAMEIGKHKIRVNGIARGL 194
              +   L+ +   +  +              H LV   ++AA+E+  + IRVNG+A G+
Sbjct: 147 PNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGV 206
Query: 195 HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 254
            L    P+A+G+E   K  R   PL R       +A  VI+L+S  ++Y+TG+ I VDG 
Sbjct: 207 SL---LPVAMGEEEKDKW-RRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGG 262
Query: 255 QSI 257
            S+
Sbjct: 263 LSL 265

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 10/183 (5%)
Query: 81  CQIL-GNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 137
           C +L  N  AF      +G  +D    +  E +  +L+  N +AP+ L  +  +R K + 
Sbjct: 107 CDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTN 166
Query: 138 AGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLV---RTAAMEIGKHKIRVNGIARGL 194
              +   L+ +   +  +              H LV   ++AA+E+  + IRVNG+A G+
Sbjct: 167 PNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGV 226
Query: 195 HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 254
            L    P+A+G+E   K  R   PL R       +A  VI+L+S  ++Y+TG+ I VDG 
Sbjct: 227 SL---LPVAMGEEEKDKW-RRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGG 282
Query: 255 QSI 257
            S+
Sbjct: 283 LSL 285

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 10/183 (5%)
Query: 81  CQIL-GNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 137
           C +L  N  AF      +G  +D    +  E +  +L+  N +AP+ L  +  +R K + 
Sbjct: 107 CDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTN 166
Query: 138 AGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLV---RTAAMEIGKHKIRVNGIARGL 194
              +   L+ +   +  +              H LV   ++AA+E+  + IRVNG+A G+
Sbjct: 167 PNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGV 226
Query: 195 HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 254
            L    P+A+G+E   K  R   PL R       +A  VI+L+S  ++Y+TG+ I VDG 
Sbjct: 227 SL---LPVAMGEEEKDKW-RRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGG 282
Query: 255 QSI 257
            S+
Sbjct: 283 LSL 285

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 10/183 (5%)
Query: 81  CQIL-GNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 137
           C +L  N  AF      +G  +D    +  E +  +L+  N +AP+ L  +  +R K + 
Sbjct: 107 CDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTN 166
Query: 138 AGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLV---RTAAMEIGKHKIRVNGIARGL 194
              +   L+ +   +  +              H LV   ++AA+E+  + IRVNG+A G+
Sbjct: 167 PNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGV 226
Query: 195 HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 254
            L    P+A+G+E   K  R   PL R       +A  VI+L+S  ++Y+TG+ I VDG 
Sbjct: 227 SL---LPVAMGEEEKDKW-RRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGG 282
Query: 255 QSI 257
            S+
Sbjct: 283 LSL 285

>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 108 EDEFKKLVKINFVAPWFLLKAVGRRMKESKA---GGSIVFLTSIIGAERGLYPXXXXXXX 164
           E     L   N +AP+FL+KA   R+  + A   G +   +  +                
Sbjct: 156 ETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTM 215
Query: 165 XXXSIHQLVRTAAMEIGKHKIRVNGIARGLH-LQDEYPIAVGQERAVKLVREAAPLHRWL 223
              ++  L R+AA+E+   +IRVNG+  GL  L D+ P AV +       R   PL++  
Sbjct: 216 AKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGH-----RSKVPLYQRD 270
Query: 224 DVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 259
               +++  VI+L S  ++Y+TGT + VDG  S+TR
Sbjct: 271 SSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 306

>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 108 EDEFKKLVKINFVAPWFLLKAVGRRMKESKA---GGSIVFLTSIIGAERGLYPXXXXXXX 164
           E     L   N +AP+FL+KA   R+  + A   G +   +  +                
Sbjct: 177 ETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTM 236
Query: 165 XXXSIHQLVRTAAMEIGKHKIRVNGIARGLH-LQDEYPIAVGQERAVKLVREAAPLHRWL 223
              ++  L R+AA+E+   +IRVNG+  GL  L D+ P AV +       R   PL++  
Sbjct: 237 AKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGH-----RSKVPLYQRD 291
Query: 224 DVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 259
               +++  VI+L S  ++Y+TGT + VDG  S+TR
Sbjct: 292 SSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 327

>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 108 EDEFKKLVKINFVAPWFLLKAVGRRMKESKA---GGSIVFLTSIIGAERGLYPXXXXXXX 164
           E     L   N +AP+FL+KA   R+  + A   G +   +  +                
Sbjct: 140 ETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTM 199
Query: 165 XXXSIHQLVRTAAMEIGKHKIRVNGIARGLH-LQDEYPIAVGQERAVKLVREAAPLHRWL 223
              ++  L R+AA+E+   +IRVNG+  GL  L D+ P AV +       R   PL++  
Sbjct: 200 AKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGH-----RSKVPLYQRD 254
Query: 224 DVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 259
               +++  VI+L S  ++Y+TGT + VDG  S+TR
Sbjct: 255 SSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 290

>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 108 EDEFKKLVKINFVAPWFLLKAVGRRMKESKA---GGSIVFLTSIIGAERGLYPXXXXXXX 164
           E     L   N +AP+FL+KA   R+  + A   G +   +  +                
Sbjct: 137 ETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTM 196
Query: 165 XXXSIHQLVRTAAMEIGKHKIRVNGIARGLH-LQDEYPIAVGQERAVKLVREAAPLHRWL 223
              ++  L R+AA+E+   +IRVNG+  GL  L D+ P AV +       R   PL++  
Sbjct: 197 AKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGH-----RSKVPLYQRD 251
Query: 224 DVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 259
               +++  VI+L S  ++Y+TGT + VDG  S+TR
Sbjct: 252 SSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 287

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 24/198 (12%)
Query: 72  AFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 131
           A   AVD   + LG LD  V         +   ++ ++ ++ ++ IN    W  +KA   
Sbjct: 90  ALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNVWQDMIDINLTGVWHTVKAGVP 149
Query: 132 RMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKIRVNGIA 191
            +     GGSIV  +S+ G  R  YP           +  L+R  A+E+G H IRVN + 
Sbjct: 150 HVLSGGRGGSIVLTSSVGG--RKAYPNTGHYIAAKHGVIGLMRAFAVELGPHMIRVNAV- 206
Query: 192 RGLHLQDEYPIAVGQERAVKLVR---------EAAPLHR--------WLDVKNDLASTVI 234
             L  Q    + V  ++  +L R         + AP+ +        W+D  +D+++ V+
Sbjct: 207 --LPTQVSTTM-VMNDQTFRLFRPDLENPGPDDFAPISQMMHTLPVPWVD-ASDISNAVL 262
Query: 235 YLISDGSRYMTGTTIYVD 252
           +L SD SRY+TG ++ VD
Sbjct: 263 FLASDESRYVTGVSLPVD 280

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 13/232 (5%)
Query: 32  LVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAF 90
           +++VG N  +L+   +++      G  +     D+  + E A   AVD      G L   
Sbjct: 38  VMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETA--RAVDAVTAWHGRLHGV 95
Query: 91  VHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG 150
           VHC      +    QV  + +++ V +N     ++LK   R M     GGS V ++SI  
Sbjct: 96  VHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRG-GGGSFVGISSI-- 152
Query: 151 AERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV 210
           A    +           ++  L++ AA E+G   +RVN I  GL   D   +      + 
Sbjct: 153 AASNTHRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTD---LVAAITESA 209
Query: 211 KLVREAA---PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 259
           +L  + A   PL R  +V+ D+A+  ++L+SD + ++TG  I VDG Q + R
Sbjct: 210 ELSSDYAMCTPLPRQGEVE-DVANMAMFLLSDAASFVTGQVINVDGGQMLRR 260

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 72  AFDEAVDKACQILGNLDAFVHCY--TYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAV 129
           +    VD+A    G++D  V     + +G++   + + + ++  +++ N +  W   +AV
Sbjct: 121 SLQAVVDEALAEFGHIDILVSNVGISNQGEV---VSLTDQQWSDILQTNLIGAWHACRAV 177
Query: 130 GRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKIRVNG 189
              M E   GGS++F++S +G  RG  P           +  L+ + A E+G+H IRVN 
Sbjct: 178 LPSMIERGQGGSVIFVSSTVGL-RG-APGQSHYAASKHGVQGLMLSLANEVGRHNIRVNS 235
Query: 190 IARGL-----------------HLQDEYPIAVGQERAVKLVREAAPLH-RWLDVKNDLAS 231
           +  G                  HL++       +E A +L  +   L   W++   D+++
Sbjct: 236 VNPGAVNTEMALNEKLLKMFLPHLENPT-----REDAAELFSQLTLLPIPWVE-PEDVSN 289
Query: 232 TVIYLISDGSRYMTGTTIYVDGAQ 255
            V +L SD +RY+ G  I VDG Q
Sbjct: 290 AVAWLASDEARYIHGAAIPVDGGQ 313

>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 119/275 (43%), Gaps = 26/275 (9%)
Query: 3   NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSL---KGGQPVE 59
           ++    ++T     I  +IA  L ++G R+V+  + R     A++++  L   + G  V 
Sbjct: 9   SECPAAVITGGARRIGHSIAVRLHQQGFRVVV--HYRHSEGAAQRLVAELNAARAGSAVL 66
Query: 60  VVG-LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGED--------- 109
             G L +        ++ +D + +  G  D  V+          PL  G+D         
Sbjct: 67  CKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVN--NASAYYPTPLLPGDDTNGAADAKP 124
Query: 110 ---EFKKLVKINFVAPWFLLKAVGRRMKESKAGGS-IVFLTSIIGAERGL-YPXXXXXXX 164
              +  +L   N VAP FL++A  RR  E  A  S  + + ++  A   L  P       
Sbjct: 125 IDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAXTDLPLPGFCVYTX 184
Query: 165 XXXSIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLD 224
              ++  L R AA+E+    IRVN +A GL L    P A  QE   +  R+  PL +   
Sbjct: 185 AKHALGGLTRAAALELAPRHIRVNAVAPGLSL---LPPAXPQETQEEYRRKV-PLGQSEA 240
Query: 225 VKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 259
               +A  + +L+S  + Y+TGTT+ VDG   + R
Sbjct: 241 SAAQIADAIAFLVSKDAGYITGTTLKVDGGLILAR 275

>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 118/275 (42%), Gaps = 26/275 (9%)
Query: 3   NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSL---KGGQPVE 59
           ++    ++T     I  +IA  L ++G R+V+  + R     A++++  L   + G  V 
Sbjct: 9   SECPAAVITGGARRIGHSIAVRLHQQGFRVVV--HYRHSEGAAQRLVAELNAARAGSAVL 66
Query: 60  VVG-LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGED--------- 109
             G L +        ++ +D + +  G  D  V+          PL  G+D         
Sbjct: 67  CKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVN--NASAYYPTPLLPGDDTNGAADAKP 124
Query: 110 ---EFKKLVKINFVAPWFLLKAVGRRMKESKAGGS-IVFLTSIIGAERGL-YPXXXXXXX 164
              +  +L   N VAP FL++A  RR  E  A  S  + + ++  A   L  P       
Sbjct: 125 IDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTM 184
Query: 165 XXXSIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLD 224
              ++  L R AA+E+    IRVN +A GL L    P A+ QE   +  R   PL +   
Sbjct: 185 AKHALGGLTRAAALELAPRHIRVNAVAPGLSL---LPPAMPQETQEEY-RRKVPLGQSEA 240
Query: 225 VKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 259
               +A  + +L+S  + Y+TGTT+ VDG   + R
Sbjct: 241 SAAQIADAIAFLVSKDAGYITGTTLKVDGGLILAR 275

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 13/250 (5%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEV-VGL 63
           KR L+T     I K +A   A+ G ++ +   +   L  VA+++ G   GG+ + +   +
Sbjct: 33  KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAG--VGGKALPIRCDV 90
Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
              +   G  D+   +    LG +D  V C      +Q  L +  +EF+++   N    +
Sbjct: 91  TQPDQVRGMLDQMTGE----LGGIDIAV-CNAGIVSVQAMLDMPLEEFQRIQDTNVTGVF 145
Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKH 183
              +A  R M +   GG+I+   S+ G    +            ++  L +  A+E+  H
Sbjct: 146 LTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPH 205
Query: 184 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
           +IRVN ++ G +++ E    +    A  L     PL R +    +L    +YL S  S Y
Sbjct: 206 QIRVNSVSPG-YIRTELVEPLADYHA--LWEPKIPLGR-MGRPEELTGLYLYLASAASSY 261
Query: 244 MTGTTIYVDG 253
           MTG+ I +DG
Sbjct: 262 MTGSDIVIDG 271

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 114/270 (42%), Gaps = 34/270 (12%)
Query: 1   MENQAKRVL--LTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGS--LKGGQ 56
           M+N+ +  L  +T  G  I + ++  LA  G  +     +R  +    +++G    K G 
Sbjct: 1   MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGP 60
Query: 57  PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYT--------YEGKMQDP--LQV 106
           P              AF   V +A      L+    C++          G  QD   L +
Sbjct: 61  P---------RGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHM 111
Query: 107 GEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXX 166
            ED++ K++ +N    + + +A  + +  +   GSI+ ++SI+G    +           
Sbjct: 112 SEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNV--GQTNYAASK 169
Query: 167 XSIHQLVRTAAMEIGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWL 223
             +  L +TAA E+G+H IR N +  G     +  + P     ++ V  + E  P+    
Sbjct: 170 AGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVP-----QKVVDKITEMIPMGHLG 224
Query: 224 DVKNDLASTVIYLISDGSRYMTGTTIYVDG 253
           D   D+A  V +L S+ S Y+TGT++ V G
Sbjct: 225 D-PEDVADVVAFLASEDSGYITGTSVEVTG 253

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 34/272 (12%)
Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSL-KGGQPVEVV- 61
           + K  L+T  G  I + +A  L +RGC++++  N    +  AE+++ ++ K G     V 
Sbjct: 28  EGKVALVTGAGRGIGREMAMELGRRGCKVIV--NYANSTESAEEVVAAIKKNGSDAACVK 85
Query: 62  -GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYE----GKMQDPLQVGEDEFKKLVK 116
             + + ED    F+EAV    +I G LD  + C        G ++D   V  +EF ++  
Sbjct: 86  ANVGVVEDIVRMFEEAV----KIFGKLD--IVCSNSGVVSFGHVKD---VTPEEFDRVFT 136
Query: 117 INFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTA 176
           IN    +F+ +      K  + GG ++ + SI G  + + P          +I    R  
Sbjct: 137 INTRGQFFVAR---EAYKHLEIGGRLILMGSITGQAKAV-PKHAVYSGSKGAIETFARCM 192
Query: 177 AMEIGKHKIRVNGIARGLHLQDEYP------IAVGQERAVKLVREAA-----PLHRWLDV 225
           A+++   KI VN +A G    D Y       I  G+  + + V E A     PL R + +
Sbjct: 193 AIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRR-VGL 251
Query: 226 KNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 257
             D+A  V +L S+   ++TG  I +DG   +
Sbjct: 252 PIDIARVVCFLASNDGGWVTGKVIGIDGGACM 283

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 34/272 (12%)
Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSL-KGGQPVEVV- 61
           + K  L+T  G  I + +A  L +RGC++++  N    +  AE+++ ++ K G     V 
Sbjct: 28  EGKVALVTGAGRGIGREMAMELGRRGCKVIV--NYANSTESAEEVVAAIKKNGSDAACVK 85
Query: 62  -GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYE----GKMQDPLQVGEDEFKKLVK 116
             + + ED    F+EAV    +I G LD  + C        G ++D   V  +EF ++  
Sbjct: 86  ANVGVVEDIVRMFEEAV----KIFGKLD--IVCSNSGVVSFGHVKD---VTPEEFDRVFT 136
Query: 117 INFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTA 176
           IN    +F+ +      K  + GG ++ + SI G  + + P          +I    R  
Sbjct: 137 INTRGQFFVAR---EAYKHLEIGGRLILMGSITGQAKAV-PKHAVYSGSKGAIETFARCM 192
Query: 177 AMEIGKHKIRVNGIARGLHLQDEYP------IAVGQERAVKLVREAA-----PLHRWLDV 225
           A+++   KI VN +A G    D Y       I  G+  + + V E A     PL R + +
Sbjct: 193 AIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRR-VGL 251
Query: 226 KNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 257
             D+A  V +L S+   ++TG  I +DG   +
Sbjct: 252 PIDIARVVCFLASNDGGWVTGKVIGIDGGACM 283

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 29/263 (11%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKG-GQPVEVVGLD 64
           K  L+T  G  I   +A HL + G ++V+  N    +  AEK++  +K  G     +  D
Sbjct: 19  KVALVTGSGRGIGAAVAVHLGRLGAKVVV--NYANSTKDAEKVVSEIKALGSDAIAIKAD 76
Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
           + +  E    +  D+A    G+LD  V        G ++D   V E+EF ++  +N    
Sbjct: 77  IRQVPE--IVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKD---VTEEEFDRVFSLNTRGQ 131
Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGK 182
           +F+ +   R + E   GG IV LTS   ++    P          ++   VR  + + G 
Sbjct: 132 FFVAREAYRHLTE---GGRIV-LTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIFSKDCGD 187
Query: 183 HKIRVNGIARG------LHLQDEYPIAVGQ----ERAVKLVREAAPLHR--WLDVKNDLA 230
            KI VN +A G       H    + I  G     E+  ++   A+PLHR  W     D+A
Sbjct: 188 KKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGW---PQDVA 244
Query: 231 STVIYLISDGSRYMTGTTIYVDG 253
           + V +L+S    ++ G  + +DG
Sbjct: 245 NVVGFLVSKEGEWVNGKVLTLDG 267

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 26/204 (12%)
Query: 72  AFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL-QVGEDEFKKLVKINFVAPWFLLKAVG 130
           A   AVD   + LG LD  V      G   D L +  E+++ +++ IN    W  +KA  
Sbjct: 90  ALKAAVDSGVEQLGRLDIIV-ANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGV 148
Query: 131 RRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKIRVNGI 190
             M     GGSI+  +S+ G +   YP           +  L+R   +E+G+H IRVN +
Sbjct: 149 PHMIAGGRGGSIILTSSVGGLKA--YPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSV 206
Query: 191 ARGLHLQDEYPIAVGQERAVKLVR---------EAAPLHR--------WLDVKNDLASTV 233
               H++      +  E   K+ R         + AP+ +        W++   D+++ V
Sbjct: 207 -HPTHVKTPM---LHNEGTFKMFRPDLENPGPDDMAPICQMFHTLPIPWVE-PIDISNAV 261
Query: 234 IYLISDGSRYMTGTTIYVDGAQSI 257
           ++  SD +RY+TG T+ +D    +
Sbjct: 262 LFFASDEARYITGVTLPIDAGSCL 285

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 29/263 (11%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKG-GQPVEVVGLD 64
           K  L+T  G  I   +A HL + G ++V+  N    +  AEK++  +K  G     +  D
Sbjct: 19  KVALVTGSGRGIGAAVAVHLGRLGAKVVV--NYANSTKDAEKVVSEIKALGSDAIAIKAD 76
Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
           + +  E    +  D+A    G+LD  V        G ++D   V E+EF ++  +N    
Sbjct: 77  IRQVPE--IVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKD---VTEEEFDRVFSLNTRGQ 131
Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGK 182
           +F+ +   R + E   GG IV LTS   ++    P          ++   VR  + + G 
Sbjct: 132 FFVAREAYRHLTE---GGRIV-LTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGD 187
Query: 183 HKIRVNGIARG------LHLQDEYPIAVGQ----ERAVKLVREAAPLHR--WLDVKNDLA 230
            KI VN +A G       H    + I  G     E+  ++   A+PLHR  W     D+A
Sbjct: 188 KKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGW---PQDVA 244
Query: 231 STVIYLISDGSRYMTGTTIYVDG 253
           + V +L+S    ++ G  + +DG
Sbjct: 245 NVVGFLVSKEGEWVNGKVLTLDG 267

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 13/258 (5%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-RRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K   +T  G  I   IA    + GC  V+      R+ + A K+ G+         + L 
Sbjct: 28  KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG----RRCLPLS 83
Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL-QVGEDEFKKLVKINFVAPW 123
           M+     A   AVD+A +  G +D  ++C    G    P   +  + FK ++ I+    +
Sbjct: 84  MDVRAPPAVMAAVDQALKEFGRIDILINCAA--GNFLCPAGALSFNAFKTVMDIDTSGTF 141
Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKH 183
            + + +  +      GG IV +T+ +G  RG             ++  + R  A+E G  
Sbjct: 142 NVSRVLYEKFFRDH-GGVIVNITATLG-NRG-QALQVHAGSAKAAVDAMTRHLAVEWGPQ 198
Query: 184 KIRVNGIARGLHLQDEYPIAVGQERAVKLVR-EAAPLHRWLDVKNDLASTVIYLISDGSR 242
            IRVN +A G     E    +G  +A    +  A+PL R L  K ++A +V+YL S  + 
Sbjct: 199 NIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQR-LGNKTEIAHSVLYLASPLAS 257
Query: 243 YMTGTTIYVDGAQSITRP 260
           Y+TG  +  DG   +T P
Sbjct: 258 YVTGAVLVADGGAWLTFP 275

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 118/252 (46%), Gaps = 18/252 (7%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVL--VGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
           K  L+T     I ++IA  LA+ G  + +   G++ +  +V E++    KG     +   
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKA--KGVDSFAIQAN 68
Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVA 121
             + D   A    + +     G+LD  V+     G  +D L  ++ E E+  ++  N   
Sbjct: 69  VADADEVKAM---IKEVVSQFGSLDVLVN---NAGITRDNLLMRMKEQEWDDVIDTNLKG 122
Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIG 181
            +  ++    +M   ++G +I+ L+S++GA     P           +  L ++AA E+ 
Sbjct: 123 VFNCIQKATPQMLRQRSG-AIINLSSVVGAVGN--PGQANYVATKAGVIGLTKSAARELA 179
Query: 182 KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 241
              I VN +A G  + D    A+  E   +++ +  PL R+     D+A+TV +L SD +
Sbjct: 180 SRGITVNAVAPGFIVSDMTD-ALSDELKEQMLTQI-PLARFGQ-DTDIANTVAFLASDKA 236
Query: 242 RYMTGTTIYVDG 253
           +Y+TG TI+V+G
Sbjct: 237 KYITGQTIHVNG 248

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 21/258 (8%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           K VL+T     I + IA   A+ G  + L         VAE + G+           +D+
Sbjct: 7   KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAF--------FQVDL 58
Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 125
           E++RE      V++A   LG +D  V+           L V   E+++++++N  AP  L
Sbjct: 59  EDERERV--RFVEEAAYALGRVDVLVNNAAIAAP-GSALTVRLPEWRRVLEVNLTAPMHL 115
Query: 126 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXX--XXXXSIHQLVRTAAMEIGKH 183
                R M++   GG+IV + S+    +GL+              +  L R+ A+++   
Sbjct: 116 SALAAREMRKV-GGGAIVNVASV----QGLFAEQENAAYNASKGGLVNLTRSLALDLAPL 170
Query: 184 KIRVNGIARGLHLQDEYPIAVG-QERAVKLVREAAPLH--RWLDVKNDLASTVIYLISDG 240
           +IRVN +A G    +    A+       +  R+   LH  R L    ++A  V++L S+ 
Sbjct: 171 RIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEK 230
Query: 241 SRYMTGTTIYVDGAQSIT 258
           + ++TG  + VDG  + +
Sbjct: 231 ASFITGAILPVDGGMTAS 248

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 104 LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXX 163
           L+ G ++FK+++ IN    + + K   R M  +K G SIVF  SI     G         
Sbjct: 111 LEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKG-SIVFTASISSFTAG-EGVSHVYT 168
Query: 164 XXXXSIHQLVRTAAMEIGKHKIRVNGIARGL----HLQDEYPIAVGQERAVKLVREAAPL 219
               ++  L  +   E+G++ IRVN ++  +     L D +   V   R  +L  +AA L
Sbjct: 169 ATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVF--GVDSSRVEELAHQAANL 226
Query: 220 HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRMRSYM 266
              L    D+A  V YL  D S+Y++G  + +DG  + T P   + +
Sbjct: 227 KGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTAL 273

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 109/250 (43%), Gaps = 15/250 (6%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEV-VGL 63
           K  ++T  G  I K IA   A  G  +V+   N    + V +++     GGQ       +
Sbjct: 12  KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEI--QQLGGQAFACRCDI 69
Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
             E++     D A+ K    LG +D  V+     G    P  +   +F++  ++N  + +
Sbjct: 70  TSEQELSALADFAISK----LGKVDILVN--NAGGGGPKPFDMPMADFRRAYELNVFSFF 123
Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKH 183
            L + V   M E   GG I+ +TS+    + +            +   LVR  A ++G+ 
Sbjct: 124 HLSQLVAPEM-EKNGGGVILTITSMAAENKNI--NMTSYASSKAAASHLVRNMAFDLGEK 180
Query: 184 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
            IRVNGIA G  L D     +  E   K+++   P+ R L    D+A+  ++L S  + +
Sbjct: 181 NIRVNGIAPGAILTDALKSVITPEIEQKMLQH-TPIRR-LGQPQDIANAALFLCSPAASW 238
Query: 244 MTGTTIYVDG 253
           ++G  + V G
Sbjct: 239 VSGQILTVSG 248

>pdb|3OJF|A Chain A, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl Carrier Protein Reductase With Nadp+ And Indole Naphthyridinone (Complex Form) Length = 257

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 16/246 (6%)
Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEA 76
           I+  IA  L   G +L+      RL     ++  +L+G + + V+  D+  D E      
Sbjct: 20  IAWGIARSLHNAGAKLIFTYAGERLERNVRELADTLEGQESL-VLPCDVTNDEE--LTAC 76
Query: 77  VDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPW----FLLKAVGRR 132
            +   Q +G +    HC  +  +  D L+    EF    +  F+       F L AV R 
Sbjct: 77  FETIKQEVGTIHGVAHCIAFANR--DDLK---GEFVDTSRDGFLLAQNISAFSLTAVARE 131
Query: 133 MKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKIRVNGIAR 192
            K+    G  +   + +G ER +            S+   V+  A ++G+H IRVN I+ 
Sbjct: 132 AKKVMTEGGNILTLTYLGGER-VVKNYNVMGVAKASLEASVKYLANDLGQHGIRVNAISA 190
Query: 193 GLHLQDEYPIAVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 251
           G  ++      VG   ++ + + E APL R    + ++  T ++L SD +R +TG  I+V
Sbjct: 191 G-PIRTLSAKGVGDFNSILREIEERAPLRR-TTTQEEVGDTAVFLFSDLARGVTGENIHV 248
Query: 252 DGAQSI 257
           D    I
Sbjct: 249 DSGYHI 254

>pdb|2QIO|A Chain A, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase From Bacillus Anthracis With Triclosan Length = 256

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 16/246 (6%)
Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEA 76
           I+  IA  L   G +L+      RL     ++  +L+G + + V+  D+  D E      
Sbjct: 20  IAWGIARSLHNAGAKLIFTYAGERLERNVRELADTLEGQESL-VLPCDVTNDEE--LTAC 76
Query: 77  VDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPW----FLLKAVGRR 132
            +   Q +G +    HC  +  +  D L+    EF    +  F+       F L AV R 
Sbjct: 77  FETIKQEVGTIHGVAHCIAFANR--DDLK---GEFVDTSRDGFLLAQNISAFSLTAVARE 131
Query: 133 MKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKIRVNGIAR 192
            K+    G  +   + +G ER +            S+   V+  A ++G+H IRVN I+ 
Sbjct: 132 AKKVMTEGGNILTLTYLGGER-VVKNYNVMGVAKASLEASVKYLANDLGQHGIRVNAISA 190
Query: 193 GLHLQDEYPIAVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 251
           G  ++      VG   ++ + + E APL R    + ++  T ++L SD +R +TG  I+V
Sbjct: 191 G-PIRTLSAKGVGDFNSILREIEERAPLRR-TTTQEEVGDTAVFLFSDLARGVTGENIHV 248
Query: 252 DGAQSI 257
           D    I
Sbjct: 249 DSGYHI 254

>pdb|3OIF|A Chain A, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B. Subtilis (Complex With Nad And Tcl) Length = 266

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 111/268 (41%), Gaps = 26/268 (9%)
Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEV 60
           +E +   V+  ++   I+  IA  L + G RL+      RL     ++ G+L     + +
Sbjct: 5   LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSI-I 63
Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ---DPLQVGEDEFKKLVKI 117
           +  D+  D E   +       + +G +    HC  +  K +   + L    D F     I
Sbjct: 64  LPCDVTNDAE--IETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNI 121
Query: 118 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAA 177
           +  +   ++KA    M E   GGSIV LT  +G E  + P          S+   V+  A
Sbjct: 122 SSYSLTAVVKAARPMMTE---GGSIVTLT-YLGGEL-VMPNYNVMGVAKASLDASVKYLA 176
Query: 178 MEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV-------KLVREAAPLHRWLDVKNDLA 230
            ++GK  IRVN I+ G       PI     + +       K + E APL R      ++ 
Sbjct: 177 ADLGKENIRVNSISAG-------PIRTLSAKGISDFNSILKDIEERAPLRR-TTTPEEVG 228
Query: 231 STVIYLISDGSRYMTGTTIYVDGAQSIT 258
            T  +L SD SR +TG  ++VD    IT
Sbjct: 229 DTAAFLFSDMSRGITGENLHVDSGFHIT 256

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 113/269 (42%), Gaps = 29/269 (10%)
Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
           Q K  ++T+    +    A  LA+ G RL+L    R     A   + SL  G  V++V  
Sbjct: 6   QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAG 65
Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHCY--TYEGKMQDPLQVGEDEFKKLVKINFVA 121
           D+ E   G  D   +KA   LG  D  V+       G+  +      DE  +L+  + V 
Sbjct: 66  DIRE--PGDIDRLFEKARD-LGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAV- 121
Query: 122 PWFLLKAVGRRMKES---KAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAM 178
            W     VGRR  E    K  G +V++ S+       +            +  +VRT A+
Sbjct: 122 -W-----VGRRAAEQMVEKGWGRMVYIGSVTLLRP--WQDLALSNIMRLPVIGVVRTLAL 173
Query: 179 EIGKHKIRVNGIARGLHLQDEYPIAVGQERA----------VKLVREAAPLHRWLDVKND 228
           E+  H + VN +   L L D    ++ +ERA          +K +    P+ R +    +
Sbjct: 174 ELAPHGVTVNAVLPSLILTDRVR-SLAEERARRSGITVEEALKSMASRIPMGR-VGKPEE 231
Query: 229 LASTVIYLISDGSRYMTGTTIYVDGAQSI 257
           LAS V +L S+ + ++TG  I VDG   I
Sbjct: 232 LASVVAFLASEKASFITGAVIPVDGGAHI 260

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 106/250 (42%), Gaps = 12/250 (4%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           K  L+T     +    A  LA  G R++L  N+ R + +AE +    + G     V  D+
Sbjct: 10  KTALVTGSARGLGFAYAEGLAAAGARVIL--NDIRATLLAESVDTLTRKGYDAHGVAFDV 67
Query: 66  EEDR--EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
            ++   E AF +   +   +    D  ++    + + +  +++  + ++K++  N  + +
Sbjct: 68  TDELAIEAAFSKLDAEGIHV----DILINNAGIQYR-KPMVELELENWQKVIDTNLTSAF 122
Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKH 183
            + ++  +RM    +GG I+ + S+    +   P           I  L  + A E  + 
Sbjct: 123 LVSRSAAKRMIARNSGGKIINIGSL--TSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQF 180
Query: 184 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
            I+ N I  G  L D     +  ++    V+ + P  RW     +L  T I+L S  S Y
Sbjct: 181 NIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRW-GRPEELIGTAIFLSSKASDY 239
Query: 244 MTGTTIYVDG 253
           + G  IYVDG
Sbjct: 240 INGQIIYVDG 249

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 14/194 (7%)
Query: 72  AFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 131
           A   AVD     LG LD  +       +     ++    ++ ++ +N    W   +    
Sbjct: 103 AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIP 162
Query: 132 RMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKIRVN--- 188
            +   K GGSIVF TS IG  RG              +H L+RT A+E+G   IRVN   
Sbjct: 163 HIMAGKRGGSIVF-TSSIGGLRGAE-NIGNYIASKHGLHGLMRTMALELGPRNIRVNIVC 220
Query: 189 --GIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDV-------KNDLASTVIYLISD 239
              +A  + L +        +     V +     R + V         D+++ +++L+SD
Sbjct: 221 PSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPIPYVEPADISNAILFLVSD 280
Query: 240 GSRYMTGTTIYVDG 253
            +RY+TG ++ VDG
Sbjct: 281 DARYITGVSLPVDG 294

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 116/253 (45%), Gaps = 20/253 (7%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVL--VGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
           K  L+T     I ++IA  LA+ G  + +   G++ +  +V E++         ++    
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 64
Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVA 121
           D +E +     E V +     G+LD  V+     G  +D L  +  E E+  ++  N   
Sbjct: 65  DADEVK-AXIKEVVSQ----FGSLDVLVN---NAGITRDNLLXRXKEQEWDDVIDTNLKG 116
Query: 122 PWFLL-KAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEI 180
            +  + KA  + +++    G+I+ L+S++GA     P           +  L ++AA E+
Sbjct: 117 VFNCIQKATPQXLRQRS--GAIINLSSVVGAVGN--PGQANYVATKAGVIGLTKSAAREL 172
Query: 181 GKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG 240
               I VN +A G  + D       + +   L +   PL R+     D+A+TV +L SD 
Sbjct: 173 ASRGITVNAVAPGFIVSDXTDALSDELKEQXLTQ--IPLARFGQ-DTDIANTVAFLASDK 229
Query: 241 SRYMTGTTIYVDG 253
           ++Y+TG TI+V+G
Sbjct: 230 AKYITGQTIHVNG 242

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 113/262 (43%), Gaps = 37/262 (14%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K VL+T     I +      AK G RLV     E  L   AE +     G  PV V  + 
Sbjct: 6   KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----GAHPV-VXDVA 59
Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQD------PLQVGEDEFKKLVKIN 118
                E  F EA+      LG LD  VH   Y G  +D      PL+    +++ ++++N
Sbjct: 60  DPASVERGFAEALAH----LGRLDGVVH---YAGITRDNFHWKXPLE----DWELVLRVN 108
Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAM 178
               + + KA     +E   G  ++  + +     G              +  L RT A+
Sbjct: 109 LTGSFLVAKAASEAXREKNPGSIVLTASRVYLGNLG----QANYAASXAGVVGLTRTLAL 164
Query: 179 EIGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY 235
           E+G+  IRVN +A G        + P  V +E+A+     A PL R      ++A   ++
Sbjct: 165 ELGRWGIRVNTLAPGFIETRXTAKVPEKV-REKAIA----ATPLGR-AGKPLEVAYAALF 218
Query: 236 LISDGSRYMTGTTIYVDGAQSI 257
           L+SD S ++TG  ++VDG ++I
Sbjct: 219 LLSDESSFITGQVLFVDGGRTI 240

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 107/254 (42%), Gaps = 14/254 (5%)
Query: 7   RVLLTSDGDE-ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           RV L + G   +   IA  LA+ GC +V+       +S A + +    G   VE +    
Sbjct: 22  RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG---VETMAFRC 78
Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM---QDPLQVGEDEFKKLVKINFVAP 122
           +        + ++   +  G LD  V+      +    + PL    DEF++++++N    
Sbjct: 79  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPL----DEFRQVIEVNLFGT 134
Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGK 182
           +++ +     ++ES    SI+ + S+   E    P           +  L +  A E G+
Sbjct: 135 YYVCREAFSLLRESD-NPSIINIGSLT-VEEVTMPNISAYAASKGGVASLTKALAKEWGR 192
Query: 183 HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 242
           + IRVN IA G +              +  + +  PL R   V  DL    ++L S+ ++
Sbjct: 193 YGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGR-TGVPEDLKGVAVFLASEEAK 251
Query: 243 YMTGTTIYVDGAQS 256
           Y+TG  I+VDG  +
Sbjct: 252 YVTGQIIFVDGGWT 265

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 110/251 (43%), Gaps = 24/251 (9%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K  L+T     I   IA  L K G ++++ G NE +L S+      +LK    +EV  L 
Sbjct: 15  KTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGN----ALKDNYTIEVCNLA 70
Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKKLVKINFVAP 122
            +E+      +          NLD  V C    G   D L +   + +F K++ IN  A 
Sbjct: 71  NKEECSNLISKT--------SNLDILV-CNA--GITSDTLAIRMKDQDFDKVIDINLKAN 119
Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGK 182
           + L +   ++M + + G  I+ ++SI+G      P           +  + ++ + E+  
Sbjct: 120 FILNREAIKKMIQKRYG-RIINISSIVGIAGN--PGQANYCASKAGLIGMTKSLSYEVAT 176
Query: 183 HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 242
             I VN +A G    D        E+  + + +  PL  +  +  D+A  V +L S+ + 
Sbjct: 177 RGITVNAVAPGFIKSDMTDKL--NEKQREAIVQKIPLGTY-GIPEDVAYAVAFLASNNAS 233
Query: 243 YMTGTTIYVDG 253
           Y+TG T++V+G
Sbjct: 234 YITGQTLHVNG 244

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 115/258 (44%), Gaps = 21/258 (8%)
Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEV 60
           M  Q K  L+T     I + IA  L + G   V++G     S  AEK+  +LK    VE 
Sbjct: 23  MSLQGKVALVTGASRGIGQAIALELGRLGA--VVIGTATSASG-AEKIAETLKA-NGVEG 78
Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKKLVKIN 118
            GL ++   + +    ++   Q LG     V+     G  +D L V   +DE+  +V  N
Sbjct: 79  AGLVLDVSSDESVAATLEHIQQHLGQPLIVVNN---AGITRDNLLVRMKDDEWFDVVNTN 135
Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAM 178
             + + L KAV R M +++ G  I+ + S++GA                 +    R  A 
Sbjct: 136 LNSLYRLSKAVLRGMTKARWG-RIINIGSVVGAMG--NAGQTNYAAAKAGLEGFTRALAR 192
Query: 179 EIGKHKIRVNGIARGLHLQD---EYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY 235
           E+G   I VN +A G    D   E P A   +R   L +   PL R L    ++A  V +
Sbjct: 193 EVGSRAITVNAVAPGFIDTDMTRELPEA---QREALLGQ--IPLGR-LGQAEEIAKVVGF 246
Query: 236 LISDGSRYMTGTTIYVDG 253
           L SDG+ Y+TG T+ V+G
Sbjct: 247 LASDGAAYVTGATVPVNG 264

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 16/260 (6%)
Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVE 59
           M  + K  ++T  G  I +  A  LA+ G  +V+   N     +VA++++    GG  + 
Sbjct: 5   MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD--GGTAIS 62
Query: 60  VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKI 117
           V  +D+  D E A   A D+     G +D  V+     G  K+   L +  + +KK + +
Sbjct: 63  VA-VDVS-DPESAKAMA-DRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSV 119
Query: 118 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAA 177
           N     +  +AV ++M + + GG+IV  +S        Y            I+ L +  +
Sbjct: 120 NLDGALWCTRAVYKKMTK-RGGGAIVNQSSTAAWLYSNY-----YGLAKVGINGLTQQLS 173
Query: 178 MEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI 237
            E+G   IR+N IA G  +  E       +  V  + +  PL R +   +DL    ++L+
Sbjct: 174 RELGGRNIRINAIAPG-PIDTEANRTTTPKEMVDDIVKGLPLSR-MGTPDDLVGMCLFLL 231
Query: 238 SDGSRYMTGTTIYVDGAQSI 257
           SD + ++TG    VDG Q I
Sbjct: 232 SDEASWITGQIFNVDGGQII 251

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 112/259 (43%), Gaps = 13/259 (5%)
Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-RRLSSVAEKMMGSLKGGQPVEVVG 62
           Q +  ++T     I K I   L + G  +V+   +  RL S A+++  +L   +   V+ 
Sbjct: 17  QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIP 76
Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQ-VGEDEFKKLVKINFVA 121
           +      E   +  V       G ++  V+     G+   P + +    +  +++ N   
Sbjct: 77  IQCNIRNEEEVNNLVKSTLDTFGKINFLVN--NGGGQFLSPAEHISSKGWHAVLETNLTG 134
Query: 122 PWFLLKAV-GRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEI 180
            +++ KAV    MKE   GGSIV   +II   +  +P           ++ L ++ A+E 
Sbjct: 135 TFYMCKAVYSSWMKEH--GGSIV---NIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEW 189
Query: 181 GKHKIRVNGIARGLHLQDEYPIAVGQ--ERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 238
               IR+N +A G+          G   +   +   +  P  R + V  +++S V +L+S
Sbjct: 190 ACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKR-IGVPEEVSSVVCFLLS 248
Query: 239 DGSRYMTGTTIYVDGAQSI 257
             + ++TG ++ VDG +S+
Sbjct: 249 PAASFITGQSVDVDGGRSL 267

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 15/258 (5%)
Query: 5   AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           +K  ++T     I + I+  LA  G  + +    ++    AE +       Q    VGLD
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61
Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           + +  +  FD A+D+A + LG  D  V+      +++  L+V E++ K++  +N  + +F
Sbjct: 62  VTD--KANFDSAIDEAAEKLGGFDVLVNNAGI-AQIKPLLEVTEEDLKQIYSVNVFSVFF 118
Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHK 184
            ++A  R+  E    G I+   SI   +   +P          ++  L + AA E+    
Sbjct: 119 GIQAASRKFDELGVKGKIINAASIAAIQG--FPILSAYSTTKFAVRGLTQAAAQELAPKG 176
Query: 185 IRVNGIARGL-------HLQDEYPIAVGQE--RAVKLVREAAPLHRWLDVKNDLASTVIY 235
             VN  A G+        +  E     G+      K    +  L R   V  D+A  V +
Sbjct: 177 HTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRP-SVPEDVAGLVSF 235
Query: 236 LISDGSRYMTGTTIYVDG 253
           L S+ S Y+TG  + VDG
Sbjct: 236 LASENSNYVTGQVMLVDG 253

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 113/259 (43%), Gaps = 18/259 (6%)
Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
           Q K  L+T     + K  A  LA+ G  +V+        + A     +L+  + +E +G+
Sbjct: 3   QNKCALVTGSSRGVGKAAAIRLAENGYNIVI--------NYARSKKAALETAEEIEKLGV 54
Query: 64  DM-----EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKIN 118
            +        +     E   +  +  G LD FV+     G ++  +++ E  +   + IN
Sbjct: 55  KVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVN-NAASGVLRPVMELEETHWDWTMNIN 113
Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAM 178
             A  F  +   + M E   GG IV ++S+ G+ R L            ++  L R  A+
Sbjct: 114 AKALLFCAQEAAKLM-EKNGGGHIVSISSL-GSIRYL-ENYTTVGVSKAALEALTRYLAV 170
Query: 179 EIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 238
           E+   +I VN ++ G    D       +E  ++  R+  P  R +++K D+  TV +L+S
Sbjct: 171 ELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIK-DMVDTVEFLVS 229
Query: 239 DGSRYMTGTTIYVDGAQSI 257
             +  + G TI VDG +S+
Sbjct: 230 SKADMIRGQTIIVDGGRSL 248

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 26/256 (10%)
Query: 10  LTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDR 69
           +T  G  I   I    A  G RL+L+  E      A + +G+    + V  V  D E   
Sbjct: 16  VTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADV-TDAEAMT 74
Query: 70  EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAV 129
             A +        IL N            ++ D L+  +  +++++ +N    ++  +A 
Sbjct: 75  AAAAEAEAVAPVSILVNSAGIA-------RLHDALETDDATWRQVMAVNVDGMFWASRAF 127
Query: 130 GRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKIRVNG 189
           GR M  ++  G+IV L S+ G                 ++HQL R  A E     +RVN 
Sbjct: 128 GRAMV-ARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNA 186
Query: 190 IARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVK--------NDLASTVIYLISDGS 241
           +A G          V  E  +K+         WLD+         +++A+  ++L S  +
Sbjct: 187 LAPGY---------VATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAA 237
Query: 242 RYMTGTTIYVDGAQSI 257
            Y+TG  + VDG  ++
Sbjct: 238 SYVTGAILAVDGGYTV 253

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 19/257 (7%)
Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
            A+ VL+T     I + IA   A+ G  + +   + R LSSV  ++ G L  G    V+G
Sbjct: 40  SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAEL-GELGAGN---VIG 95
Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTY----EGKMQDPLQVGEDEFKKLVKIN 118
           + ++    G+  +A        G LD  V C       E ++     +  ++  +++ +N
Sbjct: 96  VRLDVSDPGSCADAARTVVDAFGALD--VVCANAGIFPEARLD---TMTPEQLSEVLDVN 150
Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAM 178
                + ++A    +  S  G  ++  +SI G   G YP          +    +RTAA+
Sbjct: 151 VKGTVYTVQACLAPLTASGRG-RVILTSSITGPVTG-YPGWSHYGASKAAQLGFMRTAAI 208
Query: 179 EIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 238
           E+    + VN I  G ++  E  + +G+E    + R + P+   L    D+     +L +
Sbjct: 209 ELAPRGVTVNAILPG-NILTEGLVDMGEEYISGMAR-SIPMG-MLGSPVDIGHLAAFLAT 265
Query: 239 DGSRYMTGTTIYVDGAQ 255
           D + Y+TG  I VDG Q
Sbjct: 266 DEAGYITGQAIVVDGGQ 282

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 114/256 (44%), Gaps = 16/256 (6%)
Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK-GGQPVE 59
           M+   K VL+T     I   IA  LA  G ++ +  N R  + VA+ +   L+  G    
Sbjct: 25  MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWI--NYRSNAEVADALKNELEEKGYKAA 82
Query: 60  VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVG--EDEFKKLVKI 117
           V+  D   + +  F EA+    Q  G L   V+     G ++D L +    ++F  ++  
Sbjct: 83  VIKFDAASESD--FIEAIQTIVQSDGGLSYLVNN---AGVVRDKLAIKMKTEDFHHVIDN 137
Query: 118 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAA 177
           N  + +   +   + M +S+ G S+V + SIIG ERG              I  + ++ A
Sbjct: 138 NLTSAFIGCREALKVMSKSRFG-SVVNVASIIG-ERGNMGQTNYSASKGGMI-AMSKSFA 194
Query: 178 MEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI 237
            E     IR N +  G  ++ +    +  E     V+   PL+R    K ++A  V +L+
Sbjct: 195 YEGALRNIRFNSVTPGF-IETDMNANLKDELKADYVKNI-PLNRLGSAK-EVAEAVAFLL 251
Query: 238 SDGSRYMTGTTIYVDG 253
           SD S Y+TG T+ V+G
Sbjct: 252 SDHSSYITGETLKVNG 267

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 109 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXS 168
           + F+K+V+IN    +  +K V   MK++  GGSIV ++S  G   GL             
Sbjct: 101 ERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSAAGL-MGL-ALTSSYGASKWG 157
Query: 169 IHQLVRTAAMEIGKHKIRVNGIARGLH---LQDEYPIAVGQERAVKLVREAAPLHRWLDV 225
           +  L + AA+E+G  +IRVN +  G+    +  E  I  G+           P+ R  + 
Sbjct: 158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPN-----TPMGRVGNE 212
Query: 226 KNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRMRSYM 266
             ++A  V+ L+SD S Y+TG  + VDG  + T P ++  M
Sbjct: 213 PGEIAGAVVKLLSDTSSYVTGAELAVDGGWT-TGPTVKYVM 252

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 101/253 (39%), Gaps = 11/253 (4%)
Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
           Q + V++T     I + IA   A+ G  + + G            +  L  G+   V+G+
Sbjct: 9   QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGK---VIGV 65
Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL-QVGEDEFKKLVKINFVAP 122
             +       D    +A +  G +D  V C         PL  +  ++   +  +N    
Sbjct: 66  QTDVSDRAQCDALAGRAVEEFGGID--VVCANAGVFPDAPLATMTPEQLNGIFAVNVNGT 123
Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGK 182
           ++ ++A    +  S +G  +V  +SI G   G YP          +    +RTAA+E+  
Sbjct: 124 FYAVQACLDALIASGSG-RVVLTSSITGPITG-YPGWSHYGATKAAQLGFMRTAAIELAP 181
Query: 183 HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 242
           HKI VN I  G ++  E  +  G+E    + R        L    D+     +L +  + 
Sbjct: 182 HKITVNAIMPG-NIMTEGLLENGEEYIASMARSIP--AGALGTPEDIGHLAAFLATKEAG 238
Query: 243 YMTGTTIYVDGAQ 255
           Y+TG  I VDG Q
Sbjct: 239 YITGQAIAVDGGQ 251

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 108/249 (43%), Gaps = 18/249 (7%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           ++ L+T     I + IA  L  RG R+ +       S   E+   SL G  P+     D+
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIA------SRNPEEAAQSL-GAVPLPT---DL 52
Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 125
           E+D        V +A + LG L   VH      + +  L++  +E+++++ ++    + L
Sbjct: 53  EKDDPKGL---VKRALEALGGLHVLVHAAAVNVR-KPALELSYEEWRRVLYLHLDVAFLL 108
Query: 126 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKI 185
            +A    M E+   G ++F+ S+     G             ++  L R  A E  +  I
Sbjct: 109 AQAAAPHMAEA-GWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGI 167
Query: 186 RVNGIARGLHLQDEYPIAVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
           RVN +  G +++ E+ + + Q   + + +    P+ RW     ++A     L  D + Y+
Sbjct: 168 RVNLLCPG-YVETEFTLPLRQNPELYEPITARIPMGRWAR-PEEIARVAAVLCGDEAEYL 225
Query: 245 TGTTIYVDG 253
           TG  + VDG
Sbjct: 226 TGQAVAVDG 234

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 9/149 (6%)
Query: 109 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXS 168
           +++  ++ INF A + L       +K S+ G ++VF++S+ GA     P          +
Sbjct: 109 EDYSLIMSINFEAAYHLSVLAHPFLKASERG-NVVFISSVSGALA--VPYEAVYGATKGA 165
Query: 169 IHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKLVREAAPLHRWLD 224
           + QL R  A E  K  IRVNG+  G+       + +     +E   KL+   A L R  +
Sbjct: 166 MDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA-LRRMGE 224
Query: 225 VKNDLASTVIYLISDGSRYMTGTTIYVDG 253
            K +LA+ V +L    + Y+TG  IYVDG
Sbjct: 225 PK-ELAAMVAFLCFPAASYVTGQIIYVDG 252

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 9/149 (6%)
Query: 109 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXS 168
           +++  ++ INF A + L       +K S+ G ++VF++S+ GA     P          +
Sbjct: 108 EDYSLIMSINFEAAYHLSVLAHPFLKASERG-NVVFISSVSGALA--VPYEAVYGATKGA 164
Query: 169 IHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKLVREAAPLHRWLD 224
           + QL R  A E  K  IRVNG+  G+       + +     +E   KL+   A L R  +
Sbjct: 165 MDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA-LRRMGE 223
Query: 225 VKNDLASTVIYLISDGSRYMTGTTIYVDG 253
            K +LA+ V +L    + Y+TG  IYVDG
Sbjct: 224 PK-ELAAMVAFLCFPAASYVTGQIIYVDG 251

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 36/266 (13%)
Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN--ERRLSSVAEKMMGSLKGGQPV 58
           M+ + K  ++T     + K IA+ L   G  +VL G+     L + AE+   +   G  V
Sbjct: 1   MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA---GINV 57
Query: 59  EVVGLDME--EDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKL 114
            V   D++  ED E     A+D      G +D  V+     G  +D L  ++ E ++  +
Sbjct: 58  VVAKGDVKNPEDVENMVKTAMDA----FGRIDILVN---NAGITRDTLMLKMSEKDWDDV 110
Query: 115 VKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG----AERGLYPXXXXXXXXXXSIH 170
           +  N  + +   KAV + M + K+G  I+ +TSI G    A +  Y            + 
Sbjct: 111 LNTNLKSAYLCTKAVSKIMLKQKSG-KIINITSIAGIIGNAGQANY------AASKAGLI 163
Query: 171 QLVRTAAMEIGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKN 227
              ++ A E     I  N +A G+    + D  P     ++  ++     PL R+     
Sbjct: 164 GFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLP-----DKVKEMYLNNIPLKRF-GTPE 217
Query: 228 DLASTVIYLISDGSRYMTGTTIYVDG 253
           ++A+ V +L SD S Y+TG  I +DG
Sbjct: 218 EVANVVGFLASDDSNYITGQVINIDG 243

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 114/249 (45%), Gaps = 18/249 (7%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           +RVL+T  G  I +     L   G R+V V   +  L S+  +  G       +E V +D
Sbjct: 8   RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-------IEPVCVD 60
Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           + +       EA ++A   +G +D  V+       +Q  L+V ++ F +  ++N  A   
Sbjct: 61  LGDW------EATERALGSVGPVDLLVNNAAV-ALLQPFLEVTKEAFDRSFEVNLRAVIQ 113
Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHK 184
           + + V R +      G+IV ++S   ++R +            ++  L +  A+E+G HK
Sbjct: 114 VSQIVARGLIARGVPGAIVNVSSQC-SQRAVT-NHSVYCSTKGALDMLTKVMALELGPHK 171
Query: 185 IRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
           IRVN +   + +              K +    PL ++ +V++ + + +++L+SD S   
Sbjct: 172 IRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEH-VVNAILFLLSDRSGMT 230
Query: 245 TGTTIYVDG 253
           TG+T+ V+G
Sbjct: 231 TGSTLPVEG 239

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 114/249 (45%), Gaps = 18/249 (7%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           +RVL+T  G  I +     L   G R+V V   +  L S+  +  G       +E V +D
Sbjct: 8   RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-------IEPVCVD 60
Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           + +       EA ++A   +G +D  V+       +Q  L+V ++ F +  ++N  A   
Sbjct: 61  LGDW------EATERALGSVGPVDLLVNNAAV-ALLQPFLEVTKEAFDRSFEVNLRAVIQ 113
Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHK 184
           + + V R +      G+IV ++S   ++R +            ++  L +  A+E+G HK
Sbjct: 114 VSQIVARGLIARGVPGAIVNVSSQX-SQRAVT-NHSVYCSTKGALDMLTKVMALELGPHK 171
Query: 185 IRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
           IRVN +   + +              K +    PL ++ +V++ + + +++L+SD S   
Sbjct: 172 IRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEH-VVNAILFLLSDRSGMT 230
Query: 245 TGTTIYVDG 253
           TG+T+ V+G
Sbjct: 231 TGSTLPVEG 239

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 112/246 (45%), Gaps = 27/246 (10%)
Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVE---VVGLDMEEDREGAF 73
           +S+++      RG  L +    R  +   +K+  + + G+P E    V  D+ +  +   
Sbjct: 20  MSRSVLVTGGNRGIGLAIA---RAFADAGDKVAITYRSGEPPEGFLAVKCDITDTEQ--V 74
Query: 74  DEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAVGR 131
           ++A  +  +  G ++  +      G  +D L  ++ E++F  +V+ N    + ++K   R
Sbjct: 75  EQAYKEIEETHGPVEVLI---ANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANR 131
Query: 132 RMKESKAGGSIVFLTSIIG----AERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKIRV 187
            M  +K G  +V ++S++G    A +  Y            +    R+ A E+G   I  
Sbjct: 132 AMLRAKKG-RVVLISSVVGLLGSAGQANY------AASKAGLVGFARSLARELGSRNITF 184
Query: 188 NGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGT 247
           N +A G    D   +   ++RA  +V +  PL R+     ++A+TV +L SD + Y+TG 
Sbjct: 185 NVVAPGFVDTDMTKVLTDEQRA-NIVSQV-PLGRYAR-PEEIAATVRFLASDDASYITGA 241
Query: 248 TIYVDG 253
            I VDG
Sbjct: 242 VIPVDG 247

>pdb|4FS3|A Chain A, Crystal Structure Of Staphylococcus Aureus Enoyl-Acp Reductase In Complex With Nadp And Afn-1252 Length = 256

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 114/261 (43%), Gaps = 24/261 (9%)
Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQP-VE 59
           +EN+   ++  ++   I+  +A  L + G +LV    + R     EK++  L   QP   
Sbjct: 4   LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN--QPEAH 61
Query: 60  VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL-QVGEDEFKKLVKIN 118
           +  +D++ D E       ++  + +GN+D   H   +   M+D   +  E   +  +   
Sbjct: 62  LYQIDVQSDEE--VINGFEQIGKDVGNIDGVYHSIAF-ANMEDLRGRFSETSREGFLLAQ 118
Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAM 178
            ++ + L        K    GGSIV  T+ +G E  +            S+   V+  A+
Sbjct: 119 DISSYSLTIVAHEAKKLMPEGGSIV-ATTYLGGEFAV-QNYNVMGVAKASLEANVKYLAL 176
Query: 179 EIGKHKIRVNGIARGLHLQDEYPIAV-------GQERAVKLVREAAPLHRWLDVKNDLAS 231
           ++G   IRVN I+ G       PI         G    +K ++E APL R +D + ++  
Sbjct: 177 DLGPDNIRVNAISAG-------PIRTLSAKGVGGFNTILKEIKERAPLKRNVD-QVEVGK 228
Query: 232 TVIYLISDGSRYMTGTTIYVD 252
           T  YL+SD S  +TG  I+VD
Sbjct: 229 TAAYLLSDLSSGVTGENIHVD 249

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 24/198 (12%)
Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYE--GKMQDPLQVGEDEFKKLVKIN 118
           V LD+ +  +  +  AVD A    G L   V+       G ++D       E+++++ +N
Sbjct: 58  VHLDVTQPAQ--WKAAVDTAVTAFGGLHVLVNNAGILNIGTIED---YALTEWQRILDVN 112
Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAM 178
               +  ++AV + MKE+  G SI+ ++SI G    +            ++  L ++ A+
Sbjct: 113 LTGVFLGIRAVVKPMKEAGRG-SIINISSIEGLAGTV--ACHGYTATKFAVRGLTKSTAL 169
Query: 179 EIGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY 235
           E+G   IRVN I  GL    + D  P  + Q     L R A P+        ++++ V+Y
Sbjct: 170 ELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQ---TALGRAAEPV--------EVSNLVVY 218
Query: 236 LISDGSRYMTGTTIYVDG 253
           L SD S Y TG    VDG
Sbjct: 219 LASDESSYSTGAEFVVDG 236

>pdb|4ALI|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P1) Length = 282

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 113/261 (43%), Gaps = 24/261 (9%)
Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQP-VE 59
           +EN+   ++  ++   I+  +A  L + G +LV    + R     EK++  L   QP   
Sbjct: 30  LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN--QPEAH 87
Query: 60  VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL-QVGEDEFKKLVKIN 118
           +  +D++ D E       ++  + +GN+D   H   +   M+D   +  E   +  +   
Sbjct: 88  LYQIDVQSDEE--VINGFEQIGKDVGNIDGVYHSIAF-ANMEDLRGRFSETSREGFLLAQ 144
Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAM 178
            ++ + L        K    GGSIV  T+ +G E  +            S+   V+  A+
Sbjct: 145 DISSYSLTIVAHEAKKLMPEGGSIV-ATTYLGGEFAV-QNYNVMGVAKASLEANVKYLAL 202
Query: 179 EIGKHKIRVNGIARGLHLQDEYPIAV-------GQERAVKLVREAAPLHRWLDVKNDLAS 231
           ++G   IRVN I+ G       PI         G    +K + E APL R +D + ++  
Sbjct: 203 DLGPDNIRVNAISAG-------PIRTLSAKGVGGFNTILKEIEERAPLKRNVD-QVEVGK 254
Query: 232 TVIYLISDGSRYMTGTTIYVD 252
           T  YL+SD S  +TG  I+VD
Sbjct: 255 TAAYLLSDLSSGVTGENIHVD 275

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 13/161 (8%)
Query: 109 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXS 168
           + F+K+V+IN    +  +K V   MK++  GGSIV ++S  G   GL             
Sbjct: 101 ERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSAAGL-MGL-ALTSSYGASKWG 157
Query: 169 IHQLVRTAAMEIGKHKIRVNGIARGLH---LQDEYPIAVGQERAVKLVREAAPLHRWLDV 225
           +  L + AA+E+G  +IRVN +  G+    +  E  I  G+           P+ R +  
Sbjct: 158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGN-----YPNTPMGR-VGE 211
Query: 226 KNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRMRSYM 266
             ++A  V+ L+SD S Y+TG  + VDG  + T P ++  M
Sbjct: 212 PGEIAGAVVKLLSDTSSYVTGAELAVDGGWT-TGPTVKYVM 251

>pdb|3GNT|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (Two Molecules In Au) Length = 256

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 113/261 (43%), Gaps = 24/261 (9%)
Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQP-VE 59
           +EN+   ++  ++   I+  +A  L + G +LV    + R     EK++  L   QP   
Sbjct: 4   LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN--QPEAH 61
Query: 60  VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL-QVGEDEFKKLVKIN 118
           +  +D++ D E       ++  + +GN+D   H   +   M+D   +  E   +  +   
Sbjct: 62  LYQIDVQSDEE--VINGFEQIGKDVGNIDGVYHSIAF-ANMEDLRGRFSETSREGFLLAQ 118
Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAM 178
            ++ + L        K    GGSIV  T+ +G E  +            S+   V+  A+
Sbjct: 119 DISSYSLTIVAHEAKKLMPEGGSIV-ATTYLGGEFAV-QNYNVMGVAKASLEANVKYLAL 176
Query: 179 EIGKHKIRVNGIARGLHLQDEYPIAV-------GQERAVKLVREAAPLHRWLDVKNDLAS 231
           ++G   IRVN I+ G       PI         G    +K + E APL R +D + ++  
Sbjct: 177 DLGPDNIRVNAISAG-------PIRTLSAKGVGGFNTILKEIEERAPLKRNVD-QVEVGK 228
Query: 232 TVIYLISDGSRYMTGTTIYVD 252
           T  YL+SD S  +TG  I+VD
Sbjct: 229 TAAYLLSDLSSGVTGENIHVD 249

>pdb|4ALL|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P212121) Length = 277

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 113/261 (43%), Gaps = 24/261 (9%)
Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQP-VE 59
           +EN+   ++  ++   I+  +A  L + G +LV    + R     EK++  L   QP   
Sbjct: 25  LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN--QPEAH 82
Query: 60  VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL-QVGEDEFKKLVKIN 118
           +  +D++ D E       ++  + +GN+D   H   +   M+D   +  E   +  +   
Sbjct: 83  LYQIDVQSDEE--VINGFEQIGKDVGNIDGVYHSIAF-ANMEDLRGRFSETSREGFLLAQ 139
Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAM 178
            ++ + L        K    GGSIV  T+ +G E  +            S+   V+  A+
Sbjct: 140 DISSYSLTIVAHEAKKLMPEGGSIV-ATTYLGGEFAV-QNYNVMGVAKASLEANVKYLAL 197
Query: 179 EIGKHKIRVNGIARGLHLQDEYPIAV-------GQERAVKLVREAAPLHRWLDVKNDLAS 231
           ++G   IRVN I+ G       PI         G    +K + E APL R +D + ++  
Sbjct: 198 DLGPDNIRVNAISAG-------PIRTLSAKGVGGFNTILKEIEERAPLKRNVD-QVEVGK 249
Query: 232 TVIYLISDGSRYMTGTTIYVD 252
           T  YL+SD S  +TG  I+VD
Sbjct: 250 TAAYLLSDLSSGVTGENIHVD 270

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 114/254 (44%), Gaps = 21/254 (8%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           ++ L+T     I + IA  LA+ G  L +   + R  +         +G   V V+G ++
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61
Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKKLVKINFVAPW 123
            E    A    V +A ++LG LD  V+     G  +D L V   +++++ +++ N  A +
Sbjct: 62  LEAE--AATALVHQAAEVLGGLDTLVNN---AGITRDTLLVRMKDEDWEAVLEANLSAVF 116
Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKH 183
              +   + M +++ G  IV +TS++G      P           +    R  A E  + 
Sbjct: 117 RTTREAVKLMMKARFG-RIVNITSVVGILGN--PGQANYVASKAGLIGFTRAVAKEYAQR 173
Query: 184 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREA----APLHRWLDVKNDLASTVIYLISD 239
            I VN +A G  ++ E       ER  + V+EA     P  R+     ++A  V +L+S+
Sbjct: 174 GITVNAVAPGF-IETEM-----TERLPQEVKEAYLKQIPAGRF-GRPEEVAEAVAFLVSE 226
Query: 240 GSRYMTGTTIYVDG 253
            + Y+TG T+ VDG
Sbjct: 227 KAGYITGQTLCVDG 240

>pdb|3GNS|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (One Molecule In Au) Length = 260

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 113/261 (43%), Gaps = 24/261 (9%)
Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQP-VE 59
           +EN+   ++  ++   I+  +A  L + G +LV    + R     EK++  L   QP   
Sbjct: 8   LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN--QPEAH 65
Query: 60  VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL-QVGEDEFKKLVKIN 118
           +  +D++ D E       ++  + +GN+D   H   +   M+D   +  E   +  +   
Sbjct: 66  LYQIDVQSDEE--VINGFEQIGKDVGNIDGVYHSIAF-ANMEDLRGRFSETSREGFLLAQ 122
Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAM 178
            ++ + L        K    GGSIV  T+ +G E  +            S+   V+  A+
Sbjct: 123 DISSYSLTIVAHEAKKLMPEGGSIV-ATTYLGGEFAV-QNYNVMGVAKASLEANVKYLAL 180
Query: 179 EIGKHKIRVNGIARGLHLQDEYPIAV-------GQERAVKLVREAAPLHRWLDVKNDLAS 231
           ++G   IRVN I+ G       PI         G    +K + E APL R +D + ++  
Sbjct: 181 DLGPDNIRVNAISAG-------PIRTLSAKGVGGFNTILKEIEERAPLKRNVD-QVEVGK 232
Query: 232 TVIYLISDGSRYMTGTTIYVD 252
           T  YL+SD S  +TG  I+VD
Sbjct: 233 TAAYLLSDLSSGVTGENIHVD 253

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 112/257 (43%), Gaps = 25/257 (9%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           K +L+T     I +      A+ G  LV V  E RL + A   + +        V  +  
Sbjct: 7   KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEA---IAVVADVSD 63
Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPW 123
            +  E  F EA+++     G L    H   + G     L   +  + ++K++++N    +
Sbjct: 64  PKAVEAVFAEALEE----FGRLHGVAH---FAGVAHSALSWNLPLEAWEKVLRVNLTGSF 116
Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIG-AERGLYPXXXXXXXXXXSIHQLVRTAAMEIGK 182
            + +  G  ++E   GGS+V   S+ G    GL             +  L RT A+E+ +
Sbjct: 117 LVARKAGEVLEE---GGSLVLTGSVAGLGAFGL----AHYAAGKLGVVGLARTLALELAR 169
Query: 183 HKIRVNGIARGLHLQDEYPIAVG-QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 241
             +RVN +  GL    + P+  G    A +    A+PL R      ++A   ++L+S+ S
Sbjct: 170 KGVRVNVLLPGL---IQTPMTAGLPPWAWEQEVGASPLGR-AGRPEEVAQAALFLLSEES 225
Query: 242 RYMTGTTIYVDGAQSIT 258
            Y+TG  +YVDG +SI 
Sbjct: 226 AYITGQALYVDGGRSIV 242

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 118/253 (46%), Gaps = 16/253 (6%)
Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-RRLSSVAEKMMGSLKGGQPVEVVG 62
           Q K  L+T     I + IA  LA  G  +++ G    R  +VAE++         V+  G
Sbjct: 6   QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY----GVKAHG 61
Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFV 120
           ++M    E + ++A ++   ++  +D  V+     G  +D L  ++   ++++++K+N  
Sbjct: 62  VEMNLLSEESINKAFEEIYNLVDGIDILVNN---AGITRDKLFLRMSLLDWEEVLKVNLT 118
Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEI 180
             + + +   R+M + + G  IV ++S++G    +             +    ++ A E+
Sbjct: 119 GTFLVTQNSLRKMIKQRWG-RIVNISSVVGFTGNV--GQVNYSTTKAGLIGFTKSLAKEL 175
Query: 181 GKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG 240
               + VN +A G    D    AV  E   +  +E  PL R+     ++A+ V++L S+ 
Sbjct: 176 APRNVLVNAVAPGFIETD--MTAVLSEEIKQKYKEQIPLGRF-GSPEEVANVVLFLCSEL 232
Query: 241 SRYMTGTTIYVDG 253
           + Y+TG  I+V+G
Sbjct: 233 ASYITGEVIHVNG 245

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 19/150 (12%)
Query: 111 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG----AERGLYPXXXXXXXXX 166
           F++++++N  A   +L +   R   ++ GGSI+ + S+      A+R  Y          
Sbjct: 100 FERVLRLNLSAA--MLASQLARPLLAQRGGSILNIASMYSTFGSADRPAY------SASK 151
Query: 167 XSIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR---EAAPLHRWL 223
            +I QL R+ A E    +IRVN IA G     + P+  G +  V+  R   +  PL RW 
Sbjct: 152 GAIVQLTRSLACEYAAERIRVNAIAPGWI---DTPLGAGLKADVEATRRIMQRTPLARWG 208
Query: 224 DVKNDLASTVIYLISDGSRYMTGTTIYVDG 253
           +   ++AS   +L   G+ ++TG  + VDG
Sbjct: 209 EAP-EVASAAAFLCGPGASFVTGAVLAVDG 237

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 109 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY--PXXXXXXXXX 166
           +  KK++ +N  +  + +K +   +K    G SIVF     G+++     P         
Sbjct: 92  ESIKKVLDLNVWSSIYFIKGLENNLK---VGASIVFN----GSDQCFIAKPNSFAYTLSK 144
Query: 167 XSIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY---------PIAVGQERAVKLVREAA 217
            +I Q  ++ A+++ K++IRVN +  G    D Y          + +  + A K   +  
Sbjct: 145 GAIAQXTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEF 204
Query: 218 PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 253
           PL+R +    ++A  VI+L+SD S++ TG  I +DG
Sbjct: 205 PLNR-IAQPQEIAELVIFLLSDKSKFXTGGLIPIDG 239

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 21/201 (10%)
Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVH--CYTYEGKMQDPLQVGEDEFKKLVKINFV 120
           LD+ +D   A  E V    +  G LD  V        G++    ++ ++++  ++ +N  
Sbjct: 84  LDVRDD--AALRELVADGMEQFGRLDVVVANAGVLSWGRV---WELTDEQWDTVIGVNLT 138
Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEI 180
             W  L+A    M E+  GGSIV ++S  G +    P           +  L  T A+E+
Sbjct: 139 GTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA--TPGNGHYSASKHGLTALTNTLAIEL 196
Query: 181 GKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVK---------NDLAS 231
           G++ IRVN I        E P+   +       R  + +H +  +          +++A 
Sbjct: 197 GEYGIRVNSIHP---YSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADEVAD 253
Query: 232 TVIYLISDGSRYMTGTTIYVD 252
            V +L  DGS  +TGT I VD
Sbjct: 254 VVAWLAGDGSGTLTGTQIPVD 274

>pdb|2O2S|A Chain A, The Structure Of T. Gondii Enoyl Acyl Carrier Protein Reductase In Complex With Nad And Triclosan Length = 315

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 111/273 (40%), Gaps = 51/273 (18%)
Query: 21  IAFHLAKRGCRLVLVGNERRLSSVAEKMMGS--------LKGGQPVEVVG-------LDM 65
           IA HLA  G R+ L G    +  + +K + S        L  G  +E  G        D 
Sbjct: 27  IAKHLASAGARVAL-GTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDK 85
Query: 66  EED---------REGAFD-----EAVDKACQILGNLDAFVHCYTYEGKMQDPL----QVG 107
            ED         R    D     E   K  Q LGN+D  VH      ++  PL    + G
Sbjct: 86  PEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKG 145
Query: 108 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXX 167
                     +FV+   LL+  G  M E   GGS V L S + AER +            
Sbjct: 146 YLAASSNSAYSFVS---LLQHFGPIMNE---GGSAVTL-SYLAAERVVPGYGGGMSSAKA 198
Query: 168 SIHQLVRTAAMEIG-KHKIRVNGIARGLHLQDEYPIAVGQ-------ERAVKLVREAAPL 219
           ++    RT A E G K+ +RVN I+ G  L+     A+G+       + A+      APL
Sbjct: 199 ALESDTRTLAWEAGQKYGVRVNAISAG-PLKSRAASAIGKSGEKSFIDYAIDYSYNNAPL 257
Query: 220 HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 252
            R L   +D+    ++L+S  +R ++G T+YVD
Sbjct: 258 RRDLH-SDDVGGAALFLLSPLARAVSGVTLYVD 289

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 114/262 (43%), Gaps = 15/262 (5%)
Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEV 60
           M  + K  L+T  G    + +A   AK G ++V+V  ++   + AE++ G +  G     
Sbjct: 5   MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDK---AGAERVAGEI--GDAALA 59
Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFV 120
           V  D+   +E   D AV+ A    G +D  V+      K Q+   V  +EF ++V +N  
Sbjct: 60  VAADIS--KEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVR 117
Query: 121 APWFLLKAVGRRMKESKAGGS--IVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAM 178
             + +   +    KE+ A G   ++   +  GA R   P           +  + +  A+
Sbjct: 118 GVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR-PRPNLAWYNATKGWVVSVTKALAI 176
Query: 179 EIGKHKIRV---NGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY 235
           E+   KIRV   N +A    L   + +    E   K  R++ P+ R L   +DLA    +
Sbjct: 177 ELAPAKIRVVALNPVAGETPLLTTF-MGEDSEEIRKKFRDSIPMGRLLK-PDDLAEAAAF 234
Query: 236 LISDGSRYMTGTTIYVDGAQSI 257
           L S  +  +TG  + VDG +SI
Sbjct: 235 LCSPQASMITGVALDVDGGRSI 256

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 104/238 (43%), Gaps = 18/238 (7%)
Query: 21  IAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA 80
           IA    + G ++++ G   R S V EK   S+  G P ++     +   E  + +  D  
Sbjct: 22  IATKFVEEGAKVMITG---RHSDVGEKAAKSV--GTPDQIQFFQHDSSDEDGWTKLFDAT 76
Query: 81  CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGG 140
            +  G +   V+        +   +    E++KL+ +N    +F  +   +RMK    G 
Sbjct: 77  EKAFGPVSTLVNNAGI-AVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGA 135
Query: 141 SIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAME--IGKHKIRVNGIARG---LH 195
           SI+ ++SI G      P          ++  + ++AA++  +  + +RVN +  G     
Sbjct: 136 SIINMSSIEGFVGD--PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTP 193
Query: 196 LQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 253
           L D+ P   G E A+   R   P+   +   ND+A   +YL S+ S++ TG+   VDG
Sbjct: 194 LVDDLP---GAEEAMSQ-RTKTPMGH-IGEPNDIAYICVYLASNESKFATGSEFVVDG 246

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 20/255 (7%)
Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLV-----GNERRLSSVAEKMMGSLKGGQPV 58
           + K VL+T     I + ++   AK G  + +      G+        EK        + V
Sbjct: 46  KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEK--------EGV 97
Query: 59  EVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKIN 118
           + V L  +   E    + V +  + LG+L+  V+    +   Q    +  ++ +K  +IN
Sbjct: 98  KCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRIN 157
Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAM 178
             + + + KA    +K+    G ++  T+ I A  G             +I    R+ + 
Sbjct: 158 IFSYFHVTKAALSHLKQ----GDVIINTASIVAYEG-NETLIDYSATKGAIVAFTRSLSQ 212
Query: 179 EIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 238
            + +  IRVNG+A G       P +   E+ V       P+ R      +LA   +YL S
Sbjct: 213 SLVQKGIRVNGVAPGPIWTPLIPSSF-DEKKVSQFGSNVPMQRP-GQPYELAPAYVYLAS 270
Query: 239 DGSRYMTGTTIYVDG 253
             S Y+TG  I+V+G
Sbjct: 271 SDSSYVTGQMIHVNG 285

>pdb|4EIT|A Chain A, Crystal Structure Of An Enoyl-(Acyl Carrier Protein) Reductase From Bartonella Henselae Length = 276

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 28/252 (11%)
Query: 18  SKNIAFHLAKR----GCRLVLV----GNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDR 69
           +++IA+ +AK     G  L         ++R+  +AE++ G + G   V           
Sbjct: 25  NRSIAWGIAKTASSAGAELAFTYQGEAXKKRVEPLAEEVKGFVCGHCDVS---------D 75
Query: 70  EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDP---LQVGEDEFKKLVKINFVAPWFLL 126
             + D   +   +  G LD  VH   +  K +     + + E  F     I+  +   L 
Sbjct: 76  SASIDAVFNTIEKKWGKLDFLVHAIGFSDKEELSGRYVDISESNFXXTXNISVYSLTALT 135
Query: 127 KAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKIR 186
           K   R  K    GGSI+ LT   GAE+ + P          ++   V+  A+++G   IR
Sbjct: 136 K---RAEKLXSDGGSILTLT-YYGAEK-VVPNYNVXGVAKAALEASVKYLAVDLGPKHIR 190
Query: 187 VNGIARGLHLQDEYPIAVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMT 245
           VN I+ G  ++      +G  R + K     APL R + ++ ++  + +YL+SD SR +T
Sbjct: 191 VNAISAG-PIKTLAASGIGDFRYILKWNEYNAPLRRTVTIE-EVGDSALYLLSDLSRSVT 248
Query: 246 GTTIYVDGAQSI 257
           G   +VD   +I
Sbjct: 249 GEVHHVDSGYNI 260

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 107/262 (40%), Gaps = 21/262 (8%)
Query: 1   MENQ------AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKG 54
           M NQ       +  L+T     + + +A  LA  G R+++ G +   S VA+ +      
Sbjct: 16  MSNQIIFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDP--SRVAQTVQEFRNV 73
Query: 55  GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL-QVGEDEFKK 113
           G   E V  D+  + E    EA  +  +   ++D  V+    +   + P+ ++   ++++
Sbjct: 74  GHDAEAVAFDVTSESE--IIEAFARLDEQGIDVDILVNNAGIQ--FRKPMIELETADWQR 129
Query: 114 LVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG--AERGLYPXXXXXXXXXXSIHQ 171
           ++  N  + + + +   +RM   +  G IV + S+    A   + P           I  
Sbjct: 130 VIDTNLTSAFMIGREAAKRMI-PRGYGKIVNIGSLTSELARATVAPYTVAKG----GIKM 184
Query: 172 LVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAS 231
           L R  A E  ++ I+ N I  G  L D     +        V+   P  RW     +L  
Sbjct: 185 LTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRW-GKPQELVG 243
Query: 232 TVIYLISDGSRYMTGTTIYVDG 253
           T ++L +  S Y+ G  IYVDG
Sbjct: 244 TAVFLSASASDYVNGQIIYVDG 265

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 108/263 (41%), Gaps = 29/263 (11%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K  L+T  G  I K IA  L K G  + +   N+    +VA ++  +  GG  V  V +D
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEI--NQAGGHAV-AVKVD 59
Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQ-VGEDEFKKLVKINFVAPW 123
           +  DR+  F  AV++A + LG  D  V+          P++ +  +   K+  IN     
Sbjct: 60  VS-DRDQVF-AAVEQARKTLGGFDVIVNNAGV--APSTPIESITPEIVDKVYNINVKGVI 115
Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKH 183
           + ++A     K+   GG I+   S  G      P          ++  L +TAA ++   
Sbjct: 116 WGIQAAVEAFKKEGHGGKIINACSQAGHVGN--PELAVYSSSKFAVRGLTQTAARDLAPL 173
Query: 184 KIRVNGIARGLHLQDEY-------------PIAVGQERAVKLVREAAPLHRWLDVKNDLA 230
            I VNG   G+     +             P+  G     K +     L R L    D+A
Sbjct: 174 GITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRIT----LGR-LSEPEDVA 228
Query: 231 STVIYLISDGSRYMTGTTIYVDG 253
           + V YL S  S YMTG ++ +DG
Sbjct: 229 ACVSYLASPDSDYMTGQSLLIDG 251

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 24/198 (12%)
Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYE--GKMQDPLQVGEDEFKKLVKIN 118
           V LD+ +  +  +  AVD A    G L   V+       G ++D       E+++++ +N
Sbjct: 58  VHLDVTQPAQ--WKAAVDTAVTAFGGLHVLVNNAGILNIGTIED---YALTEWQRILDVN 112
Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAM 178
               +  ++AV +  KE+  G SI+ ++SI G    +            ++  L ++ A+
Sbjct: 113 LTGVFLGIRAVVKPXKEAGRG-SIINISSIEGLAGTV--ACHGYTATKFAVRGLTKSTAL 169
Query: 179 EIGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY 235
           E+G   IRVN I  GL      D  P  + Q     L R A P+        ++++ V+Y
Sbjct: 170 ELGPSGIRVNSIHPGLVKTPXTDWVPEDIFQ---TALGRAAEPV--------EVSNLVVY 218
Query: 236 LISDGSRYMTGTTIYVDG 253
           L SD S Y TG    VDG
Sbjct: 219 LASDESSYSTGAEFVVDG 236

>pdb|2O50|A Chain A, The Crystal Structure Of Toxoplasma Gondii Enoyl Acyl Carrier Protein Reductase Length = 315

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 111/273 (40%), Gaps = 51/273 (18%)
Query: 21  IAFHLAKRGCRLVLVGNERRLSSVAEKMMGS--------LKGGQPVEVVG-------LDM 65
           IA HLA  G R+ L G    +  + +K + S        L  G  +E  G        D 
Sbjct: 27  IAKHLASAGARVAL-GTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDK 85
Query: 66  EED---------REGAFD-----EAVDKACQILGNLDAFVHCYTYEGKMQDPL----QVG 107
            ED         R    D     E   K  Q LGN+D  VH      ++  PL    + G
Sbjct: 86  PEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKG 145
Query: 108 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXX 167
                     +FV+   LL+  G    E   GGS V L S + AER +            
Sbjct: 146 YLAASSNSAYSFVS---LLQHFGPIXNE---GGSAVTL-SYLAAERVVPGYGGGXSSAKA 198
Query: 168 SIHQLVRTAAMEIG-KHKIRVNGIARGLHLQDEYPIAVGQ-------ERAVKLVREAAPL 219
           ++    RT A E G K+ +RVN I+ G  L+     A+G+       + A+      APL
Sbjct: 199 ALESDTRTLAWEAGQKYGVRVNAISAG-PLKSRAASAIGKSGEKSFIDYAIDYSYNNAPL 257
Query: 220 HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 252
            R L   +D+    ++L+S  +R ++G T+YVD
Sbjct: 258 RRDLH-SDDVGGAALFLLSPLARAVSGVTLYVD 289

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 108 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXX 167
           E ++  ++  NF A + L +     +K S+  G+++FL+SI G      P          
Sbjct: 120 EKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSA--LPSVSLYSASKG 176
Query: 168 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKLVREAAPLHRWL 223
           +I+Q+ ++ A E  K  IRVN +A G+ L      A+     Q+  +       P+ R  
Sbjct: 177 AINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGR-A 235
Query: 224 DVKNDLASTVIYLISDGSRYMTGTTIYVDG 253
               ++++ + +L    + Y+TG  I+ DG
Sbjct: 236 GKPQEVSALIAFLCFPAASYITGQIIWADG 265

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 109/259 (42%), Gaps = 26/259 (10%)
Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEV 60
           M  + K  L+T     I K IA  LA+RG +++        +      +G    G  + V
Sbjct: 8   MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNV 67
Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKIN 118
                 E  E       D+     G +D  V+     G  +D L  ++ E+E+  +++ N
Sbjct: 68  TN---PESIEAVLKAITDE----FGGVDILVNN---AGITRDNLLMRMKEEEWSDIMETN 117
Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG----AERGLYPXXXXXXXXXXSIHQLVR 174
             + + L KAV R M + + G  I+ + S++G    A +  Y            +    +
Sbjct: 118 LTSIFRLSKAVLRGMMKKRQG-RIINVGSVVGTMGNAGQANYAAAKA------GVIGFTK 170
Query: 175 TAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI 234
           + A E+    + VN +A G    D       ++R   L +   P  R  D + ++AS V 
Sbjct: 171 SMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQ--VPAGRLGDPR-EIASAVA 227
Query: 235 YLISDGSRYMTGTTIYVDG 253
           +L S  + Y+TG T++V+G
Sbjct: 228 FLASPEAAYITGETLHVNG 246

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 103/238 (43%), Gaps = 18/238 (7%)
Query: 21  IAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA 80
           IA    + G ++++     R S V EK   S+  G P ++     +   E  + +  D  
Sbjct: 22  IATKFVEEGAKVMIT---DRHSDVGEKAAKSV--GTPDQIQFFQHDSSDEDGWTKLFDAT 76
Query: 81  CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGG 140
            +  G +   V+        +   +    E++KL+ +N    +F  +   +RMK    G 
Sbjct: 77  EKAFGPVSTLVNNAGI-AVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGA 135
Query: 141 SIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAME--IGKHKIRVNGIARG---LH 195
           SI+ ++SI G      P          ++  + ++AA++  +  + +RVN +  G     
Sbjct: 136 SIINMSSIEGFVGD--PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTP 193
Query: 196 LQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 253
           L D+ P   G E A+   R   P+   +   ND+A   +YL S+ S++ TG+   VDG
Sbjct: 194 LVDDLP---GAEEAMSQ-RTKTPMGH-IGEPNDIAYICVYLASNESKFATGSEFVVDG 246

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 18/255 (7%)
Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEV 60
           M  + K  L+T     I K IA  LA+RG +++        +      +G    G  + V
Sbjct: 8   MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNV 67
Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKIN 118
                 E  E       D+     G +D  V+     G  +D L  ++ E+E+  +++ N
Sbjct: 68  TN---PESIEAVLKAITDE----FGGVDILVNNA---GITRDNLLMRMKEEEWSDIMETN 117
Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAM 178
             + + L KAV R M + + G  I+ + S++G                  +    ++ A 
Sbjct: 118 LTSIFRLSKAVLRGMMKKRQG-RIINVGSVVGTMG--NAGQANFAAAKAGVIGFTKSMAR 174
Query: 179 EIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 238
           E+    + VN +A G    D       ++R   L +   P  R  D + ++AS V +L S
Sbjct: 175 EVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQ--VPAGRLGDPR-EIASAVAFLAS 231
Query: 239 DGSRYMTGTTIYVDG 253
             + Y+TG T++V+G
Sbjct: 232 PEAAYITGETLHVNG 246

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 107/263 (40%), Gaps = 36/263 (13%)
Query: 9   LLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEE 67
           ++T  G  I +  A   AK G  +V+   NE     VA ++ GS   G  V+V      +
Sbjct: 31  IVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-GSKAFGVRVDV---SSAK 86
Query: 68  DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLK 127
           D E      V+K     G +D  V+   + G   + + + E+ + ++  +N V   FL  
Sbjct: 87  DAE----SXVEKTTAKWGRVDVLVNNAGF-GTTGNVVTIPEETWDRIXSVN-VKGIFLCS 140
Query: 128 AVGRRMKESKAGGSIVFLTSIIG----AERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKH 183
                +     GGSI+  TS       A+R  Y           +I  L R  A +  K 
Sbjct: 141 KYVIPVXRRNGGGSIINTTSYTATSAIADRTAY------VASKGAISSLTRAXAXDHAKE 194
Query: 184 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVK---------NDLASTVI 234
            IRVN +A G  +   Y   +  E      ++ A L    + +          ++A   +
Sbjct: 195 GIRVNAVAPGT-IDSPYFTKIFAE-----AKDPAKLRSDFNARAVXDRXGTAEEIAEAXL 248
Query: 235 YLISDGSRYMTGTTIYVDGAQSI 257
           +L SD SR+ TG+ + VDG  SI
Sbjct: 249 FLASDRSRFATGSILTVDGGSSI 271

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 11/188 (5%)
Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 125
           E+ RE     A+D+     G +   V+     G    P  +   +F+   K+N  + + L
Sbjct: 73  EQHREAVIKAALDQ----FGKITVLVN--NAGGGGPKPFDMPMSDFEWAFKLNLFSLFRL 126
Query: 126 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKI 185
            +     M+++  GG+I+ ++S+ G    +            +++ L R  A ++G   I
Sbjct: 127 SQLAAPHMQKA-GGGAILNISSMAGENTNV--RMASYGSSKAAVNHLTRNIAFDVGPMGI 183
Query: 186 RVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMT 245
           RVN IA G    D     +  E    +++   PL R L    D+A+  ++L S  + +++
Sbjct: 184 RVNAIAPGAIKTDALATVLTPEIERAMLKH-TPLGR-LGEAQDIANAALFLCSPAAAWIS 241
Query: 246 GTTIYVDG 253
           G  + V G
Sbjct: 242 GQVLTVSG 249

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 116/255 (45%), Gaps = 20/255 (7%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           ++ L+T     + + IA  L  +G  + L G  E +L  +A ++      G+ + V   +
Sbjct: 11  RKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAEL------GERIFVFPAN 64
Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAP 122
           +  DRE A      KA + +G +D  V+     G  +D L  ++ ++++  ++ +N  + 
Sbjct: 65  LS-DRE-AVKALGQKAEEEMGGVDILVN---NAGITRDGLFVRMSDEDWDAVLTVNLTSV 119
Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGK 182
           + L + +   M   +  G I+ +TSI+G      P           +    ++ A EI  
Sbjct: 120 FNLTRELTHPMMRRR-NGRIINITSIVGVTG--NPGQANYCASKAGLIGFSKSLAQEIAS 176
Query: 183 HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 242
             + VN IA G    +        E+    +    P+ R + V  D+A+ V+YL SD + 
Sbjct: 177 RNVTVNCIAPGF--IESAMTGKLNEKQKDAIMGNIPMKR-MGVGADIAAAVVYLASDEAA 233
Query: 243 YMTGTTIYVDGAQSI 257
           Y+TG T++V+G  ++
Sbjct: 234 YVTGQTLHVNGGMAM 248

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 102/250 (40%), Gaps = 10/250 (4%)
Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
           + K VL+T     I + ++   AK G  + +   +    +   K     +G   V+ V L
Sbjct: 46  KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG---VKCVLL 102
Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
             +   E    + V +  + LG+L+  V+    +   Q    +  ++ +K  +IN  + +
Sbjct: 103 PGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYF 162
Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKH 183
            + KA    +K+    G ++  T+ I A  G             +I    R+ +  + + 
Sbjct: 163 HVTKAALSHLKQ----GDVIINTASIVAYEG-NETLIDYSATKGAIVAFTRSLSQSLVQK 217
Query: 184 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
            IRVNG+A G       P +   E+ V       P  R      +LA   +YL S  S Y
Sbjct: 218 GIRVNGVAPGPIWTPLIPSSF-DEKKVSQFGSNVPXQR-PGQPYELAPAYVYLASSDSSY 275
Query: 244 MTGTTIYVDG 253
           +TG  I+V+G
Sbjct: 276 VTGQXIHVNG 285

>pdb|1ULU|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 98/242 (40%), Gaps = 18/242 (7%)
Query: 21  IAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA 80
           IA  L + G  + L     RL   AEK+  +L G     +   D+ +D E   D      
Sbjct: 26  IAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGAL---LFRADVTQDEE--LDALFAGV 80
Query: 81  CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFV----APWFLLKAVGRRMKES 136
            +  G LD  VH   +      P +  E  +    + +++       + L AV RR +  
Sbjct: 81  KEAFGGLDYLVHAIAFA-----PREAXEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPL 135
Query: 137 -KAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKIRVNGIARGLH 195
            + GG IV LT    A   + P          ++   VR  A E+G   +RVN I+ G  
Sbjct: 136 LREGGGIVTLTYY--ASEKVVPKYNVXAIAKAALEASVRYLAYELGPKGVRVNAISAGPV 193
Query: 196 LQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 255
                    G  +    V + APL R +  + ++ +  ++L+S  +  +TG  +YVD   
Sbjct: 194 RTVAARSIPGFTKXYDRVAQTAPLRRNI-TQEEVGNLGLFLLSPLASGITGEVVYVDAGY 252
Query: 256 SI 257
            I
Sbjct: 253 HI 254

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 116/255 (45%), Gaps = 20/255 (7%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           ++ L+T     + + IA  L  +G  + L G  E +L  +A ++      G+ + V   +
Sbjct: 8   RKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAEL------GERIFVFPAN 61
Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAP 122
           +  DRE A      KA + +G +D  V+     G  +D L  ++ ++++  ++ +N  + 
Sbjct: 62  LS-DRE-AVKALGQKAEEEMGGVDILVN---NAGITRDGLFVRMSDEDWDAVLTVNLTSV 116
Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGK 182
           + L + +   M   +  G I+ +TSI+G      P           +    ++ A EI  
Sbjct: 117 FNLTRELTHPMMRRR-NGRIINITSIVGVTGN--PGQANYCASKAGLIGFSKSLAQEIAS 173
Query: 183 HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 242
             + VN IA G    +        E+    +    P+ R + V  D+A+ V+YL SD + 
Sbjct: 174 RNVTVNCIAPGF--IESAMTGKLNEKQKDAIMGNIPMKR-MGVGADIAAAVVYLASDEAA 230
Query: 243 YMTGTTIYVDGAQSI 257
           Y+TG T++V+G  ++
Sbjct: 231 YVTGQTLHVNGGMAM 245

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 106/257 (41%), Gaps = 17/257 (6%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           KR L+T     I  +IA   A  G RLVL G +      A + +G  + G  V  V +D+
Sbjct: 21  KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGE-QFGTDVHTVAIDL 79
Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDE---FKKLVKINFVAP 122
            E    A  E   +A +  G LD  V+       +  P  V + +   F   + +N  AP
Sbjct: 80  AE--PDAPAELARRAAEAFGGLDVLVN----NAGISHPQPVVDTDPQLFDATIAVNLRAP 133
Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL--YPXXXXXXXXXXSIHQLVRTAAMEI 180
             L  AVG+ M  +  GG+I+ + S          Y           +   L R    E+
Sbjct: 134 ALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLAR----EL 189
Query: 181 GKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG 240
           G H IR N +   + L +      G E     +    PL R+  V ++++  V++L SD 
Sbjct: 190 GPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFA-VPHEVSDAVVWLASDA 248
Query: 241 SRYMTGTTIYVDGAQSI 257
           +  + G  I VDG  ++
Sbjct: 249 ASMINGVDIPVDGGYTM 265

>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 112/263 (42%), Gaps = 23/263 (8%)
Query: 4   QAKRVLLTSDGDE--ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVV 61
           + KR L+T   +E  I+  IA    + G +L       +L    EK +  +  G      
Sbjct: 20  EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKL----EKRVREIAKG-----F 70
Query: 62  GLDMEEDREGAFDEAVDKACQIL----GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKI 117
           G D+    + + DE +    + L    G+LD  VH   Y  K +    V  D  ++  KI
Sbjct: 71  GSDLVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGV-IDTSREGFKI 129
Query: 118 NFVAPWFLLKAVGRRMKESKAG--GSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRT 175
                 + L A+ R +     G  G+IV L S  GAE+ + P          ++   VR 
Sbjct: 130 AMDISVYSLIALTRELLPLMEGRNGAIVTL-SYYGAEK-VVPHYNVMGIAKAALESTVRY 187
Query: 176 AAMEIGKHKIRVNGIARG-LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI 234
            A +I KH  R+N I+ G +     Y I  G    ++   +  P  + + ++ D+  T +
Sbjct: 188 LAYDIAKHGHRINAISAGPVKTLAAYSI-TGFHLLMEHTTKVNPFGKPITIE-DVGDTAV 245
Query: 235 YLISDGSRYMTGTTIYVDGAQSI 257
           +L SD +R +TG  ++VD    I
Sbjct: 246 FLCSDWARAITGEVVHVDNGYHI 268

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 109/259 (42%), Gaps = 26/259 (10%)
Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEV 60
           M  + K  L+T     I K IA  LA+RG +++        +      +G    G  + V
Sbjct: 8   MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNV 67
Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKIN 118
                 E  E       D+     G +D  V+     G  +D L  ++ E+E+  +++ N
Sbjct: 68  TN---PESIEAVLKAITDE----FGGVDILVNN---AGITRDNLLMRMKEEEWSDIMETN 117
Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG----AERGLYPXXXXXXXXXXSIHQLVR 174
             + + L KAV R M + + G  I+ + S++G    A +  Y            +    +
Sbjct: 118 LTSIFRLSKAVLRGMMKKRQG-RIINVGSVVGTMGNAGQANYAAAKA------GVIGFTK 170
Query: 175 TAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI 234
           + A E+    + VN +A G    D       ++R   L +   P  R  D + ++AS V 
Sbjct: 171 SMAREVASRGVTVNTVAPGAIETDMTKALNDEQRTATLAQ--VPAGRLGDPR-EIASAVA 227
Query: 235 YLISDGSRYMTGTTIYVDG 253
           +L S  + Y+TG T++V+G
Sbjct: 228 FLASPEAAYITGETLHVNG 246

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/195 (22%), Positives = 80/195 (41%), Gaps = 11/195 (5%)
Query: 77  VDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKIN----FVAPWFLLKAVGRR 132
           V+ A +  G LD   +     G M +   +  + +++ +  N    F+A  + + A+   
Sbjct: 76  VELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAI--- 132
Query: 133 MKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKIRVNGI-A 191
              +  GGS+ F +S +G   G +            +  LV+  A+E+G   IRVN +  
Sbjct: 133 --AALGGGSLTFTSSFVGHTAG-FAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLP 189
Query: 192 RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 251
            G      +    G     +   E     + +    ++A   +YL SDG+ ++TG  +  
Sbjct: 190 GGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVTGAALLA 249
Query: 252 DGAQSITRPRMRSYM 266
           DG  S+T+     Y 
Sbjct: 250 DGGASVTKAAENLYF 264

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 103/262 (39%), Gaps = 35/262 (13%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           K  ++T  G  I   +A  LA  GC ++    +   +  A   +G   G     V   D+
Sbjct: 30  KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGC--GAAACRV---DV 84
Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 125
            ++++      VD      G +D  V        +   +    ++F +++ IN    W  
Sbjct: 85  SDEQQ--IIAMVDACVAAFGGVDKLVANAGVV-HLASLIDTTVEDFDRVIAINLRGAWLC 141
Query: 126 LKAVGRRMKESKAGGSIVFLTSIIG----AERGLYPXXXXXXXXXXSIHQLVRTAAMEIG 181
            K    RM E + GG+IV L+S+ G       G Y            I QL R  A E+ 
Sbjct: 142 TKHAAPRMIE-RGGGAIVNLSSLAGQVAVGGTGAY------GMSKAGIIQLSRITAAELR 194
Query: 182 KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA----------APLHRWLDVKNDLAS 231
              IR N +   L    + P+   Q+ A+ +   A          A L   +    ++A 
Sbjct: 195 SSGIRSNTL---LPAFVDTPM---QQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAG 248
Query: 232 TVIYLISDGSRYMTGTTIYVDG 253
            V++L+SD +  +TGTT   DG
Sbjct: 249 IVVFLLSDDASMITGTTQIADG 270

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 108/259 (41%), Gaps = 26/259 (10%)
Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEV 60
           M  + K  L+T     I K IA  LA+RG +++        +      +G    G  + V
Sbjct: 8   MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNV 67
Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKIN 118
                 E  E       D+     G +D  V+        +D L  ++ E+E+  +++ N
Sbjct: 68  TN---PESIEAVLKAITDE----FGGVDILVNNAAIT---RDNLLMRMKEEEWSDIMETN 117
Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG----AERGLYPXXXXXXXXXXSIHQLVR 174
             + + L KAV R M + + G  I+ + S++G    A +  Y            +    +
Sbjct: 118 LTSIFRLSKAVLRGMMKKRQG-RIINVGSVVGTMGNAGQANYAAAKA------GVIGFTK 170
Query: 175 TAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI 234
           + A E+    + VN +A G    D       ++R   L +   P  R  D + ++AS V 
Sbjct: 171 SMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQ--VPAGRLGDPR-EIASAVA 227
Query: 235 YLISDGSRYMTGTTIYVDG 253
           +L S  + Y+TG T++V+G
Sbjct: 228 FLASPEAAYITGETLHVNG 246

>pdb|2YW9|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 99/249 (39%), Gaps = 32/249 (12%)
Query: 21  IAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA 80
           IA  L + G  + L     RL   AEK+  +L G         D+ +D E   D      
Sbjct: 26  IAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRA---DVTQDEE--LDALFAGV 80
Query: 81  CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFV----APWFLLKAVGRRMKES 136
            +  G LD  VH   +      P +  E  +    + +++       + L AV RR +  
Sbjct: 81  KEAFGGLDYLVHAIAFA-----PREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPL 135
Query: 137 -KAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKIRVNGIARGLH 195
            + GG IV LT    A   + P          ++   VR  A E+G   +RVN I+ G  
Sbjct: 136 LREGGGIVTLTYY--ASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAG-- 191
Query: 196 LQDEYPIAVGQERAVK-------LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTT 248
                P+     R++         V + APL R +  + ++ +  ++L+S  +  +TG  
Sbjct: 192 -----PVRTVAARSIPGFTKMYDRVAQTAPLRRNI-TQEEVGNLGLFLLSPLASGITGEV 245
Query: 249 IYVDGAQSI 257
           +YVD    I
Sbjct: 246 VYVDAGYHI 254

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 110 EFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSI 169
           +F++++ I+  AP+ + KAV   M + K  G I+ + S++ +E G              +
Sbjct: 134 QFRQVIDIDLNAPFIVSKAVIPSMIK-KGHGKIINICSMM-SELG-RETVSAYAAAKGGL 190
Query: 170 HQLVRTAAMEIGKHKIRVNGIARG-LHLQDEYPIAVGQERAVK-----LVREAAPLHRWL 223
             L +  A E G+  I+ NGI  G +      P+   Q+   +      +    P  RW 
Sbjct: 191 KMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQKDGSRHPFDQFIIAKTPAARWG 250
Query: 224 DVKNDLASTVIYLISDGSRYMTGTTIYVDG 253
           + + DL    ++L SD S ++ G  +YVDG
Sbjct: 251 EAE-DLMGPAVFLASDASNFVNGHILYVDG 279

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 109/275 (39%), Gaps = 36/275 (13%)
Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVL--VGNERRLSSVAEKMMGSLKGGQPV 58
           M    K  L+T     I +  A    + G R+ +  +  E   ++ AE        G   
Sbjct: 1   MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-------GPAA 53
Query: 59  EVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKIN 118
             + LD+ +  + + D  V +     G++D  V+       +   +++  + + +L  IN
Sbjct: 54  CAIALDVTD--QASIDRCVAELLDRWGSIDILVNNAALF-DLAPIVEITRESYDRLFAIN 110
Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG----AERGLYPXXXXXXXXXXSIHQLVR 174
                F+++AV R M     GG I+ + S  G    A  G+Y           ++  L +
Sbjct: 111 VSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVY------CATKAAVISLTQ 164
Query: 175 TAAMEIGKHKIRVNGIARGL-----------HLQDEYPIAVGQERAVKLVREAAPLHRWL 223
           +A + + +H I VN IA G+              D   +  G+++  + V  A P  R +
Sbjct: 165 SAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKK--RQVGAAVPFGR-M 221
Query: 224 DVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 258
               DL    I+L +  + Y+   T  VDG   ++
Sbjct: 222 GRAEDLTGMAIFLATPEADYIVAQTYNVDGGNWMS 256

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 108/259 (41%), Gaps = 26/259 (10%)
Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEV 60
           M  + K  L+T     I K IA  LA+RG +++        +      +G    G  + V
Sbjct: 8   MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNV 67
Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKIN 118
                 E  E       D+     G +D  V+        +D L  ++ E+E+  +++ N
Sbjct: 68  TN---PESIEAVLKAITDE----FGGVDILVNNADI---TRDNLLMRMKEEEWSDIMETN 117
Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG----AERGLYPXXXXXXXXXXSIHQLVR 174
             + + L KAV R M + + G  I+ + S++G    A +  Y            +    +
Sbjct: 118 LTSIFRLSKAVLRGMMKKRQG-RIINVGSVVGTMGNAGQANYAAAKA------GVIGFTK 170
Query: 175 TAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI 234
           + A E+    + VN +A G    D       ++R   L +   P  R  D + ++AS V 
Sbjct: 171 SMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQ--VPAGRLGDPR-EIASAVA 227
Query: 235 YLISDGSRYMTGTTIYVDG 253
           +L S  + Y+TG T++V+G
Sbjct: 228 FLASPEAAYITGETLHVNG 246

>pdb|3GRK|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Reductase Sdr Glucose-Ribitol Dehydrogenase From Brucella Melitensis Length = 293

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 13/173 (7%)
Query: 85  GNLDAFVHCYTYEGKMQDP---LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA-GG 140
           G LD  VH   +  K +     +   E  F   + I+     + L AV RR ++  A GG
Sbjct: 108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISV----YSLTAVSRRAEKLMADGG 163
Query: 141 SIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY 200
           SI+ LT   GAE+ + P          ++   V+  A+++G   IRVN I+ G  ++   
Sbjct: 164 SILTLT-YYGAEK-VMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAG-PIKTLA 220
Query: 201 PIAVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 252
              +G  R + K     APL R + + +++    +Y +SD SR +TG   + D
Sbjct: 221 ASGIGDFRYILKWNEYNAPLRRTVTI-DEVGDVGLYFLSDLSRSVTGEVHHAD 272

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 105 QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTS--IIGAERGLYPXXXXX 162
           ++  ++FK+ +   F+    +++     MKE K  G IV +TS  +I     LY      
Sbjct: 99  ELTNEDFKEAIDSLFLNMIKIVRNYLPAMKE-KGWGRIVAITSFSVISPIENLY----TS 153
Query: 163 XXXXXSIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRW 222
                ++   ++T + E+  + I VN +A G    +     + +E+  K V    P+ R 
Sbjct: 154 NSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKK-KQVESQIPMRR- 211
Query: 223 LDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 256
           +    ++AS V +L S+ + Y+TG TI VDG  S
Sbjct: 212 MAKPEEIASVVAFLCSEKASYLTGQTIVVDGGLS 245

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 101/252 (40%), Gaps = 18/252 (7%)
Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
           + K  L+T     I K IA  LA+RG +++        +      +G    G  + V   
Sbjct: 8   EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGXALNVTN- 66
Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVA 121
              E  E       D+     G +D  V+     G  +D L  +  E+E+  + + N  +
Sbjct: 67  --PESIEAVLKAITDE----FGGVDILVNNA---GITRDNLLXRXKEEEWSDIXETNLTS 117
Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIG 181
            + L KAV  R    K  G I+ + S++G                  +    ++ A E+ 
Sbjct: 118 IFRLSKAV-LRGXXKKRQGRIINVGSVVGTXG--NAGQANYAAAKAGVIGFTKSXAREVA 174
Query: 182 KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 241
              + VN +A G    D       ++R   L +   P  R  D + ++AS V +L S  +
Sbjct: 175 SRGVTVNTVAPGFIETDXTKALNDEQRTATLAQ--VPAGRLGDPR-EIASAVAFLASPEA 231
Query: 242 RYMTGTTIYVDG 253
            Y+TG T++V+G
Sbjct: 232 AYITGETLHVNG 243

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/265 (21%), Positives = 114/265 (43%), Gaps = 29/265 (10%)
Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK--GGQPVEVV 61
           + K V++T     + K++A   A    ++V+  N R     A  ++  +K  GG+ + V 
Sbjct: 6   EGKVVVITGSSTGLGKSMAIRFATEKAKVVV--NYRSKEDEANSVLEEIKKVGGEAIAVK 63
Query: 62  G-LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGE---DEFKKLVKI 117
           G + +E D        V  A +  G LD  ++       +++P+   E    ++ K++  
Sbjct: 64  GDVTVESD----VINLVQSAIKEFGKLDVMIN----NAGLENPVSSHEMSLSDWNKVIDT 115
Query: 118 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAA 177
           N    +   +   +   E+   G+++ ++S+   E+  +P           +  + +T A
Sbjct: 116 NLTGAFLGSREAIKYFVENDIKGTVINMSSV--HEKIPWPLFVHYAASKGGMKLMTKTLA 173
Query: 178 MEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKNDLAST 232
           +E     IRVN I  G       PI     A  ++RA   V    P+  ++    ++A+ 
Sbjct: 174 LEYAPKGIRVNNIGPG---AINTPINAEKFADPEQRAD--VESMIPMG-YIGEPEEIAAV 227
Query: 233 VIYLISDGSRYMTGTTIYVDGAQSI 257
             +L S  + Y+TG T++ DG  ++
Sbjct: 228 AAWLASSEASYVTGITLFADGGMTL 252

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 113/256 (44%), Gaps = 21/256 (8%)
Query: 8   VLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK--GGQPVEVVG-LD 64
           V++T     I K IA  L K GC++++  N  R +  AE++   ++  GGQ +   G + 
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLV--NYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61
Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAP 122
            E D E     A+D      G +D  V+     G  +D L  ++ + ++ +++ +N    
Sbjct: 62  KEADVEAMMKTAIDA----WGTIDVVVN---NAGITRDTLLIRMKKSQWDEVIDLNLTGV 114
Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGK 182
           +   +A  + M + + G  I+ + S++G    +             +    +TAA E   
Sbjct: 115 FLCTQAATKIMMKKRKG-RIINIASVVGLIGNI--GQANYAAAKAGVIGFSKTAAREGAS 171
Query: 183 HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL-ISDGS 241
             I VN +  G    D     +G++   K++    PL R    +N +A  V +L +S  +
Sbjct: 172 RNINVNVVCPGFIASD-MTAKLGEDMEKKILGTI-PLGRTGQPEN-VAGLVEFLALSPAA 228
Query: 242 RYMTGTTIYVDGAQSI 257
            Y+TG    +DG  +I
Sbjct: 229 SYITGQAFTIDGGIAI 244

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 104/258 (40%), Gaps = 18/258 (6%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           K V++T       K  A   AK G R+V+ G  +     A+  +       P +++ +  
Sbjct: 7   KVVIITGGSSGXGKGXATRFAKEGARVVITGRTKEKLEEAKLEIEQF----PGQILTVQX 62
Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQ-VGEDEFKKLVKINFVAPWF 124
           +        + +++  +  G +D  ++     G    P + +  + +  ++ I     ++
Sbjct: 63  DVRNTDDIQKXIEQIDEKFGRIDILIN--NAAGNFICPAEDLSVNGWNSVINIVLNGTFY 120
Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIG-KH 183
             +A+G+   E    G+I+   +    + G  P           +    +T A+E G K+
Sbjct: 121 CSQAIGKYWIEKGIKGNIINXVATYAWDAG--PGVIHSAAAKAGVLAXTKTLAVEWGRKY 178
Query: 184 KIRVNGIARG----LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD 239
            IRVN IA G        D+  I+   E   K   ++ PL R L    ++A    YL SD
Sbjct: 179 GIRVNAIAPGPIERTGGADKLWIS---EEXAKRTIQSVPLGR-LGTPEEIAGLAYYLCSD 234
Query: 240 GSRYMTGTTIYVDGAQSI 257
            + Y+ GT    DG Q +
Sbjct: 235 EAAYINGTCXTXDGGQHL 252

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 37/205 (18%)
Query: 68  DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLK 127
           DRE +   A+      LG LD  V           P+  G+D +  ++ +N    +  +K
Sbjct: 85  DRE-SLSAALQAGLDELGRLDIVVANAGIA-----PMSAGDDGWHDVIDVNLTGVYHTIK 138
Query: 128 AVGRRMKESKAGGSIVFLTSIIG-AERGLY-PXXXXXXXXXXSIHQLVRTAAMEIGKHKI 185
                + +   GGSIV ++S  G A  G   P           +  L+R  A  +    I
Sbjct: 139 VAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMI 198
Query: 186 RVNGI-ARGLH---LQDEY--------------PIAVGQERAVKLVREAAPLHRWLDVKN 227
           RVN I   G+    + +E+              P A+G    V+++   AP         
Sbjct: 199 RVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPVEVL---AP--------E 247
Query: 228 DLASTVIYLISDGSRYMTGTTIYVD 252
           D+A+ V +L+SD +RY+TG T+ VD
Sbjct: 248 DVANAVAWLVSDQARYITGVTLPVD 272

>pdb|3K2E|A Chain A, Crystal Structure Of Enoyl-(Acyl-Carrier-Protein) Reductase From Anaplasma Phagocytophilum At 1.9a Resolution Length = 296

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 34/260 (13%)
Query: 19  KNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPV-EVVGLDMEEDREGAFDEAV 77
           K++A+ +AK  C     G E  L+ ++E      K   P+ E +G+ +    + +  E+V
Sbjct: 42  KSLAWGIAKAVCAQ---GAEVALTYLSETFK---KRVDPLAESLGVKLTVPCDVSDAESV 95
Query: 78  DKACQIL----GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 133
           D   ++L    G+LD  VH   +  K +   +  +      +    ++ +       +  
Sbjct: 96  DNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAE 155
Query: 134 KESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKIRVNGIARG 193
                GGSI+ L S  GAE+ + P          ++   V+  A+++GK +IRVN I+ G
Sbjct: 156 PLMTNGGSILTL-SYYGAEK-VVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAG 213
Query: 194 LHLQDEYPIAVGQERAVK-------LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
                  P+       +          +  +PL R   + +D+    +YL+SD  R  TG
Sbjct: 214 -------PVRTLASSGISDFHYILTWNKYNSPLRRNTTL-DDVGGAALYLLSDLGRGTTG 265
Query: 247 TTIYVD------GAQSITRP 260
            T++VD      G +S+  P
Sbjct: 266 ETVHVDCGYHVVGMKSVDAP 285

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 102/253 (40%), Gaps = 14/253 (5%)
Query: 9   LLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK-GGQPVEVVGLDMEE 67
           ++T     I       LA+ G R+++   +    ++A K +  L+  G  V  V +D+  
Sbjct: 17  IVTGGAQNIGLACVTALAEAGARVIIADLDE---AMATKAVEDLRMEGHDVSSVVMDVTN 73
Query: 68  DREGAFDEAVDKACQILGNLDAFVHC---YTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
               +   AV    +  G +D  V C      E K +D   + + ++ K V IN    + 
Sbjct: 74  TE--SVQNAVRSVHEQEGRVDILVACAGICISEVKAED---MTDGQWLKQVDINLNGMFR 128
Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHK 184
             +AVGR M E K G  IV + S+ G                  +HQ +R+ A E   H 
Sbjct: 129 SCQAVGRIMLEQKQG-VIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHG 187
Query: 185 IRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
           IR N +A            + +           P+ R +   +++AS V +L SD +  M
Sbjct: 188 IRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGR-VGQPDEVASVVQFLASDAASLM 246
Query: 245 TGTTIYVDGAQSI 257
           TG  + VD   ++
Sbjct: 247 TGAIVNVDAGFTV 259

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 19/197 (9%)
Query: 69  REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKA 128
           R+ + D A+    +  G LD  V+       +   +++  + ++KL  IN     F L+A
Sbjct: 65  RQDSIDAAIAATVEHAGGLDILVNNAALF-DLAPIVEITRESYEKLFAINVAGTLFTLQA 123
Query: 129 VGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKIRVN 188
             R+      GG I+   S  G  RG             ++  L ++A +++ KH+I VN
Sbjct: 124 AARQXIAQGRGGKIINXASQAG-RRG-EALVAIYCATKAAVISLTQSAGLDLIKHRINVN 181
Query: 189 GIARGLHLQDEYPIAV------------GQERAVKLVREAAPLHRWLDVKNDLASTVIYL 236
            IA G+ +  E+   V            G+++  +LV EA P  R      DL    I+L
Sbjct: 182 AIAPGV-VDGEHWDGVDALFARYENRPRGEKK--RLVGEAVPFGR-XGTAEDLTGXAIFL 237
Query: 237 ISDGSRYMTGTTIYVDG 253
            S  S Y+   T  VDG
Sbjct: 238 ASAESDYIVSQTYNVDG 254

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/265 (21%), Positives = 113/265 (42%), Gaps = 29/265 (10%)
Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK--GGQPVEVV 61
           + K V++T     + K++A   A    ++V+  N R     A  ++  +K  GG+ + V 
Sbjct: 6   EGKVVVITGSSTGLGKSMAIRFATEKAKVVV--NYRSKEDEANSVLEEIKKVGGEAIAVK 63
Query: 62  G-LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGE---DEFKKLVKI 117
           G + +E D        V  A +  G LD  ++       +++P+   E    ++ K++  
Sbjct: 64  GDVTVESD----VINLVQSAIKEFGKLDVMIN----NAGLENPVSSHEMSLSDWNKVIDT 115
Query: 118 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAA 177
           N    +   +   +   E+   G+++ ++S+   E+  +P           +  +  T A
Sbjct: 116 NLTGAFLGSREAIKYFVENDIKGTVINMSSV--HEKIPWPLFVHYAASKGGMKLMTETLA 173
Query: 178 MEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKNDLAST 232
           +E     IRVN I  G       PI     A  ++RA   V    P+  ++    ++A+ 
Sbjct: 174 LEYAPKGIRVNNIGPG---AINTPINAEKFADPEQRAD--VESMIPMG-YIGEPEEIAAV 227
Query: 233 VIYLISDGSRYMTGTTIYVDGAQSI 257
             +L S  + Y+TG T++ DG  ++
Sbjct: 228 AAWLASSEASYVTGITLFADGGMTL 252

>pdb|4IXT|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase (hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate Length = 254

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 12/186 (6%)
Query: 75  EAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 134
           E ++     LG++D  V       + +   +   ++++ +V+   + P+ L  AV  +MK
Sbjct: 61  ELIEAVTSALGHVDILVSNDIAPVEWRPIDKYAVEDYRDMVEALQIKPFALANAVASQMK 120
Query: 135 ESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKIRV-----NG 189
             K+ G I+F+TS   A  G +               L    + E+G+H I V     NG
Sbjct: 121 RRKS-GHIIFITS--AASFGPWKELSTYASARAGASALANALSKELGEHNIPVFAIAPNG 177
Query: 190 IARG--LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGT 247
           +  G   +     P     E  V  VR+   L R L  + +L   V +L S    Y+TG 
Sbjct: 178 VDSGDSPYYYPSEPWKTSPEH-VAWVRKYTALQR-LGTQKELGELVTFLASGSCDYLTGQ 235
Query: 248 TIYVDG 253
             ++ G
Sbjct: 236 VFWLAG 241

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 110/265 (41%), Gaps = 22/265 (8%)
Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-RRLSSVAEKMMGSLKGGQPVE 59
           M    K  ++T     I   IA   AK G  +VLV  +  RL   A     SLK    V 
Sbjct: 3   MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAAR----SLKEKFGVR 58
Query: 60  VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINF 119
           V+ + ++       D  V+      G  D  V+     G  +  ++  +++++   +++ 
Sbjct: 59  VLEVAVDVATPEGVDAVVESVRSSFGGADILVN-NAGTGSNETIMEAADEKWQFYWELHV 117
Query: 120 VAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAME 179
           +A   L + +   M+ ++ GG+I+   SI   +   Y           ++    +T A E
Sbjct: 118 MAAVRLARGLVPGMR-ARGGGAIIHNASICAVQPLWY--EPIYNVTKAALMMFSKTLATE 174
Query: 180 IGKHKIRVNGIARGLHLQDEYPIAVGQERA-----------VKLVREAAPLHRWLDVKND 228
           + K  IRVN I  GL L  ++ I   +E               +  E AP+ R+     +
Sbjct: 175 VIKDNIRVNCINPGLILTPDW-IKTAKELTKDNGGDWKGYLQSVADEHAPIKRFAS-PEE 232
Query: 229 LASTVIYLISDGSRYMTGTTIYVDG 253
           LA+  ++L S+ + Y  G+  +VDG
Sbjct: 233 LANFFVFLCSERATYSVGSAYFVDG 257

>pdb|1PWX|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec Complexed With Bromide Length = 254

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 80/195 (41%), Gaps = 13/195 (6%)
Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           M E       EAV  A    G +D  V    +  + Q   +   ++++  V+   + P+ 
Sbjct: 54  MSEQEPAELIEAVTSA---YGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFA 110
Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHK 184
           L+ AV  +MK+ K+ G I+F+TS      G +               L    + E+G++ 
Sbjct: 111 LVNAVASQMKKRKS-GHIIFITS--ATPFGPWKELSTYTSARAGACTLANALSKELGEYN 167
Query: 185 IRVNGIARG-LHLQDE---YPIAVGQERA--VKLVREAAPLHRWLDVKNDLASTVIYLIS 238
           I V  I    LH +D    YP    +     V  V++   L R L  + +L   V +L S
Sbjct: 168 IPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQR-LGTQKELGELVAFLAS 226
Query: 239 DGSRYMTGTTIYVDG 253
               Y+TG   ++ G
Sbjct: 227 GSCDYLTGQVFWLAG 241

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 56/264 (21%), Positives = 112/264 (42%), Gaps = 29/264 (10%)
Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK--GGQPVEVV 61
           + K V++T     + K++A   A    ++V+  N R     A  ++  +K  GG+ + V 
Sbjct: 6   EGKVVVITGSSTGLGKSMAIRFATEKAKVVV--NYRSKEDEANSVLEEIKKVGGEAIAVK 63
Query: 62  G-LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGE---DEFKKLVKI 117
           G + +E D        V  A +  G LD  ++       +++P+   E    ++ K++  
Sbjct: 64  GDVTVESD----VINLVQSAIKEFGKLDVMIN----NAGLENPVSSHEMSLSDWNKVIDT 115
Query: 118 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAA 177
           N    +   +   +   E+   G+++ ++S+   E+  +P           +  +  T A
Sbjct: 116 NLTGAFLGSREAIKYFVENDIKGTVINMSSV--HEKIPWPLFVHYAASKGGMKLMTETLA 173
Query: 178 MEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKNDLAST 232
           +E     IRVN I  G       PI     A  ++RA   V    P+  ++    ++A+ 
Sbjct: 174 LEYAPKGIRVNNIGPG---AINTPINAEKFADPEQRAD--VESMIPMG-YIGEPEEIAAV 227
Query: 233 VIYLISDGSRYMTGTTIYVDGAQS 256
             +L S  + Y+TG T++ DG  +
Sbjct: 228 AAWLASSEASYVTGITLFADGGMT 251

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 106/252 (42%), Gaps = 20/252 (7%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVL--VGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
           K   +T     I   IA  LA  G  + L  V    R  +V  ++     GG+ V +   
Sbjct: 32  KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEI--EQAGGRAVAI--- 86
Query: 64  DMEEDREG-AFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQ-VGEDEFKKLVKINFVA 121
              ++R+  A ++A+ +  + LG LD  V+          PL+     +F ++  +NF A
Sbjct: 87  -RADNRDAEAIEQAIRETVEALGGLDILVNSAGI--WHSAPLEETTVADFDEVXAVNFRA 143
Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIG 181
           P+  +++  R + +   GG I+ + S + AE   +P          ++  L +  A ++G
Sbjct: 144 PFVAIRSASRHLGD---GGRIITIGSNL-AELVPWPGISLYSASKAALAGLTKGLARDLG 199
Query: 182 KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 241
              I VN +  G    D  P A G     +  R A   +       D+A  V +L     
Sbjct: 200 PRGITVNIVHPGSTDTDXNP-ADGDHAEAQRERIATGSY---GEPQDIAGLVAWLAGPQG 255
Query: 242 RYMTGTTIYVDG 253
           +++TG ++ +DG
Sbjct: 256 KFVTGASLTIDG 267

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 6/153 (3%)
Query: 105 QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXX 164
           +  E  F + V +N  AP+F+++    R++++     I+ ++S   A R   P       
Sbjct: 109 ETTEQFFDRXVSVNAKAPFFIIQQALSRLRDNS---RIINISS--AATRISLPDFIAYSX 163
Query: 165 XXXSIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLD 224
              +I+    T A ++G   I VN I  G    D     +      +     +  +R  +
Sbjct: 164 TKGAINTXTFTLAKQLGARGITVNAILPGFVKTDXNAELLSDPXXKQYATTISAFNRLGE 223
Query: 225 VKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 257
           V+ D+A T  +L S  SR++TG  I V G   +
Sbjct: 224 VE-DIADTAAFLASPDSRWVTGQLIDVSGGSCL 255

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 102/259 (39%), Gaps = 32/259 (12%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVA-----EKMMGSLKGGQPVEV 60
           + +++   G +I +  A   A+ G  +VL  N     +       EK+      G+    
Sbjct: 9   RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL------GRSALA 62
Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFV 120
           +  D+    E   + A+  A    G +   VH        +   ++ E  + +++ +N  
Sbjct: 63  IKADLTNAAE--VEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLT 120
Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEI 180
           + +   K    +M +   GG+IV  +S  G + G  P          ++    R  A E+
Sbjct: 121 SLFLTAKTALPKMAK---GGAIVTFSSQAGRDGG-GPGALAYATSKGAVMTFTRGLAKEV 176
Query: 181 GKHKIRVNGIARGL---HLQDEYPIAVGQER---AVKLVREAAPLHRWLDVKNDLASTVI 234
           G  KIRVN +  G+      D +     +ER   A  L RE +          D+A  V 
Sbjct: 177 GP-KIRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGS--------SEDVAGLVA 227
Query: 235 YLISDGSRYMTGTTIYVDG 253
           +L SD + Y+TG    ++G
Sbjct: 228 FLASDDAAYVTGACYDING 246

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 5/149 (3%)
Query: 109 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXS 168
           ++F   +  N  + + L +     +K S  G +I+F++SI G                 +
Sbjct: 114 EDFSFHISTNLESAYHLSQLAHPLLKASGCG-NIIFMSSIAGVVSA--SVGSIYSATKGA 170
Query: 169 IHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKND 228
           ++QL R  A E     IR N +A  + +      AV  +   K+V    PL R+ +   +
Sbjct: 171 LNQLARNLACEWASDGIRANAVAPAV-IATPLAEAVYDDEFKKVVISRKPLGRFGE-PEE 228
Query: 229 LASTVIYLISDGSRYMTGTTIYVDGAQSI 257
           ++S V +L    + Y+TG TI VDG  ++
Sbjct: 229 VSSLVAFLCMPAASYITGQTICVDGGLTV 257

>pdb|2JJY|A Chain A, Crystal Structure Of Francisella Tularensis Enoyl Reductase (Ftfabi) With Bound Nad Length = 268

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 34/178 (19%)
Query: 82  QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGS 141
           Q+ GN   F+ C T EG       +  D    +   +F A    L   GR M +++   S
Sbjct: 98  QLEGN---FIDCVTREG-----FSIAHD----ISAYSFAA----LAKEGRSMMKNR-NAS 140
Query: 142 IVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYP 201
           +V LT  IGAE+ + P          S+   VR  A+ +G+  I+VN ++ G       P
Sbjct: 141 MVALT-YIGAEKAM-PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAG-------P 191
Query: 202 I----AVGQERAVKLVREAA---PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 252
           I    A G     K++   A   PL + +D+  ++ +TV +L SD +  +TG  ++VD
Sbjct: 192 IKTLAASGISNFKKMLDYNAMVSPLKKNVDIM-EVGNTVAFLCSDMATGITGEVVHVD 248

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 109/258 (42%), Gaps = 18/258 (6%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K V++T  G  I + IA   A     +V V   E RL+ + +++ G  K     EV+G+ 
Sbjct: 8   KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK-----EVLGVK 62
Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
            +  ++   +E V +  +    +D   +       +    +V ++ +++++ +N  + ++
Sbjct: 63  ADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFY 122
Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHK 184
             +AV   M   K G  ++  T+ I   RG +            I  L R+ A   G   
Sbjct: 123 SSRAVIPIML--KQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIG-LTRSIAAHYGDQG 179
Query: 185 IRVNGIARG-----LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD 239
           IR   +  G     + L    P  +G     KL+     L   L    D+A+ +++L SD
Sbjct: 180 IRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLM----SLSSRLAEPEDIANVIVFLASD 235
Query: 240 GSRYMTGTTIYVDGAQSI 257
            + ++ G  + VDG  ++
Sbjct: 236 EASFVNGDAVVVDGGLTV 253

>pdb|3NRC|A Chain A, Crystal Stucture Of The Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) In Complex With Nad+ And Triclosan Length = 280

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 34/178 (19%)
Query: 82  QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGS 141
           Q+ GN   F+ C T EG       +  D    +   +F A    L   GR M +++   S
Sbjct: 118 QLEGN---FIDCVTREG-----FSIAHD----ISAYSFAA----LAKEGRSMMKNR-NAS 160
Query: 142 IVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYP 201
           +V LT  IGAE+ + P          S+   VR  A+ +G+  I+VN ++ G       P
Sbjct: 161 MVALT-YIGAEKAM-PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAG-------P 211
Query: 202 I----AVGQERAVKLVREAA---PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 252
           I    A G     K++   A   PL + +D+  ++ +TV +L SD +  +TG  ++VD
Sbjct: 212 IKTLAASGISNFKKMLDYNAMVSPLKKNVDIM-EVGNTVAFLCSDMATGITGEVVHVD 268

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 18/255 (7%)
Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEV 60
           M  + K  L+T     I + IA  LA RG +++        +      +G+   G+    
Sbjct: 1   MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGA--NGK---- 54
Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKIN 118
            GL +      + +  ++K     G +D  V+     G  +D L  ++ ++E+  +++ N
Sbjct: 55  -GLMLNVTDPASIESVLEKIRAEFGEVDILVNN---AGITRDNLLMRMKDEEWNDIIETN 110
Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAM 178
             + + L KAV R M + K  G I+ + S++G                  +    ++ A 
Sbjct: 111 LSSVFRLSKAVMRAMMK-KRHGRIITIGSVVGTMG--NGGQANYAAAKAGLIGFSKSLAR 167
Query: 179 EIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 238
           E+    I VN +A G    D        +RA  L +   P  R L    ++A+ V +L S
Sbjct: 168 EVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQ--VPAGR-LGGAQEIANAVAFLAS 224
Query: 239 DGSRYMTGTTIYVDG 253
           D + Y+TG T++V+G
Sbjct: 225 DEAAYITGETLHVNG 239

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/264 (21%), Positives = 111/264 (42%), Gaps = 29/264 (10%)
Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK--GGQPVEVV 61
           + K V++T     + K++A   A    ++V+  N R     A  ++  +K  GG+ + V 
Sbjct: 6   EGKVVVITGSSTGLGKSMAIRFATEKAKVVV--NYRSKEDEANSVLEEIKKVGGEAIAVK 63
Query: 62  G-LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGE---DEFKKLVKI 117
           G + +E D        V  A +  G LD  ++       + +P+   E    ++ K++  
Sbjct: 64  GDVTVESD----VINLVQSAIKEFGKLDVMIN----NAGLANPVSSHEMSLSDWNKVIDT 115
Query: 118 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAA 177
           N    +   +   +   E+   G+++ ++S+   E+  +P           +  +  T A
Sbjct: 116 NLTGAFLGSREAIKYFVENDIKGTVINMSSV--HEKIPWPLFVHYAASKGGMKLMTETLA 173
Query: 178 MEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKNDLAST 232
           +E     IRVN I  G       PI     A  ++RA   V    P+  ++    ++A+ 
Sbjct: 174 LEYAPKGIRVNNIGPG---AINTPINAEKFADPEQRA--DVESMIPMG-YIGEPEEIAAV 227
Query: 233 VIYLISDGSRYMTGTTIYVDGAQS 256
             +L S  + Y+TG T++ DG  +
Sbjct: 228 AAWLASSEASYVTGITLFADGGMT 251

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 18/255 (7%)
Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEV 60
           M  + K  L+T     I + IA  LA RG +++        +      +G+   G+    
Sbjct: 1   MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGA--NGK---- 54
Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKIN 118
            GL +      + +  ++K     G +D  V+     G  +D L  ++ ++E+  +++ N
Sbjct: 55  -GLMLNVTDPASIESVLEKIRAEFGEVDILVNN---AGITRDNLLMRMKDEEWNDIIETN 110
Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAM 178
             + + L KAV R M + K  G I+ + S++G                  +    ++ A 
Sbjct: 111 LSSVFRLSKAVMRAMMK-KRHGRIITIGSVVGTMG--NGGQANFAAAKAGLIGFSKSLAR 167
Query: 179 EIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 238
           E+    I VN +A G    D        +RA  L +   P  R L    ++A+ V +L S
Sbjct: 168 EVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQ--VPAGR-LGGAQEIANAVAFLAS 224
Query: 239 DGSRYMTGTTIYVDG 253
           D + Y+TG T++V+G
Sbjct: 225 DEAAYITGETLHVNG 239

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 109/265 (41%), Gaps = 22/265 (8%)
Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-RRLSSVAEKMMGSLKGGQPVE 59
           M    K  ++T     I   IA   AK G  +VLV  +  RL   A     SLK    V 
Sbjct: 3   MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAAR----SLKEKFGVR 58
Query: 60  VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINF 119
           V+ + ++       D  V+      G  D  V+     G  +  ++  +++++   ++  
Sbjct: 59  VLEVAVDVATPEGVDAVVESVRSSFGGADILVN-NAGTGSNETIMEAADEKWQFYWELLV 117
Query: 120 VAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAME 179
           +A   L + +   M+ ++ GG+I+   SI   +   Y           ++    +T A E
Sbjct: 118 MAAVRLARGLVPGMR-ARGGGAIIHNASICAVQPLWY--EPIYNVTKAALMMFSKTLATE 174
Query: 180 IGKHKIRVNGIARGLHLQDEYPIAVGQERA-----------VKLVREAAPLHRWLDVKND 228
           + K  IRVN I  GL L  ++ I   +E               +  E AP+ R+     +
Sbjct: 175 VIKDNIRVNCINPGLILTPDW-IKTAKELTKDNGGDWKGYLQSVADEHAPIKRFAS-PEE 232
Query: 229 LASTVIYLISDGSRYMTGTTIYVDG 253
           LA+  ++L S+ + Y  G+  +VDG
Sbjct: 233 LANFFVFLCSERATYSVGSAYFVDG 257

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/258 (22%), Positives = 108/258 (41%), Gaps = 21/258 (8%)
Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAE--KMMGSLKGGQPVEV 60
           + K  L+T  G  I + IA  LAK    ++ +   ++   SV +  K  G    G   +V
Sbjct: 43  ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDV 102
Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKIN 118
                   ++    E ++K      N+D  V+     G  +D L  ++  DE++ +++ N
Sbjct: 103 -------SKKEEISEVINKILTEHKNVDILVN---NAGITRDNLFLRMKNDEWEDVLRTN 152
Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAM 178
             + +++ + + +RM  ++  G I+ ++SI+G    +             +    ++ A 
Sbjct: 153 LNSLFYITQPISKRMINNRY-GRIINISSIVGLTGNV--GQANYSSSKAGVIGFTKSLAK 209
Query: 179 EIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 238
           E+    I VN IA G    D        E+  K +    P  R +    ++A+   +L S
Sbjct: 210 ELASRNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGR-MGTPEEVANLACFLSS 266
Query: 239 DGSRYMTGTTIYVDGAQS 256
           D S Y+ G    +DG  S
Sbjct: 267 DKSGYINGRVFVIDGGLS 284

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 102/257 (39%), Gaps = 20/257 (7%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           ++ ++T     I   IA  L K G  + +   +  + +    + G   GG  VEV     
Sbjct: 13  RKAIVTGGSKGIGAAIARALDKAGATVAIA--DLDVMAAQAVVAGLENGGFAVEV----- 65
Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 125
           +  +  + D A+ KA   LG  D  +        M+  + + ++E+     +N    +  
Sbjct: 66  DVTKRASVDAAMQKAIDALGGFD-LLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLA 124
Query: 126 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHKI 185
            +   R    S   G IV   S+  A +   P          ++    +  A E+    I
Sbjct: 125 NQIACRHFLASNTKGVIVNTASL--AAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNI 182
Query: 186 RVNGIARGL---HLQDEYPIAVGQERAV--KLVR----EAAPLHRWLDVKNDLASTVIYL 236
           RVN +  G     +Q+   I   + R +  + VR       PL R ++   D+A  V++L
Sbjct: 183 RVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGR-IEEPEDVADVVVFL 241
Query: 237 ISDGSRYMTGTTIYVDG 253
            SD +R+MTG  I V G
Sbjct: 242 ASDAARFMTGQGINVTG 258

>pdb|2PTG|A Chain A, Crystal Structure Of Eimeria Tenella Enoyl Reductase Length = 319

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 15/178 (8%)
Query: 84  LGNLDAFVHCYTYEGKMQDPL-QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSI 142
           +G +D  VH      ++  PL Q     +   V  +  +   LL+     MKE   GGS 
Sbjct: 131 VGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKE---GGSA 187
Query: 143 VFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGKHK-IRVNGIARGLHLQDEYP 201
           + L S I +E+ +            ++    RT A E G+ + +RVN I+ G  L+    
Sbjct: 188 LAL-SYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAG-PLKSRAA 245
Query: 202 IAVGQ-------ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 252
            A+G+       + A+      APL + L+  +D+    ++L+S  +R +TG T+YVD
Sbjct: 246 SAIGKAGDKTFIDLAIDYSEANAPLQKELE-SDDVGRAALFLLSPLARAVTGATLYVD 302

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 115/263 (43%), Gaps = 32/263 (12%)
Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-RRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K V+++  G  +   +A   A++G  LVL      RL  VA+++  +   G+    VG D
Sbjct: 12  KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT---GRRALSVGTD 68
Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           + +D + A    VD+  +  G +D  ++       M+       +  +  +++       
Sbjct: 69  ITDDAQVA--HLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALR 126
Query: 125 LLKAVGRRMKESKAGGSIVFLTSII----GAERGLYPXXXXXXXXXXSIHQLVRTAAMEI 180
           L++     ++ESK  G++V + S++     A+ G Y           ++  + +T A E+
Sbjct: 127 LIQGFTPALEESK--GAVVNVNSMVVRHSQAKYGAY------KMAKSALLAMSQTLATEL 178
Query: 181 GKHKIRVNGIARGL-----------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDL 229
           G+  IRVN +  G            H   +Y  +V  E         + L R L  ++++
Sbjct: 179 GEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSV--EDIYNAAAAGSDLKR-LPTEDEV 235
Query: 230 ASTVIYLISDGSRYMTGTTIYVD 252
           AS ++++ SD +  +TG  + V+
Sbjct: 236 ASAILFMASDLASGITGQALDVN 258

>pdb|2AQI|A Chain A, Crystal Structure Of Isoniazid-Resistant I47t Enoyl-Acp(Coa) Reductase Mutant Enzyme From Mycobacterium Tuberculosis In Complex With Nadh Length = 269

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 117/268 (43%), Gaps = 33/268 (12%)
Query: 6   KRVLLTSDGDEISKNIAFHLAK----RGCRLVLVGNER-RLSSVAEKMMGSLKGGQPVEV 60
           KR+L++  G     +IAFH+A+    +G +LVL G +R RL+   +++   L    P+  
Sbjct: 8   KRILVS--GIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLT---QRITDRLPAKAPL-- 60
Query: 61  VGLDME-EDREGAFDEAVDKACQILGNLDAFVHCYTY---EGKMQDPL-QVGEDEFKKLV 115
           + LD++ E+   +    V +A      LD  VH   +    G   +P       +  K +
Sbjct: 61  LELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGI 120
Query: 116 KINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRT 175
            I+  +   + KA+   M     GGSIV +       R + P          ++  + R 
Sbjct: 121 HISAYSYASMAKALLPIMNP---GGSIVGMD--FDPSRAM-PAYNWMTVAKSALESVNRF 174
Query: 176 AAMEIGKHKIRVNGIARG----LHLQDEYPIAVGQERA--VKLVREA----APLHRWLDV 225
            A E GK+ +R N +A G    L +      A+G+E    ++L+ E     AP+   +  
Sbjct: 175 VAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKD 234
Query: 226 KNDLASTVIYLISDGSRYMTGTTIYVDG 253
              +A TV  L+SD     TG  IY DG
Sbjct: 235 ATPVAKTVCALLSDWLPATTGDIIYADG 262

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 102/252 (40%), Gaps = 19/252 (7%)
Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
           + ++ L+T     + + IA  LA  G  +V     RR     E +    K G     + +
Sbjct: 8   EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAA--RRAPD--ETLDIIAKDGGNASALLI 63
Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
           D   D   A D   D    IL N    +       +  D ++  E ++ +++ +N  A +
Sbjct: 64  DFA-DPLAAKDSFTDAGFDILVNNAGII-------RRADSVEFSELDWDEVMDVNLKALF 115
Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGL-YPXXXXXXXXXXSIHQLVRTAAMEIGK 182
           F  +A  + +      G +V + S++  + G+  P           + +L+   A E   
Sbjct: 116 FTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLL---ANEWAA 172
Query: 183 HKIRVNGIARGLHLQDEYPIAVGQERA-VKLVREAAPLHRWLDVKNDLASTVIYLISDGS 241
             I VN IA G +++     A+  + A  K + E  P  RW     D+A   ++L S  +
Sbjct: 173 KGINVNAIAPG-YIETNNTEALRADAARNKAILERIPAGRW-GHSEDIAGAAVFLSSAAA 230
Query: 242 RYMTGTTIYVDG 253
            Y+ G  + VDG
Sbjct: 231 DYVHGAILNVDG 242

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 9/142 (6%)
Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVE 59
           +E Q    ++T     I   IA  LA  G R+VL+  +++ L  V +++  S K  Q   
Sbjct: 3   LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEPI 62
Query: 60  VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTY--EGKMQDPLQVGEDEFKKLVKI 117
           V+ LD+ +  +   D  +    Q  G +D  V+      +G + +P+    D F+K+ +I
Sbjct: 63  VLPLDITDCTKA--DTEIKDIHQKYGAVDILVNAAAXFXDGSLSEPV----DNFRKIXEI 116
Query: 118 NFVAPWFLLKAVGRRMKESKAG 139
           N +A + +LK V    K  K G
Sbjct: 117 NVIAQYGILKTVTEIXKVQKNG 138

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	266
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	5e-41
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	6e-39
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	5e-38
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	2e-37
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	5e-37
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	1e-36
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	1e-36
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	6e-36
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	6e-36
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	1e-35
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	8e-35
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	2e-34
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	4e-34
3imf_A	257	Short chain dehydrogenase; structural genomics, in	5e-34
1xq1_A	266	Putative tropinone reducatse; structural genomics,	1e-33
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	3e-33
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	8e-33
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	1e-32
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	1e-32
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	3e-32
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	4e-32
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	4e-32
1spx_A	278	Short-chain reductase family member (5L265); paral	5e-32
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	6e-32
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	2e-31
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	2e-31
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	2e-31
3cxt_A	291	Dehydrogenase with different specificities; rossma	9e-31
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	9e-31
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	1e-30
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	1e-30
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	1e-30
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	1e-30
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	2e-30
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	2e-30
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	3e-30
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	4e-30
4e4y_A	244	Short chain dehydrogenase family protein; structur	4e-30
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	5e-30
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	6e-30
1xhl_A	297	Short-chain dehydrogenase/reductase family member	7e-30
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	1e-29
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	2e-29
1xkq_A	280	Short-chain reductase family member (5D234); parra	2e-29
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-29
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	3e-29
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	3e-29
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	5e-29
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	5e-29
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	7e-29
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	7e-29
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	8e-29
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	1e-28
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	1e-28
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	1e-28
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	1e-28
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	2e-28
4dqx_A	277	Probable oxidoreductase protein; structural genomi	2e-28
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	2e-28
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	3e-28
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	6e-28
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	1e-27
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	2e-27
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	2e-27
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	2e-27
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	3e-27
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	3e-27
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	4e-27
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	5e-27
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	6e-27
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	7e-27
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	7e-27
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	9e-27
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	9e-27
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	1e-26
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	2e-26
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	2e-26
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	2e-26
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	2e-26
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	2e-26
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	3e-26
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	3e-26
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-26
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	3e-26
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	4e-26
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	5e-26
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	5e-26
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	6e-26
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	6e-26
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	8e-26
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	8e-26
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-25
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	1e-25
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	4e-25
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	4e-25
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	9e-25
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	9e-25
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	1e-24
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	1e-24
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	2e-24
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	3e-24
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	3e-24
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	5e-24
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	8e-24
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	1e-23
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	1e-23
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	2e-23
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	2e-23
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	3e-23
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	5e-23
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	5e-23
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	6e-23
3rih_A	293	Short chain dehydrogenase or reductase; structural	8e-23
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	1e-22
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-22
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	7e-22
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	1e-21
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	2e-21
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	3e-21
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	5e-21
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	5e-21
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	6e-21
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	7e-21
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	2e-20
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	3e-20
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	5e-20
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	7e-20
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	8e-20
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	1e-19
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	2e-19
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	2e-19
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	2e-19
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	4e-19
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	6e-19
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	7e-19
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	1e-18
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	1e-18
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	1e-18
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	2e-18
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-18
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	2e-18
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	3e-18
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	3e-18
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	4e-18
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	7e-18
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	8e-18
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	1e-17
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-17
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	2e-17
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	4e-17
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	4e-17
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	5e-17
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	5e-17
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	6e-17
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	6e-17
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	2e-16
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-16
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	4e-16
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	4e-16
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	4e-16
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	5e-16
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	6e-16
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	1e-15
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	1e-15
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	1e-15
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	1e-15
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	2e-15
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	2e-15
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	2e-15
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	3e-15
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	2e-14
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	2e-14
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-14
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	2e-14
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	2e-14
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	4e-14
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	6e-14
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	1e-13
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	1e-13
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	1e-13
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	2e-13
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	2e-13
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	3e-13
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	3e-13
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	2e-12
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-12
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	6e-12
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	2e-12
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	1e-11
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	4e-11
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	2e-10
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	2e-10
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	2e-10
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	3e-10
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	1e-09
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	2e-08
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	3e-08
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-07

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  141 bits (359), Expect = 5e-41
 Identities = 48/274 (17%), Positives = 104/274 (37%), Gaps = 32/274 (11%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K   +T  G  + K +   L+  G + V+       L + AE++    + G  V  +  D
Sbjct: 27  KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISS--QTGNKVHAIQCD 84

Query: 65  M--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFV 120
           +   +  +    E +       G+ +  ++         +    ++  + +K +  I   
Sbjct: 85  VRDPDMVQNTVSELIKV----AGHPNIVINN---AAGNFISPTERLSPNAWKTITDIVLN 137

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
              F+   +G+++ +++ G + + +T+I   E G         +  A +  + ++ A E 
Sbjct: 138 GTAFVTLEIGKQLIKAQKGAAFLSITTIYA-ETGS-GFVVPSASAKAGVEAMSKSLAAEW 195

Query: 181 GKHKIRVNGIARGLHLQDEYPIA--------VGQERAVKLVREAAPLHRWLDVKNDLAST 232
           GK+ +R N I  G       PI                K +    P  R   V+ +LA+ 
Sbjct: 196 GKYGMRFNVIQPG-------PIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVE-ELANL 247

Query: 233 VIYLISDGSRYMTGTTIYVDGAQSITRPRMRSYM 266
             +L SD + ++ G  I  DG + +      + +
Sbjct: 248 AAFLCSDYASWINGAVIKFDGGEEVLISGEFNDL 281

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  136 bits (344), Expect = 6e-39
 Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 12/250 (4%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFDEAV 77
           +A  L   G  +++VG N  +L+   +++      G  +     D+  E++   A D   
Sbjct: 27  VAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT 86

Query: 78  DKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 137
                  G L   VHC      +    QV  + +++ V +N     ++LK   R M    
Sbjct: 87  AW----HGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG 142

Query: 138 AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQ 197
            GGS V ++SI            AYG   +++  L++ AA E+G   +RVN I  GL   
Sbjct: 143 -GGSFVGISSIAA-SNTH-RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRT 199

Query: 198 DEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 257
           D                   PL R  +V+ D+A+  ++L+SD + ++TG  I VDG Q +
Sbjct: 200 DLVAAITESAELSSDYAMCTPLPRQGEVE-DVANMAMFLLSDAASFVTGQVINVDGGQML 258

Query: 258 TR-PRMRSYM 266
            R P   + +
Sbjct: 259 RRGPDFSAML 268

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  133 bits (338), Expect = 5e-38
 Identities = 63/268 (23%), Positives = 115/268 (42%), Gaps = 33/268 (12%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K   +T  G  I   IA    + GC  V+   +  R+ + A K+ G+   G+    + +D
Sbjct: 28  KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT--GRRCLPLSMD 85

Query: 65  M--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFV 120
           +        A D+A+ +     G +D  ++C        +     +  + FK ++ I+  
Sbjct: 86  VRAPPAVMAAVDQALKE----FGRIDILINC---AAGNFLCPAGALSFNAFKTVMDIDTS 138

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
             + + + +  +      GG IV +T+ +G  RG        G+  A++  + R  A+E 
Sbjct: 139 GTFNVSRVLYEKFFRDH-GGVIVNITATLG-NRGQ-ALQVHAGSAKAAVDAMTRHLAVEW 195

Query: 181 GKHKIRVNGIARGLHLQDEYPIA--------VGQERAVKLVREAAPLHRWLDVKNDLAST 232
           G   IRVN +A G       PI+         G + ++     A+PL R  +   ++A +
Sbjct: 196 GPQNIRVNSLAPG-------PISGTEGLRRLGGPQASLSTKVTASPLQRLGNKT-EIAHS 247

Query: 233 VIYLISDGSRYMTGTTIYVDGAQSITRP 260
           V+YL S  + Y+TG  +  DG   +T P
Sbjct: 248 VLYLASPLASYVTGAVLVADGGAWLTFP 275

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  131 bits (332), Expect = 2e-37
 Identities = 63/245 (25%), Positives = 107/245 (43%), Gaps = 21/245 (8%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I   I   LA  G  +     N++ L+    +     KG + VE    D+    +R+   
Sbjct: 21  IGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS--KGFK-VEASVCDLSSRSERQELM 77

Query: 74  DEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 131
           +   +      G L+  V+        + +D      +++  ++ INF A + L      
Sbjct: 78  NTVANH---FHGKLNILVNNAGIVIYKEAKD---YTVEDYSLIMSINFEAAYHLSVLAHP 131

Query: 132 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 191
            +K S+  G++VF++S+ G    + P  A YGA   ++ QL R  A E  K  IRVNG+ 
Sbjct: 132 FLKASE-RGNVVFISSVSG-ALAV-PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVG 188

Query: 192 RGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTT 248
            G+    L +       Q+  +  + +   L R  + K +LA+ V +L    + Y+TG  
Sbjct: 189 PGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPK-ELAAMVAFLCFPAASYVTGQI 247

Query: 249 IYVDG 253
           IYVDG
Sbjct: 248 IYVDG 252

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  129 bits (328), Expect = 5e-37
 Identities = 59/251 (23%), Positives = 114/251 (45%), Gaps = 22/251 (8%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           +RVL+T  G  I +     L   G R+V V   +  L S+  +          +E V +D
Sbjct: 8   RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE-------CPGIEPVCVD 60

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVAP 122
           + +       EA ++A   +G +D  V+         +Q  L+V ++ F +  ++N  A 
Sbjct: 61  LGDW------EATERALGSVGPVDLLVNN---AAVALLQPFLEVTKEAFDRSFEVNLRAV 111

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
             + + V R +      G+IV ++S    +R +    + Y +   ++  L +  A+E+G 
Sbjct: 112 IQVSQIVARGLIARGVPGAIVNVSSQCS-QRAV-TNHSVYCSTKGALDMLTKVMALELGP 169

Query: 183 HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 242
           HKIRVN +   + +              K +    PL ++ +V+  + + +++L+SD S 
Sbjct: 170 HKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVE-HVVNAILFLLSDRSG 228

Query: 243 YMTGTTIYVDG 253
             TG+T+ V+G
Sbjct: 229 MTTGSTLPVEG 239

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  129 bits (328), Expect = 1e-36
 Identities = 59/249 (23%), Positives = 102/249 (40%), Gaps = 28/249 (11%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I   I   LA  G R+     NE+ L    E      KG   VE    D+    +R+   
Sbjct: 33  IGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE--KGLN-VEGSVCDLLSRTERDKLM 89

Query: 74  DEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 131
                      G L+  V+        + +D     E ++  ++  NF A + L +    
Sbjct: 90  QTVAHV---FDGKLNILVNNAGVVIHKEAKD---FTEKDYNIIMGTNFEAAYHLSQIAYP 143

Query: 132 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 191
            +K S+  G+++FL+SI G    L P  + Y A   +I+Q+ ++ A E  K  IRVN +A
Sbjct: 144 LLKASQ-NGNVIFLSSIAG-FSAL-PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVA 200

Query: 192 RGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
            G+           + P    Q+  +       P+ R    + ++++ + +L    + Y+
Sbjct: 201 PGVILTPLVETAIKKNP---HQKEEIDNFIVKTPMGRAGKPQ-EVSALIAFLCFPAASYI 256

Query: 245 TGTTIYVDG 253
           TG  I+ DG
Sbjct: 257 TGQIIWADG 265

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  129 bits (326), Expect = 1e-36
 Identities = 64/251 (25%), Positives = 116/251 (46%), Gaps = 22/251 (8%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
            R L+T  G  I ++    L   G ++V V      L S+A++  G       +E V +D
Sbjct: 8   LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG-------IEPVCVD 60

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVAP 122
           + +       +A +KA   +G +D  V+         MQ  L+V ++ F +   +N  + 
Sbjct: 61  LGDW------DATEKALGGIGPVDLLVNN---AALVIMQPFLEVTKEAFDRSFSVNLRSV 111

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
           + + + V R M      GSIV ++S++       P    Y +   ++  L +  AME+G 
Sbjct: 112 FQVSQMVARDMINRGVPGSIVNVSSMVA-HVTF-PNLITYSSTKGAMTMLTKAMAMELGP 169

Query: 183 HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 242
           HKIRVN +   + L D            + ++E  PL ++ +V+ D+ +++++L+SD S 
Sbjct: 170 HKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVE-DVVNSILFLLSDRSA 228

Query: 243 YMTGTTIYVDG 253
             +G  I VD 
Sbjct: 229 STSGGGILVDA 239

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  127 bits (322), Expect = 6e-36
 Identities = 54/247 (21%), Positives = 99/247 (40%), Gaps = 28/247 (11%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDE 75
           +    A  LA  G R++L       L+   + +      G     V  D+ +  E A + 
Sbjct: 21  LGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK---GYDAHGVAFDVTD--ELAIEA 75

Query: 76  AVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 133
           A  K      ++D  ++     G    +  +++  + ++K++  N  + + + ++  +RM
Sbjct: 76  AFSKLDAEGIHVDILINN---AGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRM 132

Query: 134 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG 193
               +GG I+ + S+   +    P  A Y A    I  L  + A E  +  I+ N I  G
Sbjct: 133 IARNSGGKIINIGSLTS-QAAR-PTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPG 190

Query: 194 LHLQDEY-------PIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
                 Y        +   ++     V+ + P  RW   + +L  T I+L S  S Y+ G
Sbjct: 191 ------YILTDMNTALIEDKQFD-SWVKSSTPSQRWGRPE-ELIGTAIFLSSKASDYING 242

Query: 247 TTIYVDG 253
             IYVDG
Sbjct: 243 QIIYVDG 249

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  128 bits (323), Expect = 6e-36
 Identities = 61/256 (23%), Positives = 104/256 (40%), Gaps = 25/256 (9%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           KR L+T     I K +A   A+ G ++ +   +   L  VA+++      G     +  D
Sbjct: 33  KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIA---GVGGKALPIRCD 89

Query: 65  M--EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFV 120
           +   +   G  D+   +    LG +D  V          M D   +  +EF+++   N  
Sbjct: 90  VTQPDQVRGMLDQMTGE----LGGIDIAVCNAGIVSVQAMLD---MPLEEFQRIQDTNVT 142

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
             +   +A  R M +   GG+I+   S+ G    +    + Y    A++  L +  A+E+
Sbjct: 143 GVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVEL 202

Query: 181 GKHKIRVNGIARGLHLQDEY---PIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI 237
             H+IRVN ++ G      Y    +         L     PL R    + +L    +YL 
Sbjct: 203 APHQIRVNSVSPG------YIRTELVEPLADYHALWEPKIPLGRMGRPE-ELTGLYLYLA 255

Query: 238 SDGSRYMTGTTIYVDG 253
           S  S YMTG+ I +DG
Sbjct: 256 SAASSYMTGSDIVIDG 271

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  126 bits (320), Expect = 1e-35
 Identities = 63/236 (26%), Positives = 94/236 (39%), Gaps = 13/236 (5%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK 79
           IA   A  G RLVL G +   L +    +      G  V  V +D+      A  E   +
Sbjct: 36  IARAFAAAGARLVLSGRDVSELDAARRALGEQF--GTDVHTVAIDLA--EPDAPAELARR 91

Query: 80  ACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 137
           A +  G LD  V+     G    Q  +      F   + +N  AP  L  AVG+ M  + 
Sbjct: 92  AAEAFGGLDVLVNN---AGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAG 148

Query: 138 AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQ 197
            GG+I+ + S       L P   AY    A +    +  A E+G H IR N +   + L 
Sbjct: 149 EGGAIITVASAAA-LAPL-PDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLT 206

Query: 198 DEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 253
           +      G E     +    PL R+     +++  V++L SD +  + G  I VDG
Sbjct: 207 EMGQRVWGDEAKSAPMIARIPLGRFAVPH-EVSDAVVWLASDAASMINGVDIPVDG 261

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  124 bits (315), Expect = 8e-35
 Identities = 45/245 (18%), Positives = 93/245 (37%), Gaps = 24/245 (9%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFDEAV 77
           +A   A++G  LVL      RL  VA+++     G +    VG D+  +       DE +
Sbjct: 27  LARRCAEQGADLVLAARTVERLEDVAKQVTD--TGRR-ALSVGTDITDDAQVAHLVDETM 83

Query: 78  DKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 137
                  G +D  ++       M+       +  +  +++       L++     ++ES 
Sbjct: 84  KA----YGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES- 138

Query: 138 AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA------ 191
             G++V + S++           AY    +++  + +T A E+G+  IRVN +       
Sbjct: 139 -KGAVVNVNSMVV-RHS-QAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWG 195

Query: 192 ---RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTT 248
              +              E         + L R      ++AS ++++ SD +  +TG  
Sbjct: 196 GTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTED-EVASAILFMASDLASGITGQA 254

Query: 249 IYVDG 253
           + V+ 
Sbjct: 255 LDVNC 259

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  124 bits (313), Expect = 2e-34
 Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 31/245 (12%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFDEAV 77
           IA  LA+ GC +V+   N    S  A+K+      G        D+   E+ +   +   
Sbjct: 37  IAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY--GVETMAFRCDVSNYEEVKKLLEAVK 94

Query: 78  DKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 135
           +K     G LD  V+     G  +     +   DEF++++++N    +++ +     ++E
Sbjct: 95  EK----FGKLDTVVNA---AGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRE 147

Query: 136 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH 195
           S    SI+ + S+   E  + P  +AY A    +  L +  A E G++ IRVN IA G  
Sbjct: 148 SD-NPSIINIGSLTVEEVTM-PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPG-- 203

Query: 196 LQDEY-------PIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTT 248
               +        +    E+    + +  PL R    + DL    ++L S+ ++Y+TG  
Sbjct: 204 ----WYRTKMTEAVFSDPEKL-DYMLKRIPLGRTGVPE-DLKGVAVFLASEEAKYVTGQI 257

Query: 249 IYVDG 253
           I+VDG
Sbjct: 258 IFVDG 262

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  123 bits (310), Expect = 4e-34
 Identities = 61/244 (25%), Positives = 96/244 (39%), Gaps = 12/244 (4%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I       LA+ G R+++   +E   +   E +      G  V  V +D+   E  + A 
Sbjct: 25  IGLACVTALAEAGARVIIADLDEAMATKAVEDLR---MEGHDVSSVVMDVTNTESVQNAV 81

Query: 74  DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 133
               ++     G +D  V C            + + ++ K V IN    +   +AVGR M
Sbjct: 82  RSVHEQ----EGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIM 137

Query: 134 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG 193
            E K  G IV + S+ G         AAY A  A +HQ +R+ A E   H IR N +A  
Sbjct: 138 LEQK-QGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPT 196

Query: 194 LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 253
                     + +           P+ R      ++AS V +L SD +  MTG  + VD 
Sbjct: 197 YIETTLTRFGMEKPELYDAWIAGTPMGRVGQPD-EVASVVQFLASDAASLMTGAIVNVDA 255

Query: 254 AQSI 257
             ++
Sbjct: 256 GFTV 259

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  122 bits (309), Expect = 5e-34
 Identities = 61/269 (22%), Positives = 114/269 (42%), Gaps = 34/269 (12%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K V++T     + K +A   AK G R+V+ G  + +L     ++      GQ +  V +D
Sbjct: 7   KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQ--FPGQ-ILTVQMD 63

Query: 65  M--EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFV 120
           +   +D +   ++  +K     G +D  ++     +    +D   +  + +  ++ I   
Sbjct: 64  VRNTDDIQKMIEQIDEK----FGRIDILINNAAGNFICPAED---LSVNGWNSVINIVLN 116

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
             ++  +A+G+   E    G+I+ + +         PG     A  A +  + +T A+E 
Sbjct: 117 GTFYCSQAIGKYWIEKGIKGNIINMVATYA-WDA-GPGVIHSAAAKAGVLAMTKTLAVEW 174

Query: 181 G-KHKIRVNGIARGLHLQDEYPIA--------VGQERAVKLVREAAPLHRWLDVKNDLAS 231
           G K+ IRVN IA G       PI            E   K   ++ PL R    + ++A 
Sbjct: 175 GRKYGIRVNAIAPG-------PIERTGGADKLWISEEMAKRTIQSVPLGRLGTPE-EIAG 226

Query: 232 TVIYLISDGSRYMTGTTIYVDGAQSITRP 260
              YL SD + Y+ GT + +DG Q + + 
Sbjct: 227 LAYYLCSDEAAYINGTCMTMDGGQHLHQY 255

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  121 bits (307), Expect = 1e-33
 Identities = 60/248 (24%), Positives = 93/248 (37%), Gaps = 31/248 (12%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I   I    A  G  +     NE  L+    K     KG Q V     D     +RE   
Sbjct: 26  IGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK--KGFQ-VTGSVCDASLRPEREKLM 82

Query: 74  DEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 131
                      G LD  ++           D      ++F   +  N  + + L +    
Sbjct: 83  QTVSSM---FGGKLDILINNLGAIRSKPTLD---YTAEDFSFHISTNLESAYHLSQLAHP 136

Query: 132 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 191
            +K S   G+I+F++SI G         + Y A   +++QL R  A E     IR N +A
Sbjct: 137 LLKASG-CGNIIFMSSIAG-VVSA-SVGSIYSATKGALNQLARNLACEWASDGIRANAVA 193

Query: 192 RGLHLQDEYPI------AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMT 245
             +       I      AV  +   K+V    PL R+ + + +++S V +L    + Y+T
Sbjct: 194 PAV-------IATPLAEAVYDDEFKKVVISRKPLGRFGEPE-EVSSLVAFLCMPAASYIT 245

Query: 246 GTTIYVDG 253
           G TI VDG
Sbjct: 246 GQTICVDG 253

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  120 bits (304), Expect = 3e-33
 Identities = 59/272 (21%), Positives = 105/272 (38%), Gaps = 39/272 (14%)

Query: 1   MENQAKRVLLT---------SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMG 50
           M  Q K+ LL          SDG  I +  A   A+ G  ++L+G NE +L  VA  +  
Sbjct: 1   MHYQPKQDLLNDRIILVTGASDG--IGREAAMTYARYGATVILLGRNEEKLRQVASHINE 58

Query: 51  SLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDE 110
             + G+  +   LD+         +   +       LD  +H     G +    +     
Sbjct: 59  --ETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQV 116

Query: 111 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 170
           ++ ++++N  A + L +A+   + +S   GS+VF +S +G  +G      AY A   +  
Sbjct: 117 WQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVG-RQGR-ANWGAYAASKFATE 173

Query: 171 QLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKN--- 227
            +++  A E  + ++RVN I  G                  +   A P     D +    
Sbjct: 174 GMMQVLADEYQQ-RLRVNCINPG-------GT------RTAMRASAFPTE---DPQKLKT 216

Query: 228 --DLASTVIYLISDGSRYMTGTTIYVDGAQSI 257
             D+    ++L+ D SR  TG T      +  
Sbjct: 217 PADIMPLYLWLMGDDSRRKTGMTFDAQPGRKP 248

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  120 bits (303), Expect = 8e-33
 Identities = 62/253 (24%), Positives = 111/253 (43%), Gaps = 19/253 (7%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I +  A  LA  G  +  +G     +  VA++++G+  GGQ    +  D+  E     A 
Sbjct: 40  IGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQ-AIALEADVSDELQMRNAV 96

Query: 74  DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 133
            + V K     G+LD  V      G       +   E+ + + +N    +  L      +
Sbjct: 97  RDLVLK----FGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYL 152

Query: 134 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG 193
           K+   GG+IV ++SI G      PGA AY A  A+   +V+  A+E+GKH IRVN +  G
Sbjct: 153 KQRG-GGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPG 211

Query: 194 L-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
                   + +  +             +      +    + D+A  + +L+S+ +R++TG
Sbjct: 212 AIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSE-DVAELIRFLVSERARHVTG 270

Query: 247 TTIYVDGAQSITR 259
           + +++DG Q + R
Sbjct: 271 SPVWIDGGQGLLR 283

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  119 bits (302), Expect = 1e-32
 Identities = 59/250 (23%), Positives = 103/250 (41%), Gaps = 15/250 (6%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFDEAV 77
            A   A+ G ++V+   N   L+ + +++ G   GG+    +  D+  E   E   + AV
Sbjct: 24  AALLFAREGAKVVVTARNGNALAELTDEIAGG--GGE-AAALAGDVGDEALHEALVELAV 80

Query: 78  DKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 137
            +     G LD   +     G M +   +  + +++ +  N  + +   K     +    
Sbjct: 81  RR----FGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG 136

Query: 138 AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQ 197
            GGS+ F +S +G   G   G A Y A  A +  LV+  A+E+G   IRVN +  G    
Sbjct: 137 -GGSLTFTSSFVGHTAGF-AGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDT 194

Query: 198 D--EYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 255
                 +          V     L R    + ++A   +YL SDG+ ++TG  +  DG  
Sbjct: 195 PANFANLPGAAPETRGFVEGLHALKRIARPE-EIAEAALYLASDGASFVTGAALLADGGA 253

Query: 256 SITRPRMRSY 265
           S+T+     Y
Sbjct: 254 SVTKAAENLY 263

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  118 bits (298), Expect = 1e-32
 Identities = 51/247 (20%), Positives = 95/247 (38%), Gaps = 36/247 (14%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM-EEDREGAFDE 75
           I + IA  L  RG R+ +    R     A+ +            +  D+ ++D +G    
Sbjct: 14  IGRAIAEALVARGYRVAIAS--RNPEEAAQSLGA--------VPLPTDLEKDDPKGLVKR 63

Query: 76  AVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 133
           A++     LG L   VH          +  L++  +E+++++ ++    + L +A    M
Sbjct: 64  ALEA----LGGLHVLVHA---AAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHM 116

Query: 134 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG 193
            E+   G ++F+ S+     G      AY     ++  L R  A E  +  IRVN +  G
Sbjct: 117 AEAG-WGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPG 175

Query: 194 LHLQDEYPIA-------VGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
                   +               + +    P+ RW   + ++A     L  D + Y+TG
Sbjct: 176 -------YVETEFTLPLRQNPELYEPITARIPMGRWARPE-EIARVAAVLCGDEAEYLTG 227

Query: 247 TTIYVDG 253
             + VDG
Sbjct: 228 QAVAVDG 234

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  117 bits (297), Expect = 3e-32
 Identities = 61/253 (24%), Positives = 110/253 (43%), Gaps = 18/253 (7%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
           K  L+T  +DG  I   IA  LA+ G  +V+    +  +      + G  +G   V    
Sbjct: 15  KVALVTASTDG--IGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQG--EGLS-VTGTV 69

Query: 63  LDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFV 120
             +   EDRE     AV+      G +D  V          + +   E+ + K++ +N  
Sbjct: 70  CHVGKAEDRERLVAMAVNL----HGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVK 125

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
           A   + KAV   M++   GGS++ ++S+       +P    Y     ++  L +  A+E+
Sbjct: 126 ATVLMTKAVVPEMEKRG-GGSVLIVSSVGA-YHP-FPNLGPYNVSKTALLGLTKNLAVEL 182

Query: 181 GKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG 240
               IRVN +A GL   +   +    +   + ++E+  + R  + + D A  V +L S+ 
Sbjct: 183 APRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPE-DCAGIVSFLCSED 241

Query: 241 SRYMTGTTIYVDG 253
           + Y+TG T+ V G
Sbjct: 242 ASYITGETVVVGG 254

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  118 bits (299), Expect = 4e-32
 Identities = 55/271 (20%), Positives = 110/271 (40%), Gaps = 35/271 (12%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           +  ++T     I K I   L + G  +V+      RL S A+++  +L   +   V+ + 
Sbjct: 19  QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQ 78

Query: 65  M----EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKIN 118
                EE+        +D      G ++  V+     +    +    +    +  +++ N
Sbjct: 79  CNIRNEEEVNNLVKSTLDT----FGKINFLVNNGGGQFLSPAEH---ISSKGWHAVLETN 131

Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAM 178
               +++ KAV     +   GGSIV +      + G +P A   GA  A ++ L ++ A+
Sbjct: 132 LTGTFYMCKAVYSSWMKEH-GGSIVNIIVP--TKAG-FPLAVHSGAARAGVYNLTKSLAL 187

Query: 179 EIGKHKIRVNGIARGLHLQDEYPIA---------VGQERAVKLVREAAPLHRWLDVKNDL 229
           E     IR+N +A G        I             +   +   +  P  R + V  ++
Sbjct: 188 EWACSGIRINCVAPG-------VIYSQTAVENYGSWGQSFFEGSFQKIPAKR-IGVPEEV 239

Query: 230 ASTVIYLISDGSRYMTGTTIYVDGAQSITRP 260
           +S V +L+S  + ++TG ++ VDG +S+   
Sbjct: 240 SSVVCFLLSPAASFITGQSVDVDGGRSLYTH 270

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  117 bits (296), Expect = 4e-32
 Identities = 61/251 (24%), Positives = 100/251 (39%), Gaps = 30/251 (11%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I +  A    + G  + +   +  R    A ++      G     V +D+  ++  + A 
Sbjct: 20  IGRAFAEAYVREGATVAIADIDIERARQAAAEI------GPAAYAVQMDVTRQDSIDAAI 73

Query: 74  DEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 131
              V+      G LD  V+         +   +++  + ++KL  IN     F L+A  R
Sbjct: 74  AATVEH----AGGLDILVNNAALF---DLAPIVEITRESYEKLFAINVAGTLFTLQAAAR 126

Query: 132 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 191
           +M     GG I+ + S  G  RG     A Y A  A++  L ++A +++ KH+I VN IA
Sbjct: 127 QMIAQGRGGKIINMASQAG-RRG-EALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIA 184

Query: 192 ---------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 242
                     G+           +    +LV EA P  R    + DL    I+L S  S 
Sbjct: 185 PGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAE-DLTGMAIFLASAESD 243

Query: 243 YMTGTTIYVDG 253
           Y+   T  VDG
Sbjct: 244 YIVSQTYNVDG 254

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  118 bits (297), Expect = 5e-32
 Identities = 51/251 (20%), Positives = 97/251 (38%), Gaps = 22/251 (8%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I +  A   A+ G ++ + G +  RL    ++++ +    Q V  V  D+  +  ++   
Sbjct: 18  IGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEIL 77

Query: 74  DEAVDKACQILGNLDAFVH---CYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVG 130
              + K     G LD  V+       + + +       + +   + +N  +   L K   
Sbjct: 78  STTLGK----FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAV 133

Query: 131 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 190
             +  +K  G IV ++SI        P    Y    A+I Q  R  A+++ +H IRVN I
Sbjct: 134 PHLSSTK--GEIVNISSIASGLHAT-PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSI 190

Query: 191 ARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD-GSR 242
           + GL        +      +      +  ++E  P       + D+A  + +L     S 
Sbjct: 191 SPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQ-DIAEVIAFLADRKTSS 249

Query: 243 YMTGTTIYVDG 253
           Y+ G  + VDG
Sbjct: 250 YIIGHQLVVDG 260

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  117 bits (295), Expect = 6e-32
 Identities = 61/253 (24%), Positives = 103/253 (40%), Gaps = 29/253 (11%)

Query: 17  ISKNIAFHLAKRGCRLVLV---GNERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREG 71
           I + I+  LA  G  + +      E + +   + +  +    Q    VGLD+  + + + 
Sbjct: 14  IGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA---DQKAVFVGLDVTDKANFDS 70

Query: 72  AFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAV 129
           A DEA +K    LG  D  V+     G  Q     +V E++ K++  +N  + +F ++A 
Sbjct: 71  AIDEAAEK----LGGFDVLVNN---AGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAA 123

Query: 130 GRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNG 189
            R+  E    G I+   SI    +G +P  +AY     ++  L + AA E+      VN 
Sbjct: 124 SRKFDELGVKGKIINAASIAA-IQG-FPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNA 181

Query: 190 IA---------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG 240
            A           +  +             K    +  L R   V  D+A  V +L S+ 
Sbjct: 182 YAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGR-PSVPEDVAGLVSFLASEN 240

Query: 241 SRYMTGTTIYVDG 253
           S Y+TG  + VDG
Sbjct: 241 SNYVTGQVMLVDG 253

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  115 bits (291), Expect = 2e-31
 Identities = 55/249 (22%), Positives = 102/249 (40%), Gaps = 34/249 (13%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFDEAV 77
           I    A  G RL+L+      L   A+++     G      +  D+   E    A  EA 
Sbjct: 27  ICRAFAASGARLILIDREAAALDRAAQEL-----GAAVAARIVADVTDAEAMTAAAAEAE 81

Query: 78  DKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 135
                 +  +   V+     G  ++ D L+  +  +++++ +N    ++  +A GR M  
Sbjct: 82  A-----VAPVSILVNS---AGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVA 133

Query: 136 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH 195
               G+IV L S+ G        A++Y A   ++HQL R  A E     +RVN +A G  
Sbjct: 134 RG-AGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPG-- 190

Query: 196 LQDEYPIA-------VGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTT 248
                 +A         +    +   +  P+ R  +   ++A+  ++L S  + Y+TG  
Sbjct: 191 -----YVATEMTLKMRERPELFETWLDMTPMGRCGEPS-EIAAAALFLASPAASYVTGAI 244

Query: 249 IYVDGAQSI 257
           + VDG  ++
Sbjct: 245 LAVDGGYTV 253

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  116 bits (292), Expect = 2e-31
 Identities = 58/248 (23%), Positives = 96/248 (38%), Gaps = 33/248 (13%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFD 74
           I + IA   A+ G  ++  G    +  VA+++     GG   E V  D+   E      +
Sbjct: 43  IGRAIAHGYARAGAHVLAWGRTDGVKEVADEI---ADGGGSAEAVVADLADLEGAANVAE 99

Query: 75  EAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR 132
           E           +D  V+     G        +V    +++++ +N  A W L ++ G  
Sbjct: 100 ELAA-----TRRVDVLVNN---AGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTA 151

Query: 133 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 192
           M      G IV + S++   +G     AAY A   ++  L R  A E     + VN +A 
Sbjct: 152 MLAHG-SGRIVTIASMLS-FQGG-RNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAP 208

Query: 193 GLHLQDEY-------PIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMT 245
           G      Y        +    ERA   +    P  RW   + D+    ++L SD + Y+ 
Sbjct: 209 G------YVVTANTAALRADDERA-AEITARIPAGRWATPE-DMVGPAVFLASDAASYVH 260

Query: 246 GTTIYVDG 253
           G  + VDG
Sbjct: 261 GQVLAVDG 268

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  115 bits (291), Expect = 2e-31
 Identities = 62/254 (24%), Positives = 101/254 (39%), Gaps = 28/254 (11%)

Query: 17  ISKNIAFHLAKRGCRLVLV-GNERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I    A  LA+ G  + L+  N   L      +    KG +       D+  EE   G  
Sbjct: 19  IGLATALRLAEEGTAIALLDMNREALEKAEASVRE--KGVE-ARSYVCDVTSEEAVIGTV 75

Query: 74  DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 133
           D  V       G +D   +   Y+G          D+F +++ IN    + +LKAV R+M
Sbjct: 76  DSVVRD----FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQM 131

Query: 134 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA-- 191
                 G IV   S+ G  +G  P  AAYG    +I  L  TAA+++  + IRVN I+  
Sbjct: 132 ITQN-YGRIVNTASMAG-VKGP-PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPG 188

Query: 192 ------------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD 239
                                  +   +   + +  + P+ R+ D+  ++   V +L+ D
Sbjct: 189 YMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDIN-EIPGVVAFLLGD 247

Query: 240 GSRYMTGTTIYVDG 253
            S +MTG  + + G
Sbjct: 248 DSSFMTGVNLPIAG 261

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  114 bits (287), Expect = 9e-31
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 35/261 (13%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK--GGQPVEVVGLDM--EEDREGA 72
           +    A   A     LVL  ++ + S  A K+   L+  G + V +   D+  EE+    
Sbjct: 23  LGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAK-VALYQSDLSNEEEVAKL 81

Query: 73  FDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAVG 130
           FD A  +     G +D  ++     GK+      +  E EF  +  IN    +F +K   
Sbjct: 82  FDFAEKE----FGKVDIAINT---VGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAA 134

Query: 131 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 190
           + M      G I+ + + +          + Y    A +    R A+ E+ K +I VN I
Sbjct: 135 KHMNP---NGHIITIATSLL--AAYTGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAI 189

Query: 191 ARGLHLQDEYPIA------VGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
           A G       P+          + +    +  A  ++   ++ D+A  + +L +DG  ++
Sbjct: 190 APG-------PMDTSFFYGQETKESTAFHKSQAMGNQLTKIE-DIAPIIKFLTTDGW-WI 240

Query: 245 TGTTIYVDGAQSITRPRMRSY 265
            G TI+ +G  + TR     +
Sbjct: 241 NGQTIFANGGYT-TREGHHHH 260

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  113 bits (286), Expect = 1e-30
 Identities = 55/246 (22%), Positives = 101/246 (41%), Gaps = 18/246 (7%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           + +L+T     I    A   A  G  +VL+G  E  L+ V++++     G     ++ L+
Sbjct: 15  RVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKS--AGQPQPLIIALN 72

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           +E      + E   +     G LD  +H  +  G      Q+ +++F +++ +N  A + 
Sbjct: 73  LENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFM 132

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME-IGKH 183
           L +A+   +K S+   SI F +S +G  +G      AYG    +   L++T A E  G  
Sbjct: 133 LTRALLPLLKRSE-DASIAFTSSSVG-RKGR-ANWGAYGVSKFATEGLMQTLADELEGVT 189

Query: 184 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
            +R N I          P A       +   +  PL+       D+    +YL+   S  
Sbjct: 190 AVRANSIN---------PGATRTGMRAQAYPDENPLNN--PAPEDIMPVYLYLMGPDSTG 238

Query: 244 MTGTTI 249
           + G  +
Sbjct: 239 INGQAL 244

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  114 bits (287), Expect = 1e-30
 Identities = 58/264 (21%), Positives = 103/264 (39%), Gaps = 32/264 (12%)

Query: 17  ISKNIAFHLAKRGCRLVL--VGNERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGA 72
           I  +IA  L ++G R+V+    +E     +  ++  + + G    +   D+         
Sbjct: 23  IGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAEL-NAARAGS-AVLCKGDLSLSSSLLDC 80

Query: 73  FDEAVDKACQILGNLDAFVH----------CYTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
            ++ +D + +  G  D  V+              +       +  + +  +L   N VAP
Sbjct: 81  CEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAP 140

Query: 123 WFLLKAVGRRMKE----SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAM 178
            FL++A  RR  E         S+V L   +  +  L PG   Y     ++  L R AA+
Sbjct: 141 LFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT-DLPL-PGFCVYTMAKHALGGLTRAAAL 198

Query: 179 EIGKHKIRVNGIARGLHLQDEYPI---AVGQERAVKLVREAAPLHRWLDVKNDLASTVIY 235
           E+    IRVN +A G                +   +  R   PL +       +A  + +
Sbjct: 199 ELAPRHIRVNAVAPG-------LSLLPPAMPQETQEEYRRKVPLGQSEASAAQIADAIAF 251

Query: 236 LISDGSRYMTGTTIYVDGAQSITR 259
           L+S  + Y+TGTT+ VDG   + R
Sbjct: 252 LVSKDAGYITGTTLKVDGGLILAR 275

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  113 bits (286), Expect = 1e-30
 Identities = 60/251 (23%), Positives = 99/251 (39%), Gaps = 27/251 (10%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I K IA  L K G  + +   N+    +VA ++    + G     V +D+   +    A 
Sbjct: 14  IGKAIALRLVKDGFAVAIADYNDATAKAVASEIN---QAGGHAVAVKVDVSDRDQVFAAV 70

Query: 74  DEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 131
           ++A       LG  D  V+         ++    +  +   K+  IN     + ++A   
Sbjct: 71  EQARKT----LGGFDVIVNNAGVAPSTPIES---ITPEIVDKVYNINVKGVIWGIQAAVE 123

Query: 132 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 191
             K+   GG I+   S  G   G  P  A Y +   ++  L +TAA ++    I VNG  
Sbjct: 124 AFKKEGHGGKIINACSQAG-HVG-NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYC 181

Query: 192 RGL-------HLQDEYPIAVGQ--ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 242
            G+        +  +   A G+          +   L R L    D+A+ V YL S  S 
Sbjct: 182 PGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGR-LSEPEDVAACVSYLASPDSD 240

Query: 243 YMTGTTIYVDG 253
           YMTG ++ +DG
Sbjct: 241 YMTGQSLLIDG 251

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  113 bits (286), Expect = 1e-30
 Identities = 60/254 (23%), Positives = 99/254 (38%), Gaps = 32/254 (12%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK--GGQPVEVVGLDM--EEDREGA 72
           I + IA  L +RG  +V+  N    S  AE+++  LK  G Q V  +  D+    +    
Sbjct: 33  IGRGIAIELGRRGASVVV--NYGSSSKAAEEVVAELKKLGAQGV-AIQADISKPSEVVAL 89

Query: 73  FDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAVG 130
           FD+AV       G LD  +      G        +V ++ F K+  +N    +F+ +   
Sbjct: 90  FDKAVSH----FGGLDFVMSN---SGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGL 142

Query: 131 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 190
           +  +    GG I+  +SI     G+ P  A Y    A++    R  A++ G   + VN I
Sbjct: 143 KHCRR---GGRIILTSSIAAVMTGI-PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCI 198

Query: 191 A-----------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD 239
           A              H        + QE+  + +    PL R      D+   V  L  +
Sbjct: 199 APGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPA-DIGRAVSALCQE 257

Query: 240 GSRYMTGTTIYVDG 253
            S ++ G  I + G
Sbjct: 258 ESEWINGQVIKLTG 271

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  114 bits (287), Expect = 2e-30
 Identities = 62/261 (23%), Positives = 112/261 (42%), Gaps = 26/261 (9%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSL--KGGQPVEVVGLDM--EEDREGA 72
           I + IA  L + G R+V+  +    +  A  +   L  +      V   D+        +
Sbjct: 35  IGRAIAVKLHQTGYRVVI--HYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPAS 92

Query: 73  FDEAVDKACQILGNLDAFV-------HCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPW 123
            +E ++   +  G  D  V            +G  +D    +  E +  +L+  N +AP+
Sbjct: 93  CEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPF 152

Query: 124 FLLKAVGRRMKES-----KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAM 178
            L  +  +R K +      +  SIV L   +  ++      + Y     ++  L ++AA+
Sbjct: 153 LLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMV-DQPC-MAFSLYNMGKHALVGLTQSAAL 210

Query: 179 EIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 238
           E+  + IRVNG+A G+      P+A+G+E      R   PL R       +A  VI+L+S
Sbjct: 211 ELAPYGIRVNGVAPGV---SLLPVAMGEE-EKDKWRRKVPLGRREASAEQIADAVIFLVS 266

Query: 239 DGSRYMTGTTIYVDGAQSITR 259
             ++Y+TG+ I VDG  S+  
Sbjct: 267 GSAQYITGSIIKVDGGLSLVH 287

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  113 bits (286), Expect = 2e-30
 Identities = 54/249 (21%), Positives = 94/249 (37%), Gaps = 18/249 (7%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD--MEEDREGAFDEAV 77
            A    + G ++V+    +     V      ++     +  V  D   +ED     D  +
Sbjct: 32  TAKLFVRYGAKVVIADIADDHGQKVCN----NIGSPDVISFVHCDVTKDEDVRNLVDTTI 87

Query: 78  DKACQILGNLDAFVHCYTYEGKMQDPL-QVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 136
            K     G LD               + + G ++FK+++ IN    + + K   R M  +
Sbjct: 88  AK----HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA 143

Query: 137 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL-- 194
           K  GSIVF  SI          +  Y A   ++  L  +   E+G++ IRVN ++  +  
Sbjct: 144 K-KGSIVFTASISSF-TAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVA 201

Query: 195 -HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 253
             L  +              + A      L  + D+A  V YL  D S+Y++G  + +DG
Sbjct: 202 SPLLTDVFGVDSSRVEELAHQAANLKGTLLRAE-DVADAVAYLAGDESKYVSGLNLVIDG 260

Query: 254 AQSITRPRM 262
             + T P  
Sbjct: 261 GYTRTNPAF 269

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  113 bits (284), Expect = 3e-30
 Identities = 46/248 (18%), Positives = 87/248 (35%), Gaps = 27/248 (10%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFDEAV 77
               L + G  +     +  RL +    +     G + +     D+          +   
Sbjct: 24  TVELLLEAGAAVAFCARDGERLRAAESALRQRFPGAR-LFASVCDVLDALQVRAFAEACE 82

Query: 78  DKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 135
                 LG     V+              +  ++ + + +++ F +    ++A   +++ 
Sbjct: 83  RT----LGCASILVNNAGQGRVSTF---AETTDEAWSEELQLKFFSVIHPVRAFLPQLES 135

Query: 136 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL- 194
                +IV + S++   +   P   A  A  A +  LVR+ A E     +RVNGI  GL 
Sbjct: 136 RA-DAAIVCVNSLLA-SQP-EPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLV 192

Query: 195 ---------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMT 245
                      ++E  +   Q  A     +  PL R      + A  +++L S  S Y T
Sbjct: 193 ESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPI-EAARAILFLASPLSAYTT 251

Query: 246 GTTIYVDG 253
           G+ I V G
Sbjct: 252 GSHIDVSG 259

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  113 bits (284), Expect = 4e-30
 Identities = 48/245 (19%), Positives = 92/245 (37%), Gaps = 24/245 (9%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFD 74
           I   +A   A+ G  + +  N       AE +  +   G   +    ++   +  E    
Sbjct: 46  IGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--GVHSKAYKCNISDPKSVEETIS 103

Query: 75  EAVDKACQILGNLDAFVHC---YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 131
           +         G +D FV        +G   D      D + K++ ++    ++    +G+
Sbjct: 104 QQEKD----FGTIDVFVANAGVTWTQGPEID--VDNYDSWNKIISVDLNGVYYCSHNIGK 157

Query: 132 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 191
             K++   GS++  +SI G    +    A Y    A+   L ++ A+E      RVN I+
Sbjct: 158 IFKKNG-KGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPF-ARVNTIS 215

Query: 192 RGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTT 248
            G     + D        +       +  PL R    + +L    +YL S+ S + TG+ 
Sbjct: 216 PGYIDTDITDFAS-----KDMKAKWWQLTPLGREGLTQ-ELVGGYLYLASNASTFTTGSD 269

Query: 249 IYVDG 253
           + +DG
Sbjct: 270 VVIDG 274

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  112 bits (282), Expect = 4e-30
 Identities = 54/261 (20%), Positives = 107/261 (40%), Gaps = 39/261 (14%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
              L+T     I K +   L +     V+  +      + +         + ++ +  D+
Sbjct: 5   ANYLVTGGSKGIGKAVVELLLQNKNHTVINID------IQQS-----FSAENLKFIKADL 53

Query: 66  --EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVA 121
             ++D     D   +       + D          +G + D   +  +  KK++ +N  +
Sbjct: 54  TKQQDITNVLDIIKN------VSFDGIFLNAGILIKGSIFD---IDIESIKKVLDLNVWS 104

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
             + +K +   +K    G SIVF  S         P + AY     +I Q+ ++ A+++ 
Sbjct: 105 SIYFIKGLENNLKV---GASIVFNGSDQC-FIAK-PNSFAYTLSKGAIAQMTKSLALDLA 159

Query: 182 KHKIRVNGIA---------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAST 232
           K++IRVN +          R L  +    + +  + A K   +  PL+R    + ++A  
Sbjct: 160 KYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQ-EIAEL 218

Query: 233 VIYLISDGSRYMTGTTIYVDG 253
           VI+L+SD S++MTG  I +DG
Sbjct: 219 VIFLLSDKSKFMTGGLIPIDG 239

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  112 bits (282), Expect = 5e-30
 Identities = 61/245 (24%), Positives = 105/245 (42%), Gaps = 18/245 (7%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFDEAV 77
            A  LA  G +L LV  +   L +    ++ +    + +  V  D+  E   E       
Sbjct: 29  TAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVA-DVSDEAQVEAYVTATT 87

Query: 78  DKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 137
           ++     G +D F +    EGK          EF K+V IN    +  L+ V + M+E  
Sbjct: 88  ER----FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG 143

Query: 138 AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG---- 193
             G +V   S+ G  RG+    + Y A    +  L R +A+E G++ IR+N IA G    
Sbjct: 144 -SGMVVNTASVGG-IRGI-GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWT 200

Query: 194 --LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 251
             +    +        +A +   +  P  R+ +   ++A+ V +L+SD + Y+  T + +
Sbjct: 201 PMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAP-EIAAVVAFLLSDDASYVNATVVPI 259

Query: 252 DGAQS 256
           DG QS
Sbjct: 260 DGGQS 264

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  112 bits (282), Expect = 6e-30
 Identities = 55/249 (22%), Positives = 89/249 (35%), Gaps = 26/249 (10%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDE 75
           I   IA  L K G  + +   +     +V   +            V +D+   R  + D 
Sbjct: 24  IGAAIARALDKAGATVAIADLDVMAAQAVVAGL------ENGGFAVEVDVT-KRA-SVDA 75

Query: 76  AVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 133
           A+ KA   LG  D         G   M+  + + ++E+     +N    +   +   R  
Sbjct: 76  AMQKAIDALGGFDLLCAN---AGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHF 132

Query: 134 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA-- 191
             S   G IV   S+     G  P  A Y A   ++    +  A E+    IRVN +   
Sbjct: 133 LASNTKGVIVNTASLAAK-VG-APLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPG 190

Query: 192 -------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
                      + +     +  E          PL R ++   D+A  V++L SD +R+M
Sbjct: 191 FVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGR-IEEPEDVADVVVFLASDAARFM 249

Query: 245 TGTTIYVDG 253
           TG  I V G
Sbjct: 250 TGQGINVTG 258

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  112 bits (283), Expect = 7e-30
 Identities = 53/263 (20%), Positives = 111/263 (42%), Gaps = 26/263 (9%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
           K V++T  S+G  I ++ A   AK G ++ + G NE RL    ++++ +    + +  V 
Sbjct: 27  KSVIITGSSNG--IGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 84

Query: 63  LDM--EEDREGAFDEAVDKACQILGNLDAFV--HCYTYEGKMQDPLQVGEDEFKKLVKIN 118
            D+     ++   +  + K     G +D  V            +      + ++K  K+N
Sbjct: 85  ADVTEASGQDDIINTTLAK----FGKIDILVNNAGANLADGTAN-TDQPVELYQKTFKLN 139

Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAM 178
           F A   + +     +   K  G IV ++SI+   +  + G   Y    A++ Q  R  A+
Sbjct: 140 FQAVIEMTQKTKEHLI--KTKGEIVNVSSIVAGPQA-HSGYPYYACAKAALDQYTRCTAI 196

Query: 179 EIGKHKIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAS 231
           ++ +H +RVN ++ G         +      +      +   +E  P+      + ++A+
Sbjct: 197 DLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPE-EIAN 255

Query: 232 TVIYLIS-DGSRYMTGTTIYVDG 253
            +++L   + S Y+ G +I  DG
Sbjct: 256 IIVFLADRNLSSYIIGQSIVADG 278

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  111 bits (279), Expect = 1e-29
 Identities = 52/246 (21%), Positives = 87/246 (35%), Gaps = 26/246 (10%)

Query: 17  ISKNIAFHLAKRGCRLVLV--GNERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGA 72
           +    A   A+ G  + +      +      +++      G   +     +   E  E  
Sbjct: 34  MGIEAARGCAEMGAAVAITYASRAQGAEENVKEL--EKTYGIKAKAYKCQVDSYESCEKL 91

Query: 73  FDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVG 130
             + V       G +DAF+     T +  + D      + +  +V+++    +   KAVG
Sbjct: 92  VKDVVAD----FGQIDAFIANAGATADSGILD---GSVEAWNHVVQVDLNGTFHCAKAVG 144

Query: 131 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 190
              KE    GS+V   S+ G          +Y    A    + R+ A E      RVN I
Sbjct: 145 HHFKERG-TGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWRDF-ARVNSI 202

Query: 191 ARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGT 247
           + G     L D  P     +   +L     P+ R    K +L    +Y  SD S Y TG 
Sbjct: 203 SPGYIDTGLSDFVP-----KETQQLWHSMIPMGRDGLAK-ELKGAYVYFASDASTYTTGA 256

Query: 248 TIYVDG 253
            + +DG
Sbjct: 257 DLLIDG 262

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  111 bits (279), Expect = 2e-29
 Identities = 55/259 (21%), Positives = 94/259 (36%), Gaps = 34/259 (13%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFDEAV 77
            +  LA+ G R+VL    E  L+  A  +     G        +D+  E       D  +
Sbjct: 27  TSRVLARAGARVVLADLPETDLAGAAASV-----GRG-AVHHVVDLTNEVSVRALIDFTI 80

Query: 78  DKACQILGNLDAFVHCYTYEGKMQDPL-QVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 136
           D      G LD   +   +       + Q+  D +     +N      + K    R+  +
Sbjct: 81  DT----FGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA 136

Query: 137 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL 196
             GG+IV ++S           + AY    A+I  L R  A + G+H +R N IA G   
Sbjct: 137 G-GGAIVNISSATA-HAAY-DMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPG--- 190

Query: 197 QDEYPI------AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIY 250
                +          +  V +        R  +   ++A  V +L SD + ++TG  I 
Sbjct: 191 ----LVRTPRLEVGLPQPIVDIFATHHLAGRIGEPH-EIAELVCFLASDRAAFITGQVIA 245

Query: 251 VDG---AQSITRPRMRSYM 266
            D    A     P++R+ +
Sbjct: 246 ADSGLLAHLPGLPQIRASV 264

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  111 bits (279), Expect = 2e-29
 Identities = 53/253 (20%), Positives = 101/253 (39%), Gaps = 26/253 (10%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I +  A   A+ G  + + G +  RL    + ++ S    + V  V  D+  E+ ++   
Sbjct: 18  IGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQII 77

Query: 74  DEAVDKACQILGNLD-----AFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKA 128
           +  + +     G +D     A        G        G D + K +K+N  A   + K 
Sbjct: 78  NSTLKQ----FGKIDVLVNNAGAAIPDAFGTTGT--DQGIDIYHKTLKLNLQAVIEMTKK 131

Query: 129 VGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVN 188
           V   +  SK  G IV ++SI+   +   P    Y    A++ Q  R+ A+++ K  IRVN
Sbjct: 132 VKPHLVASK--GEIVNVSSIVAGPQA-QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVN 188

Query: 189 GIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG- 240
            ++ G+        +      +      +   +E  P+      +  +A+ +++L     
Sbjct: 189 SVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPE-HIANIILFLADRNL 247

Query: 241 SRYMTGTTIYVDG 253
           S Y+ G +I  DG
Sbjct: 248 SFYILGQSIVADG 260

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  110 bits (278), Expect = 2e-29
 Identities = 56/267 (20%), Positives = 97/267 (36%), Gaps = 39/267 (14%)

Query: 1   MENQAKRVLLT--SDGDEISKNIAFHLAKRGCRLVL--VGNERRLSSVAEKMMGSLKGGQ 56
           M    K  ++T  S G  I   IA  LA  G  +V+   G       VA K+  +  GG+
Sbjct: 23  MMETNKVAIVTGASRG--IGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA--GGK 78

Query: 57  PVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFK 112
                  D+         F  A +      G +D  V+     G M      + G+  F 
Sbjct: 79  -ALTAQADVSDPAAVRRLFATAEEA----FGGVDVLVNN---AGIMPLTTIAETGDAVFD 130

Query: 113 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 172
           +++ +N    +  L+   +R++    GG I+ +++       L+P    Y A  A +  +
Sbjct: 131 RVIAVNLKGTFNTLREAAQRLRV---GGRIINMSTSQV--GLLHPSYGIYAAAKAGVEAM 185

Query: 173 VRTAAMEIGKHKIRVNGIARGLHLQDEYPI------AVGQERAVKLVREAAPLHRWLDVK 226
               + E+    I VN +A G       P           +       + APL R    +
Sbjct: 186 THVLSKELRGRDITVNAVAPG-------PTATDLFLEGKSDEVRDRFAKLAPLERLGTPQ 238

Query: 227 NDLASTVIYLISDGSRYMTGTTIYVDG 253
            D+A  V +L      ++ G  +  +G
Sbjct: 239 -DIAGAVAFLAGPDGAWVNGQVLRANG 264

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  110 bits (277), Expect = 3e-29
 Identities = 43/250 (17%), Positives = 85/250 (34%), Gaps = 28/250 (11%)

Query: 17  ISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I       +A  G  + ++         V EK+      G   +    D+   +      
Sbjct: 26  IGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF--GVKTKAYQCDVSNTDIVTKTI 83

Query: 74  DEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 131
            +        LG +   +     +         ++  ++F  +  +N    +   +AV +
Sbjct: 84  QQIDAD----LGPISGLIANAGVSVVKPA---TELTHEDFAFVYDVNVFGVFNTCRAVAK 136

Query: 132 RMKESKAGGSIVFLTSIIG-----AERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIR 186
              + +  GSIV  +S+       +          Y +  A+   LV+  A E     IR
Sbjct: 137 LWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIR 196

Query: 187 VNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
           VN ++ G                ++         PL+R+   + ++    I L+SD + Y
Sbjct: 197 VNALSPGYVNTDQTAHMD-----KKIRDHQASNIPLNRFAQPE-EMTGQAILLLSDHATY 250

Query: 244 MTGTTIYVDG 253
           MTG   ++DG
Sbjct: 251 MTGGEYFIDG 260

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  110 bits (276), Expect = 3e-29
 Identities = 56/276 (20%), Positives = 106/276 (38%), Gaps = 40/276 (14%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAKRGCRLVLVGNERR---LSSVAEKMMGSLKGGQPVEV 60
           K +L+T  S G  I K+I   L       V+ G  R    L  + EK       G     
Sbjct: 3   KVILVTGVSRG--IGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY------GDRFFY 54

Query: 61  VGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKIN 118
           V  D+  +   +   + AV       G +D+ V        +Q+  ++  + +KKL  IN
Sbjct: 55  VVGDITEDSVLKQLVNAAVKG----HGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDIN 110

Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAM 178
           F +   L+      +K  K  G++VF++S        +    AYG+  A+++    T A 
Sbjct: 111 FFSIVSLVGIALPELK--KTNGNVVFVSSDAC--NMYFSSWGAYGSSKAALNHFAMTLAN 166

Query: 179 EIGKHKIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAS 231
           E  + +++   +A G+       ++++    +      +K+ R     ++ LD     A+
Sbjct: 167 E--ERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSS-VPAT 223

Query: 232 TVIYLISDG-SRYMTGTTIYVDGAQSITRPRMRSYM 266
               L   G    + G  +  +       P +  +M
Sbjct: 224 VYAKLALHGIPDGVNGQYLSYND------PALADFM 253

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  109 bits (274), Expect = 5e-29
 Identities = 38/242 (15%), Positives = 78/242 (32%), Gaps = 19/242 (7%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEA 76
                   L + G  +V   ++   +  AE+     +       +    E+  E   D  
Sbjct: 13  AGPAAVEALTQDGYTVVC--HDASFADAAERQRFESENPG-TIALA---EQKPERLVDAT 66

Query: 77  VDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 134
           +         +D  V                  E + +++ +   + P  LL++    ++
Sbjct: 67  LQH----GEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLR 122

Query: 135 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL 194
            +  G S++F+TS +G  + L      YG   A+   LV +AA  + +  I +  I    
Sbjct: 123 AAG-GASVIFITSSVGK-KPL-AYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNF 179

Query: 195 ---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 251
                              + V    PL R      ++ + + +L S  +  + G     
Sbjct: 180 FNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPD-EMGALITFLASRRAAPIVGQFFAF 238

Query: 252 DG 253
            G
Sbjct: 239 TG 240

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  109 bits (276), Expect = 5e-29
 Identities = 44/246 (17%), Positives = 91/246 (36%), Gaps = 35/246 (14%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFDEAV 77
            A      G R+ + G  +  L +   ++      G     +  D     + +  +++  
Sbjct: 45  AAKRFVAEGARVFITGRRKDVLDAAIAEI------GGGAVGIQADSANLAELDRLYEKVK 98

Query: 78  DKACQILGNLDAFV-----HCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR 132
            +     G +D              G M    +V E+++      N     F ++     
Sbjct: 99  AE----AGRIDVLFVNAGG------GSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPL 148

Query: 133 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 192
           +     G S+V   S  G   G  P  + Y A  A++    R   +++    IR+N ++ 
Sbjct: 149 LAR---GSSVVLTGSTAG-STGT-PAFSVYAASKAALRSFARNWILDLKDRGIRINTLSP 203

Query: 193 G-----LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGT 247
           G       ++      V Q+  +  +    P+ R    + ++A+  ++L SD S ++TG 
Sbjct: 204 GPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAE-EVAAAALFLASDDSSFVTGA 262

Query: 248 TIYVDG 253
            ++VDG
Sbjct: 263 ELFVDG 268

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  109 bits (274), Expect = 7e-29
 Identities = 59/243 (24%), Positives = 104/243 (42%), Gaps = 20/243 (8%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK--GGQPVEVVGLDM--EEDREGA 72
           + K  A  LA+ G  +V+  N  R    A +    ++  G + V VV  ++      +  
Sbjct: 16  VGKAAAIRLAENGYNIVI--NYARSKKAALETAEEIEKLGVK-VLVVKANVGQPAKIKEM 72

Query: 73  FDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAVG 130
           F +  +      G LD FV+              ++ E  +   + IN  A  F  +   
Sbjct: 73  FQQIDET----FGRLDVFVNN---AASGVLRPVMELEETHWDWTMNINAKALLFCAQEAA 125

Query: 131 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 190
           + M+++  GG IV ++S+    R L       G   A++  L R  A+E+   +I VN +
Sbjct: 126 KLMEKNG-GGHIVSISSLGS-IRYL-ENYTTVGVSKAALEALTRYLAVELSPKQIIVNAV 182

Query: 191 ARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIY 250
           + G    D       +E  ++  R+  P  R +++K D+  TV +L+S  +  + G TI 
Sbjct: 183 SGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIK-DMVDTVEFLVSSKADMIRGQTII 241

Query: 251 VDG 253
           VDG
Sbjct: 242 VDG 244

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  109 bits (275), Expect = 7e-29
 Identities = 62/256 (24%), Positives = 92/256 (35%), Gaps = 33/256 (12%)

Query: 21  IAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDR----------- 69
            A  +A  G  ++ V    +L S       S       E V L    +R           
Sbjct: 27  HAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLS--ETVRLVEAANRRIVAAVVDTRD 84

Query: 70  EGAFDEAVDKACQILGNLDAFVH----CYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 125
                + VD     LG LD  V             Q    +  ++F+ ++ IN    W  
Sbjct: 85  FDRLRKVVDDGVAALGRLDIIVANAGVA-----APQAWDDITPEDFRDVMDINVTGTWNT 139

Query: 126 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 185
           + A   R+ E   GGSI+ ++S  G  +   P    Y A   ++  L R  A E+GKH I
Sbjct: 140 VMAGAPRIIEGGRGGSIILISSAAG-MKM-QPFMIHYTASKHAVTGLARAFAAELGKHSI 197

Query: 186 RVNGIARGL--------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI 237
           RVN +  G          +      A+     +  V          + + D+A TV +L 
Sbjct: 198 RVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPE-DIADTVCWLA 256

Query: 238 SDGSRYMTGTTIYVDG 253
           SD SR +T   I VD 
Sbjct: 257 SDESRKVTAAQIPVDQ 272

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  108 bits (273), Expect = 8e-29
 Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 19/241 (7%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I K IA   A  G  +V+   N    + V +++     GGQ       D+  E++     
Sbjct: 23  IGKEIAITFATAGASVVVSDINADAANHVVDEIQQ--LGGQ-AFACRCDITSEQELSALA 79

Query: 74  DEAVDKACQILGNLDAFVHCYTYEGKMQD-PLQVGEDEFKKLVKINFVAPWFLLKAVGRR 132
           D A+ K    LG +D  V+     G     P  +   +F++  ++N  + + L + V   
Sbjct: 80  DFAISK----LGKVDILVNN---AGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPE 132

Query: 133 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 192
           M+++  GG I+ +TS+   E        +Y +  A+   LVR  A ++G+  IRVNGIA 
Sbjct: 133 MEKNG-GGVILTITSMAA-ENKN-INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAP 189

Query: 193 GLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 252
           G  +  +   +V      + + +  P+ R    + D+A+  ++L S  + +++G  + V 
Sbjct: 190 GA-ILTDALKSVITPEIEQKMLQHTPIRRLGQPQ-DIANAALFLCSPAASWVSGQILTVS 247

Query: 253 G 253
           G
Sbjct: 248 G 248

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  108 bits (272), Expect = 1e-28
 Identities = 53/259 (20%), Positives = 111/259 (42%), Gaps = 27/259 (10%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K ++LT+    I +  A   A+ G +++    NE +L  + +        G  ++   LD
Sbjct: 7   KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY------PG--IQTRVLD 58

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
           + +       + +D+    +  LD   +   + + G + D     E ++   + +N  + 
Sbjct: 59  VTKK------KQIDQFANEVERLDVLFNVAGFVHHGTVLD---CEEKDWDFSMNLNVRSM 109

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
           + ++KA   +M   K  G+I+ ++S+  + +G+      Y    A++  L ++ A +  +
Sbjct: 110 YLMIKAFLPKMLAQK-SGNIINMSSVASSVKGV-VNRCVYSTTKAAVIGLTKSVAADFIQ 167

Query: 183 HKIRVNGIARGL----HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 238
             IR N +  G      LQ+        E A     +     R+   + ++A   +YL S
Sbjct: 168 QGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAE-EIAMLCVYLAS 226

Query: 239 DGSRYMTGTTIYVDGAQSI 257
           D S Y+TG  + +DG  S+
Sbjct: 227 DESAYVTGNPVIIDGGWSL 245

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  108 bits (273), Expect = 1e-28
 Identities = 60/253 (23%), Positives = 107/253 (42%), Gaps = 31/253 (12%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK--GGQPVEVVGLDM--EEDREGA 72
           I   +A HL + G ++V+  N    +  AEK++  +K  G   +  +  D+    +    
Sbjct: 30  IGAAVAVHLGRLGAKVVV--NYANSTKDAEKVVSEIKALGSDAI-AIKADIRQVPEIVKL 86

Query: 73  FDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAVG 130
           FD+AV       G+LD  V      G +       V E+EF ++  +N    +F+ +   
Sbjct: 87  FDQAVAH----FGHLDIAVSN---SGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAY 139

Query: 131 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 190
           R + E   GG IV  +S    +  + P  + Y     ++   VR  + + G  KI VN +
Sbjct: 140 RHLTE---GGRIVLTSSNTSKDFSV-PKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAV 195

Query: 191 A----------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG 240
           A             H       +   E+  ++   A+PLHR    + D+A+ V +L+S  
Sbjct: 196 APGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQ-DVANVVGFLVSKE 254

Query: 241 SRYMTGTTIYVDG 253
             ++ G  + +DG
Sbjct: 255 GEWVNGKVLTLDG 267

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  108 bits (273), Expect = 1e-28
 Identities = 52/248 (20%), Positives = 97/248 (39%), Gaps = 30/248 (12%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I    A      G  +V+   +ERRL    +++     G   VE V  D+   E  +   
Sbjct: 35  IGSTTARRALLEGADVVISDYHERRLGETRDQLAD--LGLGRVEAVVCDVTSTEAVDALI 92

Query: 74  DEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 131
            + V+K     G LD  V+      +  + D   + ++E+ +++ +   +     +A  R
Sbjct: 93  TQTVEK----AGRLDVLVNNAGLGGQTPVVD---MTDEEWDRVLNVTLTSVMRATRAALR 145

Query: 132 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 191
             +    GG IV   S++G  R      + Y A  A +  L R +A+E  +  +R+N ++
Sbjct: 146 YFRGVDHGGVIVNNASVLGW-RAQ-HSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVS 203

Query: 192 RGLHLQDEYPI------AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMT 245
             +                     +  +       R  +   ++A+T+ +L SD S YMT
Sbjct: 204 PSI-------ARHKFLEKTSSSELLDRLASDEAFGRAAEPW-EVAATIAFLASDYSSYMT 255

Query: 246 GTTIYVDG 253
           G  + V  
Sbjct: 256 GEVVSVSS 263

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  108 bits (273), Expect = 1e-28
 Identities = 58/254 (22%), Positives = 103/254 (40%), Gaps = 32/254 (12%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK--GGQPVEVVGLDM--EEDREGA 72
           I + +A  L +RGC++++  N    +  AE+++ ++K  G      V  ++   ED    
Sbjct: 41  IGREMAMELGRRGCKVIV--NYANSTESAEEVVAAIKKNGSDAA-CVKANVGVVEDIVRM 97

Query: 73  FDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAVG 130
           F+EAV       G LD         G +       V  +EF ++  IN    +F+ +   
Sbjct: 98  FEEAVKI----FGKLDIVCSN---SGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAY 150

Query: 131 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 190
           + ++    GG ++ + SI G  + + P  A Y     +I    R  A+++   KI VN +
Sbjct: 151 KHLEI---GGRLILMGSITGQAKAV-PKHAVYSGSKGAIETFARCMAIDMADKKITVNVV 206

Query: 191 A-----------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD 239
           A                         +E       + +PL R      D+A  V +L S+
Sbjct: 207 APGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPI-DIARVVCFLASN 265

Query: 240 GSRYMTGTTIYVDG 253
              ++TG  I +DG
Sbjct: 266 DGGWVTGKVIGIDG 279

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  108 bits (272), Expect = 2e-28
 Identities = 46/243 (18%), Positives = 93/243 (38%), Gaps = 19/243 (7%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK--GGQPVEVVGLDM--EEDREGA 72
           + K++A   A    ++V+  N R     A  ++  +K  GG+    V  D+  E D    
Sbjct: 19  LGKSMAIRFATEKAKVVV--NYRSKEDEANSVLEEIKKVGGE-AIAVKGDVTVESDVINL 75

Query: 73  FDEAVDKACQILGNLDAFVH--CYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVG 130
              A+ +     G LD  ++              ++   ++ K++  N    +   +   
Sbjct: 76  VQSAIKE----FGKLDVMINNAGLENPVSS---HEMSLSDWNKVIDTNLTGAFLGSREAI 128

Query: 131 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 190
           +   E+   G+++ ++S+   +   +P    Y A    +  +  T A+E     IRVN I
Sbjct: 129 KYFVENDIKGTVINMSSVHE-KIP-WPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNI 186

Query: 191 ARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIY 250
             G                   V    P+    + + ++A+   +L S  + Y+TG T++
Sbjct: 187 GPGAINTPINAEKFADPEQRADVESMIPMGYIGEPE-EIAAVAAWLASSEASYVTGITLF 245

Query: 251 VDG 253
            DG
Sbjct: 246 ADG 248

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  108 bits (272), Expect = 2e-28
 Identities = 65/272 (23%), Positives = 113/272 (41%), Gaps = 26/272 (9%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVE 59
           M+   +  ++T  G  I +  A   AK G  +V+   NE     VA ++      G    
Sbjct: 23  MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI------GSKAF 76

Query: 60  VVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLV 115
            V +D+   +D E   ++   K     G +D  V+   +   G +     + E+ + +++
Sbjct: 77  GVRVDVSSAKDAESMVEKTTAK----WGRVDVLVNNAGFGTTGNVVT---IPEETWDRIM 129

Query: 116 KINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRT 175
            +N    +   K V   M+ +  GGSI+  TS       +     AY A   +I  L R 
Sbjct: 130 SVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTA-TSAI-ADRTAYVASKGAISSLTRA 186

Query: 176 AAMEIGKHKIRVNGIARGL----HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAS 231
            AM+  K  IRVN +A G     +    +  A    +        A + R    + ++A 
Sbjct: 187 MAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAE-EIAE 245

Query: 232 TVIYLISDGSRYMTGTTIYVDGAQSITRPRMR 263
            +++L SD SR+ TG+ + VDG  SI    ++
Sbjct: 246 AMLFLASDRSRFATGSILTVDGGSSIGNHLVK 277

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  108 bits (272), Expect = 2e-28
 Identities = 60/245 (24%), Positives = 95/245 (38%), Gaps = 31/245 (12%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFDEAV 77
           +A  LA  GC ++    +     + A K+      G       +D+  E+      D  V
Sbjct: 45  VARRLADEGCHVLCADIDGDAADAAATKI------GCGAAACRVDVSDEQQIIAMVDACV 98

Query: 78  DKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 135
                  G +D  V      +   + D      ++F +++ IN    W   K    RM E
Sbjct: 99  AA----FGGVDKLVANAGVVHLASLID---TTVEDFDRVIAINLRGAWLCTKHAAPRMIE 151

Query: 136 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL- 194
              GG+IV L+S+ G    +  G  AYG   A I QL R  A E+    IR N +     
Sbjct: 152 RG-GGAIVNLSSLAGQ-VAV-GGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFV 208

Query: 195 ------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTT 248
                      +  A+G   A  ++       R    + ++A  V++L+SD +  +TGTT
Sbjct: 209 DTPMQQTAMAMFDGALGAGGARSMIAR--LQGRMAAPE-EMAGIVVFLLSDDASMITGTT 265

Query: 249 IYVDG 253
              DG
Sbjct: 266 QIADG 270

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  108 bits (271), Expect = 3e-28
 Identities = 56/259 (21%), Positives = 93/259 (35%), Gaps = 32/259 (12%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDRE------ 70
             ++ A  LA  G  ++       +S+       S +     E   L  ++ R+      
Sbjct: 27  QGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLD--ETARLVEDQGRKALTRVL 84

Query: 71  -----GAFDEAVDKACQILGNLDAFVH----CYTYEGKMQDPLQVGEDEFKKLVKINFVA 121
                 A  E V    +  G LD  V                 ++ ++++  ++ +N   
Sbjct: 85  DVRDDAALRELVADGMEQFGRLDVVVANAGVL-----SWGRVWELTDEQWDTVIGVNLTG 139

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
            W  L+A    M E+  GGSIV ++S  G  +   PG   Y A    +  L  T A+E+G
Sbjct: 140 TWRTLRATVPAMIEAGNGGSIVVVSSSAG-LKA-TPGNGHYSASKHGLTALTNTLAIELG 197

Query: 182 KHKIRVNGIARG-------LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI 234
           ++ IRVN I                   A                + ++    ++A  V 
Sbjct: 198 EYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTAD-EVADVVA 256

Query: 235 YLISDGSRYMTGTTIYVDG 253
           +L  DGS  +TGT I VD 
Sbjct: 257 WLAGDGSGTLTGTQIPVDK 275

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  106 bits (268), Expect = 6e-28
 Identities = 49/252 (19%), Positives = 97/252 (38%), Gaps = 35/252 (13%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I + IA  L + G R+ +   +    +  A +    L      + +  D+  E       
Sbjct: 41  IGQMIAQGLLEAGARVFICARDAEACADTATR----LSAYGDCQAIPADLSSEAGARRLA 96

Query: 74  DEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 131
               +        LD  V+    ++   ++         ++K++++N  + +  ++ +  
Sbjct: 97  QALGEL----SARLDILVNNAGTSWGAALES---YPVSGWEKVMQLNVTSVFSCIQQLLP 149

Query: 132 RMKESKA---GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVN 188
            ++ S +      ++ + S+ G    +   A AYG   A++HQL R  A E+    I VN
Sbjct: 150 LLRRSASAENPARVINIGSVAG-ISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVN 208

Query: 189 GIARGLHLQDEYPIA-------VGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 241
            IA G                     +A++    + P+ RW   + ++A+  I L     
Sbjct: 209 VIAPG-------RFPSRMTRHIANDPQALEADSASIPMGRWGRPE-EMAALAISLAGTAG 260

Query: 242 RYMTGTTIYVDG 253
            YMTG  I +DG
Sbjct: 261 AYMTGNVIPIDG 272

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  106 bits (266), Expect = 1e-27
 Identities = 47/259 (18%), Positives = 93/259 (35%), Gaps = 26/259 (10%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEV 60
           M   +  +L+T     +  + A  L + G R+++  + R   +   +    L+       
Sbjct: 23  MTLSSAPILITGASQRVGLHCALRLLEHGHRVII--SYRTEHASVTE----LRQAG-AVA 75

Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKIN 118
           +  D     E      +D       +L A VH           +      D F ++  ++
Sbjct: 76  LYGDF--SCETGIMAFIDLLKTQTSSLRAVVHNASEWL----AETPGEEADNFTRMFSVH 129

Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAM 178
            +AP+ +       +  S+    IV ++  +   +G      AY A  A +  L  + A 
Sbjct: 130 MLAPYLINLHCEPLLTASE-VADIVHISDDVT-RKGS-SKHIAYCATKAGLESLTLSFAA 186

Query: 179 EIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 238
                 ++VNGIA  L +                    + L      +  +  ++ YL+ 
Sbjct: 187 RFAPL-VKVNGIAPALLMFQP----KDDAAYRANALAKSALGIEPGAE-VIYQSLRYLLD 240

Query: 239 DGSRYMTGTTIYVDGAQSI 257
             S Y+TGTT+ V+G + +
Sbjct: 241 --STYVTGTTLTVNGGRHV 257

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  105 bits (264), Expect = 2e-27
 Identities = 49/245 (20%), Positives = 86/245 (35%), Gaps = 29/245 (11%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFDEAV 77
           IA     RG R+  +  +   L   A     +      V  V  D+  E D   A    +
Sbjct: 18  IATRFLARGDRVAALDLSAETLEETARTHWHA--YADKVLRVRADVADEGDVNAAIAATM 75

Query: 78  DKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 135
           ++     G +D  V+    T   +         ++F K++ +N    +   +AV   M  
Sbjct: 76  EQ----FGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLL 131

Query: 136 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH 195
               G IV + S+        PG +AY     ++ QL ++ A++     IR N +  G  
Sbjct: 132 QG-AGVIVNIASVAS-LVAF-PGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPG-- 186

Query: 196 LQDEYPIA-------VGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTT 248
                 I        + Q      V    P          +A  V++L  + + Y+ G  
Sbjct: 187 -----MIETPMTQWRLDQPELRDQVLARIPQKEIGTAA-QVADAVMFLAGEDATYVNGAA 240

Query: 249 IYVDG 253
           + +DG
Sbjct: 241 LVMDG 245

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  105 bits (264), Expect = 2e-27
 Identities = 50/251 (19%), Positives = 97/251 (38%), Gaps = 26/251 (10%)

Query: 17  ISKNIAFHLAKRGCRLVLV-GNERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I + IA   A     +V V   E RL+ + +++ G   G + V  V  D+  ++D E   
Sbjct: 19  IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRG--MGKE-VLGVKADVSKKKDVEEFV 75

Query: 74  DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 133
               +        +D   +       +    +V ++ +++++ +N  + ++  +AV   M
Sbjct: 76  RRTFET----YSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIM 131

Query: 134 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG 193
            +    G IV   SI G  RG     A Y      +  L R+ A   G   IR   +  G
Sbjct: 132 LKQG-KGVIVNTASIAG-IRGG-FAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPG 188

Query: 194 L-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
                                    L +  +   R  + + D+A+ +++L SD + ++ G
Sbjct: 189 TVKTNIGLGSSKPSE-----LGMRTLTKLMSLSSRLAEPE-DIANVIVFLASDEASFVNG 242

Query: 247 TTIYVDGAQSI 257
             + VDG  ++
Sbjct: 243 DAVVVDGGLTV 253

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  105 bits (265), Expect = 2e-27
 Identities = 62/263 (23%), Positives = 104/263 (39%), Gaps = 28/263 (10%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
           K  ++T  S G  I   IA   AK G  +VLV     RL   A  +    K G  V  V 
Sbjct: 8   KVAVITGSSSG--IGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKE--KFGVRVLEVA 63

Query: 63  LDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFV 120
           +D+   E  +   +          G  D  V+     G  +  ++  +++++   ++  +
Sbjct: 64  VDVATPEGVDAVVESVRSS----FGGADILVNN-AGTGSNETIMEAADEKWQFYWELLVM 118

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
           A   L + +   M+    GG+I+   SI   +         Y    A++    +T A E+
Sbjct: 119 AAVRLARGLVPGMRARG-GGAIIHNASICAVQ--PLWYEPIYNVTKAALMMFSKTLATEV 175

Query: 181 GKHKIRVNGIARGL-------HLQDEYPIAVGQ---ERAVKLVREAAPLHRWLDVKNDLA 230
            K  IRVN I  GL           E     G         +  E AP+ R+   + +LA
Sbjct: 176 IKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPE-ELA 234

Query: 231 STVIYLISDGSRYMTGTTIYVDG 253
           +  ++L S+ + Y  G+  +VDG
Sbjct: 235 NFFVFLCSERATYSVGSAYFVDG 257

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  104 bits (263), Expect = 3e-27
 Identities = 66/260 (25%), Positives = 108/260 (41%), Gaps = 21/260 (8%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K  L+T  G    + +A   AK G ++V+V  ++     VA ++      G     V  D
Sbjct: 10  KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI------GDAALAVAAD 63

Query: 65  M--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
           +  E D + A + A+ K     G +D  V+      K Q+   V  +EF ++V +N    
Sbjct: 64  ISKEADVDAAVEAALSK----FGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGV 119

Query: 123 WFLLKAVGRRMKESKAG---GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME 179
           + +   +    KE+ A      I+ + S  GA R   P  A Y A    +  + +  A+E
Sbjct: 120 YLMTSKLIPHFKENGAKGQECVILNVAST-GAGRPR-PNLAWYNATKGWVVSVTKALAIE 177

Query: 180 IGKHKIRVNGIARGLHLQD--EYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI 237
           +   KIRV  +             +    E   K  R++ P+ R L    DLA    +L 
Sbjct: 178 LAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPD-DLAEAAAFLC 236

Query: 238 SDGSRYMTGTTIYVDGAQSI 257
           S  +  +TG  + VDG +SI
Sbjct: 237 SPQASMITGVALDVDGGRSI 256

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  105 bits (263), Expect = 3e-27
 Identities = 58/260 (22%), Positives = 101/260 (38%), Gaps = 21/260 (8%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           K  ++T     I   IA  LA +G  +VL G          +   + + G  V   G D+
Sbjct: 5   KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL 64

Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
              +  A    VD A + +G +D  V+     +   ++D      +++  ++ +N  A +
Sbjct: 65  S--KGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIED---FPTEKWDAILALNLSAVF 119

Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 183
               A    MK+    G I+ + S  G         +AY A    +    +  A+E    
Sbjct: 120 HGTAAALPHMKKQG-FGRIINIASAHGL-VA-SANKSAYVAAKHGVVGFTKVTALETAGQ 176

Query: 184 KIRVNGIARG----------LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTV 233
            I  N I  G          +    E      +  A +L+ E  P  +++  +  L  T 
Sbjct: 177 GITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPE-QLGGTA 235

Query: 234 IYLISDGSRYMTGTTIYVDG 253
           ++L SD +  +TGTT+ VDG
Sbjct: 236 VFLASDAAAQITGTTVSVDG 255

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  104 bits (262), Expect = 4e-27
 Identities = 60/245 (24%), Positives = 105/245 (42%), Gaps = 27/245 (11%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFD 74
           I + IA   A+ G  + L         VAE + G            +D+  E +R    +
Sbjct: 18  IGRAIAQAFAREGALVALCDLRPEGKEVAEAIGG--------AFFQVDLEDERERVRFVE 69

Query: 75  EAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR 132
           EA       LG +D  V+       G       V   E+++++++N  AP  L     R 
Sbjct: 70  EAAYA----LGRVDVLVNNAAIAAPGSALT---VRLPEWRRVLEVNLTAPMHLSALAARE 122

Query: 133 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 192
           M++   GG+IV + S+ G         AAY A    +  L R+ A+++   +IRVN +A 
Sbjct: 123 MRKVG-GGAIVNVASVQG-LFAE-QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAP 179

Query: 193 GL----HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTT 248
           G      + +   ++   ER  +   +   L R    + ++A  V++L S+ + ++TG  
Sbjct: 180 GAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPE-EVAEAVLFLASEKASFITGAI 238

Query: 249 IYVDG 253
           + VDG
Sbjct: 239 LPVDG 243

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  104 bits (262), Expect = 5e-27
 Identities = 55/263 (20%), Positives = 95/263 (36%), Gaps = 40/263 (15%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDRE------ 70
             +  A  LA  G  ++ V    +++SV   +  + +       V L  +          
Sbjct: 25  QGRAHAVRLAADGADIIAVDLCDQIASVPYPL-ATPEELA--ATVKLVEDIGSRIVARQA 81

Query: 71  -----GAFDEAVDKACQILGNLDAFVH----CYTYEGKMQDPLQVGEDEFKKLVKINFVA 121
                 +   A+      LG LD  V               P+  G+D +  ++ +N   
Sbjct: 82  DVRDRESLSAALQAGLDELGRLDIVVANAGIA---------PMSAGDDGWHDVIDVNLTG 132

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIG--AERGLYPGAAAYGACAASIHQLVRTAAME 179
            +  +K     + +   GGSIV ++S  G        PG+  Y A    +  L+R  A  
Sbjct: 133 VYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANL 192

Query: 180 IGKHKIRVNGIA---------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLA 230
           +    IRVN I               ++              +  A P+   L  + D+A
Sbjct: 193 LAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPV-EVLAPE-DVA 250

Query: 231 STVIYLISDGSRYMTGTTIYVDG 253
           + V +L+SD +RY+TG T+ VD 
Sbjct: 251 NAVAWLVSDQARYITGVTLPVDA 273

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  103 bits (260), Expect = 6e-27
 Identities = 46/249 (18%), Positives = 85/249 (34%), Gaps = 32/249 (12%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFD 74
                A  L++ G  +    ++       E     L+         L    E++     +
Sbjct: 13  GGMGSALRLSEAGHTVAC--HDESFKQKDE-----LEAFA-ETYPQLKPMSEQEPAELIE 64

Query: 75  EAVDKACQILGNLDAFVHCYTYEGKMQDP---LQVGEDEFKKLVKINFVAPWFLLKAVGR 131
                     G +D  V     +    +     +   ++++  V+   + P+ L+ AV  
Sbjct: 65  AVTSA----YGQVDVLVSN---DIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVAS 117

Query: 132 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 191
           +MK+ K  G I+F+TS            + Y +  A    L    + E+G++ I V  I 
Sbjct: 118 QMKKRK-SGHIIFITSATP-FGPW-KELSTYTSARAGACTLANALSKELGEYNIPVFAIG 174

Query: 192 RGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
                     +     P     E  V  V++   L R    K +L   V +L S    Y+
Sbjct: 175 PNYLHSEDSPYFYPTEPWKTNPEH-VAHVKKVTALQRLGTQK-ELGELVAFLASGSCDYL 232

Query: 245 TGTTIYVDG 253
           TG   ++ G
Sbjct: 233 TGQVFWLAG 241

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  103 bits (260), Expect = 7e-27
 Identities = 57/247 (23%), Positives = 107/247 (43%), Gaps = 31/247 (12%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I + IA   AK G  +V+         +VA  +     GG+    +  ++  E+ RE   
Sbjct: 24  IGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQ--AGGK-AIGLECNVTDEQHREAVI 80

Query: 74  DEAVDKACQILGNLDAFVHCYTYEGKMQD-PLQVGEDEFKKLVKINFVAPWFLLKAVGRR 132
             A+D+     G +   V+     G     P  +   +F+   K+N  + + L +     
Sbjct: 81  KAALDQ----FGKITVLVNN---AGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPH 133

Query: 133 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 192
           M+++  GG+I+ ++S+ G         A+YG+  A+++ L R  A ++G   IRVN IA 
Sbjct: 134 MQKAG-GGAILNISSMAGE-NTN-VRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAP 190

Query: 193 GLHLQDEYPIA------VGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
           G        I       V      + + +  PL R  + + D+A+  ++L S  + +++G
Sbjct: 191 GA-------IKTDALATVLTPEIERAMLKHTPLGRLGEAQ-DIANAALFLCSPAAAWISG 242

Query: 247 TTIYVDG 253
             + V G
Sbjct: 243 QVLTVSG 249

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  103 bits (260), Expect = 7e-27
 Identities = 50/249 (20%), Positives = 94/249 (37%), Gaps = 20/249 (8%)

Query: 17  ISKNIAFHLAKRGCRLVL--VGNERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGA 72
           I + IA  LA  G  + +     +        ++     GG     +G ++      E  
Sbjct: 19  IGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQS--NGGSAF-SIGANLESLHGVEAL 75

Query: 73  FDEAVD--KACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKA 128
           +    +  +        D  ++     G        +  E  F ++V +N  AP+F+++ 
Sbjct: 76  YSSLDNELQNRTGSTKFDILINN---AGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQ 132

Query: 129 VGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVN 188
              R+++      I+ ++S     R   P   AY     +I+ +  T A ++G   I VN
Sbjct: 133 ALSRLRD---NSRIINISSAAT--RISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVN 187

Query: 189 GIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTT 248
            I  G    D     +      +     +  +R  +V+ D+A T  +L S  SR++TG  
Sbjct: 188 AILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVE-DIADTAAFLASPDSRWVTGQL 246

Query: 249 IYVDGAQSI 257
           I V G   +
Sbjct: 247 IDVSGGSCL 255

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  103 bits (259), Expect = 9e-27
 Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 20/242 (8%)

Query: 17  ISKNIAFHLAKRGCRLVLV-GNERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I +  A  LA+ G  +V+   N     +VA++++    GG     V +D+   E  +   
Sbjct: 21  IGQAYAEALAREGAAVVVADINAEAAEAVAKQIVA--DGGT-AISVAVDVSDPESAKAMA 77

Query: 74  DEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAVGR 131
           D  + +     G +D  V+     G M+      +  + +KK + +N     +  +AV +
Sbjct: 78  DRTLAE----FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYK 133

Query: 132 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 191
           +M +   GG+IV  +S        +  +  YG     I+ L +  + E+G   IR+N IA
Sbjct: 134 KMTKRG-GGAIVNQSSTAA-----WLYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIA 187

Query: 192 RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 251
            G  +  E       +  V  + +  PL R      DL    ++L+SD + ++TG    V
Sbjct: 188 PGP-IDTEANRTTTPKEMVDDIVKGLPLSRMGTPD-DLVGMCLFLLSDEASWITGQIFNV 245

Query: 252 DG 253
           DG
Sbjct: 246 DG 247

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  103 bits (260), Expect = 9e-27
 Identities = 45/240 (18%), Positives = 102/240 (42%), Gaps = 24/240 (10%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFDEAV 77
           I       G R+V+   +E    ++ ++             +  D+  E+D +    E +
Sbjct: 25  IVRAFVNSGARVVICDKDESGGRALEQE------LPG-AVFILCDVTQEDDVKTLVSETI 77

Query: 78  DKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 137
            +     G LD  V+   +    Q P +     F++L+++N +  + L K     ++  K
Sbjct: 78  RR----FGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLR--K 131

Query: 138 AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL--- 194
           + G+++ ++S++GA  G    A  Y A   ++  + +  A++   + +RVN I+ G    
Sbjct: 132 SQGNVINISSLVGA-IGQ-AQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWT 189

Query: 195 -HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 253
              ++   +      +++    A PL R      ++ +  ++L S+ + + TG  + V G
Sbjct: 190 PLWEELAALMPDPRASIREGMLAQPLGRMGQPA-EVGAAAVFLASE-ANFCTGIELLVTG 247

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  103 bits (258), Expect = 1e-26
 Identities = 55/251 (21%), Positives = 97/251 (38%), Gaps = 29/251 (11%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I + IA   A+ G  + + G +   + +    +     G   V  V  D+      +   
Sbjct: 22  IGRGIATVFARAGANVAVAGRSTADIDACVADLDQ--LGSGKVIGVQTDVSDRAQCDALA 79

Query: 74  DEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 131
             AV++     G +D          +  +     +  ++   +  +N    ++ ++A   
Sbjct: 80  GRAVEE----FGGIDVVCANAGVFPDAPL---ATMTPEQLNGIFAVNVNGTFYAVQACLD 132

Query: 132 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 191
            +  S   G +V  +SI G   G YPG + YGA  A+    +RTAA+E+  HKI VN I 
Sbjct: 133 ALIASG-SGRVVLTSSITGPITG-YPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIM 190

Query: 192 RGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
            G        I         E  +  +  + P       + D+     +L +  + Y+TG
Sbjct: 191 PGN-------IMTEGLLENGEEYIASMARSIPAGALGTPE-DIGHLAAFLATKEAGYITG 242

Query: 247 TTIYVDGAQSI 257
             I VDG Q +
Sbjct: 243 QAIAVDGGQVL 253

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  103 bits (258), Expect = 2e-26
 Identities = 63/263 (23%), Positives = 115/263 (43%), Gaps = 29/263 (11%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
           K  ++T  S G  +    A  LA+ G RL+L   N  +L + A ++   + G Q   V G
Sbjct: 8   KLAVVTAGSSG--LGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAG 65

Query: 63  -LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINF 119
            +    D +  F++A D     LG  D  V+     G  +    +++G +++ +  ++  
Sbjct: 66  DIREPGDIDRLFEKARD-----LGGADILVYST---GGPRPGRFMELGVEDWDESYRLLA 117

Query: 120 VAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME 179
            +  ++ +    +M E    G +V++ S+       +   A        +  +VRT A+E
Sbjct: 118 RSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLLR--PWQDLALSNIMRLPVIGVVRTLALE 174

Query: 180 IGKHKIRVNGIARGLH-------LQDEYPIAVGQ--ERAVKLVREAAPLHRWLDVKNDLA 230
           +  H + VN +   L        L +E     G   E A+K +    P+ R    + +LA
Sbjct: 175 LAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPE-ELA 233

Query: 231 STVIYLISDGSRYMTGTTIYVDG 253
           S V +L S+ + ++TG  I VDG
Sbjct: 234 SVVAFLASEKASFITGAVIPVDG 256

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  103 bits (258), Expect = 2e-26
 Identities = 49/249 (19%), Positives = 89/249 (35%), Gaps = 32/249 (12%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFDEAV 77
           +       G R+ ++  +  RL  +          G     V  D+   +D++ A +  +
Sbjct: 21  LVDRFVAEGARVAVLDKSAERLRELEVAH------GGNAVGVVGDVRSLQDQKRAAERCL 74

Query: 78  DKACQILGNLDAFVHC---YTYEGKMQD-PLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 133
                  G +D  +     + Y   + D P    +  F  +  +N       +KA    +
Sbjct: 75  AA----FGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPAL 130

Query: 134 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA-- 191
             S   GS+VF  S  G       G   Y A   ++  LVR  A E+  H +RVNG+A  
Sbjct: 131 VSS--RGSVVFTISNAGF-YPN-GGGPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPG 185

Query: 192 ------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG-SRYM 244
                 RG         ++       +++   P+ R   ++ +     ++  + G S   
Sbjct: 186 GMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALE-EYTGAYVFFATRGDSLPA 244

Query: 245 TGTTIYVDG 253
           TG  +  DG
Sbjct: 245 TGALLNYDG 253

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  102 bits (257), Expect = 2e-26
 Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 30/254 (11%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD--MEEDREGAFDEAV 77
            A      G R+VL    +   ++ A ++      G       LD  +EED +     A 
Sbjct: 21  AARQAVAAGARVVLADVLDEEGAATAREL------GDAARYQHLDVTIEEDWQRVVAYAR 74

Query: 78  DKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 135
           ++     G++D  V+    +    ++       + F+K+V+IN    +  +K V   MK+
Sbjct: 75  EE----FGSVDGLVNNAGISTGMFLET---ESVERFRKVVEINLTGVFIGMKTVIPAMKD 127

Query: 136 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL- 194
           +  GGSIV ++S  G   GL    ++YGA    +  L + AA+E+G  +IRVN +  G+ 
Sbjct: 128 AG-GGSIVNISSAAGL-MGL-ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMT 184

Query: 195 --HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 252
              +  E  I  G+           P+ R  +   ++A  V+ L+SD S Y+TG  + VD
Sbjct: 185 YTPMTAETGIRQGEGNY-----PNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVD 239

Query: 253 GAQSITRPRMRSYM 266
           G  +   P ++  M
Sbjct: 240 GGWTTG-PTVKYVM 252

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  102 bits (257), Expect = 2e-26
 Identities = 58/247 (23%), Positives = 96/247 (38%), Gaps = 30/247 (12%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK--GGQPVEVVGLDM--EEDREGA 72
           I +  A   A+ G  +VL       +  A   +  ++  G      +  D+    + E A
Sbjct: 20  IGRACAIRFAQEGANVVL--TYNGAAEGAATAVAEIEKLGRS-ALAIKADLTNAAEVEAA 76

Query: 73  FDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR 132
              A DK     G +   VH        +   ++ E  + +++ +N  + +   K    +
Sbjct: 77  ISAAADK----FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPK 132

Query: 133 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 192
           M +   GG+IV  +S  G   G  PGA AY     ++    R  A E+G  KIRVN +  
Sbjct: 133 MAK---GGAIVTFSSQAG-RDGGGPGALAYATSKGAVMTFTRGLAKEVGP-KIRVNAVCP 187

Query: 193 GLHLQDEYPI------AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
           G        I         +    + V  A  L R    + D+A  V +L SD + Y+TG
Sbjct: 188 G-------MISTTFHDTFTKPEVRERVAGATSLKREGSSE-DVAGLVAFLASDDAAYVTG 239

Query: 247 TTIYVDG 253
               ++G
Sbjct: 240 ACYDING 246

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  102 bits (256), Expect = 2e-26
 Identities = 53/243 (21%), Positives = 96/243 (39%), Gaps = 28/243 (11%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFDEAV 77
           IA    + G ++++ G +       A+    S+     ++    D   E+     FD   
Sbjct: 22  IATKFVEEGAKVMITGRHSDVGEKAAK----SVGTPDQIQFFQHDSSDEDGWTKLFDATE 77

Query: 78  DKACQILGNLDAFV-----HCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR 132
                  G +   V              +   +    E++KL+ +N    +F  +   +R
Sbjct: 78  KA----FGPVSTLVNNAGI------AVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQR 127

Query: 133 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG--KHKIRVNGI 190
           MK    G SI+ ++SI G   G  P   AY A   ++  + ++AA++     + +RVN +
Sbjct: 128 MKNKGLGASIINMSSIEG-FVGD-PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTV 185

Query: 191 ARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIY 250
             G           G E A+   R   P+    +   D+A   +YL S+ S++ TG+   
Sbjct: 186 HPGYIKTPLVDDLPGAEEAMSQ-RTKTPMGHIGEPN-DIAYICVYLASNESKFATGSEFV 243

Query: 251 VDG 253
           VDG
Sbjct: 244 VDG 246

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  102 bits (257), Expect = 3e-26
 Identities = 45/254 (17%), Positives = 98/254 (38%), Gaps = 40/254 (15%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFDEAV 77
           IA      G +++ +  ++               G    + +  D+   +  + + D   
Sbjct: 24  IAERFVDEGSKVIDLSIHD--------------PGEAKYDHIECDVTNPDQVKASIDHIF 69

Query: 78  DKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 135
            +     G++   V+       GK++    +   E+++++ +N    ++  K     M  
Sbjct: 70  KE----YGSISVLVNNAGIESYGKIES---MSMGEWRRIIDVNLFGYYYASKFAIPYMIR 122

Query: 136 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA---- 191
           S+   SIV ++S+          A+AY     ++  L ++ A++     +R N +     
Sbjct: 123 SR-DPSIVNISSVQA-SIIT-KNASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATI 178

Query: 192 -----RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
                R     +     +  E+ +       P+ R    + ++AS V +L S  + ++TG
Sbjct: 179 DTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQ-EVASAVAFLASREASFITG 237

Query: 247 TTIYVDGAQSITRP 260
           T +YVDG  SI  P
Sbjct: 238 TCLYVDGGLSIRAP 251

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  101 bits (255), Expect = 3e-26
 Identities = 57/269 (21%), Positives = 105/269 (39%), Gaps = 41/269 (15%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
           K+ ++   + G  +       L + G  ++L G NE  ++ + E+       G  V  + 
Sbjct: 9   KKAIVIGGTHG--MGLATVRRLVEGGAEVLLTGRNESNIARIREEF------GPRVHALR 60

Query: 63  LDM--EEDREGAFDEAVDKACQILGNLD-----AFVHCYTYEGKMQDPLQVGEDEFKKLV 115
            D+    +       A       LG +D     A V       +++   QV E  + +  
Sbjct: 61  SDIADLNEIAVLGAAAGQT----LGAIDLLHINAGV------SELEPFDQVSEASYDRQF 110

Query: 116 KINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRT 175
            +N    +F ++ +   ++E   GGSIVF +S+   E G  PG + Y A  A++      
Sbjct: 111 AVNTKGAFFTVQRLTPLIRE---GGSIVFTSSVAD-EGGH-PGMSVYSASKAALVSFASV 165

Query: 176 AAMEIGKHKIRVNGIARGL----HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAS 231
            A E+    IRVN ++ G                +     L     P+ R      ++A 
Sbjct: 166 LAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTAD-EVAR 224

Query: 232 TVIYLISDGSRYMTGTTIYVDG--AQSIT 258
            V++L  + + + TG  + VDG   Q ++
Sbjct: 225 AVLFLAFE-ATFTTGAKLAVDGGLGQKLS 252

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  102 bits (256), Expect = 3e-26
 Identities = 57/247 (23%), Positives = 100/247 (40%), Gaps = 32/247 (12%)

Query: 17  ISKNIAFHLAKRGCRLVL--VGNERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGA 72
           I   IA  LA  G  + L  V    R  +V  ++     GG+ V  +  D    E  E A
Sbjct: 43  IGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQ--AGGRAV-AIRADNRDAEAIEQA 99

Query: 73  FDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAVG 130
             E V+     LG LD  V+     G        +    +F +++ +NF AP+  +++  
Sbjct: 100 IRETVEA----LGGLDILVNS---AGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSAS 152

Query: 131 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 190
           R + +   GG I+ + S +      +PG + Y A  A++  L +  A ++G   I VN +
Sbjct: 153 RHLGD---GGRIITIGSNLAELVP-WPGISLYSASKAALAGLTKGLARDLGPRGITVNIV 208

Query: 191 ARGLHLQDEYPIA----VGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
             G                     +  RE      + + + D+A  V +L     +++TG
Sbjct: 209 HPG-------STDTDMNPADGDHAEAQRERIATGSYGEPQ-DIAGLVAWLAGPQGKFVTG 260

Query: 247 TTIYVDG 253
            ++ +DG
Sbjct: 261 ASLTIDG 267

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  102 bits (256), Expect = 3e-26
 Identities = 46/247 (18%), Positives = 93/247 (37%), Gaps = 39/247 (15%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFDEAV 77
           +   L + G ++V V  +E+   +V++                +D+  EE+ + A ++  
Sbjct: 30  VVDALVRYGAKVVSVSLDEKSDVNVSDH-------------FKIDVTNEEEVKEAVEKTT 76

Query: 78  DKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 135
            K     G +D  V+         +        + +++++ +N    + + K     M  
Sbjct: 77  KK----YGRIDILVNNAGIEQYSPLHL---TPTEIWRRIIDVNVNGSYLMAKYTIPVMLA 129

Query: 136 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA---- 191
               GSI+ + S+          AAAY     ++  L R+ A++     IR N +     
Sbjct: 130 IG-HGSIINIASVQS-YAAT-KNAAAYVTSKHALLGLTRSVAIDYAPK-IRCNAVCPGTI 185

Query: 192 -----RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
                      +        ER ++      P+ R    + ++A  V +L SD S ++TG
Sbjct: 186 MTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPE-EVAEVVAFLASDRSSFITG 244

Query: 247 TTIYVDG 253
             + VDG
Sbjct: 245 ACLTVDG 251

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  101 bits (255), Expect = 4e-26
 Identities = 46/248 (18%), Positives = 84/248 (33%), Gaps = 24/248 (9%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEA 76
           I   IA  LA+ G  +VL G      ++AE      + G        D+        +  
Sbjct: 16  IGLGIAQVLARAGANIVLNGFGDPAPALAEI----ARHGVKAVHHPADLS--DVAQIEAL 69

Query: 77  VDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 134
              A +  G +D  V+     +   ++       + + K++ +N  A +   +     M+
Sbjct: 70  FALAEREFGGVDILVNNAGIQHVAPVEQ---FPLESWDKIIALNLSAVFHGTRLALPGMR 126

Query: 135 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA--- 191
                G I+ + S+ G   G   G AAY A    +  L +   +E     +  N I    
Sbjct: 127 ARN-WGRIINIASVHGL-VG-STGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGW 183

Query: 192 ------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMT 245
                 +              +    L+ E  P   ++  +  L   V++L S+    + 
Sbjct: 184 VLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPE-HLGELVLFLCSEAGSQVR 242

Query: 246 GTTIYVDG 253
           G    VDG
Sbjct: 243 GAAWNVDG 250

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  101 bits (255), Expect = 5e-26
 Identities = 52/240 (21%), Positives = 95/240 (39%), Gaps = 29/240 (12%)

Query: 21  IAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA 80
           +   L   G R+ +    R ++ +A  +        P ++             D      
Sbjct: 44  VVTALRAAGARVAVAD--RAVAGIAADL------HLPGDLR-------EAAYADGLPGAV 88

Query: 81  CQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA 138
              LG LD  V+       G++ +     + ++   + +N  AP+ + +A    M  +  
Sbjct: 89  AAGLGRLDIVVNNAGVISRGRITE---TTDADWSLSLGVNVEAPFRICRAAIPLMAAAG- 144

Query: 139 GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG----- 193
           GG+IV + S  G  R   PG A Y    A++  L +   M+     IR+N +        
Sbjct: 145 GGAIVNVASCWGL-RPG-PGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTP 202

Query: 194 LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 253
           +            +RAV  +    PL R  + + D+A  V++L SD +RY+ G+ + V+G
Sbjct: 203 MLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPE-DIADVVLFLASDAARYLCGSLVEVNG 261

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  102 bits (256), Expect = 5e-26
 Identities = 59/262 (22%), Positives = 102/262 (38%), Gaps = 32/262 (12%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDRE------ 70
             ++ A  LA+ G  ++ +   ++L  V   M  +       E V       R       
Sbjct: 40  QGRSHAITLAREGADIIAIDVCKQLDGVKLPM-STPDDLA--ETVRQVEALGRRIIASQV 96

Query: 71  -----GAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 125
                 A   AVD     LG LD  +       +     ++    ++ ++ +N    W  
Sbjct: 97  DVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWIT 156

Query: 126 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 185
            +     +   K GGSIVF +SI G  RG       Y A    +H L+RT A+E+G   I
Sbjct: 157 ARVAIPHIMAGKRGGSIVFTSSIGG-LRG-AENIGNYIASKHGLHGLMRTMALELGPRNI 214

Query: 186 RVNGIA--------------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAS 231
           RVN +                 +   D     V   +         P+  +++   D+++
Sbjct: 215 RVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPI-PYVEPA-DISN 272

Query: 232 TVIYLISDGSRYMTGTTIYVDG 253
            +++L+SD +RY+TG ++ VDG
Sbjct: 273 AILFLVSDDARYITGVSLPVDG 294

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  101 bits (255), Expect = 6e-26
 Identities = 42/265 (15%), Positives = 94/265 (35%), Gaps = 40/265 (15%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREG----- 71
           + ++ A  LA+ G  + +         V   +  +       E V L  +  R       
Sbjct: 22  MGRSHAVALAEAGADIAICDRCENSDVVGYPL-ATADDLA--ETVALVEKTGRRCISAKV 78

Query: 72  ------AFDEAVDKACQILGNLDAFVH----CYTYEGKMQDPLQVGEDEFKKLVKINFVA 121
                 A +  V +A   LG +D  +            +    +V   ++ +++  N   
Sbjct: 79  DVKDRAALESFVAEAEDTLGGIDIAITNAGIS-----TIALLPEVESAQWDEVIGTNLTG 133

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
            +  + AV   M +    G IV ++S++G         A+Y +    +  L + AA ++ 
Sbjct: 134 TFNTIAAVAPGMIKRN-YGRIVTVSSMLGH-SA-NFAQASYVSSKWGVIGLTKCAAHDLV 190

Query: 182 KHKIRVNGIA-------------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKND 228
            + I VN +A                 ++ +      ++              +L  + +
Sbjct: 191 GYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLKPE-E 249

Query: 229 LASTVIYLISDGSRYMTGTTIYVDG 253
           +   V++L+ + S ++TGT + +D 
Sbjct: 250 VTRAVLFLVDEASSHITGTVLPIDA 274

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  101 bits (255), Expect = 6e-26
 Identities = 52/260 (20%), Positives = 103/260 (39%), Gaps = 21/260 (8%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           K  ++T     I   IA  LAK G  +VL G           +   + G     V+    
Sbjct: 26  KTAVITGSTSGIGLAIARTLAKAGANIVLNG--FGAPDEIRTVTDEVAGLSSGTVLHHPA 83

Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
           +  +     + +       G  D  V+     +  K++D      +++ +++ +N  + +
Sbjct: 84  DMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIED---FPVEQWDRIIAVNLSSSF 140

Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 183
             ++     MK+    G I+ + S  G      P  +AY A    I  L +T A+E+ + 
Sbjct: 141 HTIRGAIPPMKKKG-WGRIINIASAHGL-VA-SPFKSAYVAAKHGIMGLTKTVALEVAES 197

Query: 184 KIRVNGIARG----------LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTV 233
            + VN I  G          +  Q        ++   +++ +  P  +++ V+  +AS  
Sbjct: 198 GVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVE-QVASLA 256

Query: 234 IYLISDGSRYMTGTTIYVDG 253
           +YL  D +  +TGT + +DG
Sbjct: 257 LYLAGDDAAQITGTHVSMDG 276

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  101 bits (253), Expect = 8e-26
 Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 35/241 (14%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFDEAV 77
               +   G ++V     +    ++A ++            V LD+      + A D AV
Sbjct: 23  HVRAMVAEGAKVVFGDILDEEGKAMAAEL------ADAARYVHLDVTQPAQWKAAVDTAV 76

Query: 78  DKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 135
                  G L   V+       G ++D       E+++++ +N    +  ++AV + MKE
Sbjct: 77  TA----FGGLHVLVNNAGILNIGTIED---YALTEWQRILDVNLTGVFLGIRAVVKPMKE 129

Query: 136 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH 195
           +   GSI+ ++SI G   G       Y A   ++  L ++ A+E+G   IRVN I  GL 
Sbjct: 130 AG-RGSIINISSIEGL-AG-TVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLV 186

Query: 196 ---LQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 252
              + D  P  + Q            L R  +   ++++ V+YL SD S Y TG    VD
Sbjct: 187 KTPMTDWVPEDIFQ----------TALGRAAEPV-EVSNLVVYLASDESSYSTGAEFVVD 235

Query: 253 G 253
           G
Sbjct: 236 G 236

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  101 bits (254), Expect = 8e-26
 Identities = 58/261 (22%), Positives = 97/261 (37%), Gaps = 34/261 (13%)

Query: 21  IAFHLAKRGCRLVLV---GNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAF---- 73
            A  LA+ G  ++ V      R           + +     E   L    +R        
Sbjct: 27  HAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLA--ETADLVKGHNRRIVTAEVD 84

Query: 74  -------DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLL 126
                    AVD   + LG LD  V             +  E+++ +++ IN    W  +
Sbjct: 85  VRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTV 144

Query: 127 KAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIR 186
           KA    M     GGSI+ LTS +G  +  YP    Y A    +  L+R   +E+G+H IR
Sbjct: 145 KAGVPHMIAGGRGGSII-LTSSVGGLKA-YPHTGHYVAAKHGVVGLMRAFGVELGQHMIR 202

Query: 187 VNGIA--------------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAST 232
           VN +                 +   D           +  +    P+  W++   D+++ 
Sbjct: 203 VNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLPI-PWVEPI-DISNA 260

Query: 233 VIYLISDGSRYMTGTTIYVDG 253
           V++  SD +RY+TG T+ +D 
Sbjct: 261 VLFFASDEARYITGVTLPIDA 281

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  101 bits (253), Expect = 1e-25
 Identities = 46/242 (19%), Positives = 83/242 (34%), Gaps = 17/242 (7%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           + + IA  L+  G  +V+ G     L + A ++ G    G  V  V  D+   +     F
Sbjct: 45  VGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGR--TGNIVRAVVCDVGDPDQVAALF 102

Query: 74  DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 133
                +       LD  V+            +V  +++  +V  N    +   +   R M
Sbjct: 103 AAVRAE----FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMM 158

Query: 134 KE-SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 192
           K  +  GG I+   SI   +    P +A Y A   +I  L ++ A++   H I    I  
Sbjct: 159 KAQTPRGGRIINNGSISA-QTP-RPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDI 216

Query: 193 GLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG-SRYMTGTTIYV 251
           G        +       V            + ++  +A  V+Y+ S   S  +   T+  
Sbjct: 217 GN---AATDMTARMSTGVLQANGEVAAEPTIPIE-HIAEAVVYMASLPLSANVLTMTVMA 272

Query: 252 DG 253
             
Sbjct: 273 TR 274

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  101 bits (253), Expect = 1e-25
 Identities = 62/296 (20%), Positives = 110/296 (37%), Gaps = 47/296 (15%)

Query: 1   MENQAKRVLLT--SDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPV 58
                   L+T  +    + ++IA  L   G  + L  +  R ++ A  +  +L   +P 
Sbjct: 5   TAPTVPVALVTGAAKR--LGRSIAEGLHAEGYAVCL--HYHRSAAEANALSATLNARRPN 60

Query: 59  EVVGL-----------------DMEEDREGAFDEAVDKACQILGNLDAFVH-----CYTY 96
             + +                            E V       G  D  V+       T 
Sbjct: 61  SAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTP 120

Query: 97  EGKMQD--------PLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA-----GGSIV 143
             +  +          +  E     L   N +AP+FL+KA   R+  + A       SI+
Sbjct: 121 LLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSII 180

Query: 144 FLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA 203
            +   +   + L  G   Y     ++  L R+AA+E+   +IRVNG+  GL +  +    
Sbjct: 181 NMVDAMT-NQPL-LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD---- 234

Query: 204 VGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 259
                  +  R   PL++      +++  VI+L S  ++Y+TGT + VDG  S+TR
Sbjct: 235 DMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 290

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 99.2 bits (248), Expect = 4e-25
 Identities = 53/267 (19%), Positives = 102/267 (38%), Gaps = 32/267 (11%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKG-GQPVEVVG 62
           KRVL+T  S G  I    A   A+ G ++ L G  R+  +  ++ + S++  G       
Sbjct: 8   KRVLITGSSQG--IGLATARLFARAGAKVGLHG--RKAPANIDETIASMRADGGDAAFFA 63

Query: 63  LDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFV 120
            D+   E  +   DE V K     G +D  ++        +   ++ +  +  ++  N  
Sbjct: 64  ADLATSEACQQLVDEFVAK----FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIR 119

Query: 121 APWFLLKAVGRRMKESKA----GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTA 176
           +     K     +  +        +++   SI G   G  PGA  YGA  A +H + +  
Sbjct: 120 SVVMTTKFALPHLAAAAKASGQTSAVISTGSIAG-HTGGGPGAGLYGAAKAFLHNVHKNW 178

Query: 177 AMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKNDLAS 231
                K  +R N ++ G        +     A   +     +    P+ R+   + ++A 
Sbjct: 179 VDFHTKDGVRFNIVSPG-------TVDTAFHADKTQDVRDRISNGIPMGRFGTAE-EMAP 230

Query: 232 TVIYLISDG-SRYMTGTTIYVDGAQSI 257
             ++  S   S Y+TG  + ++G Q  
Sbjct: 231 AFLFFASHLASGYITGQVLDINGGQYK 257

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  100 bits (251), Expect = 4e-25
 Identities = 62/296 (20%), Positives = 109/296 (36%), Gaps = 47/296 (15%)

Query: 1   MENQAKRVLLT--SDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPV 58
                   L+T  +    + ++IA  L   G  + L  +  R ++ A  +  +L   +P 
Sbjct: 42  TAPTVPVALVTGAAKR--LGRSIAEGLHAEGYAVCL--HYHRSAAEANALSATLNARRPN 97

Query: 59  EVVGL-----------------DMEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGK 99
             + +                            E V       G  D  V+     Y   
Sbjct: 98  SAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTP 157

Query: 100 M-----------QDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA-----GGSIV 143
           +               +  E     L   N +AP+FL+KA   R+  + A       SI+
Sbjct: 158 LLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSII 217

Query: 144 FLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA 203
            +   +   + L  G   Y     ++  L R+AA+E+   +IRVNG+  GL +  +    
Sbjct: 218 NMVDAMT-NQPL-LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD---- 271

Query: 204 VGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 259
                  +  R   PL++      +++  VI+L S  ++Y+TGT + VDG  S+TR
Sbjct: 272 DMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 327

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 99.6 bits (249), Expect = 9e-25
 Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 39/265 (14%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDRE------ 70
             +  A  LA+ G  +V +   R+  ++     GS +  +  E V L  E+ R       
Sbjct: 58  QGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQ-GSPEELK--ETVRLVEEQGRRIIARQA 114

Query: 71  -----GAFDEAVDKACQILGNLDAFVH----CYTYEGKMQDPLQVGEDEFKKLVKINFVA 121
                 +    VD+A    G++D  V              + + + + ++  +++ N + 
Sbjct: 115 DVRDLASLQAVVDEALAEFGHIDILVSNVGIS-----NQGEVVSLTDQQWSDILQTNLIG 169

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
            W   +AV   M E   GGS++F++S +G  RG  PG + Y A    +  L+ + A E+G
Sbjct: 170 AWHACRAVLPSMIERGQGGSVIFVSSTVGL-RG-APGQSHYAASKHGVQGLMLSLANEVG 227

Query: 182 KHKIRVNGIA-------------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKND 228
           +H IRVN +                            ++ A    +       W++ + D
Sbjct: 228 RHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPWVEPE-D 286

Query: 229 LASTVIYLISDGSRYMTGTTIYVDG 253
           +++ V +L SD +RY+ G  I VDG
Sbjct: 287 VSNAVAWLASDEARYIHGAAIPVDG 311

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 97.9 bits (245), Expect = 9e-25
 Identities = 53/243 (21%), Positives = 89/243 (36%), Gaps = 28/243 (11%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD--MEEDREGAFDEAV 77
           +   L   G ++     NE     +A ++      G+    V  D   E D         
Sbjct: 22  VVKLLLGEGAKVAFSDINEAAGQQLAAEL------GERSMFVRHDVSSEADWTLVMAAVQ 75

Query: 78  DKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 135
            +    LG L+  V+       G   D      ++F +L+KIN  + +   +     MK 
Sbjct: 76  RR----LGTLNVLVNNAGILLPG---DMETGRLEDFSRLLKINTESVFIGCQQGIAAMK- 127

Query: 136 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH--KIRVNGIARG 193
            + GGSI+ + S+      +    A Y A  A++  L R AA+   K    IRVN I   
Sbjct: 128 -ETGGSIINMASVSSW-LPI-EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPD 184

Query: 194 LH---LQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIY 250
                +          +  V    +     R    +  +A  V++L SD S  M+G+ ++
Sbjct: 185 GIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPE-RIAQLVLFLASDESSVMSGSELH 243

Query: 251 VDG 253
            D 
Sbjct: 244 ADN 246

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 97.8 bits (244), Expect = 1e-24
 Identities = 32/214 (14%), Positives = 62/214 (28%), Gaps = 31/214 (14%)

Query: 60  VVGLDMEEDREGAF------------DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVG 107
            + +D  E+                    ++K       +D FV                
Sbjct: 49  TISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEF 108

Query: 108 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 167
               K ++ +N  + +       + + +   GG  V   +     R    G  AYGA  A
Sbjct: 109 LKSVKGMIDMNLYSAFASAHIGAKLLNQ---GGLFVLTGASAALNRT--SGMIAYGATKA 163

Query: 168 SIHQLVRTAAMEIG--KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDV 225
           + H +++  A E G         GI           +     R        A    W  +
Sbjct: 164 ATHHIIKDLASENGGLPAGSTSLGILPV-------TLDTPTNRKYM---SDANFDDWTPL 213

Query: 226 KNDLASTVI-YLISDGSRYMTGTTIYVDGAQSIT 258
             ++A  +  +  +  SR   G+ +  +    +T
Sbjct: 214 S-EVAEKLFEWSTNSDSRPTNGSLVKFETKSKVT 246

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 97.4 bits (243), Expect = 1e-24
 Identities = 34/242 (14%), Positives = 63/242 (26%), Gaps = 32/242 (13%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK 79
                  R   +  +   E   +S +            V++     E+  +     A   
Sbjct: 23  CVQAFRARNWWVASIDVVENEEASASV----------IVKMTDSFTEQADQVT---AEVG 69

Query: 80  ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAG 139
                  +DA +             +        + K +            + +KE   G
Sbjct: 70  KLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---G 126

Query: 140 GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG--KHKIRVNGIARGLHLQ 197
           G +    +   A  G  PG   YG    ++HQL ++ A +            +       
Sbjct: 127 GLLTLAGAK-AALDG-TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPV---- 180

Query: 198 DEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 257
               +     R        A    W  ++  L  T    I+   R  +G+ I V      
Sbjct: 181 ---TLDTPMNRKS---MPEADFSSWTPLE-FLVETFHDWITGNKRPNSGSLIQVVTTDGK 233

Query: 258 TR 259
           T 
Sbjct: 234 TE 235

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 97.6 bits (244), Expect = 2e-24
 Identities = 52/251 (20%), Positives = 99/251 (39%), Gaps = 32/251 (12%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK--GGQPVEVVGLDM--EEDREGA 72
           I   +    A++G R+ +  N       A+ ++ ++   GG+    +  D+    D    
Sbjct: 38  IGAAVCRLAARQGWRVGV--NYAANREAADAVVAAITESGGE-AVAIPGDVGNAADIAAM 94

Query: 73  FDEAVDKACQILGNLDAFVHCYTYEG--KMQDPL-QVGEDEFKKLVKINFVAPWFLLKAV 129
           F     +     G LD  V+     G       + ++  +  ++++++N           
Sbjct: 95  FSAVDRQ----FGRLDGLVNN---AGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEA 147

Query: 130 GRRM--KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRV 187
            RRM    S  GG+IV ++S+     G       Y A  A+I       A E+    IRV
Sbjct: 148 VRRMSRLYSGQGGAIVNVSSMAA-ILGSATQYVDYAASKAAIDTFTIGLAREVAAEGIRV 206

Query: 188 NGIARG-----LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 242
           N +  G     LH       + G     + +  + P+ R    + ++A  ++YL+S  + 
Sbjct: 207 NAVRPGIIETDLHA------SGGLPDRAREMAPSVPMQRAGMPE-EVADAILYLLSPSAS 259

Query: 243 YMTGTTIYVDG 253
           Y+TG+ + V G
Sbjct: 260 YVTGSILNVSG 270

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 97.7 bits (244), Expect = 3e-24
 Identities = 39/211 (18%), Positives = 62/211 (29%), Gaps = 39/211 (18%)

Query: 70  EGAFDEAVDKACQILGNLD-----AFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
             A    +  A    G LD     A        G       +    F     ++FV    
Sbjct: 83  RAAVSRELANAVAEFGKLDVVVANA--------GICPLGAHLPVQAFADAFDVDFVGVIN 134

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIG---------AERGLYPGAAAYGACAASIHQLVRT 175
            + A    +     G SI+   S+ G         A     PG A Y      +      
Sbjct: 135 TVHAALPYLTS---GASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQ 191

Query: 176 AAMEIGKHKIRVNGIA-------------RGLHLQDEYPIAVGQERAVKLVREAAPLHRW 222
            A ++    IR N I                   + +       +  +      A    +
Sbjct: 192 LAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMPTPY 251

Query: 223 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 253
           ++   D+++ V +L SD SRY+TG    VD 
Sbjct: 252 VEAS-DISNAVCFLASDESRYVTGLQFKVDA 281

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 97.7 bits (244), Expect = 3e-24
 Identities = 55/256 (21%), Positives = 96/256 (37%), Gaps = 30/256 (11%)

Query: 17  ISKNIAFHLAKRGCRLVL--VGNERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGA 72
           I   IA  LA  G  + +  +G+   ++ V  ++ G   G + V  +  D+      +  
Sbjct: 41  IGLGIARALAASGFDIAITGIGDAEGVAPVIAELSG--LGAR-VIFLRADLADLSSHQAT 97

Query: 73  FDEAVDKACQILGNLDAFVHCYTYEGKMQDPL-QVGEDEFKKLVKINFVAPWFLLKAVGR 131
            D  V +     G +D  V+       ++D    +  + F  +V +N     F  +AV +
Sbjct: 98  VDAVVAE----FGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLK 153

Query: 132 RMKESKA--GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNG 189
            M  S A    SI+ +TS+        P    Y    A +    +  A+ + +  I V  
Sbjct: 154 AMLASDARASRSIINITSVSA-VMT-SPERLDYCMSKAGLAAFSQGLALRLAETGIAVFE 211

Query: 190 IARGLHLQDEYPI------AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
           +  G        I      AV  +    +     P+ RW + + D+ + V  L      +
Sbjct: 212 VRPG-------IIRSDMTAAVSGKYDGLIESGLVPMRRWGEPE-DIGNIVAGLAGGQFGF 263

Query: 244 MTGTTIYVDGAQSITR 259
            TG+ I  DG  SI R
Sbjct: 264 ATGSVIQADGGLSIGR 279

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 96.0 bits (240), Expect = 5e-24
 Identities = 54/241 (22%), Positives = 86/241 (35%), Gaps = 19/241 (7%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFD 74
           I + IA   A  G  + +        + A         G+ V  V  D+    D E    
Sbjct: 19  IGRAIAERFAVEGADIAIADLVPAPEAEAA----IRNLGRRVLTVKCDVSQPGDVEAFGK 74

Query: 75  EAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAVGRR 132
           + +       G  D  V+     G        ++  +++KK  +IN  + + + KA    
Sbjct: 75  QVIST----FGRCDILVNN---AGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPG 127

Query: 133 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 192
           MK +   G I+ LTS       +      Y +  A+     R  A ++GK  I VN IA 
Sbjct: 128 MKRNG-WGRIINLTSTTYW-LKI-EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAP 184

Query: 193 GLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 252
            L        +        L      + R      DL     +L SD + ++TG T+ VD
Sbjct: 185 SLVRTATTEASALSAMFDVLPNMLQAIPRLQVPL-DLTGAAAFLASDDASFITGQTLAVD 243

Query: 253 G 253
           G
Sbjct: 244 G 244

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 95.9 bits (239), Expect = 8e-24
 Identities = 40/264 (15%), Positives = 87/264 (32%), Gaps = 29/264 (10%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAK---RGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVE 59
              +LT  S G    + +A  LA+    G  +++   +E  L  + E++ G+ +    V 
Sbjct: 7   AVCVLTGASRG--FGRALAPQLARLLSPGSVMLVSARSESMLRQLKEEL-GAQQPDLKVV 63

Query: 60  VVGLDM--EEDREGAFDEAVDKACQILGNLDAFVH-----CYTYEGKMQDPLQVGEDEFK 112
           +   D+  E   +       +            ++         +G +         E  
Sbjct: 64  LAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNV---NDLAEVN 120

Query: 113 KLVKINFVAPWFLLKAVGRRMKESKA-GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQ 171
               +N  +   L        ++S     ++V ++S + A +  Y G   Y A  A+   
Sbjct: 121 NYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISS-LCALQP-YKGWGLYCAGKAARDM 178

Query: 172 LVRTAAMEIGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKND 228
           L +  A E  +  +RV   A G     +Q               +++       +D    
Sbjct: 179 LYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDC-GT 235

Query: 229 LASTVIYLISDGSRYMTGTTIYVD 252
            A  ++ L+   + + +G  +   
Sbjct: 236 SAQKLLGLLQKDT-FQSGAHVDFY 258

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 95.7 bits (239), Expect = 1e-23
 Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 37/254 (14%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I +      A+ G  LV V   ER L+     +            V  D+   +  E  F
Sbjct: 18  IGRAALDLFAREGASLVAVDREERLLAEAVAAL------EAEAIAVVADVSDPKAVEAVF 71

Query: 74  DEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 131
            EA+++     G L    H     +         +  + ++K++++N    + + +  G 
Sbjct: 72  AEALEE----FGRLHGVAHFAGVAHSALS---WNLPLEAWEKVLRVNLTGSFLVARKAGE 124

Query: 132 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 191
            ++E   GGS+V   S+ G   G   G A Y A    +  L RT A+E+ +  +RVN + 
Sbjct: 125 VLEE---GGSLVLTGSVAGL--G-AFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLL 178

Query: 192 RGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
            GL       I     A     A +    A+PL R    + ++A   ++L+S+ S Y+TG
Sbjct: 179 PGL-------IQTPMTAGLPPWAWEQEVGASPLGRAGRPE-EVAQAALFLLSEESAYITG 230

Query: 247 TTIYVDGAQSITRP 260
             +YVDG +SI  P
Sbjct: 231 QALYVDGGRSIVGP 244

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 95.4 bits (238), Expect = 1e-23
 Identities = 35/250 (14%), Positives = 74/250 (29%), Gaps = 36/250 (14%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK---------GGQPVEVVGLDM-- 65
           I   IA   A+ G  + +     + +    K+ G++          GGQ + +   D+  
Sbjct: 18  IGLAIALRAARDGANVAIAA---KSAVANPKLPGTIHSAAAAVNAAGGQGLALKC-DIRE 73

Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
           E+    A    VD      G +D  V+     +     D        F  + ++N    +
Sbjct: 74  EDQVRAAVAATVDT----FGGIDILVNNASAIWLRGTLD---TPMKRFDLMQQVNARGSF 126

Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 183
              +A    + ++     I+ L          +     Y      +  +    A E G  
Sbjct: 127 VCAQACLPHLLQAP-NPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQ 185

Query: 184 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
            + +N +          P  V    A+ ++               +A     +++  +  
Sbjct: 186 GVAINALW---------PRTVIATDAINML-PGVDAAACRRP-EIMADAAHAVLTREAAG 234

Query: 244 MTGTTIYVDG 253
             G  +  D 
Sbjct: 235 FHGQFLIDDE 244

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 94.5 bits (236), Expect = 2e-23
 Identities = 47/264 (17%), Positives = 98/264 (37%), Gaps = 33/264 (12%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEV 60
           M+   K V +T  G  I    A    + G ++                    +   P   
Sbjct: 3   MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQ------------AFTQEQYPFAT 50

Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKIN 118
             +D+ +       +   +       LDA V+        +M    Q+ ++++++   +N
Sbjct: 51  EVMDVAD--AAQVAQVCQRLLAETERLDALVNAAGIL---RMGATDQLSKEDWQQTFAVN 105

Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAM 178
               + L +    + +  + GG+IV + S          G +AYGA  A++  L  +  +
Sbjct: 106 VGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAH-TP-RIGMSAYGASKAALKSLALSVGL 162

Query: 179 EIGKHKIRVNGIA---------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDL 229
           E+    +R N ++         R L    +           +  +   PL +    + ++
Sbjct: 163 ELAGSGVRCNVVSPGSTDTDMQRTLW-VSDDAEEQRIRGFGEQFKLGIPLGKIARPQ-EI 220

Query: 230 ASTVIYLISDGSRYMTGTTIYVDG 253
           A+T+++L SD + ++T   I VDG
Sbjct: 221 ANTILFLASDLASHITLQDIVVDG 244

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 94.6 bits (236), Expect = 2e-23
 Identities = 49/266 (18%), Positives = 106/266 (39%), Gaps = 34/266 (12%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
           K  L+T  + G  I K IA  L   G  +++ G  E  ++   +++  +      ++ V 
Sbjct: 11  KTALVTGSTAG--IGKAIATSLVAEGANVLINGRREENVNETIKEI-RAQYPDAILQPVV 67

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFV 120
            D+        ++      +    +D  ++     G  +  +   + ++++ KL ++N +
Sbjct: 68  ADL------GTEQGCQDVIEKYPKVDILINN---LGIFEPVEYFDIPDEDWFKLFEVNIM 118

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
           +   L ++  ++M E K  G ++F+ S            A Y A       L R+ A   
Sbjct: 119 SGVRLTRSYLKKMIERK-EGRVIFIASEAAIM--PSQEMAHYSATKTMQLSLSRSLAELT 175

Query: 181 GKHKIRVNGIA-------------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKN 227
               + VN I                L+  ++  I   ++R +K  R  + + R +  + 
Sbjct: 176 TGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPE- 234

Query: 228 DLASTVIYLISDGSRYMTGTTIYVDG 253
           ++A  V +L S  S  + G+ + +DG
Sbjct: 235 EIAHLVTFLSSPLSSAINGSALRIDG 260

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 94.6 bits (236), Expect = 3e-23
 Identities = 54/255 (21%), Positives = 95/255 (37%), Gaps = 22/255 (8%)

Query: 1   MENQAKRV-LLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPV 58
           M    K++ ++T  G  + + +A  LA  G  + L G     L   A ++     G    
Sbjct: 23  MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-----GDD-A 76

Query: 59  EVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVK 116
             V  D+   +     F   V+K     G +D   +             +   ++K++V 
Sbjct: 77  LCVPTDVTDPDSVRALFTATVEK----FGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVD 132

Query: 117 INFVAPWFLLKAVGRRMKESKA-GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRT 175
            N   P+   +   R MK  +  GG I+   SI        P +A Y A   +I  L ++
Sbjct: 133 TNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISA--TSPRPYSAPYTATKHAITGLTKS 190

Query: 176 AAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY 235
            +++   H I    I  G     + P+A   +  V     +  +   +DV   +AS V+Y
Sbjct: 191 TSLDGRVHDIACGQIDIGN---ADTPMAQKMKAGVPQADLSIKVEPVMDVA-HVASAVVY 246

Query: 236 LISD-GSRYMTGTTI 249
           + S      +   TI
Sbjct: 247 MASLPLDANVQFMTI 261

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 93.8 bits (234), Expect = 5e-23
 Identities = 47/255 (18%), Positives = 91/255 (35%), Gaps = 32/255 (12%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I +  A  L  +G ++ LV  N          +    +  +    +  D+  ++     F
Sbjct: 19  IGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQK-TLFIQCDVADQQQLRDTF 77

Query: 74  DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 133
            + VD      G LD  V+     G         E  ++K ++IN V+           M
Sbjct: 78  RKVVDH----FGRLDILVNN---AGVN------NEKNWEKTLQINLVSVISGTYLGLDYM 124

Query: 134 KESKAG--GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAM--EIGKHKIRVNG 189
            +   G  G I+ ++S+ G    +      Y A    I    R+AA+   +    +R+N 
Sbjct: 125 SKQNGGEGGIIINMSSLAG-LMPV-AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNA 182

Query: 190 IARG------LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
           I  G      L   ++             +++    +  LD    +A+ +I LI D +  
Sbjct: 183 ICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPP-LIANGLITLIEDDA-- 239

Query: 244 MTGTTIYVDGAQSIT 258
           + G  + +  ++ I 
Sbjct: 240 LNGAIMKITTSKGIH 254

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 93.8 bits (234), Expect = 5e-23
 Identities = 49/265 (18%), Positives = 106/265 (40%), Gaps = 35/265 (13%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEV 60
           M NQ K V++T     I   +      R  R+V         S+             +  
Sbjct: 24  MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATS-----RSIKPS------ADPDIHT 72

Query: 61  VGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVK 116
           V  D+   E  +    E +++     G +D+ V+     G        ++ ++++   + 
Sbjct: 73  VAGDISKPETADRIVREGIER----FGRIDSLVNN---AGVFLAKPFVEMTQEDYDHNLG 125

Query: 117 INFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACA--ASIHQLVR 174
           +N    + + +     M +    G IV +T+ +  ++ +  G  +  A      ++ + R
Sbjct: 126 VNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLV-DQPM-VGMPSALASLTKGGLNAVTR 182

Query: 175 TAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI 234
           + AME  +  +RVN ++ G+     +P           +    P+ R  +++ D+   V+
Sbjct: 183 SLAMEFSRSGVRVNAVSPGVIKTPMHP-----AETHSTLAGLHPVGRMGEIR-DVVDAVL 236

Query: 235 YLISDGSRYMTGTTIYVDGAQSITR 259
           YL  + + ++TG  ++VDG Q+  R
Sbjct: 237 YL--EHAGFITGEILHVDGGQNAGR 259

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 92.9 bits (232), Expect = 6e-23
 Identities = 54/248 (21%), Positives = 92/248 (37%), Gaps = 34/248 (13%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I K IA  LA  G  +++   N     + A  +      G+    +  D+      +  F
Sbjct: 18  IGKAIAARLAADGATVIVSDINAEGAKAAAASI------GKKARAIAADISDPGSVKALF 71

Query: 74  DEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAVGR 131
            E         G +D  V+       +       V  D ++K++ +N    + + +A   
Sbjct: 72  AEIQAL----TGGIDILVNN---ASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTD 124

Query: 132 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 191
           +M+ +   G ++ + S      G  P  AAY A    +    R  A E+GK+ I  N + 
Sbjct: 125 QMRAAGKAGRVISIASNTFF-AG-TPNMAAYVAAKGGVIGFTRALATELGKYNITANAVT 182

Query: 192 RGLHLQDEYPI------AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMT 245
            GL       I      A     A   V     +      +  +A  V +L SD +R++T
Sbjct: 183 PGL-------IESDGVKASPHNEAFGFVEMLQAMKGKGQPE-HIADVVSFLASDDARWIT 234

Query: 246 GTTIYVDG 253
           G T+ VD 
Sbjct: 235 GQTLNVDA 242

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 93.8 bits (234), Expect = 8e-23
 Identities = 64/265 (24%), Positives = 107/265 (40%), Gaps = 33/265 (12%)

Query: 1   MENQAKRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQP 57
            +  A+ VL+T  + G  I + IA   A+ G  + +   + R LSSV  ++     G   
Sbjct: 37  FDLSARSVLVTGGTKG--IGRGIATVFARAGANVAVAARSPRELSSVTAELGE--LGAGN 92

Query: 58  VEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKK 113
           V  V LD+        A    VD      G LD          E ++     +  ++  +
Sbjct: 93  VIGVRLDVSDPGSCADAARTVVDA----FGALDVVCANAGIFPEARL---DTMTPEQLSE 145

Query: 114 LVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLV 173
           ++ +N     + ++A    +  S   G ++  +SI G   G YPG + YGA  A+    +
Sbjct: 146 VLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVTG-YPGWSHYGASKAAQLGFM 203

Query: 174 RTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKND 228
           RTAA+E+    + VN I  G        I         E  +  +  + P+        D
Sbjct: 204 RTAAIELAPRGVTVNAILPGN-------ILTEGLVDMGEEYISGMARSIPMGMLGSPV-D 255

Query: 229 LASTVIYLISDGSRYMTGTTIYVDG 253
           +     +L +D + Y+TG  I VDG
Sbjct: 256 IGHLAAFLATDEAGYITGQAIVVDG 280

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 92.0 bits (229), Expect = 1e-22
 Identities = 29/259 (11%), Positives = 68/259 (26%), Gaps = 33/259 (12%)

Query: 4   QAKRVLLT-SDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVG 62
            + +V++    G  +   I     K G  ++ +      +  A+             +V 
Sbjct: 2   SSGKVIVYGGKGA-LGSAILEFFKKNGYTVLNID--LSANDQADS----------NILVD 48

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
            +     +         +      +D                +        ++K +  + 
Sbjct: 49  GNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSS 108

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG- 181
               K     +K    GG +    +   A     P    YG   A++H L  + A +   
Sbjct: 109 AIAAKLATTHLKP---GGLLQLTGAA-AAMGPT-PSMIGYGMAKAAVHHLTSSLAAKDSG 163

Query: 182 -KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG 240
                 V  I           +     R        A    W  +   ++  ++   ++ 
Sbjct: 164 LPDNSAVLTIMPV-------TLDTPMNRK---WMPNADHSSWTPLS-FISEHLLKWTTET 212

Query: 241 -SRYMTGTTIYVDGAQSIT 258
            SR  +G  + +      +
Sbjct: 213 SSRPSSGALLKITTENGTS 231

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 92.0 bits (229), Expect = 2e-22
 Identities = 37/255 (14%), Positives = 74/255 (29%), Gaps = 19/255 (7%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEV 60
           M+   K V+  +    I  + +  L KR  +  ++ + R  +  A   + ++     +  
Sbjct: 1   MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILD-RVENPTALAELKAINPKVNITF 59

Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFV 120
              D+         + + K    L  +D  ++     G + D       + ++ + INF 
Sbjct: 60  HTYDVTVPVA-ESKKLLKKIFDQLKTVDILING---AGILDD------HQIERTIAINFT 109

Query: 121 APWFLLKAVGRRMKESKAG--GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAM 178
                  A+     + K G  G I  + S+ G           Y A  A++     + A 
Sbjct: 110 GLVNTTTAILDFWDKRKGGPGGIIANICSVTG-FNA-IHQVPVYSASKAAVVSFTNSLAK 167

Query: 179 EIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 238
                 +    I  G+                  V E    H     +       +  I 
Sbjct: 168 LAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSE-QCGQNFVKAIE 226

Query: 239 DGSRYMTGTTIYVDG 253
                  G    +D 
Sbjct: 227 ANK---NGAIWKLDL 238

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score = 90.3 bits (225), Expect = 7e-22
 Identities = 59/261 (22%), Positives = 103/261 (39%), Gaps = 32/261 (12%)

Query: 1   MENQAKRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQP 57
           +E Q    ++T  S G  I   IA  LA  G R+VL+  +++ L  V +++M S K  Q 
Sbjct: 3   LEKQKGLAIITGASQG--IGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQE 60

Query: 58  VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVG-EDEFKKLVK 116
             V+ LD+  D     D  +    Q  G +D  V+         D       D F+K+++
Sbjct: 61  PIVLPLDIT-DCT-KADTEIKDIHQKYGAVDILVNA---AAMFMDGSLSEPVDNFRKIME 115

Query: 117 INFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTA 176
           IN +A + +LK V   MK  K G  I  + S     +  +     YG+   ++  L  + 
Sbjct: 116 INVIAQYGILKTVTEIMKVQKNG-YIFNVASRAA--KYGFADGGIYGSTKFALLGLAESL 172

Query: 177 AMEIGKHKIRVNGIARGLHLQDEYPIAVG---QERAVKLVREAAPLHRWLDVKNDLASTV 233
             E+    IRV  +          P  V     ++A    ++   +       +DL +T+
Sbjct: 173 YRELAPLGIRVTTLC---------PGWVNTDMAKKAGTPFKDEEMIQ-----PDDLLNTI 218

Query: 234 IYLISDGSR-YMTGTTIYVDG 253
             L++      +      +  
Sbjct: 219 RCLLNLSENVCIKDIVFEMKK 239

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 89.5 bits (223), Expect = 2e-21
 Identities = 56/261 (21%), Positives = 102/261 (39%), Gaps = 34/261 (13%)

Query: 6   KRVLLTSDGDE-ISKNIAFHLAKRGCRLVLV--GNERRLSSVAEKMMGSLK--GGQPVEV 60
           ++ L+T  GD  I +  A   A+ G  + +     E      A+++   ++  G + V +
Sbjct: 50  RKALVTG-GDSGIGRAAAIAYAREGADVAINYLPAEEE---DAQQVKALIEECGRKAVLL 105

Query: 61  VG-LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINF 119
            G L  E        +A +     LG LD        +  + +   +  ++F++   +N 
Sbjct: 106 PGDLSDESFARSLVHKAREA----LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNV 161

Query: 120 VAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME 179
            A +++ +     + +   G SI+  +SI  A +   P    Y A  A+I    R  A +
Sbjct: 162 FALFWITQEAIPLLPK---GASIITTSSIQ-AYQP-SPHLLDYAATKAAILNYSRGLAKQ 216

Query: 180 IGKHKIRVNGIARGLHLQDEYPI-------AVGQERAVKLVREAAPLHRWLDVKNDLAST 232
           + +  IRVN +A G       PI           +  +    +  P+ R      +LA  
Sbjct: 217 VAEKGIRVNIVAPG-------PIWTALQISGGQTQDKIPQFGQQTPMKRAGQP-AELAPV 268

Query: 233 VIYLISDGSRYMTGTTIYVDG 253
            +YL S  S Y+T     V G
Sbjct: 269 YVYLASQESSYVTAEVHGVCG 289

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 88.4 bits (220), Expect = 3e-21
 Identities = 34/264 (12%), Positives = 84/264 (31%), Gaps = 49/264 (18%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
             +++T    G  + + +   L +RG ++ ++G   +RL      +      G  V  + 
Sbjct: 4   GHIIVTGAGSG--LGRALTIGLVERGHQVSMMGRRYQRLQQQELLL------GNAVIGIV 55

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFV 120
            D+        D A   A +  G  +  +HC      G +        ++ +++++ N V
Sbjct: 56  ADLA--HHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGV---YTAEQIRRVMESNLV 110

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
           +   + +   R + E   GG +  + S     +      + Y A    +   + +   E+
Sbjct: 111 STILVAQQTVRLIGER--GGVLANVLSSAA--QVGKANESLYCASKWGMRGFLESLRAEL 166

Query: 181 GKHKIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTV 233
               +R+  +           +     P                            A+ +
Sbjct: 167 KDSPLRLVNLYPSGIRSEFWDNTDHVDPSGFMTPEDA-------------------AAYM 207

Query: 234 IYLI-SDGSRYMTGTTIYVDGAQS 256
           +  + +  S ++T   I  +    
Sbjct: 208 LDALEARSSCHVTDLFIGRNEGHH 231

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 88.1 bits (219), Expect = 5e-21
 Identities = 33/241 (13%), Positives = 74/241 (30%), Gaps = 21/241 (8%)

Query: 21  IAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA 80
           +   LA+ G  ++ +   R  + +   +         V  V        +G    A    
Sbjct: 17  LKELLARAGHTVIGID--RGQADIEADLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVGV 74

Query: 81  CQILGNLDAFVHCYTYEGKMQDPL-QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAG 139
                 L   V+ +     +      +   +    V +  +A      A    ++     
Sbjct: 75  TAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAML-A 133

Query: 140 GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL----- 194
           G       +            AY     ++  L R   ++     +R+N +A G      
Sbjct: 134 GDEARAIELAEQ---QGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPL 190

Query: 195 --HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 252
               + +              R  APL R  + + ++A  + +L+   + ++ G+ ++VD
Sbjct: 191 LQASKAD------PRYGESTRRFVAPLGRGSEPR-EVAEAIAFLLGPQASFIHGSVLFVD 243

Query: 253 G 253
           G
Sbjct: 244 G 244

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 88.9 bits (221), Expect = 5e-21
 Identities = 41/250 (16%), Positives = 79/250 (31%), Gaps = 35/250 (14%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK---------GGQPVEVVGLDM-- 65
           I   IA  +A  G  + LV    + +    K+ G++          GGQ + +VG D+  
Sbjct: 21  IGLAIAKRVAADGANVALVA---KSAEPHPKLPGTIYTAAKEIEEAGGQALPIVG-DIRD 76

Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
            +    A  + V++     G +D  V+       G +++   V    F  +  I     +
Sbjct: 77  GDAVAAAVAKTVEQ----FGGIDICVNNASAINLGSIEE---VPLKRFDLMNGIQVRGTY 129

Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 183
            + ++    MK       I+ L+  I      +     Y      +       A E+   
Sbjct: 130 AVSQSCIPHMKGRD-NPHILTLSPPIR-LEPKWLRPTPYMMAKYGMTLCALGIAEELRDA 187

Query: 184 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
            I  N +     +               L+     + R    +   A     +++  S Y
Sbjct: 188 GIASNTLWPRTTVATAAVQN--------LLGGDEAMARSRKPE-VYADAAYVVLNKPSSY 238

Query: 244 MTGTTIYVDG 253
              T +  D 
Sbjct: 239 TGNTLLCEDV 248

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 87.6 bits (218), Expect = 6e-21
 Identities = 56/253 (22%), Positives = 101/253 (39%), Gaps = 35/253 (13%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
           K VL+   S G  I + +A  L++ G  + +   NE  L                   V 
Sbjct: 20  KGVLVLAASRG--IGRAVADVLSQEGAEVTICARNEELLKRSGH------------RYVV 65

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFV 120
            D+ +D +  F++        +  +D  V      G  K     ++  ++FK+ +   F+
Sbjct: 66  CDLRKDLDLLFEK--------VKEVDILV---LNAGGPKAGFFDELTNEDFKEAIDSLFL 114

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
               +++     MKE    G IV +TS       +        +   ++   ++T + E+
Sbjct: 115 NMIKIVRNYLPAMKEKG-WGRIVAITSFSVIS-PI-ENLYTSNSARMALTGFLKTLSFEV 171

Query: 181 GKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG 240
             + I VN +A G    +     +  E   K V    P+ R    + ++AS V +L S+ 
Sbjct: 172 APYGITVNCVAPGWTETERV-KELLSEEKKKQVESQIPMRRMAKPE-EIASVVAFLCSEK 229

Query: 241 SRYMTGTTIYVDG 253
           + Y+TG TI VDG
Sbjct: 230 ASYLTGQTIVVDG 242

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 88.1 bits (219), Expect = 7e-21
 Identities = 48/252 (19%), Positives = 95/252 (37%), Gaps = 28/252 (11%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I   +A  LA RG  +     + + +S+  + +  +   G  V+    D+   ++   A 
Sbjct: 36  IGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA---GHDVDGSSCDVTSTDEVHAAV 92

Query: 74  DEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAVGR 131
             AV++     G +   V+     G+        + +  +  ++  N    + + + V R
Sbjct: 93  AAAVER----FGPIGILVNS---AGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLR 145

Query: 132 RMKESKAG-GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 190
                +AG G IV + S  G  +G    AA Y A    +    ++   E+ K  I VN +
Sbjct: 146 AGGMREAGWGRIVNIASTGGK-QG-VMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAV 203

Query: 191 A---------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 241
                       +         V ++   +      PL R+   + ++A  V YL++D +
Sbjct: 204 CPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPE-EVAGLVGYLVTDAA 262

Query: 242 RYMTGTTIYVDG 253
             +T   + V G
Sbjct: 263 ASITAQALNVCG 274

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 87.2 bits (217), Expect = 2e-20
 Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 19/186 (10%)

Query: 74  DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 133
            + V +  + LG+L+  V+    +   Q    +  ++ +K  +IN  + + + KA    +
Sbjct: 113 KDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHL 172

Query: 134 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG 193
           K+   G  I+   SI+ A  G       Y A   +I    R+ +  + +  IRVNG+A G
Sbjct: 173 KQ---GDVIINTASIV-AYEG-NETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPG 227

Query: 194 LHLQDEYPI------AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGT 247
                  PI      +   E+ V       P+ R      +LA   +YL S  S Y+TG 
Sbjct: 228 -------PIWTPLIPSSFDEKKVSQFGSNVPMQR-PGQPYELAPAYVYLASSDSSYVTGQ 279

Query: 248 TIYVDG 253
            I+V+G
Sbjct: 280 MIHVNG 285

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 86.1 bits (214), Expect = 3e-20
 Identities = 56/268 (20%), Positives = 97/268 (36%), Gaps = 51/268 (19%)

Query: 21  IAFHLAKR----GCRLVL--VGNERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGA 72
           IAFH+A+     G +LVL      R +  + +++           ++ LD+  EE     
Sbjct: 21  IAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL------PAKAPLLELDVQNEEHLASL 74

Query: 73  FDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGE------DEFKKLVKI---NFVAPW 123
               V +A      LD  VH   +  +    + +         +  K + I   ++ +  
Sbjct: 75  AGR-VTEAIGAGNKLDGVVHSIGFMPQ--TGMGINPFFDAPYADVSKGIHISAYSYAS-- 129

Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY---GACAASIHQLVRTAAMEI 180
            + KA+   M     GGSIV +       R + P    Y       +++  + R  A E 
Sbjct: 130 -MAKALLPIMNP---GGSIVGMD--FDPSRAM-PA---YNWMTVAKSALESVNRFVAREA 179

Query: 181 GKHKIRVNGI---------ARGLHLQDEYPIAVGQERAV-KLVREAAPLHRWLDVKNDLA 230
           GK+ +R N +            +        A  Q + + +   + AP+   +     +A
Sbjct: 180 GKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVA 239

Query: 231 STVIYLISDGSRYMTGTTIYVDGAQSIT 258
            TV  L+SD     TG  IY DG     
Sbjct: 240 KTVCALLSDWLPATTGDIIYADGGAHTQ 267

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 86.8 bits (215), Expect = 5e-20
 Identities = 44/250 (17%), Positives = 84/250 (33%), Gaps = 37/250 (14%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK---------GGQPVEVVGLDM-- 65
           I K IA   AK G  +V+     + +    K++G++          GG+ +  +  D+  
Sbjct: 57  IGKAIALKAAKDGANIVIAA---KTAQPHPKLLGTIYTAAEEIEAVGGKALPCIV-DVRD 112

Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
           E+    A ++A+ K     G +D  V+           D           ++ +N    +
Sbjct: 113 EQQISAAVEKAIKK----FGGIDILVNNASAISLTNTLD---TPTKRLDLMMNVNTRGTY 165

Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 183
              KA    +K+SK    I+ ++  +      +    AY      +   V   A E  K 
Sbjct: 166 LASKACIPYLKKSK-VAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEF-KG 223

Query: 184 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
           +I VN +     +       +G        R+            D+ +   Y I    + 
Sbjct: 224 EIAVNALWPKTAIHTAAMDMLGGPGIESQCRKV-----------DIIADAAYSIFQKPKS 272

Query: 244 MTGTTIYVDG 253
            TG  +  + 
Sbjct: 273 FTGNFVIDEN 282

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 85.1 bits (211), Expect = 7e-20
 Identities = 46/240 (19%), Positives = 81/240 (33%), Gaps = 65/240 (27%)

Query: 59  EVVGLDM-----------EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVG 107
           ++VG+D+            E R+ A  + + K       +D  V C    G     L   
Sbjct: 27  QIVGIDIRDAEVIADLSTAEGRKQAIADVLAKC---SKGMDGLVLC---AG-----LGPQ 75

Query: 108 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG----------------- 150
                 +V +N+     L+ A    +K+     + V ++S+                   
Sbjct: 76  TKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAG 134

Query: 151 ---------AERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL------- 194
                       G   G  AY     ++   VR  A   G+  +R+N IA G        
Sbjct: 135 EEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQ 194

Query: 195 -HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 253
             LQD             + +   P+ R  +   ++AS + +L+S  + Y+ G  I +DG
Sbjct: 195 AGLQDP-------RYGESIAKFVPPMGRRAEPS-EMASVIAFLMSPAASYVHGAQIVIDG 246

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 84.9 bits (211), Expect = 8e-20
 Identities = 54/257 (21%), Positives = 96/257 (37%), Gaps = 42/257 (16%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAE--KMMGSLKGGQPVEVVGLDM----EEDR 69
           I + ++  LA  G  +     +              GS +G                   
Sbjct: 19  IGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAA 78

Query: 70  EGAFDEAVDKACQILGNL--------DAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVA 121
               ++      +    +        D F+        M       ED++ K++ +N   
Sbjct: 79  RCLLEQVQACFSRPPSVVVSCAGITQDEFLL------HMS------EDDWDKVIAVNLKG 126

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
            + + +A  + +  +   GSI+ ++SI+G   G   G   Y A  A +  L +TAA E+G
Sbjct: 127 TFLVTQAAAQALVSNGCRGSIINISSIVGK-VG-NVGQTNYAASKAGVIGLTQTAARELG 184

Query: 182 KHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL 236
           +H IR N +  G        I         ++ V  + E  P+    D + D+A  V +L
Sbjct: 185 RHGIRCNSVLPGF-------IATPMTQKVPQKVVDKITEMIPMGHLGDPE-DVADVVAFL 236

Query: 237 ISDGSRYMTGTTIYVDG 253
            S+ S Y+TGT++ V G
Sbjct: 237 ASEDSGYITGTSVEVTG 253

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 84.6 bits (210), Expect = 1e-19
 Identities = 55/237 (23%), Positives = 96/237 (40%), Gaps = 26/237 (10%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDE 75
           I   IA  L   G R+VL   +  +L +V  +++    GG+  E    D+    + A   
Sbjct: 41  IGAAIARKLGSLGARVVLTARDVEKLRAVEREIVA--AGGE-AESHACDLS-HSD-AIAA 95

Query: 76  AVDKACQILGNLDAFVHCYTYEGKMQDP---LQVGEDEFKKLVKINFVAPWFLLKAVGRR 132
                    G  D  V+     G          +   E+  L+ +N  AP+ LL+A    
Sbjct: 96  FATGVLAAHGRCDVLVNN---AGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPA 152

Query: 133 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 192
           M  +K  G I+ ++S+ G         AAY A    ++ L+ +AA E+ +H++RV+ +A 
Sbjct: 153 MIAAK-RGHIINISSLAGK-NP-VADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVA- 208

Query: 193 GLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTI 249
                   P +V  E  V L  + + L   ++   D+A  V  L +   +      +
Sbjct: 209 --------PGSVRTEFGVGLSAKKSALGA-IEPD-DIADVVALLATQADQSFISEVL 255

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 84.6 bits (210), Expect = 2e-19
 Identities = 55/269 (20%), Positives = 100/269 (37%), Gaps = 29/269 (10%)

Query: 1   MENQAKRV-LLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPV 58
           M  Q   V L+T     I   IA  L K G R+ +    E  L +  +++  +   G   
Sbjct: 17  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA---GVEA 73

Query: 59  EVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKL 114
           +    D+    + E      V++     G +D  V+     G+       ++ ++ +  +
Sbjct: 74  DGRTCDVRSVPEIEALVAAVVER----YGPVDVLVNN---AGRPGGGATAELADELWLDV 126

Query: 115 VKINFVAPWFLLKAVGRRMKESKAG-GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLV 173
           V+ N    + + K V +     + G G IV + S  G  +G    AA Y A    +    
Sbjct: 127 VETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGK-QG-VVHAAPYSASKHGVVGFT 184

Query: 174 RTAAMEIGKHKIRVNGIA---------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLD 224
           +   +E+ +  I VN +            +         V  E A   +    P+ R++ 
Sbjct: 185 KALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQ 244

Query: 225 VKNDLASTVIYLISDGSRYMTGTTIYVDG 253
              ++A  V YLI  G+  +T   + V G
Sbjct: 245 PS-EVAEMVAYLIGPGAAAVTAQALNVCG 272

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 84.3 bits (209), Expect = 2e-19
 Identities = 54/253 (21%), Positives = 97/253 (38%), Gaps = 31/253 (12%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK 79
               L   G  +V+      +  ++A+++      G   E V  ++    E +   A++ 
Sbjct: 46  TVRRLHADGLGVVIADLAAEKGKALADEL------GNRAEFVSTNVTS--EDSVLAAIEA 97

Query: 80  ACQILGNLDAFVHC--YTYEGKM--QDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 135
           A Q+     A V    +    ++  +D        F K + +     + + + V   +  
Sbjct: 98  ANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAA 157

Query: 136 SKA-----GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 190
           ++       G++V   SI G E     G  AY A  A +  L   AA ++    IRVN I
Sbjct: 158 AEPRENGERGALVLTASIAGYEGQ--IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTI 215

Query: 191 ARGLHLQDEYPI-AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTI 249
           A G     + PI     E A+       P  + L   ++ A    +L+++G  Y+ G  +
Sbjct: 216 APGTM---KTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAAAFLLTNG--YINGEVM 270

Query: 250 YVDGAQSITRPRM 262
            +DGAQ     R 
Sbjct: 271 RLDGAQ-----RF 278

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 83.8 bits (208), Expect = 2e-19
 Identities = 43/247 (17%), Positives = 85/247 (34%), Gaps = 22/247 (8%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I + IA  L K G  + + G +   L  VA++      GGQ    V  D   E +    F
Sbjct: 17  IGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQS--LGGQ-CVPVVCDSSQESEVRSLF 73

Query: 74  DEAVDKACQILGNLD-----AFVHCYTYEGKMQDPL-QVGEDEFKKLVKINFVAPWFLLK 127
           ++   +     G LD     A+    T          +     +  +  +     +F   
Sbjct: 74  EQVDREQ---QGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSV 130

Query: 128 AVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRV 187
              R M  +   G IV ++S    +   Y     YG   A+  +L    A E+ +H +  
Sbjct: 131 YGARLMVPAG-QGLIVVISSPGSLQ---YMFNVPYGVGKAACDKLAADCAHELRRHGVSC 186

Query: 188 NGIARGLHLQDEYPIAVGQERAVK--LVREAAPLHRWLDVKNDLASTVIYLISD-GSRYM 244
             +  G+   +     + +E  ++  ++++        +        V+ L +D     +
Sbjct: 187 VSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATDPNILSL 246

Query: 245 TGTTIYV 251
           +G  +  
Sbjct: 247 SGKVLPS 253

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 82.5 bits (205), Expect = 4e-19
 Identities = 64/248 (25%), Positives = 110/248 (44%), Gaps = 31/248 (12%)

Query: 17  ISKNIAFHLAKRGCRLVL--VGNERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGA 72
           I + IA  LA+ G  L +    N  +   VAE+     +G   V V+G ++   E     
Sbjct: 13  IGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARR--RGSPLVAVLGANLLEAEAATAL 70

Query: 73  FDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKKLVKINFVAPWFLLKAVG 130
             +A +     LG LD  V+     G  +D L V   +++++ +++ N  A +   +   
Sbjct: 71  VHQAAEV----LGGLDTLVNN---AGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAV 123

Query: 131 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 190
           + M +++ G  IV +TS++G   G  PG A Y A  A +    R  A E  +  I VN +
Sbjct: 124 KLMMKARFG-RIVNITSVVGI-LG-NPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAV 180

Query: 191 ARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMT 245
           A G        I         +   +   +  P  R+   + ++A  V +L+S+ + Y+T
Sbjct: 181 APGF-------IETEMTERLPQEVKEAYLKQIPAGRFGRPE-EVAEAVAFLVSEKAGYIT 232

Query: 246 GTTIYVDG 253
           G T+ VDG
Sbjct: 233 GQTLCVDG 240

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 82.2 bits (204), Expect = 6e-19
 Identities = 75/263 (28%), Positives = 111/263 (42%), Gaps = 37/263 (14%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVE 59
           M  + K VL+T     I +      AK G RLV     E  L   AE +           
Sbjct: 1   MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGA--------H 52

Query: 60  VVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKKLV 115
            V +D+      E  F EA+      LG LD  VH     G  +D        ++++ ++
Sbjct: 53  PVVMDVADPASVERGFAEALAH----LGRLDGVVHY---AGITRDNFHWKMPLEDWELVL 105

Query: 116 KINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRT 175
           ++N    + + KA    M+E    GSIV   S +    G   G A Y A  A +  L RT
Sbjct: 106 RVNLTGSFLVAKAASEAMREKN-PGSIVLTASRVYL--G-NLGQANYAASMAGVVGLTRT 161

Query: 176 AAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKNDLA 230
            A+E+G+  IRVN +A G        I     A   E+  +    A PL R      ++A
Sbjct: 162 LALELGRWGIRVNTLAPGF-------IETRMTAKVPEKVREKAIAATPLGR-AGKPLEVA 213

Query: 231 STVIYLISDGSRYMTGTTIYVDG 253
              ++L+SD S ++TG  ++VDG
Sbjct: 214 YAALFLLSDESSFITGQVLFVDG 236

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 81.8 bits (203), Expect = 7e-19
 Identities = 52/243 (21%), Positives = 97/243 (39%), Gaps = 36/243 (14%)

Query: 1   MENQAKRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQP 57
           ME     VL+T  S G  I +  A  L  +G R+ L+  +E+RL ++A ++ G       
Sbjct: 1   MEGMKGAVLITGASRG--IGEATARLLHAKGYRVGLMARDEKRLQALAAELEG------- 51

Query: 58  VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ-DPLQVGE-DEFKKLV 115
              +  D+  +    +  AV    +  G L A V+     G     P+     +E++ ++
Sbjct: 52  ALPLPGDVR-EEG-DWARAVAAMEEAFGELSALVNN---AGVGVMKPVHELTLEEWRLVL 106

Query: 116 KINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRT 175
             N    +  ++     +     GG+IV + S+ G  +  + G AAY A    +  L   
Sbjct: 107 DTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAG--KNPFKGGAAYNASKFGLLGLAGA 163

Query: 176 AAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY 235
           A +++ +  +RV  +          P +V    A     +A  L        D+A  V++
Sbjct: 164 AMLDLREANVRVVNVL---------PGSVDTGFAGNTPGQAWKLK-----PEDVAQAVLF 209

Query: 236 LIS 238
            + 
Sbjct: 210 ALE 212

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 81.8 bits (203), Expect = 1e-18
 Identities = 61/258 (23%), Positives = 112/258 (43%), Gaps = 34/258 (13%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
           ++ L+T  + G  I + IA     +G  + L G  E +L  +A  +      G+ V V  
Sbjct: 28  RKALVTGATGG--IGEAIARCFHAQGAIVGLHGTREDKLKEIAADL------GKDVFVFS 79

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKKLVKINFV 120
            ++ +    +  +  + A + +  +D  V+     G  +D L V   + ++  ++ +N  
Sbjct: 80  ANLSD--RKSIKQLAEVAEREMEGIDILVNN---AGITRDGLFVRMQDQDWDDVLAVNLT 134

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
           A   L + +   M   + G  I+ +TSI+G   G  PG   Y A  A +    +  A EI
Sbjct: 135 AASTLTRELIHSMMRRRYG-RIINITSIVGV-VG-NPGQTNYCAAKAGLIGFSKALAQEI 191

Query: 181 GKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKNDLASTVIY 235
               I VN IA G        I         E+  + +    P+ R + +  ++A   +Y
Sbjct: 192 ASRNITVNCIAPGF-------IKSAMTDKLNEKQKEAIMAMIPMKR-MGIGEEIAFATVY 243

Query: 236 LISDGSRYMTGTTIYVDG 253
           L SD + Y+TG T++++G
Sbjct: 244 LASDEAAYLTGQTLHING 261

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 81.4 bits (202), Expect = 1e-18
 Identities = 57/263 (21%), Positives = 106/263 (40%), Gaps = 31/263 (11%)

Query: 1   MENQAKRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQP 57
           M    K  L+T  S G  I   +A  LA +G  +V    ++         M      G  
Sbjct: 1   MSLNEKVALVTGASRG--IGFEVAHALASKGATVVGTATSQASAEKFENSMKEK---GFK 55

Query: 58  VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKKLV 115
              + L++ +    +      +       +D  V+     G  +D L +   EDE++ ++
Sbjct: 56  ARGLVLNISD--IESIQNFFAEIKAENLAIDILVNN---AGITRDNLMMRMSEDEWQSVI 110

Query: 116 KINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRT 175
             N  + + + K   R M + + G  I+ + S++G+  G  PG   Y A  A +    ++
Sbjct: 111 NTNLSSIFRMSKECVRGMMKKRWG-RIISIGSVVGS-AG-NPGQTNYCAAKAGVIGFSKS 167

Query: 176 AAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKNDLA 230
            A E+    I VN +A G        I         +     +    P  + +    D+A
Sbjct: 168 LAYEVASRNITVNVVAPGF-------IATDMTDKLTDEQKSFIATKIPSGQ-IGEPKDIA 219

Query: 231 STVIYLISDGSRYMTGTTIYVDG 253
           + V +L S+ ++Y+TG T++V+G
Sbjct: 220 AAVAFLASEEAKYITGQTLHVNG 242

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 81.5 bits (202), Expect = 1e-18
 Identities = 43/262 (16%), Positives = 82/262 (31%), Gaps = 51/262 (19%)

Query: 17  ISKNIAFHLAKRGCR-------LVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--E 66
           I + IA   A+           LVL       L  ++ +     +G    + +  D+   
Sbjct: 14  IGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRA--EGAL-TDTITADISDM 70

Query: 67  EDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWF 124
            D        V++     G++D  V+     G  +      + E++F   +  N    +F
Sbjct: 71  ADVRRLTTHIVER----YGHIDCLVNN---AGVGRFGALSDLTEEDFDYTMNTNLKGTFF 123

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           L +A+   M+     G I F+TS+       +  ++ Y         LV T  +   K  
Sbjct: 124 LTQALFALMERQH-SGHIFFITSVAA--TKAFRHSSIYCMSKFGQRGLVETMRLYARKCN 180

Query: 185 IRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI 237
           +R+  +  G         + DE    +     +                   A+ V+   
Sbjct: 181 VRITDVQPGAVYTPMWGKVDDEMQALMMMPEDI-------------------AAPVVQAY 221

Query: 238 SDGSRYMTGTTIYVDGAQSITR 259
              SR +    I    +  I  
Sbjct: 222 LQPSRTVVEEIILRPTSGDIQD 243

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 81.0 bits (201), Expect = 2e-18
 Identities = 72/265 (27%), Positives = 115/265 (43%), Gaps = 34/265 (12%)

Query: 1   MENQAKRVLLT--SDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKG-GQP 57
           M+ + K  ++T  S G  + K IA+ L   G  +VL  N    S+  +      K  G  
Sbjct: 1   MQLKGKTAIVTGSSRG--LGKAIAWKLGNMGANIVL--NGSPASTSLDATAEEFKAAGIN 56

Query: 58  VEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKK 113
           V V   D+   ED E     A+D      G +D  V+     G  +D L +   E ++  
Sbjct: 57  VVVAKGDVKNPEDVENMVKTAMDA----FGRIDILVNN---AGITRDTLMLKMSEKDWDD 109

Query: 114 LVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLV 173
           ++  N  + +   KAV + M + K+ G I+ +TSI G   G   G A Y A  A +    
Sbjct: 110 VLNTNLKSAYLCTKAVSKIMLKQKS-GKIINITSIAGI-IG-NAGQANYAASKAGLIGFT 166

Query: 174 RTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKND 228
           ++ A E     I  N +A G+       I      V  ++  ++     PL R+   + +
Sbjct: 167 KSIAKEFAAKGIYCNAVAPGI-------IKTDMTDVLPDKVKEMYLNNIPLKRFGTPE-E 218

Query: 229 LASTVIYLISDGSRYMTGTTIYVDG 253
           +A+ V +L SD S Y+TG  I +DG
Sbjct: 219 VANVVGFLASDDSNYITGQVINIDG 243

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 80.6 bits (200), Expect = 2e-18
 Identities = 58/245 (23%), Positives = 117/245 (47%), Gaps = 26/245 (10%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDE 75
           I + IA  LA  G  +++ G +  R  +VAE++    K G     V +++    E + ++
Sbjct: 19  IGRAIAEKLASAGSTVIITGTSGERAKAVAEEIAN--KYGVKAHGVEMNLLS--EESINK 74

Query: 76  AVDKACQILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKKLVKINFVAPWFLLKAVGRRM 133
           A ++   ++  +D  V+     G  +D L +     ++++++K+N    + + +   R+M
Sbjct: 75  AFEEIYNLVDGIDILVNN---AGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKM 131

Query: 134 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG 193
            + + G  IV ++S++G   G   G   Y    A +    ++ A E+    + VN +A G
Sbjct: 132 IKQRWG-RIVNISSVVGF-TG-NVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPG 188

Query: 194 LHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTT 248
                   I     AV  E   +  +E  PL R+   + ++A+ V++L S+ + Y+TG  
Sbjct: 189 F-------IETDMTAVLSEEIKQKYKEQIPLGRFGSPE-EVANVVLFLCSELASYITGEV 240

Query: 249 IYVDG 253
           I+V+G
Sbjct: 241 IHVNG 245

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 81.1 bits (201), Expect = 2e-18
 Identities = 58/269 (21%), Positives = 106/269 (39%), Gaps = 38/269 (14%)

Query: 1   MENQAKRVLLT--SDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKG-GQP 57
           +    +  L+T  + G  + K +   L  +G  + +       ++  E M  + K   + 
Sbjct: 3   LGRFVRHALITAGTKG--LGKQVTEKLLAKGYSVTV--TYHSDTTAMETMKETYKDVEER 58

Query: 58  VEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFV----HCYTYEGKMQDPLQVGEDEF 111
           ++ V  D+  +ED     +EA+       G +D  +           K+   +   EDE+
Sbjct: 59  LQFVQADVTKKEDLHKIVEEAMSH----FGKIDFLINNAGPYVFERKKL---VDYEEDEW 111

Query: 112 KKLVKINFVAPWFLLKAVGRRMKESKAGGSIV--FLTSIIGAERGLYPGAAAYGACAASI 169
            ++++ N  A + LLK V   M++    G I+         A  G +   +A+ A    +
Sbjct: 112 NEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSA-PG-WIYRSAFAAAKVGL 168

Query: 170 HQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLD 224
             L +T A E  ++ I  N +  G        I         + A +L     P+ R   
Sbjct: 169 VSLTKTVAYEEAEYGITANMVCPGD-------IIGEMKEATIQEARQLKEHNTPIGRSGT 221

Query: 225 VKNDLASTVIYLISDGSRYMTGTTIYVDG 253
            + D+A T+ +L  D S  +TGT I V G
Sbjct: 222 GE-DIARTISFLCEDDSDMITGTIIEVTG 249

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 81.1 bits (201), Expect = 3e-18
 Identities = 62/253 (24%), Positives = 99/253 (39%), Gaps = 34/253 (13%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK 79
           +A  L + G +LV     ER    + EK++  L       +  +D++ D         ++
Sbjct: 50  VAKVLDQLGAKLVFTYRKERSRKEL-EKLLEQL-NQPEAHLYQIDVQSD--EEVINGFEQ 105

Query: 80  ACQILGNLDAFVHCYTYEGKMQ---DPLQVGEDEFKKLVKIN---FVAPWFLLKAVGRRM 133
             + +GN+D   H   +           +   + F     I+         +     + M
Sbjct: 106 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTI---VAHEAKKLM 162

Query: 134 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG 193
            E   GGSIV  T + G E          G   AS+   V+  A+++G   IRVN I+ G
Sbjct: 163 PE---GGSIVATTYL-GGEF-AVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAG 217

Query: 194 LHLQDEYPI------AVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
                  PI       VG    + K + E APL R +D   ++  T  YL+SD S  +TG
Sbjct: 218 -------PIRTLSAKGVGGFNTILKEIEERAPLKRNVDQ-VEVGKTAAYLLSDLSSGVTG 269

Query: 247 TTIYVDGAQSITR 259
             I+VD      +
Sbjct: 270 ENIHVDSGFHAIK 282

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 81.1 bits (201), Expect = 3e-18
 Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 18/187 (9%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
           K+V++T  S G  I + +A+HLAK G  +V+   ++  L  V    +    G      + 
Sbjct: 29  KKVIVTGASKG--IGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLE--LGAASAHYIA 84

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFV 120
             M ED     ++ V +A +++G LD  +          +           +K +++NF+
Sbjct: 85  GTM-EDMT-FAEQFVAQAGKLMGGLDMLILNHITNTSLNLFH---DDIHHVRKSMEVNFL 139

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
           +   L  A    +K+S   GSIV ++S+ G +    P  AAY A   ++     +   E 
Sbjct: 140 SYVVLTVAALPMLKQSN--GSIVVVSSLAG-KVAY-PMVAAYSASKFALDGFFSSIRKEY 195

Query: 181 GKHKIRV 187
              ++ V
Sbjct: 196 SVSRVNV 202

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 80.2 bits (199), Expect = 4e-18
 Identities = 63/263 (23%), Positives = 115/263 (43%), Gaps = 34/263 (12%)

Query: 1   MENQAKRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQP 57
           M  + K  L+T  S G  I K IA  LA+RG +++    +E    ++++ +      G  
Sbjct: 5   MNLEGKVALVTGASRG--IGKAIAELLAERGAKVIGTATSESGAQAISDYL------GDN 56

Query: 58  VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKKLV 115
            + + L++      + +  +       G +D  V+     G  +D L +   E+E+  ++
Sbjct: 57  GKGMALNVTN--PESIEAVLKAITDEFGGVDILVNN---AGITRDNLLMRMKEEEWSDIM 111

Query: 116 KINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRT 175
           + N  + + L KAV R M + +  G I+ + S++G   G   G A Y A  A +    ++
Sbjct: 112 ETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGT-MG-NAGQANYAAAKAGVIGFTKS 168

Query: 176 AAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKNDLA 230
            A E+    + VN +A G        I         +          P  R  D + ++A
Sbjct: 169 MAREVASRGVTVNTVAPGF-------IETDMTKALNDEQRTATLAQVPAGRLGDPR-EIA 220

Query: 231 STVIYLISDGSRYMTGTTIYVDG 253
           S V +L S  + Y+TG T++V+G
Sbjct: 221 SAVAFLASPEAAYITGETLHVNG 243

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 79.5 bits (197), Expect = 7e-18
 Identities = 64/263 (24%), Positives = 112/263 (42%), Gaps = 38/263 (14%)

Query: 1   MENQAKRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQP 57
           ++   K  L+T  S G  I   IA  L K G ++++ G NE +L S+   +         
Sbjct: 10  IDLTGKTSLITGASSG--IGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL------KDN 61

Query: 58  VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKKLV 115
             +   ++         E          NLD  V      G   D L +   + +F K++
Sbjct: 62  YTIEVCNLANK------EECSNLISKTSNLDILVCN---AGITSDTLAIRMKDQDFDKVI 112

Query: 116 KINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRT 175
            IN  A + L +   ++M + + G  I+ ++SI+G   G  PG A Y A  A +  + ++
Sbjct: 113 DINLKANFILNREAIKKMIQKRYG-RIINISSIVGI-AG-NPGQANYCASKAGLIGMTKS 169

Query: 176 AAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKNDLA 230
            + E+    I VN +A G        I         E+  + + +  PL     +  D+A
Sbjct: 170 LSYEVATRGITVNAVAPGF-------IKSDMTDKLNEKQREAIVQKIPLGT-YGIPEDVA 221

Query: 231 STVIYLISDGSRYMTGTTIYVDG 253
             V +L S+ + Y+TG T++V+G
Sbjct: 222 YAVAFLASNNASYITGQTLHVNG 244

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 79.6 bits (197), Expect = 8e-18
 Identities = 58/258 (22%), Positives = 98/258 (37%), Gaps = 40/258 (15%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFDEAV 77
            A  L  +G   VL+        + A+K+      G        D+  E+D + A   A 
Sbjct: 28  TAERLVGQGASAVLLDLPNSGGEAQAKKL------GNNCVFAPADVTSEKDVQTALALAK 81

Query: 78  DKACQILGNLDAFVHC-------YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVG 130
            K     G +D  V+C        TY  K      +  ++F++++ +N +  + +++ V 
Sbjct: 82  GK----FGRVDVAVNCAGIAVASKTYNLKKGQTHTL--EDFQRVLDVNLMGTFNVIRLVA 135

Query: 131 RRMKESKAG-----GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 185
             M +++       G I+   S+   E G   G AAY A    I  +    A ++    I
Sbjct: 136 GEMGQNEPDQGGQRGVIINTASVAAFE-GQ-VGQAAYSASKGGIVGMTLPIARDLAPIGI 193

Query: 186 RVNGIARGLHLQDEYPIAVGQ-ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
           RV  IA GL      P+     E+    +    P    L    + A  V  +I +   ++
Sbjct: 194 RVMTIAPGLF---GTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIENP--FL 248

Query: 245 TGTTIYVDGAQSITRPRM 262
            G  I +DGA      RM
Sbjct: 249 NGEVIRLDGAI-----RM 261

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 79.5 bits (197), Expect = 1e-17
 Identities = 54/247 (21%), Positives = 106/247 (42%), Gaps = 31/247 (12%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I + IA  LAK    ++ +   ++   SV +++      G        D+  +E+     
Sbjct: 56  IGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF---GYESSGYAGDVSKKEEISEVI 112

Query: 74  DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKKLVKINFVAPWFLLKAVGR 131
           ++ + +      N+D  V+     G  +D L +    DE++ +++ N  + +++ + + +
Sbjct: 113 NKILTE----HKNVDILVNN---AGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISK 165

Query: 132 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 191
           RM  ++  G I+ ++SI+G   G   G A Y +  A +    ++ A E+    I VN IA
Sbjct: 166 RMINNRY-GRIINISSIVGL-TG-NVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIA 222

Query: 192 RGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
            G        I         E+  K +    P  R    + ++A+   +L SD S Y+ G
Sbjct: 223 PGF-------ISSDMTDKISEQIKKNIISNIPAGRMGTPE-EVANLACFLSSDKSGYING 274

Query: 247 TTIYVDG 253
               +DG
Sbjct: 275 RVFVIDG 281

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 78.7 bits (195), Expect = 1e-17
 Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 30/247 (12%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKG-GQPVEVVGLDM--EEDREGAF 73
           I ++IA  LA+ G  + +  N       AE ++  +K  G     +  ++   ++ +   
Sbjct: 16  IGRSIALQLAEEGYNVAV--NYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMI 73

Query: 74  DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKKLVKINFVAPWFLLKAVGR 131
            E V +     G+LD  V+     G  +D L +   E E+  ++  N    +  ++    
Sbjct: 74  KEVVSQ----FGSLDVLVNN---AGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATP 126

Query: 132 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 191
           +M   ++G +I+ L+S++GA  G  PG A Y A  A +  L ++AA E+    I VN +A
Sbjct: 127 QMLRQRSG-AIINLSSVVGA-VG-NPGQANYVATKAGVIGLTKSAARELASRGITVNAVA 183

Query: 192 RGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
            G        I         +   + +    PL R+     D+A+TV +L SD ++Y+TG
Sbjct: 184 PGF-------IVSDMTDALSDELKEQMLTQIPLARFGQDT-DIANTVAFLASDKAKYITG 235

Query: 247 TTIYVDG 253
            TI+V+G
Sbjct: 236 QTIHVNG 242

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 78.3 bits (194), Expect = 2e-17
 Identities = 72/248 (29%), Positives = 113/248 (45%), Gaps = 32/248 (12%)

Query: 17  ISKNIAFHLAKRGCRLVL--VGNERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGA 72
           I + IA  LAK+G  +V+   GNE++ + V +++      G     V  D+   ED    
Sbjct: 16  IGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL---GSDAIAVRADVANAEDVTNM 72

Query: 73  FDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKKLVKINFVAPWFLLKAVG 130
             + VD      G +D  V+     G  +D L +   E+E+  ++  N    +   KAV 
Sbjct: 73  VKQTVDV----FGQVDILVNN---AGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVS 125

Query: 131 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 190
           R M   + G  IV + S++G   G  PG A Y A  A +  L +T+A E+    I VN I
Sbjct: 126 RFMMRQRHG-RIVNIASVVGV-TG-NPGQANYVAAKAGVIGLTKTSAKELASRNITVNAI 182

Query: 191 ARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMT 245
           A G        I      V  E     + +  P  ++ + + D+A+ V +  SD S+Y+T
Sbjct: 183 APGF-------IATDMTDVLDENIKAEMLKLIPAAQFGEAQ-DIANAVTFFASDQSKYIT 234

Query: 246 GTTIYVDG 253
           G T+ VDG
Sbjct: 235 GQTLNVDG 242

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 77.6 bits (192), Expect = 4e-17
 Identities = 63/264 (23%), Positives = 109/264 (41%), Gaps = 44/264 (16%)

Query: 1   MENQAKRVLLT--SDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPV 58
             + ++ VL+T  + G  I   IA   A  G ++ +                S +  +  
Sbjct: 17  RSHMSRSVLVTGGNRG--IGLAIARAFADAGDKVAITYR-------------SGEPPEGF 61

Query: 59  EVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKKL 114
             V  D+   E  E A+ E  +      G ++  +      G  +D L +   E++F  +
Sbjct: 62  LAVKCDITDTEQVEQAYKEIEET----HGPVEVLIAN---AGVTKDQLLMRMSEEDFTSV 114

Query: 115 VKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVR 174
           V+ N    + ++K   R M  +K G  +V ++S++G   G   G A Y A  A +    R
Sbjct: 115 VETNLTGTFRVVKRANRAMLRAKKG-RVVLISSVVGL-LG-SAGQANYAASKAGLVGFAR 171

Query: 175 TAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKNDL 229
           + A E+G   I  N +A G        +      V  +     +    PL R+   + ++
Sbjct: 172 SLARELGSRNITFNVVAPGF-------VDTDMTKVLTDEQRANIVSQVPLGRYARPE-EI 223

Query: 230 ASTVIYLISDGSRYMTGTTIYVDG 253
           A+TV +L SD + Y+TG  I VDG
Sbjct: 224 AATVRFLASDDASYITGAVIPVDG 247

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 77.6 bits (192), Expect = 4e-17
 Identities = 55/256 (21%), Positives = 94/256 (36%), Gaps = 38/256 (14%)

Query: 21  IAFHLAKRGCRLVLV-GNERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFDEAV 77
           +   LA+ G  ++ +          A ++      G  V     D+  E D   A   A 
Sbjct: 23  VTRMLAQEGATVLGLDLKPPAGEEPAAEL------GAAVRFRNADVTNEADATAALAFAK 76

Query: 78  DKACQILGNLDAFVHC--YTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR 132
            +     G++   V+C       K      P  +  D F + V +N +  + +++     
Sbjct: 77  QE----FGHVHGLVNCAGTAPGEKILGRSGPHAL--DSFARTVAVNLIGTFNMIRLAAEV 130

Query: 133 MKESKAG-----GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRV 187
           M + +       G IV   SI   + G   G AAY A    +  L   AA E+ +  IRV
Sbjct: 131 MSQGEPDADGERGVIVNTASIAAFD-GQ-IGQAAYAASKGGVAALTLPAARELARFGIRV 188

Query: 188 NGIARGLHLQDEYPIAVGQ-ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
             IA G+    + P+  G  +     +  + P    L    + A+ V ++  +    + G
Sbjct: 189 VTIAPGIF---DTPMMAGMPQDVQDALAASVPFPPRLGRAEEYAALVKHICENT--MLNG 243

Query: 247 TTIYVDGAQSITRPRM 262
             I +DGA      RM
Sbjct: 244 EVIRLDGAL-----RM 254

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 77.7 bits (192), Expect = 5e-17
 Identities = 51/197 (25%), Positives = 81/197 (41%), Gaps = 19/197 (9%)

Query: 4   QAKRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEV 60
            +  + +T  + G    +  A   A+ G  LVL G  E RL ++A +    L     V  
Sbjct: 20  MSSTLFITGATSG--FGEACARRFAEAGWSLVLTGRREERLQALAGE----LSAKTRVLP 73

Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM--QDPLQVGE-DEFKKLVKI 117
           + LD+  DR  A   AVD   +    L   ++     G     DP Q  + D++  +V  
Sbjct: 74  LTLDVR-DRA-AMSAAVDNLPEEFATLRGLINN---AGLALGTDPAQSCDLDDWDTMVDT 128

Query: 118 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAA 177
           N     +  + +  R+    AG SIV L S+  A +  YPG+  YG   A + Q      
Sbjct: 129 NIKGLLYSTRLLLPRLIAHGAGASIVNLGSV--AGKWPYPGSHVYGGTKAFVEQFSLNLR 186

Query: 178 MEIGKHKIRVNGIARGL 194
            ++    +RV  +  GL
Sbjct: 187 CDLQGTGVRVTNLEPGL 203

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 77.2 bits (191), Expect = 5e-17
 Identities = 55/252 (21%), Positives = 99/252 (39%), Gaps = 36/252 (14%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK 79
           IA  L + G  + L    ER      EK+  +L G     +   D+ +D     D     
Sbjct: 26  IAAKLKEAGAEVALSYQAERLRPEA-EKLAEALGGA---LLFRADVTQD--EELDALFAG 79

Query: 80  ACQILGNLDAFVHCYTYEGKMQ---DPLQVGEDEFKKLVKIN---FVAPWFLLKAVGRRM 133
             +  G LD  VH   +  +       +     ++   ++++    VA   + +     +
Sbjct: 80  VKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVA---VARRAEPLL 136

Query: 134 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG 193
           +E   GG IV LT    +E+ + P         A++   VR  A E+G   +RVN I+ G
Sbjct: 137 RE---GGGIVTLT-YYASEK-VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAG 191

Query: 194 LHLQDEYPI------AVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
                  P+      ++     +   V + APL R +    ++ +  ++L+S  +  +TG
Sbjct: 192 -------PVRTVAARSIPGFTKMYDRVAQTAPLRRNITQ-EEVGNLGLFLLSPLASGITG 243

Query: 247 TTIYVDGAQSIT 258
             +YVD    I 
Sbjct: 244 EVVYVDAGYHIM 255

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 77.2 bits (191), Expect = 6e-17
 Identities = 70/252 (27%), Positives = 105/252 (41%), Gaps = 34/252 (13%)

Query: 21  IAFHLAKRGCRLVLV-GNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK 79
           IA  L + G RL+     ER   SV  ++ G+L       ++  D+  D     +     
Sbjct: 25  IARSLHEAGARLIFTYAGERLEKSV-HELAGTL-DRNDSIILPCDVTND--AEIETCFAS 80

Query: 80  ACQILGNLDAFVHCYTYEGKMQ---DPLQVGEDEFKKLVKIN---FVAPWFLLKAVGRRM 133
             + +G +    HC  +  K +   + L    D F     I+     A   ++KA    M
Sbjct: 81  IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTA---VVKAARPMM 137

Query: 134 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG 193
            E   GGSIV LT + G E  + P     G   AS+   V+  A ++GK  IRVN I+ G
Sbjct: 138 TE---GGSIVTLTYL-GGELVM-PNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAG 192

Query: 194 LHLQDEYPI------AVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
                  PI       +    ++ K + E APL R      ++  T  +L SD SR +TG
Sbjct: 193 -------PIRTLSAKGISDFNSILKDIEERAPLRRTTTP-EEVGDTAAFLFSDMSRGITG 244

Query: 247 TTIYVDGAQSIT 258
             ++VD    IT
Sbjct: 245 ENLHVDSGFHIT 256

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 77.2 bits (191), Expect = 6e-17
 Identities = 64/247 (25%), Positives = 106/247 (42%), Gaps = 31/247 (12%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAF 73
           I + IA  LA+RG  ++     E     +      +   G       L++      +   
Sbjct: 40  IGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA---GLEGRGAVLNVNDATAVDALV 96

Query: 74  DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKKLVKINFVAPWFLLKAVGR 131
           +  + +     G L+  V+     G  QD L +   +DE+  ++  N  A + L +AV R
Sbjct: 97  ESTLKE----FGALNVLVNN---AGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLR 149

Query: 132 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 191
            M +++ G  IV +TS++G+  G  PG   Y A  A +  + R  A EIG   I VN +A
Sbjct: 150 PMMKARGG-RIVNITSVVGS-AG-NPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVA 206

Query: 192 RGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
            G        I         +     ++   PL R    + D+A  V +L S  + Y+TG
Sbjct: 207 PGF-------IDTDMTKGLPQEQQTALKTQIPLGRLGSPE-DIAHAVAFLASPQAGYITG 258

Query: 247 TTIYVDG 253
           TT++V+G
Sbjct: 259 TTLHVNG 265

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 75.6 bits (187), Expect = 2e-16
 Identities = 67/262 (25%), Positives = 113/262 (43%), Gaps = 35/262 (13%)

Query: 5   AKRVLLT--SDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKG-GQPVEVV 61
           +  V++T  S G  I K IA  L K GC++++  N  R +  AE++   ++  G      
Sbjct: 1   SPVVVVTGASRG--IGKAIALSLGKAGCKVLV--NYARSAKAAEEVSKQIEAYGGQAITF 56

Query: 62  GLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKKLVKI 117
           G D+  E D E     A+D      G +D  V+     G  +D L +   + ++ +++ +
Sbjct: 57  GGDVSKEADVEAMMKTAIDA----WGTIDVVVNN---AGITRDTLLIRMKKSQWDEVIDL 109

Query: 118 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAA 177
           N    +   +A  + M + + G  I+ + S++G   G   G A Y A  A +    +TAA
Sbjct: 110 NLTGVFLCTQAATKIMMKKRKG-RIINIASVVGL-IG-NIGQANYAAAKAGVIGFSKTAA 166

Query: 178 MEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKNDLAST 232
            E     I VN +  G        I     A   E   K +    PL R    + ++A  
Sbjct: 167 REGASRNINVNVVCPGF-------IASDMTAKLGEDMEKKILGTIPLGRTGQPE-NVAGL 218

Query: 233 VIYL-ISDGSRYMTGTTIYVDG 253
           V +L +S  + Y+TG    +DG
Sbjct: 219 VEFLALSPAASYITGQAFTIDG 240

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 75.3 bits (186), Expect = 2e-16
 Identities = 52/246 (21%), Positives = 96/246 (39%), Gaps = 40/246 (16%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFD 74
           I   IA  LA  G ++ +                     + +  V +D+   +  + AF 
Sbjct: 27  IGLAIAQRLAADGHKVAVTHR-------------GSGAPKGLFGVEVDVTDSDAVDRAFT 73

Query: 75  EAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAVGRR 132
              +      G ++  V      G   D    ++ E++F+K++  N    + + +   R 
Sbjct: 74  AVEEH----QGPVEVLVSN---AGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRS 126

Query: 133 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 192
           M+ +K G  ++F+ S+ G   G     A Y A  A +  + R+ A E+ K  +  N +A 
Sbjct: 127 MQRNKFG-RMIFIGSVSGL-WG-IGNQANYAASKAGVIGMARSIARELSKANVTANVVAP 183

Query: 193 GLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGT 247
           G        I         ER  +   +  P  R +    ++A  V +L S+ + Y++G 
Sbjct: 184 GY-------IDTDMTRALDERIQQGALQFIPAKR-VGTPAEVAGVVSFLASEDASYISGA 235

Query: 248 TIYVDG 253
            I VDG
Sbjct: 236 VIPVDG 241

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 75.4 bits (186), Expect = 4e-16
 Identities = 59/255 (23%), Positives = 102/255 (40%), Gaps = 42/255 (16%)

Query: 21  IAFHLAKRGCRLVLV-GNER---RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEA 76
           IA  +  +G  + L   +E    R+  +AE +   L        V  D+ +    + D  
Sbjct: 48  IAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKL-------TVPCDVSDA--ESVDNM 98

Query: 77  VDKACQILGNLDAFVHCYTYEGKMQ---DPLQVGEDEFKKLVKIN---FVAPWFLLKAVG 130
                +  G+LD  VH   +  K +     +      F   + I+   F     +     
Sbjct: 99  FKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTY---IASKAE 155

Query: 131 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 190
             M     GGSI+ L+   GAE+ + P     G C A++   V+  A+++GK +IRVN I
Sbjct: 156 PLMTN---GGSILTLSYY-GAEKVV-PHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAI 210

Query: 191 ARGLHLQDEYPI------AVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
           + G       P+       +     +    +  +PL R   + +D+    +YL+SD  R 
Sbjct: 211 SAG-------PVRTLASSGISDFHYILTWNKYNSPLRRNTTL-DDVGGAALYLLSDLGRG 262

Query: 244 MTGTTIYVDGAQSIT 258
            TG T++VD    + 
Sbjct: 263 TTGETVHVDCGYHVV 277

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 74.6 bits (184), Expect = 4e-16
 Identities = 40/255 (15%), Positives = 81/255 (31%), Gaps = 32/255 (12%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVE 59
           +  +   V +   GD I   IA   A  G  +     N  +L+ +  ++  +  GG+ + 
Sbjct: 3   LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA--GGR-IV 59

Query: 60  VVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLV 115
              LD   E++     + A D        L+  +          + +     +  F+K+ 
Sbjct: 60  ARSLDARNEDEVTAFLN-AADA----HAPLEVTIFNVGANVNFPILE---TTDRVFRKVW 111

Query: 116 KINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRT 175
           ++   A +   +   R M      G I F  +   + RG   G AA+ +    +  + ++
Sbjct: 112 EMACWAGFVSGRESARLMLAHG-QGKIFFTGAT-ASLRG-GSGFAAFASAKFGLRAVAQS 168

Query: 176 AAMEIGKHKIRVN-----GIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLA 230
            A E+    I V             +++      G++          P          +A
Sbjct: 169 MARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALANPDLLMPP--------AAVA 220

Query: 231 STVIYLISDGSRYMT 245
                L        T
Sbjct: 221 GAYWQLYQQPKSAWT 235

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 75.4 bits (186), Expect = 4e-16
 Identities = 58/255 (22%), Positives = 101/255 (39%), Gaps = 42/255 (16%)

Query: 21  IAFHLAKRGCRLVLV-GNER---RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEA 76
           IA    + G  L      +    R+  +AE++   +           D+ +    + D  
Sbjct: 49  IAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFV-------AGHCDVADA--ASIDAV 99

Query: 77  VDKACQILGNLDAFVHCYTYEGKMQ---DPLQVGEDEFKKLVKIN---FVAPWFLLKAVG 130
            +   +  G LD  VH   +  K +     +   E  F   + I+     A   + +   
Sbjct: 100 FETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTA---VSRRAE 156

Query: 131 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 190
           + M +   GGSI+ LT   GAE+ + P     G   A++   V+  A+++G   IRVN I
Sbjct: 157 KLMAD---GGSILTLTYY-GAEKVM-PNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAI 211

Query: 191 ARGLHLQDEYPI------AVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
           + G       PI       +G  R + K     APL R + + +++    +Y +SD SR 
Sbjct: 212 SAG-------PIKTLAASGIGDFRYILKWNEYNAPLRRTVTI-DEVGDVGLYFLSDLSRS 263

Query: 244 MTGTTIYVDGAQSIT 258
           +TG   + D    + 
Sbjct: 264 VTGEVHHADSGYHVI 278

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 74.9 bits (185), Expect = 5e-16
 Identities = 54/252 (21%), Positives = 99/252 (39%), Gaps = 36/252 (14%)

Query: 21  IAFHLAKRGCRLVLV-GNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK 79
           IA     +G  L     NE     V   +   L      E   LD+ ++    F    + 
Sbjct: 24  IAQSCFNQGATLAFTYLNESLEKRV-RPIAQELNSPYVYE---LDVSKE--EHFKSLYNS 77

Query: 80  ACQILGNLDAFVHCYTYEGKMQ---DPLQVGEDEFKKLVKIN---FVAPWFLLKAVGRRM 133
             + LG+LD  VH   +  K       L+  +  F   ++I+    +    L   +   +
Sbjct: 78  VKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIE---LTNTLKPLL 134

Query: 134 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG 193
                G S++ L+  +G+ + +       G   A++   VR  A+++GKH IRVN ++ G
Sbjct: 135 NN---GASVLTLS-YLGSTKYM-AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAG 189

Query: 194 LHLQDEYPI------AVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 246
                  PI       +   R + K     APL + + +  ++ +  +YL+S  S  ++G
Sbjct: 190 -------PIRTLASSGIADFRMILKWNEINAPLRKNVSL-EEVGNAGMYLLSSLSSGVSG 241

Query: 247 TTIYVDGAQSIT 258
              +VD    + 
Sbjct: 242 EVHFVDAGYHVM 253

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 74.5 bits (184), Expect = 6e-16
 Identities = 65/268 (24%), Positives = 117/268 (43%), Gaps = 42/268 (15%)

Query: 1   MENQAKRVLLT--SDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKG-GQP 57
           +    +  L+T  S G  I + IA  LA  G ++ +  N    +  A++++ ++   G  
Sbjct: 24  LPLTDRIALVTGASRG--IGRAIALELAAAGAKVAV--NYASSAGAADEVVAAIAAAGGE 79

Query: 58  VEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKK 113
              V  D+  E + E  F   +++     G LD  V+     G  +D L +    D+++ 
Sbjct: 80  AFAVKADVSQESEVEALFAAVIER----WGRLDVLVNN---AGITRDTLLLRMKRDDWQS 132

Query: 114 LVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLV 173
           ++ +N    +   +A  + M + ++G  I+ + S++G   G  PG A Y A  A +  L 
Sbjct: 133 VLDLNLGGVFLCSRAAAKIMLKQRSG-RIINIASVVGE-MG-NPGQANYSAAKAGVIGLT 189

Query: 174 RTAAMEIGKHKIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVK 226
           +T A E+    I VN +A G         L  E             + E  PL R+ +  
Sbjct: 190 KTVAKELASRGITVNAVAPGFIATDMTSELAAEK------------LLEVIPLGRYGEAA 237

Query: 227 NDLASTVIYLISD-GSRYMTGTTIYVDG 253
            ++A  V +L +D  + Y+TG  I +DG
Sbjct: 238 -EVAGVVRFLAADPAAAYITGQVINIDG 264

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 72.7 bits (179), Expect = 1e-15
 Identities = 20/122 (16%), Positives = 47/122 (38%), Gaps = 11/122 (9%)

Query: 75  EAVDKACQILGNLDAFVHCYTYEGKMQD-PL-QVGEDEFKKLVKINFVAPWFLLKAVGRR 132
           +++ K  + +G +DA V      G     PL ++  ++    +         L+      
Sbjct: 47  DSIKKMYEQVGKVDAIVSA---TGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDS 103

Query: 133 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 192
           + +    GS    T I+          A+      ++    ++AA+E+ +  IR+N ++ 
Sbjct: 104 LND---KGSFTLTTGIMM--EDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRINTVSP 157

Query: 193 GL 194
            +
Sbjct: 158 NV 159

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 74.2 bits (183), Expect = 1e-15
 Identities = 57/255 (22%), Positives = 101/255 (39%), Gaps = 41/255 (16%)

Query: 21  IAFHLAKRGCRLVLV-GNER---RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEA 76
           IA    + G +L       +   R+  +A+     L       VV  D+  D +      
Sbjct: 39  IAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDL-------VVKCDVSLDED--IKNL 89

Query: 77  VDKACQILGNLDAFVHCYTYEGKMQ---DPLQVGEDEFKKLVKIN---FVAPWFLLKAVG 130
                +  G+LD  VH   Y  K +     +    + FK  + I+    +A   L + + 
Sbjct: 90  KKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIA---LTRELL 146

Query: 131 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 190
             M+     G+IV L+   GAE+ + P     G   A++   VR  A +I KH  R+N I
Sbjct: 147 PLMEGR--NGAIVTLS-YYGAEKVV-PHYNVMGIAKAALESTVRYLAYDIAKHGHRINAI 202

Query: 191 ARGLHLQDEYPI------AVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
           + G       P+      ++     + +   +  P  + + +  D+  T ++L SD +R 
Sbjct: 203 SAG-------PVKTLAAYSITGFHLLMEHTTKVNPFGKPITI-EDVGDTAVFLCSDWARA 254

Query: 244 MTGTTIYVDGAQSIT 258
           +TG  ++VD    I 
Sbjct: 255 ITGEVVHVDNGYHIM 269

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 73.8 bits (182), Expect = 1e-15
 Identities = 55/258 (21%), Positives = 96/258 (37%), Gaps = 47/258 (18%)

Query: 21  IAFHLAKRGCRLVLV-GNER---RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEA 76
           IA    + G  L      +R   R++  A +    L       V   D+ +D +   D  
Sbjct: 32  IAKACKREGAELAFTYVGDRFKDRITEFAAEFGSEL-------VFPCDVADDAQ--IDAL 82

Query: 77  VDKACQILGNLDAFVHCYTY------EGKMQDPLQVGEDEFKKLVKIN---FVAPWFLLK 127
                    +LD  VH   +       G   D   +  + F+    I+   F A   L K
Sbjct: 83  FASLKTHWDSLDGLVHSIGFAPREAIAGDFLD--GLTRENFRIAHDISAYSFPA---LAK 137

Query: 128 AVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRV 187
           A    + +     S++ L+  +GAER + P     G   A++   VR  A+ +G   +RV
Sbjct: 138 AALPMLSD---DASLLTLS-YLGAERAI-PNYNTMGLAKAALEASVRYLAVSLGAKGVRV 192

Query: 188 NGIARGLHLQDEYPI------AVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYLISDG 240
           N I+ G       PI       +     +   V   +PL R + +   + +   +L+SD 
Sbjct: 193 NAISAG-------PIKTLAASGIKSFGKILDFVESNSPLKRNVTI-EQVGNAGAFLLSDL 244

Query: 241 SRYMTGTTIYVDGAQSIT 258
           +  +T   ++VD   +  
Sbjct: 245 ASGVTAEVMHVDSGFNAV 262

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 73.4 bits (181), Expect = 1e-15
 Identities = 51/245 (20%), Positives = 101/245 (41%), Gaps = 25/245 (10%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKG-GQPVEVVGLDM--EEDREGAF 73
           +   I+  L   G  +    +    +      +   +  G+  +   +D+   E  E   
Sbjct: 37  LGAAISRRLHDAGMAVA--VSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCA 94

Query: 74  DEAVDKACQILGNLDAFVHC--YTYEG---KMQDPLQVGEDEFKKLVKINFVAPWFLLKA 128
           ++ +       G +D  ++    T +    KM         ++  +++ +  A + + K 
Sbjct: 95  EKVLAD----FGKVDVLINNAGITRDATFMKMTK------GDWDAVMRTDLDAMFNVTKQ 144

Query: 129 VGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVN 188
               M E + G  IV + S+ G+ RG   G A Y +  A IH   +T A+E  K  I VN
Sbjct: 145 FIAGMVERRFG-RIVNIGSVNGS-RG-AFGQANYASAKAGIHGFTKTLALETAKRGITVN 201

Query: 189 GIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTT 248
            ++ G  L      AV Q+     +    P+ R L   +++A+ + +L SD + ++TG  
Sbjct: 202 TVSPGY-LATAMVEAVPQDVLEAKILPQIPVGR-LGRPDEVAALIAFLCSDDAGFVTGAD 259

Query: 249 IYVDG 253
           + ++G
Sbjct: 260 LAING 264

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 73.4 bits (181), Expect = 2e-15
 Identities = 61/258 (23%), Positives = 105/258 (40%), Gaps = 47/258 (18%)

Query: 21  IAFHLAKRGCRLVLV-GNER---RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEA 76
           IA  + + G  L     N++   R+   A ++   +       V+  D+ ED   + D  
Sbjct: 27  IAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDI-------VLQCDVAED--ASIDTM 77

Query: 77  VDKACQILGNLDAFVHCYTY------EGKMQDPLQVGEDEFKKLVKIN---FVAPWFLLK 127
             +  ++    D FVH   +      +G   +   V  + FK    I+   FVA   + K
Sbjct: 78  FAELGKVWPKFDGFVHSIGFAPGDQLDGDYVN--AVTREGFKIAHDISSYSFVA---MAK 132

Query: 128 AVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRV 187
           A    +     G +++ L+ + GAER + P     G   AS+   VR  A  +G   +RV
Sbjct: 133 ACRSMLNP---GSALLTLSYL-GAERAI-PNYNVMGLAKASLEANVRYMANAMGPEGVRV 187

Query: 188 NGIARGLHLQDEYPI------AVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYLISDG 240
           N I+ G       PI       +   R +        P+ R + +  D+ ++  +L SD 
Sbjct: 188 NAISAG-------PIRTLAASGIKDFRKMLAHCEAVTPIRRTVTI-EDVGNSAAFLCSDL 239

Query: 241 SRYMTGTTIYVDGAQSIT 258
           S  ++G  ++VDG  SI 
Sbjct: 240 SAGISGEVVHVDGGFSIA 257

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 73.4 bits (181), Expect = 2e-15
 Identities = 62/254 (24%), Positives = 99/254 (38%), Gaps = 39/254 (15%)

Query: 21  IAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA 80
           IA  + + G  L      +    V EK+        P  V+  D+  D      +   + 
Sbjct: 44  IAKAMHREGAELAFTYVGQFKDRV-EKLCAEFN---PAAVLPCDVISD--QEIKDLFVEL 97

Query: 81  CQILGNLDAFVHCYTY------EGKMQDPLQVGEDEFKKLVKIN---FVAPWFLLKAVGR 131
            ++   LDA VH   +      EG   D   V  + F     I+   F A   L K    
Sbjct: 98  GKVWDGLDAIVHSIAFAPRDQLEGNFID--CVTREGFSIAHDISAYSFAA---LAKEGRS 152

Query: 132 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 191
            MK      S+V LT  IGAE+   P     G   AS+   VR  A+ +G+  I+VN ++
Sbjct: 153 MMKNR--NASMVALT-YIGAEK-AMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVS 208

Query: 192 RGLHLQDEYPI------AVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
            G       PI       +   + +       +PL + +D+  ++ +TV +L SD +  +
Sbjct: 209 AG-------PIKTLAASGISNFKKMLDYNAMVSPLKKNVDI-MEVGNTVAFLCSDMATGI 260

Query: 245 TGTTIYVDGAQSIT 258
           TG  ++VD      
Sbjct: 261 TGEVVHVDAGYHCV 274

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 72.6 bits (179), Expect = 2e-15
 Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 20/196 (10%)

Query: 4   QAKRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEV 60
           + K  ++T  S G  I + IA  LA+ G  L L   +  RL  +A ++M   + G  V  
Sbjct: 1   EMKVAVITGASRG--IGEAIARALARDGYALALGARSVDRLEKIAHELMQ--EQGVEVFY 56

Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM-QDPLQVG-EDEFKKLVKIN 118
             LD+    E + +E   K  +  G++D  V      G      L+   E+EF +++++N
Sbjct: 57  HHLDV-SKAE-SVEEFSKKVLERFGDVDVVVAN---AGLGYFKRLEELSEEEFHEMIEVN 111

Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAM 178
            +  W  LKA    +K +      +  TS + A     P    Y +   +   L      
Sbjct: 112 LLGVWRTLKAFLDSLKRTGGL--ALVTTSDVSARL--IPYGGGYVSTKWAARAL--VRTF 165

Query: 179 EIGKHKIRVNGIARGL 194
           +I    +R   +  G 
Sbjct: 166 QIENPDVRFFELRPGA 181

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 72.6 bits (179), Expect = 3e-15
 Identities = 55/269 (20%), Positives = 101/269 (37%), Gaps = 42/269 (15%)

Query: 1   MENQAKRVLLT--SDGDEISKNIAFHLAKRGCRLVL--VGNERRLSSVAEKMMGSLKGGQ 56
           M    +   +T    G  I  +I   L K G R+V     N  R     E        G 
Sbjct: 9   MVMSQRIAYVTGGMGG--IGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL---GF 63

Query: 57  PVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEG---KMQDPLQVGED 109
                  ++   +  + AFD+   +    +G +D  V+    T +    KM        +
Sbjct: 64  DFYASEGNVGDWDSTKQAFDKVKAE----VGEIDVLVNNAGITRDVVFRKMTR------E 113

Query: 110 EFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASI 169
           +++ ++  N  + + + K V   M E   G  I+ ++S+ G  +G   G   Y    A I
Sbjct: 114 DWQAVIDTNLTSLFNVTKQVIDGMVERGWG-RIINISSVNGQ-KG-QFGQTNYSTAKAGI 170

Query: 170 HQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLD 224
           H    + A E+    + VN ++ G        I        +   ++ +    P+ R L 
Sbjct: 171 HGFTMSLAQEVATKGVTVNTVSPGY-------IGTDMVKAIRPDVLEKIVATIPVRR-LG 222

Query: 225 VKNDLASTVIYLISDGSRYMTGTTIYVDG 253
             +++ S V +L S+ S + TG    ++G
Sbjct: 223 SPDEIGSIVAWLASEESGFSTGADFSLNG 251

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 69.9 bits (172), Expect = 2e-14
 Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 38/226 (16%)

Query: 60  VVGLDMEEDREGAF------------DEAVDKACQILGNLDAFVHC--YTYEGK---MQD 102
           VV LD+  + E                 AV +A +    L A V         K    + 
Sbjct: 29  VVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQE-EAPLFAVVSAAGVGLAEKILGKEG 87

Query: 103 PLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAG-----GSIVFLTSIIGAERGLYP 157
           P  +  + F++++++N +  + +L+     M+E+        G IV   S+   E G   
Sbjct: 88  PHGL--ESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE-GQ-I 143

Query: 158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ-ERAVKLVREA 216
           G AAY A    +  L   AA E+    IRV  +A GL    + P+  G  E+A   +   
Sbjct: 144 GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLF---DTPLLQGLPEKAKASLAAQ 200

Query: 217 APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM 262
            P    L    + A+ V++++ +    + G  + +DGA      RM
Sbjct: 201 VPFPPRLGRPEEYAALVLHILENP--MLNGEVVRLDGAL-----RM 239

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 69.9 bits (172), Expect = 2e-14
 Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 27/241 (11%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
           K  L+T  S G  I +  A  LA  G  + +      +L ++ +++  +   G  V V+ 
Sbjct: 8   KVALITGASSG--IGEATARALAAEGAAVAIAARRVEKLRALGDELTAA---GAKVHVLE 62

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM-QDPLQVGE-DEFKKLVKINFV 120
           LD+  DR+   D AV    + LG LD  V+     G M   P++  +  ++ +++  N +
Sbjct: 63  LDVA-DRQ-GVDAAVASTVEALGGLDILVNN---AGIMLLGPVEDADTTDWTRMIDTNLL 117

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
              ++ +A    +  SK  G++V ++SI  A R     AA Y A    ++    T   E+
Sbjct: 118 GLMYMTRAALPHLLRSK--GTVVQMSSI--AGRVNVRNAAVYQATKFGVNAFSETLRQEV 173

Query: 181 GKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI 237
            +  +RV  I  G     L+        +E   + + +   L        D+A  V Y +
Sbjct: 174 TERGVRVVVIEPGTTDTELRGHITHTATKEMYEQRISQIRKLQ-----AQDIAEAVRYAV 228

Query: 238 S 238
           +
Sbjct: 229 T 229

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 69.9 bits (172), Expect = 2e-14
 Identities = 43/225 (19%), Positives = 85/225 (37%), Gaps = 26/225 (11%)

Query: 21  IAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK 79
           I     ++G +++  G  + RL  + +++      G  + +  LD+  +R  A +E +  
Sbjct: 16  ITRRFIQQGHKVIATGRRQERLQELKDEL------GDNLYIAQLDVR-NRA-AIEEMLAS 67

Query: 80  ACQILGNLDAFVHCYTYEGKM--QDPLQVG-EDEFKKLVKINFVAPWFLLKAVGRRMKES 136
                 N+D  V+     G     +P      ++++ ++  N     ++ +AV   M E 
Sbjct: 68  LPAEWCNIDILVNN---AGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER 124

Query: 137 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL 196
             G  I+ + S   A    Y G   YGA  A + Q       ++    +RV  I  GL  
Sbjct: 125 NHG-HIINIGST--AGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVG 181

Query: 197 QDEYPIAV---GQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 238
             E+          +A K  +    L        D++  V ++ +
Sbjct: 182 GTEFSNVRFKGDDGKAEKTYQNTVAL-----TPEDVSEAVWWVST 221

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 70.5 bits (173), Expect = 2e-14
 Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 39/213 (18%)

Query: 66  EEDREGAFDEAVDKACQIL----GNLDAFVHCYTYEGKMQDP-LQVGEDEFKKLVKI--- 117
            +   G+ +  V +A + +    G++D  VH      ++  P L+     +   +     
Sbjct: 95  NKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSY 154

Query: 118 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY----GACAASIHQLV 173
           +FV+   LL      M     GG+ + LT I  +ER + PG   Y     +  A++    
Sbjct: 155 SFVS---LLSHFLPIMNP---GGASISLTYI-ASERII-PG---YGGGMSSAKAALESDT 203

Query: 174 RTAAMEIG-KHKIRVNGIARGLHLQDEYPI------AVGQERAV-KLVREAAPLHRWLDV 225
           R  A E G K  IRVN I+ G       P+      A+G    + +     AP+ + L  
Sbjct: 204 RVLAFEAGRKQNIRVNTISAG-------PLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTA 256

Query: 226 KNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 258
            +++ +   +L+S  +  +TG TIYVD   +  
Sbjct: 257 -DEVGNAAAFLVSPLASAITGATIYVDNGLNSM 288

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 69.5 bits (171), Expect = 2e-14
 Identities = 45/246 (18%), Positives = 94/246 (38%), Gaps = 39/246 (15%)

Query: 1   MENQAKRVLLT--SDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPV 58
           M  + K  ++T  + G  +   I   L++      L  N   L+++AE       G +P+
Sbjct: 1   MSLKKKIAVVTGATGG--MGIEIVKDLSRDHIVYALGRNPEHLAALAEIE-----GVEPI 53

Query: 59  EVVGLDM-EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQD-PLQVG-EDEFKKLV 115
           E    D+ +E  E    + +      L ++D  VH        +D  ++ G   E+   +
Sbjct: 54  E---SDIVKEVLEEGGVDKLKN----LDHVDTLVHA---AAVARDTTIEAGSVAEWHAHL 103

Query: 116 KINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRT 175
            +N + P  L + +   ++   A G ++++ S  G   G +PG   Y A   ++  L   
Sbjct: 104 DLNVIVPAELSRQLLPALRA--ASGCVIYINSGAG--NGPHPGNTIYAASKHALRGLADA 159

Query: 176 AAMEIGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAST 232
              E   + IRV+ ++ G     +          +      R    +        ++A+ 
Sbjct: 160 FRKEEANNGIRVSTVSPGPTNTPMLQGLM-----DSQGTNFRPEIYIE-----PKEIANA 209

Query: 233 VIYLIS 238
           + ++I 
Sbjct: 210 IRFVID 215

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 69.8 bits (171), Expect = 4e-14
 Identities = 59/222 (26%), Positives = 93/222 (41%), Gaps = 35/222 (15%)

Query: 59  EVVGLDMEEDREGAF------DEAVDKACQILGNLDAFVHCYTYEGKMQDP-LQVGEDEF 111
           E V  D+++++  A        E   K  Q LGN+D  VH      ++  P L+     +
Sbjct: 87  EDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGY 146

Query: 112 KKLVKI---NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL--YPGAAAYGACA 166
                    +FV+   LL+  G  M E   GGS V L+ +  AER +  Y G     +  
Sbjct: 147 LAASSNSAYSFVS---LLQHFGPIMNE---GGSAVTLSYL-AAERVVPGYGGGM--SSAK 197

Query: 167 ASIHQLVRTAAMEIG-KHKIRVNGI---------ARGLHLQDEYPIAVGQERAVKLVREA 216
           A++    RT A E G K+ +RVN I         A  +    +       + A+      
Sbjct: 198 AALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIG---KSGEKSFIDYAIDYSYNN 254

Query: 217 APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 258
           APL R L   +D+    ++L+S  +R ++G T+YVD      
Sbjct: 255 APLRRDLHS-DDVGGAALFLLSPLARAVSGVTLYVDNGLHAM 295

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 68.8 bits (169), Expect = 6e-14
 Identities = 55/261 (21%), Positives = 96/261 (36%), Gaps = 50/261 (19%)

Query: 21  IAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFDEAVD 78
               L   G ++V++  + R   V   +      G        D+  E     A D A  
Sbjct: 25  TTKRLLDAGAQVVVL--DIRGEDVVADL------GDRARFAAADVTDEAAVASALDLAET 76

Query: 79  KACQILGNLDAFVHC---------YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAV 129
                +G L   V+C          + +G            F+K+V IN V  + +L+  
Sbjct: 77  -----MGTLRIVVNCAGTGNAIRVLSRDGVFS------LAAFRKIVDINLVGSFNVLRLA 125

Query: 130 GRRMKESKAG-------GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
             R+ +++         G I+   S+   + G   G AAY A    +  +    A ++  
Sbjct: 126 AERIAKTEPVGPNAEERGVIINTASVAAFD-GQ-IGQAAYSASKGGVVGMTLPIARDLAS 183

Query: 183 HKIRVNGIARGLHLQDEYPIAVGQ-ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 241
           H+IRV  IA GL    + P+     E A   + +  P    L   ++  +  +++I +  
Sbjct: 184 HRIRVMTIAPGLF---DTPLLASLPEEARASLGKQVPHPSRLGNPDEYGALAVHIIENP- 239

Query: 242 RYMTGTTIYVDGAQSITRPRM 262
             + G  I +DGA      RM
Sbjct: 240 -MLNGEVIRLDGAI-----RM 254

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 68.7 bits (168), Expect = 1e-13
 Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 39/223 (17%)

Query: 60  VVGLDMEEDREGAF------DEAVDKACQILGNLDAFVHCYTYEGKMQDP-LQVGEDEFK 112
            V  ++  ++  A        E  +     +G +D  VH      ++  P LQ     + 
Sbjct: 101 DVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYL 160

Query: 113 KLVKI---NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY----GAC 165
             V     +FV+   LL+     MKE   GGS + L+  I +E+ + PG   Y     + 
Sbjct: 161 AAVSSSSYSFVS---LLQHFLPLMKE---GGSALALS-YIASEKVI-PG---YGGGMSSA 209

Query: 166 AASIHQLVRTAAMEIGK-HKIRVNGI---------ARGLHLQDEYPIAVGQERAVKLVRE 215
            A++    RT A E G+   +RVN I         A  +    +       + A+     
Sbjct: 210 KAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAI---GKAGDKTFIDLAIDYSEA 266

Query: 216 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 258
            APL + L+  +D+    ++L+S  +R +TG T+YVD      
Sbjct: 267 NAPLQKELES-DDVGRAALFLLSPLARAVTGATLYVDNGLHAM 308

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 69.2 bits (170), Expect = 1e-13
 Identities = 49/246 (19%), Positives = 86/246 (34%), Gaps = 31/246 (12%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFD 74
           I   IA   A+ G  +V +         A + +  +        + LD+  ++  +    
Sbjct: 225 IGATIAEVFARDGATVVAID-----VDGAAEDLKRVADKVGGTALTLDVTADDAVDKITA 279

Query: 75  EAVDKACQILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKKLVKINFVAPWFLLKAVGRR 132
              +      G +D  V+     G  +D L     E  +  ++ +N +AP  L + +   
Sbjct: 280 HVTEHH---GGKVDILVNN---AGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGN 333

Query: 133 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 192
               + GG ++ L+S+ G   G   G   Y    A +  L    A  +    I +N +A 
Sbjct: 334 GTIGE-GGRVIGLSSMAGI-AG-NRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAP 390

Query: 193 GLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGT 247
           G        I             ++ R    L +      D+A  + Y  S  S  +TG 
Sbjct: 391 GF-------IETKMTEAIPLATREVGRRLNSLFQ-GGQPVDVAELIAYFASPASNAVTGN 442

Query: 248 TIYVDG 253
           TI V G
Sbjct: 443 TIRVCG 448

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 67.2 bits (165), Expect = 1e-13
 Identities = 37/247 (14%), Positives = 90/247 (36%), Gaps = 46/247 (18%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
             +++T  S G  +   +A      G    L G +E +LS+V   +         V    
Sbjct: 2   SLIVITGASSG--LGAELAKLYDAEGKATYLTGRSESKLSTVTNCL------SNNVGYRA 53

Query: 63  LDM--EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKIN 118
            D+   ++ E  F++       +       VH     Y G +Q+      ++ + L++ N
Sbjct: 54  RDLASHQEVEQLFEQ-------LDSIPSTVVHSAGSGYFGLLQE---QDPEQIQTLIENN 103

Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAM 178
             +   +L+ + +R K+     ++V + S     +      + Y A   ++  L+ +  +
Sbjct: 104 LSSAINVLRELVKRYKDQ--PVNVVMIMSTAA--QQPKAQESTYCAVKWAVKGLIESVRL 159

Query: 179 EIGKHKIRVNGIARGLHLQDEYPIAVG---QERAVKLVREAAPLHRWLDVKNDLASTVIY 235
           E+    +++  +         YP  +     E + K +  ++ +    D     A  +  
Sbjct: 160 ELKGKPMKIIAV---------YPGGMATEFWETSGKSLDTSSFMS-AEDA----ALMIHG 205

Query: 236 LISDGSR 242
            +++   
Sbjct: 206 ALANIGN 212

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 67.6 bits (166), Expect = 2e-13
 Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 22/193 (11%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
           K V++T  S G  I + IA   ++ G  L+L+   RR+  +       L          +
Sbjct: 17  KLVVITGASSG--IGEAIARRFSEEGHPLLLLA--RRVERLKA-----LNLPN-TLCAQV 66

Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM-QDPLQVGE-DEFKKLVKINFVA 121
           D+  D+   FD A+ +A +I G  DA V+     G M    +   E +E++++  +N + 
Sbjct: 67  DVT-DKY-TFDTAITRAEKIYGPADAIVNN---AGMMLLGQIDTQEANEWQRMFDVNVLG 121

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
               ++AV   MK    G +I+ ++SI  A +  +P  AAY     ++H +      E+ 
Sbjct: 122 LLNGMQAVLAPMKARNCG-TIINISSI--AGKKTFPDHAAYCGTKFAVHAISENVREEVA 178

Query: 182 KHKIRVNGIARGL 194
              +RV  IA   
Sbjct: 179 ASNVRVMTIAPSA 191

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 67.3 bits (165), Expect = 2e-13
 Identities = 57/245 (23%), Positives = 100/245 (40%), Gaps = 29/245 (11%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAKRG---CRLVLVG-NERRLSSVAEKMMGSLKGGQPVE 59
           K VL+T  S G  I K  A    +      +L+L      +L  + + +       + V 
Sbjct: 34  KTVLITGASAG--IGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAK-VH 90

Query: 60  VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM--QDPLQVGE-DEFKKLVK 116
           V  LD+    E      ++   Q   ++D  V+     GK    D +     ++ + +  
Sbjct: 91  VAQLDIT-QAE-KIKPFIENLPQEFKDIDILVNN---AGKALGSDRVGQIATEDIQDVFD 145

Query: 117 INFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTA 176
            N  A   + +AV    +   +G  IV L SI  A R  YP  + Y A   ++     + 
Sbjct: 146 TNVTALINITQAVLPIFQAKNSG-DIVNLGSI--AGRDAYPTGSIYCASKFAVGAFTDSL 202

Query: 177 AMEIGKHKIRVNGIARGLHLQDEYPIAV---GQERAVKLVREAAPLHRWLDVKNDLASTV 233
             E+   KIRV  IA GL ++ E+ +      +E+A  + ++  PL     + +D+A  +
Sbjct: 203 RKELINTKIRVILIAPGL-VETEFSLVRYRGNEEQAKNVYKDTTPL-----MADDVADLI 256

Query: 234 IYLIS 238
           +Y  S
Sbjct: 257 VYATS 261

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 67.4 bits (165), Expect = 3e-13
 Identities = 41/186 (22%), Positives = 68/186 (36%), Gaps = 13/186 (6%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           +  ++T     I    A   A+RG RLVL   ++  L      + G    G     V  D
Sbjct: 32  RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ---GFDAHGVVCD 88

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
           +            D+A ++LG +D           G +     +  D+++ ++ I+    
Sbjct: 89  VR--HLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQ---MNHDDWRWVIDIDLWGS 143

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
              ++A   R+ E   GG I F  S  G       G   YG     +  L  T A E+  
Sbjct: 144 IHAVEAFLPRLLEQGTGGHIAFTASFAGL--VPNAGLGTYGVAKYGVVGLAETLAREVKP 201

Query: 183 HKIRVN 188
           + I V+
Sbjct: 202 NGIGVS 207

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 67.4 bits (165), Expect = 3e-13
 Identities = 54/258 (20%), Positives = 99/258 (38%), Gaps = 41/258 (15%)

Query: 17  ISKNIAFHLAKRGCRLV-------LVGNERRLSSVAEKMMGSLK--GGQPVEVVGLDMEE 67
           I +  A   A  G R+V       L G+     S A+ ++  +   GG+ V     ++  
Sbjct: 39  IGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGS-NVA- 96

Query: 68  DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFL 125
           D + A    +  A +  G LD  V+     G ++D +     E+EF  ++ ++    +  
Sbjct: 97  DWDQA-AGLIQTAVETFGGLDVLVNN---AGIVRDRMIANTSEEEFDAVIAVHLKGHFAT 152

Query: 126 LKAVGRRMKESKA-----GGSIVFLTSIIGAERGLY--PGAAAYGACAASIHQLVRTAAM 178
           ++      +          G I+  +S  G    L    G   Y A  A I  L    A 
Sbjct: 153 MRHAAAYWRGLSKAGKAVDGRIINTSSGAG----LQGSVGQGNYSAAKAGIATLTLVGAA 208

Query: 179 EIGKHKIRVNGIARGLHLQDEYPIAVG---QERAVKLVREAAPLHRWLDVKNDLASTVIY 235
           E+G++ + VN IA         P A     +    +++         +  +N ++  V++
Sbjct: 209 EMGRYGVTVNAIA---------PSARTRMTETVFAEMMATQDQDFDAMAPEN-VSPLVVW 258

Query: 236 LISDGSRYMTGTTIYVDG 253
           L S  +R +TG    V+G
Sbjct: 259 LGSAEARDVTGKVFEVEG 276

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 65.1 bits (159), Expect = 2e-12
 Identities = 39/259 (15%), Positives = 82/259 (31%), Gaps = 31/259 (11%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           +   +T   + +   +   L  +GC++ +    +  +       + +   G  V  V LD
Sbjct: 9   RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALA-TLEAEGSGPEVMGVQLD 67

Query: 65  MEEDREGAFDEAVDKACQILGNLD-----AFVHCYTYEGKMQDPLQVGEDEFKKLVKINF 119
           +   RE  F  A D+     G +      A V         Q   +   D++  L+ +N 
Sbjct: 68  VA-SRE-GFKMAADEVEARFGPVSILCNNAGV------NLFQPIEESSYDDWDWLLGVNL 119

Query: 120 VAPWFLLKAVGRRMKESKA-----GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVR 174
                 +     RM E        GG +V   S+             Y     ++  L  
Sbjct: 120 HGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAA--FLAAGSPGIYNTTKFAVRGLSE 177

Query: 175 TAAMEIGKHKIRVN---------GIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDV 225
           +    + K++I V+          I     ++ +      +      V   A +H +   
Sbjct: 178 SLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGME 237

Query: 226 KNDLASTVIYLISDGSRYM 244
            + + + VI  +     ++
Sbjct: 238 PDVIGARVIEAMKANRLHI 256

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 65.9 bits (161), Expect = 2e-12
 Identities = 57/257 (22%), Positives = 105/257 (40%), Gaps = 34/257 (13%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEV 60
           +  + K VL+T  G  + K  A   AK G + V+V + +  +   +++     GG+    
Sbjct: 318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAK-VVVNDFKDATKTVDEIKA--AGGEAWPD 374

Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKIN 118
              D+ +D E      +DK     G +D  V+     G ++D    ++ + E+  + +++
Sbjct: 375 QH-DVAKDSEAIIKNVIDK----YGTIDILVNN---AGILRDRSFAKMSKQEWDSVQQVH 426

Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY--PGAAAYGACAASIHQLVRTA 176
            +  + L +       E +  G I+ +TS  G    +Y   G A Y +  A I  L +T 
Sbjct: 427 LIGTFNLSRLAWPYFVEKQ-FGRIINITSTSG----IYGNFGQANYSSSKAGILGLSKTM 481

Query: 177 AMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL 236
           A+E  K+ I+VN +A         P A         +               +A  ++YL
Sbjct: 482 AIEGAKNNIKVNIVA---------PHAET--AMTLSIMREQDK-NLYHADQ-VAPLLVYL 528

Query: 237 ISDGSRYMTGTTIYVDG 253
            +D    +TG T  + G
Sbjct: 529 GTDDV-PVTGETFEIGG 544

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 64.3 bits (157), Expect = 6e-12
 Identities = 52/249 (20%), Positives = 100/249 (40%), Gaps = 40/249 (16%)

Query: 17  ISKNIAFHLAKRGCRLVL------VGNERRLSSVAEKMMGSLK--GGQPVEVVGLDMEED 68
           + K  +   AK G ++V+      +  +   S  A+ ++  +   GG  V     +   D
Sbjct: 20  LGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADY--NNVLD 77

Query: 69  REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLL 126
            +   + AV       G +   ++     G ++D    ++ E ++K ++ ++    + + 
Sbjct: 78  GDKIVETAVKN----FGTVHVIINN---AGILRDASMKKMTEKDYKLVIDVHLNGAFAVT 130

Query: 127 KAVGRRMKESKAGGSIVFLTSIIGAERGLY--PGAAAYGACAASIHQLVRTAAMEIGKHK 184
           KA     ++ K  G IV  +S  G    LY   G A Y +  +++     T A E  K+ 
Sbjct: 131 KAAWPYFQKQK-YGRIVNTSSPAG----LYGNFGQANYASAKSALLGFAETLAKEGAKYN 185

Query: 185 IRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
           I+ N IA         P+A  + R  + +     L + L  +  +A  V+YL S  +  +
Sbjct: 186 IKANAIA---------PLA--RSRMTESIMPPPMLEK-LGPE-KVAPLVLYLSSAEN-EL 231

Query: 245 TGTTIYVDG 253
           TG    V  
Sbjct: 232 TGQFFEVAA 240

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 64.1 bits (157), Expect = 2e-12
 Identities = 54/242 (22%), Positives = 98/242 (40%), Gaps = 28/242 (11%)

Query: 4   QAKRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEV 60
             K +L+T  S G  I + IA  L   G +++L    + R+ ++A ++  +   G     
Sbjct: 3   MDKVILITGASGG--IGEGIARELGVAGAKILLGARRQARIEAIATEIRDA---GGTALA 57

Query: 61  VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM-QDPLQVGE-DEFKKLVKIN 118
             LD+  DR  +       A    G +D  V+     G M   PL   + DE+++++ +N
Sbjct: 58  QVLDV-TDRH-SVAAFAQAAVDTWGRIDVLVNN---AGVMPLSPLAAVKVDEWERMIDVN 112

Query: 119 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAM 178
                + + AV   M+  ++ G I+ + SI      + P AA Y A   ++  +  +  +
Sbjct: 113 IKGVLWGIGAVLPIMEAQRS-GQIINIGSIGA--LSVVPTAAVYCATKFAVRAI--SDGL 167

Query: 179 EIGKHKIRVNGIARGLHLQDEYP--IAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL 236
                 IRV  +  G+ ++ E    I   +  A      A  L        D+A  V  +
Sbjct: 168 RQESTNIRVTCVNPGV-VESELAGTITHEETMAAMDTYRAIALQ-----PADIARAVRQV 221

Query: 237 IS 238
           I 
Sbjct: 222 IE 223

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 62.4 bits (152), Expect = 1e-11
 Identities = 53/259 (20%), Positives = 99/259 (38%), Gaps = 42/259 (16%)

Query: 8   VLLTSDGDEISKNIAFHLAKRGCRLVL------VGNERRLSSVAEKMMGSLK--GGQPVE 59
           VL+T  G  + +  A   A+RG  +V+           + SS A+K++  ++  GG+ V 
Sbjct: 12  VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVA 71

Query: 60  VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKI 117
                     E   ++ V  A    G +D  V+     G ++D    ++ ++++  + ++
Sbjct: 72  NYD-----SVEAG-EKLVKTALDTFGRIDVVVNN---AGILRDRSFSRISDEDWDIIQRV 122

Query: 118 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY--PGAAAYGACAASIHQLVRT 175
           +    + + +A    MK+ +  G I+   S      G+Y   G A Y A    +  L  T
Sbjct: 123 HLRGSFQVTRAAWDHMKK-QNYGRIIMTAS----ASGIYGNFGQANYSAAKLGLLGLANT 177

Query: 176 AAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVK-NDLASTVI 234
             +E  K+ I  N IA         P A       ++     P      +K   +A  V+
Sbjct: 178 LVIEGRKNNIHCNTIA---------PNA-----GSRMTETVMPEDLVEALKPEYVAPLVL 223

Query: 235 YLISDGSRYMTGTTIYVDG 253
           +L  +      G    V  
Sbjct: 224 WLCHESC-EENGGLFEVGA 241

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 59.9 bits (146), Expect = 4e-11
 Identities = 41/223 (18%), Positives = 77/223 (34%), Gaps = 40/223 (17%)

Query: 7   RVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGL 63
           RVL+T  + G  +    A  L   G  L+L G     L+ +A ++            +  
Sbjct: 2   RVLITGATGG--LGGAFARALK--GHDLLLSGRRAGALAELAREV--------GARALPA 49

Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVA 121
           D+ ++             +  G LD  VH         +++    G D  ++++  + + 
Sbjct: 50  DLADE------LEAKALLEEAGPLDLLVHAVGKAGRASVRE---AGRDLVEEMLAAHLLT 100

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
             F+L    +  +  K G   VF  +         PG AAY A   ++   +  A  E+ 
Sbjct: 101 AAFVL----KHARFQK-GARAVFFGAYPR--YVQVPGFAAYAAAKGALEAYLEAARKELL 153

Query: 182 KHKIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAA 217
           +  + +  +            L      A+  E A + V E  
Sbjct: 154 REGVHLVLVRLPAVATGLWAPLGGPPKGALSPEEAARKVLEGL 196

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 59.5 bits (144), Expect = 2e-10
 Identities = 44/239 (18%), Positives = 78/239 (32%), Gaps = 60/239 (25%)

Query: 70  EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDP-LQVGEDEFKKLVKI---NFVAPWFL 125
               ++  +   Q  G ++  VH      ++Q   L      +   +     + ++   L
Sbjct: 97  NYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLIS---L 153

Query: 126 LKAVGRRMKESKAGGSIVFLTSIIGAERGL--YPGAAAYGACAASIHQLVRTAAMEIG-K 182
            K     MK      SI+ LT    +++ +  Y G     +  A++    R  A  +G  
Sbjct: 154 CKYFVNIMKP---QSSIISLT-YHASQKVVPGYGGGM--SSAKAALESDTRVLAYHLGRN 207

Query: 183 HKIRVNGI---------ARGL----------------------------------HLQDE 199
           + IR+N I         A  +                                       
Sbjct: 208 YNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISA 267

Query: 200 YPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 258
                  + A++   + APL + L    D+ S   +L+S  SR +TG TIYVD   +I 
Sbjct: 268 SQNYTFIDYAIEYSEKYAPLRQKLLS-TDIGSVASFLLSRESRAITGQTIYVDNGLNIM 325

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 58.8 bits (143), Expect = 2e-10
 Identities = 52/256 (20%), Positives = 91/256 (35%), Gaps = 38/256 (14%)

Query: 1   MEN-QAKRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQ 56
           ME  + +  L+T  S G  I   +A  L ++G ++V        +  +A +   +   G 
Sbjct: 27  MERWRDRLALVTGASGG--IGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGT 84

Query: 57  PVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM-QDPLQVGE-DEFK 112
            +     D+  EED    F     +       +D  ++     G    D L  G    +K
Sbjct: 85  -LIPYRCDLSNEEDILSMFSAIRSQ----HSGVDICINN---AGLARPDTLLSGSTSGWK 136

Query: 113 KLVKINFVAPWFLLKAVGRRMKESKAG-GSIVFLTSIIGAERGLYPGAAAYGACAASIHQ 171
            +  +N +A     +   + MKE     G I+ + S+ G           Y A   ++  
Sbjct: 137 DMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTA 196

Query: 172 LVRTAAMEIG--KHKIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRW 222
           L      E+   +  IR   I+ G+        L D+       E+A     +   L   
Sbjct: 197 LTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDK-----DPEKAAATYEQMKCLK-- 249

Query: 223 LDVKNDLASTVIYLIS 238
                D+A  VIY++S
Sbjct: 250 ---PEDVAEAVIYVLS 262

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 58.4 bits (142), Expect = 2e-10
 Identities = 39/162 (24%), Positives = 66/162 (40%), Gaps = 14/162 (8%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           + VL+T  G  I +  A+  AK   +LVL   N+  L   A K  G    G  V    +D
Sbjct: 32  EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL---GAKVHTFVVD 88

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
              +RE     +  K    +G++   V+     Y   +       + + +K  ++N +A 
Sbjct: 89  CS-NRE-DIYSSAKKVKAEIGDVSILVNNAGVVYTSDL---FATQDPQIEKTFEVNVLAH 143

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA 164
           ++  KA    M ++   G IV + S  G    + P   AY +
Sbjct: 144 FWTTKAFLPAMTKNN-HGHIVTVASAAG-HVSV-PFLLAYCS 182

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 58.4 bits (142), Expect = 3e-10
 Identities = 45/191 (23%), Positives = 77/191 (40%), Gaps = 19/191 (9%)

Query: 1   MENQAKRVLLT--SDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPV 58
           M   AK  L+T  S G    + IA      G  ++  G  RR  ++ +     L    P 
Sbjct: 1   MSESAKVWLVTGASSG--FGRAIAEAAVAAGDTVI--GTARRTEALDD-----LVAAYPD 51

Query: 59  EVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVK 116
               + ++       D          G +D  V+    T  G  ++     E E + L +
Sbjct: 52  RAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEE---TTERELRDLFE 108

Query: 117 INFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTA 176
           ++   P  L +A+  +M+E    GS+V ++S  G  +  + G +AY A  A++ QL    
Sbjct: 109 LHVFGPARLTRALLPQMRERG-SGSVVNISSFGG--QLSFAGFSAYSATKAALEQLSEGL 165

Query: 177 AMEIGKHKIRV 187
           A E+    I+V
Sbjct: 166 ADEVAPFGIKV 176

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 57.1 bits (138), Expect = 1e-09
 Identities = 35/196 (17%), Positives = 77/196 (39%), Gaps = 26/196 (13%)

Query: 8   VLLTSDGDEISKNIAFHLAKRGCRLVL------VGNERRLSSVAEKMMGSLK--GGQPVE 59
            ++T  G  + +  A   A+RG ++V+         +      A+ ++  ++  GG+ V 
Sbjct: 22  AVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVA 81

Query: 60  VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDP--LQVGEDEFKKLVKI 117
                          + ++ A +  G +D  V+     G ++D   ++  E ++  +  +
Sbjct: 82  DYN-----SVIDG-AKVIETAIKAFGRVDILVNN---AGILRDRSLVKTSEQDWNLVNDV 132

Query: 118 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY--PGAAAYGACAASIHQLVRT 175
           +    +   +A    MK+ +  G I+  +S      G+Y   G   Y A    +  L  T
Sbjct: 133 HLKGSFKCTQAAFPYMKK-QNYGRIIMTSS----NSGIYGNFGQVNYTAAKMGLIGLANT 187

Query: 176 AAMEIGKHKIRVNGIA 191
            A+E  ++ +  N I 
Sbjct: 188 VAIEGARNNVLCNVIV 203

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 52.8 bits (127), Expect = 2e-08
 Identities = 23/146 (15%), Positives = 58/146 (39%), Gaps = 15/146 (10%)

Query: 58  VEVVGLDMEEDREGAFDEAVDKACQILGN--LDAFVHCYTYEGKMQDPLQVGEDEFKKLV 115
           + ++ +D+      A+D+ V     +  +  L+   +      K      V   E    +
Sbjct: 74  IHILEIDL--RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTL 131

Query: 116 KINFVAPWFLLKAVGRRMKESKA----------GGSIVFLTSIIGA-ERGLYPGAAAYGA 164
           + N V P  L KA    +K++              +I+ ++SI+G+ +     G  AY  
Sbjct: 132 QTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRT 191

Query: 165 CAASIHQLVRTAAMEIGKHKIRVNGI 190
             ++++   ++ ++++   +I    +
Sbjct: 192 SKSALNAATKSLSVDLYPQRIMCVSL 217

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 52.3 bits (126), Expect = 3e-08
 Identities = 28/187 (14%), Positives = 65/187 (34%), Gaps = 22/187 (11%)

Query: 21  IAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA 80
           +   L K      ++   R +    E    S+K  + V V+ L +    + + D  V K 
Sbjct: 19  LVQQLVKDKNIRHIIATARDVEKATELK--SIKDSR-VHVLPLTV--TCDKSLDTFVSKV 73

Query: 81  CQILGN--LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA 138
            +I+G+  L   ++            +       + + +N  +   L + +   +K + +
Sbjct: 74  GEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAAS 133

Query: 139 ----------GGSIVFLTSIIG-----AERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 183
                       +++ ++S +G               AY    A+I+   RT A+++   
Sbjct: 134 KESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDD 193

Query: 184 KIRVNGI 190
            + V   
Sbjct: 194 NVLVVNF 200

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 50.9 bits (122), Expect = 1e-07
 Identities = 41/196 (20%), Positives = 79/196 (40%), Gaps = 20/196 (10%)

Query: 1   MENQAKRVLLT--SDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKG---- 54
           M    K +L+T  S G    +  A  LA  G R+    + R +       + ++ G    
Sbjct: 1   MVMSKKIILITGASSG--FGRLTAEALAGAGHRVY--ASMRDIVGRNASNVEAIAGFARD 56

Query: 55  -GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEF 111
               +  + LD+    + + D A+D+     G +D  +H   +   G  +       ++F
Sbjct: 57  NDVDLRTLELDV--QSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEA---FTPEQF 111

Query: 112 KKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQ 171
            +L  IN ++   + +A    M+  K  G +++++S   A  G  P  A Y A  A++  
Sbjct: 112 AELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSA-GGTPPYLAPYFAAKAAMDA 169

Query: 172 LVRTAAMEIGKHKIRV 187
           +    A E+ +  I  
Sbjct: 170 IAVQYARELSRWGIET 185

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	266
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.97
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.97
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.96
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.96
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.94
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.93
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.93
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.93
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.92
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.92
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.92
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.92
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.92
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.91
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.91
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.91
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.91
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.91
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.91
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.9
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.9
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.9
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.9
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.89
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.89
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.89
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.89
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.89
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.88
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.88
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.88
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.88
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.88
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.88
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.88
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.88
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.87
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.87
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.87
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.87
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.87
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.87
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.87
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.87
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.87
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.87
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.86
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.86
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.86
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.85
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.85
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.85
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.85
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.85
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.85
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.84
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.84
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.84
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.84
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.84
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.83
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.83
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.83
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.83
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.83
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.82
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.82
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.82
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.81
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.81
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.8
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.8
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.79
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.79
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.78
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.77
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.77
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.77
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.77
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.77
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.76
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.75
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.74
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.73
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.7
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.7
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.66
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.65
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.65
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.64
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.61
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.57
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.56
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.55
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.53
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.53
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.36
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.32
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.1
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.06
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.97
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.72
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.69
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.56
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.53
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.48
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.46
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.43
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.4
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.37
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.37
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.3
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.29
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.28
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.21
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.2
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.19
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.19
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.18
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.16
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.14
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.14
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.11
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.11
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.1
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.09
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.03
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.99
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.96
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.96
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.95
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.95
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.92
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.88
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.87
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.85
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.84
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.8
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.77
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.76
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.75
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.73
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.71
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.65
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.64
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.61
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.59
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.59
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.58
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.56
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.47
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.45
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.45
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.43
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.42
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.42
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.42
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.41
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.39
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.38
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.36
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.35
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.33
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.32
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.3
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.27
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.25
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.2
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.19
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.19
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.18
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.17
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.16
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.15
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.12
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.08
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.05
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.03
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.99
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.97
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.96
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	96.95
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.91
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.9
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.87
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.86
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.86
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.86
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.84
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.83
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.82
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.82
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.81
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.81
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.81
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.8
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.8
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.79
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.78
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.78
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.77
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.76
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.75
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.73
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.7
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.65
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.64
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.63
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.61
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.61
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.6
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.56
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.55
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.51
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.51
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.48
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.47
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.47
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.4
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.36
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.35
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.35
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.32
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.31
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.31
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.28
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.27
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.26
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.25
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.25
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.21
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.17
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.15
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.13
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.12
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.1
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.09
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.09
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.06
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.02
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.02
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.02
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.0
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	95.98
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.92
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	95.91
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	95.89
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	95.88
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.85
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	95.84
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	95.82
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	95.82
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.75
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	95.75
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.73
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	95.7
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	95.65
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.64
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	95.63
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	95.6
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.5
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	95.49
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.47
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	95.46
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	95.41
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.35
3fef_A	450	Putative glucosidase LPLD; gulosidase, structural	95.29
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.28
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	95.24
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	95.23
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	95.22
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	95.21
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.16
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	95.15
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	95.06
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	95.05
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.01
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.01
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	94.99
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	94.91
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	94.88
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	94.86

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=3.7e-61  Score=395.86  Aligned_cols=248  Identities=21%  Similarity=0.301  Sum_probs=227.0

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |+|+||++|||||++|||+++|++|+++|++|++++ +.++++++.+++.+.   +.++.++.+|+++++  ++++++++
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~---g~~~~~~~~Dvt~~~--~v~~~~~~   77 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM---GKEVLGVKADVSKKK--DVEEFVRR   77 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTSHH--HHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEccCCCHH--HHHHHHHH
Confidence            689999999999999999999999999999999999 888889999988765   578999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.++||+||++|||||+.....++.+.+.++|++++++|+.++|+++|+++|+|++++ +|+||+|||.++..+  .++.
T Consensus        78 ~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~~--~~~~  154 (254)
T 4fn4_A           78 TFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIRG--GFAG  154 (254)
T ss_dssp             HHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCS--SSSC
T ss_pred             HHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcCC--CCCC
Confidence            9999999999999999865667899999999999999999999999999999999887 799999999999887  6889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccH--HHHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE--RAVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      .+|+++|+|+.+|+|+++.|++++|||||+|+||+|+||+......++  ..........|++|+++|+ |+|+.++||+
T Consensus       155 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pe-diA~~v~fLa  233 (254)
T 4fn4_A          155 APYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPE-DIANVIVFLA  233 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHH-HHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHH-HHHHHHHHHh
Confidence            999999999999999999999999999999999999999876654332  2333344567889999998 9999999999


Q ss_pred             cCCCCcccccEEEEcCCccc
Q 024517          238 SDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       238 s~~~~~~~G~~i~~dgG~~~  257 (266)
                      |+.++|+|||.|.+|||+++
T Consensus       234 Sd~a~~iTG~~i~VDGG~t~  253 (254)
T 4fn4_A          234 SDEASFVNGDAVVVDGGLTV  253 (254)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CchhcCCcCCEEEeCCCccc
Confidence            99999999999999999986

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=4e-61  Score=395.88  Aligned_cols=247  Identities=23%  Similarity=0.362  Sum_probs=231.2

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |+|+||++|||||++|||+++|++|+++|++|++++ +.+++++..+++.+.   +.++..+.+|+++++  ++++++++
T Consensus         5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~---g~~~~~~~~Dv~~~~--~v~~~~~~   79 (255)
T 4g81_D            5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK---GYDAHGVAFDVTDEL--AIEAAFSK   79 (255)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT---TCCEEECCCCTTCHH--HHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEeeCCCHH--HHHHHHHH
Confidence            368999999999999999999999999999999999 778888888888765   568999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.++||+||++|||||. ....++.+.+.++|++++++|+.++|+++|+++|+|.+++.+|+||+|||..+..+  .++.
T Consensus        80 ~~~~~G~iDiLVNNAG~-~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~--~~~~  156 (255)
T 4g81_D           80 LDAEGIHVDILINNAGI-QYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAA--RPTV  156 (255)
T ss_dssp             HHHTTCCCCEEEECCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSB--CTTC
T ss_pred             HHHHCCCCcEEEECCCC-CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCC--CCCc
Confidence            99999999999999998 56789999999999999999999999999999999977654799999999999877  6899


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|+|+.+|+|+++.|++++|||||+|+||+|+||+......+++..+.+....|++|+++|+ |+|+.++||+|+
T Consensus       157 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe-diA~~v~fL~S~  235 (255)
T 4g81_D          157 APYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPE-ELIGTAIFLSSK  235 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGG-GGHHHHHHHHSG
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHH-HHHHHHHHHhCc
Confidence            9999999999999999999999999999999999999999887777777788888999999999998 999999999999


Q ss_pred             CCCcccccEEEEcCCcc
Q 024517          240 GSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~  256 (266)
                      .++|+|||.|.+|||++
T Consensus       236 ~a~~iTG~~i~VDGG~~  252 (255)
T 4g81_D          236 ASDYINGQIIYVDGGWL  252 (255)
T ss_dssp             GGTTCCSCEEEESTTGG
T ss_pred             hhCCCcCCEEEECCCeE
Confidence            99999999999999975

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.3e-58  Score=377.61  Aligned_cols=241  Identities=20%  Similarity=0.306  Sum_probs=218.3

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++|+||++|||||++|||+++|++|+++|++|+++++.. .++..+++.+.   +.++..+.+|++|++  +++++++  
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~-~~~~~~~~~~~---g~~~~~~~~Dv~d~~--~v~~~~~--   76 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRA-PDETLDIIAKD---GGNASALLIDFADPL--AAKDSFT--   76 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC-CHHHHHHHHHT---TCCEEEEECCTTSTT--TTTTSST--
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCc-HHHHHHHHHHh---CCcEEEEEccCCCHH--HHHHHHH--
Confidence            468999999999999999999999999999999999443 25666666654   578999999999998  8877764  


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                         +++||++|||||+ ....++.+.+.++|++++++|+.++|+++|+++|+|.+++++|+||+|||..+..+  .++..
T Consensus        77 ---~g~iDiLVNNAGi-~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g--~~~~~  150 (247)
T 4hp8_A           77 ---DAGFDILVNNAGI-IRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQG--GIRVP  150 (247)
T ss_dssp             ---TTCCCEEEECCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC--CSSCH
T ss_pred             ---hCCCCEEEECCCC-CCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCC--CCCCh
Confidence               5899999999998 46688999999999999999999999999999999987755799999999999887  68999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      +|++||+|+.+|+|+++.||+++|||||+|+||+|+||+......++...+.+.+.+|++|+++|+ |+|..++||+|+.
T Consensus       151 ~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~pe-eiA~~v~fLaSd~  229 (247)
T 4hp8_A          151 SYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSE-DIAGAAVFLSSAA  229 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTH-HHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHH-HHHHHHHHHhCch
Confidence            999999999999999999999999999999999999999887766666677788899999999998 9999999999999


Q ss_pred             CCcccccEEEEcCCcc
Q 024517          241 SRYMTGTTIYVDGAQS  256 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~  256 (266)
                      ++|+|||.|.+|||++
T Consensus       230 a~~iTG~~i~VDGG~~  245 (247)
T 4hp8_A          230 ADYVHGAILNVDGGWL  245 (247)
T ss_dssp             GTTCCSCEEEESTTGG
T ss_pred             hcCCcCCeEEECcccc
Confidence            9999999999999975

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=1.2e-57  Score=376.63  Aligned_cols=250  Identities=20%  Similarity=0.294  Sum_probs=217.3

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      |+|+||++|||||++|||+++|++|+++|++|+++++.+...+..+++.+.   +.++.++.+|+++++  +++++++++
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~--~v~~~v~~~   77 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQR---QPRATYLPVELQDDA--QCRDAVAQT   77 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHH---CTTCEEEECCTTCHH--HHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhc---CCCEEEEEeecCCHH--HHHHHHHHH
Confidence            568999999999999999999999999999999999444444555555544   468999999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .++||+||++|||||+. . ..+.+.+.++|++.+++|+.++++++|+++|+|+++  +|+||+|||..+..+  .++..
T Consensus        78 ~~~~G~iDiLVNnAGi~-~-~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~~~~--~~~~~  151 (258)
T 4gkb_A           78 IATFGRLDGLVNNAGVN-D-GIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT--RGAIVNISSKTAVTG--QGNTS  151 (258)
T ss_dssp             HHHHSCCCEEEECCCCC-C-CCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCTHHHHC--CSSCH
T ss_pred             HHHhCCCCEEEECCCCC-C-CCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCeEEEEeehhhccC--CCCch
Confidence            99999999999999983 3 344578999999999999999999999999999765  499999999999887  68999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----cHHHHHHHhhccCCC-CCCCChhhHHHHHHH
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKLVREAAPLH-RWLDVKNDLASTVIY  235 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~  235 (266)
                      .|+++|+|+.+|+|+++.|++++|||||+|+||+|+||+......    ++..........|++ |+++|+ |+|+.++|
T Consensus       152 ~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~pe-eiA~~v~f  230 (258)
T 4gkb_A          152 GYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPD-EIADTAVF  230 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHH-HHHHHHHH
Confidence            999999999999999999999999999999999999999876432    233455667788985 899998 99999999


Q ss_pred             HccCCCCcccccEEEEcCCccccCCCc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      |+|+.++|+|||.|.+|||++..++.+
T Consensus       231 LaS~~a~~iTG~~i~VDGG~T~l~~s~  257 (258)
T 4gkb_A          231 LLSPRASHTTGEWLFVDGGYTHLDRAL  257 (258)
T ss_dssp             HHSGGGTTCCSCEEEESTTTTTSCTTC
T ss_pred             HhCchhcCccCCeEEECCCcchhhhhh
Confidence            999999999999999999999777654

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=3.1e-58  Score=381.94  Aligned_cols=240  Identities=20%  Similarity=0.314  Sum_probs=214.6

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      |+||++|||||++|||+++|++|+++|++|++++ +.+++++..+++      +.++..+.+|++|++  +++++++++.
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~------g~~~~~~~~Dv~~~~--~v~~~~~~~~   98 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI------GGGAVGIQADSANLA--ELDRLYEKVK   98 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------CTTCEEEECCTTCHH--HHHHHHHHHH
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc------CCCeEEEEecCCCHH--HHHHHHHHHH
Confidence            7899999999999999999999999999999999 777777776665      367889999999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      ++||+||+||||||. ....++.+.+.++|++++++|+.++|+++|+++|+|++   +|+||+++|..+..+  .++..+
T Consensus        99 ~~~G~iDiLVNNAG~-~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~---~G~IInisS~~~~~~--~~~~~~  172 (273)
T 4fgs_A           99 AEAGRIDVLFVNAGG-GSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR---GSSVVLTGSTAGSTG--TPAFSV  172 (273)
T ss_dssp             HHHSCEEEEEECCCC-CCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCGGGGSC--CTTCHH
T ss_pred             HHcCCCCEEEECCCC-CCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCeEEEEeehhhccC--CCCchH
Confidence            999999999999998 56789999999999999999999999999999999965   589999999999877  689999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-----cHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-----QERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      |+++|+|+.+|+|+++.|++++|||||+|+||+|+||++.....     .+...+.+....|++|+++|+ |+|++++||
T Consensus       173 Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe-eiA~~v~FL  251 (273)
T 4fgs_A          173 YAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAE-EVAAAALFL  251 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHH-HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHH-HHHHHHHHH
Confidence            99999999999999999999999999999999999998766543     233445667889999999998 999999999


Q ss_pred             ccCCCCcccccEEEEcCCccc
Q 024517          237 ISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +|+.++|+|||.|.+|||.+.
T Consensus       252 aSd~a~~iTG~~i~VDGG~s~  272 (273)
T 4fgs_A          252 ASDDSSFVTGAELFVDGGSAQ  272 (273)
T ss_dssp             HSGGGTTCCSCEEEESTTTTT
T ss_pred             hCchhcCccCCeEeECcChhh
Confidence            999999999999999999874

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=1.8e-56  Score=364.23  Aligned_cols=231  Identities=24%  Similarity=0.370  Sum_probs=204.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++||++|||||++|||+++|++|+++|++|++++ +.+.+++       .  .+.++..+.+|++|++  +++++++   
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~-------~--~~~~~~~~~~Dv~~~~--~v~~~~~---   74 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA-------P--RHPRIRREELDITDSQ--RLQRLFE---   74 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS-------C--CCTTEEEEECCTTCHH--HHHHHHH---
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh-------h--hcCCeEEEEecCCCHH--HHHHHHH---
Confidence            3799999999999999999999999999999999 5554432       1  1368999999999988  8877764   


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                       +||+||+||||||+.   .++.+.+.++|++++++|+.++++++|+++|+|+++  +|+||+|||..+..+  .++..+
T Consensus        75 -~~g~iDiLVNNAGi~---~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~~~~--~~~~~~  146 (242)
T 4b79_A           75 -ALPRLDVLVNNAGIS---RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR--GGSILNIASMYSTFG--SADRPA  146 (242)
T ss_dssp             -HCSCCSEEEECCCCC---CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--CEEEEEECCGGGTSC--CSSCHH
T ss_pred             -hcCCCCEEEECCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCeEEEEeeccccCC--CCCCHH
Confidence             579999999999974   456788999999999999999999999999999765  499999999999887  689999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCC
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS  241 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  241 (266)
                      |++||+|+.+|+|+++.||+++|||||+|+||+|+||+......+++..+.+.+..|++|+++|+ |+|+.++||+|+.+
T Consensus       147 Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~pe-eiA~~v~fLaSd~a  225 (242)
T 4b79_A          147 YSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAP-EVASAAAFLCGPGA  225 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHH-HHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCchh
Confidence            99999999999999999999999999999999999999887776777778888999999999998 99999999999999


Q ss_pred             CcccccEEEEcCCcc
Q 024517          242 RYMTGTTIYVDGAQS  256 (266)
Q Consensus       242 ~~~~G~~i~~dgG~~  256 (266)
                      +|+|||.|.+|||+.
T Consensus       226 ~~iTG~~l~VDGG~l  240 (242)
T 4b79_A          226 SFVTGAVLAVDGGYL  240 (242)
T ss_dssp             TTCCSCEEEESTTGG
T ss_pred             cCccCceEEECccHh
Confidence            999999999999975

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=2.4e-55  Score=364.37  Aligned_cols=248  Identities=23%  Similarity=0.273  Sum_probs=224.3

Q ss_pred             CCCCCcEEEEecCCC--chHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHH
Q 024517            1 MENQAKRVLLTSDGD--EISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAV   77 (266)
Q Consensus         1 m~l~~k~vlItGa~~--giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~   77 (266)
                      |+|+||++|||||++  |||+++|++|+++|++|++++ +.+.++++.+.+.+..  +.++.++.+|+++++  ++++++
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~--~v~~~~   77 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN--QPEAHLYQIDVQSDE--EVINGF   77 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT--CSSCEEEECCTTCHH--HHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CCcEEEEEccCCCHH--HHHHHH
Confidence            789999999999865  999999999999999999999 6667777777776542  357899999999999  999999


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCC---CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC
Q 024517           78 DKACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG  154 (266)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~  154 (266)
                      +++.++||+||++|||||+...   ..++.+.+.++|+..+++|+.+++.+++.+.++|++   +|+||++||..+..+ 
T Consensus        78 ~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~G~IVnisS~~~~~~-  153 (256)
T 4fs3_A           78 EQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE---GGSIVATTYLGGEFA-  153 (256)
T ss_dssp             HHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT---CEEEEEEECGGGTSC-
T ss_pred             HHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCEEEEEeccccccC-
Confidence            9999999999999999997432   245667889999999999999999999999987764   699999999999887 


Q ss_pred             CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHH
Q 024517          155 LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI  234 (266)
Q Consensus       155 ~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (266)
                       .+++..|+++|+|+.+|+|+++.|++++|||||+|+||+|+|++.......++..+.+.+..|++|+++|+ |+|+.++
T Consensus       154 -~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe-evA~~v~  231 (256)
T 4fs3_A          154 -VQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQV-EVGKTAA  231 (256)
T ss_dssp             -CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHH-HHHHHHH
T ss_pred             -cccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHH-HHHHHHH
Confidence             68999999999999999999999999999999999999999999887766677778888999999999998 9999999


Q ss_pred             HHccCCCCcccccEEEEcCCcccc
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      ||+|+.++|+|||+|.+|||++..
T Consensus       232 fL~Sd~a~~iTG~~i~VDGG~~av  255 (256)
T 4fs3_A          232 YLLSDLSSGVTGENIHVDSGFHAI  255 (256)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHhCchhcCccCCEEEECcCHHhc
Confidence            999999999999999999999865

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=1.1e-54  Score=356.00  Aligned_cols=230  Identities=23%  Similarity=0.321  Sum_probs=204.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +|++|||||++|||+++|++|+++|++|++++ +.++++++.    +.   +.++.++.+|++|++  +++++++++.++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~----~~---~~~~~~~~~Dv~~~~--~v~~~v~~~~~~   72 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA----KE---RPNLFYFHGDVADPL--TLKKFVEYAMEK   72 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----TT---CTTEEEEECCTTSHH--HHHHHHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hh---cCCEEEEEecCCCHH--HHHHHHHHHHHH
Confidence            39999999999999999999999999999999 544443332    22   368899999999999  999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhH
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG  163 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~  163 (266)
                      ||+||+||||||. ....++.+.+.++|++++++|+.++++++|.++|+|.++  +|+||+|||..+..+  .++..+|+
T Consensus        73 ~g~iDiLVNNAG~-~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~--~G~IInisS~~~~~~--~~~~~~Y~  147 (247)
T 3ged_A           73 LQRIDVLVNNACR-GSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN--KGRIINIASTRAFQS--EPDSEAYA  147 (247)
T ss_dssp             HSCCCEEEECCCC-CCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEECCGGGTSC--CTTCHHHH
T ss_pred             cCCCCEEEECCCC-CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCcEEEEeecccccC--CCCCHHHH
Confidence            9999999999998 566889999999999999999999999999999999875  499999999999877  68999999


Q ss_pred             HhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCc
Q 024517          164 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY  243 (266)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  243 (266)
                      +||+|+.+|+|+++.|+++ |||||+|+||+|+|++..+.      .+...+.+|++|+++|+ |+|++++||+|+  +|
T Consensus       148 asKaal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~------~~~~~~~~Pl~R~g~pe-diA~~v~fL~s~--~~  217 (247)
T 3ged_A          148 SAKGGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEF------TQEDCAAIPAGKVGTPK-DISNMVLFLCQQ--DF  217 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---C------CHHHHHTSTTSSCBCHH-HHHHHHHHHHHC--SS
T ss_pred             HHHHHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHH------HHHHHhcCCCCCCcCHH-HHHHHHHHHHhC--CC
Confidence            9999999999999999997 99999999999999986543      23345678999999998 999999999984  69


Q ss_pred             ccccEEEEcCCcccc
Q 024517          244 MTGTTIYVDGAQSIT  258 (266)
Q Consensus       244 ~~G~~i~~dgG~~~~  258 (266)
                      +|||.|.+|||++..
T Consensus       218 iTG~~i~VDGG~s~r  232 (247)
T 3ged_A          218 ITGETIIVDGGMSKR  232 (247)
T ss_dssp             CCSCEEEESTTGGGC
T ss_pred             CCCCeEEECcCHHHh
Confidence            999999999998864

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=1e-54  Score=360.07  Aligned_cols=241  Identities=18%  Similarity=0.207  Sum_probs=209.4

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      |+|+||++|||||++|||+++|++|+++|++|+++++.+. +    .       ..+..++.+|+++++  +++++++++
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~-~----~-------~~~~~~~~~Dv~~~~--~v~~~~~~~   72 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARP-E----G-------LPEELFVEADLTTKE--GCAIVAEAT   72 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCC-T----T-------SCTTTEEECCTTSHH--HHHHHHHHH
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCch-h----C-------CCcEEEEEcCCCCHH--HHHHHHHHH
Confidence            5789999999999999999999999999999999994322 1    0       134457899999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCC-CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           81 CQILGNLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      .++||+||++|||||.... ..++.+.+.++|++.+++|+.++++++|+++|+|++++ .|+||++||..+..+. ..+.
T Consensus        73 ~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~~~~-~~~~  150 (261)
T 4h15_A           73 RQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRVLPL-PEST  150 (261)
T ss_dssp             HHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-TTTC
T ss_pred             HHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhccCC-CCcc
Confidence            9999999999999997433 35788999999999999999999999999999999887 7999999999987763 1367


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc------------cHHHHHHHhhccCCCCCCCChh
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG------------QERAVKLVREAAPLHRWLDVKN  227 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~  227 (266)
                      ..|+++|+|+.+|+|+++.|++++|||||+|+||+|+||+......            .++........+|++|+++|+ 
T Consensus       151 ~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe-  229 (261)
T 4h15_A          151 TAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPE-  229 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHH-
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHH-
Confidence            8999999999999999999999999999999999999998654321            122334445689999999998 


Q ss_pred             hHHHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          228 DLASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       228 dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      |+|+.++||+|+.++|+|||.|.+|||...+
T Consensus       230 evA~~v~fLaS~~a~~itG~~i~VDGG~v~T  260 (261)
T 4h15_A          230 EVANLIAFLASDRAASITGAEYTIDGGTVPT  260 (261)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTCSCC
T ss_pred             HHHHHHHHHhCchhcCccCcEEEECCcCccc
Confidence            9999999999999999999999999997543

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=4.4e-51  Score=340.84  Aligned_cols=249  Identities=27%  Similarity=0.401  Sum_probs=224.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++.+..  +.++.++.+|++|.+  ++++++++
T Consensus        16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~~~~--~v~~~~~~   91 (266)
T 4egf_A           16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF--GTDVHTVAIDLAEPD--APAELARR   91 (266)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--CCCEEEEECCTTSTT--HHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc--CCcEEEEEecCCCHH--HHHHHHHH
Confidence            467899999999999999999999999999999999 6677777777776532  368999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.++++++|+|.+++.+|+||++||..+..+  .++.
T Consensus        92 ~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~  168 (266)
T 4egf_A           92 AAEAFGGLDVLVNNAGIS-HPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAP--LPDH  168 (266)
T ss_dssp             HHHHHTSCSEEEEECCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC--CTTC
T ss_pred             HHHHcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccC--CCCC
Confidence            999999999999999984 5577888999999999999999999999999999987654689999999998877  6889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|+|++.|+++++.|++++|||||+|+||+|+|++.......+.....+....|++|+++|+ |+|+.++||+++
T Consensus       169 ~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dva~~v~~L~s~  247 (266)
T 4egf_A          169 YAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPH-EVSDAVVWLASD  247 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHH-HHHHHHHHHHSG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCc
Confidence            9999999999999999999999999999999999999998766554455556677889999999998 999999999999


Q ss_pred             CCCcccccEEEEcCCccc
Q 024517          240 GSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~  257 (266)
                      .++++|||+|.+|||.++
T Consensus       248 ~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          248 AASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             hhcCccCcEEEECCCccC
Confidence            999999999999999875

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=6.1e-51  Score=339.80  Aligned_cols=250  Identities=19%  Similarity=0.259  Sum_probs=220.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++....+ +.++.++.+|++|.+  ++++++++
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~--~v~~~~~~   80 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFP-GARLFASVCDVLDAL--QVRAFAEA   80 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHST-TCCEEEEECCTTCHH--HHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CceEEEEeCCCCCHH--HHHHHHHH
Confidence            568999999999999999999999999999999999 77777888888765433 246999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.+|++|++|||||. ....++.+.+.++|+..+++|+.+++.++++++|+|.+++ .|+||++||..+..+  .++.
T Consensus        81 ~~~~~g~id~lvnnAg~-~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~  156 (265)
T 3lf2_A           81 CERTLGCASILVNNAGQ-GRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA-DAAIVCVNSLLASQP--EPHM  156 (265)
T ss_dssp             HHHHHCSCSEEEECCCC-CCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-TEEEEEEEEGGGTSC--CTTB
T ss_pred             HHHHcCCCCEEEECCCC-CCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CeEEEEECCcccCCC--CCCc
Confidence            99999999999999998 4567888999999999999999999999999999998876 799999999999877  6889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--------cHHHHHHHhh--ccCCCCCCCChhhH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--------QERAVKLVRE--AAPLHRWLDVKNDL  229 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--------~~~~~~~~~~--~~~~~~~~~~~~dv  229 (266)
                      ..|+++|++++.|+++++.|++++|||||+|+||+|+|+++.....        .+........  ..|++|+++|+ |+
T Consensus       157 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dv  235 (265)
T 3lf2_A          157 VATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPI-EA  235 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHH-HH
T ss_pred             hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHH-HH
Confidence            9999999999999999999999999999999999999998765432        1222222222  28999999998 99


Q ss_pred             HHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          230 ASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       230 a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      |+.++||+|+.++++||+.|.+|||.+..
T Consensus       236 A~~v~fL~s~~~~~itG~~i~vdGG~~~~  264 (265)
T 3lf2_A          236 ARAILFLASPLSAYTTGSHIDVSGGLSRH  264 (265)
T ss_dssp             HHHHHHHHSGGGTTCCSEEEEESSSCCCC
T ss_pred             HHHHHHHhCchhcCcCCCEEEECCCCcCC
Confidence            99999999999999999999999998753

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=1.6e-50  Score=335.97  Aligned_cols=250  Identities=25%  Similarity=0.359  Sum_probs=224.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEE-e-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLV-G-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++|++|||||++|||+++|++|+++|++|+++ + +.+.+++..+++.+.   +.++.++.+|++|.+  +++++++++.
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~--~v~~~~~~~~   77 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL---GVKVLVVKANVGQPA--KIKEMFQQID   77 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT---TCCEEEEECCTTCHH--HHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCcEEEEEcCCCCHH--HHHHHHHHHH
Confidence            68999999999999999999999999999997 5 556667777777543   468999999999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.++++|++|||||. ....++.+.+.++|+..+++|+.+++.++++++|+|++++ .|+||++||..+..+  .++...
T Consensus        78 ~~~g~id~lv~nAg~-~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~--~~~~~~  153 (258)
T 3oid_A           78 ETFGRLDVFVNNAAS-GVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSIRY--LENYTT  153 (258)
T ss_dssp             HHHSCCCEEEECCCC-CCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGTSB--CTTCHH
T ss_pred             HHcCCCCEEEECCCC-CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhCCC--CCCcHH
Confidence            999999999999998 4567888899999999999999999999999999998876 799999999998877  688999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCC
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS  241 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  241 (266)
                      |+++|++++.|+++++.|++++|||||+|+||+|+|++.......++.........|.+|+++|+ |+|+.++||+|+.+
T Consensus       154 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~-dva~~v~~L~s~~~  232 (258)
T 3oid_A          154 VGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIK-DMVDTVEFLVSSKA  232 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHH-HHHHHHHHHTSSTT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCccc
Confidence            99999999999999999999999999999999999999877655555666677889999999998 99999999999999


Q ss_pred             CcccccEEEEcCCccccCCCcc
Q 024517          242 RYMTGTTIYVDGAQSITRPRMR  263 (266)
Q Consensus       242 ~~~~G~~i~~dgG~~~~~~~~~  263 (266)
                      +++||+.|.+|||.+...+...
T Consensus       233 ~~itG~~i~vdGG~~~~~~~~~  254 (258)
T 3oid_A          233 DMIRGQTIIVDGGRSLLVLEHH  254 (258)
T ss_dssp             TTCCSCEEEESTTGGGBCC---
T ss_pred             CCccCCEEEECCCccCCCCCCC
Confidence            9999999999999998877654

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=4.5e-51  Score=341.52  Aligned_cols=248  Identities=21%  Similarity=0.350  Sum_probs=225.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++...   +.++.++.+|++|.+  ++++++++
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~d~~--~v~~~~~~   96 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV---GHDAEAVAFDVTSES--EIIEAFAR   96 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT---TCCEEECCCCTTCHH--HHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEEcCCCCHH--HHHHHHHH
Confidence            467899999999999999999999999999999999 777778887777654   468999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||. ....++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..+  .++.
T Consensus        97 ~~~~~g~iD~lv~nAg~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~~~--~~~~  172 (271)
T 4ibo_A           97 LDEQGIDVDILVNNAGI-QFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSELA--RATV  172 (271)
T ss_dssp             HHHHTCCCCEEEECCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSB--CTTC
T ss_pred             HHHHCCCCCEEEECCCC-CCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCCC--CCCc
Confidence            99999999999999998 4557788899999999999999999999999999998876 699999999998877  6889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|+++++.|++++|||||+|+||+|+|++.......+..........|.+|+++|+ |+|+.++||+++
T Consensus       173 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dva~~v~~L~s~  251 (271)
T 4ibo_A          173 APYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQ-ELVGTAVFLSAS  251 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGG-GGHHHHHHHHSG
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCc
Confidence            9999999999999999999999999999999999999999876544455666777889999999998 999999999999


Q ss_pred             CCCcccccEEEEcCCcccc
Q 024517          240 GSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~  258 (266)
                      .++++|||.|.+|||.+.+
T Consensus       252 ~~~~itG~~i~vdGG~~~~  270 (271)
T 4ibo_A          252 ASDYVNGQIIYVDGGMLSV  270 (271)
T ss_dssp             GGTTCCSCEEEESTTGGGB
T ss_pred             cccCCCCcEEEECCCeecc
Confidence            9999999999999998764

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=7e-51  Score=342.39  Aligned_cols=251  Identities=25%  Similarity=0.392  Sum_probs=217.9

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++...   +.++.++.+|++|++  ++++++++
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~d~~--~v~~~~~~   98 (283)
T 3v8b_A           24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA---GGQAIALEADVSDEL--QMRNAVRD   98 (283)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT---TCCEEEEECCTTCHH--HHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEccCCCHH--HHHHHHHH
Confidence            568899999999999999999999999999999999 667777777777543   468999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.+|++|++|||||......++.+.+.++|+.++++|+.+++.++++++|+|++++ .|+||++||..+....+.++.
T Consensus        99 ~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~  177 (283)
T 3v8b_A           99 LVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTRTFTTPGA  177 (283)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCCSTTC
T ss_pred             HHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhccCCCCCCc
Confidence            9999999999999999865557888999999999999999999999999999998876 799999999988763225789


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHH-----HHHHhhccCC--CCCCCChhhHHHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERA-----VKLVREAAPL--HRWLDVKNDLAST  232 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~~dva~~  232 (266)
                      ..|+++|+|++.|+++++.|++++|||||+|+||+|+|++..........     ........|.  +|+++|+ |+|+.
T Consensus       178 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pe-dvA~~  256 (283)
T 3v8b_A          178 TAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSE-DVAEL  256 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHH-HHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHH-HHHHH
Confidence            99999999999999999999999999999999999999998654322211     1223345566  7888887 99999


Q ss_pred             HHHHccCCCCcccccEEEEcCCcccc
Q 024517          233 VIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       233 ~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      ++||+|+.++++|||.|.+|||.++.
T Consensus       257 v~fL~s~~a~~itG~~i~vdGG~~~~  282 (283)
T 3v8b_A          257 IRFLVSERARHVTGSPVWIDGGQGLL  282 (283)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             HHHHcCccccCCcCCEEEECcCcccc
Confidence            99999999999999999999998764

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=7.2e-51  Score=342.16  Aligned_cols=256  Identities=27%  Similarity=0.411  Sum_probs=228.9

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++.+....+.++.++.+|++|++  ++++++++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~--~v~~~~~~   84 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNED--ETARAVDA   84 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHH--HHHHHHHH
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHH--HHHHHHHH
Confidence            467899999999999999999999999999999999 667778888888755322347899999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.+|++|++|||||......++.+.+.++|+..+++|+.++++++++++|+|.+++ +|+||++||..+..+  .++.
T Consensus        85 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~  161 (281)
T 3svt_A           85 VTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG-GGSFVGISSIAASNT--HRWF  161 (281)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHSC--CTTC
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEeCHHHcCC--CCCC
Confidence            9999999999999999755667888899999999999999999999999999998876 799999999998877  5888


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|+++++.|++++|||||+|+||+|+|++........+....+....|++++++|+ |+|+.++||+++
T Consensus       162 ~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~-dva~~~~~l~s~  240 (281)
T 3svt_A          162 GAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVE-DVANMAMFLLSD  240 (281)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHH-HHHHHHHHHHSG
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHhCc
Confidence            9999999999999999999999999999999999999999876544555566677788999999998 999999999999


Q ss_pred             CCCcccccEEEEcCCcccc-CCCc
Q 024517          240 GSRYMTGTTIYVDGAQSIT-RPRM  262 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~-~~~~  262 (266)
                      ..+++||+.|.+|||.++. .+++
T Consensus       241 ~~~~itG~~~~vdgG~~~~~~~~~  264 (281)
T 3svt_A          241 AASFVTGQVINVDGGQMLRRGPDF  264 (281)
T ss_dssp             GGTTCCSCEEEESTTGGGSCCCCC
T ss_pred             ccCCCCCCEEEeCCChhcccCCcc
Confidence            8899999999999999987 4443

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.5e-50  Score=339.73  Aligned_cols=256  Identities=23%  Similarity=0.401  Sum_probs=224.0

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.++++++.+++...   +.++.++.+|+++.+  +++++++++
T Consensus         5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~--~v~~~~~~~   79 (280)
T 3tox_A            5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG---GGEAAALAGDVGDEA--LHEALVELA   79 (280)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT---TCCEEECCCCTTCHH--HHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEECCCCCHH--HHHHHHHHH
Confidence            47899999999999999999999999999999999 667777777777543   468999999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||||......++.+.+.++|+..+++|+.+++.+++.++|+|.+++ .|+||++||..+...+ .++..
T Consensus        80 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-~~~~~  157 (280)
T 3tox_A           80 VRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGHTAG-FAGVA  157 (280)
T ss_dssp             HHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCSBTTTBC-CTTCH
T ss_pred             HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhCcCC-CCCch
Confidence            999999999999999865667888999999999999999999999999999998876 7999999999887322 58899


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc--ccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV--GQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      .|+++|+|++.|+++++.|++++|||||+|+||+|+|++.....  ..+..........|++++++|+ |+|+.++||++
T Consensus       158 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~~L~s  236 (280)
T 3tox_A          158 PYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPE-EIAEAALYLAS  236 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHH-HHHHHHHHHHS
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHH-HHHHHHHHHhC
Confidence            99999999999999999999999999999999999999876522  1344555666788999999998 99999999999


Q ss_pred             CCCCcccccEEEEcCCccccCCCccCC
Q 024517          239 DGSRYMTGTTIYVDGAQSITRPRMRSY  265 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~~~~~~~~~~  265 (266)
                      +.++++|||+|.+|||.+++.+...++
T Consensus       237 ~~a~~itG~~i~vdGG~~~~~~a~~~~  263 (280)
T 3tox_A          237 DGASFVTGAALLADGGASVTKAAENLY  263 (280)
T ss_dssp             GGGTTCCSCEEEESTTGGGCC------
T ss_pred             ccccCCcCcEEEECCCccccccccchH
Confidence            999999999999999999998887764

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=1.6e-50  Score=335.56  Aligned_cols=246  Identities=20%  Similarity=0.335  Sum_probs=221.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++...   +.++.++.+|++|.+  ++++++++
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~--~v~~~~~~   82 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA---GGKAIGLECNVTDEQ--HREAVIKA   82 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT---TCCEEEEECCTTCHH--HHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEECCCCCHH--HHHHHHHH
Confidence            568899999999999999999999999999999999 667777777777654   468999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||.. ...++ +.+.++|+.++++|+.+++.++++++|+|++++ .|+||++||..+..+  .++.
T Consensus        83 ~~~~~g~id~lv~nAg~~-~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~  157 (256)
T 3gaf_A           83 ALDQFGKITVLVNNAGGG-GPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGENT--NVRM  157 (256)
T ss_dssp             HHHHHSCCCEEEECCCCC-CCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTCC--CTTC
T ss_pred             HHHHcCCCCEEEECCCCC-CCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHcCC--CCCc
Confidence            999999999999999984 44556 889999999999999999999999999998876 799999999998877  6889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|+++++.|++++|||||+|+||+|+|++..... .++....+....|++|+++|+ |+|+.++||+++
T Consensus       158 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~~~-dva~~~~~L~s~  235 (256)
T 3gaf_A          158 ASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVL-TPEIERAMLKHTPLGRLGEAQ-DIANAALFLCSP  235 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHC-CHHHHHHHHTTCTTSSCBCHH-HHHHHHHHHHSG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhcc-CHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHcCC
Confidence            999999999999999999999999999999999999999876543 344556667788999999998 999999999999


Q ss_pred             CCCcccccEEEEcCCcccc
Q 024517          240 GSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~  258 (266)
                      .++++|||.|.+|||...+
T Consensus       236 ~~~~itG~~i~vdgG~~~~  254 (256)
T 3gaf_A          236 AAAWISGQVLTVSGGGVQE  254 (256)
T ss_dssp             GGTTCCSCEEEESTTSCCC
T ss_pred             cccCccCCEEEECCCcccc
Confidence            9999999999999998764

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=1.7e-50  Score=333.96  Aligned_cols=242  Identities=23%  Similarity=0.351  Sum_probs=218.0

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+.+++..+++.      .+..++.+|++|++  ++++++++
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~d~~--~v~~~~~~   76 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG------DNGKGMALNVTNPE--SIEAVLKA   76 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG------GGEEEEECCTTCHH--HHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------ccceEEEEeCCCHH--HHHHHHHH
Confidence            568999999999999999999999999999999999 6666666666653      35788999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.+|++|++|||||.. ...++.+.+.++|++.+++|+.++++++++++|+|.+++ .|+||++||..+..+  .++.
T Consensus        77 ~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~--~~~~  152 (248)
T 3op4_A           77 ITDEFGGVDILVNNAGIT-RDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGTMG--NAGQ  152 (248)
T ss_dssp             HHHHHCCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHC--CTTC
T ss_pred             HHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCC--CCCC
Confidence            999999999999999984 557788899999999999999999999999999998876 799999999998877  6889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|+|++.|+++++.|++++|||||+|+||+|+|++....  .++.........|.+++.+|+ |+|+.+.||+++
T Consensus       153 ~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~p~-dva~~v~~L~s~  229 (248)
T 3op4_A          153 ANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPR-EIASAVAFLASP  229 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS--CHHHHHHHHHTCTTCSCBCHH-HHHHHHHHHHSG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc--CHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCC
Confidence            99999999999999999999999999999999999999998654  234445556778999999998 999999999999


Q ss_pred             CCCcccccEEEEcCCccc
Q 024517          240 GSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~  257 (266)
                      .++++|||.|.+|||.++
T Consensus       230 ~~~~itG~~i~vdgG~~~  247 (248)
T 3op4_A          230 EAAYITGETLHVNGGMYM  247 (248)
T ss_dssp             GGTTCCSCEEEESTTSSC
T ss_pred             ccCCccCcEEEECCCeec
Confidence            999999999999999764

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=2.5e-50  Score=335.57  Aligned_cols=248  Identities=22%  Similarity=0.334  Sum_probs=223.4

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++....  ..++.++.+|+++++  ++++++++
T Consensus         6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~~~~--~v~~~~~~   81 (262)
T 3pk0_A            6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG--SGKVIGVQTDVSDRA--QCDALAGR   81 (262)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS--SSCEEEEECCTTSHH--HHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC--CCcEEEEEcCCCCHH--HHHHHHHH
Confidence            578999999999999999999999999999999999 6677777777776542  258999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccc-ccCCCCC
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGA-ERGLYPG  158 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~  158 (266)
                      +.++++++|++|||||. ....++.+.+.++|++++++|+.++++++++++|+|++++ .|+||++||..+. .+  .++
T Consensus        82 ~~~~~g~id~lvnnAg~-~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~--~~~  157 (262)
T 3pk0_A           82 AVEEFGGIDVVCANAGV-FPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPITG--YPG  157 (262)
T ss_dssp             HHHHHSCCSEEEECCCC-CCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTTTBC--CTT
T ss_pred             HHHHhCCCCEEEECCCC-CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCC--CCC
Confidence            99999999999999998 4557888999999999999999999999999999998876 6999999999886 44  588


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ...|+++|++++.|+++++.|++++|||||+|+||+|+|++....  .++....+....|.+++++|+ |+|+.+.||++
T Consensus       158 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~p~-dva~~v~~L~s  234 (262)
T 3pk0_A          158 WSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN--GEEYIASMARSIPAGALGTPE-DIGHLAAFLAT  234 (262)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT--CHHHHHHHHTTSTTSSCBCHH-HHHHHHHHHHS
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc--CHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhC
Confidence            999999999999999999999999999999999999999987543  345566677889999999998 99999999999


Q ss_pred             CCCCcccccEEEEcCCccccC
Q 024517          239 DGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      +.++++|||.|.+|||.++..
T Consensus       235 ~~~~~itG~~i~vdGG~~~~~  255 (262)
T 3pk0_A          235 KEAGYITGQAIAVDGGQVLPE  255 (262)
T ss_dssp             GGGTTCCSCEEEESTTTTCCS
T ss_pred             ccccCCcCCEEEECCCeecCc
Confidence            999999999999999988753

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=8.1e-50  Score=334.75  Aligned_cols=247  Identities=24%  Similarity=0.367  Sum_probs=221.2

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.++++++.+++...   +.++.++.+|++|.+  ++++++++
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~--~v~~~~~~  102 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV---GGKALPIRCDVTQPD--QVRGMLDQ  102 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT---TCCCEEEECCTTCHH--HHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEEcCCCCHH--HHHHHHHH
Confidence            467899999999999999999999999999999999 778888888888654   468899999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.+|++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.++|+|.+++.+|+||++||..+..+...++.
T Consensus       103 ~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~  181 (276)
T 3r1i_A          103 MTGELGGIDIAVCNAGIV-SVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQV  181 (276)
T ss_dssp             HHHHHSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCC
T ss_pred             HHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCc
Confidence            999999999999999984 5567888999999999999999999999999999988764589999999988765322467


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|+++++.|++++|||||+|+||+|+|++.....   .....+....|++|+++|+ |+|+.++||+|+
T Consensus       182 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~---~~~~~~~~~~p~~r~~~pe-dvA~~v~fL~s~  257 (276)
T 3r1i_A          182 SHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLA---DYHALWEPKIPLGRMGRPE-ELTGLYLYLASA  257 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGG---GGHHHHGGGSTTSSCBCGG-GSHHHHHHHHSG
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccch---HHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCc
Confidence            899999999999999999999999999999999999999986542   2345556788999999998 999999999999


Q ss_pred             CCCcccccEEEEcCCccc
Q 024517          240 GSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~  257 (266)
                      .++++|||.|.+|||.+.
T Consensus       258 ~~~~itG~~i~vdGG~~~  275 (276)
T 3r1i_A          258 ASSYMTGSDIVIDGGYTC  275 (276)
T ss_dssp             GGTTCCSCEEEESTTTTC
T ss_pred             cccCccCcEEEECcCccC
Confidence            999999999999999865

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=6.7e-50  Score=334.76  Aligned_cols=247  Identities=21%  Similarity=0.346  Sum_probs=221.0

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      |++++|++|||||++|||+++|++|+++|++|+++++.+..++..+++...   +.++.++.+|++|.+  +++++. +.
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~--~v~~~~-~~  100 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADG---GGSAEAVVADLADLE--GAANVA-EE  100 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTT---TCEEEEEECCTTCHH--HHHHHH-HH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhc---CCcEEEEEecCCCHH--HHHHHH-HH
Confidence            468899999999999999999999999999999999777777777777643   468999999999998  999984 45


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.++++++|+|.+++ .|+||++||..+..+  .++..
T Consensus       101 ~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~--~~~~~  176 (273)
T 3uf0_A          101 LAATRRVDVLVNNAGII-ARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSFQG--GRNVA  176 (273)
T ss_dssp             HHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC--CSSCH
T ss_pred             HHhcCCCcEEEECCCCC-CCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhcCC--CCCCh
Confidence            56679999999999984 557788899999999999999999999999999998876 699999999998877  68899


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|+|++.|+++++.|++++|||||+|+||+|.|++.......+.....+....|.+++++|+ |+|+.++||+++.
T Consensus       177 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dva~~v~~L~s~~  255 (273)
T 3uf0_A          177 AYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPE-DMVGPAVFLASDA  255 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGG-GGHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHhCch
Confidence            999999999999999999999999999999999999999876554555666677889999999998 9999999999998


Q ss_pred             CCcccccEEEEcCCcccc
Q 024517          241 SRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~~  258 (266)
                      ++++|||.|.+|||.+.+
T Consensus       256 a~~itG~~i~vdGG~~~s  273 (273)
T 3uf0_A          256 ASYVHGQVLAVDGGWLAS  273 (273)
T ss_dssp             GTTCCSCEEEESTTGGGC
T ss_pred             hcCCcCCEEEECcCccCC
Confidence            999999999999998753

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=1.5e-49  Score=334.97  Aligned_cols=248  Identities=24%  Similarity=0.397  Sum_probs=212.6

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-c----------------ccccHHHHHHHhcccCCCCCeEEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-N----------------ERRLSSVAEKMMGSLKGGQPVEVVGLD   64 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~D   64 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +                .+++++..+++...   +.++.++.+|
T Consensus         8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D   84 (286)
T 3uve_A            8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH---NRRIVTAEVD   84 (286)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT---TCCEEEEECC
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc---CCceEEEEcC
Confidence            47899999999999999999999999999999998 4                33444555555433   4689999999


Q ss_pred             cCCCchHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEE
Q 024517           65 MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVF  144 (266)
Q Consensus        65 ~~~~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~  144 (266)
                      +++.+  +++++++++.+.+|++|++|||||......++.+.+.++|+.++++|+.++++++++++|+|.+++++|+||+
T Consensus        85 v~~~~--~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~  162 (286)
T 3uve_A           85 VRDYD--ALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIIL  162 (286)
T ss_dssp             TTCHH--HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred             CCCHH--HHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEE
Confidence            99999  9999999999999999999999998544445888999999999999999999999999999987654689999


Q ss_pred             EecccccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc------------ccHHHHH-
Q 024517          145 LTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV------------GQERAVK-  211 (266)
Q Consensus       145 iss~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~------------~~~~~~~-  211 (266)
                      +||..+..+  .++...|+++|+++++|+++++.|++++|||||+|+||+|+|++.....            ....... 
T Consensus       163 isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (286)
T 3uve_A          163 TSSVGGLKA--YPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPI  240 (286)
T ss_dssp             ECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHH
T ss_pred             ECchhhccC--CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHH
Confidence            999998877  6889999999999999999999999999999999999999999875321            0111111 


Q ss_pred             -HHhhccCCCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          212 -LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       212 -~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                       ......| +++++|+ |+|++++||+|+.++++|||.|.+|||.+++
T Consensus       241 ~~~~~~~p-~r~~~p~-dvA~~v~fL~s~~a~~itG~~i~vdGG~~l~  286 (286)
T 3uve_A          241 CQMFHTLP-IPWVEPI-DISNAVLFFASDEARYITGVTLPIDAGSCLK  286 (286)
T ss_dssp             HHTTCSSS-CSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHhhhccC-CCcCCHH-HHHHHHHHHcCccccCCcCCEEeECCccccc
Confidence             2344566 7888887 9999999999999999999999999998763

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.1e-49  Score=334.08  Aligned_cols=248  Identities=25%  Similarity=0.367  Sum_probs=220.0

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++      +.++.++.+|+++.+  ++++++++
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~d~~--~v~~~~~~   94 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI------GSKAFGVRVDVSSAK--DAESMVEK   94 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH------CTTEEEEECCTTCHH--HHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCceEEEEecCCCHH--HHHHHHHH
Confidence            678999999999999999999999999999999999 666666665554      358899999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.+|++|++|||||. ....++.+.+.++|+.++++|+.+++.++++++|+|++++ .|+||++||..+..+  .++.
T Consensus        95 ~~~~~g~iD~lv~nAg~-~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~  170 (277)
T 4dqx_A           95 TTAKWGRVDVLVNNAGF-GTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTATSA--IADR  170 (277)
T ss_dssp             HHHHHSCCCEEEECCCC-CCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEECCGGGTSC--CTTB
T ss_pred             HHHHcCCCCEEEECCCc-CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhCcC--CCCC
Confidence            99999999999999998 4557788899999999999999999999999999998776 689999999998877  6889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc----ccHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV----GQERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      ..|+++|+|++.|+++++.|++++|||||+|+||+|+|+++....    ........+....|.+++++|+ |+|+.++|
T Consensus       171 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pe-dvA~~v~~  249 (277)
T 4dqx_A          171 TAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAE-EIAEAMLF  249 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHH-HHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHH-HHHHHHHH
Confidence            999999999999999999999999999999999999999843321    1223334466788999999988 99999999


Q ss_pred             HccCCCCcccccEEEEcCCccccCCC
Q 024517          236 LISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      |+++.++++||+.|.+|||.++....
T Consensus       250 L~s~~~~~itG~~i~vdGG~~~~~~~  275 (277)
T 4dqx_A          250 LASDRSRFATGSILTVDGGSSIGNHL  275 (277)
T ss_dssp             HHSGGGTTCCSCEEEESSSSSSCCTT
T ss_pred             HhCCccCCCcCCEEEECCchhhhhcc
Confidence            99999999999999999999887653

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-49  Score=331.59  Aligned_cols=245  Identities=21%  Similarity=0.310  Sum_probs=221.4

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++|++|||||++|||+++|++|+++|++|++++ +.++++++.+++.+.   +.++.++.+|++|++  +++++++++.
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~--~v~~~~~~~~   83 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT---GRRALSVGTDITDDA--QVAHLVDETM   83 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHH--HHHHHHHHHH
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEcCCCCHH--HHHHHHHHHH
Confidence            6899999999999999999999999999999999 677778887777654   468999999999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.++++|++|||||......++.+.+.++|++.+++|+.+++.++++++|+|.+++  |+||++||..+..+  .++...
T Consensus        84 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~--~~~~~~  159 (264)
T 3ucx_A           84 KAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK--GAVVNVNSMVVRHS--QAKYGA  159 (264)
T ss_dssp             HHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT--CEEEEECCGGGGCC--CTTCHH
T ss_pred             HHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEECcchhccC--CCccHH
Confidence            99999999999999865667888999999999999999999999999999998764  89999999998877  688999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc---------cHHHHHHHhhccCCCCCCCChhhHHHH
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---------QERAVKLVREAAPLHRWLDVKNDLAST  232 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~  232 (266)
                      |+++|++++.|+++++.|++++|||||+|+||+|+|++......         .++.........|++|+++|+ |+|+.
T Consensus       160 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dvA~~  238 (264)
T 3ucx_A          160 YKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTED-EVASA  238 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHH-HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHH-HHHHH
Confidence            99999999999999999999999999999999999998765431         234455566788999999998 99999


Q ss_pred             HHHHccCCCCcccccEEEEcCCccc
Q 024517          233 VIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       233 ~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      ++||+|+.++++|||+|.+|||.++
T Consensus       239 v~~L~s~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          239 ILFMASDLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHcCccccCCCCCEEEECCCccC
Confidence            9999999999999999999999864

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=2.1e-49  Score=334.71  Aligned_cols=247  Identities=24%  Similarity=0.340  Sum_probs=223.3

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++.+..  ..++.++.+|++|.+  ++++++++
T Consensus        37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~d~~--~v~~~~~~  112 (293)
T 3rih_A           37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG--AGNVIGVRLDVSDPG--SCADAART  112 (293)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS--SSCEEEEECCTTCHH--HHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC--CCcEEEEEEeCCCHH--HHHHHHHH
Confidence            467899999999999999999999999999999999 7788888888886542  158999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccc-ccCCCCC
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGA-ERGLYPG  158 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~  158 (266)
                      +.+.++++|++|||||.. ...++.+.+.++|+..+++|+.++++++++++|+|++++ .|+||++||..+. .+  .++
T Consensus       113 ~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~~~--~~~  188 (293)
T 3rih_A          113 VVDAFGALDVVCANAGIF-PEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVTG--YPG  188 (293)
T ss_dssp             HHHHHSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTTBB--CTT
T ss_pred             HHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhccCC--CCC
Confidence            999999999999999984 557788899999999999999999999999999998876 6999999999885 44  688


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ...|+++|++++.|+++++.|++++|||||+|+||+|.|++....  .++.........|++++++|+ |+|+.++||++
T Consensus       189 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~p~-dvA~~v~fL~s  265 (293)
T 3rih_A          189 WSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM--GEEYISGMARSIPMGMLGSPV-DIGHLAAFLAT  265 (293)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT--CHHHHHHHHTTSTTSSCBCHH-HHHHHHHHHHS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc--cHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHhC
Confidence            999999999999999999999999999999999999999987553  244556667789999999998 99999999999


Q ss_pred             CCCCcccccEEEEcCCcccc
Q 024517          239 DGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~~~  258 (266)
                      +.++++||++|.+|||.++.
T Consensus       266 ~~a~~itG~~i~vdGG~~~~  285 (293)
T 3rih_A          266 DEAGYITGQAIVVDGGQVLP  285 (293)
T ss_dssp             GGGTTCCSCEEEESTTTTCB
T ss_pred             ccccCCCCCEEEECCCccCC
Confidence            99999999999999998875

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=8.7e-50  Score=333.56  Aligned_cols=245  Identities=27%  Similarity=0.395  Sum_probs=220.6

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.+.++++.+++...   +.++.++.+|++|.+  +++++++++
T Consensus        25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~--~v~~~~~~~   99 (270)
T 3ftp_A           25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA---GLEGRGAVLNVNDAT--AVDALVEST   99 (270)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH---TCCCEEEECCTTCHH--HHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEEeCCCHH--HHHHHHHHH
Confidence            47899999999999999999999999999999999 666777777777654   457899999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.+|++|++|||||.. ...++.+.+.++|+.++++|+.+++.++++++|+|.+++ .|+||++||..+..+  .++..
T Consensus       100 ~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~  175 (270)
T 3ftp_A          100 LKEFGALNVLVNNAGIT-QDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGSAG--NPGQV  175 (270)
T ss_dssp             HHHHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHC--CTTBH
T ss_pred             HHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCC--CCCch
Confidence            99999999999999984 556778899999999999999999999999999998876 799999999998877  68899


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|+|++.|+++++.|++++|||||+|+||+|+|++....  ............|++++++|+ |+|+.++||+++.
T Consensus       176 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~pe-dvA~~v~~L~s~~  252 (270)
T 3ftp_A          176 NYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL--PQEQQTALKTQIPLGRLGSPE-DIAHAVAFLASPQ  252 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS--CHHHHHHHHTTCTTCSCBCHH-HHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc--CHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHhCCC
Confidence            9999999999999999999999999999999999999987653  334455566788999999998 9999999999998


Q ss_pred             CCcccccEEEEcCCcccc
Q 024517          241 SRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~~  258 (266)
                      .+++||++|.+|||..++
T Consensus       253 ~~~itG~~i~vdGG~~~s  270 (270)
T 3ftp_A          253 AGYITGTTLHVNGGMFMS  270 (270)
T ss_dssp             GTTCCSCEEEESTTSSCC
T ss_pred             cCCccCcEEEECCCcccC
Confidence            999999999999998753

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=1e-49  Score=330.95  Aligned_cols=250  Identities=22%  Similarity=0.333  Sum_probs=218.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +|++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++...   +.++.++.+|+++.+  +++++++++
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~--~v~~~~~~~   77 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF---PGQILTVQMDVRNTD--DIQKMIEQI   77 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS---TTCEEEEECCTTCHH--HHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEccCCCHH--HHHHHHHHH
Confidence            47899999999999999999999999999999999 667777777777543   468999999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.+|++|++|||||. ....++.+.+.++|+.++++|+.++++++++++|+|.+++..|+||++||..+..+  .++..
T Consensus        78 ~~~~g~id~lv~nAg~-~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~  154 (257)
T 3imf_A           78 DEKFGRIDILINNAAG-NFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDA--GPGVI  154 (257)
T ss_dssp             HHHHSCCCEEEECCCC-CCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSC--CTTCH
T ss_pred             HHHcCCCCEEEECCCC-CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccC--CCCcH
Confidence            9999999999999998 45578888999999999999999999999999999965544699999999998877  68899


Q ss_pred             hhHHhHHHHHHHHHHHHHHhC-CCCcEEEEEecCcccCCCccccc-ccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          161 AYGACAASIHQLVRTAAMEIG-KHKIRVNGIARGLHLQDEYPIAV-GQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      .|+++|+++++|+++++.|++ +.|||||+|+||+|+|++..... ..+...+......|++|+++|+ |+|+.++||++
T Consensus       155 ~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~~L~s  233 (257)
T 3imf_A          155 HSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPE-EIAGLAYYLCS  233 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHH-HHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcC
Confidence            999999999999999999997 67999999999999999765422 1222334456678999999998 99999999999


Q ss_pred             CCCCcccccEEEEcCCccccCC
Q 024517          239 DGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                      +.++++||+.|.+|||.++...
T Consensus       234 ~~~~~itG~~i~vdGG~~~~~~  255 (257)
T 3imf_A          234 DEAAYINGTCMTMDGGQHLHQY  255 (257)
T ss_dssp             GGGTTCCSCEEEESTTTTSCCC
T ss_pred             chhcCccCCEEEECCCcccCCC
Confidence            9999999999999999987643

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=1.1e-49  Score=332.20  Aligned_cols=242  Identities=22%  Similarity=0.354  Sum_probs=208.1

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++      +.++.++.+|++|.+  ++++++++
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~d~~--~v~~~~~~   94 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL------GKDVFVFSANLSDRK--SIKQLAEV   94 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------CSSEEEEECCTTSHH--HHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCceEEEEeecCCHH--HHHHHHHH
Confidence            468899999999999999999999999999999999 666666655544      358999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|.|.+++ .|+||++||..+..+  .++.
T Consensus        95 ~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~~~--~~~~  170 (266)
T 3grp_A           95 AEREMEGIDILVNNAGIT-RDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVVG--NPGQ  170 (266)
T ss_dssp             HHHHHTSCCEEEECCCCC------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC---------CH
T ss_pred             HHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHcCC--CCCc
Confidence            999999999999999984 556778889999999999999999999999999998776 699999999998877  5889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|+|++.|+++++.|++++|||||+|+||+|+|++....  .+.....+....|++|+++|+ |+|+.++||+++
T Consensus       171 ~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~~e-dvA~~v~~L~s~  247 (266)
T 3grp_A          171 TNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL--NEKQKEAIMAMIPMKRMGIGE-EIAFATVYLASD  247 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC--CHHHHHHHHTTCTTCSCBCHH-HHHHHHHHHHSG
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc--CHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCc
Confidence            99999999999999999999999999999999999999987654  344556667789999999998 999999999999


Q ss_pred             CCCcccccEEEEcCCccc
Q 024517          240 GSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~  257 (266)
                      .++++|||+|.+|||+++
T Consensus       248 ~~~~itG~~i~vdGG~~~  265 (266)
T 3grp_A          248 EAAYLTGQTLHINGGMAM  265 (266)
T ss_dssp             GGTTCCSCEEEESTTC--
T ss_pred             cccCccCCEEEECCCeee
Confidence            999999999999999864

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=1e-49  Score=329.14  Aligned_cols=244  Identities=22%  Similarity=0.316  Sum_probs=215.4

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      +++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++      +.++.++.+|++|++  ++++++++
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~~~~--~v~~~~~~   73 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI------GKKARAIAADISDPG--SVKALFAE   73 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH------CTTEEECCCCTTCHH--HHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCceEEEEcCCCCHH--HHHHHHHH
Confidence            357899999999999999999999999999999999 666666666655      368899999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.+|++|++|||||.. ...++.+.+.++|++++++|+.++++++++++|+|++++..|+||++||..+..+  .++.
T Consensus        74 ~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~  150 (247)
T 3rwb_A           74 IQALTGGIDILVNNASIV-PFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAG--TPNM  150 (247)
T ss_dssp             HHHHHSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHT--CTTC
T ss_pred             HHHHCCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccC--CCCc
Confidence            999999999999999984 5677888999999999999999999999999999987654689999999988877  6889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|+++++.|++++|||||+|+||+|+|++....... ..........|++++++|+ |+|+.+.||+++
T Consensus       151 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~r~~~pe-dva~~v~~L~s~  228 (247)
T 3rwb_A          151 AAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHN-EAFGFVEMLQAMKGKGQPE-HIADVVSFLASD  228 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGG-GGHHHHHHHSSSCSCBCHH-HHHHHHHHHHSG
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChh-HHHHHHhcccccCCCcCHH-HHHHHHHHHhCc
Confidence            99999999999999999999999999999999999999987654322 2222233337889999988 999999999999


Q ss_pred             CCCcccccEEEEcCCccc
Q 024517          240 GSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~  257 (266)
                      .++++|||.|.+|||.+.
T Consensus       229 ~~~~itG~~i~vdGG~~~  246 (247)
T 3rwb_A          229 DARWITGQTLNVDAGMVR  246 (247)
T ss_dssp             GGTTCCSCEEEESTTSSC
T ss_pred             cccCCCCCEEEECCCccC
Confidence            999999999999999764

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=5.2e-49  Score=329.13  Aligned_cols=249  Identities=23%  Similarity=0.298  Sum_probs=220.3

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++      +.++.++.+|+++.+  ++++++++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~~~~--~v~~~~~~   78 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV------GRGAVHHVVDLTNEV--SVRALIDF   78 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH------CTTCEEEECCTTCHH--HHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh------CCCeEEEECCCCCHH--HHHHHHHH
Confidence            357899999999999999999999999999999999 777777777666      357889999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCC-CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           80 ACQILGNLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      +.+.+|++|++|||||.... ..++.+.+.++|++.+++|+.++++++++++|+|.+++ .|+||++||..+..+  .++
T Consensus        79 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~--~~~  155 (271)
T 3tzq_B           79 TIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAHAA--YDM  155 (271)
T ss_dssp             HHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSB--CSS
T ss_pred             HHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHcCC--CCC
Confidence            99999999999999998533 45677889999999999999999999999999998876 799999999998877  688


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ...|+++|++++.|+++++.|++++|||||+|+||+|+|++..... .+.....+....|.+|+++|+ |+|+.++||++
T Consensus       156 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~r~~~p~-dvA~~v~~L~s  233 (271)
T 3tzq_B          156 STAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL-PQPIVDIFATHHLAGRIGEPH-EIAELVCFLAS  233 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC----CHHHHHHHHTTSTTSSCBCHH-HHHHHHHHHHS
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC-CHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhC
Confidence            9999999999999999999999999999999999999999886433 344556667788999999998 99999999999


Q ss_pred             CCCCcccccEEEEcCCccccCCCc
Q 024517          239 DGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      +.++++|||.|.+|||.....|.+
T Consensus       234 ~~~~~itG~~i~vdGG~~~~~~~~  257 (271)
T 3tzq_B          234 DRAAFITGQVIAADSGLLAHLPGL  257 (271)
T ss_dssp             GGGTTCCSCEEEESTTTTTBCTTH
T ss_pred             cccCCcCCCEEEECCCccccCCCc
Confidence            999999999999999954444443

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=6.2e-49  Score=333.10  Aligned_cols=248  Identities=22%  Similarity=0.366  Sum_probs=212.6

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-c------------ccccHHHHHHHhcccCCCCCeEEEEEecCCC
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-N------------ERRLSSVAEKMMGSLKGGQPVEVVGLDMEED   68 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~------------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   68 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +            .+++++..+++...   +.++.++.+|++|.
T Consensus        25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~  101 (299)
T 3t7c_A           25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL---GRRIIASQVDVRDF  101 (299)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT---TCCEEEEECCTTCH
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc---CCceEEEECCCCCH
Confidence            37899999999999999999999999999999998 4            34455555555443   46899999999999


Q ss_pred             chHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           69 REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                      +  +++++++++.+.+|++|++|||||......++.+.+.++|+.++++|+.+++.+++.++|+|.+++..|+||++||.
T Consensus       102 ~--~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~  179 (299)
T 3t7c_A          102 D--AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSI  179 (299)
T ss_dssp             H--HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCG
T ss_pred             H--HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECCh
Confidence            9  99999999999999999999999985554558889999999999999999999999999998776546999999999


Q ss_pred             cccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc------------cHHH--HHHHh
Q 024517          149 IGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG------------QERA--VKLVR  214 (266)
Q Consensus       149 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~------------~~~~--~~~~~  214 (266)
                      .+..+  .++...|+++|+|++.|+++++.|++++|||||+|+||+|+|++......            ....  .....
T Consensus       180 ~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (299)
T 3t7c_A          180 GGLRG--AENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQM  257 (299)
T ss_dssp             GGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHH
T ss_pred             hhccC--CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhh
Confidence            98877  68899999999999999999999999999999999999999998753210            0111  11233


Q ss_pred             hccCCCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          215 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       215 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      ...| +++++|+ |+|+.++||+|+.++++||++|.+|||.++.
T Consensus       258 ~~~p-~r~~~pe-dvA~~v~fL~s~~a~~itG~~i~vdGG~~l~  299 (299)
T 3t7c_A          258 HVLP-IPYVEPA-DISNAILFLVSDDARYITGVSLPVDGGALLK  299 (299)
T ss_dssp             SSSS-CSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             cccC-cCCCCHH-HHHHHHHHHhCcccccCcCCEEeeCCCcccC
Confidence            4556 7788887 9999999999999999999999999998763

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=3.7e-49  Score=327.98  Aligned_cols=245  Identities=25%  Similarity=0.388  Sum_probs=217.8

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++      +.++.++.+|+++++  +++++++++
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~--~v~~~~~~~   76 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI------GPAAYAVQMDVTRQD--SIDAAIAAT   76 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------CTTEEEEECCTTCHH--HHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCCceEEEeeCCCHH--HHHHHHHHH
Confidence            57899999999999999999999999999999999 666666666665      257899999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+++|++|++|||||.. ...++.+.+.++|++++++|+.++++++++++|.|.+++.+|+||++||..+..+  .++..
T Consensus        77 ~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~  153 (259)
T 4e6p_A           77 VEHAGGLDILVNNAALF-DLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRG--EALVA  153 (259)
T ss_dssp             HHHSSSCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC--CTTBH
T ss_pred             HHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccC--CCCCh
Confidence            99999999999999984 5567888999999999999999999999999999987654689999999998877  68899


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc---------ccHHHHHHHhhccCCCCCCCChhhHHH
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV---------GQERAVKLVREAAPLHRWLDVKNDLAS  231 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~  231 (266)
                      .|+++|++++.|+++++.|++++|||||+|+||+|+||+.....         ...+.........|++|+++|+ |+|+
T Consensus       154 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~-dva~  232 (259)
T 4e6p_A          154 IYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAE-DLTG  232 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTH-HHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHH-HHHH
Confidence            99999999999999999999999999999999999999875431         1223344556778999999998 9999


Q ss_pred             HHHHHccCCCCcccccEEEEcCCcccc
Q 024517          232 TVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       232 ~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      +++||+++.++++|||.|.+|||.+++
T Consensus       233 ~v~~L~s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          233 MAIFLASAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             HHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHHHHhCCccCCCCCCEEEECcChhcC
Confidence            999999999999999999999998753

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=2.1e-49  Score=331.06  Aligned_cols=243  Identities=23%  Similarity=0.374  Sum_probs=216.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec--ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN--ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |++++|++|||||++|||+++|++|+++|++|+++++  .+..+++.+++...   +.++.++.+|++|.+  +++++++
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~d~~--~v~~~~~   98 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA---GGEAFAVKADVSQES--EVEALFA   98 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTSHH--HHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc---CCcEEEEECCCCCHH--HHHHHHH
Confidence            5688999999999999999999999999999999883  34556666666543   468999999999999  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++.+.+|++|++|||||.. ...++.+.+.++|+.++++|+.++++++++++|+|.+++ .|+||++||..+..+  .++
T Consensus        99 ~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~  174 (269)
T 4dmm_A           99 AVIERWGRLDVLVNNAGIT-RDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGEMG--NPG  174 (269)
T ss_dssp             HHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHHHC--CTT
T ss_pred             HHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCC--CCC
Confidence            9999999999999999984 556788899999999999999999999999999998876 699999999998877  688


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ...|+++|+|++.|+++++.|++++|||||+|+||+|+|++.....     ........|++++++|+ |+|+.++||++
T Consensus       175 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-----~~~~~~~~p~~r~~~~~-dvA~~v~~l~s  248 (269)
T 4dmm_A          175 QANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELA-----AEKLLEVIPLGRYGEAA-EVAGVVRFLAA  248 (269)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHH-----HHHHGGGCTTSSCBCHH-HHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccccc-----HHHHHhcCCCCCCCCHH-HHHHHHHHHhC
Confidence            9999999999999999999999999999999999999999875432     24556778999999998 99999999999


Q ss_pred             C-CCCcccccEEEEcCCcccc
Q 024517          239 D-GSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       239 ~-~~~~~~G~~i~~dgG~~~~  258 (266)
                      + .++++|||.|.+|||.+++
T Consensus       249 ~~~~~~itG~~i~vdGG~~~s  269 (269)
T 4dmm_A          249 DPAAAYITGQVINIDGGLVMA  269 (269)
T ss_dssp             CGGGGGCCSCEEEESTTSCCC
T ss_pred             CcccCCCcCCEEEECCCeecC
Confidence            7 7889999999999998763

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=1.2e-49  Score=333.97  Aligned_cols=250  Identities=25%  Similarity=0.382  Sum_probs=222.9

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++|++|||||++|||+++|++|+++|++|++++ +.++.++..+++....  +.++.++.+|+++.+  +++++++++.
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~--~v~~~~~~~~  100 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT--GRRCLPLSMDVRAPP--AVMAAVDQAL  100 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH--SSCEEEEECCTTCHH--HHHHHHHHHH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc--CCcEEEEEcCCCCHH--HHHHHHHHHH
Confidence            6899999999999999999999999999999999 6667777777765433  358999999999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.+|++|++|||||. ....++.+.+.++|+.++++|+.++++++++++|.|.+++ .|+||++||..+..+  .++...
T Consensus       101 ~~~g~id~lv~nAg~-~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~~  176 (277)
T 4fc7_A          101 KEFGRIDILINCAAG-NFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNRG--QALQVH  176 (277)
T ss_dssp             HHHSCCCEEEECCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHHHT--CTTCHH
T ss_pred             HHcCCCCEEEECCcC-CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCC--CCCcHH
Confidence            999999999999997 4557788899999999999999999999999999998766 699999999998877  688999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc-ccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV-GQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      |+++|+|++.|+++++.|++++|||||+|+||+|.|++..... .............|++|+++|+ |+|+.++||+|+.
T Consensus       177 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dvA~~v~fL~s~~  255 (277)
T 4fc7_A          177 AGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKT-EIAHSVLYLASPL  255 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHH-HHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHH-HHHHHHHHHcCCc
Confidence            9999999999999999999999999999999999998643322 2344555666788999999998 9999999999998


Q ss_pred             CCcccccEEEEcCCccccCCC
Q 024517          241 SRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      ++++||++|.+|||.+++.|+
T Consensus       256 ~~~itG~~i~vdGG~~~~~~e  276 (277)
T 4fc7_A          256 ASYVTGAVLVADGGAWLTFPN  276 (277)
T ss_dssp             GTTCCSCEEEESTTHHHHCCC
T ss_pred             cCCcCCCEEEECCCcccCCCC
Confidence            999999999999999988765

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=4.1e-49  Score=325.29  Aligned_cols=243  Identities=24%  Similarity=0.396  Sum_probs=218.4

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-c-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-N-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +.+|++|||||++|||+++|++|+++|++|++++ + .++.+++.+++...   +.++.++.+|++|.+  +++++++++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~--~v~~~~~~~   76 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK---GVDSFAIQANVADAD--EVKAMIKEV   76 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TSCEEEEECCTTCHH--HHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCcEEEEEccCCCHH--HHHHHHHHH
Confidence            4689999999999999999999999999999887 3 35666677776554   468899999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||||.. ...++.+.+.++|+..+++|+.++++++++++|+|.+++ .|+||++||..+..+  .++..
T Consensus        77 ~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~  152 (246)
T 3osu_A           77 VSQFGSLDVLVNNAGIT-RDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGAVG--NPGQA  152 (246)
T ss_dssp             HHHHSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHC--CTTCH
T ss_pred             HHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCC--CCCCh
Confidence            99999999999999984 557788899999999999999999999999999998876 799999999998877  68899


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.|+++++.|++++|||||+|+||++.|++....  .+..........|++++++|+ |+|+.++||+++.
T Consensus       153 ~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~~~-dva~~v~~l~s~~  229 (246)
T 3osu_A          153 NYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL--SDELKEQMLTQIPLARFGQDT-DIANTVAFLASDK  229 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS--CHHHHHHHHTTCTTCSCBCHH-HHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc--CHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCcc
Confidence            9999999999999999999999999999999999999987654  344556667788999999998 9999999999999


Q ss_pred             CCcccccEEEEcCCccc
Q 024517          241 SRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~  257 (266)
                      .+++||+.|.+|||.++
T Consensus       230 ~~~itG~~i~vdgG~~~  246 (246)
T 3osu_A          230 AKYITGQTIHVNGGMYM  246 (246)
T ss_dssp             GTTCCSCEEEESTTSCC
T ss_pred             ccCCCCCEEEeCCCccC
Confidence            99999999999999753

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=5.2e-49  Score=328.97  Aligned_cols=243  Identities=24%  Similarity=0.378  Sum_probs=214.4

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-c-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-N-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ + .+..+++.+++...   +.++.++.+|++|.+  ++++++++
T Consensus        15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~--~v~~~~~~   89 (270)
T 3is3_A           15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL---GSDAIAIKADIRQVP--EIVKLFDQ   89 (270)
T ss_dssp             CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTSHH--HHHHHHHH
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCcEEEEEcCCCCHH--HHHHHHHH
Confidence            47899999999999999999999999999999987 4 34566666666554   468999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc-cccCCCCC
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG-AERGLYPG  158 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~-~~~~~~~~  158 (266)
                      +.+.+|++|++|||||.. ...++.+.+.++|+..+++|+.++++++++++|+|.+   +|+||++||..+ ..+  .++
T Consensus        90 ~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~--~~~  163 (270)
T 3is3_A           90 AVAHFGHLDIAVSNSGVV-SFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE---GGRIVLTSSNTSKDFS--VPK  163 (270)
T ss_dssp             HHHHHSCCCEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCTTTTTCC--CTT
T ss_pred             HHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCeEEEEeCchhccCC--CCC
Confidence            999999999999999984 5678888999999999999999999999999999976   589999999874 334  588


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccc----------cccHHHHHHHhhccCCCCCCCChhh
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA----------VGQERAVKLVREAAPLHRWLDVKND  228 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~d  228 (266)
                      ...|+++|++++.|+++++.|++++|||||+|+||+|+|++....          ...+..........|++|+++|+ |
T Consensus       164 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-d  242 (270)
T 3is3_A          164 HSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQ-D  242 (270)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHH-H
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHH-H
Confidence            999999999999999999999999999999999999999987532          12344455566788999999998 9


Q ss_pred             HHHHHHHHccCCCCcccccEEEEcCCcc
Q 024517          229 LASTVIYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       229 va~~~~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      +|+.++||+|+.++++||+.|.+|||.+
T Consensus       243 vA~~v~~L~s~~~~~itG~~i~vdGG~~  270 (270)
T 3is3_A          243 VANVVGFLVSKEGEWVNGKVLTLDGGAA  270 (270)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHcCCccCCccCcEEEeCCCCC
Confidence            9999999999999999999999999964

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=3.9e-49  Score=331.18  Aligned_cols=245  Identities=19%  Similarity=0.266  Sum_probs=217.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++.+.   +.++.++.+|++|.+  +++++++++.
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~d~~--~v~~~~~~~~   96 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA---GHDVDGSSCDVTSTD--EVHAAVAAAV   96 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---TCCEEEEECCTTCHH--HHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEECCCCCHH--HHHHHHHHHH
Confidence            4689999999999999999999999999999999 667777777777654   468999999999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHH--HHhccCCCCeEEEEecccccccCCCCCc
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR--RMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+|++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.++|  .|.+++ .|+||++||..+..+  .++.
T Consensus        97 ~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~~~--~~~~  172 (279)
T 3sju_A           97 ERFGPIGILVNSAGRN-GGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGKQG--VMYA  172 (279)
T ss_dssp             HHHCSCCEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGTSC--CTTC
T ss_pred             HHcCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhccC--CCCC
Confidence            9999999999999984 557788899999999999999999999999999  577666 699999999998877  6889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc---------ccHHHHHHHhhccCCCCCCCChhhHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV---------GQERAVKLVREAAPLHRWLDVKNDLA  230 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva  230 (266)
                      ..|+++|++++.|+++++.|++++|||||+|+||+|+|++.....         ..++....+....|++|+++|+ |+|
T Consensus       173 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA  251 (279)
T 3sju_A          173 APYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPE-EVA  251 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHH-HHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHH-HHH
Confidence            999999999999999999999999999999999999999875432         2345556677789999999998 999


Q ss_pred             HHHHHHccCCCCcccccEEEEcCCccc
Q 024517          231 STVIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +.++||+++.++++|||.|.+|||.+.
T Consensus       252 ~~v~~L~s~~a~~itG~~i~vdGG~~~  278 (279)
T 3sju_A          252 GLVGYLVTDAAASITAQALNVCGGLGN  278 (279)
T ss_dssp             HHHHHHTSSGGGGCCSCEEEESTTCCC
T ss_pred             HHHHHHhCccccCcCCcEEEECCCccC
Confidence            999999999999999999999999875

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.8e-49  Score=329.17  Aligned_cols=242  Identities=20%  Similarity=0.311  Sum_probs=206.4

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe--cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG--NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |.+++|++|||||++|||+++|++|+++|++|++++  +.+..+++.+++...   +.++.++.+|+++.+  +++++++
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~v~~~~~   97 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA---GGKALTAQADVSDPA--AVRRLFA   97 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT---TCCEEEEECCTTCHH--HHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCeEEEEEcCCCCHH--HHHHHHH
Confidence            556899999999999999999999999999999985  445566666666544   468999999999999  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++.+.++++|++|||||. ....++.+.+.++|+.++++|+.+++.+++.++|+|++   +|+||++||..+..+  .++
T Consensus        98 ~~~~~~g~iD~lvnnAG~-~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~--~~~  171 (267)
T 3u5t_A           98 TAEEAFGGVDVLVNNAGI-MPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV---GGRIINMSTSQVGLL--HPS  171 (267)
T ss_dssp             HHHHHHSCEEEEEECCCC-CCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCTHHHHC--CTT
T ss_pred             HHHHHcCCCCEEEECCCC-CCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCeEEEEeChhhccC--CCC
Confidence            999999999999999998 45678888999999999999999999999999999965   489999999988776  688


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ...|+++|+|++.|+++++.|++++|||||+|+||+|+|++..... .++....+....|++|+++|+ |+|+.++||++
T Consensus       172 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~pe-dvA~~v~~L~s  249 (267)
T 3u5t_A          172 YGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGK-SDEVRDRFAKLAPLERLGTPQ-DIAGAVAFLAG  249 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC------------CHHHHHTSSTTCSCBCHH-HHHHHHHHHHS
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccC-CHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhC
Confidence            9999999999999999999999999999999999999999876532 233445566788999999998 99999999999


Q ss_pred             CCCCcccccEEEEcCCc
Q 024517          239 DGSRYMTGTTIYVDGAQ  255 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~  255 (266)
                      +.++++|||.|.+|||.
T Consensus       250 ~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          250 PDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             TTTTTCCSEEEEESSSC
T ss_pred             ccccCccCCEEEeCCCc
Confidence            99999999999999995

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-48  Score=322.63  Aligned_cols=246  Identities=21%  Similarity=0.314  Sum_probs=222.7

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.++.++..+++.+.   +.++.++.+|+++.+  ++++++++
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~   75 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK---GFKARGLVLNISDIE--SIQNFFAE   75 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT---TCCEEEEECCTTCHH--HHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEEecCCCHH--HHHHHHHH
Confidence            899999999999999999999999999999999999 667777777777654   468999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.++|.|.+++ .|+||++||..+..+  .++.
T Consensus        76 ~~~~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~  151 (247)
T 3lyl_A           76 IKAENLAIDILVNNAGIT-RDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-WGRIISIGSVVGSAG--NPGQ  151 (247)
T ss_dssp             HHHTTCCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHC--CTTC
T ss_pred             HHHHcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccC--CCCc
Confidence            999999999999999984 556778889999999999999999999999999998876 699999999998877  6889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|+++++.|++++||++|+|+||++.|++....  .+..........|.+++.+|+ |+|+.+.+|+++
T Consensus       152 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~-dva~~i~~l~s~  228 (247)
T 3lyl_A          152 TNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL--TDEQKSFIATKIPSGQIGEPK-DIAAAVAFLASE  228 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS--CHHHHHHHHTTSTTCCCBCHH-HHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc--cHHHHHHHhhcCCCCCCcCHH-HHHHHHHHHhCC
Confidence            99999999999999999999999999999999999999998764  344455566788999999988 999999999999


Q ss_pred             CCCcccccEEEEcCCcccc
Q 024517          240 GSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~  258 (266)
                      ..++++|+.|.+|||.+++
T Consensus       229 ~~~~~tG~~i~vdgG~~~~  247 (247)
T 3lyl_A          229 EAKYITGQTLHVNGGMYMA  247 (247)
T ss_dssp             GGTTCCSCEEEESTTSSCC
T ss_pred             CcCCccCCEEEECCCEecC
Confidence            8999999999999998753

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=8e-49  Score=328.55  Aligned_cols=244  Identities=20%  Similarity=0.262  Sum_probs=216.1

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++...   +.++.++.+|+++.+  ++++++++
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~--~~~~~~~~  103 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS---GGTAQELAGDLSEAG--AGTDLIER  103 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT---TCCEEEEECCTTSTT--HHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc---CCeEEEEEecCCCHH--HHHHHHHH
Confidence            357899999999999999999999999999999999 778888888887654   468999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+. +++|++|||||.. ...++.+.+.++|+.++++|+.+++.++++++|+|.+++ .|+||++||..+..+  .+..
T Consensus       104 ~~~~-g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~--~~~~  178 (275)
T 4imr_A          104 AEAI-APVDILVINASAQ-INATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQLRP--KSVV  178 (275)
T ss_dssp             HHHH-SCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC--CTTB
T ss_pred             HHHh-CCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCC--CCCc
Confidence            9887 9999999999984 556788899999999999999999999999999998876 799999999998775  5778


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-cHHHHHHHhhcc-CCCCCCCChhhHHHHHHHHc
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-QERAVKLVREAA-PLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~dva~~~~~l~  237 (266)
                      ..|+++|+|++.|+++++.|++++|||||+|+||+|+|++...... ..+......... |++|+++|+ |+|+.++||+
T Consensus       179 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~fL~  257 (275)
T 4imr_A          179 TAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPE-EMVGAALFLA  257 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGG-GGHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHH-HHHHHHHHHc
Confidence            8899999999999999999999999999999999999998755321 222333333344 899999998 9999999999


Q ss_pred             cCCCCcccccEEEEcCCc
Q 024517          238 SDGSRYMTGTTIYVDGAQ  255 (266)
Q Consensus       238 s~~~~~~~G~~i~~dgG~  255 (266)
                      |+.++++|||.|.+|||+
T Consensus       258 s~~a~~itG~~i~vdGG~  275 (275)
T 4imr_A          258 SEACSFMTGETIFLTGGY  275 (275)
T ss_dssp             SGGGTTCCSCEEEESSCC
T ss_pred             CcccCCCCCCEEEeCCCC
Confidence            999999999999999994

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=6.8e-49  Score=329.45  Aligned_cols=247  Identities=23%  Similarity=0.302  Sum_probs=209.8

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec--------------ccccHHHHHHHhcccCCCCCeEEEEEecCC
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN--------------ERRLSSVAEKMMGSLKGGQPVEVVGLDMEE   67 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   67 (266)
                      ++++|++|||||++|||+++|++|+++|++|+++++              .+.+++..+.+...   +.++.++.+|++|
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~   84 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA---NRRIVAAVVDTRD   84 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT---TCCEEEEECCTTC
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc---CCeEEEEECCCCC
Confidence            578999999999999999999999999999999874              22334444444432   4689999999999


Q ss_pred             CchHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEec
Q 024517           68 DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTS  147 (266)
Q Consensus        68 ~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss  147 (266)
                      .+  +++++++++.+.++++|++|||||.. ...++.+.+.++|+.++++|+.+++.++++++|+|.+++++|+||++||
T Consensus        85 ~~--~v~~~~~~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS  161 (277)
T 3tsc_A           85 FD--RLRKVVDDGVAALGRLDIIVANAGVA-APQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISS  161 (277)
T ss_dssp             HH--HHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             HH--HHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence            99  99999999999999999999999984 5567888999999999999999999999999999988654689999999


Q ss_pred             ccccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc---------HHHHHHHhhccC
Q 024517          148 IIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ---------ERAVKLVREAAP  218 (266)
Q Consensus       148 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~---------~~~~~~~~~~~~  218 (266)
                      ..+..+  .++...|+++|++++.|+++++.|++++|||||+|+||+|+|++.......         +..........|
T Consensus       162 ~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  239 (277)
T 3tsc_A          162 AAGMKM--QPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLP  239 (277)
T ss_dssp             GGGTSC--CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSS
T ss_pred             HhhCCC--CCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccC
Confidence            998877  688999999999999999999999999999999999999999987542110         111112223445


Q ss_pred             CCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          219 LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       219 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      . ++.+|+ |+|+.++||+|+.++++||+.|.+|||.+.+
T Consensus       240 ~-r~~~pe-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  277 (277)
T 3tsc_A          240 D-WVAEPE-DIADTVCWLASDESRKVTAAQIPVDQGSTQY  277 (277)
T ss_dssp             C-SCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             C-CCCCHH-HHHHHHHHHhCccccCCcCCEEeeCCCcccC
Confidence            4 677777 9999999999999999999999999998753

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.2e-48  Score=326.77  Aligned_cols=242  Identities=23%  Similarity=0.373  Sum_probs=214.1

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +. ++.+++.+++.+.   +.++.++.+|++|.+  +++++++
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~Dv~d~~--~v~~~~~  101 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA---GGRAVAIRADNRDAE--AIEQAIR  101 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTCHH--HHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCcEEEEECCCCCHH--HHHHHHH
Confidence            468899999999999999999999999999999987 43 5566666776544   468999999999999  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++.+.+|++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++   .|+||++||..+.... .++
T Consensus       102 ~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~---~g~iv~isS~~~~~~~-~~~  176 (271)
T 3v2g_A          102 ETVEALGGLDILVNSAGIW-HSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD---GGRIITIGSNLAELVP-WPG  176 (271)
T ss_dssp             HHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCGGGTCCC-STT
T ss_pred             HHHHHcCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEeChhhccCC-CCC
Confidence            9999999999999999984 5578888999999999999999999999999999965   5899999998776543 578


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ...|+++|++++.|+++++.|++++|||||+|+||+|+|++.....   ..........|.+++++|+ |+|+.++||++
T Consensus       177 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~r~~~pe-dvA~~v~fL~s  252 (271)
T 3v2g_A          177 ISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG---DHAEAQRERIATGSYGEPQ-DIAGLVAWLAG  252 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC---SSHHHHHHTCTTSSCBCHH-HHHHHHHHHHS
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc---hhHHHHHhcCCCCCCCCHH-HHHHHHHHHhC
Confidence            8999999999999999999999999999999999999999976532   2234455678999999998 99999999999


Q ss_pred             CCCCcccccEEEEcCCcc
Q 024517          239 DGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~  256 (266)
                      +.++++|||.|.+|||.+
T Consensus       253 ~~~~~itG~~i~vdGG~~  270 (271)
T 3v2g_A          253 PQGKFVTGASLTIDGGAN  270 (271)
T ss_dssp             GGGTTCCSCEEEESTTTT
T ss_pred             cccCCccCCEEEeCcCcc
Confidence            999999999999999975

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=4.3e-49  Score=327.52  Aligned_cols=250  Identities=21%  Similarity=0.324  Sum_probs=203.2

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe--cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG--NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++  +.+..++..+++.+.   +.++.++.+|+++.+  +++++++
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~--~v~~~~~   78 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL---GRSALAIKADLTNAA--EVEAAIS   78 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT---TSCCEEEECCTTCHH--HHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCceEEEEcCCCCHH--HHHHHHH
Confidence            357899999999999999999999999999999984  445566666666543   467899999999999  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccc-ccCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGA-ERGLYP  157 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~  157 (266)
                      ++.+.+|++|++|||||......++.+.+.++|+.++++|+.+++.++++++|+|.+   +|+||++||..+. .+  .+
T Consensus        79 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~--~~  153 (259)
T 3edm_A           79 AAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK---GGAIVTFSSQAGRDGG--GP  153 (259)
T ss_dssp             HHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHCC--ST
T ss_pred             HHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCEEEEEcCHHhccCC--CC
Confidence            999999999999999998546678889999999999999999999999999999976   5899999999887 34  58


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      +...|+++|++++.|+++++.|+++. ||||+|+||+|+|++...... ++....+....|++|+++|+ |+|+.++||+
T Consensus       154 ~~~~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~p~~r~~~pe-dva~~v~~L~  230 (259)
T 3edm_A          154 GALAYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTK-PEVRERVAGATSLKREGSSE-DVAGLVAFLA  230 (259)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-----------------------CCBCHH-HHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccC-hHHHHHHHhcCCCCCCcCHH-HHHHHHHHHc
Confidence            88999999999999999999999986 999999999999998866432 33445556778999999988 9999999999


Q ss_pred             cCCCCcccccEEEEcCCccccCCCcc
Q 024517          238 SDGSRYMTGTTIYVDGAQSITRPRMR  263 (266)
Q Consensus       238 s~~~~~~~G~~i~~dgG~~~~~~~~~  263 (266)
                      ++.++++||+.|.+|||.+.+.+.-+
T Consensus       231 s~~~~~itG~~i~vdGg~~~~~~~~~  256 (259)
T 3edm_A          231 SDDAAYVTGACYDINGGVLFSEGHHH  256 (259)
T ss_dssp             SGGGTTCCSCEEEESBCSSBC-----
T ss_pred             CccccCccCCEEEECCCcCCCCCCCC
Confidence            99999999999999999999887654

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=3e-48  Score=326.14  Aligned_cols=247  Identities=18%  Similarity=0.247  Sum_probs=211.0

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecc-------------cccHHHHHHHhcccCCCCCeEEEEEecCC
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-------------RRLSSVAEKMMGSLKGGQPVEVVGLDMEE   67 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   67 (266)
                      +++++|++|||||++|||+++|++|+++|++|+++++.             +.+++..+.+...   +.++.++.+|+++
T Consensus         6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~   82 (281)
T 3s55_A            6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT---GRRCISAKVDVKD   82 (281)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT---TCCEEEEECCTTC
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc---CCeEEEEeCCCCC
Confidence            35789999999999999999999999999999999942             3344444444433   4689999999999


Q ss_pred             CchHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEec
Q 024517           68 DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTS  147 (266)
Q Consensus        68 ~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss  147 (266)
                      .+  +++++++++.+.+|++|++|||||. ....++.+.+.++|+.++++|+.++++++++++|+|.+++ .|+||++||
T Consensus        83 ~~--~v~~~~~~~~~~~g~id~lv~nAg~-~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  158 (281)
T 3s55_A           83 RA--ALESFVAEAEDTLGGIDIAITNAGI-STIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSS  158 (281)
T ss_dssp             HH--HHHHHHHHHHHHHTCCCEEEECCCC-CCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             HH--HHHHHHHHHHHhcCCCCEEEECCCC-CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECC
Confidence            99  9999999999999999999999998 4557788899999999999999999999999999998876 699999999


Q ss_pred             ccccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc------------cHHHHHH--H
Q 024517          148 IIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG------------QERAVKL--V  213 (266)
Q Consensus       148 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~------------~~~~~~~--~  213 (266)
                      ..+..+  .++...|+++|++++.|+++++.|++++|||||+|+||+|+||+......            .......  .
T Consensus       159 ~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (281)
T 3s55_A          159 MLGHSA--NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFAS  236 (281)
T ss_dssp             GGGGSC--CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHH
T ss_pred             hhhcCC--CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHh
Confidence            998877  68899999999999999999999999999999999999999998753110            0111111  1


Q ss_pred             hhccCCCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          214 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       214 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      ....| +++++|+ |+|+.++||+++.++++||+.|.+|||.+.+
T Consensus       237 ~~~~~-~~~~~p~-dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          237 LHLQY-APFLKPE-EVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             HCSSS-CSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             hhccC-cCCCCHH-HHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            22334 7788887 9999999999999999999999999998764

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=1.6e-48  Score=330.02  Aligned_cols=249  Identities=21%  Similarity=0.276  Sum_probs=218.2

Q ss_pred             CCCCCcEEEEecCCC--chHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGD--EISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~--giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |++++|++|||||++  |||+++|++|+++|++|+++++.++..+..+++.+..   ..+.++.||++|.+  +++++++
T Consensus        26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~--~v~~~~~  100 (296)
T 3k31_A           26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL---GVKLTVPCDVSDAE--SVDNMFK  100 (296)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH---TCCEEEECCTTCHH--HHHHHHH
T ss_pred             hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc---CCeEEEEcCCCCHH--HHHHHHH
Confidence            568899999999996  9999999999999999999995444444444443332   35689999999999  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCC---CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC
Q 024517           79 KACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL  155 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~  155 (266)
                      ++.+.+|++|++|||||....   ..++.+.+.++|+..+++|+.+++.+++.++|+|.+   +|+||++||..+..+  
T Consensus       101 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~IV~isS~~~~~~--  175 (296)
T 3k31_A          101 VLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN---GGSILTLSYYGAEKV--  175 (296)
T ss_dssp             HHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGGGTSC--
T ss_pred             HHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCEEEEEEehhhccC--
Confidence            999999999999999998432   267788999999999999999999999999999976   589999999998877  


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      .+++..|+++|+|++.|+++++.|++++|||||+|+||+|+|++..................|++|+++|+ |+|+.++|
T Consensus       176 ~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~f  254 (296)
T 3k31_A          176 VPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLD-DVGGAALY  254 (296)
T ss_dssp             CTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHH-HHHHHHHH
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHH-HHHHHHHH
Confidence            68899999999999999999999999999999999999999999876544445556667788999999998 99999999


Q ss_pred             HccCCCCcccccEEEEcCCccccCC
Q 024517          236 LISDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                      |+++.++++||++|.+|||.++...
T Consensus       255 L~s~~a~~itG~~i~vdGG~~~~~~  279 (296)
T 3k31_A          255 LLSDLGRGTTGETVHVDCGYHVVGM  279 (296)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGCSS
T ss_pred             HcCCccCCccCCEEEECCCccccCC
Confidence            9999899999999999999988754

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=6.6e-49  Score=325.70  Aligned_cols=243  Identities=22%  Similarity=0.334  Sum_probs=214.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.++++++.+++      +.++.++.+|++|.+  +++++++++
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~~~~--~v~~~~~~~   76 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF------GPRVHALRSDIADLN--EIAVLGAAA   76 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------GGGEEEEECCTTCHH--HHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCcceEEEccCCCHH--HHHHHHHHH
Confidence            36899999999999999999999999999999999 666666666555      257899999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||||. ....++.+.+.++|++.+++|+.++++++++++|+|++   +|+||++||..+..+  .++..
T Consensus        77 ~~~~g~id~lv~nAg~-~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~--~~~~~  150 (255)
T 4eso_A           77 GQTLGAIDLLHINAGV-SELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE---GGSIVFTSSVADEGG--HPGMS  150 (255)
T ss_dssp             HHHHSSEEEEEECCCC-CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCGGGSSB--CTTBH
T ss_pred             HHHhCCCCEEEECCCC-CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc---CCEEEEECChhhcCC--CCCch
Confidence            9999999999999998 45677888999999999999999999999999999865   489999999998877  68999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc----HHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ----ERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      .|+++|++++.|+++++.|++++|||||+|+||+|+||+.......    ..+........|.+|+++|+ |+|+.++||
T Consensus       151 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~~L  229 (255)
T 4eso_A          151 VYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTAD-EVARAVLFL  229 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHH-HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHH-HHHHHHHHH
Confidence            9999999999999999999999999999999999999987542211    22334455678999999998 999999999


Q ss_pred             ccCCCCcccccEEEEcCCccccCC
Q 024517          237 ISDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                      +++ ++++||+.|.+|||.+.+-.
T Consensus       230 ~s~-~~~itG~~i~vdGG~~~~l~  252 (255)
T 4eso_A          230 AFE-ATFTTGAKLAVDGGLGQKLS  252 (255)
T ss_dssp             HHT-CTTCCSCEEEESTTTTTTBC
T ss_pred             cCc-CcCccCCEEEECCCccccCc
Confidence            998 89999999999999887644

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.8e-49  Score=330.80  Aligned_cols=244  Identities=25%  Similarity=0.366  Sum_probs=211.8

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++      +.++.++.+|++|++  +++++++++
T Consensus        26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~d~~--~v~~~~~~~   97 (277)
T 3gvc_A           26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI------GCGAAACRVDVSDEQ--QIIAMVDAC   97 (277)
T ss_dssp             -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH------CSSCEEEECCTTCHH--HHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------CCcceEEEecCCCHH--HHHHHHHHH
Confidence            47899999999999999999999999999999999 666666666655      357899999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++||..+..+  .++..
T Consensus        98 ~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~--~~~~~  173 (277)
T 3gvc_A           98 VAAFGGVDKLVANAGVV-HLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-GGAIVNLSSLAGQVA--VGGTG  173 (277)
T ss_dssp             HHHHSSCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSC--CTTBH
T ss_pred             HHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccC--CCCch
Confidence            99999999999999984 557788899999999999999999999999999998876 799999999998877  68899


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--cHHHHHHHhh---ccCCCCCCCChhhHHHHHHH
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKLVRE---AAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~dva~~~~~  235 (266)
                      .|+++|++++.|+++++.|++++|||||+|+||+|+||+......  ..........   ..|.+|+++|+ |+|+.++|
T Consensus       174 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pe-dvA~~v~~  252 (277)
T 3gvc_A          174 AYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPE-EMAGIVVF  252 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHH-HHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHH-HHHHHHHH
Confidence            999999999999999999999999999999999999998654322  1111111112   45678888887 99999999


Q ss_pred             HccCCCCcccccEEEEcCCcccc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      |+++.++++|||.|.+|||.+.+
T Consensus       253 L~s~~a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          253 LLSDDASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGS
T ss_pred             HcCCccCCccCcEEEECCcchhc
Confidence            99999999999999999998764

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-48  Score=327.48  Aligned_cols=246  Identities=24%  Similarity=0.320  Sum_probs=209.7

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec--------------ccccHHHHHHHhcccCCCCCeEEEEEecCC
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN--------------ERRLSSVAEKMMGSLKGGQPVEVVGLDMEE   67 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   67 (266)
                      ++++|++|||||++|||+++|++|+++|++|+++++              .+++++..+++...   +.++.++.+|++|
T Consensus        12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~   88 (280)
T 3pgx_A           12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ---GRKALTRVLDVRD   88 (280)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT---TCCEEEEECCTTC
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc---CCeEEEEEcCCCC
Confidence            578999999999999999999999999999999884              23445555555433   4689999999999


Q ss_pred             CchHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEec
Q 024517           68 DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTS  147 (266)
Q Consensus        68 ~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss  147 (266)
                      .+  +++++++++.+.+|++|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|+|.+++.+|+||++||
T Consensus        89 ~~--~v~~~~~~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  165 (280)
T 3pgx_A           89 DA--ALRELVADGMEQFGRLDVVVANAGVL-SWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSS  165 (280)
T ss_dssp             HH--HHHHHHHHHHHHHCCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred             HH--HHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence            99  99999999999999999999999984 5567888999999999999999999999999999987654689999999


Q ss_pred             ccccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHH------HH--HhhccCC
Q 024517          148 IIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV------KL--VREAAPL  219 (266)
Q Consensus       148 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~------~~--~~~~~~~  219 (266)
                      ..+..+  .++...|+++|++++.|+++++.|++++|||||+|+||+|+|++.......+...      ..  .....|.
T Consensus       166 ~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (280)
T 3pgx_A          166 SAGLKA--TPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPN  243 (280)
T ss_dssp             GGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCS
T ss_pred             hhhccC--CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCCC
Confidence            998877  6889999999999999999999999999999999999999999875421111110      00  1123344


Q ss_pred             CCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccc
Q 024517          220 HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       220 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                       ++.+|+ |+|+.++||+++.++++|||.|.+|||.+.
T Consensus       244 -r~~~p~-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  279 (280)
T 3pgx_A          244 -GFMTAD-EVADVVAWLAGDGSGTLTGTQIPVDKGALK  279 (280)
T ss_dssp             -SCBCHH-HHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred             -CCCCHH-HHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence             577777 999999999999999999999999999865

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.7e-48  Score=327.59  Aligned_cols=248  Identities=21%  Similarity=0.314  Sum_probs=208.9

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-c-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-E-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |++++|++|||||++|||+++|++|+++|++|+++++ . +.+++..+++....  +.++.++.+|++|.+  +++++++
T Consensus        21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~--~v~~~~~   96 (281)
T 3v2h_A           21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS--SGTVLHHPADMTKPS--EIADMMA   96 (281)
T ss_dssp             -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC--SSCEEEECCCTTCHH--HHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc--CCcEEEEeCCCCCHH--HHHHHHH
Confidence            4678999999999999999999999999999999984 3 45566666665432  358999999999999  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++.+.+|++|++|||||. ....++.+.+.++|+.++++|+.+++.++++++|+|.+++ .|+||++||..+..+  .++
T Consensus        97 ~~~~~~g~iD~lv~nAg~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~  172 (281)
T 3v2h_A           97 MVADRFGGADILVNNAGV-QFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGLVA--SPF  172 (281)
T ss_dssp             HHHHHTSSCSEEEECCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC--CTT
T ss_pred             HHHHHCCCCCEEEECCCC-CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCcccccC--CCC
Confidence            999999999999999998 4567788899999999999999999999999999998876 699999999998877  688


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccH----------HHHHHHhhccCCCCCCCChhh
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE----------RAVKLVREAAPLHRWLDVKND  228 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~d  228 (266)
                      ...|+++|++++.|+++++.|++++|||||+|+||+|+|++........          .....+....|.+++++|+ |
T Consensus       173 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~e-d  251 (281)
T 3v2h_A          173 KSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVE-Q  251 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHH-H
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHH-H
Confidence            9999999999999999999999999999999999999999876543211          1112345678899999998 9


Q ss_pred             HHHHHHHHccCCCCcccccEEEEcCCccc
Q 024517          229 LASTVIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       229 va~~~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +|+.++||+++.++++||+.|.+|||++.
T Consensus       252 vA~~v~~L~s~~a~~itG~~i~vdGG~~~  280 (281)
T 3v2h_A          252 VASLALYLAGDDAAQITGTHVSMDGGWTA  280 (281)
T ss_dssp             HHHHHHHHHSSGGGGCCSCEEEESTTGGG
T ss_pred             HHHHHHHHcCCCcCCCCCcEEEECCCccC
Confidence            99999999999999999999999999764

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=5.2e-48  Score=323.43  Aligned_cols=248  Identities=24%  Similarity=0.356  Sum_probs=212.7

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++...   +.++.++.+|+++++  ++++++++
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~   91 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK---GLNVEGSVCDLLSRT--ERDKLMQT   91 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHH--HHHHHHHH
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEECCCCCHH--HHHHHHHH
Confidence            567899999999999999999999999999999999 666666666666543   357899999999998  99999999


Q ss_pred             HHHHh-CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           80 ACQIL-GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        80 ~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      +.+.+ +++|++|||||.. ...++.+.+.++|+..+++|+.+++.++++++|+|++++ .|+||++||..+..+  .++
T Consensus        92 ~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~--~~~  167 (273)
T 1ae1_A           92 VAHVFDGKLNILVNNAGVV-IHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSA--LPS  167 (273)
T ss_dssp             HHHHTTSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSC--CTT
T ss_pred             HHHHcCCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhcCC--CCC
Confidence            99999 9999999999984 556788899999999999999999999999999998766 699999999988776  588


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----cHHHHHHHhhccCCCCCCCChhhHHHHHH
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKLVREAAPLHRWLDVKNDLASTVI  234 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (266)
                      ...|+++|++++.|+++++.|++++|||||+|+||+|+|++......    ............|.+++++|+ |+|+.+.
T Consensus       168 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dvA~~v~  246 (273)
T 1ae1_A          168 VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQ-EVSALIA  246 (273)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHH-HHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHH-HHHHHHH
Confidence            89999999999999999999999999999999999999998754322    223334455668999999988 9999999


Q ss_pred             HHccCCCCcccccEEEEcCCcccc
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      +|+++..++++|+.+.+|||.++.
T Consensus       247 ~l~s~~~~~~tG~~i~vdGG~~~~  270 (273)
T 1ae1_A          247 FLCFPAASYITGQIIWADGGFTAN  270 (273)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHhCccccCcCCCEEEECCCcccC
Confidence            999988899999999999998764

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=3.4e-48  Score=327.59  Aligned_cols=247  Identities=22%  Similarity=0.262  Sum_probs=213.9

Q ss_pred             CCCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDG--DEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      .+++|++|||||+  +|||+++|++|+++|++|+++++.++..+..+++.+..   .++.++.+|++|.+  ++++++++
T Consensus        28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~--~v~~~~~~  102 (293)
T 3grk_A           28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL---GAFVAGHCDVADAA--SIDAVFET  102 (293)
T ss_dssp             TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH---TCEEEEECCTTCHH--HHHHHHHH
T ss_pred             cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc---CCceEEECCCCCHH--HHHHHHHH
Confidence            4789999999999  55999999999999999999995555445555554432   46889999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCC---CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC
Q 024517           80 ACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY  156 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  156 (266)
                      +.+.+|++|++|||||....   ..++.+.+.++|+..+++|+.+++.++++++|+|++   +|+||++||..+..+  .
T Consensus       103 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~Iv~isS~~~~~~--~  177 (293)
T 3grk_A          103 LEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD---GGSILTLTYYGAEKV--M  177 (293)
T ss_dssp             HHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT---CEEEEEEECGGGTSB--C
T ss_pred             HHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCEEEEEeehhhccC--C
Confidence            99999999999999998532   467888999999999999999999999999999975   589999999998877  6


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      +++..|+++|+|++.|+++++.|++++|||||+|+||+|+|++.......+..........|++|+++|+ |+|+.++||
T Consensus       178 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~~L  256 (293)
T 3grk_A          178 PNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTID-EVGDVGLYF  256 (293)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHH-HHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHH-HHHHHHHHH
Confidence            8899999999999999999999999999999999999999998876554455666777889999999998 999999999


Q ss_pred             ccCCCCcccccEEEEcCCccccC
Q 024517          237 ISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      +++.++++||+.|.+|||.++..
T Consensus       257 ~s~~~~~itG~~i~vdGG~~~~~  279 (293)
T 3grk_A          257 LSDLSRSVTGEVHHADSGYHVIG  279 (293)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGBC
T ss_pred             cCccccCCcceEEEECCCcccCC
Confidence            99989999999999999998754

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.7e-48  Score=327.43  Aligned_cols=247  Identities=22%  Similarity=0.327  Sum_probs=195.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe--cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG--NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++  +.+.+++..+++...   +.++.++.+|++|++  ++++++++
T Consensus        26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~--~v~~~~~~  100 (280)
T 4da9_A           26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL---GARVIFLRADLADLS--SHQATVDA  100 (280)
T ss_dssp             CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT---TCCEEEEECCTTSGG--GHHHHHHH
T ss_pred             ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc---CCcEEEEEecCCCHH--HHHHHHHH
Confidence            36799999999999999999999999999999988  344556666666543   468999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCC-CCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCC--CCeEEEEecccccccCCC
Q 024517           80 ACQILGNLDAFVHCYTYEG-KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA--GGSIVFLTSIIGAERGLY  156 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~g~iv~iss~~~~~~~~~  156 (266)
                      +.+.+|++|++|||||... ...++.+.+.++|+.++++|+.++++++++++|+|.+++.  .|+||++||..+..+  .
T Consensus       101 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~--~  178 (280)
T 4da9_A          101 VVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMT--S  178 (280)
T ss_dssp             HHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC--------
T ss_pred             HHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccC--C
Confidence            9999999999999999742 3467888999999999999999999999999999987542  579999999998877  6


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhh-ccCCCCCCCChhhHHHHHHH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE-AAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~  235 (266)
                      ++...|+++|+|++.|+++++.|++++|||||+|+||+|+|++.....  +........ ..|++|+++|+ |+|+.++|
T Consensus       179 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~p~~r~~~pe-dvA~~v~~  255 (280)
T 4da9_A          179 PERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVS--GKYDGLIESGLVPMRRWGEPE-DIGNIVAG  255 (280)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CCBCHH-HHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcc--hhHHHHHhhcCCCcCCcCCHH-HHHHHHHH
Confidence            889999999999999999999999999999999999999999876542  222222333 67889999998 99999999


Q ss_pred             HccCCCCcccccEEEEcCCcccc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      |+++.++++|||+|.+|||.++.
T Consensus       256 L~s~~~~~itG~~i~vdGG~~~~  278 (280)
T 4da9_A          256 LAGGQFGFATGSVIQADGGLSIG  278 (280)
T ss_dssp             HHTSTTGGGTTCEEEESTTCC--
T ss_pred             HhCccccCCCCCEEEECCCcccC
Confidence            99999999999999999998865

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=3.7e-48  Score=325.59  Aligned_cols=246  Identities=19%  Similarity=0.254  Sum_probs=210.6

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++      +.++.++.+|+++.+  ++++++++
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~~~~--~v~~~~~~   72 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH------GGNAVGVVGDVRSLQ--DQKRAAER   72 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT------BTTEEEEECCTTCHH--HHHHHHHH
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc------CCcEEEEEcCCCCHH--HHHHHHHH
Confidence            899999999999999999999999999999999999 555555544443      358999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCC----CCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDP----LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL  155 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~  155 (266)
                      +.+.++++|++|||||......++    .+.+.++|+.++++|+.+++.++++++|+|.+++  |+||++||..+..+  
T Consensus        73 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~--  148 (281)
T 3zv4_A           73 CLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR--GSVVFTISNAGFYP--  148 (281)
T ss_dssp             HHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTSS--
T ss_pred             HHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--CeEEEEecchhccC--
Confidence            999999999999999985433333    2445678999999999999999999999998754  89999999998877  


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--------cHHHHHHHhhccCCCCCCCChh
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--------QERAVKLVREAAPLHRWLDVKN  227 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~  227 (266)
                      .++...|+++|++++.|+++++.|+++. ||||+|+||+|+|++......        .......+....|++|+++|+ 
T Consensus       149 ~~~~~~Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-  226 (281)
T 3zv4_A          149 NGGGPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALE-  226 (281)
T ss_dssp             SSSCHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGG-
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHH-
Confidence            5889999999999999999999999987 999999999999998754211        112345566788999999998 


Q ss_pred             hHHHHHHHHcc-CCCCcccccEEEEcCCccccCC
Q 024517          228 DLASTVIYLIS-DGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       228 dva~~~~~l~s-~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                      |+|+.++||+| +.+.++|||.|.+|||.++...
T Consensus       227 dvA~~v~fL~s~~~~~~itG~~i~vdGG~~~~~~  260 (281)
T 3zv4_A          227 EYTGAYVFFATRGDSLPATGALLNYDGGMGVRGF  260 (281)
T ss_dssp             GGSHHHHHHHSTTTSTTCSSCEEEESSSGGGCCS
T ss_pred             HHHHHHHHhhcccccccccCcEEEECCCCccccc
Confidence            99999999999 7888999999999999988754

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=6.3e-49  Score=332.25  Aligned_cols=246  Identities=20%  Similarity=0.256  Sum_probs=214.1

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecc---cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE---RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAV   77 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~   77 (266)
                      |++++|++|||||++|||+++|++|+++|++|+++++.   +..+++.+.+.+.   +.++.++.+|++|.+  ++++++
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~--~v~~~~  119 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC---GRKAVLLPGDLSDES--FARSLV  119 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT---TCCEEECCCCTTSHH--HHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc---CCcEEEEEecCCCHH--HHHHHH
Confidence            35789999999999999999999999999999998833   2344444444433   468999999999998  999999


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCC
Q 024517           78 DKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP  157 (266)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  157 (266)
                      +++.+.++++|++|||||......++.+.+.++|++.+++|+.++++++++++|+|.+   +|+||++||..+..+  .+
T Consensus       120 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~Iv~isS~~~~~~--~~  194 (294)
T 3r3s_A          120 HKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK---GASIITTSSIQAYQP--SP  194 (294)
T ss_dssp             HHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT---TCEEEEECCGGGTSC--CT
T ss_pred             HHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEEECChhhccC--CC
Confidence            9999999999999999998555567888999999999999999999999999999865   589999999998877  68


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      +...|+++|++++.|+++++.|++++|||||+|+||+|+|++.............+....|++++++|+ |+|+.++||+
T Consensus       195 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dvA~~v~~L~  273 (294)
T 3r3s_A          195 HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPA-ELAPVYVYLA  273 (294)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGG-GGHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHh
Confidence            899999999999999999999999999999999999999998433222333344556778999999998 9999999999


Q ss_pred             cCCCCcccccEEEEcCCccc
Q 024517          238 SDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       238 s~~~~~~~G~~i~~dgG~~~  257 (266)
                      ++.++++||++|.+|||.++
T Consensus       274 s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          274 SQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             SGGGTTCCSCEEEESTTCCC
T ss_pred             CccccCCCCCEEEECCCccC
Confidence            99999999999999999876

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=4.8e-48  Score=321.50  Aligned_cols=249  Identities=25%  Similarity=0.351  Sum_probs=204.2

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.++++++.+++      +.++.++.+|+++.+  ++++++++
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~--~~~~~~~~   76 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI------GDAALAVAADISKEA--DVDAAVEA   76 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------CTTEEEEECCTTSHH--HHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh------CCceEEEEecCCCHH--HHHHHHHH
Confidence            788999999999999999999999999999999999 666666666655      358899999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC---CCCeEEEEecccccccCCC
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK---AGGSIVFLTSIIGAERGLY  156 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~g~iv~iss~~~~~~~~~  156 (266)
                      +.+.++++|++|||||......++.+.+.++|++.+++|+.+++.+++.++|+|.+++   ..++||++||..+..+  .
T Consensus        77 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--~  154 (261)
T 3n74_A           77 ALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRP--R  154 (261)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSC--C
T ss_pred             HHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCC--C
Confidence            9999999999999999855466777889999999999999999999999999998652   1478999999988776  6


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--cHHHHHHHhhccCCCCCCCChhhHHHHHH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKLVREAAPLHRWLDVKNDLASTVI  234 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (266)
                      +....|+++|++++.|+++++.|++++|||||+|+||+++|++......  .++....+....|.+++.+|+ |+|+.++
T Consensus       155 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~  233 (261)
T 3n74_A          155 PNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPD-DLAEAAA  233 (261)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHH-HHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHH-HHHHHHH
Confidence            8899999999999999999999999999999999999999998876432  234445566788999999998 9999999


Q ss_pred             HHccCCCCcccccEEEEcCCccccCC
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                      ||+++..+++||++|.+|||.++..+
T Consensus       234 ~l~s~~~~~itG~~i~vdgG~~~~~~  259 (261)
T 3n74_A          234 FLCSPQASMITGVALDVDGGRSIGGR  259 (261)
T ss_dssp             HHTSGGGTTCCSCEEEESTTTTC---
T ss_pred             HHcCCcccCcCCcEEEecCCcccCCC
Confidence            99999999999999999999998764

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=2.6e-48  Score=324.28  Aligned_cols=246  Identities=20%  Similarity=0.292  Sum_probs=211.5

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+.+++..+++....+ +..+..+.+|+++.+  ++++++  
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~--~~~~~~--   80 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYP-DAILQPVVADLGTEQ--GCQDVI--   80 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCT-TCEEEEEECCTTSHH--HHHHHH--
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-CceEEEEecCCCCHH--HHHHHH--
Confidence            567899999999999999999999999999999999 77777888888876543 257888999999988  776665  


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                        +.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..+  .++.
T Consensus        81 --~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~  154 (267)
T 3t4x_A           81 --EKYPKVDILINNLGIF-EPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAIMP--SQEM  154 (267)
T ss_dssp             --HHCCCCSEEEECCCCC-CCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGTSC--CTTC
T ss_pred             --HhcCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhccC--CCcc
Confidence              4579999999999984 556788899999999999999999999999999998776 699999999998877  6889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc---------cHHHH-HH---HhhccCCCCCCCCh
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---------QERAV-KL---VREAAPLHRWLDVK  226 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~---------~~~~~-~~---~~~~~~~~~~~~~~  226 (266)
                      ..|+++|++++.|+++++.|++++|||||+|+||+++|++......         .++.. ..   .....|++|+++|+
T Consensus       155 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pe  234 (267)
T 3t4x_A          155 AHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPE  234 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHH
Confidence            9999999999999999999999999999999999999997543211         11111 12   22345788999998


Q ss_pred             hhHHHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          227 NDLASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       227 ~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                       |+|++++||+|+.++++|||+|.+|||.+.+
T Consensus       235 -dvA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          235 -EIAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             -HHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             -HHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence             9999999999999999999999999998765

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.4e-48  Score=322.74  Aligned_cols=243  Identities=20%  Similarity=0.280  Sum_probs=196.6

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+..++..+++      +.++.++.+|+++.+  ++++++++
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~~~~--~v~~~~~~   74 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL------GAAVRFRNADVTNEA--DATAALAF   74 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------------CEEEECCTTCHH--HHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh------CCceEEEEccCCCHH--HHHHHHHH
Confidence            678999999999999999999999999999999999 666666666554      257889999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCC----CCCCHHHHHHHHHccchHHHHHHHHHHHHHhcc-----CCCCeEEEEecccc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDP----LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES-----KAGGSIVFLTSIIG  150 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~g~iv~iss~~~  150 (266)
                      +.+.+|++|++|||||.... .++    .+.+.++|++.+++|+.+++.++++++|+|.++     +..|+||++||..+
T Consensus        75 ~~~~~g~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~  153 (257)
T 3tpc_A           75 AKQEFGHVHGLVNCAGTAPG-EKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAA  153 (257)
T ss_dssp             HHHHHSCCCEEEECCCCCCC-CCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH
T ss_pred             HHHHcCCCCEEEECCCCCCC-CccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhh
Confidence            99999999999999998433 333    267889999999999999999999999999874     22689999999998


Q ss_pred             cccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCC-CCCCCChhhH
Q 024517          151 AERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPL-HRWLDVKNDL  229 (266)
Q Consensus       151 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dv  229 (266)
                      ..+  .++...|+++|++++.|+++++.|++++|||||+|+||+|+|++.....  +.....+....|. +|+++|+ |+
T Consensus       154 ~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~~p~~~r~~~~~-dv  228 (257)
T 3tpc_A          154 FDG--QIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMP--QDVQDALAASVPFPPRLGRAE-EY  228 (257)
T ss_dssp             HHC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC----------------CCSSSSCSCBCHH-HH
T ss_pred             ccC--CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCC--HHHHHHHHhcCCCCCCCCCHH-HH
Confidence            877  6889999999999999999999999999999999999999999986542  3344555667788 8888888 99


Q ss_pred             HHHHHHHccCCCCcccccEEEEcCCccccC
Q 024517          230 ASTVIYLISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       230 a~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      |+.+.||+++  +++|||.|.+|||.+++.
T Consensus       229 a~~v~~l~s~--~~itG~~i~vdGG~~~~~  256 (257)
T 3tpc_A          229 AALVKHICEN--TMLNGEVIRLDGALRMAP  256 (257)
T ss_dssp             HHHHHHHHHC--TTCCSCEEEESTTCCC--
T ss_pred             HHHHHHHccc--CCcCCcEEEECCCccCCC
Confidence            9999999986  799999999999988753

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=2.3e-47  Score=318.27  Aligned_cols=254  Identities=26%  Similarity=0.336  Sum_probs=223.8

Q ss_pred             CCCCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDG--DEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |++++|++|||||+  +|||+++|++|+++|++|+++++.++..+..+++.+..+. .++.++.+|+++.+  +++++++
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~--~v~~~~~   79 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDR-NDSIILPCDVTNDA--EIETCFA   79 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSS-CCCEEEECCCSSSH--HHHHHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCC-CCceEEeCCCCCHH--HHHHHHH
Confidence            46789999999999  6799999999999999999999655555555555544432 47999999999999  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCC---CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC
Q 024517           79 KACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL  155 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~  155 (266)
                      ++.+.++++|++|||||....   ..++.+.+.++|+..+++|+.+++.+++.++|+|++   +|+||++||..+..+  
T Consensus        80 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~--  154 (266)
T 3oig_A           80 SIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE---GGSIVTLTYLGGELV--  154 (266)
T ss_dssp             HHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGGGTSC--
T ss_pred             HHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC---CceEEEEeccccccc--
Confidence            999999999999999998532   467778899999999999999999999999999874   589999999998877  


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      .++...|+++|+|++.|+++++.|++++||+||+|+||+|+|++..................|.+++.+|+ |+|+.+++
T Consensus       155 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-dva~~v~~  233 (266)
T 3oig_A          155 MPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPE-EVGDTAAF  233 (266)
T ss_dssp             CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHH-HHHHHHHH
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHH-HHHHHHHH
Confidence            68899999999999999999999999999999999999999999877655556666777888999999988 99999999


Q ss_pred             HccCCCCcccccEEEEcCCccccCCCcc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSITRPRMR  263 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~~~~~~  263 (266)
                      |+++..+++||+.|.+|||++...+...
T Consensus       234 l~s~~~~~~tG~~i~vdGG~~~~~~~~~  261 (266)
T 3oig_A          234 LFSDMSRGITGENLHVDSGFHITARLEH  261 (266)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGCCCCC-
T ss_pred             HcCCchhcCcCCEEEECCCeEEeeecCC
Confidence            9999889999999999999998877654

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=5.2e-49  Score=327.56  Aligned_cols=249  Identities=18%  Similarity=0.268  Sum_probs=203.2

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecc----cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE----RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEA   76 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~   76 (266)
                      |++++|++|||||++|||+++|++|+++|++|+++++.    ++++++.+++...   +.++.++.+|++|.+  +++++
T Consensus         7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~--~v~~~   81 (262)
T 3ksu_A            7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ---GAKVALYQSDLSNEE--EVAKL   81 (262)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT---TCEEEEEECCCCSHH--HHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc---CCcEEEEECCCCCHH--HHHHH
Confidence            56789999999999999999999999999999998632    3445555555443   468999999999999  99999


Q ss_pred             HHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC
Q 024517           77 VDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY  156 (266)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  156 (266)
                      ++++.+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.++++++|+|++   .|+||++||..+..+  .
T Consensus        82 ~~~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~iv~isS~~~~~~--~  155 (262)
T 3ksu_A           82 FDFAEKEFGKVDIAINTVGKV-LKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP---NGHIITIATSLLAAY--T  155 (262)
T ss_dssp             HHHHHHHHCSEEEEEECCCCC-CSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE---EEEEEEECCCHHHHH--H
T ss_pred             HHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC---CCEEEEEechhhccC--C
Confidence            999999999999999999984 5577888999999999999999999999999999943   589999999988776  5


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      ++...|+++|+|++.|+++++.|++++|||||+|+||+|+|++..... ............|.+++.+|+ |+|+.++||
T Consensus       156 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~~r~~~pe-dvA~~v~~L  233 (262)
T 3ksu_A          156 GFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQE-TKESTAFHKSQAMGNQLTKIE-DIAPIIKFL  233 (262)
T ss_dssp             CCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-------------CCCCSCCGG-GTHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC-chHHHHHHHhcCcccCCCCHH-HHHHHHHHH
Confidence            788899999999999999999999999999999999999999875533 233344556678889999998 999999999


Q ss_pred             ccCCCCcccccEEEEcCCccccCCCcc
Q 024517          237 ISDGSRYMTGTTIYVDGAQSITRPRMR  263 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~~~~~~~~~  263 (266)
                      +++ ++++||+.|.+|||...+.+.-+
T Consensus       234 ~s~-~~~itG~~i~vdGg~~~~~~~~~  259 (262)
T 3ksu_A          234 TTD-GWWINGQTIFANGGYTTREGHHH  259 (262)
T ss_dssp             HTT-TTTCCSCEEEESTTCCCC-----
T ss_pred             cCC-CCCccCCEEEECCCccCCCcccc
Confidence            998 89999999999999988766543

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=9.8e-48  Score=319.90  Aligned_cols=244  Identities=26%  Similarity=0.413  Sum_probs=214.6

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||++++++|+++|++|++++ +.++++++.+++...   +.++.++.+|+++++  +++++++++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~~   78 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK---GVEARSYVCDVTSEE--AVIGTVDSV   78 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---TSCEEEEECCTTCHH--HHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEecCCCHH--HHHHHHHHH
Confidence            47899999999999999999999999999999999 666667777776543   357899999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||||......++.+.+.++|+..+++|+.+++.++++++|+|.+++ .|+||++||..+..+  .++..
T Consensus        79 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~  155 (262)
T 1zem_A           79 VRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKG--PPNMA  155 (262)
T ss_dssp             HHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSC--CTTBH
T ss_pred             HHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccC--CCCCc
Confidence            999999999999999842556778889999999999999999999999999998766 699999999988776  58889


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccc------------cc-cHH-HHHHHhhccCCCCCCCCh
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA------------VG-QER-AVKLVREAAPLHRWLDVK  226 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~------------~~-~~~-~~~~~~~~~~~~~~~~~~  226 (266)
                      .|+++|++++.|+++++.|++++|||||+|+||+|+|++....            .. .++ ....+....|++|+++|+
T Consensus       156 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~  235 (262)
T 1zem_A          156 AYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDIN  235 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHH
Confidence            9999999999999999999999999999999999999986542            11 122 334445678999999998


Q ss_pred             hhHHHHHHHHccCCCCcccccEEEEcCC
Q 024517          227 NDLASTVIYLISDGSRYMTGTTIYVDGA  254 (266)
Q Consensus       227 ~dva~~~~~l~s~~~~~~~G~~i~~dgG  254 (266)
                       |+|+.++||+++.++++||+.+.+|||
T Consensus       236 -dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          236 -EIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             -GSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             -HHHHHHHHHcCchhcCcCCcEEecCCC
Confidence             999999999999889999999999998

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=8.1e-48  Score=321.26  Aligned_cols=251  Identities=25%  Similarity=0.375  Sum_probs=215.4

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      +++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++.+..+ +.++.++.+|+++.+  ++++++++
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~--~v~~~~~~   85 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAP-DAEVLTTVADVSDEA--QVEAYVTA   85 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCT-TCCEEEEECCTTSHH--HHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CceEEEEEccCCCHH--HHHHHHHH
Confidence            357899999999999999999999999999999999 66666766666654322 357899999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.+|++|++|||||......++.+.+.++|+.++++|+.+++.+++.++|.|++++ .|+||++||..+..+  .++.
T Consensus        86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~  162 (267)
T 1iy8_A           86 TTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRG--IGNQ  162 (267)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSB--CSSB
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhccC--CCCC
Confidence            9999999999999999843326777889999999999999999999999999998776 699999999988776  5888


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccc--c-cc---HHHHHHHhhccCCCCCCCChhhHHHHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA--V-GQ---ERAVKLVREAAPLHRWLDVKNDLASTV  233 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~--~-~~---~~~~~~~~~~~~~~~~~~~~~dva~~~  233 (266)
                      ..|+++|++++.|+++++.|++++|||||+|+||+|+|++....  . .+   ......+....|.+++++|+ |+|+.+
T Consensus       163 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~-dvA~~v  241 (267)
T 1iy8_A          163 SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAP-EIAAVV  241 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHH-HHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHH-HHHHHH
Confidence            99999999999999999999999999999999999999986542  1 11   11111344567888989888 999999


Q ss_pred             HHHccCCCCcccccEEEEcCCcccc
Q 024517          234 IYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       234 ~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      ++|+++..++++|+.+.+|||.+++
T Consensus       242 ~~l~s~~~~~~tG~~i~vdGG~~~~  266 (267)
T 1iy8_A          242 AFLLSDDASYVNATVVPIDGGQSAA  266 (267)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred             HHHcCccccCCCCCEEEECCCcccC
Confidence            9999988899999999999997653

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=1.5e-47  Score=318.48  Aligned_cols=248  Identities=25%  Similarity=0.365  Sum_probs=216.2

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++...   +.++.++.+|+++++  ++++++++
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~   79 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK---GFKVEASVCDLSSRS--ERQELMNT   79 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCEEEEEECCTTCHH--HHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEcCCCCHH--HHHHHHHH
Confidence            568899999999999999999999999999999999 666666666666543   357899999999998  99999999


Q ss_pred             HHHHh-CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           80 ACQIL-GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        80 ~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      +.+.+ +++|++|||||.. ...++.+.+.++|+.++++|+.+++.++++++|+|.+++ .|+||++||..+..+  .++
T Consensus        80 ~~~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~  155 (260)
T 2ae2_A           80 VANHFHGKLNILVNNAGIV-IYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALA--VPY  155 (260)
T ss_dssp             HHHHTTTCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSC--CTT
T ss_pred             HHHHcCCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccC--CCC
Confidence            99999 8999999999984 556777889999999999999999999999999998766 689999999988766  588


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHH---HHhhccCCCCCCCChhhHHHHHHH
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK---LVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      ...|+++|++++.|+++++.|++++||+||+|+||+++|++............   .+....|.+++.+|+ |+|+.+++
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dvA~~v~~  234 (260)
T 2ae2_A          156 EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPK-ELAAMVAF  234 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHH-HHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHH-HHHHHHHH
Confidence            89999999999999999999999999999999999999998654322222222   444567888888888 99999999


Q ss_pred             HccCCCCcccccEEEEcCCcccc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      |+++..++++|+.+.+|||.+++
T Consensus       235 l~s~~~~~~tG~~~~vdgG~~~~  257 (260)
T 2ae2_A          235 LCFPAASYVTGQIIYVDGGLMAN  257 (260)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HcCccccCCCCCEEEECCCcccc
Confidence            99988899999999999998754

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-47  Score=317.72  Aligned_cols=247  Identities=23%  Similarity=0.366  Sum_probs=214.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++.+..  +.++.++.+|+++.+  +++++++++
T Consensus        18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~--~v~~~~~~~   93 (267)
T 1vl8_A           18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY--GVETMAFRCDVSNYE--EVKKLLEAV   93 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--CCCEEEEECCTTCHH--HHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc--CCeEEEEEcCCCCHH--HHHHHHHHH
Confidence            57899999999999999999999999999999999 6666666666662222  357889999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc-ccccCCCCCc
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII-GAERGLYPGA  159 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~-~~~~~~~~~~  159 (266)
                      .+.++++|++|||||.. ...++.+.+.++|+.++++|+.+++.++++++|+|++++ .|+||++||.. +..+  .++.
T Consensus        94 ~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~--~~~~  169 (267)
T 1vl8_A           94 KEKFGKLDTVVNAAGIN-RRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVT--MPNI  169 (267)
T ss_dssp             HHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCC--SSSC
T ss_pred             HHHcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhccC--CCCC
Confidence            99999999999999984 456778889999999999999999999999999998766 68999999988 6655  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|+++++.|+++.||+||+|+||+++|++.......+.....+....|.+++++|+ |+|+.+++|+++
T Consensus       170 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~-dvA~~v~~l~s~  248 (267)
T 1vl8_A          170 SAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPE-DLKGVAVFLASE  248 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGG-GGHHHHHHHHSG
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHH-HHHHHHHHHcCc
Confidence            9999999999999999999999999999999999999998764322233334455667888999998 999999999998


Q ss_pred             CCCcccccEEEEcCCccc
Q 024517          240 GSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~  257 (266)
                      ..++++|+.+.+|||.++
T Consensus       249 ~~~~itG~~i~vdGG~~~  266 (267)
T 1vl8_A          249 EAKYVTGQIIFVDGGWTA  266 (267)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             cccCCcCCeEEECCCCCC
Confidence            889999999999999753

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=7.3e-48  Score=325.28  Aligned_cols=245  Identities=23%  Similarity=0.347  Sum_probs=214.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccc-cHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERR-LSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.+. .++..+.+...   +.++.++.+|++|.+  ++++++++
T Consensus        44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~--~v~~~~~~  118 (291)
T 3ijr_A           44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE---GVKCVLLPGDLSDEQ--HCKDIVQE  118 (291)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT---TCCEEEEESCTTSHH--HHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc---CCcEEEEECCCCCHH--HHHHHHHH
Confidence            46899999999999999999999999999999998 4443 33344444332   468999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||......++.+.+.++|++.+++|+.+++.++++++|+|++   .++||++||..+..+  .++.
T Consensus       119 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~--~~~~  193 (291)
T 3ijr_A          119 TVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ---GDVIINTASIVAYEG--NETL  193 (291)
T ss_dssp             HHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT---TCEEEEECCTHHHHC--CTTC
T ss_pred             HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCEEEEEechHhcCC--CCCC
Confidence            99999999999999998555567888899999999999999999999999999864   589999999998877  5888


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|+++++.|++++|||||+|+||+|+|++..... .++....+....|.+++++|+ |+|+.++||+++
T Consensus       194 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~p~-dvA~~v~~L~s~  271 (291)
T 3ijr_A          194 IDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSF-DEKKVSQFGSNVPMQRPGQPY-ELAPAYVYLASS  271 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHS-CHHHHHHTTTTSTTSSCBCGG-GTHHHHHHHHSG
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccC-CHHHHHHHHccCCCCCCcCHH-HHHHHHHHHhCC
Confidence            999999999999999999999999999999999999999875543 233445566788999999998 999999999999


Q ss_pred             CCCcccccEEEEcCCcccc
Q 024517          240 GSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~  258 (266)
                      ..+++||++|.+|||.++.
T Consensus       272 ~~~~itG~~i~vdGG~~~~  290 (291)
T 3ijr_A          272 DSSYVTGQMIHVNGGVIVN  290 (291)
T ss_dssp             GGTTCCSCEEEESSSCCCC
T ss_pred             ccCCCcCCEEEECCCcccC
Confidence            9999999999999998764

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=2.6e-47  Score=325.58  Aligned_cols=247  Identities=25%  Similarity=0.423  Sum_probs=209.5

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-c------------ccccHHHHHHHhcccCCCCCeEEEEEecCCC
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-N------------ERRLSSVAEKMMGSLKGGQPVEVVGLDMEED   68 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~------------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   68 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +            .+++++..+++.+.   +.++.++.+|++|.
T Consensus        43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~  119 (317)
T 3oec_A           43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ---GRRIIARQADVRDL  119 (317)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT---TCCEEEEECCTTCH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc---CCeEEEEECCCCCH
Confidence            47899999999999999999999999999999987 3            23344444454433   46899999999999


Q ss_pred             chHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           69 REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                      +  +++++++++.+.+|+||+||||||.. ...++.+.+.++|+.++++|+.+++.++++++|+|.+++.+|+||++||.
T Consensus       120 ~--~v~~~~~~~~~~~g~iD~lVnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~  196 (317)
T 3oec_A          120 A--SLQAVVDEALAEFGHIDILVSNVGIS-NQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSST  196 (317)
T ss_dssp             H--HHHHHHHHHHHHHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCG
T ss_pred             H--HHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcH
Confidence            9  99999999999999999999999984 55678889999999999999999999999999999876546899999999


Q ss_pred             cccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc------------ccHHHHHH--Hh
Q 024517          149 IGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV------------GQERAVKL--VR  214 (266)
Q Consensus       149 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~------------~~~~~~~~--~~  214 (266)
                      .+..+  .++...|+++|++++.|+++++.|++++||+||+|+||+|+|++.....            ..+.....  ..
T Consensus       197 ~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (317)
T 3oec_A          197 VGLRG--APGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQL  274 (317)
T ss_dssp             GGSSC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTT
T ss_pred             HhcCC--CCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhh
Confidence            98877  6889999999999999999999999999999999999999999754210            01111121  12


Q ss_pred             hccCCCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          215 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       215 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      ...| .++++|+ |+|++++||+|+.++++|||+|.+|||.+..
T Consensus       275 ~~~p-~~~~~pe-dvA~av~fL~s~~a~~itG~~i~vdGG~~~~  316 (317)
T 3oec_A          275 TLLP-IPWVEPE-DVSNAVAWLASDEARYIHGAAIPVDGGQLAR  316 (317)
T ss_dssp             CSSS-SSSBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             ccCC-CCCCCHH-HHHHHHHHHcCCcccCCCCCEEEECcchhhc
Confidence            2334 6777887 9999999999999999999999999998753

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=3.9e-47  Score=316.93  Aligned_cols=246  Identities=22%  Similarity=0.304  Sum_probs=210.0

Q ss_pred             CCCCcEEEEecCC-CchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDG-DEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~-~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++++|++|||||+ +|||+++|++|+++|++|++++ +.+++++..+++.+..  +.++.++.+|+++.+  ++++++++
T Consensus        19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~--~v~~~~~~   94 (266)
T 3o38_A           19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG--LGRVEAVVCDVTSTE--AVDALITQ   94 (266)
T ss_dssp             TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC--SSCEEEEECCTTCHH--HHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC--CCceEEEEeCCCCHH--HHHHHHHH
Confidence            4789999999997 5999999999999999999999 6677777777775542  258999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||. ....++.+.+.++|+..+++|+.+++.+++.++|+|.+++.+++||++||..+..+  .++.
T Consensus        95 ~~~~~g~id~li~~Ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~  171 (266)
T 3o38_A           95 TVEKAGRLDVLVNNAGL-GGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRA--QHSQ  171 (266)
T ss_dssp             HHHHHSCCCEEEECCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCC--CTTC
T ss_pred             HHHHhCCCcEEEECCCc-CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCC--CCCC
Confidence            99999999999999998 45577888999999999999999999999999999988744789999999998877  6889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|+++++.|++++||+||+|+||+|+|++...... .+....+....|.+++.+|+ |+|+.++||+++
T Consensus       172 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~r~~~~~-dva~~i~~l~s~  249 (266)
T 3o38_A          172 SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS-SELLDRLASDEAFGRAAEPW-EVAATIAFLASD  249 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------------------CCTTSSCCCHH-HHHHHHHHHHSG
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc-HHHHHHHHhcCCcCCCCCHH-HHHHHHHHHcCc
Confidence            9999999999999999999999999999999999999998766432 33445556778889999988 999999999999


Q ss_pred             CCCcccccEEEEcCCcc
Q 024517          240 GSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~  256 (266)
                      ..+++||++|.+|||.+
T Consensus       250 ~~~~~tG~~i~vdgG~~  266 (266)
T 3o38_A          250 YSSYMTGEVVSVSSQRA  266 (266)
T ss_dssp             GGTTCCSCEEEESSCCC
T ss_pred             cccCccCCEEEEcCCcC
Confidence            88999999999999974

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.8e-47  Score=320.94  Aligned_cols=244  Identities=23%  Similarity=0.308  Sum_probs=203.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-c------------ccccHHHHHHHhcccCCCCCeEEEEEecCCC
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-N------------ERRLSSVAEKMMGSLKGGQPVEVVGLDMEED   68 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~------------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   68 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +            .+++++..+.+...   +.++.++.+|++|+
T Consensus        10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~   86 (278)
T 3sx2_A           10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI---GSRIVARQADVRDR   86 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH---TCCEEEEECCTTCH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc---CCeEEEEeCCCCCH
Confidence            57899999999999999999999999999999998 4            33444444554433   46899999999999


Q ss_pred             chHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           69 REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                      +  +++++++++.+.+|++|++|||||.... .    .+.++|+.++++|+.++++++++++|+|.+++.+|+||++||.
T Consensus        87 ~--~v~~~~~~~~~~~g~id~lv~nAg~~~~-~----~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~  159 (278)
T 3sx2_A           87 E--SLSAALQAGLDELGRLDIVVANAGIAPM-S----AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSS  159 (278)
T ss_dssp             H--HHHHHHHHHHHHHCCCCEEEECCCCCCC-S----STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCG
T ss_pred             H--HHHHHHHHHHHHcCCCCEEEECCCCCCC-C----CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccH
Confidence            9  9999999999999999999999998422 2    2589999999999999999999999999876546899999999


Q ss_pred             cccccCC--CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHH---------HHhhcc
Q 024517          149 IGAERGL--YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK---------LVREAA  217 (266)
Q Consensus       149 ~~~~~~~--~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~---------~~~~~~  217 (266)
                      .+..+..  .++...|+++|++++.|+++++.|++++|||||+|+||+|+|++.......+....         ......
T Consensus       160 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (278)
T 3sx2_A          160 AGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAM  239 (278)
T ss_dssp             GGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSS
T ss_pred             HhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhc
Confidence            8876521  15678899999999999999999999999999999999999999865332221111         122334


Q ss_pred             CCCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccc
Q 024517          218 PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       218 ~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      | +++.+|+ |+|+.++||+++.++++||++|.+|||++.
T Consensus       240 p-~~~~~p~-dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  277 (278)
T 3sx2_A          240 P-VEVLAPE-DVANAVAWLVSDQARYITGVTLPVDAGFLN  277 (278)
T ss_dssp             S-CSSBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             C-cCcCCHH-HHHHHHHHHhCcccccccCCEEeECCCccc
Confidence            5 6777777 999999999999999999999999999865

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=4.8e-47  Score=315.38  Aligned_cols=248  Identities=23%  Similarity=0.344  Sum_probs=216.0

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++...   +.++.++.+|+++.+  +++++++++
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~--~~~~~~~~~   85 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE---GLSVTGTVCHVGKAE--DRERLVAMA   85 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHH--HHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEEccCCCHH--HHHHHHHHH
Confidence            46799999999999999999999999999999999 556666666666543   357889999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||||......++.+.+.++|+.++++|+.+++.++++++|+|++++ .++||++||..+..+  .++..
T Consensus        86 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~  162 (260)
T 2zat_A           86 VNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAYHP--FPNLG  162 (260)
T ss_dssp             HHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSC--CTTBH
T ss_pred             HHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhcCC--CCCch
Confidence            999999999999999844446777889999999999999999999999999998766 689999999988766  58889


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.|+++++.|++++|||+|+|+||+++|++.............+....|.+++++|+ |+|+.+.+|+++.
T Consensus       163 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~v~~l~s~~  241 (260)
T 2zat_A          163 PYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPE-DCAGIVSFLCSED  241 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGG-GGHHHHHHHTSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHH-HHHHHHHHHcCcc
Confidence            999999999999999999999999999999999999998754322232333344567888999998 9999999999988


Q ss_pred             CCcccccEEEEcCCcccc
Q 024517          241 SRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~~  258 (266)
                      .++++|+.+.+|||..++
T Consensus       242 ~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          242 ASYITGETVVVGGGTASR  259 (260)
T ss_dssp             GTTCCSCEEEESTTCCCC
T ss_pred             cCCccCCEEEECCCcccc
Confidence            899999999999997654

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=4e-47  Score=316.37  Aligned_cols=249  Identities=24%  Similarity=0.342  Sum_probs=215.0

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++....  +.++.++.+|+++.+  ++++++++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~--~~~~~~~~   78 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF--GVRVLEVAVDVATPE--GVDAVVES   78 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--CCCEEEEECCTTSHH--HHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc--CCceEEEEcCCCCHH--HHHHHHHH
Confidence            457899999999999999999999999999999999 6566666666665332  247899999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.++|+|++++ .++||++||..+..+  .++.
T Consensus        79 ~~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~  154 (263)
T 3ai3_A           79 VRSSFGGADILVNNAGTG-SNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQP--LWYE  154 (263)
T ss_dssp             HHHHHSSCSEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC--CTTC
T ss_pred             HHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCC--CCCc
Confidence            999999999999999984 456788889999999999999999999999999998766 699999999988776  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc---------cHHHHHHHhhc-cCCCCCCCChhhH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---------QERAVKLVREA-APLHRWLDVKNDL  229 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~~dv  229 (266)
                      ..|+++|++++.|+++++.|++++||++|+|+||+|.||+......         .+.....+... .|.+++.+|+ |+
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dv  233 (263)
T 3ai3_A          155 PIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPE-EL  233 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHH-HH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHH-HH
Confidence            9999999999999999999999999999999999999997654211         12222333344 7888999988 99


Q ss_pred             HHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          230 ASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       230 a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      |+.+++|+++..++++|+.+.+|||.+++
T Consensus       234 A~~~~~l~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          234 ANFFVFLCSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             HHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHcCccccCCCCcEEEECCCcccc
Confidence            99999999988899999999999998754

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=2.1e-47  Score=319.36  Aligned_cols=245  Identities=24%  Similarity=0.332  Sum_probs=210.4

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccc-cHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERR-LSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |++++|++|||||++|||+++|++|+++|++|+++++ .+. .+++.+.+.+.   +.++.++.+|+++.+  +++++++
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~v~~~~~   99 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK---GYKAAVIKFDAASES--DFIEAIQ   99 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTCHH--HHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCceEEEECCCCCHH--HHHHHHH
Confidence            7789999999999999999999999999999999984 433 34444555433   468999999999999  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.++|+|.+++ .|+||++||..+..+  .++
T Consensus       100 ~~~~~~g~id~li~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~  175 (271)
T 4iin_A          100 TIVQSDGGLSYLVNNAGVV-RDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIGERG--NMG  175 (271)
T ss_dssp             HHHHHHSSCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHC--CTT
T ss_pred             HHHHhcCCCCEEEECCCcC-CCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhhcCC--CCC
Confidence            9999999999999999984 556777889999999999999999999999999998876 699999999998877  688


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ...|+++|++++.|+++++.|++++||+||+|+||+|+|++.....  +.....+....|.+++.+|+ |+|+.+.+|++
T Consensus       176 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~~~~p~-dvA~~i~~l~s  252 (271)
T 4iin_A          176 QTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLK--DELKADYVKNIPLNRLGSAK-EVAEAVAFLLS  252 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--------------CGGGCTTCSCBCHH-HHHHHHHHHHS
T ss_pred             chHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhc--HHHHHHHHhcCCcCCCcCHH-HHHHHHHHHhC
Confidence            9999999999999999999999999999999999999999876642  33445556778899999887 99999999999


Q ss_pred             CCCCcccccEEEEcCCccc
Q 024517          239 DGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~~  257 (266)
                      +..++++|+.+.+|||.++
T Consensus       253 ~~~~~itG~~i~vdGG~~~  271 (271)
T 4iin_A          253 DHSSYITGETLKVNGGLYM  271 (271)
T ss_dssp             GGGTTCCSCEEEESTTSCC
T ss_pred             CCcCCCcCCEEEeCCCeeC
Confidence            9889999999999999763

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=3.8e-47  Score=315.65  Aligned_cols=244  Identities=25%  Similarity=0.387  Sum_probs=211.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccc--cHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERR--LSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +|++|||||++|||+++|++|+++|++|++++ +.++  +++..+++...   +.++.++.+|+++.+  +++++++++.
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~--~v~~~~~~~~   76 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA---DQKAVFVGLDVTDKA--NFDSAIDEAA   76 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT---TCCEEEEECCTTCHH--HHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc---CCcEEEEEccCCCHH--HHHHHHHHHH
Confidence            78999999999999999999999999999999 5555  56666666543   357899999999998  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.++++|++|||||.. ...++.+.+.++|+.++++|+.+++.+++.++|+|.+++.+|+||++||..+..+  .++...
T Consensus        77 ~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~  153 (258)
T 3a28_C           77 EKLGGFDVLVNNAGIA-QIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQG--FPILSA  153 (258)
T ss_dssp             HHHTCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSC--CTTCHH
T ss_pred             HHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccC--CCCchh
Confidence            9999999999999984 4567788899999999999999999999999999987662389999999988776  588899


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc-------cc--HHHHHHHhhccCCCCCCCChhhHHHH
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV-------GQ--ERAVKLVREAAPLHRWLDVKNDLAST  232 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~~dva~~  232 (266)
                      |+++|++++.|+++++.|++++|||||+|+||+|+|++.....       ..  +.....+....|.+++++|+ |+|+.
T Consensus       154 Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dvA~~  232 (258)
T 3a28_C          154 YSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPE-DVAGL  232 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHH-HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHH-HHHHH
Confidence            9999999999999999999999999999999999999865421       01  22333444567888999988 99999


Q ss_pred             HHHHccCCCCcccccEEEEcCCccc
Q 024517          233 VIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       233 ~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      ++||+++..++++|+.+.+|||.++
T Consensus       233 v~~l~s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          233 VSFLASENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSSSCC
T ss_pred             HHHHhCcccCCCCCCEEEECCCEec
Confidence            9999999889999999999999764

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4.9e-47  Score=312.67  Aligned_cols=240  Identities=28%  Similarity=0.409  Sum_probs=209.6

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||++++++|+++|++|++++ +.+++++..+++        .+.++.+|++|.+  ++++++++
T Consensus         1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~D~~~~~--~~~~~~~~   70 (245)
T 1uls_A            1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV--------GAHPVVMDVADPA--SVERGFAE   70 (245)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--------TCEEEECCTTCHH--HHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--------CCEEEEecCCCHH--HHHHHHHH
Confidence            889999999999999999999999999999999999 444444433221        2778999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.+|++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|+|++++ .|+||++||.. ..+  .++.
T Consensus        71 ~~~~~g~id~lvn~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~-~~~--~~~~  145 (245)
T 1uls_A           71 ALAHLGRLDGVVHYAGIT-RDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRV-YLG--NLGQ  145 (245)
T ss_dssp             HHHHHSSCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGG-GGC--CTTC
T ss_pred             HHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEccch-hcC--CCCc
Confidence            999999999999999984 556778889999999999999999999999999998765 69999999988 655  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|+++++.|++++|||+|+|+||+++|++....  .+..........|.+++.+|+ |+|+.+++|+++
T Consensus       146 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~~~-dvA~~v~~l~s~  222 (245)
T 1uls_A          146 ANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV--PEKVREKAIAATPLGRAGKPL-EVAYAALFLLSD  222 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS--CHHHHHHHHHTCTTCSCBCHH-HHHHHHHHHHSG
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc--CHHHHHHHHhhCCCCCCcCHH-HHHHHHHHHhCc
Confidence            99999999999999999999999999999999999999987643  233334445667888888887 999999999998


Q ss_pred             CCCcccccEEEEcCCcccc
Q 024517          240 GSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~  258 (266)
                      ..++++|+.+.+|||.++.
T Consensus       223 ~~~~~tG~~~~vdgG~~~~  241 (245)
T 1uls_A          223 ESSFITGQVLFVDGGRTIG  241 (245)
T ss_dssp             GGTTCCSCEEEESTTTTTT
T ss_pred             hhcCCcCCEEEECCCcccC
Confidence            8899999999999998654

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=6.3e-47  Score=315.77  Aligned_cols=247  Identities=20%  Similarity=0.278  Sum_probs=218.7

Q ss_pred             CCCCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEEe-ccccc-HHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHH
Q 024517            1 MENQAKRVLLTSDG--DEISKNIAFHLAKRGCRLVLVG-NERRL-SSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEA   76 (266)
Q Consensus         1 m~l~~k~vlItGa~--~giG~~ia~~l~~~g~~v~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~   76 (266)
                      |++++|++|||||+  +|||+++|++|+++|++|++++ +.+.. ++..+++.+..  +.++.++.+|+++.+  +++++
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~--~v~~~   91 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY--GIKAKAYKCQVDSYE--SCEKL   91 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH--CCCEECCBCCTTCHH--HHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc--CCceeEEecCCCCHH--HHHHH
Confidence            46789999999999  9999999999999999999998 54444 56666665443  368999999999999  99999


Q ss_pred             HHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC
Q 024517           77 VDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY  156 (266)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  156 (266)
                      ++++.+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.++|+|++++ .|+||++||..+..+...
T Consensus        92 ~~~~~~~~g~id~li~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~  169 (267)
T 3gdg_A           92 VKDVVADFGQIDAFIANAGAT-ADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHIANFP  169 (267)
T ss_dssp             HHHHHHHTSCCSEEEECCCCC-CCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCSS
T ss_pred             HHHHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEccccccccCCC
Confidence            999999999999999999984 556788899999999999999999999999999998876 699999999988766322


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      ++...|+++|++++.|+++++.|+++. |+||+|+||+|+|++....  .+.....+....|.+++++|+ |+|+.++||
T Consensus       170 ~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~r~~~~~-dva~~~~~l  245 (267)
T 3gdg_A          170 QEQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFV--PKETQQLWHSMIPMGRDGLAK-ELKGAYVYF  245 (267)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGS--CHHHHHHHHTTSTTSSCEETH-HHHHHHHHH
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhC--CHHHHHHHHhcCCCCCCcCHH-HHHhHhhee
Confidence            578999999999999999999999887 9999999999999998654  345556677889999999998 999999999


Q ss_pred             ccCCCCcccccEEEEcCCccc
Q 024517          237 ISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +++.++++||+.|.+|||.++
T Consensus       246 ~s~~~~~itG~~i~vdgG~~~  266 (267)
T 3gdg_A          246 ASDASTYTTGADLLIDGGYTT  266 (267)
T ss_dssp             HSTTCTTCCSCEEEESTTGGG
T ss_pred             ecCccccccCCEEEECCceec
Confidence            999999999999999999875

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-47  Score=317.95  Aligned_cols=252  Identities=20%  Similarity=0.227  Sum_probs=217.7

Q ss_pred             CCCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDG--DEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      .+++|++|||||+  +|||+++|++|+++|++|+++++.++..+..+++.+..   .++.++.+|+++.+  ++++++++
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~--~v~~~~~~   85 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF---GSELVFPCDVADDA--QIDALFAS   85 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT---TCCCEEECCTTCHH--HHHHHHHH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHc---CCcEEEECCCCCHH--HHHHHHHH
Confidence            4689999999999  99999999999999999999996566666666665443   35889999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCC---CCCCC-CCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC
Q 024517           80 ACQILGNLDAFVHCYTYEGKM---QDPLQ-VGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL  155 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~---~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~  155 (266)
                      +.+.+++||++|||||+....   .++.+ .+.++|+.++++|+.+++.+++.++|+|++   .|+||++||..+..+  
T Consensus        86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~--  160 (271)
T 3ek2_A           86 LKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD---DASLLTLSYLGAERA--  160 (271)
T ss_dssp             HHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE---EEEEEEEECGGGTSB--
T ss_pred             HHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc---CceEEEEeccccccC--
Confidence            999999999999999985431   45555 899999999999999999999999999875   589999999998877  


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      .++...|+++|+|++.|+++++.|++++|||||+|+||+|+|++.......+.....+....|.+++.+|+ |+|+.++|
T Consensus       161 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-dva~~i~~  239 (271)
T 3ek2_A          161 IPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIE-QVGNAGAF  239 (271)
T ss_dssp             CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHH-HHHHHHHH
T ss_pred             CCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHH-HHHHHHHH
Confidence            68899999999999999999999999999999999999999999877554456667777889999999998 99999999


Q ss_pred             HccCCCCcccccEEEEcCCccccCCCccC
Q 024517          236 LISDGSRYMTGTTIYVDGAQSITRPRMRS  264 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~~~~~~~  264 (266)
                      |+++.++++||+.|.+|||.++..+++.+
T Consensus       240 l~s~~~~~~tG~~i~vdgG~~~~~~~~~~  268 (271)
T 3ek2_A          240 LLSDLASGVTAEVMHVDSGFNAVVGGMAG  268 (271)
T ss_dssp             HHSGGGTTCCSEEEEESTTGGGBCCCC--
T ss_pred             HcCcccCCeeeeEEEECCCeeeehhhhhh
Confidence            99998899999999999999999887764

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=4e-47  Score=317.28  Aligned_cols=241  Identities=22%  Similarity=0.295  Sum_probs=211.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.+..             ...+..+.+|+++.+  +++++++++
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~~~Dv~~~~--~v~~~~~~~   75 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD-------------VNVSDHFKIDVTNEE--EVKEAVEKT   75 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C-------------TTSSEEEECCTTCHH--HHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc-------------cCceeEEEecCCCHH--HHHHHHHHH
Confidence            46899999999999999999999999999999999 43322             135678899999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.+|++|++|||||. ....++.+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++||..+..+  .++..
T Consensus        76 ~~~~g~iD~lv~nAg~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~  151 (269)
T 3vtz_A           76 TKKYGRIDILVNNAGI-EQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSYAA--TKNAA  151 (269)
T ss_dssp             HHHHSCCCEEEECCCC-CCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSB--CTTCH
T ss_pred             HHHcCCCCEEEECCCc-CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccC--CCCCh
Confidence            9999999999999998 4557788899999999999999999999999999998876 799999999998877  68899


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc---------cHHHHHHHhhccCCCCCCCChhhHHH
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---------QERAVKLVREAAPLHRWLDVKNDLAS  231 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~  231 (266)
                      .|+++|++++.|+++++.|+++ +|+||+|+||+|+|++......         .++....+....|++++++|+ |+|+
T Consensus       152 ~Y~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~  229 (269)
T 3vtz_A          152 AYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPE-EVAE  229 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHH-HHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHH-HHHH
Confidence            9999999999999999999998 8999999999999998654321         033445556778999999998 9999


Q ss_pred             HHHHHccCCCCcccccEEEEcCCccccCCCcc
Q 024517          232 TVIYLISDGSRYMTGTTIYVDGAQSITRPRMR  263 (266)
Q Consensus       232 ~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~  263 (266)
                      .++||+++.++++||+.|.+|||.+...|...
T Consensus       230 ~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~  261 (269)
T 3vtz_A          230 VVAFLASDRSSFITGACLTVDGGLLSKLPIST  261 (269)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGBCCCCC
T ss_pred             HHHHHhCCccCCCcCcEEEECCCccccCCCCC
Confidence            99999999999999999999999998776543

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=6.2e-47  Score=313.33  Aligned_cols=238  Identities=21%  Similarity=0.287  Sum_probs=206.8

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEec--CCCchHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFDEAVD   78 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~~~~~v~~~~~   78 (266)
                      .+++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++.+..  +.++.++.+|+  ++.+  +++++++
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~--~~~~~~~   84 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET--GRQPQWFILDLLTCTSE--NCQQLAQ   84 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SCCCEEEECCTTTCCHH--HHHHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc--CCCceEEEEecccCCHH--HHHHHHH
Confidence            36899999999999999999999999999999999 6677777777776542  24788999999  7777  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++.+.++++|++|||||......++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..+  .++
T Consensus        85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~--~~~  161 (252)
T 3f1l_A           85 RIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQG--RAN  161 (252)
T ss_dssp             HHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGTSC--CTT
T ss_pred             HHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhccC--CCC
Confidence            99999999999999999855567888999999999999999999999999999998876 799999999998877  688


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ...|+++|++++.|+++++.|+++. ||||+|+||+|+|++.....          ...+..++.+|+ |+|+.++||++
T Consensus       162 ~~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~----------~~~~~~~~~~p~-dva~~~~~L~s  229 (252)
T 3f1l_A          162 WGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAF----------PTEDPQKLKTPA-DIMPLYLWLMG  229 (252)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHC----------TTCCGGGSBCTG-GGHHHHHHHHS
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhC----------CccchhccCCHH-HHHHHHHHHcC
Confidence            9999999999999999999999987 99999999999998754321          112234567787 99999999999


Q ss_pred             CCCCcccccEEEEcCCcccc
Q 024517          239 DGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~~~  258 (266)
                      +.++++||+.|.+|||....
T Consensus       230 ~~~~~itG~~i~vdgG~~~~  249 (252)
T 3f1l_A          230 DDSRRKTGMTFDAQPGRKPG  249 (252)
T ss_dssp             GGGTTCCSCEEESSCC----
T ss_pred             ccccCCCCCEEEeCCCcCCC
Confidence            99999999999999998654

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.3e-47  Score=318.25  Aligned_cols=244  Identities=20%  Similarity=0.284  Sum_probs=212.0

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++...    .++.++.+|++|.+  ++++++++
T Consensus        25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~Dv~d~~--~v~~~~~~   98 (276)
T 2b4q_A           25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY----GDCQAIPADLSSEA--GARRLAQA   98 (276)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS----SCEEECCCCTTSHH--HHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CceEEEEeeCCCHH--HHHHHHHH
Confidence            678899999999999999999999999999999999 556666666666432    27889999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCC----CeEEEEecccccccCC
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAG----GSIVFLTSIIGAERGL  155 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~----g~iv~iss~~~~~~~~  155 (266)
                      +.+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.++|+|++++ .    ++||++||..+..+  
T Consensus        99 ~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~~~~~g~iV~isS~~~~~~--  174 (276)
T 2b4q_A           99 LGELSARLDILVNNAGTS-WGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSA-SAENPARVINIGSVAGISA--  174 (276)
T ss_dssp             HHHHCSCCSEEEECCCCC-CCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-CSSSCEEEEEECCGGGTCC--
T ss_pred             HHHhcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcc-CCCCCCEEEEECCHHHcCC--
Confidence            999999999999999984 446778889999999999999999999999999998765 3    89999999988766  


Q ss_pred             CCCch-hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhh--ccCCCCCCCChhhHHHH
Q 024517          156 YPGAA-AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE--AAPLHRWLDVKNDLAST  232 (266)
Q Consensus       156 ~~~~~-~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dva~~  232 (266)
                      .+... .|+++|++++.|+++++.|++++|||||+|+||+++|++.......  ....+..  ..|.+++++|+ |+|+.
T Consensus       175 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~p~~r~~~p~-dvA~~  251 (276)
T 2b4q_A          175 MGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND--PQALEADSASIPMGRWGRPE-EMAAL  251 (276)
T ss_dssp             CCCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC--HHHHHHHHHTSTTSSCCCHH-HHHHH
T ss_pred             CCCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh--HHHHHHhhcCCCCCCcCCHH-HHHHH
Confidence            46667 9999999999999999999999999999999999999987543211  2223334  67888999988 99999


Q ss_pred             HHHHccCCCCcccccEEEEcCCccc
Q 024517          233 VIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       233 ~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +++|+++..++++|+.+.+|||.++
T Consensus       252 v~~l~s~~~~~~tG~~i~vdGG~~L  276 (276)
T 2b4q_A          252 AISLAGTAGAYMTGNVIPIDGGFHL  276 (276)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHhCccccCCCCCEEEeCCCccC
Confidence            9999998889999999999999754

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=5.3e-47  Score=314.32  Aligned_cols=244  Identities=19%  Similarity=0.238  Sum_probs=216.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-c-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-N-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ..++|++|||||++|||+++|++|+++|++|++++ + .++.++..+++.+.   +.++.++.+|+++.+  ++++++++
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~--~v~~~~~~   84 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL---GFDFYASEGNVGDWD--STKQAFDK   84 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT---TCCCEEEECCTTCHH--HHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCeeEEEecCCCCHH--HHHHHHHH
Confidence            35799999999999999999999999999999887 3 45556666666543   468899999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|+|.+++ .|+||++||..+..+  .++.
T Consensus        85 ~~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~  160 (256)
T 3ezl_A           85 VKAEVGEIDVLVNNAGIT-RDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKG--QFGQ  160 (256)
T ss_dssp             HHHHTCCEEEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGGS--CSCC
T ss_pred             HHHhcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhccC--CCCC
Confidence            999999999999999984 556788899999999999999999999999999998876 699999999998877  6889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|+|++.|+++++.|++++||++|+|+||+++|++....  .+.....+....|.+++.+|+ |+|+.++||+++
T Consensus       161 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~s~  237 (256)
T 3ezl_A          161 TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI--RPDVLEKIVATIPVRRLGSPD-EIGSIVAWLASE  237 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHHHSTTSSCBCHH-HHHHHHHHHHSG
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc--CHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCC
Confidence            99999999999999999999999999999999999999987654  344556666778999999988 999999999999


Q ss_pred             CCCcccccEEEEcCCccc
Q 024517          240 GSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~  257 (266)
                      ..++++|+.+.+|||.++
T Consensus       238 ~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          238 ESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             GGTTCCSCEEEESTTSCC
T ss_pred             cccCCcCcEEEECCCEeC
Confidence            889999999999999875

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=7.2e-47  Score=311.85  Aligned_cols=243  Identities=27%  Similarity=0.407  Sum_probs=212.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-c-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-E-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++++|++|||||++|||+++|++|+++|++|+++++ . +++++..+++...   +.++.++.+|++|++  ++++++++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~   75 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL---GSDAIAVRADVANAE--DVTNMVKQ   75 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTCHH--HHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCcEEEEEcCCCCHH--HHHHHHHH
Confidence            367999999999999999999999999999999874 3 4455666666543   357899999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||.. ...++.+.+.++|+.++++|+.+++.+++.++|+|++++ .|+||++||..+..+  .++.
T Consensus        76 ~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~  151 (246)
T 2uvd_A           76 TVDVFGQVDILVNNAGVT-KDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGVTG--NPGQ  151 (246)
T ss_dssp             HHHHHSCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHC--CTTB
T ss_pred             HHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhcCC--CCCC
Confidence            999999999999999984 456777889999999999999999999999999998766 699999999988776  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|+++++.|++++||++|+|+||+++|++.....  +.....+....|.+++.+|+ |+|+.+++|+++
T Consensus       152 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~p~~~~~~~~-dvA~~~~~l~s~  228 (246)
T 2uvd_A          152 ANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD--ENIKAEMLKLIPAAQFGEAQ-DIANAVTFFASD  228 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC--TTHHHHHHHTCTTCSCBCHH-HHHHHHHHHHSG
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC--HHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCc
Confidence            999999999999999999999999999999999999999876532  22333444567888888887 999999999998


Q ss_pred             CCCcccccEEEEcCCcc
Q 024517          240 GSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~  256 (266)
                      ..++++|+.+.+|||.+
T Consensus       229 ~~~~~tG~~~~vdgG~~  245 (246)
T 2uvd_A          229 QSKYITGQTLNVDGGMV  245 (246)
T ss_dssp             GGTTCCSCEEEESTTSC
T ss_pred             hhcCCCCCEEEECcCcc
Confidence            88999999999999975

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=1.3e-46  Score=310.79  Aligned_cols=241  Identities=22%  Similarity=0.233  Sum_probs=200.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +. +++++   .+.+.   +.++.++.+|+++.+  ++++++++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~---~~~~~~~~~Dv~~~~--~v~~~~~~   75 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL---GRRVLTVKCDVSQPG--DVEAFGKQ   75 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT---TCCEEEEECCTTCHH--HHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc---CCcEEEEEeecCCHH--HHHHHHHH
Confidence            47899999999999999999999999999999999 44 33333   33322   357899999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||.. ...++.+.+.++|+.++++|+.+++.++++++|+|++++ .|+||++||..+..+  .++.
T Consensus        76 ~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~  151 (249)
T 2ew8_A           76 VISTFGRCDILVNNAGIY-PLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLK--IEAY  151 (249)
T ss_dssp             HHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSC--CSSC
T ss_pred             HHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccC--CCCc
Confidence            999999999999999984 456778889999999999999999999999999998776 699999999988776  5888


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcc-ccccc-HHHHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYP-IAVGQ-ERAVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      ..|+++|++++.|+++++.|++++|||||+|+||+|+|++.. ..... ++....+.  .|.+++.+|+ |+|+.+++|+
T Consensus       152 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~-dva~~~~~l~  228 (249)
T 2ew8_A          152 THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNML--QAIPRLQVPL-DLTGAAAFLA  228 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTT--SSSCSCCCTH-HHHHHHHHHT
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhh--CccCCCCCHH-HHHHHHHHHc
Confidence            999999999999999999999999999999999999999875 32111 11111111  6788889998 9999999999


Q ss_pred             cCCCCcccccEEEEcCCccc
Q 024517          238 SDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       238 s~~~~~~~G~~i~~dgG~~~  257 (266)
                      ++..++++|+.+.+|||.++
T Consensus       229 s~~~~~~tG~~~~vdGG~~~  248 (249)
T 2ew8_A          229 SDDASFITGQTLAVDGGMVR  248 (249)
T ss_dssp             SGGGTTCCSCEEEESSSCCC
T ss_pred             CcccCCCCCcEEEECCCccC
Confidence            98889999999999999764

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.6e-47  Score=315.70  Aligned_cols=245  Identities=25%  Similarity=0.382  Sum_probs=181.4

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++.+.   +.++.++.+|++|++  ++++++++
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~   79 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD---GGTAISVAVDVSDPE--SAKAMADR   79 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCEEEEEECCTTSHH--HHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc---CCcEEEEEccCCCHH--HHHHHHHH
Confidence            788999999999999999999999999999999999 777777777777654   468899999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCC--CCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCC
Q 024517           80 ACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP  157 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  157 (266)
                      +.+.++++|++|||||...  ...++.+.+.++|+..+++|+.+++.+++.++|+|.+++ .++||++||..+.     +
T Consensus        80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-----~  153 (253)
T 3qiv_A           80 TLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAW-----L  153 (253)
T ss_dssp             HHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC----------
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccc-----C
Confidence            9999999999999999742  334667889999999999999999999999999998877 7999999998764     4


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      ....|+++|++++.|+++++.|++++||++|+|+||+|+|++..... .++.........|.+++++|+ |+|+.+++|+
T Consensus       154 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~  231 (253)
T 3qiv_A          154 YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTT-PKEMVDDIVKGLPLSRMGTPD-DLVGMCLFLL  231 (253)
T ss_dssp             ------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------------------------------CC-HHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcC-cHHHHHHHhccCCCCCCCCHH-HHHHHHHHHc
Confidence            56789999999999999999999999999999999999999876543 233445556677888999998 9999999999


Q ss_pred             cCCCCcccccEEEEcCCcccc
Q 024517          238 SDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       238 s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      ++..++++|+.|.+|||..++
T Consensus       232 s~~~~~~tG~~~~vdgG~~~~  252 (253)
T 3qiv_A          232 SDEASWITGQIFNVDGGQIIR  252 (253)
T ss_dssp             SGGGTTCCSCEEEC-------
T ss_pred             CccccCCCCCEEEECCCeecC
Confidence            998899999999999998765

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=6.7e-47  Score=316.05  Aligned_cols=245  Identities=17%  Similarity=0.272  Sum_probs=211.5

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++|++|||||++|||+++|++|+++|++|++++ +. +..++..+++...   +.++.++.+|++|.+  +++++++++
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~v~~~~~~~   97 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA---GRDFKAYAVDVADFE--SCERCAEKV   97 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT---TCCCEEEECCTTCHH--HHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc---CCceEEEEecCCCHH--HHHHHHHHH
Confidence            5789999999999999999999999999999988 43 3334444444332   468999999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||||.. ...++.+.+.++|+.++++|+.+++.+++.++|+|.+++ .|+||++||..+..+  .++..
T Consensus        98 ~~~~g~id~li~nAg~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~  173 (269)
T 3gk3_A           98 LADFGKVDVLINNAGIT-RDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGSRG--AFGQA  173 (269)
T ss_dssp             HHHHSCCSEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHC--CTTBH
T ss_pred             HHHcCCCCEEEECCCcC-CCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhhccC--CCCcc
Confidence            99999999999999984 556788899999999999999999999999999998876 699999999998877  68899


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|+|++.|+++++.|++++||+||+|+||+|+|++...... ...........|.+++.+|+ |+|+.+++|+++.
T Consensus       174 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~p~-dvA~~v~~L~s~~  251 (269)
T 3gk3_A          174 NYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQ-DVLEAKILPQIPVGRLGRPD-EVAALIAFLCSDD  251 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--------CCSGGGCTTSSCBCHH-HHHHHHHHHTSTT
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhch-hHHHHHhhhcCCcCCccCHH-HHHHHHHHHhCCC
Confidence            999999999999999999999999999999999999999876432 22222455678889988887 9999999999999


Q ss_pred             CCcccccEEEEcCCcccc
Q 024517          241 SRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~~  258 (266)
                      ..++|||.|.+|||.+++
T Consensus       252 ~~~itG~~i~vdgG~~~s  269 (269)
T 3gk3_A          252 AGFVTGADLAINGGMHMS  269 (269)
T ss_dssp             CTTCCSCEEEESTTSCCC
T ss_pred             cCCeeCcEEEECCCEeCc
Confidence            999999999999998763

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=9.6e-47  Score=313.57  Aligned_cols=246  Identities=23%  Similarity=0.308  Sum_probs=206.8

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccc-cHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERR-LSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++|++|||||++|||+++|++|+++|++|++++ +.++ ++++.+++....  +.++.++.+|++|.+  +++++++++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~--~v~~~~~~~   77 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH--GVKVLYDGADLSKGE--AVRGLVDNA   77 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH--TSCEEEECCCTTSHH--HHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhcc--CCcEEEEECCCCCHH--HHHHHHHHH
Confidence            6799999999999999999999999999999999 5555 666666664321  247889999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||||.. ...++.+.+.++|+.++++|+.+++.+++.++|+|++++ .|+||++||..+..+  .++..
T Consensus        78 ~~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~  153 (260)
T 1x1t_A           78 VRQMGRIDILVNNAGIQ-HTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVA--SANKS  153 (260)
T ss_dssp             HHHHSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC--CTTCH
T ss_pred             HHhcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhCcC--CCCCc
Confidence            99999999999999984 456777889999999999999999999999999998766 699999999988776  57889


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc---------HHHHHHH-hhccCCCCCCCChhhHH
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ---------ERAVKLV-REAAPLHRWLDVKNDLA  230 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~~~~dva  230 (266)
                      .|+++|++++.|+++++.|++++||+||+|+||+|+|++.......         ++....+ ....|.+++++|+ |+|
T Consensus       154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~-dva  232 (260)
T 1x1t_A          154 AYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPE-QLG  232 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHH-HHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHH-HHH
Confidence            9999999999999999999999999999999999999987543210         1122222 4456888989988 999


Q ss_pred             HHHHHHccCCCCcccccEEEEcCCccc
Q 024517          231 STVIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +.+++|+++..++++|+.+.+|||.++
T Consensus       233 ~~~~~l~s~~~~~~tG~~~~vdgG~~~  259 (260)
T 1x1t_A          233 GTAVFLASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhChhhcCCCCCEEEECCCccC
Confidence            999999998889999999999999764

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=1.3e-46  Score=312.59  Aligned_cols=236  Identities=19%  Similarity=0.234  Sum_probs=193.6

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.++..+   .+.+.     .+.++.+|+++.+  ++++++++
T Consensus        23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~---~~~~~-----~~~~~~~Dv~~~~--~v~~~~~~   92 (260)
T 3gem_A           23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVT---ELRQA-----GAVALYGDFSCET--GIMAFIDL   92 (260)
T ss_dssp             ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHH---HHHHH-----TCEEEECCTTSHH--HHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH---HHHhc-----CCeEEECCCCCHH--HHHHHHHH
Confidence            778999999999999999999999999999999999 5444333   33222     4788999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||.... .+ .+.+.++|+.++++|+.++++++++++|+|.+++ .|+||++||..+..+  .++.
T Consensus        93 ~~~~~g~iD~lv~nAg~~~~-~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~--~~~~  167 (260)
T 3gem_A           93 LKTQTSSLRAVVHNASEWLA-ET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-VADIVHISDDVTRKG--SSKH  167 (260)
T ss_dssp             HHHHCSCCSEEEECCCCCCC-CC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGTC--CSSC
T ss_pred             HHHhcCCCCEEEECCCccCC-CC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCC--CCCc
Confidence            99999999999999997433 33 5677899999999999999999999999998876 699999999998877  6889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|+++++.|+++ +||||+|+||+++|++..    ............|.+++++|+ |+|+.++||++ 
T Consensus       168 ~~Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~----~~~~~~~~~~~~p~~r~~~~e-dva~~v~~L~~-  240 (260)
T 3gem_A          168 IAYCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKD----DAAYRANALAKSALGIEPGAE-VIYQSLRYLLD-  240 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC-------------------CCSCCCCCTH-HHHHHHHHHHH-
T ss_pred             HhHHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCC----CHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHhh-
Confidence            99999999999999999999998 699999999999998753    233344556678999999998 99999999994 


Q ss_pred             CCCcccccEEEEcCCccccC
Q 024517          240 GSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~~  259 (266)
                       ++++||+.|.+|||.++..
T Consensus       241 -~~~itG~~i~vdGG~~~~~  259 (260)
T 3gem_A          241 -STYVTGTTLTVNGGRHVKG  259 (260)
T ss_dssp             -CSSCCSCEEEESTTTTTC-
T ss_pred             -CCCCCCCEEEECCCcccCC
Confidence             5899999999999998753

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=9.5e-47  Score=312.91  Aligned_cols=244  Identities=25%  Similarity=0.329  Sum_probs=211.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +|++|||||++|||++++++|+++|++|++++ +.++++++.+++...   +.++.++.+|++|.+  +++++++++.+.
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~v~~~~~~~~~~   76 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA---GGHAVAVKVDVSDRD--QVFAAVEQARKT   76 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTSHH--HHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEecCCCHH--HHHHHHHHHHHH
Confidence            68999999999999999999999999999999 666666666666543   357899999999998  999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhH
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG  163 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~  163 (266)
                      ++++|++|||||.. ...++.+.+.++|+.++++|+.+++.+++.++|+|.+++..++||++||..+..+  .++...|+
T Consensus        77 ~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~  153 (256)
T 1geg_A           77 LGGFDVIVNNAGVA-PSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG--NPELAVYS  153 (256)
T ss_dssp             TTCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC--CTTBHHHH
T ss_pred             hCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC--CCCchhHH
Confidence            99999999999983 4567788899999999999999999999999999987542489999999988776  57889999


Q ss_pred             HhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc---------cHHHHHHHhhccCCCCCCCChhhHHHHHH
Q 024517          164 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---------QERAVKLVREAAPLHRWLDVKNDLASTVI  234 (266)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (266)
                      ++|++++.|+++++.|++++||+||+|+||+|+|++......         .+.....+....|.+++++|+ |+|+.++
T Consensus       154 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dvA~~v~  232 (256)
T 1geg_A          154 SSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPE-DVAACVS  232 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHH-HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHH-HHHHHHH
Confidence            999999999999999999999999999999999998654210         122233344567888989888 9999999


Q ss_pred             HHccCCCCcccccEEEEcCCccc
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +|+++..++++|+.+.+|||.++
T Consensus       233 ~l~s~~~~~~tG~~i~vdGG~~~  255 (256)
T 1geg_A          233 YLASPDSDYMTGQSLLIDGGMVF  255 (256)
T ss_dssp             HHHSGGGTTCCSCEEEESSSSSC
T ss_pred             HHhCccccCCCCCEEEeCCCccC
Confidence            99998889999999999999764

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=1.7e-47  Score=319.04  Aligned_cols=237  Identities=22%  Similarity=0.304  Sum_probs=207.7

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|+++++ .+..+              ....+.+|+++.+  ++++++++
T Consensus        24 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~--------------~~~~~~~Dv~~~~--~~~~~~~~   87 (266)
T 3uxy_A           24 QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA--------------ADLHLPGDLREAA--YADGLPGA   87 (266)
T ss_dssp             --CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC--------------CSEECCCCTTSHH--HHHHHHHH
T ss_pred             hCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--------------hhhccCcCCCCHH--HHHHHHHH
Confidence            4578999999999999999999999999999999984 33221              2244578999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.++++++|+|++++ .|+||++||..+..+  .++.
T Consensus        88 ~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~--~~~~  163 (266)
T 3uxy_A           88 VAAGLGRLDIVVNNAGVI-SRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLRP--GPGH  163 (266)
T ss_dssp             HHHHHSCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTBC--CTTB
T ss_pred             HHHhcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCC--CCCC
Confidence            999999999999999984 557788899999999999999999999999999998876 799999999998877  6889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-----cHHHHHHHhhccCCCCCCCChhhHHHHHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-----QERAVKLVREAAPLHRWLDVKNDLASTVI  234 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (266)
                      ..|+++|++++.|+++++.|++++||+||+|+||+|+|++......     .++....+....|.+++++|+ |+|+.++
T Consensus       164 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~  242 (266)
T 3uxy_A          164 ALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPE-DIADVVL  242 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHH-HHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHH-HHHHHHH
Confidence            9999999999999999999999999999999999999998654321     223345566788999999998 9999999


Q ss_pred             HHccCCCCcccccEEEEcCCcccc
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      ||+++.++++||+.|.+|||.+++
T Consensus       243 ~L~s~~~~~itG~~i~vdGG~~~s  266 (266)
T 3uxy_A          243 FLASDAARYLCGSLVEVNGGKAVA  266 (266)
T ss_dssp             HHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHhCchhcCCcCCEEEECcCEeCC
Confidence            999999999999999999998763

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=2.6e-46  Score=314.23  Aligned_cols=247  Identities=22%  Similarity=0.283  Sum_probs=218.5

Q ss_pred             CCCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDG--DEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++++|++|||||+  +|||+++|++|+++|++|+++++.+ .++..+++.+..   .++.++.+|+++.+  ++++++++
T Consensus        23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~---~~~~~~~~Dl~~~~--~v~~~~~~   96 (280)
T 3nrc_A           23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKDRVEKLCAEF---NPAAVLPCDVISDQ--EIKDLFVE   96 (280)
T ss_dssp             TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHHHHHHHHGGG---CCSEEEECCTTCHH--HHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHHHHHHHHHhc---CCceEEEeecCCHH--HHHHHHHH
Confidence            4789999999988  7899999999999999999999544 556666665543   46889999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCC---CCCCCC-CCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC
Q 024517           80 ACQILGNLDAFVHCYTYEGK---MQDPLQ-VGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL  155 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~---~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~  155 (266)
                      +.+.++++|++|||||....   ..++.+ .+.++|+..+++|+.+++.++++++|+|.++  .|+||++||..+..+  
T Consensus        97 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~--  172 (280)
T 3nrc_A           97 LGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR--NASMVALTYIGAEKA--  172 (280)
T ss_dssp             HHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--TCEEEEEECGGGTSC--
T ss_pred             HHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CCeEEEEeccccccC--
Confidence            99999999999999998533   144455 8899999999999999999999999999865  499999999998877  


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      .++...|+++|+|++.|+++++.|++++||+||+|+||+|+|++.......++.........|.+++.+|+ |+|+.+++
T Consensus       173 ~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pe-dvA~~v~~  251 (280)
T 3nrc_A          173 MPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIM-EVGNTVAF  251 (280)
T ss_dssp             CTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHH-HHHHHHHH
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHH-HHHHHHHH
Confidence            68899999999999999999999999999999999999999999877655566667777888999999988 99999999


Q ss_pred             HccCCCCcccccEEEEcCCccccC
Q 024517          236 LISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      |+++..+++||+.|.+|||.++..
T Consensus       252 l~s~~~~~~tG~~i~vdgG~~~~~  275 (280)
T 3nrc_A          252 LCSDMATGITGEVVHVDAGYHCVS  275 (280)
T ss_dssp             TTSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HhCcccCCcCCcEEEECCCccccC
Confidence            999988999999999999998764

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=1.5e-46  Score=312.99  Aligned_cols=252  Identities=20%  Similarity=0.260  Sum_probs=205.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHH-HHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSS-VAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |++.+|++|||||++|||+++|++|+++|++|++++ +.+...+ ..+.+...   +.++.++.+|+++.+  +++++++
T Consensus         3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~v~~~~~   77 (264)
T 3i4f_A            3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV---EERLQFVQADVTKKE--DLHKIVE   77 (264)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG---GGGEEEEECCTTSHH--HHHHHHH
T ss_pred             cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc---CCceEEEEecCCCHH--HHHHHHH
Confidence            345789999999999999999999999999999987 5443333 33333322   357999999999999  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCC-CCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCC
Q 024517           79 KACQILGNLDAFVHCYTYE-GKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP  157 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  157 (266)
                      ++.+.++++|++|||||.. ....++.+.+.++|+..+++|+.+++.+++.++|+|++++ .++||++||..+....+.+
T Consensus        78 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~  156 (264)
T 3i4f_A           78 EAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSAPGWI  156 (264)
T ss_dssp             HHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGGCCCCT
T ss_pred             HHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhcccCCCC
Confidence            9999999999999999942 3446778889999999999999999999999999998876 6999999998443122257


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      +...|+++|++++.|+++++.|++++||+||+|+||+|.|++.....  ++.........|.+++++|+ |+|+.+++|+
T Consensus       157 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~p~~r~~~~~-dva~~v~~l~  233 (264)
T 3i4f_A          157 YRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATI--QEARQLKEHNTPIGRSGTGE-DIARTISFLC  233 (264)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCH--HHHHHC--------CCCCHH-HHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhcc--HHHHHHHhhcCCCCCCcCHH-HHHHHHHHHc
Confidence            88999999999999999999999999999999999999999876643  34445556678899999988 9999999999


Q ss_pred             cCCCCcccccEEEEcCCccccCCC
Q 024517          238 SDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       238 s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      ++..+++|||+|.+|||.+...+.
T Consensus       234 s~~~~~itG~~i~vdGG~~~~~~~  257 (264)
T 3i4f_A          234 EDDSDMITGTIIEVTGAVDVIHRE  257 (264)
T ss_dssp             SGGGTTCCSCEEEESCSCCCCC--
T ss_pred             CcccCCCCCcEEEEcCceeeccCC
Confidence            998899999999999999887654

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=1.3e-46  Score=312.77  Aligned_cols=247  Identities=24%  Similarity=0.352  Sum_probs=209.1

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++....+ +.++.++.+|++|++  ++++++++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~--~v~~~~~~   79 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVS-GAQVDIVAGDIREPG--DIDRLFEK   79 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHST-TCCEEEEECCTTCHH--HHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-CCeEEEEEccCCCHH--HHHHHHHH
Confidence            557899999999999999999999999999999999 66666666666653211 237899999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++ +|++|||||. ....++.+.+.++|+..+++|+.+++.+++.++|.|.+++ .|+||++||..+..+  .++.
T Consensus        80 ~~~~~g-id~lv~~Ag~-~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~  154 (260)
T 2z1n_A           80 ARDLGG-ADILVYSTGG-PRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLLRP--WQDL  154 (260)
T ss_dssp             HHHTTC-CSEEEECCCC-CCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC--CTTB
T ss_pred             HHHhcC-CCEEEECCCC-CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcCC--CCCC
Confidence            999999 9999999997 3556777889999999999999999999999999998766 699999999988776  5888


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccc---------cccHHHHHHHhhccCCCCCCCChhhHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA---------VGQERAVKLVREAAPLHRWLDVKNDLA  230 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dva  230 (266)
                      ..|+++|++++.|++.++.|++++||++|+|+||+|+|++....         ...+.....+....|.+++++|+ |+|
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~-dva  233 (260)
T 2z1n_A          155 ALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPE-ELA  233 (260)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHH-HHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHH-HHH
Confidence            99999999999999999999999999999999999999987621         11111123344567888888887 999


Q ss_pred             HHHHHHccCCCCcccccEEEEcCCcc
Q 024517          231 STVIYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      +.+++|+++..++++|+.+.+|||.+
T Consensus       234 ~~v~~l~s~~~~~~tG~~i~vdGG~~  259 (260)
T 2z1n_A          234 SVVAFLASEKASFITGAVIPVDGGAH  259 (260)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHhCccccCCCCCEEEeCCCcc
Confidence            99999999888999999999999975

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=2.4e-47  Score=316.66  Aligned_cols=240  Identities=22%  Similarity=0.329  Sum_probs=196.7

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      |++++|++|||||++|||+++|++|+++|++|+++++.  .++..+++      +.++.++.+|+++.+  +++++++.+
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~--~~~~~~~~------~~~~~~~~~D~~~~~--~v~~~~~~~   74 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR--GEDVVADL------GDRARFAAADVTDEA--AVASALDLA   74 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS--CHHHHHHT------CTTEEEEECCTTCHH--HHHHHHHHH
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCc--hHHHHHhc------CCceEEEECCCCCHH--HHHHHHHHH
Confidence            78899999999999999999999999999999999852  23333333      358999999999999  999999988


Q ss_pred             HHHhCCCCEEEEcCCCCCCC---CCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhcc-------CCCCeEEEEecccc
Q 024517           81 CQILGNLDAFVHCYTYEGKM---QDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES-------KAGGSIVFLTSIIG  150 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-------~~~g~iv~iss~~~  150 (266)
                      .+ ++++|++|||||.....   .+..+.+.++|++++++|+.+++.++++++|+|.+.       ...|+||++||..+
T Consensus        75 ~~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  153 (257)
T 3tl3_A           75 ET-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAA  153 (257)
T ss_dssp             HH-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC-
T ss_pred             HH-hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhh
Confidence            77 99999999999974221   122357899999999999999999999999999872       22689999999988


Q ss_pred             cccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCC-CCCCCChhhH
Q 024517          151 AERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPL-HRWLDVKNDL  229 (266)
Q Consensus       151 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dv  229 (266)
                      ..+  .++...|+++|++++.|+++++.|++++|||||+|+||+|+|++....  .+..........|. +++++|+ |+
T Consensus       154 ~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~r~~~p~-dv  228 (257)
T 3tl3_A          154 FDG--QIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL--PEEARASLGKQVPHPSRLGNPD-EY  228 (257)
T ss_dssp             -CC--HHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC-----CHHHHHHHHHTSSSSCSCBCHH-HH
T ss_pred             cCC--CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc--cHHHHHHHHhcCCCCCCccCHH-HH
Confidence            776  578899999999999999999999999999999999999999998764  34455556677887 8888887 99


Q ss_pred             HHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          230 ASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       230 a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      |+.++||+++  .++|||.|.+|||.++.
T Consensus       229 a~~v~~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          229 GALAVHIIEN--PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HHHHHHHHHC--TTCCSCEEEESTTC---
T ss_pred             HHHHHHHhcC--CCCCCCEEEECCCccCC
Confidence            9999999986  79999999999998765

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=1.6e-46  Score=315.06  Aligned_cols=246  Identities=20%  Similarity=0.283  Sum_probs=214.4

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++.+.   +.++.++.+|+++.+  +++++++++
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~~~~--~v~~~~~~~   93 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA---GVEADGRTCDVRSVP--EIEALVAAV   93 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHH--HHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEECCCCCHH--HHHHHHHHH
Confidence            68899999999999999999999999999999999 666666666666543   357899999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHH--HhccCCCCeEEEEecccccccCCCCC
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR--MKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      .+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.++|.  |.+++ .|+||++||..+..+  .++
T Consensus        94 ~~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~~~~--~~~  169 (277)
T 2rhc_B           94 VERYGPVDVLVNNAGRP-GGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQG--VVH  169 (277)
T ss_dssp             HHHTCSCSEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGGTSC--CTT
T ss_pred             HHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECccccccC--CCC
Confidence            99999999999999984 4567778899999999999999999999999999  87765 689999999988776  578


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc---c------HHHHHHHhhccCCCCCCCChhhH
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---Q------ERAVKLVREAAPLHRWLDVKNDL  229 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~~dv  229 (266)
                      ...|+++|++++.|+++++.|+++.||+||+|+||+++|++......   .      ++....+....|.+++.+|+ |+
T Consensus       170 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~-dv  248 (277)
T 2rhc_B          170 AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPS-EV  248 (277)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHH-HH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHH-HH
Confidence            89999999999999999999999999999999999999998654211   1      22233344567888999988 99


Q ss_pred             HHHHHHHccCCCCcccccEEEEcCCccc
Q 024517          230 ASTVIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       230 a~~~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      |+.+++|+++..++++|+.+.+|||.+.
T Consensus       249 A~~v~~l~s~~~~~~tG~~~~vdGG~~~  276 (277)
T 2rhc_B          249 AEMVAYLIGPGAAAVTAQALNVCGGLGN  276 (277)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHhCchhcCCCCcEEEECCCccc
Confidence            9999999998888999999999999753

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.1e-47  Score=319.91  Aligned_cols=249  Identities=21%  Similarity=0.265  Sum_probs=215.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCC---eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGC---RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAV   77 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~---~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~   77 (266)
                      ++++|++|||||++|||+++|++|+++|+   +|++++ +.++++++.+++....+ +.++.++.+|++|.+  ++++++
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~d~~--~v~~~~  106 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFP-NAKVHVAQLDITQAE--KIKPFI  106 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCT-TCEEEEEECCTTCGG--GHHHHH
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCC-CCeEEEEECCCCCHH--HHHHHH
Confidence            36899999999999999999999999998   999999 77778888888866543 368999999999999  999999


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCC
Q 024517           78 DKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP  157 (266)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  157 (266)
                      +++.+.+|++|++|||||......++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..+  .+
T Consensus       107 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~--~~  183 (287)
T 3rku_A          107 ENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGRDA--YP  183 (287)
T ss_dssp             HTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSC--CT
T ss_pred             HHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhcCC--CC
Confidence            999999999999999999854467788899999999999999999999999999998876 799999999999877  68


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--cHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      +...|+++|+|++.|+++++.|++++|||||+|+||+|+|++......  .+..........|    .+|+ |+|+.++|
T Consensus       184 ~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p----~~pe-dvA~~v~~  258 (287)
T 3rku_A          184 TGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTP----LMAD-DVADLIVY  258 (287)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCC----EEHH-HHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCC----CCHH-HHHHHHHH
Confidence            899999999999999999999999999999999999999998643221  1222233333333    3565 99999999


Q ss_pred             HccCCCCcccccEEEEcCCccccCCC
Q 024517          236 LISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      |+++...+++|+.+.+|||.......
T Consensus       259 l~s~~~~~i~g~~i~v~~g~~~p~~~  284 (287)
T 3rku_A          259 ATSRKQNTVIADTLIFPTNQASPHHI  284 (287)
T ss_dssp             HHTSCTTEEEEEEEEEETTEEETTEE
T ss_pred             HhCCCCCeEecceEEeeCCCCCCccc
Confidence            99999999999999999998765443

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-46  Score=309.20  Aligned_cols=243  Identities=26%  Similarity=0.375  Sum_probs=208.5

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||++++++|+++|++|++++ +.++ ++..+++.       + .++.+|+++.+  ++++++++
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-------~-~~~~~D~~~~~--~~~~~~~~   70 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-------G-AFFQVDLEDER--ERVRFVEE   70 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-------C-EEEECCTTCHH--HHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-------C-CEEEeeCCCHH--HHHHHHHH
Confidence            468899999999999999999999999999999999 5444 55544441       4 78899999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.++++++|+|++++ .|+||++||..+..+  .++.
T Consensus        71 ~~~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~--~~~~  146 (256)
T 2d1y_A           71 AAYALGRVDVLVNNAAIA-APGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFA--EQEN  146 (256)
T ss_dssp             HHHHHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSB--CTTB
T ss_pred             HHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccccccCC--CCCC
Confidence            999999999999999984 456778889999999999999999999999999998766 699999999988776  5889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccc----cccHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA----VGQERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      ..|+++|++++.|+++++.|++++|||+|+|+||+++|++....    ...++....+....|.+++.+|+ |+|+.+++
T Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dvA~~~~~  225 (256)
T 2d1y_A          147 AAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPE-EVAEAVLF  225 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHH-HHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHH
Confidence            99999999999999999999999999999999999999976432    10111222344557888888887 99999999


Q ss_pred             HccCCCCcccccEEEEcCCccccC
Q 024517          236 LISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      |+++..++++|+.+.+|||.+++-
T Consensus       226 l~s~~~~~~~G~~~~v~gG~~~~~  249 (256)
T 2d1y_A          226 LASEKASFITGAILPVDGGMTASF  249 (256)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             HhCchhcCCCCCEEEECCCccccc
Confidence            999888899999999999987643

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.6e-46  Score=310.88  Aligned_cols=234  Identities=19%  Similarity=0.312  Sum_probs=205.5

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.++..            ..++.++.+|+++++  ++++++++
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~~Dv~d~~--~v~~~~~~   89 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA------------DPDIHTVAGDISKPE--TADRIVRE   89 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS------------STTEEEEESCTTSHH--HHHHHHHH
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc------------cCceEEEEccCCCHH--HHHHHHHH
Confidence            457899999999999999999999999999999999 433321            147889999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.+|++|++|||||.. ...++.+.+.++|+.++++|+.+++.++++++|.|.+++ .|+||++||..+..+.+.++.
T Consensus        90 ~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~  167 (260)
T 3un1_A           90 GIERFGRIDSLVNNAGVF-LAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQPMVGMPS  167 (260)
T ss_dssp             HHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSCBTTCCC
T ss_pred             HHHHCCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccCCCCCcc
Confidence            999999999999999984 557788899999999999999999999999999998876 699999999877644334567


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|+++++.|++++|||||+|+||+|+||+...     ..........|.+++++|+ |+|+++++|  .
T Consensus       168 ~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-----~~~~~~~~~~p~~r~~~~~-dva~av~~L--~  239 (260)
T 3un1_A          168 ALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA-----ETHSTLAGLHPVGRMGEIR-DVVDAVLYL--E  239 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG-----GGHHHHHTTSTTSSCBCHH-HHHHHHHHH--H
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH-----HHHHHHhccCCCCCCcCHH-HHHHHHHHh--c
Confidence            8999999999999999999999999999999999999998754     2234455678999999988 999999999  3


Q ss_pred             CCCcccccEEEEcCCcccc
Q 024517          240 GSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~  258 (266)
                      .+.+++|+.|.+|||.++.
T Consensus       240 ~~~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          240 HAGFITGEILHVDGGQNAG  258 (260)
T ss_dssp             HCTTCCSCEEEESTTGGGC
T ss_pred             ccCCCCCcEEEECCCeecc
Confidence            4679999999999998765

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.8e-46  Score=308.34  Aligned_cols=238  Identities=22%  Similarity=0.240  Sum_probs=206.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcC--CeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRG--CRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g--~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +|++|||||++|||+++|++|+++|  +.|++++ +.++++++.+++      +.++.++.+|++|.+  +++++++++.
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~~~~--~v~~~~~~~~   73 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY------GDRFFYVVGDITEDS--VLKQLVNAAV   73 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH------GGGEEEEESCTTSHH--HHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh------CCceEEEECCCCCHH--HHHHHHHHHH
Confidence            6999999999999999999999996  6788888 555566555554      257899999999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.+|++|++|||||......++.+.+.++|+..+++|+.+++.+++.++|+|++++  |+||++||..+..+  .++...
T Consensus        74 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~~--~~~~~~  149 (254)
T 3kzv_A           74 KGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNMY--FSSWGA  149 (254)
T ss_dssp             HHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCCS--SCCSHH
T ss_pred             HhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhccC--CCCcch
Confidence            99999999999999865667888999999999999999999999999999998764  89999999998777  688999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-------cHHHHHHHhhccCCCCCCCChhhHHHHHH
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-------QERAVKLVREAAPLHRWLDVKNDLASTVI  234 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (266)
                      |+++|++++.|+++++.|+  .|||||+|+||+|+|++......       .++....+....|.+|+++|+ |+|+.++
T Consensus       150 Y~asK~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~-dva~~v~  226 (254)
T 3kzv_A          150 YGSSKAALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSS-VPATVYA  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CH-HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcc-cHHHHHH
Confidence            9999999999999999998  58999999999999999865432       244556666788999999998 9999999


Q ss_pred             HHccCC-CCcccccEEEEcCCccc
Q 024517          235 YLISDG-SRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       235 ~l~s~~-~~~~~G~~i~~dgG~~~  257 (266)
                      ||+++. ++++|||.|.+|||...
T Consensus       227 ~L~s~~~~~~itG~~i~vdg~~~~  250 (254)
T 3kzv_A          227 KLALHGIPDGVNGQYLSYNDPALA  250 (254)
T ss_dssp             HHHHHCCCGGGTTCEEETTCGGGG
T ss_pred             HHHhhcccCCCCccEEEecCcccc
Confidence            999998 49999999999999753

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2e-46  Score=317.28  Aligned_cols=252  Identities=21%  Similarity=0.334  Sum_probs=213.9

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++.+......++.++.+|+++++  ++++++++
T Consensus        22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~--~v~~~~~~   99 (297)
T 1xhl_A           22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEAS--GQDDIINT   99 (297)
T ss_dssp             -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHH--HHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHH--HHHHHHHH
Confidence            568899999999999999999999999999999999 666677777776543110117899999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCC--CCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC-
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQD--PLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY-  156 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-  156 (266)
                      +.+.++++|++|||||.. ...+  +.+.+.++|+.++++|+.+++.+++.++|+|.+++  |+||++||..+..+  . 
T Consensus       100 ~~~~~g~iD~lvnnAG~~-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--g~IV~isS~~~~~~--~~  174 (297)
T 1xhl_A          100 TLAKFGKIDILVNNAGAN-LADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK--GEIVNVSSIVAGPQ--AH  174 (297)
T ss_dssp             HHHHHSCCCEEEECCCCC-CCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEECCGGGSSS--CC
T ss_pred             HHHhcCCCCEEEECCCcC-cCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--CEEEEEcCchhccC--CC
Confidence            999999999999999984 3345  77889999999999999999999999999998654  89999999988765  4 


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc-------HHHHHHHhhccCCCCCCCChhhH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ-------ERAVKLVREAAPLHRWLDVKNDL  229 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~dv  229 (266)
                      ++...|+++|++++.|+++++.|++++|||||+|+||+|+|++.......       .+....+....|.+++++|+ |+
T Consensus       175 ~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dv  253 (297)
T 1xhl_A          175 SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPE-EI  253 (297)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHH-HH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHH-HH
Confidence            78899999999999999999999999999999999999999986543100       12223334457888888888 99


Q ss_pred             HHHHHHHccCC-CCcccccEEEEcCCccccCC
Q 024517          230 ASTVIYLISDG-SRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       230 a~~~~~l~s~~-~~~~~G~~i~~dgG~~~~~~  260 (266)
                      |+.+++|+++. .++++|+.|.+|||.++...
T Consensus       254 A~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~  285 (297)
T 1xhl_A          254 ANIIVFLADRNLSSYIIGQSIVADGGSTLVMG  285 (297)
T ss_dssp             HHHHHHHHCHHHHTTCCSCEEEESTTGGGCCG
T ss_pred             HHHHHHHhCCcccCCccCcEEEECCCcccccc
Confidence            99999999987 88999999999999876543

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=5.1e-46  Score=308.37  Aligned_cols=245  Identities=20%  Similarity=0.254  Sum_probs=210.5

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++++|++|||||++|||++++++|+++|++|+++++.+. ++..+++...   +.++.++.+|++|.+  +++++++++.
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~l~~~---~~~~~~~~~D~~~~~--~v~~~~~~~~   74 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP-APALAEIARH---GVKAVHHPADLSDVA--QIEALFALAE   74 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC-HHHHHHHHTT---SCCEEEECCCTTSHH--HHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHhc---CCceEEEeCCCCCHH--HHHHHHHHHH
Confidence            467999999999999999999999999999999985444 5555666432   357889999999998  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.++++|++|||||.. ...++.+.+.++|+.++++|+.+++.+++.++|.|++++ .++||++||..+..+  .++...
T Consensus        75 ~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~~  150 (255)
T 2q2v_A           75 REFGGVDILVNNAGIQ-HVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGLVG--STGKAA  150 (255)
T ss_dssp             HHHSSCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSC--CTTBHH
T ss_pred             HHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhccC--CCCchh
Confidence            9999999999999984 456777889999999999999999999999999998766 689999999988766  578899


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-cHHH---H----HHH-hhccCCCCCCCChhhHHHH
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-QERA---V----KLV-REAAPLHRWLDVKNDLAST  232 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~---~----~~~-~~~~~~~~~~~~~~dva~~  232 (266)
                      |+++|++++.|+++++.|++++||++|+|+||+|+|++...... ....   .    ..+ ....|.+++.+|+ |+|+.
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dvA~~  229 (255)
T 2q2v_A          151 YVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPE-HLGEL  229 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHH-HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHH-HHHHH
Confidence            99999999999999999999999999999999999998653211 0111   1    222 4557888888888 99999


Q ss_pred             HHHHccCCCCcccccEEEEcCCccc
Q 024517          233 VIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       233 ~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +++|+++..++++|+.+.+|||.++
T Consensus       230 ~~~l~s~~~~~~tG~~~~vdgG~~~  254 (255)
T 2q2v_A          230 VLFLCSEAGSQVRGAAWNVDGGWLA  254 (255)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhCCccCCCCCCEEEECCCccC
Confidence            9999998888999999999999764

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=5.1e-46  Score=310.35  Aligned_cols=242  Identities=22%  Similarity=0.310  Sum_probs=213.4

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe--cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG--NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++.+|++|||||++|||+++|++|+++|++|+++.  +.+..++..+++.+.   +.++.++.+|+++.+  ++++++++
T Consensus        23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~--~~~~~~~~   97 (267)
T 4iiu_A           23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN---GGNGRLLSFDVANRE--QCREVLEH   97 (267)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTCHH--HHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc---CCceEEEEecCCCHH--HHHHHHHH
Confidence            46789999999999999999999999999997765  445566666666544   468999999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.+++.|.+....++||++||..+..+  .++.
T Consensus        98 ~~~~~g~id~li~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~  174 (267)
T 4iiu_A           98 EIAQHGAWYGVVSNAGIA-RDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMG--NRGQ  174 (267)
T ss_dssp             HHHHHCCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHC--CTTC
T ss_pred             HHHHhCCccEEEECCCCC-CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccC--CCCC
Confidence            999999999999999984 5567788899999999999999999999999999874433799999999998877  6889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|+|++.|+++++.|++++||++|+|+||+|+|++....   ...........|.+++.+|+ |+|+.+.||+++
T Consensus       175 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~p~~~~~~~e-dva~~~~~L~s~  250 (267)
T 4iiu_A          175 VNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME---ESALKEAMSMIPMKRMGQAE-EVAGLASYLMSD  250 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC---HHHHHHHHHTCTTCSCBCHH-HHHHHHHHHHSG
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc---HHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCC
Confidence            99999999999999999999999999999999999999998653   44455566778999999988 999999999999


Q ss_pred             CCCcccccEEEEcCCc
Q 024517          240 GSRYMTGTTIYVDGAQ  255 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~  255 (266)
                      ..+++|||.|.+|||.
T Consensus       251 ~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          251 IAGYVTRQVISINGGM  266 (267)
T ss_dssp             GGTTCCSCEEEESTTC
T ss_pred             cccCccCCEEEeCCCc
Confidence            8999999999999995

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=3.2e-46  Score=308.74  Aligned_cols=239  Identities=21%  Similarity=0.304  Sum_probs=192.0

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      |++++|++|||||++|||++++++|+++|++|+++++....       . .    ..+.++.+|++|.+  +++++++++
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-------~-~----~~~~~~~~D~~d~~--~~~~~~~~~   68 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-------E-Q----YPFATEVMDVADAA--QVAQVCQRL   68 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-------S-C----CSSEEEECCTTCHH--HHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-------h-c----CCceEEEcCCCCHH--HHHHHHHHH
Confidence            78899999999999999999999999999999999844331       1 1    12788999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.++++++|+|++++ .++||++||..+..+  .++..
T Consensus        69 ~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~--~~~~~  144 (250)
T 2fwm_X           69 LAETERLDALVNAAGIL-RMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAHTP--RIGMS  144 (250)
T ss_dssp             HHHCSCCCEEEECCCCC-CCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSC--CTTCH
T ss_pred             HHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCC--CCCCc
Confidence            99999999999999984 456778889999999999999999999999999998776 699999999988776  57889


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHH-HHhh-------ccCCCCCCCChhhHHHH
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK-LVRE-------AAPLHRWLDVKNDLAST  232 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~dva~~  232 (266)
                      .|+++|++++.|+++++.|++++|||+|+|+||+++|++.......+.... .+..       ..|.+++.+|+ |+|+.
T Consensus       145 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~-dvA~~  223 (250)
T 2fwm_X          145 AYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQ-EIANT  223 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------CHH-HHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHH-HHHHH
Confidence            999999999999999999999999999999999999998654321111111 2222       46778888887 99999


Q ss_pred             HHHHccCCCCcccccEEEEcCCcccc
Q 024517          233 VIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       233 ~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      +++|+++..++++|+.+.+|||.++.
T Consensus       224 v~~l~s~~~~~~tG~~i~vdGG~~~~  249 (250)
T 2fwm_X          224 ILFLASDLASHITLQDIVVDGGSTLG  249 (250)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTTTTT
T ss_pred             HHHHhCccccCCCCCEEEECCCcccC
Confidence            99999988899999999999998654

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=3.2e-46  Score=310.57  Aligned_cols=251  Identities=22%  Similarity=0.299  Sum_probs=214.0

Q ss_pred             CCCCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDG--DEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |++++|++|||||+  +|||+++|++|+++|++|+++++.++.++..+++.+..   ..+.++.+|+++++  +++++++
T Consensus         4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~--~v~~~~~   78 (261)
T 2wyu_A            4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEAL---GGALLFRADVTQDE--ELDALFA   78 (261)
T ss_dssp             ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHT---TCCEEEECCTTCHH--HHHHHHH
T ss_pred             cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc---CCcEEEECCCCCHH--HHHHHHH
Confidence            35789999999999  99999999999999999999995444555556665432   24788999999998  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCC---CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC
Q 024517           79 KACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL  155 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~  155 (266)
                      ++.+.++++|++|||||....   ..++.+.+.++|+..+++|+.+++.+++++.|+|.+   +|+||++||..+..+  
T Consensus        79 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~--  153 (261)
T 2wyu_A           79 GVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGIVTLTYYASEKV--  153 (261)
T ss_dssp             HHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEEECGGGTSB--
T ss_pred             HHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc---CCEEEEEecccccCC--
Confidence            999999999999999998432   256778899999999999999999999999999864   489999999888766  


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      .++...|+++|++++.|+++++.|++++||+||+|+||+|+|++.......+.....+....|.+++.+|+ |+|+.+++
T Consensus       154 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dva~~v~~  232 (261)
T 2wyu_A          154 VPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQE-EVGNLGLF  232 (261)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHH-HHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHH-HHHHHHHH
Confidence            57889999999999999999999999999999999999999998754322233444455668889999887 99999999


Q ss_pred             HccCCCCcccccEEEEcCCccccCCCc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      |+++...+++|+.+.+|||.+++..++
T Consensus       233 l~s~~~~~~tG~~~~vdgG~~~~~~~~  259 (261)
T 2wyu_A          233 LLSPLASGITGEVVYVDAGYHIMGMEL  259 (261)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGBC---
T ss_pred             HcChhhcCCCCCEEEECCCccccCCCC
Confidence            999888999999999999998876543

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=1.3e-45  Score=311.46  Aligned_cols=249  Identities=24%  Similarity=0.314  Sum_probs=210.0

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cc-cccHHHHHHHhcccCCCCCeEEEEEecCCCc---------
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDR---------   69 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---------   69 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +. ++++++.+++....  +.++.++.+|+++.+         
T Consensus         5 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~   82 (291)
T 1e7w_A            5 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR--PNSAITVQADLSNVATAPVSGADG   82 (291)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS--TTCEEEEECCCSSSCBCCCC----
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhc--CCeeEEEEeecCCccccccccccc
Confidence            357899999999999999999999999999999988 55 44555666664222  358999999999865         


Q ss_pred             ------hHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCC--------------HHHHHHHHHccchHHHHHHHHH
Q 024517           70 ------EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVG--------------EDEFKKLVKINFVAPWFLLKAV  129 (266)
Q Consensus        70 ------~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~  129 (266)
                            .++++++++++.+.++++|+||||||.. ...++.+.+              .++|+.++++|+.+++.+++.+
T Consensus        83 ~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  161 (291)
T 1e7w_A           83 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF-YPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF  161 (291)
T ss_dssp             CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccccchHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHH
Confidence                  1168999999999999999999999984 446677777              8999999999999999999999


Q ss_pred             HHHHhccCC-----CCeEEEEecccccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc
Q 024517          130 GRRMKESKA-----GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV  204 (266)
Q Consensus       130 ~~~~~~~~~-----~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~  204 (266)
                      +|+|.+++.     .++||++||..+..+  .++...|+++|++++.|+++++.|++++|||||+|+||+|+|++ .  .
T Consensus       162 ~~~m~~~~~~~~~~~g~Iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--~  236 (291)
T 1e7w_A          162 AHRVAGTPAKHRGTNYSIINMVDAMTNQP--LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--M  236 (291)
T ss_dssp             HHHHHTSCGGGSCSCEEEEEECCTTTTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--S
T ss_pred             HHHHHhcCCCCCCCCcEEEEEechhhcCC--CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--C
Confidence            999986541     489999999988776  68899999999999999999999999999999999999999998 4  2


Q ss_pred             ccHHHHHHHhhccCCC-CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccC
Q 024517          205 GQERAVKLVREAAPLH-RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       205 ~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      . +.....+....|++ ++.+|+ |+|+.++||+++..+++||+.+.+|||.++++
T Consensus       237 ~-~~~~~~~~~~~p~~~r~~~pe-dvA~~v~~l~s~~~~~itG~~i~vdGG~~~~~  290 (291)
T 1e7w_A          237 P-PAVWEGHRSKVPLYQRDSSAA-EVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR  290 (291)
T ss_dssp             C-HHHHHHHHTTCTTTTSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             C-HHHHHHHHhhCCCCCCCCCHH-HHHHHHHHHhCCcccCccCcEEEECCCccccc
Confidence            2 33444555677888 888887 99999999999888999999999999988754

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=7e-47  Score=318.61  Aligned_cols=244  Identities=23%  Similarity=0.286  Sum_probs=202.5

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-c------------ccccHHHHHHHhcccCCCCCeEEEEEecCCC
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-N------------ERRLSSVAEKMMGSLKGGQPVEVVGLDMEED   68 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~------------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   68 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +            .+.+++...++...   +.++.++.+|+++.
T Consensus         7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~   83 (287)
T 3pxx_A            7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT---GRKAYTAEVDVRDR   83 (287)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT---TSCEEEEECCTTCH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc---CCceEEEEccCCCH
Confidence            57899999999999999999999999999999998 4            33444444555433   46899999999999


Q ss_pred             chHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           69 REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                      +  +++++++++.+.++++|++|||||.... .  .+.+.++|+..+++|+.+++.++++++|+|.+   .++||++||.
T Consensus        84 ~--~v~~~~~~~~~~~g~id~lv~nAg~~~~-~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~  155 (287)
T 3pxx_A           84 A--AVSRELANAVAEFGKLDVVVANAGICPL-G--AHLPVQAFADAFDVDFVGVINTVHAALPYLTS---GASIITTGSV  155 (287)
T ss_dssp             H--HHHHHHHHHHHHHSCCCEEEECCCCCCC-C--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCT---TCEEEEECCH
T ss_pred             H--HHHHHHHHHHHHcCCCCEEEECCCcCcc-c--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhc---CcEEEEeccc
Confidence            9  9999999999999999999999998433 2  33788999999999999999999999999943   5899999999


Q ss_pred             cccccCC---------CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc------------H
Q 024517          149 IGAERGL---------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ------------E  207 (266)
Q Consensus       149 ~~~~~~~---------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~------------~  207 (266)
                      .+..+..         .++...|+++|++++.|+++++.|++++|||||+|+||+|+|++.......            .
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  235 (287)
T 3pxx_A          156 AGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRA  235 (287)
T ss_dssp             HHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHH
T ss_pred             hhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhH
Confidence            8765410         156778999999999999999999999999999999999999997642110            0


Q ss_pred             HHHHH--HhhccCCCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          208 RAVKL--VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       208 ~~~~~--~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      +....  .....| +++++|+ |+|++++||+|+.++++||+.|.+|||.++.
T Consensus       236 ~~~~~~~~~~~~~-~~~~~p~-dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          236 DALLAFPAMQAMP-TPYVEAS-DISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             HHHHHGGGGCSSS-CSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             HHHhhhhhhcccC-CCCCCHH-HHHhhHheecchhhcCCCCceEeECchhhhc
Confidence            11111  233445 6788887 9999999999999999999999999998763

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=2.1e-46  Score=310.42  Aligned_cols=243  Identities=21%  Similarity=0.307  Sum_probs=216.8

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe--cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG--NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++|++|||||++|||+++|++|+++|++|++++  +.+..++..+++...   +.++.++.+|+++.+  +++++++++
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~~   79 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN---GGSAFSIGANLESLH--GVEALYSSL   79 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT---TCEEEEEECCTTSHH--HHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc---CCceEEEecCcCCHH--HHHHHHHHH
Confidence            5799999999999999999999999999999864  556667777777654   467899999999998  999999999


Q ss_pred             HHHhC------CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC
Q 024517           81 CQILG------NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG  154 (266)
Q Consensus        81 ~~~~g------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~  154 (266)
                      .+.++      ++|++|||||. ....++.+.+.++|++++++|+.+++.+++.++|+|++   .++||++||..+..+ 
T Consensus        80 ~~~~~~~~~~~~id~lv~nAg~-~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~isS~~~~~~-  154 (255)
T 3icc_A           80 DNELQNRTGSTKFDILINNAGI-GPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRIINISSAATRIS-  154 (255)
T ss_dssp             HHHHHHHHSSSCEEEEEECCCC-CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCGGGTSC-
T ss_pred             HHHhcccccCCcccEEEECCCC-CCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC---CCEEEEeCChhhccC-
Confidence            88764      49999999998 45667788899999999999999999999999999954   589999999998877 


Q ss_pred             CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHH
Q 024517          155 LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI  234 (266)
Q Consensus       155 ~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (266)
                       .++...|+++|++++.|+++++.|++++||+||+|+||+++|++.......+..........|.+++.+|+ |+|+.+.
T Consensus       155 -~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~  232 (255)
T 3icc_A          155 -LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVE-DIADTAA  232 (255)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHH-HHHHHHH
T ss_pred             -CCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHH-HHHHHHH
Confidence             68899999999999999999999999999999999999999999887766666667777788999999988 9999999


Q ss_pred             HHccCCCCcccccEEEEcCCccc
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      ||+++..++++|+.|.+|||.++
T Consensus       233 ~l~s~~~~~~tG~~i~vdgG~~l  255 (255)
T 3icc_A          233 FLASPDSRWVTGQLIDVSGGSCL  255 (255)
T ss_dssp             HHHSGGGTTCCSCEEEESSSTTC
T ss_pred             HHhCcccCCccCCEEEecCCeeC
Confidence            99999999999999999999764

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=1.5e-45  Score=310.34  Aligned_cols=251  Identities=23%  Similarity=0.274  Sum_probs=213.3

Q ss_pred             CC-CCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHH
Q 024517            1 ME-NQAKRVLLTSDG--DEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAV   77 (266)
Q Consensus         1 m~-l~~k~vlItGa~--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~   77 (266)
                      |+ +++|++|||||+  +|||+++|++|+++|++|+++++.+..++..+++....   ..+.++.+|+++.+  ++++++
T Consensus        16 m~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~--~v~~~~   90 (285)
T 2p91_A           16 MGLLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGF---GSDLVVKCDVSLDE--DIKNLK   90 (285)
T ss_dssp             -CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT---TCCCEEECCTTCHH--HHHHHH
T ss_pred             hhccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEcCCCCHH--HHHHHH
Confidence            44 789999999999  99999999999999999999995444555666665432   23678999999998  999999


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCC---CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC
Q 024517           78 DKACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG  154 (266)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~  154 (266)
                      +++.+.++++|++|||||....   ..++.+.+.++|+..+++|+.+++.+++.++|+|.++  +|+||++||..+..+ 
T Consensus        91 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~-  167 (285)
T 2p91_A           91 KFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR--NGAIVTLSYYGAEKV-  167 (285)
T ss_dssp             HHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS--CCEEEEEECGGGTSB-
T ss_pred             HHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCEEEEEccchhccC-
Confidence            9999999999999999998432   2567788999999999999999999999999999753  589999999988766 


Q ss_pred             CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHH
Q 024517          155 LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI  234 (266)
Q Consensus       155 ~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (266)
                       .++...|+++|++++.|+++++.|++++||+||+|+||+|+|++..................|.+++.+|+ |+|+.++
T Consensus       168 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dva~~~~  245 (285)
T 2p91_A          168 -VPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIE-DVGDTAV  245 (285)
T ss_dssp             -CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHH-HHHHHHH
T ss_pred             -CCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHH-HHHHHHH
Confidence             57888999999999999999999999999999999999999998754322233444455667888988887 9999999


Q ss_pred             HHccCCCCcccccEEEEcCCccccCCC
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      +|+++...+++|+.+.+|||.++..+.
T Consensus       246 ~l~s~~~~~~tG~~~~vdgg~~~~~~~  272 (285)
T 2p91_A          246 FLCSDWARAITGEVVHVDNGYHIMGVF  272 (285)
T ss_dssp             HHTSGGGTTCCSCEEEESTTGGGBSCC
T ss_pred             HHcCCcccCCCCCEEEECCCccccccc
Confidence            999988899999999999998876543

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=3.2e-46  Score=314.40  Aligned_cols=239  Identities=17%  Similarity=0.170  Sum_probs=209.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-ccc-------ccHHHHHHHhcccCCCCCeEEEEEecCCCchHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NER-------RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGA   72 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   72 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+       .+++..+++...   +.++.++.+|+++.+  +
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~--~   79 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA---GGQALPIVGDIRDGD--A   79 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH---TSEEEEEECCTTSHH--H
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc---CCcEEEEECCCCCHH--H
Confidence            788999999999999999999999999999999999 544       355666666544   468999999999999  9


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccc
Q 024517           73 FDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAE  152 (266)
Q Consensus        73 v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~  152 (266)
                      ++++++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..
T Consensus        80 v~~~~~~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~  157 (285)
T 3sc4_A           80 VAAAVAKTVEQFGGIDICVNNASAI-NLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD-NPHILTLSPPIRLE  157 (285)
T ss_dssp             HHHHHHHHHHHHSCCSEEEECCCCC-CCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS-SCEEEECCCCCCCS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhcc
Confidence            9999999999999999999999984 567888999999999999999999999999999998876 79999999998876


Q ss_pred             cCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecC-cccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHH
Q 024517          153 RGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG-LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAS  231 (266)
Q Consensus       153 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  231 (266)
                      +. .++...|+++|++++.|+++++.|++++|||||+|+|| .+.|++...         ......|.+++.+|+ |+|+
T Consensus       158 ~~-~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~---------~~~~~~~~~r~~~pe-dvA~  226 (285)
T 3sc4_A          158 PK-WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQN---------LLGGDEAMARSRKPE-VYAD  226 (285)
T ss_dssp             GG-GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHH---------HHTSCCCCTTCBCTH-HHHH
T ss_pred             CC-CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHh---------hccccccccCCCCHH-HHHH
Confidence            63 26779999999999999999999999999999999999 688876532         223455788889998 9999


Q ss_pred             HHHHHccCCCCcccccEEEEcCCcccc
Q 024517          232 TVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       232 ~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      .++||+++.+ ++||+.+.+|||....
T Consensus       227 ~~~~l~s~~~-~~tG~~i~~dgg~~~~  252 (285)
T 3sc4_A          227 AAYVVLNKPS-SYTGNTLLCEDVLLES  252 (285)
T ss_dssp             HHHHHHTSCT-TCCSCEEEHHHHHHHH
T ss_pred             HHHHHhCCcc-cccceEEEEcCchhcc
Confidence            9999999887 9999999999987643

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=1.5e-45  Score=310.84  Aligned_cols=246  Identities=25%  Similarity=0.359  Sum_probs=206.3

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cc-cccHHHHHHHhcccCCCCCeEEEEEecCC----CchHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEE----DREGAFD   74 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~----~~~~~v~   74 (266)
                      +++++|++|||||++|||+++|++|+++|++|++++ +. ++++++.+++....  +.++.++.+|+++    .+  +++
T Consensus        19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~~~~~~~~--~v~   94 (288)
T 2x9g_A           19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER--SNTAVVCQADLTNSNVLPA--SCE   94 (288)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHS--TTCEEEEECCCSCSTTHHH--HHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhc--CCceEEEEeecCCccCCHH--HHH
Confidence            357899999999999999999999999999999999 55 66677777765222  3578999999999    77  999


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCCCCCCCC-----CC-----CCHHHHHHHHHccchHHHHHHHHHHHHHhccCC-----C
Q 024517           75 EAVDKACQILGNLDAFVHCYTYEGKMQDP-----LQ-----VGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA-----G  139 (266)
Q Consensus        75 ~~~~~~~~~~g~id~li~~ag~~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-----~  139 (266)
                      ++++++.+.++++|+||||||.. ...++     .+     .+.++|+..+++|+.+++.+++.++|+|.+++.     .
T Consensus        95 ~~~~~~~~~~g~iD~lvnnAG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~  173 (288)
T 2x9g_A           95 EIINSCFRAFGRCDVLVNNASAF-YPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSN  173 (288)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCC-CCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCCC-CCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCC
Confidence            99999999999999999999984 33455     55     778999999999999999999999999976531     4


Q ss_pred             CeEEEEecccccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCC
Q 024517          140 GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPL  219 (266)
Q Consensus       140 g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~  219 (266)
                      |+||++||..+..+  .++...|+++|++++.|+++++.|++++|||||+|+||+|.|++ . . . ......+....|.
T Consensus       174 g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~-~-~~~~~~~~~~~p~  247 (288)
T 2x9g_A          174 LSIVNLCDAMVDQP--CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M-G-EEEKDKWRRKVPL  247 (288)
T ss_dssp             EEEEEECCTTTTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S-C-HHHHHHHHHTCTT
T ss_pred             eEEEEEecccccCC--CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c-C-hHHHHHHHhhCCC
Confidence            89999999988776  68889999999999999999999999999999999999999998 3 2 1 2223344456788


Q ss_pred             CCC-CCChhhHHHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          220 HRW-LDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       220 ~~~-~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      +++ .+|+ |+|+.++||+++..+++||+.|.+|||.++.
T Consensus       248 ~r~~~~pe-dvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  286 (288)
T 2x9g_A          248 GRREASAE-QIADAVIFLVSGSAQYITGSIIKVDGGLSLV  286 (288)
T ss_dssp             TSSCCCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCCCCHH-HHHHHHHHHhCccccCccCCEEEECcchhhh
Confidence            888 7887 9999999999998899999999999998754

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=2.2e-46  Score=313.67  Aligned_cols=237  Identities=14%  Similarity=0.185  Sum_probs=201.4

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccc-------cHHHHHHHhcccCCCCCeEEEEEecCCCchHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERR-------LSSVAEKMMGSLKGGQPVEVVGLDMEEDREGA   72 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   72 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.++       +++..+++...   +.++.++.+|+++.+  +
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~--~   76 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA---GGQGLALKCDIREED--Q   76 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH---TSEEEEEECCTTCHH--H
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc---CCeEEEEeCCCCCHH--H
Confidence            789999999999999999999999999999999999 4443       45555555543   468999999999999  9


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccc
Q 024517           73 FDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAE  152 (266)
Q Consensus        73 v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~  152 (266)
                      ++++++++.+.+|++|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..
T Consensus        77 v~~~~~~~~~~~g~iD~lvnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~  154 (274)
T 3e03_A           77 VRAAVAATVDTFGGIDILVNNASAI-WLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSLN  154 (274)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEECCCCCCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcc-cCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEECChHhcC
Confidence            9999999999999999999999984 557788899999999999999999999999999998876 79999999998765


Q ss_pred             cCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecC-cccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHH
Q 024517          153 RGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG-LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAS  231 (266)
Q Consensus       153 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  231 (266)
                      +...++...|+++|++++.|+++++.|++++|||||+|+|| .++|++....           ...+..++.+|+ |+|+
T Consensus       155 ~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~-----------~~~~~~~~~~pe-dvA~  222 (274)
T 3e03_A          155 PAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINML-----------PGVDAAACRRPE-IMAD  222 (274)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------------------CCCGGGSBCTH-HHHH
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhc-----------ccccccccCCHH-HHHH
Confidence            42125678899999999999999999999999999999999 6899886321           122344567787 9999


Q ss_pred             HHHHHccCCCCcccccEEEEcCCccc
Q 024517          232 TVIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       232 ~~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      .++||+++..+++|||.| +|||...
T Consensus       223 ~v~~l~s~~~~~itG~~i-~~~g~~~  247 (274)
T 3e03_A          223 AAHAVLTREAAGFHGQFL-IDDEVLA  247 (274)
T ss_dssp             HHHHHHTSCCTTCCSCEE-EHHHHHH
T ss_pred             HHHHHhCccccccCCeEE-EcCcchh
Confidence            999999999999999999 8877544

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=9.9e-46  Score=311.13  Aligned_cols=245  Identities=24%  Similarity=0.387  Sum_probs=208.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccc-cHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERR-LSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+. .++..+++...   +.++.++.+|+++.+  +++++++
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~   99 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN---GSDAACVKANVGVVE--DIVRMFE   99 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTCHH--HHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh---CCCeEEEEcCCCCHH--HHHHHHH
Confidence            467899999999999999999999999999999998 4433 44455555443   357899999999998  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++.+.++++|++|||||.. ...++.+.+.++|+..+++|+.++++++++++|+|.  + .|+||++||..+..+. .+.
T Consensus       100 ~~~~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~-~g~iv~isS~~~~~~~-~~~  174 (283)
T 1g0o_A          100 EAVKIFGKLDIVCSNSGVV-SFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--I-GGRLILMGSITGQAKA-VPK  174 (283)
T ss_dssp             HHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--T-TCEEEEECCGGGTCSS-CSS
T ss_pred             HHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--c-CCeEEEEechhhccCC-CCC
Confidence            9999999999999999984 456778889999999999999999999999999993  2 5899999999887652 134


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc---------cHHHHHHHhh--ccCCCCCCCChh
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---------QERAVKLVRE--AAPLHRWLDVKN  227 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~--~~~~~~~~~~~~  227 (266)
                      ...|+++|++++.|+++++.|++++||+||+|+||+|+|++......         .++....+..  ..|.+++++|+ 
T Consensus       175 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-  253 (283)
T 1g0o_A          175 HAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPI-  253 (283)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHH-
T ss_pred             CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHH-
Confidence            88999999999999999999999999999999999999997644210         1223333444  67899999988 


Q ss_pred             hHHHHHHHHccCCCCcccccEEEEcCCcc
Q 024517          228 DLASTVIYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       228 dva~~~~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      |+|+.++||+++..+++||+.+.+|||.+
T Consensus       254 dvA~~v~~l~s~~~~~itG~~i~vdgG~~  282 (283)
T 1g0o_A          254 DIARVVCFLASNDGGWVTGKVIGIDGGAC  282 (283)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHHhCccccCcCCCEEEeCCCcc
Confidence            99999999999888999999999999975

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=8.4e-46  Score=310.34  Aligned_cols=246  Identities=21%  Similarity=0.286  Sum_probs=212.6

Q ss_pred             CC-CCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHH
Q 024517            1 ME-NQAKRVLLTSDG--DEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAV   77 (266)
Q Consensus         1 m~-l~~k~vlItGa~--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~   77 (266)
                      |. +++|++|||||+  +|||+++|++|+++|++|+++++.+..++..+++.+..   .++.++.+|+++.+  ++++++
T Consensus         1 M~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~--~v~~~~   75 (275)
T 2pd4_A            1 MGFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQEL---NSPYVYELDVSKEE--HFKSLY   75 (275)
T ss_dssp             -CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHT---TCCCEEECCTTCHH--HHHHHH
T ss_pred             CCCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEcCCCCHH--HHHHHH
Confidence            55 789999999999  99999999999999999999994444555666665432   24788999999998  999999


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCC---CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC
Q 024517           78 DKACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG  154 (266)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~  154 (266)
                      +++.+.++++|++|||||....   ..++.+.+.++|+..+++|+.+++.+++.++|+|++   +|+||++||..+..+ 
T Consensus        76 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~-  151 (275)
T 2pd4_A           76 NSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN---GASVLTLSYLGSTKY-  151 (275)
T ss_dssp             HHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSB-
T ss_pred             HHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEecchhcCC-
Confidence            9999999999999999998433   256778899999999999999999999999999974   489999999988776 


Q ss_pred             CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHH
Q 024517          155 LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI  234 (266)
Q Consensus       155 ~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (266)
                       .++...|+++|++++.|+++++.|++++||+||+|+||+|+|++.......+.....+....|.+++.+|+ |+|+.++
T Consensus       152 -~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~-dva~~~~  229 (275)
T 2pd4_A          152 -MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLE-EVGNAGM  229 (275)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHH-HHHHHHH
T ss_pred             -CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHH-HHHHHHH
Confidence             58889999999999999999999999999999999999999998765432233444455667888988887 9999999


Q ss_pred             HHccCCCCcccccEEEEcCCccc
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +|+++...+++|+.+.+|||...
T Consensus       230 ~l~s~~~~~~tG~~~~vdgg~~~  252 (275)
T 2pd4_A          230 YLLSSLSSGVSGEVHFVDAGYHV  252 (275)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCccccCCCCCEEEECCCccc
Confidence            99998889999999999999876

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.9e-46  Score=310.44  Aligned_cols=243  Identities=19%  Similarity=0.322  Sum_probs=208.0

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||++++++|+++|++|++++ +.++.+++.+++       .++.++.+|++|.+  +++++++++
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~Dv~d~~--~v~~~~~~~   76 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL-------PGAVFILCDVTQED--DVKTLVSET   76 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-------TTEEEEECCTTSHH--HHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------cCCeEEEcCCCCHH--HHHHHHHHH
Confidence            46799999999999999999999999999999999 545555444433       24789999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||||......++.+.+.++|+..+++|+.+++.++++++|+|.++  .++||++||..+..+  .+...
T Consensus        77 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~--~~~~~  152 (270)
T 1yde_A           77 IRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLVGAIG--QAQAV  152 (270)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHHHHHC--CTTCH
T ss_pred             HHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC--CCEEEEEcCccccCC--CCCCc
Confidence            99999999999999985445677888999999999999999999999999999765  489999999988776  57889


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc---c-HHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---Q-ERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      .|+++|++++.|+++++.|++++|||||+|+||+|+|++......   . ...........|++|+++|+ |+|+.++||
T Consensus       153 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dva~~v~~L  231 (270)
T 1yde_A          153 PYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPA-EVGAAAVFL  231 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHH-HHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHH-HHHHHHHHH
Confidence            999999999999999999999999999999999999998643211   1 11122223567899999988 999999999


Q ss_pred             ccCCCCcccccEEEEcCCccccC
Q 024517          237 ISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      +++ .+++|||.|.+|||.++..
T Consensus       232 ~s~-~~~itG~~i~vdGG~~~~~  253 (270)
T 1yde_A          232 ASE-ANFCTGIELLVTGGAELGY  253 (270)
T ss_dssp             HHH-CTTCCSCEEEESTTTTSCC
T ss_pred             ccc-CCCcCCCEEEECCCeeccc
Confidence            997 6899999999999987653

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=8e-46  Score=308.49  Aligned_cols=245  Identities=22%  Similarity=0.294  Sum_probs=209.4

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++.      .++.++.+|++|.+  ++++++++
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~d~~--~v~~~~~~   79 (263)
T 3ak4_A            8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE------NGGFAVEVDVTKRA--SVDAAMQK   79 (263)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT------TCCEEEECCTTCHH--HHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh------cCCeEEEEeCCCHH--HHHHHHHH
Confidence            457899999999999999999999999999999999 5444444433331      26788999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.+|++|++|||||.. ...++.+.+.++|+..+++|+.+++.++++++|+|.+++..++||++||..+..+  .+..
T Consensus        80 ~~~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~  156 (263)
T 3ak4_A           80 AIDALGGFDLLCANAGVS-TMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVG--APLL  156 (263)
T ss_dssp             HHHHHTCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC--CTTC
T ss_pred             HHHHcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccC--CCCc
Confidence            999999999999999984 4567788899999999999999999999999999987543589999999988766  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----c-----HHHHHHHhhccCCCCCCCChhhHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----Q-----ERAVKLVREAAPLHRWLDVKNDLA  230 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~~dva  230 (266)
                      ..|+++|++++.|+++++.|+++.|||+|+|+||+++|++......    .     +.....+....|.+++.+|+ |+|
T Consensus       157 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dvA  235 (263)
T 3ak4_A          157 AHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPE-DVA  235 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHH-HHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHH-HHH
Confidence            9999999999999999999999999999999999999998643210    0     22233445567888989887 999


Q ss_pred             HHHHHHccCCCCcccccEEEEcCCccc
Q 024517          231 STVIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +.+++|+++..++++|+.+.+|||.++
T Consensus       236 ~~v~~l~s~~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          236 DVVVFLASDAARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             HHHHHHhCccccCCCCCEEEECcCEeC
Confidence            999999998888999999999999764

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=7.3e-46  Score=311.48  Aligned_cols=250  Identities=22%  Similarity=0.332  Sum_probs=212.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++........++.++.+|+++++  +++++++++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~--~v~~~~~~~   80 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTED--GQDQIINST   80 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHH--HHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHH--HHHHHHHHH
Confidence            47899999999999999999999999999999999 666677777776543110117899999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCC----CCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC
Q 024517           81 CQILGNLDAFVHCYTYEGKMQD----PLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY  156 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  156 (266)
                      .+.++++|++|||||.. ...+    +.+.+.++|+.++++|+.+++.+++.++|+|.+++  |+||++||..+..+. .
T Consensus        81 ~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~-~  156 (280)
T 1xkq_A           81 LKQFGKIDVLVNNAGAA-IPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVNVSSIVAGPQA-Q  156 (280)
T ss_dssp             HHHHSCCCEEEECCCCC-CCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGSSSC-C
T ss_pred             HHhcCCCCEEEECCCCC-CCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC--CcEEEecCccccCCC-C
Confidence            99999999999999984 3344    67889999999999999999999999999998654  899999999887652 2


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc--c-----cHHHHHHHhhccCCCCCCCChhhH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV--G-----QERAVKLVREAAPLHRWLDVKNDL  229 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~dv  229 (266)
                      ++...|+++|++++.|+++++.|++++|||||+|+||+|+|++.....  .     ..+....+....|.+++.+|+ |+
T Consensus       157 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pe-dv  235 (280)
T 1xkq_A          157 PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPE-HI  235 (280)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHH-HH
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHH-HH
Confidence            788999999999999999999999999999999999999999865431  0     012223334457888888888 99


Q ss_pred             HHHHHHHccCC-CCcccccEEEEcCCcccc
Q 024517          230 ASTVIYLISDG-SRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       230 a~~~~~l~s~~-~~~~~G~~i~~dgG~~~~  258 (266)
                      |+.+++|+++. .++++|+.+.+|||.++.
T Consensus       236 A~~v~~l~s~~~~~~~tG~~i~vdgG~~~~  265 (280)
T 1xkq_A          236 ANIILFLADRNLSFYILGQSIVADGGTSLV  265 (280)
T ss_dssp             HHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHhcCcccccCccCCeEEECCCcccc
Confidence            99999999987 789999999999998764

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=7.9e-46  Score=308.88  Aligned_cols=245  Identities=23%  Similarity=0.296  Sum_probs=211.1

Q ss_pred             CCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDG--DEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++|++|||||+  +|||+++|++|+++|++|+++++.++.++..+++.+..+   ...++.+|+++++  +++++++++
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~--~v~~~~~~~   81 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG---SDIVLQCDVAEDA--SIDTMFAEL   81 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTT---CCCEEECCTTCHH--HHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcC---CcEEEEccCCCHH--HHHHHHHHH
Confidence            789999999999  999999999999999999999954456666666654422   3478899999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCC---CCCCCC-CCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC
Q 024517           81 CQILGNLDAFVHCYTYEGK---MQDPLQ-VGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY  156 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~---~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  156 (266)
                      .+.++++|++|||||....   ..++.+ .+.++|+..+++|+.+++.++++++|+|.+   +|+||++||..+..+  .
T Consensus        82 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~--~  156 (265)
T 1qsg_A           82 GKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAERA--I  156 (265)
T ss_dssp             HTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSB--C
T ss_pred             HHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEcchhhccC--C
Confidence            9999999999999998432   245666 889999999999999999999999999964   489999999988776  5


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      ++...|+++|++++.|+++++.|++++||+||+|+||+|+|++.......+.....+....|.+++.+|+ |+|+.+++|
T Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dva~~v~~l  235 (265)
T 1qsg_A          157 PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIE-DVGNSAAFL  235 (265)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHH-HHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHH-HHHHHHHHH
Confidence            7888999999999999999999999999999999999999998755322233444455567888999888 999999999


Q ss_pred             ccCCCCcccccEEEEcCCcccc
Q 024517          237 ISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      +++...+++|+.+.+|||.+++
T Consensus       236 ~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          236 CSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             TSGGGTTCCSCEEEESTTGGGB
T ss_pred             hCchhcCccCCEEEECCCcCCC
Confidence            9988899999999999998876

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=7.3e-46  Score=311.12  Aligned_cols=256  Identities=21%  Similarity=0.298  Sum_probs=203.0

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||++++++|+++|++|++++ +.+++++..+++......+.++.++.+|+++++  +++++++++
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--~~~~~~~~~   80 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDA--GQDEILSTT   80 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHH--HHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHH--HHHHHHHHH
Confidence            47899999999999999999999999999999999 666666666666321111357899999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCC----CHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc-cccCC
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQV----GEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG-AERGL  155 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~-~~~~~  155 (266)
                      .+.+|++|++|||||.. ...++.+.    +.++|+..+++|+.+++.+++.++|.|++++  |+||++||..+ ..+  
T Consensus        81 ~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~--  155 (278)
T 1spx_A           81 LGKFGKLDILVNNAGAA-IPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHA--  155 (278)
T ss_dssp             HHHHSCCCEEEECCC--------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSSC--
T ss_pred             HHHcCCCCEEEECCCCC-CCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEecccccccC--
Confidence            99999999999999984 44566666    8999999999999999999999999998654  89999999987 655  


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-cHHH------HHHHhhccCCCCCCCChhh
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-QERA------VKLVREAAPLHRWLDVKND  228 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~d  228 (266)
                      .++...|+++|++++.|+++++.|++++||++|+|+||+|.|++...... ....      ........|.+++.+|+ |
T Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-d  234 (278)
T 1spx_A          156 TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQ-D  234 (278)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHH-H
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHH-H
Confidence            57889999999999999999999999999999999999999998654211 1111      23344557888888887 9


Q ss_pred             HHHHHHHHccCCCCc-ccccEEEEcCCccccCCCccCC
Q 024517          229 LASTVIYLISDGSRY-MTGTTIYVDGAQSITRPRMRSY  265 (266)
Q Consensus       229 va~~~~~l~s~~~~~-~~G~~i~~dgG~~~~~~~~~~~  265 (266)
                      +|+.+++|+++...+ ++|+.+.+|||.+++..++.+.
T Consensus       235 vA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~  272 (278)
T 1spx_A          235 IAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQD  272 (278)
T ss_dssp             HHHHHHHHHCHHHHTTCCSCEEEESTTGGGC-------
T ss_pred             HHHHHHHHcCccccCcccCcEEEECCCcccccCccccc
Confidence            999999999876676 9999999999999888776654

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4.9e-46  Score=309.75  Aligned_cols=241  Identities=26%  Similarity=0.386  Sum_probs=206.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||++++++|+++|++|++++ +.+++++..+++.      .++.++.+|++|.+  +++++++++
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~--~v~~~~~~~   74 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE------AEAIAVVADVSDPK--AVEAVFAEA   74 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC------SSEEEEECCTTSHH--HHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------CceEEEEcCCCCHH--HHHHHHHHH
Confidence            47899999999999999999999999999999999 5555554444331      47889999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||||.. ...++.+.+.++|+.++++|+.+++.+++.++|+| ++  .|+||++||..+. +  .++..
T Consensus        75 ~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~--~g~iv~isS~~~~-~--~~~~~  147 (263)
T 2a4k_A           75 LEEFGRLHGVAHFAGVA-HSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE--GGSLVLTGSVAGL-G--AFGLA  147 (263)
T ss_dssp             HHHHSCCCEEEEGGGGT-TTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT--TCEEEEECCCTTC-C--HHHHH
T ss_pred             HHHcCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc--CCEEEEEecchhc-C--CCCcH
Confidence            99999999999999984 55677888999999999999999999999999999 43  5899999999887 4  47788


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.|+++++.|++++||++|+|+||+|+|++....  .+.....+....|.+++.+|+ |+|+.+++|+++.
T Consensus       148 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~p~-dvA~~v~~l~s~~  224 (263)
T 2a4k_A          148 HYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPE-EVAQAALFLLSEE  224 (263)
T ss_dssp             HHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS--CHHHHHHHHHTSTTCSCBCHH-HHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc--CHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCcc
Confidence            9999999999999999999999999999999999999987653  233334455667888988887 9999999999988


Q ss_pred             CCcccccEEEEcCCccccCC
Q 024517          241 SRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~~~~  260 (266)
                      .++++|+.+.+|||.++..|
T Consensus       225 ~~~~tG~~i~vdgG~~~~~~  244 (263)
T 2a4k_A          225 SAYITGQALYVDGGRSIVGP  244 (263)
T ss_dssp             GTTCCSCEEEESTTTTTC--
T ss_pred             ccCCcCCEEEECCCccccCC
Confidence            89999999999999887654

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=3.5e-46  Score=309.19  Aligned_cols=242  Identities=25%  Similarity=0.344  Sum_probs=207.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++      +.++.++.+|+++.+  +++++++++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~--~~~~~~~~~   73 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL------GDAARYQHLDVTIEE--DWQRVVAYA   73 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT------GGGEEEEECCTTCHH--HHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCceeEEEecCCCHH--HHHHHHHHH
Confidence            46899999999999999999999999999999999 555555444433      247889999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||||.. ...++.+.+.++|+.++++|+.+++.+++.++|.|++++ .++||++||..+..+  .++..
T Consensus        74 ~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~  149 (254)
T 1hdc_A           74 REEFGSVDGLVNNAGIS-TGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMG--LALTS  149 (254)
T ss_dssp             HHHHSCCCEEEECCCCC-CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC--CTTCH
T ss_pred             HHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccC--CCCch
Confidence            99999999999999984 446777889999999999999999999999999998776 699999999988776  57889


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCC-CChhhHHHHHHHHccC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWL-DVKNDLASTVIYLISD  239 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dva~~~~~l~s~  239 (266)
                      .|+++|++++.|+++++.|++++||++|+|+||+++|++......  ..........|.+++. +|+ |+|+.+++|+++
T Consensus       150 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~p~~~~~~~~~-dvA~~v~~l~s~  226 (254)
T 1hdc_A          150 SYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGI--RQGEGNYPNTPMGRVGNEPG-EIAGAVVKLLSD  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTC--CCSTTSCTTSTTSSCB-CHH-HHHHHHHHHHSG
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccch--hHHHHHHhcCCCCCCCCCHH-HHHHHHHHHhCc
Confidence            999999999999999999999999999999999999997643211  1111223346778888 777 999999999998


Q ss_pred             CCCcccccEEEEcCCcccc
Q 024517          240 GSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~  258 (266)
                      ..++++|+.+.+|||.+..
T Consensus       227 ~~~~~tG~~~~vdgG~~~~  245 (254)
T 1hdc_A          227 TSSYVTGAELAVDGGWTTG  245 (254)
T ss_dssp             GGTTCCSCEEEESTTTTTS
T ss_pred             hhcCCCCCEEEECCCcccc
Confidence            8889999999999998763

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=4.2e-46  Score=307.99  Aligned_cols=240  Identities=23%  Similarity=0.260  Sum_probs=202.6

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++.+..+...++.++.+|+++.+  ++++++++
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~--~v~~~~~~   80 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCT--KADTEIKD   80 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHH--HHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHH--HHHHHHHH
Confidence            356899999999999999999999999999999999 777788888888665443368899999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||.. ...++ +.+.++|+.++++|+.+++.++++++|+|++++ .|+||++||..+..+  .++.
T Consensus        81 ~~~~~g~iD~lvnnAg~~-~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~  155 (250)
T 3nyw_A           81 IHQKYGAVDILVNAAAMF-MDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAKYG--FADG  155 (250)
T ss_dssp             HHHHHCCEEEEEECCCCC-CCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC---------CCT
T ss_pred             HHHhcCCCCEEEECCCcC-CCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhcCC--CCCC
Confidence            999999999999999984 44555 778899999999999999999999999998876 799999999998875  3558


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|+++++.|++++|||||+|+||+|+|++....          ....|.+++.+|+ |+|+.++||+++
T Consensus       156 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~----------~~~~~~~~~~~p~-dva~~v~~l~s~  224 (250)
T 3nyw_A          156 GIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKA----------GTPFKDEEMIQPD-DLLNTIRCLLNL  224 (250)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHT----------TCCSCGGGSBCHH-HHHHHHHHHHTS
T ss_pred             cchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhc----------CCCcccccCCCHH-HHHHHHHHHHcC
Confidence            99999999999999999999999999999999999999875432          1234666778887 999999999995


Q ss_pred             C-CCcccccEEEEcCCcccc
Q 024517          240 G-SRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       240 ~-~~~~~G~~i~~dgG~~~~  258 (266)
                      . ..++++..|.+|||....
T Consensus       225 ~~~~~~~~~~i~vd~~~~~~  244 (250)
T 3nyw_A          225 SENVCIKDIVFEMKKSIIEG  244 (250)
T ss_dssp             CTTEECCEEEEEEHHHHHC-
T ss_pred             CCceEeeEEEEEeecccccc
Confidence            4 457888899999996543

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=4.5e-45  Score=304.14  Aligned_cols=241  Identities=19%  Similarity=0.274  Sum_probs=210.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++++|++|||||++|||+++|++|+++|++|+++++....             +.++.++.+|+++.+  +++++++++.
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~Dl~~~~--~v~~~~~~~~   69 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIECDVTNPD--QVKASIDHIF   69 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------------SCSSEEEECCTTCHH--HHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------------CCceEEEEecCCCHH--HHHHHHHHHH
Confidence            3679999999999999999999999999999999843221             147789999999998  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.++|+|++++ .|+||++||..+..+  .++...
T Consensus        70 ~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~~  145 (264)
T 2dtx_A           70 KEYGSISVLVNNAGIE-SYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSIVNISSVQASII--TKNASA  145 (264)
T ss_dssp             HHHSCCCEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGTSC--CTTBHH
T ss_pred             HHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCchhccC--CCCchh
Confidence            9999999999999984 456778889999999999999999999999999998766 699999999988766  588899


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-----cH----HHHHHHhhccCCCCCCCChhhHHHH
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-----QE----RAVKLVREAAPLHRWLDVKNDLAST  232 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-----~~----~~~~~~~~~~~~~~~~~~~~dva~~  232 (266)
                      |+++|++++.|+++++.|+++. ||||+|+||+++|++......     .+    .....+....|.+++++|+ |+|+.
T Consensus       146 Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~-dvA~~  223 (264)
T 2dtx_A          146 YVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQ-EVASA  223 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHH-HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHH-HHHHH
Confidence            9999999999999999999988 999999999999998654210     11    2233344567888988888 99999


Q ss_pred             HHHHccCCCCcccccEEEEcCCccccCCCcc
Q 024517          233 VIYLISDGSRYMTGTTIYVDGAQSITRPRMR  263 (266)
Q Consensus       233 ~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~  263 (266)
                      +++|+++..++++|+.+.+|||.++..|...
T Consensus       224 v~~l~s~~~~~~tG~~i~vdGG~~~~~p~~~  254 (264)
T 2dtx_A          224 VAFLASREASFITGTCLYVDGGLSIRAPIST  254 (264)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGCCCCCC
T ss_pred             HHHHhCchhcCCCCcEEEECCCcccCCCCCC
Confidence            9999998889999999999999998888654

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=2.6e-45  Score=303.59  Aligned_cols=237  Identities=16%  Similarity=0.119  Sum_probs=192.7

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.++++++.+++.+.   +.++.++.+|++|.+  ++++++++
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~--~v~~~~~~   77 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA---GGRIVARSLDARNED--EVTAFLNA   77 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT---TCEEEEEECCTTCHH--HHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEECcCCCHH--HHHHHHHH
Confidence            457899999999999999999999999999999999 778888888888765   468999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+. +++|++|||||.. ...++.+.+.++|+.++++|+.+++.++++++|+|++++ .|+||++||..+..+  .++.
T Consensus        78 ~~~~-g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~  152 (252)
T 3h7a_A           78 ADAH-APLEVTIFNVGAN-VNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASLRG--GSGF  152 (252)
T ss_dssp             HHHH-SCEEEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTCC--CTTC
T ss_pred             HHhh-CCceEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHcCC--CCCC
Confidence            9998 9999999999984 567788899999999999999999999999999998876 699999999998877  6889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEE-EEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRV-NGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v-~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ..|+++|+|++.|+++++.|++++|||| |+|+||+|+|++.....  ...........|.+ +.+|+ |+|+.+++|++
T Consensus       153 ~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~-~~~pe-dvA~~~~~l~s  228 (252)
T 3h7a_A          153 AAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERR--EQMFGKDALANPDL-LMPPA-AVAGAYWQLYQ  228 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------------------------CCHH-HHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccc--hhhhhhhhhcCCcc-CCCHH-HHHHHHHHHHh
Confidence            9999999999999999999999999999 99999999999987643  22223344455666 77777 99999999999


Q ss_pred             CCCCcccccEEEE
Q 024517          239 DGSRYMTGTTIYV  251 (266)
Q Consensus       239 ~~~~~~~G~~i~~  251 (266)
                      +..++++|+....
T Consensus       229 ~~~~~~~~~i~~~  241 (252)
T 3h7a_A          229 QPKSAWTFEMEIR  241 (252)
T ss_dssp             CCGGGBCSEEEEB
T ss_pred             CchhcceeeEEee
Confidence            8888999997644

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=8.6e-46  Score=306.64  Aligned_cols=243  Identities=22%  Similarity=0.235  Sum_probs=209.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||++++++|+++|++|++++ +.+++++..+++      +.++.++.+|+++.+  +++++++++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~--~v~~~~~~~   74 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL------GERSMFVRHDVSSEA--DWTLVMAAV   74 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH------CTTEEEECCCTTCHH--HHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------CCceEEEEccCCCHH--HHHHHHHHH
Confidence            47899999999999999999999999999999999 555555555554      257889999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||||.. ...++.+.+.++|+.++++|+.+++.+++.++|.|++++  ++||++||..+..+  .++..
T Consensus        75 ~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~--~~~~~  149 (253)
T 1hxh_A           75 QRRLGTLNVLVNNAGIL-LPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLP--IEQYA  149 (253)
T ss_dssp             HHHHCSCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTSC--CTTBH
T ss_pred             HHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhcCC--CCCCc
Confidence            99999999999999984 456778889999999999999999999999999998754  89999999988776  58889


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCC--CcEEEEEecCcccCCCcccccccHHHHHHHhh---ccCCCCCCCChhhHHHHHHH
Q 024517          161 AYGACAASIHQLVRTAAMEIGKH--KIRVNGIARGLHLQDEYPIAVGQERAVKLVRE---AAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~--~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~dva~~~~~  235 (266)
                      .|+++|++++.|+++++.|++++  ||++|+|+||++.|++......++.....+..   ..|.+++.+|+ |+|+.+++
T Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dvA~~~~~  228 (253)
T 1hxh_A          150 GYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPE-RIAQLVLF  228 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHH-HHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccCCCCCHH-HHHHHHHH
Confidence            99999999999999999999887  99999999999999986442111111111233   56788888887 99999999


Q ss_pred             HccCCCCcccccEEEEcCCcccc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      |+++..++++|+.+.+|||.+.+
T Consensus       229 l~s~~~~~~tG~~~~vdgG~~~~  251 (253)
T 1hxh_A          229 LASDESSVMSGSELHADNSILGM  251 (253)
T ss_dssp             HHSGGGTTCCSCEEEESSSCTTT
T ss_pred             HcCccccCCCCcEEEECCCcccc
Confidence            99988899999999999997654

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=1.1e-44  Score=303.62  Aligned_cols=243  Identities=24%  Similarity=0.364  Sum_probs=203.2

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-c-cccHHHHHHHhcccCCCCCeEEEEEecCCC----chHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-E-RRLSSVAEKMMGSLKGGQPVEVVGLDMEED----REGAFDEA   76 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~v~~~   76 (266)
                      +++|++|||||++|||+++|++|+++|++|+++++ . ++++++.+++.+..  +.++.++.+|+++.    +  +++++
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~--~~~~~   84 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR--AGSAVLCKGDLSLSSSLLD--CCEDI   84 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS--TTCEEEEECCCSSSTTHHH--HHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc--CCceEEEeccCCCccccHH--HHHHH
Confidence            67899999999999999999999999999999985 4 44555666664332  25789999999999    8  99999


Q ss_pred             HHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCH-----------HHHHHHHHccchHHHHHHHHHHHHHhccCCC------
Q 024517           77 VDKACQILGNLDAFVHCYTYEGKMQDPLQVGE-----------DEFKKLVKINFVAPWFLLKAVGRRMKESKAG------  139 (266)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------  139 (266)
                      ++++.+.++++|++|||||.. ...++.+.+.           ++|+.++++|+.+++.++++++|+|. ++ .      
T Consensus        85 ~~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~-~~~~~~~  161 (276)
T 1mxh_A           85 IDCSFRAFGRCDVLVNNASAY-YPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EG-GAWRSRN  161 (276)
T ss_dssp             HHHHHHHHSCCCEEEECCCCC-CCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC---------CCC
T ss_pred             HHHHHHhcCCCCEEEECCCCC-CCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cC-CCCCCCC
Confidence            999999999999999999984 4456777777           99999999999999999999999987 33 4      


Q ss_pred             CeEEEEecccccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCC
Q 024517          140 GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPL  219 (266)
Q Consensus       140 g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~  219 (266)
                      ++||++||..+..+  .++...|+++|++++.|+++++.|++++||+||+|+||+|.|+ . . . .+.....+....|.
T Consensus       162 g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~-~-~~~~~~~~~~~~p~  235 (276)
T 1mxh_A          162 LSVVNLCDAMTDLP--LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-A-M-PQETQEEYRRKVPL  235 (276)
T ss_dssp             EEEEEECCGGGGSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-S-S-CHHHHHHHHTTCTT
T ss_pred             cEEEEECchhhcCC--CCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-c-C-CHHHHHHHHhcCCC
Confidence            89999999988776  6888999999999999999999999999999999999999999 2 2 1 23333444556788


Q ss_pred             CC-CCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccC
Q 024517          220 HR-WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       220 ~~-~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      ++ +.+|+ |+|+.+++|+++...+++|+.+.+|||.++.+
T Consensus       236 ~r~~~~~~-dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~  275 (276)
T 1mxh_A          236 GQSEASAA-QIADAIAFLVSKDAGYITGTTLKVDGGLILAR  275 (276)
T ss_dssp             TSCCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             CCCCCCHH-HHHHHHHHHhCccccCccCcEEEECCchhccC
Confidence            88 88887 99999999999888999999999999987653

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=2.8e-45  Score=306.21  Aligned_cols=243  Identities=24%  Similarity=0.280  Sum_probs=204.4

Q ss_pred             CCCCcEEEEecC--CCchHHHHHHHHHHcCCeEEEEec-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            2 ENQAKRVLLTSD--GDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         2 ~l~~k~vlItGa--~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      ++++|++|||||  ++|||+++|++|+++|++|+++++ .++.   .+++.+..  +.++.++.+|+++++  +++++++
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~--~~~~~~~~~Dv~~~~--~v~~~~~   76 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRL---IQRITDRL--PAKAPLLELDVQNEE--HLASLAG   76 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHH---HHHHHTTS--SSCCCEEECCTTCHH--HHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHH---HHHHHHhc--CCCceEEEccCCCHH--HHHHHHH
Confidence            478999999999  999999999999999999999984 3331   12222222  246789999999998  9999999


Q ss_pred             HHHHHhC---CCCEEEEcCCCCCC----CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccc
Q 024517           79 KACQILG---NLDAFVHCYTYEGK----MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGA  151 (266)
Q Consensus        79 ~~~~~~g---~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~  151 (266)
                      ++.+.+|   ++|++|||||....    ..++.+.+.++|+..+++|+.+++.++++++|+|.+   +|+||++||..+ 
T Consensus        77 ~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~iss~~~-  152 (269)
T 2h7i_A           77 RVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPS-  152 (269)
T ss_dssp             HHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCS-
T ss_pred             HHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CCeEEEEcCccc-
Confidence            9999999   99999999998432    357778899999999999999999999999999965   489999999765 


Q ss_pred             ccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc---cHH-------HHHHHhhccCCC-
Q 024517          152 ERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---QER-------AVKLVREAAPLH-  220 (266)
Q Consensus       152 ~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~---~~~-------~~~~~~~~~~~~-  220 (266)
                      .+  .+.+..|+++|++++.|+++++.|++++|||||+|+||+|+|++......   .+.       ..+.+....|++ 
T Consensus       153 ~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  230 (269)
T 2h7i_A          153 RA--MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGW  230 (269)
T ss_dssp             SC--CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCC
T ss_pred             cc--cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCccc
Confidence            33  57889999999999999999999999999999999999999997654210   111       223344567988 


Q ss_pred             CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          221 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       221 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      ++++|+ |+|+.++||+|+.++++||+.|.+|||.++.
T Consensus       231 r~~~p~-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  267 (269)
T 2h7i_A          231 NMKDAT-PVAKTVCALLSDWLPATTGDIIYADGGAHTQ  267 (269)
T ss_dssp             CTTCCH-HHHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             CCCCHH-HHHHHHHHHhCchhccCcceEEEecCCeeee
Confidence            699998 9999999999999999999999999998753

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=6.3e-45  Score=302.63  Aligned_cols=237  Identities=24%  Similarity=0.338  Sum_probs=207.0

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.++.++..+++.      .++.++.+|+++++  +++++++++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~--~v~~~~~~~   75 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA------DAARYVHLDVTQPA--QWKAAVDTA   75 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG------GGEEEEECCTTCHH--HHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh------cCceEEEecCCCHH--HHHHHHHHH
Confidence            47899999999999999999999999999999999 5555555555542      25788999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.+|++|++|||||.. ...++.+.+.++|+.++++|+.+++.+++.++|+|++++ .|+||++||..+..+  .++..
T Consensus        76 ~~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~  151 (260)
T 1nff_A           76 VTAFGGLHVLVNNAGIL-NIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAG--TVACH  151 (260)
T ss_dssp             HHHHSCCCEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC--CTTBH
T ss_pred             HHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhcCC--CCCch
Confidence            99999999999999984 456778889999999999999999999999999998766 699999999988776  57889


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.|+++++.|++++||++|+|+||++.|++.. . ..+.    +. ..|.+++.+|+ |+|+.+++|+++.
T Consensus       152 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~-~~~~----~~-~~~~~~~~~~~-dvA~~v~~l~s~~  223 (260)
T 1nff_A          152 GYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-W-VPED----IF-QTALGRAAEPV-EVSNLVVYLASDE  223 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-T-SCTT----CS-CCSSSSCBCHH-HHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-c-chhh----HH-hCccCCCCCHH-HHHHHHHHHhCcc
Confidence            99999999999999999999999999999999999999864 1 1111    11 46778888887 9999999999988


Q ss_pred             CCcccccEEEEcCCcccc
Q 024517          241 SRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~~  258 (266)
                      ..+++|+.+.+|||.+..
T Consensus       224 ~~~~~G~~~~v~gG~~~~  241 (260)
T 1nff_A          224 SSYSTGAEFVVDGGTVAG  241 (260)
T ss_dssp             GTTCCSCEEEESTTGGGS
T ss_pred             ccCCcCCEEEECCCeecc
Confidence            899999999999998763

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=5.5e-45  Score=304.91  Aligned_cols=244  Identities=20%  Similarity=0.274  Sum_probs=202.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe--cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG--NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++|++|||||++|||+++|++|+++|++|++++  +.+..+++.+++.+.   +.++.++.+|+++.+  +++++++++.
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~v~~~~~~~~   99 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES---GGEAVAIPGDVGNAA--DIAAMFSAVD   99 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCEEEEEECCTTCHH--HHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc---CCcEEEEEcCCCCHH--HHHHHHHHHH
Confidence            578999999999999999999999999998874  455566666666543   468999999999998  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhcc--CCCCeEEEEecccccccCCCCCc
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES--KAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.++++|++|||||......++.+.+.++|+.++++|+.+++.+++.++|.|.+.  +..|+||++||..+..+. .+..
T Consensus       100 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~  178 (272)
T 4e3z_A          100 RQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGS-ATQY  178 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCC-TTTC
T ss_pred             HhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCC-CCCc
Confidence            9999999999999986555778889999999999999999999999999999763  226899999999887763 2467


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|+++++.|+++.||++|+|+||+|+|++..... ............|.+++++|+ |+|+.+++|+++
T Consensus       179 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~e-dvA~~i~~l~s~  256 (272)
T 4e3z_A          179 VDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGG-LPDRAREMAPSVPMQRAGMPE-EVADAILYLLSP  256 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------CCTTSSCBCHH-HHHHHHHHHHSG
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccC-ChHHHHHHhhcCCcCCCcCHH-HHHHHHHHHhCC
Confidence            889999999999999999999999999999999999999876532 233344556678888888887 999999999999


Q ss_pred             CCCcccccEEEEcCCc
Q 024517          240 GSRYMTGTTIYVDGAQ  255 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~  255 (266)
                      ...+++|+.|.+|||.
T Consensus       257 ~~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          257 SASYVTGSILNVSGGR  272 (272)
T ss_dssp             GGTTCCSCEEEESTTC
T ss_pred             ccccccCCEEeecCCC
Confidence            8899999999999995

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-44  Score=308.19  Aligned_cols=247  Identities=24%  Similarity=0.322  Sum_probs=208.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cc-cccHHHHHHHhcccCCCCCeEEEEEecCCCc-----------
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDR-----------   69 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----------   69 (266)
                      +++|++|||||++|||+++|++|+++|++|++++ +. ++++++.+++....  +.++.++.+|+++.+           
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~  121 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR--PNSAITVQADLSNVATAPVSGADGSA  121 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS--TTCEEEEECCCSSSCBCC-------C
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc--CCeEEEEEeeCCCchhcccccccccc
Confidence            7899999999999999999999999999999988 54 44555566654222  357999999999865           


Q ss_pred             ----hHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCC--------------HHHHHHHHHccchHHHHHHHHHHH
Q 024517           70 ----EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVG--------------EDEFKKLVKINFVAPWFLLKAVGR  131 (266)
Q Consensus        70 ----~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~  131 (266)
                          ..+++++++++.+.++++|+||||||.. ...++.+.+              .++|+.++++|+.+++.+++.++|
T Consensus       122 ~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~-~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  200 (328)
T 2qhx_A          122 PVTLFTRCAELVAACYTHWGRCDVLVNNASSF-YPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH  200 (328)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                1168999999999999999999999984 446667777              899999999999999999999999


Q ss_pred             HHhccCC-----CCeEEEEecccccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc
Q 024517          132 RMKESKA-----GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ  206 (266)
Q Consensus       132 ~~~~~~~-----~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~  206 (266)
                      +|.+++.     .++||++||..+..+  .++...|+++|++++.|++.++.|++++||+||+|+||+|+|++ ...   
T Consensus       201 ~m~~~~~~~~~~~g~IV~isS~~~~~~--~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~---  274 (328)
T 2qhx_A          201 RVAGTPAKHRGTNYSIINMVDAMTNQP--LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP---  274 (328)
T ss_dssp             HHHHSCGGGSCSCEEEEEECCTTTTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC---
T ss_pred             HHHhcCCcCCCCCcEEEEECchhhccC--CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc---
Confidence            9976531     489999999988776  68889999999999999999999999999999999999999998 332   


Q ss_pred             HHHHHHHhhccCCC-CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccC
Q 024517          207 ERAVKLVREAAPLH-RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       207 ~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      +.....+....|++ ++++|+ |+|+.++||+++...++||+.|.+|||.++++
T Consensus       275 ~~~~~~~~~~~p~~~r~~~pe-dvA~~v~~l~s~~~~~itG~~i~vdGG~~~~~  327 (328)
T 2qhx_A          275 PAVWEGHRSKVPLYQRDSSAA-EVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR  327 (328)
T ss_dssp             HHHHHHHHTTCTTTTSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHHHHHHHhhCCCCCCCCCHH-HHHHHHHHHhCccccCccCcEEEECCCcccCc
Confidence            23334455667888 888887 99999999999888999999999999987754

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=1.9e-44  Score=296.17  Aligned_cols=237  Identities=22%  Similarity=0.339  Sum_probs=203.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      +|++|||||++|||++++++|+++|++|+++++...  +..+++        .+.++.+|+++ +  +++++++++.+.+
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~--~~~~~~--------~~~~~~~D~~~-~--~~~~~~~~~~~~~   68 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPE--EAAQSL--------GAVPLPTDLEK-D--DPKGLVKRALEAL   68 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH--HHHHHH--------TCEEEECCTTT-S--CHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH--HHHHhh--------CcEEEecCCch-H--HHHHHHHHHHHHc
Confidence            689999999999999999999999999999994322  123332        26788999999 8  8999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHH
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA  164 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~  164 (266)
                      +++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.++|+|.+++ .++||++||..+..+...++...|++
T Consensus        69 g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~Y~~  146 (239)
T 2ekp_A           69 GGLHVLVHAAAVN-VRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFTAGGPVPIPAYTT  146 (239)
T ss_dssp             TSCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTSCCHHHHH
T ss_pred             CCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhccCCCCCCCccHHH
Confidence            9999999999984 556778899999999999999999999999999998776 69999999998876521278899999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCcc
Q 024517          165 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM  244 (266)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  244 (266)
                      +|++++.|+++++.|++++||++|+|+||++.|++.......++.........|.+++.+|+ |+|+.+++|+++..+++
T Consensus       147 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dvA~~~~~l~s~~~~~~  225 (239)
T 2ekp_A          147 AKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPE-EIARVAAVLCGDEAEYL  225 (239)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHH-HHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCchhcCC
Confidence            99999999999999999999999999999999998654321233334455667888888887 99999999999888999


Q ss_pred             cccEEEEcCCccc
Q 024517          245 TGTTIYVDGAQSI  257 (266)
Q Consensus       245 ~G~~i~~dgG~~~  257 (266)
                      +|+.+.+|||.+.
T Consensus       226 tG~~~~vdgG~~~  238 (239)
T 2ekp_A          226 TGQAVAVDGGFLA  238 (239)
T ss_dssp             CSCEEEESTTTTT
T ss_pred             CCCEEEECCCccc
Confidence            9999999999754

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=2.8e-44  Score=298.40  Aligned_cols=248  Identities=25%  Similarity=0.322  Sum_probs=214.1

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||++++++|+++|++|++++ +.++.++..+++...   +.++.++.+|++|.+  ++++++++
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~--~~~~~~~~   83 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME---GHDVSSVVMDVTNTE--SVQNAVRS   83 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHH--HHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEEecCCCHH--HHHHHHHH
Confidence            467899999999999999999999999999999999 556666666666543   357999999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||......++.+.+.++|+..+++|+.+++.+++.+.|+|.+++ .++||++||..+..+  .+..
T Consensus        84 ~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~--~~~~  160 (260)
T 3awd_A           84 VHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIV--NRPQ  160 (260)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC--CSSS
T ss_pred             HHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhccc--CCCC
Confidence            9999999999999999854356778889999999999999999999999999998766 689999999988765  3445


Q ss_pred             --hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          160 --AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       160 --~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                        ..|+++|++++.|++.++.|+++.||+++.|+||++.|++.......+.....+....|.+++.+|+ |+|+.+.+|+
T Consensus       161 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~  239 (260)
T 3awd_A          161 QQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPD-EVASVVQFLA  239 (260)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHH-HHHHHHHHHH
T ss_pred             CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHH-HHHHHHHHHh
Confidence              8999999999999999999999999999999999999998762222233444455567888888887 9999999999


Q ss_pred             cCCCCcccccEEEEcCCccc
Q 024517          238 SDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       238 s~~~~~~~G~~i~~dgG~~~  257 (266)
                      ++...+++|+.+.+|||.+.
T Consensus       240 ~~~~~~~~G~~~~v~gg~~~  259 (260)
T 3awd_A          240 SDAASLMTGAIVNVDAGFTV  259 (260)
T ss_dssp             SGGGTTCCSCEEEESTTTTT
T ss_pred             CchhccCCCcEEEECCceec
Confidence            98788999999999999765

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.8e-45  Score=302.07  Aligned_cols=243  Identities=19%  Similarity=0.219  Sum_probs=197.3

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++|++|||||++|||+++|++|+++|++|++++ +.++++++.+++...   +.++.++.+|+++.+  +++++++++.
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~d~~--~v~~~~~~~~   76 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA---GGTALAQVLDVTDRH--SVAAFAQAAV   76 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT---TCEEEEEECCTTCHH--HHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEcCCCCHH--HHHHHHHHHH
Confidence            4789999999999999999999999999999999 777778888887654   468899999999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.+|++|++|||||. ....++.+.+.++|+.++++|+.+++.+++.++|+|++++ .|+||++||..+..+  .++...
T Consensus        77 ~~~g~iD~lVnnAG~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~--~~~~~~  152 (264)
T 3tfo_A           77 DTWGRIDVLVNNAGV-MPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGALSV--VPTAAV  152 (264)
T ss_dssp             HHHSCCCEEEECCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCC--CTTCHH
T ss_pred             HHcCCCCEEEECCCC-CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHccc--CCCChh
Confidence            999999999999998 4567888899999999999999999999999999998876 799999999998877  688999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCC
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS  241 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  241 (266)
                      |+++|++++.|+++++.|+ + |||||+|+||+|+|++.......... ... . .......+|+ |+|+.+++|+++..
T Consensus       153 Y~asKaal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~-~~~-~-~~~~~~~~pe-dvA~~v~~l~s~~~  226 (264)
T 3tfo_A          153 YCATKFAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETM-AAM-D-TYRAIALQPA-DIARAVRQVIEAPQ  226 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHC-S-SEEEEEEEECCC--------------------------CCCHH-HHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHH-HHH-H-hhhccCCCHH-HHHHHHHHHhcCCc
Confidence            9999999999999999998 4 99999999999999987654322111 111 0 0111235666 99999999999999


Q ss_pred             CcccccEEEEcCCccccCC
Q 024517          242 RYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       242 ~~~~G~~i~~dgG~~~~~~  260 (266)
                      .+.+|+.+..++|..+..+
T Consensus       227 ~~~~~~i~i~p~~~~~~~~  245 (264)
T 3tfo_A          227 SVDTTEITIRPTASGNAEN  245 (264)
T ss_dssp             TEEEEEEEEEECC------
T ss_pred             cCccceEEEecCccccccC
Confidence            9999999999999876544

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=1e-44  Score=299.11  Aligned_cols=234  Identities=23%  Similarity=0.304  Sum_probs=197.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||++++++|+++|++|++++ +.++.+              ....+.+|+++.+  +++++++++
T Consensus        12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~~D~~~~~--~~~~~~~~~   75 (247)
T 1uzm_A           12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK--------------GLFGVEVDVTDSD--AVDRAFTAV   75 (247)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT--------------TSEEEECCTTCHH--HHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH--------------HhcCeeccCCCHH--HHHHHHHHH
Confidence            57899999999999999999999999999999998 443332              1224889999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||||.. ...++.+.+.++|+.++++|+.+++.+++.++|+|++++ .++||++||..+..+  .++..
T Consensus        76 ~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~  151 (247)
T 1uzm_A           76 EEHQGPVEVLVSNAGLS-ADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWG--IGNQA  151 (247)
T ss_dssp             HHHHSSCSEEEEECSCC-C-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-------CCH
T ss_pred             HHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhccC--CCCCh
Confidence            99999999999999984 556777899999999999999999999999999998765 699999999988776  57889


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.|+++++.|++++||++|+|+||+++|++....  .+..........|.+++.+|+ |+|+.+++|+++.
T Consensus       152 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~~~-dvA~~~~~l~s~~  228 (247)
T 1uzm_A          152 NYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPA-EVAGVVSFLASED  228 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS--CHHHHHHHGGGCTTCSCBCHH-HHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc--CHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCcc
Confidence            9999999999999999999999999999999999999986542  223334445567888888887 9999999999988


Q ss_pred             CCcccccEEEEcCCcccc
Q 024517          241 SRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~~  258 (266)
                      .++++|+.+.+|||.++.
T Consensus       229 ~~~~~G~~i~vdgG~~~~  246 (247)
T 1uzm_A          229 ASYISGAVIPVDGGMGMG  246 (247)
T ss_dssp             GTTCCSCEEEESTTTTC-
T ss_pred             ccCCcCCEEEECCCcccC
Confidence            899999999999997653

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=1.1e-44  Score=304.50  Aligned_cols=243  Identities=21%  Similarity=0.307  Sum_probs=209.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.++++++.+++      +.++.++.+|+++.+  ++++++++
T Consensus        26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~~~~--~v~~~~~~   97 (281)
T 3ppi_A           26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL------GNRAEFVSTNVTSED--SVLAAIEA   97 (281)
T ss_dssp             GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------CTTEEEEECCTTCHH--HHHHHHHH
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh------CCceEEEEcCCCCHH--HHHHHHHH
Confidence            457899999999999999999999999999999999 666666666665      358999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCC-----CCCCHHHHHHHHHccchHHHHHHHHHHHHHhcc-----CCCCeEEEEeccc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDP-----LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES-----KAGGSIVFLTSII  149 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~g~iv~iss~~  149 (266)
                      + +.++++|++|||++......++     .+.+.++|++.+++|+.+++.+++.++|.|.+.     +..|+||++||..
T Consensus        98 ~-~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~  176 (281)
T 3ppi_A           98 A-NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIA  176 (281)
T ss_dssp             H-TTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGG
T ss_pred             H-HHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEeccc
Confidence            9 7889999999994432444433     367889999999999999999999999999762     2268999999999


Q ss_pred             ccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCC-CCCCCChhh
Q 024517          150 GAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPL-HRWLDVKND  228 (266)
Q Consensus       150 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d  228 (266)
                      +..+  .++...|+++|+|++.|+++++.|+++.||+||+|+||+|+|++....  .++....+....|. +++.+|+ |
T Consensus       177 ~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~~pe-d  251 (281)
T 3ppi_A          177 GYEG--QIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV--GEEALAKFAANIPFPKRLGTPD-E  251 (281)
T ss_dssp             GTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT--CHHHHHHHHHTCCSSSSCBCHH-H
T ss_pred             ccCC--CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc--cHHHHHHHHhcCCCCCCCCCHH-H
Confidence            9877  688999999999999999999999999999999999999999987654  34445556667777 7888887 9


Q ss_pred             HHHHHHHHccCCCCcccccEEEEcCCccccC
Q 024517          229 LASTVIYLISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       229 va~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      +|+.+++|+++  .+++|+.|.+|||.+++.
T Consensus       252 vA~~v~~l~s~--~~~tG~~i~vdGG~~~~p  280 (281)
T 3ppi_A          252 FADAAAFLLTN--GYINGEVMRLDGAQRFTP  280 (281)
T ss_dssp             HHHHHHHHHHC--SSCCSCEEEESTTCCCCC
T ss_pred             HHHHHHHHHcC--CCcCCcEEEECCCcccCC
Confidence            99999999985  699999999999988754

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=2.8e-45  Score=303.42  Aligned_cols=234  Identities=24%  Similarity=0.373  Sum_probs=195.9

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      +++++|++|||||++|||+++|++|+++|++|++++ +.+++              ..+.++.+|++|++  ++++++++
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--------------~~~~~~~~Dl~d~~--~v~~~~~~   80 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP--------------EGFLAVKCDITDTE--QVEQAYKE   80 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC--------------TTSEEEECCTTSHH--HHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh--------------ccceEEEecCCCHH--HHHHHHHH
Confidence            356799999999999999999999999999999998 43332              23678999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||.. ...++.+.+.++|+.++++|+.+++.++++++|.|.+++ .|+||++||..+..+  .++.
T Consensus        81 ~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~--~~~~  156 (253)
T 2nm0_A           81 IEETHGPVEVLIANAGVT-KDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGLLG--SAGQ  156 (253)
T ss_dssp             HHHHTCSCSEEEEECSCC-TTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCCCC--HHHH
T ss_pred             HHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCC--CCCc
Confidence            999999999999999984 556777888899999999999999999999999998766 699999999988665  4678


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|+++++.|+++.||++|+|+||+|+|++.....  +.....+....|.+++.+|+ |+|+.+++|+++
T Consensus       157 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~p~~~~~~p~-dvA~~i~~l~s~  233 (253)
T 2nm0_A          157 ANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLT--DEQRANIVSQVPLGRYARPE-EIAATVRFLASD  233 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-----------CHHHHHTTCTTCSCBCHH-HHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcC--HHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCc
Confidence            899999999999999999999999999999999999999875421  11223344567888888887 999999999998


Q ss_pred             CCCcccccEEEEcCCccc
Q 024517          240 GSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~  257 (266)
                      ..++++|+.+.+|||.++
T Consensus       234 ~~~~~tG~~i~vdGG~~~  251 (253)
T 2nm0_A          234 DASYITGAVIPVDGGLGM  251 (253)
T ss_dssp             GGTTCCSCEEEESTTTTC
T ss_pred             cccCCcCcEEEECCcccc
Confidence            889999999999999765

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=9.6e-45  Score=302.37  Aligned_cols=245  Identities=20%  Similarity=0.240  Sum_probs=207.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++.+|++|||||++|||+++|++|+++|++|+++++ .++++    ++.     ..++.++.+|++|.+  +++++++++
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~-----~~~~~~~~~Dv~d~~--~v~~~~~~~   81 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLK----ALN-----LPNTLCAQVDVTDKY--TFDTAITRA   81 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHH----TTC-----CTTEEEEECCTTCHH--HHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH----Hhh-----cCCceEEEecCCCHH--HHHHHHHHH
Confidence            367899999999999999999999999999999994 33222    111     247889999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.+|++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|+|++++ .|+||++||..+..+  .++..
T Consensus        82 ~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~~~--~~~~~  157 (266)
T 3p19_A           82 EKIYGPADAIVNNAGMM-LLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGKKT--FPDHA  157 (266)
T ss_dssp             HHHHCSEEEEEECCCCC-CCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSC--CTTCH
T ss_pred             HHHCCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhCCC--CCCCc
Confidence            99999999999999984 557888899999999999999999999999999998876 699999999998877  68899


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.|+++++.|++++|||||+|+||+|+|++..................|++++++|+ |+|+.++||++..
T Consensus       158 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pe-dvA~av~~l~~~~  236 (266)
T 3p19_A          158 AYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAAD-DVARAVLFAYQQP  236 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHH-HHHHHHHHHHHSC
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHH-HHHHHHHHHHcCC
Confidence            999999999999999999999999999999999999999876543222222222245788889988 9999999999999


Q ss_pred             CCcccccEEEEcCCccccCCCc
Q 024517          241 SRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      ...++++.+....+..+..++.
T Consensus       237 ~~~~~~~i~i~p~~~~~~~~~~  258 (266)
T 3p19_A          237 QNVCIREIALAPTKQQPKLAAA  258 (266)
T ss_dssp             TTEEEEEEEEEETTCCC-----
T ss_pred             CCccceeeEEecCCCCCccchh
Confidence            9999999998888877665553

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-44  Score=299.02  Aligned_cols=237  Identities=24%  Similarity=0.395  Sum_probs=193.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++.      .++.++.+|+++.+  ++++++++ 
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~--~~~~~~~~-   81 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK------DNYTIEVCNLANKE--ECSNLISK-   81 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------SSEEEEECCTTSHH--HHHHHHHT-
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc------cCccEEEcCCCCHH--HHHHHHHh-
Confidence            46899999999999999999999999999999999 6666666666653      47889999999988  88777754 


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                         ++++|++|||||.. ...++.+.+.++|+.++++|+.+++.+++.++|+|.+++ .|+||++||..+..+  .++..
T Consensus        82 ---~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~  154 (249)
T 3f9i_A           82 ---TSNLDILVCNAGIT-SDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGIAG--NPGQA  154 (249)
T ss_dssp             ---CSCCSEEEECCC--------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC--C--CSCSH
T ss_pred             ---cCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhccC--CCCCc
Confidence               47899999999984 445666788899999999999999999999999998776 699999999998877  68899


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.|+++++.|++++||++|+|+||+|.|++....  .+.....+....|.+++.+|+ |+|+.+++|+++.
T Consensus       155 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~s~~  231 (249)
T 3f9i_A          155 NYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL--NEKQREAIVQKIPLGTYGIPE-DVAYAVAFLASNN  231 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C--CHHHHHHHHHHCTTCSCBCHH-HHHHHHHHHHSGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc--CHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCCc
Confidence            9999999999999999999999999999999999999987664  344455566778999999987 9999999999998


Q ss_pred             CCcccccEEEEcCCccc
Q 024517          241 SRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~  257 (266)
                      .++++|+.+.+|||.++
T Consensus       232 ~~~~tG~~~~vdgG~~~  248 (249)
T 3f9i_A          232 ASYITGQTLHVNGGMLM  248 (249)
T ss_dssp             GTTCCSCEEEESTTSSC
T ss_pred             cCCccCcEEEECCCEee
Confidence            89999999999999875

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=2e-45  Score=302.83  Aligned_cols=232  Identities=23%  Similarity=0.339  Sum_probs=201.3

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHH-cCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAK-RGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .++|++|||||++|||+++|++|++ .|++|+++++.+...            ...+.++.+|+++.+  +++++++.+.
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~------------~~~~~~~~~Dv~~~~--~v~~~~~~~~   67 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS------------AENLKFIKADLTKQQ--DITNVLDIIK   67 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC------------CTTEEEEECCTTCHH--HHHHHHHHTT
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc------------cccceEEecCcCCHH--HHHHHHHHHH
Confidence            4789999999999999999999999 788999888433211            146789999999998  9999996554


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                        ++++|++|||||.. ...++.+.+.++|+.++++|+.+++++++++.|+|.+   .|+||++||..+..+  .++...
T Consensus        68 --~~~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~~sS~~~~~~--~~~~~~  139 (244)
T 4e4y_A           68 --NVSFDGIFLNAGIL-IKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKV---GASIVFNGSDQCFIA--KPNSFA  139 (244)
T ss_dssp             --TCCEEEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEE---EEEEEEECCGGGTCC--CTTBHH
T ss_pred             --hCCCCEEEECCccC-CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhcc---CcEEEEECCHHHccC--CCCCch
Confidence              78999999999984 4577888999999999999999999999999999876   479999999998877  688999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc---------HHHHHHHhhccCCCCCCCChhhHHHH
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ---------ERAVKLVREAAPLHRWLDVKNDLAST  232 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva~~  232 (266)
                      |+++|++++.|+++++.|++++|||||+|+||+|+|++.......         ++.........|.+++.+|+ |+|+.
T Consensus       140 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dvA~~  218 (244)
T 4e4y_A          140 YTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQ-EIAEL  218 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHH-HHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHH-HHHHH
Confidence            999999999999999999999999999999999999987654321         12445566788999999998 99999


Q ss_pred             HHHHccCCCCcccccEEEEcCCccc
Q 024517          233 VIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       233 ~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      ++||+++...++||+.|.+|||.+.
T Consensus       219 v~~l~s~~~~~itG~~i~vdGG~~~  243 (244)
T 4e4y_A          219 VIFLLSDKSKFMTGGLIPIDGGYTA  243 (244)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhcCccccccCCeEeECCCccC
Confidence            9999999899999999999999874

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=6.5e-45  Score=300.14  Aligned_cols=237  Identities=20%  Similarity=0.338  Sum_probs=199.7

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||++++++|+++|++|++++ +.++++++    . ..   .++.++.+|+++++  +++    ++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~----~-~~---~~~~~~~~D~~~~~--~~~----~~   68 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQEL----E-KY---PGIQTRVLDVTKKK--QID----QF   68 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGG----G-GS---TTEEEEECCTTCHH--HHH----HH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----H-hc---cCceEEEeeCCCHH--HHH----HH
Confidence            57899999999999999999999999999999998 43333222    2 11   37889999999988  776    44


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCC-Cc
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP-GA  159 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~-~~  159 (266)
                      .+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.++++++|+|.+++ .|+||++||..+..+  .+ +.
T Consensus        69 ~~~~~~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~  144 (246)
T 2ag5_A           69 ANEVERLDVLFNVAGFV-HHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVK--GVVNR  144 (246)
T ss_dssp             HHHCSCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTB--CCTTB
T ss_pred             HHHhCCCCEEEECCccC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhCcC--CCCCC
Confidence            55678999999999984 446777889999999999999999999999999998776 699999999988766  35 88


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----cHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      ..|+++|++++.|+++++.|++++||++|+|+||+++|++......    .+.....+....|.+++.+|+ |+|+.+++
T Consensus       145 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dvA~~v~~  223 (246)
T 2ag5_A          145 CVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAE-EIAMLCVY  223 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHH-HHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHH-HHHHHHHH
Confidence            9999999999999999999999999999999999999997643211    122333445567888888887 99999999


Q ss_pred             HccCCCCcccccEEEEcCCccc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      |+++..++++|+.+.+|||.++
T Consensus       224 l~s~~~~~~tG~~i~vdgG~~~  245 (246)
T 2ag5_A          224 LASDESAYVTGNPVIIDGGWSL  245 (246)
T ss_dssp             HHSGGGTTCCSCEEEECTTGGG
T ss_pred             HhCccccCCCCCEEEECCCccC
Confidence            9999889999999999999764

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.8e-44  Score=309.66  Aligned_cols=234  Identities=18%  Similarity=0.232  Sum_probs=204.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccc-------cHHHHHHHhcccCCCCCeEEEEEecCCCchHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERR-------LSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAF   73 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v   73 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.++       +++..+++...   +.++.++.+|++|.+  ++
T Consensus        42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~---g~~~~~~~~Dv~d~~--~v  116 (346)
T 3kvo_A           42 RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV---GGKALPCIVDVRDEQ--QI  116 (346)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT---TCEEEEEECCTTCHH--HH
T ss_pred             CCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc---CCeEEEEEccCCCHH--HH
Confidence            57899999999999999999999999999999999 5443       44566666543   468999999999999  99


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc
Q 024517           74 DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER  153 (266)
Q Consensus        74 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~  153 (266)
                      +++++++.+.+|+||+||||||.. ...++.+.+.++|+.++++|+.+++.++++++|+|++++ .|+||++||..+..+
T Consensus       117 ~~~~~~~~~~~g~iDilVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~~~~~~  194 (346)
T 3kvo_A          117 SAAVEKAIKKFGGIDILVNNASAI-SLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPPLNLNP  194 (346)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEECCCCCCCG
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHcCC
Confidence            999999999999999999999984 557888899999999999999999999999999998876 799999999988765


Q ss_pred             CCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCc-ccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHH
Q 024517          154 GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL-HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAST  232 (266)
Q Consensus       154 ~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  232 (266)
                      ...++...|+++|++++.|+++++.|++ .||+||+|+||+ +.|++...          +....|.+++.+|+ |+|+.
T Consensus       195 ~~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~----------~~~~~~~~r~~~pe-dvA~~  262 (346)
T 3kvo_A          195 VWFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDM----------LGGPGIESQCRKVD-IIADA  262 (346)
T ss_dssp             GGTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHH----------HCC--CGGGCBCTH-HHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHh----------hccccccccCCCHH-HHHHH
Confidence            4357889999999999999999999999 899999999995 88876432          22334667788888 99999


Q ss_pred             HHHHccCCCCcccccEEEEcCCcc
Q 024517          233 VIYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       233 ~~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      +++|+++ .+++||+++ +|||..
T Consensus       263 v~~L~s~-~~~itG~~i-vdgg~~  284 (346)
T 3kvo_A          263 AYSIFQK-PKSFTGNFV-IDENIL  284 (346)
T ss_dssp             HHHHHTS-CTTCCSCEE-EHHHHH
T ss_pred             HHHHHhc-CCCCCceEE-ECCcEe
Confidence            9999999 899999998 999954

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=8.1e-45  Score=310.89  Aligned_cols=242  Identities=19%  Similarity=0.267  Sum_probs=207.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-c----------ccccHHHHHHHhcccCCCCCeEEEEEecCCCch
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-N----------ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDRE   70 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~----------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   70 (266)
                      .+++|++|||||++|||+++|++|+++|++|++++ +          .+..++..+++...   +.++.++.+|++|.+ 
T Consensus        24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~-   99 (322)
T 3qlj_A           24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA---GGEAVADGSNVADWD-   99 (322)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT---TCEEEEECCCTTSHH-
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc---CCcEEEEECCCCCHH-
Confidence            36899999999999999999999999999999998 4          45667777777654   468899999999999 


Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC-----CCCeEEEE
Q 024517           71 GAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK-----AGGSIVFL  145 (266)
Q Consensus        71 ~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~g~iv~i  145 (266)
                       +++++++++.+.+|+||+||||||.. ...++.+.+.++|+.++++|+.+++.+++.+.|+|.+.+     .+|+||++
T Consensus       100 -~v~~~~~~~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~i  177 (322)
T 3qlj_A          100 -QAAGLIQTAVETFGGLDVLVNNAGIV-RDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINT  177 (322)
T ss_dssp             -HHHHHHHHHHHHHSCCCEEECCCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             -HHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEE
Confidence             99999999999999999999999984 556788899999999999999999999999999987532     13799999


Q ss_pred             ecccccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCC
Q 024517          146 TSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDV  225 (266)
Q Consensus       146 ss~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (266)
                      ||..+..+  .++...|+++|+|++.|+++++.|++++|||||+|+|| +.|++..........     ...+..+..+|
T Consensus       178 sS~~~~~~--~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~-----~~~~~~~~~~p  249 (322)
T 3qlj_A          178 SSGAGLQG--SVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMA-----TQDQDFDAMAP  249 (322)
T ss_dssp             CCHHHHHC--BTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC-------------CCTTCG
T ss_pred             cCHHHccC--CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhh-----ccccccCCCCH
Confidence            99998877  58899999999999999999999999999999999999 999988665432211     11122234567


Q ss_pred             hhhHHHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          226 KNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       226 ~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      + |+|+.++||+++.++++||+.|.+|||....
T Consensus       250 e-dva~~v~~L~s~~~~~itG~~i~vdGG~~~~  281 (322)
T 3qlj_A          250 E-NVSPLVVWLGSAEARDVTGKVFEVEGGKIRV  281 (322)
T ss_dssp             G-GTHHHHHHHTSGGGGGCCSCEEEEETTEEEE
T ss_pred             H-HHHHHHHHHhCccccCCCCCEEEECCCcccc
Confidence            6 9999999999999999999999999998774

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=2.2e-44  Score=300.19  Aligned_cols=247  Identities=23%  Similarity=0.315  Sum_probs=189.5

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||++++++|+++|++|++++ +.+++++..+++...   +.++.++.+|+++.+  ++++++++
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~   84 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK---GFQVTGSVCDASLRP--EREKLMQT   84 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTSHH--HHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeeEEEECCCCCHH--HHHHHHHH
Confidence            568899999999999999999999999999999999 556666666666543   357899999999998  99999999


Q ss_pred             HHHHh-CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           80 ACQIL-GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        80 ~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      +.+.+ +++|++|||||.. ...++.+.+.++|+..+++|+.+++.++++++|.|++.+ .++||++||..+..+  .+.
T Consensus        85 ~~~~~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~--~~~  160 (266)
T 1xq1_A           85 VSSMFGGKLDILINNLGAI-RSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVS--ASV  160 (266)
T ss_dssp             HHHHHTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC------------
T ss_pred             HHHHhCCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhccC--CCC
Confidence            99999 8999999999983 556777889999999999999999999999999998766 689999999988766  577


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ...|+++|++++.|+++++.+++++||++|+|+||++.|++..... .+..........|.+++++|+ |+|+.+.+|++
T Consensus       161 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~  238 (266)
T 1xq1_A          161 GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY-DDEFKKVVISRKPLGRFGEPE-EVSSLVAFLCM  238 (266)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------CCGG-GGHHHHHHHTS
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc-CHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcC
Confidence            8899999999999999999999999999999999999999876533 222333344556778888888 99999999999


Q ss_pred             CCCCcccccEEEEcCCcccc
Q 024517          239 DGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~~~  258 (266)
                      +...+++|+.+.+|||.++.
T Consensus       239 ~~~~~~~G~~~~v~gG~~~~  258 (266)
T 1xq1_A          239 PAASYITGQTICVDGGLTVN  258 (266)
T ss_dssp             GGGTTCCSCEEECCCCEEET
T ss_pred             ccccCccCcEEEEcCCcccc
Confidence            88889999999999998764

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.1e-43  Score=293.14  Aligned_cols=244  Identities=19%  Similarity=0.293  Sum_probs=210.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +|++|||||++|||++++++|+++|++|++++ +.+++++..+++....  +.++.++.+|+++++  +++++++++.+.
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~--~~~~~~~~~~~~   77 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY--ADKVLRVRADVADEG--DVNAAIAATMEQ   77 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT--GGGEEEEECCTTCHH--HHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc--CCcEEEEEecCCCHH--HHHHHHHHHHHH
Confidence            68999999999999999999999999999999 5556666665552211  257899999999998  999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCC---CCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           84 LGNLDAFVHCYTYEGKMQD---PLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      ++++|++|||||.. ...+   +.+.+.++|+..+++|+.+++.+++.++|.|.+++ .++||++||..+..+  .++..
T Consensus        78 ~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~--~~~~~  153 (250)
T 2cfc_A           78 FGAIDVLVNNAGIT-GNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLVA--FPGRS  153 (250)
T ss_dssp             HSCCCEEEECCCCC-CCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC--CTTCH
T ss_pred             hCCCCEEEECCCCC-CCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccC--CCCch
Confidence            99999999999974 3344   67788999999999999999999999999998766 689999999988766  57889


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.|+++++.|+.++||+++.|+||++.|++.......+.....+....|.+++++|+ |+|+.+++|+++.
T Consensus       154 ~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~  232 (250)
T 2cfc_A          154 AYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAA-QVADAVMFLAGED  232 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHH-HHHHHHHHHHSTT
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCch
Confidence            999999999999999999999999999999999999998765222333444455667888888887 9999999999988


Q ss_pred             CCcccccEEEEcCCccc
Q 024517          241 SRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~  257 (266)
                      ..+++|+.+.+|||.+.
T Consensus       233 ~~~~~G~~~~v~gG~~~  249 (250)
T 2cfc_A          233 ATYVNGAALVMDGAYTA  249 (250)
T ss_dssp             CTTCCSCEEEESTTGGG
T ss_pred             hhcccCCEEEECCceec
Confidence            88999999999999753

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=7.8e-44  Score=294.76  Aligned_cols=243  Identities=22%  Similarity=0.353  Sum_probs=209.6

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCe-EEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPV-EVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |++++|++|||||++|||++++++|+++|++|++++ +.+++++..+++.      .++ .++.+|+++.+  +++++++
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~~D~~~~~--~~~~~~~   78 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG------AAVAARIVADVTDAE--AMTAAAA   78 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG------GGEEEEEECCTTCHH--HHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------ccceeEEEEecCCHH--HHHHHHH
Confidence            567899999999999999999999999999999999 5555555555542      356 88999999998  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++.+ ++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.++|.|.+++ .++||++||..+..+  .+.
T Consensus        79 ~~~~-~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~--~~~  153 (254)
T 2wsb_A           79 EAEA-VAPVSILVNSAGIA-RLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTIV--NRP  153 (254)
T ss_dssp             HHHH-HSCCCEEEECCCCC-CCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC--CSS
T ss_pred             HHHh-hCCCcEEEECCccC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhccC--CCC
Confidence            9988 89999999999984 446777889999999999999999999999999998876 699999999988765  355


Q ss_pred             c--hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          159 A--AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       159 ~--~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      .  ..|+++|++++.+++.++.+++++||+++.|+||++.|++.......+.....+....|.+++.+|+ |+|+.+++|
T Consensus       154 ~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l  232 (254)
T 2wsb_A          154 QFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPS-EIAAAALFL  232 (254)
T ss_dssp             SCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHH-HHHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHH-HHHHHHHHH
Confidence            5  8999999999999999999999999999999999999998754332233444455567888888887 999999999


Q ss_pred             ccCCCCcccccEEEEcCCccc
Q 024517          237 ISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +++...+++|+.+.+|||.+.
T Consensus       233 ~~~~~~~~~G~~~~v~gG~~~  253 (254)
T 2wsb_A          233 ASPAASYVTGAILAVDGGYTV  253 (254)
T ss_dssp             HSGGGTTCCSCEEEESTTGGG
T ss_pred             hCcccccccCCEEEECCCEec
Confidence            998888999999999999764

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=3.6e-44  Score=295.56  Aligned_cols=244  Identities=26%  Similarity=0.412  Sum_probs=193.7

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe--cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG--NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |++++|++|||||++|||++++++|+++|++|++++  +.+..++..+++...   +.++.++.+|++|++  +++++++
T Consensus         1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~   75 (247)
T 2hq1_A            1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA---GINVVVAKGDVKNPE--DVENMVK   75 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT---TCCEEEEESCTTSHH--HHHHHHH
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc---CCcEEEEECCCCCHH--HHHHHHH
Confidence            889999999999999999999999999999999984  445566666666543   357899999999998  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++.+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.++|.|.+++ .++||++||..+..+  .+.
T Consensus        76 ~~~~~~~~~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~--~~~  151 (247)
T 2hq1_A           76 TAMDAFGRIDILVNNAGIT-RDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGIIG--NAG  151 (247)
T ss_dssp             HHHHHHSCCCEEEECC----------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC-----------
T ss_pred             HHHHhcCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccC--CCC
Confidence            9999999999999999984 445667778899999999999999999999999998766 689999999988776  578


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ...|+++|++++.|+++++.|+++.||++|.|+||++.|++....  .+.....+....|.+++.+++ |+|+.+.+|++
T Consensus       152 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~  228 (247)
T 2hq1_A          152 QANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL--PDKVKEMYLNNIPLKRFGTPE-EVANVVGFLAS  228 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHTTSTTSSCBCHH-HHHHHHHHHHS
T ss_pred             CcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc--chHHHHHHHhhCCCCCCCCHH-HHHHHHHHHcC
Confidence            899999999999999999999999999999999999999876542  233334444566888888887 99999999999


Q ss_pred             CCCCcccccEEEEcCCcc
Q 024517          239 DGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~  256 (266)
                      +...+++|+.+.+|||.+
T Consensus       229 ~~~~~~~G~~~~v~gG~~  246 (247)
T 2hq1_A          229 DDSNYITGQVINIDGGLV  246 (247)
T ss_dssp             GGGTTCCSCEEEESTTC-
T ss_pred             cccccccCcEEEeCCCcc
Confidence            877899999999999975

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=2e-45  Score=315.57  Aligned_cols=249  Identities=22%  Similarity=0.256  Sum_probs=204.6

Q ss_pred             CCcEEEEecCCC--chHHHHHHHHHHcCCeEEEEeccc----------ccHHHHHHHhcccCCCCCeEEEEEecCCCchH
Q 024517            4 QAKRVLLTSDGD--EISKNIAFHLAKRGCRLVLVGNER----------RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREG   71 (266)
Q Consensus         4 ~~k~vlItGa~~--giG~~ia~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   71 (266)
                      ++|++|||||++  |||+++|++|+++|++|+++++.+          +.+...+.+.........+.++.+|+++...+
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999986  999999999999999999776322          11111111111111123478888898876323


Q ss_pred             ------------------HHHHHHHHHHHHhCCCCEEEEcCCCC-CCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHH
Q 024517           72 ------------------AFDEAVDKACQILGNLDAFVHCYTYE-GKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR  132 (266)
Q Consensus        72 ------------------~v~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  132 (266)
                                        +++++++++.+.+|+||++|||||+. ....++.+.+.++|+.++++|+.+++.++++++|+
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              78999999999999999999999973 24577888999999999999999999999999999


Q ss_pred             HhccCCCCeEEEEecccccccCCCCCch-hhHHhHHHHHHHHHHHHHHhCC-CCcEEEEEecCcccCCCccccccc----
Q 024517          133 MKESKAGGSIVFLTSIIGAERGLYPGAA-AYGACAASIHQLVRTAAMEIGK-HKIRVNGIARGLHLQDEYPIAVGQ----  206 (266)
Q Consensus       133 ~~~~~~~g~iv~iss~~~~~~~~~~~~~-~y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~pG~v~t~~~~~~~~~----  206 (266)
                      |++   .|+||++||..+..+  .++.. .|++||+|+.+|+++++.|+++ +|||||+|+||+|+|++.......    
T Consensus       161 m~~---~g~Iv~isS~~~~~~--~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~  235 (329)
T 3lt0_A          161 MKP---QSSIISLTYHASQKV--VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTY  235 (329)
T ss_dssp             EEE---EEEEEEEECGGGTSC--CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC------
T ss_pred             Hhh---CCeEEEEeCccccCC--CCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhcccc
Confidence            987   389999999998877  57775 9999999999999999999998 899999999999999987654210    


Q ss_pred             ---------------------------------------HHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCccccc
Q 024517          207 ---------------------------------------ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGT  247 (266)
Q Consensus       207 ---------------------------------------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  247 (266)
                                                             ++.........|++|+++|+ |+|+.++||+|+.++++||+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-evA~~v~fL~s~~a~~itG~  314 (329)
T 3lt0_A          236 ENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLST-DIGSVASFLLSRESRAITGQ  314 (329)
T ss_dssp             ------------------------------------CHHHHHHHHHHHHSSSCSCCCHH-HHHHHHHHHHSGGGTTCCSC
T ss_pred             cccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHH-HHHHHHHHHhCchhccccCc
Confidence                                                   01244556788999999998 99999999999999999999


Q ss_pred             EEEEcCCcccc
Q 024517          248 TIYVDGAQSIT  258 (266)
Q Consensus       248 ~i~~dgG~~~~  258 (266)
                      .|.+|||.++.
T Consensus       315 ~i~vdGG~~~~  325 (329)
T 3lt0_A          315 TIYVDNGLNIM  325 (329)
T ss_dssp             EEEESTTGGGC
T ss_pred             EEEEcCCeeEE
Confidence            99999999875

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=1.7e-43  Score=296.80  Aligned_cols=247  Identities=19%  Similarity=0.258  Sum_probs=210.5

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||++++++|+++|++|++++ +.+..++..+.+...   +.++.++.+|+++.+  ++++++++
T Consensus        30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~--~~~~~~~~  104 (279)
T 3ctm_A           30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY---GVHSKAYKCNISDPK--SVEETISQ  104 (279)
T ss_dssp             GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH---CSCEEEEECCTTCHH--HHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcceEEEeecCCHH--HHHHHHHH
Confidence            568899999999999999999999999999999999 556666666655433   357899999999988  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCC-CCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPL-QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      +.+.++++|++|||||......++. +.+.++|+..+++|+.+++.+++.++|.|.+++ .++||++||..+..+...++
T Consensus       105 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~  183 (279)
T 3ctm_A          105 QEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKIVNIPQL  183 (279)
T ss_dssp             HHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSCC---CC
T ss_pred             HHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhccCCCCCC
Confidence            9999999999999999853325566 778899999999999999999999999998766 69999999998765422367


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ...|+++|++++.|+++++.|+++.+ ++|+|+||+++|++....  .......+....|.+++.+|+ |+|+.+++|++
T Consensus       184 ~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~~~-dvA~~~~~l~s  259 (279)
T 3ctm_A          184 QAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA--SKDMKAKWWQLTPLGREGLTQ-ELVGGYLYLAS  259 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC--CHHHHHHHHHHSTTCSCBCGG-GTHHHHHHHHS
T ss_pred             cccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc--ChHHHHHHHHhCCccCCcCHH-HHHHHHHHHhC
Confidence            88999999999999999999999999 999999999999987532  233334444667888889988 99999999999


Q ss_pred             CCCCcccccEEEEcCCccc
Q 024517          239 DGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~~  257 (266)
                      +..++++|+.+.+|||.++
T Consensus       260 ~~~~~~tG~~i~vdgG~~~  278 (279)
T 3ctm_A          260 NASTFTTGSDVVIDGGYTC  278 (279)
T ss_dssp             GGGTTCCSCEEEESTTCCC
T ss_pred             ccccCccCCEEEECCCeec
Confidence            8888999999999999764

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=1.5e-43  Score=294.29  Aligned_cols=248  Identities=19%  Similarity=0.286  Sum_probs=212.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-c-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-E-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++++|++|||||++|||++++++|+++|++|+++++ . +..++..+++...   +.++.++.+|+++.+  ++++++++
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~--~~~~~~~~   78 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV---GGEAIAVKGDVTVES--DVINLVQS   78 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCEEEEEECCTTSHH--HHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc---CCceEEEECCCCCHH--HHHHHHHH
Confidence            478999999999999999999999999999999885 4 3445555555433   357889999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.++|.|.+++..++||++||..+..+  .++.
T Consensus        79 ~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~  155 (261)
T 1gee_A           79 AIKEFGKLDVMINNAGLE-NPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP--WPLF  155 (261)
T ss_dssp             HHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC--CTTC
T ss_pred             HHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC--CCCc
Confidence            999999999999999984 4466778899999999999999999999999999987543489999999988766  5888


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|++.++.++++.||+++.|+||++.|++.......+.....+....|.+++.+|+ |+|+.+++|+++
T Consensus       156 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~  234 (261)
T 1gee_A          156 VHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPE-EIAAVAAWLASS  234 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHH-HHHHHHHHHHSG
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCc
Confidence            9999999999999999999999999999999999999998754322233334444567888888887 999999999998


Q ss_pred             CCCcccccEEEEcCCcccc
Q 024517          240 GSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~  258 (266)
                      ...+++|+.+.+|||.++.
T Consensus       235 ~~~~~~G~~~~v~gg~~~~  253 (261)
T 1gee_A          235 EASYVTGITLFADGGMTLY  253 (261)
T ss_dssp             GGTTCCSCEEEESTTGGGC
T ss_pred             cccCCCCcEEEEcCCcccC
Confidence            7889999999999998764

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-43  Score=298.40  Aligned_cols=244  Identities=23%  Similarity=0.347  Sum_probs=210.6

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||++++++|+++|++|++++ +.+++++..+++...   +.++.++.+|++|.+  ++++++++
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~d~~--~v~~~~~~  114 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF---GYESSGYAGDVSKKE--EISEVINK  114 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT---TCCEEEEECCTTCHH--HHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc---CCceeEEECCCCCHH--HHHHHHHH
Confidence            457899999999999999999999999999999988 556666666666543   357899999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.++|.|.+.+ .++||++||..+..+  .++.
T Consensus       115 ~~~~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~--~~~~  190 (285)
T 2c07_A          115 ILTEHKNVDILVNNAGIT-RDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTG--NVGQ  190 (285)
T ss_dssp             HHHHCSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHC--CTTC
T ss_pred             HHHhcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccC--CCCC
Confidence            999999999999999984 556778889999999999999999999999999998765 689999999988776  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|+++++.|+.+.||++|+|+||+++|++....  .+..........|.+++.+|+ |+|+.+++|+++
T Consensus       191 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~-dvA~~~~~l~~~  267 (285)
T 2c07_A          191 ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPE-EVANLACFLSSD  267 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C--CHHHHHHHHTTCTTSSCBCHH-HHHHHHHHHHSG
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhc--CHHHHHHHHhhCCCCCCCCHH-HHHHHHHHHhCC
Confidence            99999999999999999999999999999999999999987543  233344445567888888887 999999999998


Q ss_pred             CCCcccccEEEEcCCcc
Q 024517          240 GSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~  256 (266)
                      ..++++|+.+.+|||.+
T Consensus       268 ~~~~~~G~~i~v~gG~~  284 (285)
T 2c07_A          268 KSGYINGRVFVIDGGLS  284 (285)
T ss_dssp             GGTTCCSCEEEESTTSC
T ss_pred             CcCCCCCCEEEeCCCcc
Confidence            88899999999999975

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=1.4e-43  Score=294.84  Aligned_cols=235  Identities=21%  Similarity=0.265  Sum_probs=200.5

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++...   +.++.++.+|+++.+  +++++++++
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~v~~~~~~~  100 (262)
T 3rkr_A           26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA---GGEAESHACDLSHSD--AIAAFATGV  100 (262)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCEEEEEECCTTCHH--HHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh---CCceeEEEecCCCHH--HHHHHHHHH
Confidence            47899999999999999999999999999999999 667777777777654   468999999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||||......++.+.+.++|+.++++|+.+++.+++.++|+|.+++ .|+||++||..+..+  .++..
T Consensus       101 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~  177 (262)
T 3rkr_A          101 LAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGKNP--VADGA  177 (262)
T ss_dssp             HHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSSCC--CTTCH
T ss_pred             HHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhcCC--CCCCc
Confidence            999999999999999854556788899999999999999999999999999998776 799999999998877  68899


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.|+++++.|+++.||+||+|+||+|+|++.....          ...+..++.+|+ |+|+.+++|+++.
T Consensus       178 ~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----------~~~~~~~~~~p~-dvA~~v~~l~s~~  246 (262)
T 3rkr_A          178 AYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS----------AKKSALGAIEPD-DIADVVALLATQA  246 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------CCCHH-HHHHHHHHHHTCC
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc----------cccccccCCCHH-HHHHHHHHHhcCc
Confidence            99999999999999999999999999999999999999865432          123445667777 9999999999999


Q ss_pred             CCcccccEEEEcCCc
Q 024517          241 SRYMTGTTIYVDGAQ  255 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~  255 (266)
                      ..+++|+.+..+.+.
T Consensus       247 ~~~~~g~~~i~p~~~  261 (262)
T 3rkr_A          247 DQSFISEVLVRPTLK  261 (262)
T ss_dssp             TTCCEEEEEEECCCC
T ss_pred             cccccCcEEeccccC
Confidence            999999999888763

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-43  Score=295.16  Aligned_cols=249  Identities=19%  Similarity=0.285  Sum_probs=212.4

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||++++++|+++|++|++++ +.++.++..+++.+..  +.++.++.+|++|.+  ++++++++
T Consensus        10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~--~~~~~~~~   85 (265)
T 1h5q_A           10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF--GVKTKAYQCDVSNTD--IVTKTIQQ   85 (265)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH--TCCEEEEECCTTCHH--HHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc--CCeeEEEEeeCCCHH--HHHHHHHH
Confidence            567899999999999999999999999999999999 4666655555554332  257899999999988  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC----
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL----  155 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~----  155 (266)
                      +.+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.+.|.|.+++..++||++||..+..+..    
T Consensus        86 ~~~~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  164 (265)
T 1h5q_A           86 IDADLGPISGLIANAGVS-VVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLN  164 (265)
T ss_dssp             HHHHSCSEEEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETT
T ss_pred             HHHhcCCCCEEEECCCcC-CCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccccc
Confidence            999999999999999984 456777889999999999999999999999999998765348999999988765421    


Q ss_pred             -CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHH
Q 024517          156 -YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI  234 (266)
Q Consensus       156 -~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (266)
                       ..+...|+++|++++.|++.++.|+++.||+++.|+||+|.|++....  .+..........|.+++.+|+ |+|+.++
T Consensus       165 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~-dva~~~~  241 (265)
T 1h5q_A          165 GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPE-EMTGQAI  241 (265)
T ss_dssp             EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCGG-GGHHHHH
T ss_pred             ccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc--chhHHHHHHhcCcccCCCCHH-HHHHHHH
Confidence             012789999999999999999999999999999999999999987653  233334445667888888887 9999999


Q ss_pred             HHccCCCCcccccEEEEcCCccc
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +|+++..++++|+.+.+|||.++
T Consensus       242 ~l~~~~~~~~~G~~~~v~gG~~~  264 (265)
T 1h5q_A          242 LLLSDHATYMTGGEYFIDGGQLI  264 (265)
T ss_dssp             HHHSGGGTTCCSCEEEECTTGGG
T ss_pred             hhccCchhcCcCcEEEecCCEeC
Confidence            99998888999999999999865

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=6.5e-44  Score=298.24  Aligned_cols=239  Identities=19%  Similarity=0.212  Sum_probs=188.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++.      .++.++.+|++|.+  +++++++++.
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~d~~--~v~~~~~~~~   97 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG------DDALCVPTDVTDPD--SVRALFTATV   97 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT------SCCEEEECCTTSHH--HHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC------CCeEEEEecCCCHH--HHHHHHHHHH
Confidence            5789999999999999999999999999999999 6666666666652      57899999999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC-CCCeEEEEecccccccCCCCCch
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK-AGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      +.+|++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|.+++ ++|+||++||..+..+  .++..
T Consensus        98 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~--~~~~~  175 (272)
T 4dyv_A           98 EKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSP--RPYSA  175 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSC--CTTCH
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCC--CCCch
Confidence            99999999999999855556788899999999999999999999999999998764 2589999999998877  68899


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.|+++++.|++++|||||+|+||+|+|++.......   ........|.+++.+|+ |+|++++||++..
T Consensus       176 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~~~~~pe-dvA~~v~fL~s~~  251 (272)
T 4dyv_A          176 PYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAG---VPQADLSIKVEPVMDVA-HVASAVVYMASLP  251 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC---------------------------CHH-HHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhccc---chhhhhcccccCCCCHH-HHHHHHHHHhCCC
Confidence            9999999999999999999999999999999999999987654321   11222345677888887 9999999999976


Q ss_pred             CCcccccEEEEcCCc
Q 024517          241 SRYMTGTTIYVDGAQ  255 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~  255 (266)
                      .....++.....++.
T Consensus       252 ~~~~~~~i~i~~~~~  266 (272)
T 4dyv_A          252 LDANVQFMTIMATKM  266 (272)
T ss_dssp             TTSCCCEEEEEEC--
T ss_pred             CcCccceEEEeccCc
Confidence            665555555444443

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=2.5e-43  Score=290.83  Aligned_cols=237  Identities=20%  Similarity=0.304  Sum_probs=202.6

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.++++++.+++...   +.++.++.+|+++++  +++++++++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~~~~--~~~~~~~~~   78 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA---GAKVHVLELDVADRQ--GVDAAVAST   78 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHH--HHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEECCCCCHH--HHHHHHHHH
Confidence            47899999999999999999999999999999999 666777777777543   357899999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||||.. ...++.+.+.++|+.++++|+.+++.++++++|+|.+++  |+||++||..+..+  .++..
T Consensus        79 ~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~--~~~~~  153 (247)
T 2jah_A           79 VEALGGLDILVNNAGIM-LLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK--GTVVQMSSIAGRVN--VRNAA  153 (247)
T ss_dssp             HHHHSCCSEEEECCCCC-CCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTCC--CTTCH
T ss_pred             HHHcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC--CEEEEEccHHhcCC--CCCCc
Confidence            99999999999999984 556788899999999999999999999999999998764  89999999988776  58889


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCC--CCChhhHHHHHHHHcc
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRW--LDVKNDLASTVIYLIS  238 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~~l~s  238 (266)
                      .|+++|++++.|+++++.|++++|||||+|+||+|+|++...... +...... ...| +++  .+|+ |+|+.+++|++
T Consensus       154 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~-~~~~-~~~~~~~pe-dvA~~v~~l~s  229 (247)
T 2jah_A          154 VYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITH-TATKEMY-EQRI-SQIRKLQAQ-DIAEAVRYAVT  229 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCC-HHHHHHH-HHHT-TTSCCBCHH-HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccc-hhhHHHH-Hhcc-cccCCCCHH-HHHHHHHHHhC
Confidence            999999999999999999999999999999999999998754322 2221222 2234 555  7776 99999999999


Q ss_pred             CCCCcccccEEEEcC
Q 024517          239 DGSRYMTGTTIYVDG  253 (266)
Q Consensus       239 ~~~~~~~G~~i~~dg  253 (266)
                      +...+++++. .+++
T Consensus       230 ~~~~~~~~~i-~i~~  243 (247)
T 2jah_A          230 APHHATVHEI-FIRP  243 (247)
T ss_dssp             SCTTEEEEEE-EEEE
T ss_pred             CCccCccceE-EecC
Confidence            8888888875 4543

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-43  Score=292.52  Aligned_cols=232  Identities=21%  Similarity=0.308  Sum_probs=202.4

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEec--CCCchHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDM--EEDREGAFDEAVD   78 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~~~~~v~~~~~   78 (266)
                      .+++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++....  ..+..++.+|+  ++.+  +++++++
T Consensus        11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~d~d~~~~~--~~~~~~~   86 (247)
T 3i1j_A           11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG--QPQPLIIALNLENATAQ--QYRELAA   86 (247)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--SCCCEEEECCTTTCCHH--HHHHHHH
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC--CCCceEEEeccccCCHH--HHHHHHH
Confidence            47899999999999999999999999999999999 7777788888776542  24677888888  6666  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++.+.++++|++|||||......++.+.+.++|++.+++|+.+++.+++.++|+|++++ .++||++||..+..+  .++
T Consensus        87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~--~~~  163 (247)
T 3i1j_A           87 RVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGRKG--RAN  163 (247)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGTSC--CTT
T ss_pred             HHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhcCC--CCC
Confidence            99999999999999999866667888899999999999999999999999999998776 799999999998877  688


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCC-CCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGK-HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      ...|+++|++++.|+++++.|+.+ +|||||+|+||+++|++......          ..+..++.+|+ |+|+.++||+
T Consensus       164 ~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~----------~~~~~~~~~p~-dva~~~~~l~  232 (247)
T 3i1j_A          164 WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYP----------DENPLNNPAPE-DIMPVYLYLM  232 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHST----------TSCGGGSCCGG-GGTHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhccc----------ccCccCCCCHH-HHHHHHHHHh
Confidence            999999999999999999999976 79999999999999987543221          11223456676 9999999999


Q ss_pred             cCCCCcccccEEEE
Q 024517          238 SDGSRYMTGTTIYV  251 (266)
Q Consensus       238 s~~~~~~~G~~i~~  251 (266)
                      ++.++++|||.|.+
T Consensus       233 s~~~~~itG~~i~~  246 (247)
T 3i1j_A          233 GPDSTGINGQALNA  246 (247)
T ss_dssp             SGGGTTCCSCEEEC
T ss_pred             CchhccccCeeecC
Confidence            99999999999975

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=2.1e-43  Score=291.60  Aligned_cols=246  Identities=20%  Similarity=0.291  Sum_probs=210.9

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      +++++|++|||||++|||++++++|+++|++|++++ +.+..++..+++...    .++.++.+|+++.+  ++++++++
T Consensus         2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~--~~~~~~~~   75 (251)
T 1zk4_A            2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP----DQIQFFQHDSSDED--GWTKLFDA   75 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT----TTEEEEECCTTCHH--HHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc----CceEEEECCCCCHH--HHHHHHHH
Confidence            357899999999999999999999999999999999 555555555555321    47899999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.++|.|.+.+.+++||++||..+..+  .++.
T Consensus        76 ~~~~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~  152 (251)
T 1zk4_A           76 TEKAFGPVSTLVNNAGIA-VNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG--DPSL  152 (251)
T ss_dssp             HHHHHSSCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC--CTTC
T ss_pred             HHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccC--CCCC
Confidence            999999999999999984 5567778899999999999999999999999999987652389999999988766  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhC--CCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          160 AAYGACAASIHQLVRTAAMEIG--KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      ..|+++|++++.|+++++.|+.  +.||+++.|+||++.|++..... ............|.+++.+|+ |+|+.+.+|+
T Consensus       153 ~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~  230 (251)
T 1zk4_A          153 GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP-GAEEAMSQRTKTPMGHIGEPN-DIAYICVYLA  230 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST-THHHHHTSTTTCTTSSCBCHH-HHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcC-chhhhHHHhhcCCCCCCcCHH-HHHHHHHHHc
Confidence            9999999999999999999987  88999999999999999876532 222222234556778888887 9999999999


Q ss_pred             cCCCCcccccEEEEcCCccc
Q 024517          238 SDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       238 s~~~~~~~G~~i~~dgG~~~  257 (266)
                      ++...+++|+.+.+|||.++
T Consensus       231 ~~~~~~~~G~~~~v~gG~~~  250 (251)
T 1zk4_A          231 SNESKFATGSEFVVDGGYTA  250 (251)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CcccccccCcEEEECCCccC
Confidence            98888999999999999864

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=2.8e-43  Score=293.13  Aligned_cols=242  Identities=21%  Similarity=0.299  Sum_probs=203.5

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||++++++|+++|++|++++ +.++.++..+++      +.++.++.+|+++.+  ++++++++
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~--~v~~~~~~   79 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL------GNNCVFAPADVTSEK--DVQTALAL   79 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH------CTTEEEEECCTTCHH--HHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh------CCceEEEEcCCCCHH--HHHHHHHH
Confidence            678999999999999999999999999999999999 666666666555      257899999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCC------CCCHHHHHHHHHccchHHHHHHHHHHHHHhccC-----CCCeEEEEecc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPL------QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK-----AGGSIVFLTSI  148 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~g~iv~iss~  148 (266)
                      +.+.++++|++|||||... ..++.      +.+.++|+..+++|+.+++.+++.+.|+|.++.     ..++||++||.
T Consensus        80 ~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~  158 (265)
T 2o23_A           80 AKGKFGRVDVAVNCAGIAV-ASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASV  158 (265)
T ss_dssp             HHHHHSCCCEEEECCCCCC-CCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCT
T ss_pred             HHHHCCCCCEEEECCccCC-CCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCCh
Confidence            9999999999999999843 33333      378899999999999999999999999998761     26899999999


Q ss_pred             cccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCC-CCCCCChh
Q 024517          149 IGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPL-HRWLDVKN  227 (266)
Q Consensus       149 ~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  227 (266)
                      .+..+  .++...|+++|++++.|++.++.|++++||++|+|+||+++|++.....  +..........|. +++.+|+ 
T Consensus       159 ~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-  233 (265)
T 2o23_A          159 AAFEG--QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP--EKVCNFLASQVPFPSRLGDPA-  233 (265)
T ss_dssp             HHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHTCSSSCSCBCHH-
T ss_pred             hhcCC--CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccC--HHHHHHHHHcCCCcCCCCCHH-
Confidence            88776  5788999999999999999999999999999999999999999875431  2223334455677 7788887 


Q ss_pred             hHHHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          228 DLASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       228 dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      |+|+.+++|++.  .+++|+.+.+|||.++.
T Consensus       234 dva~~~~~l~~~--~~~~G~~i~vdgG~~~~  262 (265)
T 2o23_A          234 EYAHLVQAIIEN--PFLNGEVIRLDGAIRMQ  262 (265)
T ss_dssp             HHHHHHHHHHHC--TTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHhhc--CccCceEEEECCCEecC
Confidence            999999999963  68999999999998764

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=5.5e-43  Score=293.38  Aligned_cols=254  Identities=23%  Similarity=0.321  Sum_probs=213.4

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||++++++|+++|++|++++ +.+..++..+++..    ..++.++.+|++|.+  ++++++++
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~--~~~~~~~~   85 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS----PDVISFVHCDVTKDE--DVRNLVDT   85 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC----TTTEEEEECCTTCHH--HHHHHHHH
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC----CCceEEEECCCCCHH--HHHHHHHH
Confidence            567899999999999999999999999999999998 44444555555421    237899999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCC-CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCC-
Q 024517           80 ACQILGNLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP-  157 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~-  157 (266)
                      +.+.++++|++|||||.... ..++.+.+.++|+..+++|+.+++.+++.++|.|.+++ .++||++||..+..+  .+ 
T Consensus        86 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~--~~~  162 (278)
T 2bgk_A           86 TIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTA--GEG  162 (278)
T ss_dssp             HHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCC--CTT
T ss_pred             HHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCeEEEEeeccccCC--CCC
Confidence            99999999999999997432 25677889999999999999999999999999998766 689999999988765  35 


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-cHHHHHHHhhc--cCCCCCCCChhhHHHHHH
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-QERAVKLVREA--APLHRWLDVKNDLASTVI  234 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~dva~~~~  234 (266)
                      +...|+++|++++.|++.++.|+++.||+++.|+||++.|++...... .......+...  .|.+++.+|+ |+|+.++
T Consensus       163 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~  241 (278)
T 2bgk_A          163 VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAE-DVADAVA  241 (278)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHH-HHHHHHH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHH-HHHHHHH
Confidence            778999999999999999999999999999999999999998765432 12222222222  3456777887 9999999


Q ss_pred             HHccCCCCcccccEEEEcCCccccCCCccC
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSITRPRMRS  264 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~~~~~~~~  264 (266)
                      +|+++...+++|+.+.+|||..++.+++.+
T Consensus       242 ~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~  271 (278)
T 2bgk_A          242 YLAGDESKYVSGLNLVIDGGYTRTNPAFPT  271 (278)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGCCTHHHH
T ss_pred             HHcCcccccCCCCEEEECCcccccCCccch
Confidence            999988889999999999999988776654

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=4.1e-44  Score=297.51  Aligned_cols=242  Identities=16%  Similarity=0.174  Sum_probs=206.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHH---cCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAK---RGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAV   77 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~---~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~   77 (266)
                      ++++|++|||||++|||+++|++|++   +|++|++++ +.+++++..+++....+ +.++.++.+|+++++  ++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~--~v~~~~   79 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQP-DLKVVLAAADLGTEA--GVQRLL   79 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCT-TSEEEEEECCTTSHH--HHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCC-CCeEEEEecCCCCHH--HHHHHH
Confidence            57899999999999999999999999   899999999 66677777777754422 257899999999998  999999


Q ss_pred             HHHHH--HhCCCC--EEEEcCCCCCCC-CCCCC-CCHHHHHHHHHccchHHHHHHHHHHHHHhcc--CCCCeEEEEeccc
Q 024517           78 DKACQ--ILGNLD--AFVHCYTYEGKM-QDPLQ-VGEDEFKKLVKINFVAPWFLLKAVGRRMKES--KAGGSIVFLTSII  149 (266)
Q Consensus        78 ~~~~~--~~g~id--~li~~ag~~~~~-~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~g~iv~iss~~  149 (266)
                      +++.+  .+|++|  ++|||||..... .++.+ .+.++|+.++++|+.+++.++++++|+|.++  + .|+||++||..
T Consensus        80 ~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-~g~iv~isS~~  158 (259)
T 1oaa_A           80 SAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGL-SKTVVNISSLC  158 (259)
T ss_dssp             HHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTC-EEEEEEECCGG
T ss_pred             HHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-CceEEEEcCch
Confidence            99988  678899  999999974332 45666 6899999999999999999999999999876  3 58999999999


Q ss_pred             ccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc---cHHHHHHHhhccCCCCCCCCh
Q 024517          150 GAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---QERAVKLVREAAPLHRWLDVK  226 (266)
Q Consensus       150 ~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  226 (266)
                      +..+  .++...|+++|++++.|+++++.|+++  ||||+|+||+++|++......   .++....+....|.+++.+|+
T Consensus       159 ~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~  234 (259)
T 1oaa_A          159 ALQP--YKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCG  234 (259)
T ss_dssp             GTSC--CTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHH
T ss_pred             hcCC--CCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHH
Confidence            8776  688999999999999999999999974  999999999999998654321   233334445566788888887


Q ss_pred             hhHHHHHHHHccCCCCcccccEEEEcC
Q 024517          227 NDLASTVIYLISDGSRYMTGTTIYVDG  253 (266)
Q Consensus       227 ~dva~~~~~l~s~~~~~~~G~~i~~dg  253 (266)
                       |+|+.+++|+++ .+++||+.+.+||
T Consensus       235 -dvA~~v~~l~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          235 -TSAQKLLGLLQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             -HHHHHHHHHHHH-CCSCTTEEEETTC
T ss_pred             -HHHHHHHHHHhh-ccccCCcEEeccC
Confidence             999999999986 6899999999986

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=9.4e-44  Score=292.87  Aligned_cols=232  Identities=16%  Similarity=0.182  Sum_probs=195.5

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEE-e--cc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLV-G--NE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~-~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +|++|||||++|||+++|++|+++|++|+++ +  +. +++++..+++    .   .     +|+.|.+  +++++++++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~----~---~-----~~~~~~~--~v~~~~~~~   66 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN----P---G-----TIALAEQ--KPERLVDAT   66 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS----T---T-----EEECCCC--CGGGHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh----C---C-----CcccCHH--HHHHHHHHH
Confidence            5899999999999999999999999999998 4  54 3333333332    1   1     2344777  888999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCC---CCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCC
Q 024517           81 CQILGNLDAFVHCYTYEGKM---QDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP  157 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  157 (266)
                      .+.++++|++|||||.. ..   .++.+.+.++|+.++++|+.+++.++++++|+|.+++ .|+||++||..+..+  .+
T Consensus        67 ~~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~--~~  142 (244)
T 1zmo_A           67 LQHGEAIDTIVSNDYIP-RPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKKP--LA  142 (244)
T ss_dssp             GGGSSCEEEEEECCCCC-TTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSC--CT
T ss_pred             HHHcCCCCEEEECCCcC-CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCCC--CC
Confidence            99999999999999984 44   6788899999999999999999999999999998766 699999999988776  58


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCc---ccccccHHHHHHHhh-ccCCCCCCCChhhHHHHH
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY---PIAVGQERAVKLVRE-AAPLHRWLDVKNDLASTV  233 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~  233 (266)
                      +...|+++|++++.|+++++.|++++||+||+|+||+|+|++.   .....+ +....+.. ..|.+++.+|+ |+|+.+
T Consensus       143 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~p~~r~~~pe-~vA~~v  220 (244)
T 1zmo_A          143 YNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENN-PELRERVDRDVPLGRLGRPD-EMGALI  220 (244)
T ss_dssp             TCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHC-HHHHHHHHHHCTTCSCBCHH-HHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccch-HHHHHHHhcCCCCCCCcCHH-HHHHHH
Confidence            8899999999999999999999999999999999999999987   432211 22233334 67888988887 999999


Q ss_pred             HHHccCCCCcccccEEEEcCCcc
Q 024517          234 IYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       234 ~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      ++|+++..+++||+.+.+|||.+
T Consensus       221 ~~l~s~~~~~~tG~~i~vdgG~~  243 (244)
T 1zmo_A          221 TFLASRRAAPIVGQFFAFTGGYL  243 (244)
T ss_dssp             HHHHTTTTGGGTTCEEEESTTCC
T ss_pred             HHHcCccccCccCCEEEeCCCCC
Confidence            99999989999999999999964

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=2.2e-43  Score=292.39  Aligned_cols=235  Identities=18%  Similarity=0.291  Sum_probs=200.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      |++|||||++|||+++|++|+++|++|++++ +.++.++..+ +...   +.++..+     |.+  +++++++++.+.+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~---~~~~~~~-----d~~--~v~~~~~~~~~~~   70 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET---YPQLKPM-----SEQ--EPAELIEAVTSAY   70 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH---CTTSEEC-----CCC--SHHHHHHHHHHHH
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc---CCcEEEE-----CHH--HHHHHHHHHHHHh
Confidence            6899999999999999999999999999999 6566665544 5433   2344443     667  8999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHH
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA  164 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~  164 (266)
                      +++|++|||||......++.+.+.++|+.++++|+.+++.++++++|+|.+++ .|+||++||..+..+  .++...|++
T Consensus        71 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~~Y~~  147 (254)
T 1zmt_A           71 GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGP--WKELSTYTS  147 (254)
T ss_dssp             SCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSC--CTTCHHHHH
T ss_pred             CCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccccC--CCCchHHHH
Confidence            99999999999842556788899999999999999999999999999998776 699999999988776  578899999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEecCcc---------cCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          165 CAASIHQLVRTAAMEIGKHKIRVNGIARGLH---------LQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      +|++++.|+++++.|++++||+||+|+||+|         +|++...   .++....+....|.+++.+|+ |+|+.+++
T Consensus       148 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~---~~~~~~~~~~~~p~~~~~~p~-dvA~~v~~  223 (254)
T 1zmt_A          148 ARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKT---NPEHVAHVKKVTALQRLGTQK-ELGELVAF  223 (254)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTT---CHHHHHHHHHHSSSSSCBCHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCccccc---ChHHHHHHhccCCCCCCcCHH-HHHHHHHH
Confidence            9999999999999999999999999999999         7765433   123333445567888988887 99999999


Q ss_pred             HccCCCCcccccEEEEcCCcccc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      |+++..++++|+.+.+|||.+..
T Consensus       224 l~s~~~~~~tG~~~~vdgG~~~~  246 (254)
T 1zmt_A          224 LASGSCDYLTGQVFWLAGGFPMI  246 (254)
T ss_dssp             HHTTSCGGGTTCEEEESTTCCCC
T ss_pred             HhCcccCCccCCEEEECCCchhh
Confidence            99998899999999999998754

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=4.5e-43  Score=290.24  Aligned_cols=246  Identities=23%  Similarity=0.374  Sum_probs=212.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||++++++|+++|++|++++ +.+++++..+++...   +.++.++.+|+++++  ++++++++
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~   81 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL---GGQAFACRCDITSEQ--ELSALADF   81 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHH--HHHHHHHH
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh---CCceEEEEcCCCCHH--HHHHHHHH
Confidence            457899999999999999999999999999999999 656666666666543   357889999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||.. ...++ +.+.++|+..+++|+.+++.+++.++|+|.+.+ .++||++||..+..+  .++.
T Consensus        82 ~~~~~~~~d~vi~~Ag~~-~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~--~~~~  156 (255)
T 1fmc_A           82 AISKLGKVDILVNNAGGG-GPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENK--NINM  156 (255)
T ss_dssp             HHHHHSSCCEEEECCCCC-CCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCC--CTTC
T ss_pred             HHHhcCCCCEEEECCCCC-CCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCC--CCCC
Confidence            999999999999999984 33444 678999999999999999999999999998766 689999999988766  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|++.++.++++.||++|.|+||++.|++..... .+..........|.+++++++ |+|+.+.+|+++
T Consensus       157 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~  234 (255)
T 1fmc_A          157 TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQ-DIANAALFLCSP  234 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-CHHHHHHHHHTCSSCSCBCHH-HHHHHHHHHHSG
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhcc-ChHHHHHHHhcCCcccCCCHH-HHHHHHHHHhCC
Confidence            999999999999999999999999999999999999999765432 233344455567888888887 999999999998


Q ss_pred             CCCcccccEEEEcCCcccc
Q 024517          240 GSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~  258 (266)
                      ...+++|+.+.+|||..++
T Consensus       235 ~~~~~~G~~~~v~gg~~~s  253 (255)
T 1fmc_A          235 AASWVSGQILTVSGGGVQE  253 (255)
T ss_dssp             GGTTCCSCEEEESTTSCCC
T ss_pred             ccccCCCcEEEECCceecc
Confidence            7789999999999998765

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=2.4e-43  Score=313.61  Aligned_cols=241  Identities=20%  Similarity=0.238  Sum_probs=204.1

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +++|++|||||++|||+++|++|+++|++|+++++....++..+...+.     .+.++.||++|.+  +++++++++.+
T Consensus       211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~-----~~~~~~~Dvtd~~--~v~~~~~~~~~  283 (454)
T 3u0b_A          211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV-----GGTALTLDVTADD--AVDKITAHVTE  283 (454)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH-----TCEEEECCTTSTT--HHHHHHHHHHH
T ss_pred             CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-----CCeEEEEecCCHH--HHHHHHHHHHH
Confidence            5799999999999999999999999999999998544444444333322     4568999999999  99999999999


Q ss_pred             HhCC-CCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           83 ILGN-LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        83 ~~g~-id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      .+++ ||++|||||+. ...++.+.+.++|+.++++|+.+++++.+.+.|.|.+++ .++||++||..+..+  .++...
T Consensus       284 ~~g~~id~lV~nAGv~-~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-~g~iV~iSS~a~~~g--~~g~~~  359 (454)
T 3u0b_A          284 HHGGKVDILVNNAGIT-RDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-GGRVIGLSSMAGIAG--NRGQTN  359 (454)
T ss_dssp             HSTTCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT-TCEEEEECCHHHHHC--CTTCHH
T ss_pred             HcCCCceEEEECCccc-CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEEeChHhCCC--CCCCHH
Confidence            9976 99999999984 557788899999999999999999999999999988766 799999999999877  589999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCC
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS  241 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  241 (266)
                      |+++|++++.|+++++.|++++||+||+|+||+|+|++......  ..........|+++.++|+ |+|+.+.||+|+.+
T Consensus       360 YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~l~r~g~pe-dvA~~v~fL~s~~a  436 (454)
T 3u0b_A          360 YATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPL--ATREVGRRLNSLFQGGQPV-DVAELIAYFASPAS  436 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC------------CHHHHHSBTTSSCBCHH-HHHHHHHHHHCGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcch--hhHHHHHhhccccCCCCHH-HHHHHHHHHhCCcc
Confidence            99999999999999999999999999999999999998765422  1122334456888888887 99999999999999


Q ss_pred             CcccccEEEEcCCccc
Q 024517          242 RYMTGTTIYVDGAQSI  257 (266)
Q Consensus       242 ~~~~G~~i~~dgG~~~  257 (266)
                      +++|||+|.+|||..+
T Consensus       437 ~~itG~~i~vdGG~~l  452 (454)
T 3u0b_A          437 NAVTGNTIRVCGQAML  452 (454)
T ss_dssp             TTCCSCEEEESSSBSC
T ss_pred             CCCCCcEEEECCcccc
Confidence            9999999999999865

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=9e-44  Score=289.14  Aligned_cols=220  Identities=20%  Similarity=0.295  Sum_probs=191.9

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      |++++|++|||||++|||+++|++|+++|++|+++++...                      +|++|++  ++++++++ 
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~~--~v~~~~~~-   56 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDEK--SVYHYFET-   56 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCHH--HHHHHHHH-
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCHH--HHHHHHHH-
Confidence            6789999999999999999999999999999999984322                      7999988  88888865 


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                         ++++|++|||||......++.+.+.++|+..+++|+.+++.++++++|+|++   +|+||++||..+..+  .++..
T Consensus        57 ---~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~~sS~~~~~~--~~~~~  128 (223)
T 3uce_A           57 ---IGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ---GGSITLTSGMLSRKV--VANTY  128 (223)
T ss_dssp             ---HCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE---EEEEEEECCGGGTSC--CTTCH
T ss_pred             ---hCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC---CeEEEEecchhhccC--CCCch
Confidence               4899999999998656678889999999999999999999999999999976   489999999988776  68899


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc--HHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ--ERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      .|+++|++++.|+++++.|+++  ||||+|+||+++|++.......  +...+......|.+++++|+ |+|+.+++|++
T Consensus       129 ~Y~asK~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dvA~~~~~l~~  205 (223)
T 3uce_A          129 VKAAINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEAS-DIAMAYLFAIQ  205 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHH-HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHH-HHHHHHHHHcc
Confidence            9999999999999999999987  9999999999999988664322  22345566778999999988 99999999997


Q ss_pred             CCCCcccccEEEEcCCcccc
Q 024517          239 DGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~~~  258 (266)
                      +  +++||+.|.+|||.+++
T Consensus       206 ~--~~~tG~~i~vdgG~~~s  223 (223)
T 3uce_A          206 N--SYMTGTVIDVDGGALLG  223 (223)
T ss_dssp             C--TTCCSCEEEESTTGGGC
T ss_pred             C--CCCCCcEEEecCCeecC
Confidence            4  79999999999998763

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=3.4e-43  Score=298.11  Aligned_cols=254  Identities=18%  Similarity=0.260  Sum_probs=213.5

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.++.++..+++.+..  +.++.++.+|+++.+  ++++++++
T Consensus        22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~--~~~~~~~~   97 (302)
T 1w6u_A           22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT--GNKVHAIQCDVRDPD--MVQNTVSE   97 (302)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SSCEEEEECCTTCHH--HHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc--CCceEEEEeCCCCHH--HHHHHHHH
Confidence            357899999999999999999999999999999999 6666666666665432  257899999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||. ....++.+.+.++|+..+++|+.+++.+++.++|.|.++...++||++||..+..+  .++.
T Consensus        98 ~~~~~g~id~li~~Ag~-~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~  174 (302)
T 1w6u_A           98 LIKVAGHPNIVINNAAG-NFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG--SGFV  174 (302)
T ss_dssp             HHHHTCSCSEEEECCCC-CCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC--CTTC
T ss_pred             HHHHcCCCCEEEECCCC-CCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC--CCCc
Confidence            99999999999999997 35567778899999999999999999999999999974433689999999988766  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC-CcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD-EYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ..|+++|++++.|+++++.+++++||++++|+||++.|+ +..................|.+++++|+ |+|+.+++|++
T Consensus       175 ~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dva~~~~~l~~  253 (302)
T 1w6u_A          175 VPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVE-ELANLAAFLCS  253 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHH-HHHHHHHHHTS
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHH-HHHHHHHHHcC
Confidence            999999999999999999999999999999999999998 4333222222223445567888888887 99999999999


Q ss_pred             CCCCcccccEEEEcCCccccCCCc
Q 024517          239 DGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      +...+++|+.+.+|||..++..++
T Consensus       254 ~~~~~~~G~~~~v~gg~~~~~~~~  277 (302)
T 1w6u_A          254 DYASWINGAVIKFDGGEEVLISGE  277 (302)
T ss_dssp             GGGTTCCSCEEEESTTHHHHHHST
T ss_pred             CcccccCCCEEEECCCeeeccCCc
Confidence            888899999999999988765443

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.9e-43  Score=292.90  Aligned_cols=253  Identities=23%  Similarity=0.346  Sum_probs=203.6

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhccc----CCCCCeEEEEEecCCCchHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSL----KGGQPVEVVGLDMEEDREGAFDEA   76 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~v~~~   76 (266)
                      ++++|++|||||++|||++++++|+++|++|++++ +.++.++..+++....    ....++.++.+|+++.+  +++++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--~~~~~   81 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEAR--AARCL   81 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHH--HHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHH--HHHHH
Confidence            47899999999999999999999999999999999 5555555554443221    00146889999999988  99999


Q ss_pred             HHHHHHHhCCC-CEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC
Q 024517           77 VDKACQILGNL-DAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL  155 (266)
Q Consensus        77 ~~~~~~~~g~i-d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~  155 (266)
                      ++++.+.++++ |++|||||.. ...++.+.+.++|+..+++|+.+++.+++.+.|.|.+++..++||++||..+..+  
T Consensus        82 ~~~~~~~~g~i~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~--  158 (264)
T 2pd6_A           82 LEQVQACFSRPPSVVVSCAGIT-QDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVG--  158 (264)
T ss_dssp             HHHHHHHHSSCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHC--
T ss_pred             HHHHHHHhCCCCeEEEECCCcC-CCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccC--
Confidence            99999999999 9999999984 4466778899999999999999999999999999987542489999999988776  


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      .++...|+++|++++.|++.++.++++.||++++|+||++.|++.....  ...........|.+++.+|+ |+|+.+++
T Consensus       159 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~-dva~~~~~  235 (264)
T 2pd6_A          159 NVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVP--QKVVDKITEMIPMGHLGDPE-DVADVVAF  235 (264)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC------------CTGGGCTTCSCBCHH-HHHHHHHH
T ss_pred             CCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcC--HHHHHHHHHhCCCCCCCCHH-HHHHHHHH
Confidence            5888999999999999999999999999999999999999999875431  22333344556778888887 99999999


Q ss_pred             HccCCCCcccccEEEEcCCccccCCCc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      ++++...+++|+.+.+|||.+++...+
T Consensus       236 l~~~~~~~~~G~~~~v~gg~~~~~~~~  262 (264)
T 2pd6_A          236 LASEDSGYITGTSVEVTGGLFMAENLY  262 (264)
T ss_dssp             HHSGGGTTCCSCEEEESTTC-------
T ss_pred             HcCCcccCCCCCEEEECCCceeccccC
Confidence            999878899999999999998776544

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.7e-43  Score=297.16  Aligned_cols=242  Identities=19%  Similarity=0.228  Sum_probs=196.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++.+..  +..+.++.+|++|.+  +++++++++
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~--~v~~~~~~~  105 (281)
T 4dry_A           30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT--GNIVRAVVCDVGDPD--QVAALFAAV  105 (281)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SSCEEEEECCTTCHH--HHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CCeEEEEEcCCCCHH--HHHHHHHHH
Confidence            46899999999999999999999999999999999 6677777777776442  234689999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC-CCCeEEEEecccccccCCCCCc
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK-AGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      .+.+|++|++|||||......++.+.+.++|++++++|+.+++.++++++|+|.+++ .+|+||++||..+..+  .++.
T Consensus       106 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~--~~~~  183 (281)
T 4dry_A          106 RAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTP--RPNS  183 (281)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCC--CTTC
T ss_pred             HHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCC--CCCC
Confidence            999999999999999854557888899999999999999999999999999998764 2589999999998877  6889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|+|++.|+++++.|++++|||||+|+||+|+|++........   .......|..++.+|+ |+|++++||+|.
T Consensus       184 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~pe-dvA~~v~fL~s~  259 (281)
T 4dry_A          184 APYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGV---LQANGEVAAEPTIPIE-HIAEAVVYMASL  259 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEE---ECTTSCEEECCCBCHH-HHHHHHHHHHHS
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchh---hhhhhcccccCCCCHH-HHHHHHHHHhCC
Confidence            999999999999999999999999999999999999999876542211   0112234566777777 999999999996


Q ss_pred             CC-CcccccEEEEcC
Q 024517          240 GS-RYMTGTTIYVDG  253 (266)
Q Consensus       240 ~~-~~~~G~~i~~dg  253 (266)
                      .. ..+++..+.-..
T Consensus       260 ~~~~~i~~~~i~p~~  274 (281)
T 4dry_A          260 PLSANVLTMTVMATR  274 (281)
T ss_dssp             CTTEEEEEEEEEETT
T ss_pred             CccCccccEEEEecc
Confidence            54 455555554433

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=4.7e-43  Score=288.47  Aligned_cols=240  Identities=24%  Similarity=0.361  Sum_probs=201.9

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||++++++|+++|++|++++ +.++++++.+++       ....++.+|+++.+  +++++++ 
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~D~~~~~--~~~~~~~-   72 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC-------PGIEPVCVDLGDWE--ATERALG-   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-------TTCEEEECCTTCHH--HHHHHHT-
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-------CCCCEEEEeCCCHH--HHHHHHH-
Confidence            567899999999999999999999999999999998 444444444332       24567799999988  8888776 


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                         .++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.+.|.|.+++..++||++||..+..+  .++.
T Consensus        73 ---~~~~id~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~  146 (244)
T 3d3w_A           73 ---SVGPVDLLVNNAAVA-LLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA--VTNH  146 (244)
T ss_dssp             ---TCCCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC--CTTB
T ss_pred             ---HcCCCCEEEECCccC-CCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccC--CCCC
Confidence               568899999999983 4566778889999999999999999999999999987542489999999988766  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|++.++.|++++||+++.|+||++.|++.......+.....+....|.+++.+|+ |+|+.+++|+++
T Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~  225 (244)
T 3d3w_A          147 SVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVE-HVVNAILFLLSD  225 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHH-HHHHHHHHHHSG
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHH-HHHHHHHHHcCc
Confidence            9999999999999999999999899999999999999998654322222333445567888888887 999999999998


Q ss_pred             CCCcccccEEEEcCCccc
Q 024517          240 GSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~  257 (266)
                      ...+++|+.+.+|||.+.
T Consensus       226 ~~~~~~G~~~~v~gG~~~  243 (244)
T 3d3w_A          226 RSGMTTGSTLPVEGGFWA  243 (244)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             cccCCCCCEEEECCCccC
Confidence            778999999999999764

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=7.1e-43  Score=287.90  Aligned_cols=244  Identities=23%  Similarity=0.386  Sum_probs=210.9

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||++++++|+++|++|++++ +.++.++..+++.+..  +.++.++.+|+++.+  ++++++++
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~--~~~~~~~~   78 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY--GVKAHGVEMNLLSEE--SINKAFEE   78 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH--CCCEEEEECCTTCHH--HHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc--CCceEEEEccCCCHH--HHHHHHHH
Confidence            347899999999999999999999999999999999 5556666666654322  257899999999988  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.++|.|.+++ .++||++||..+..+  .++.
T Consensus        79 ~~~~~~~~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~--~~~~  154 (248)
T 2pnf_A           79 IYNLVDGIDILVNNAGIT-RDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFTG--NVGQ  154 (248)
T ss_dssp             HHHHSSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHHHC--CTTC
T ss_pred             HHHhcCCCCEEEECCCCC-CCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhcCC--CCCC
Confidence            999999999999999984 446677889999999999999999999999999998766 689999999887766  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|++.++.|+.+.||+++.|+||++.|++....  .......+....|.+++.+|+ |+|+.+.+++++
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~  231 (248)
T 2pnf_A          155 VNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL--SEEIKQKYKEQIPLGRFGSPE-EVANVVLFLCSE  231 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCHH-HHHHHHHHHHSG
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc--cHHHHHHHHhcCCCCCccCHH-HHHHHHHHHhCc
Confidence            99999999999999999999998999999999999999987543  233334444556778888887 999999999998


Q ss_pred             CCCcccccEEEEcCCc
Q 024517          240 GSRYMTGTTIYVDGAQ  255 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~  255 (266)
                      ...+++|+.+.+|||.
T Consensus       232 ~~~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          232 LASYITGEVIHVNGGM  247 (248)
T ss_dssp             GGTTCCSCEEEESTTC
T ss_pred             hhhcCCCcEEEeCCCc
Confidence            7789999999999996

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=3.8e-43  Score=287.65  Aligned_cols=224  Identities=14%  Similarity=0.182  Sum_probs=186.4

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      |++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++.      .++.++.+|+++.+  +++++++++.
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~--~v~~~~~~~~   72 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG------NAVIGIVADLAHHE--DVDVAFAAAV   72 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG------GGEEEEECCTTSHH--HHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------CCceEEECCCCCHH--HHHHHHHHHH
Confidence            3589999999999999999999999999999999 6666666666652      36899999999998  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.+|++|++|||||. ....++.+.+.++|+.++++|+.+++.+++.++|.|++++  ++||++||..+..+  .++...
T Consensus        73 ~~~g~id~lvnnAg~-~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~~~~--~~~~~~  147 (235)
T 3l6e_A           73 EWGGLPELVLHCAGT-GEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG--GVLANVLSSAAQVG--KANESL  147 (235)
T ss_dssp             HHHCSCSEEEEECCC-C------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--EEEEEECCEECCSS--CSSHHH
T ss_pred             HhcCCCcEEEECCCC-CCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEEeCHHhcCC--CCCCcH
Confidence            999999999999998 4567788899999999999999999999999999998764  69999999998877  688999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc-CC
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS-DG  240 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-~~  240 (266)
                      |+++|+++++|+++++.|++++|||||+|+||+|+|+++.....           .+..++.+|+ |+|+.++++++ +.
T Consensus       148 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-----------~~~~~~~~pe-dvA~~v~~l~~~~~  215 (235)
T 3l6e_A          148 YCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH-----------VDPSGFMTPE-DAAAYMLDALEARS  215 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC----------------------CBCHH-HHHHHHHHHTCCCS
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC-----------CCCcCCCCHH-HHHHHHHHHHhCCC
Confidence            99999999999999999999999999999999999998754311           2334677787 99999999998 55


Q ss_pred             CCcccccEEEE
Q 024517          241 SRYMTGTTIYV  251 (266)
Q Consensus       241 ~~~~~G~~i~~  251 (266)
                      ..+++|-.+.-
T Consensus       216 ~~~i~~i~~~~  226 (235)
T 3l6e_A          216 SCHVTDLFIGR  226 (235)
T ss_dssp             SEEEEEEEEEE
T ss_pred             CcceeeEEEec
Confidence            67788765544

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=5.4e-43  Score=288.03  Aligned_cols=240  Identities=22%  Similarity=0.352  Sum_probs=207.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEE-e-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLV-G-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +|++|||||++|||++++++|+++|++|+++ + +.++.++..+++...   +.++.++.+|+++.+  +++++++++.+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~~~~   75 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY---GGQAITFGGDVSKEA--DVEAMMKTAID   75 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH---TCEEEEEECCTTSHH--HHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCcEEEEeCCCCCHH--HHHHHHHHHHH
Confidence            6899999999999999999999999999985 5 445556666666543   357889999999998  99999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhh
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY  162 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y  162 (266)
                      .++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.+.|+|.+++ .++||++||..+..+  .++...|
T Consensus        76 ~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~--~~~~~~Y  151 (244)
T 1edo_A           76 AWGTIDVVVNNAGIT-RDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIG--NIGQANY  151 (244)
T ss_dssp             HSSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHC--CTTCHHH
T ss_pred             HcCCCCEEEECCCCC-CCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCEEEEECChhhcCC--CCCCccc
Confidence            999999999999984 446677889999999999999999999999999998766 689999999988766  5788999


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHc-cCCC
Q 024517          163 GACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI-SDGS  241 (266)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-s~~~  241 (266)
                      +++|++++.|++.++.++.+.||++|.|+||++.|++....  .+..........|.+++.+|+ |+|+.+.+|+ ++..
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~~  228 (244)
T 1edo_A          152 AAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL--GEDMEKKILGTIPLGRTGQPE-NVAGLVEFLALSPAA  228 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CHHHHHHHHTSCTTCSCBCHH-HHHHHHHHHHHCSGG
T ss_pred             hhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc--ChHHHHHHhhcCCCCCCCCHH-HHHHHHHHHhCCCcc
Confidence            99999999999999999999999999999999999986543  233334445567888888887 9999999998 6677


Q ss_pred             CcccccEEEEcCCcc
Q 024517          242 RYMTGTTIYVDGAQS  256 (266)
Q Consensus       242 ~~~~G~~i~~dgG~~  256 (266)
                      .+++|+.+.+|||.+
T Consensus       229 ~~~~G~~~~v~gG~~  243 (244)
T 1edo_A          229 SYITGQAFTIDGGIA  243 (244)
T ss_dssp             GGCCSCEEEESTTTT
T ss_pred             CCcCCCEEEeCCCcc
Confidence            899999999999975

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=3.2e-43  Score=292.33  Aligned_cols=242  Identities=16%  Similarity=0.183  Sum_probs=195.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++...   +.++.++.+|+++++  +++++++++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~--~v~~~~~~~   76 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL---GGQCVPVVCDSSQES--EVRSLFEQV   76 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH---SSEEEEEECCTTSHH--HHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc---CCceEEEECCCCCHH--HHHHHHHHH
Confidence            57899999999999999999999999999999999 666667777776543   357889999999998  999999999


Q ss_pred             HHH-hCCCCEEEEcCCCC-C-----CCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc
Q 024517           81 CQI-LGNLDAFVHCYTYE-G-----KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER  153 (266)
Q Consensus        81 ~~~-~g~id~li~~ag~~-~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~  153 (266)
                      .+. ++++|++|||||.. .     ...++.+.+.++|+.++++|+.+++.+++.++|.|.+++ .|+||++||..+..+
T Consensus        77 ~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~  155 (260)
T 2qq5_A           77 DREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQY  155 (260)
T ss_dssp             HHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGTSC
T ss_pred             HHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhcCC
Confidence            886 89999999999531 1     235677888899999999999999999999999998766 699999999987654


Q ss_pred             CCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHH-HH-Hh-hccCCCCCCCChhhHH
Q 024517          154 GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV-KL-VR-EAAPLHRWLDVKNDLA  230 (266)
Q Consensus       154 ~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~-~~-~~-~~~~~~~~~~~~~dva  230 (266)
                         ++...|+++|++++.|+++++.|++++||+||+|+||+|+|++........... .. .. ...|.++..+|+ |+|
T Consensus       156 ---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-~va  231 (260)
T 2qq5_A          156 ---MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTE-LSG  231 (260)
T ss_dssp             ---CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHHH-HHH
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHH-HHH
Confidence               456899999999999999999999999999999999999999875432211110 11 11 123455556676 999


Q ss_pred             HHHHHHccCCC-CcccccEEEEcC
Q 024517          231 STVIYLISDGS-RYMTGTTIYVDG  253 (266)
Q Consensus       231 ~~~~~l~s~~~-~~~~G~~i~~dg  253 (266)
                      +.++||+++.. .++||+.|.+|+
T Consensus       232 ~~v~~l~s~~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          232 KCVVALATDPNILSLSGKVLPSCD  255 (260)
T ss_dssp             HHHHHHHTCTTGGGGTTCEEEHHH
T ss_pred             HHHHHHhcCcccccccceeechhh
Confidence            99999999876 489999998864

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=3.6e-43  Score=297.43  Aligned_cols=252  Identities=21%  Similarity=0.251  Sum_probs=200.2

Q ss_pred             CCCCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEEecccccHH--------HHHHHhcccCCCC---CeEEEEEec--
Q 024517            1 MENQAKRVLLTSDG--DEISKNIAFHLAKRGCRLVLVGNERRLSS--------VAEKMMGSLKGGQ---PVEVVGLDM--   65 (266)
Q Consensus         1 m~l~~k~vlItGa~--~giG~~ia~~l~~~g~~v~~~~~~~~~~~--------~~~~~~~~~~~~~---~~~~~~~D~--   65 (266)
                      |++++|++|||||+  +|||+++|++|+++|++|+++++.+....        ..+++.+ ...+.   ....+.+|+  
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   82 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRV-LPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGB-CTTSSBCCEEEEEEECTTC
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhh-hccccccccccccccceec
Confidence            67899999999999  99999999999999999999873211110        0011111 11111   134445543  


Q ss_pred             ----------CC--------CchHHHHHHHHHHHHHhCCCCEEEEcCCCCC-CCCCCCCCCHHHHHHHHHccchHHHHHH
Q 024517           66 ----------EE--------DREGAFDEAVDKACQILGNLDAFVHCYTYEG-KMQDPLQVGEDEFKKLVKINFVAPWFLL  126 (266)
Q Consensus        66 ----------~~--------~~~~~v~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~  126 (266)
                                ++        ++  +++++++++.+.++++|++|||||... ...++.+.+.++|+.++++|+.+++.++
T Consensus        83 ~~~~dv~~Dv~~~~~~~~~~~~--~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  160 (297)
T 1d7o_A           83 DNPEDVPEDVKANKRYAGSSNW--TVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLL  160 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCC--SHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             cchhhhhhhhhccccccccCHH--HHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHH
Confidence                      22        56  899999999999999999999999632 2467778899999999999999999999


Q ss_pred             HHHHHHHhccCCCCeEEEEecccccccCCCCCc-hhhHHhHHHHHHHHHHHHHHhCC-CCcEEEEEecCcccCCCccccc
Q 024517          127 KAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA-AAYGACAASIHQLVRTAAMEIGK-HKIRVNGIARGLHLQDEYPIAV  204 (266)
Q Consensus       127 ~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~-~~y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~pG~v~t~~~~~~~  204 (266)
                      ++++|+|++   +|+||++||..+..+  .++. ..|+++|++++.|+++++.|+++ +|||||+|+||+|+|++.....
T Consensus       161 ~~~~~~m~~---~g~iv~isS~~~~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~  235 (297)
T 1d7o_A          161 SHFLPIMNP---GGASISLTYIASERI--IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIG  235 (297)
T ss_dssp             HHHGGGEEE---EEEEEEEECGGGTSC--CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCS
T ss_pred             HHHHHHhcc---CceEEEEeccccccC--CCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhcc
Confidence            999999965   489999999988766  4666 68999999999999999999985 7999999999999999876532


Q ss_pred             ccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          205 GQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      ..+..........|.+++++|+ |+|+.++||+++..++++|+.+.+|||.++....
T Consensus       236 ~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~~l~s~~~~~itG~~i~vdgG~~~~~~~  291 (297)
T 1d7o_A          236 FIDTMIEYSYNNAPIQKTLTAD-EVGNAAAFLVSPLASAITGATIYVDNGLNSMGVA  291 (297)
T ss_dssp             HHHHHHHHHHHHSSSCCCBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSSC
T ss_pred             ccHHHHHHhhccCCCCCCCCHH-HHHHHHHHHhCccccCCCCCEEEECCCceeecCC
Confidence            1233334444567888888887 9999999999988899999999999998876443

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=5e-43  Score=298.95  Aligned_cols=250  Identities=24%  Similarity=0.294  Sum_probs=198.3

Q ss_pred             CCCCCcEEEEecC--CCchHHHHHHHHHHcCCeEEEEecccc-------cH-HHHHHHhcccCCCC---CeEEEEEe---
Q 024517            1 MENQAKRVLLTSD--GDEISKNIAFHLAKRGCRLVLVGNERR-------LS-SVAEKMMGSLKGGQ---PVEVVGLD---   64 (266)
Q Consensus         1 m~l~~k~vlItGa--~~giG~~ia~~l~~~g~~v~~~~~~~~-------~~-~~~~~~~~~~~~~~---~~~~~~~D---   64 (266)
                      |++++|++|||||  ++|||+++|++|+++|++|+++++.+.       .+ +..+++.+. ..+.   ...++.+|   
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~   83 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKL-PDGSLIEFAGVYPLDAAF   83 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBC-TTSCBCCCSCEEECCTTC
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhh-hccccccccccccccccc
Confidence            5688999999999  899999999999999999999874321       00 001112111 1111   13444444   


Q ss_pred             ---------cCC--------CchHHHHHHHHHHHHHhCCCCEEEEcCCCCC-CCCCCCCCCHHHHHHHHHccchHHHHHH
Q 024517           65 ---------MEE--------DREGAFDEAVDKACQILGNLDAFVHCYTYEG-KMQDPLQVGEDEFKKLVKINFVAPWFLL  126 (266)
Q Consensus        65 ---------~~~--------~~~~~v~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~  126 (266)
                               +++        .+  +++++++++.+.||++|++|||||... ...++.+.+.++|+..+++|+.+++.++
T Consensus        84 ~~~~~~~~Dv~~~~~~~~~d~~--~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  161 (315)
T 2o2s_A           84 DKPEDVPQDIKDNKRYAGVDGY--TIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLL  161 (315)
T ss_dssp             SSTTSSCHHHHTCGGGSSCCCC--SHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             cccchhhhhhhcccccccCCHH--HHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHH
Confidence                     333        56  899999999999999999999999743 2467788999999999999999999999


Q ss_pred             HHHHHHHhccCCCCeEEEEecccccccCCCCCc-hhhHHhHHHHHHHHHHHHHHhCC-CCcEEEEEecCcccCCCccccc
Q 024517          127 KAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA-AAYGACAASIHQLVRTAAMEIGK-HKIRVNGIARGLHLQDEYPIAV  204 (266)
Q Consensus       127 ~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~-~~y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~pG~v~t~~~~~~~  204 (266)
                      ++++|+|.+   +|+||++||..+..+  .+++ ..|+++|++++.|+++++.|+++ +|||||+|+||+|+|++.....
T Consensus       162 ~~~~~~m~~---~g~Iv~isS~~~~~~--~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~  236 (315)
T 2o2s_A          162 QHFGPIMNE---GGSAVTLSYLAAERV--VPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIG  236 (315)
T ss_dssp             HHHSTTEEE---EEEEEEEEEGGGTSC--CTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTT
T ss_pred             HHHHHHHhc---CCEEEEEeccccccc--CCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhcc
Confidence            999999965   489999999988766  4666 58999999999999999999985 8999999999999999864322


Q ss_pred             c--c----HHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccC
Q 024517          205 G--Q----ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       205 ~--~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      .  .    +..........|++|+++|+ |+|+.++||+++.++++||+.+.+|||.++..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~  296 (315)
T 2o2s_A          237 KSGEKSFIDYAIDYSYNNAPLRRDLHSD-DVGGAALFLLSPLARAVSGVTLYVDNGLHAMG  296 (315)
T ss_dssp             CSSSSCHHHHHHHHHHHHSSSCCCCCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTGGGCS
T ss_pred             ccccchhHHHHHHHHhccCCCCCCCCHH-HHHHHHHHHhCchhccCcCCEEEECCCeeeec
Confidence            1  0    12223334567899999988 99999999999988999999999999987643

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=2.1e-42  Score=283.09  Aligned_cols=231  Identities=23%  Similarity=0.283  Sum_probs=200.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++....  +.++.++.+|+++++  +++++++++.+
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~--~v~~~~~~~~~   76 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ--GVEVFYHHLDVSKAE--SVEEFSKKVLE   76 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--CCCEEEEECCTTCHH--HHHHHCC-HHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc--CCeEEEEEeccCCHH--HHHHHHHHHHH
Confidence            478999999999999999999999999999999 6677777777775333  368999999999999  99999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhh
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY  162 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y  162 (266)
                      .++++|++|||||. ....++.+.+.++|+.++++|+.+++.++++++|+|.+.  ++.+|+++|..+..+  .+....|
T Consensus        77 ~~g~id~li~~Ag~-~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~ii~~sS~~~~~~--~~~~~~Y  151 (235)
T 3l77_A           77 RFGDVDVVVANAGL-GYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT--GGLALVTTSDVSARL--IPYGGGY  151 (235)
T ss_dssp             HHSSCSEEEECCCC-CCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGSSC--CTTCHHH
T ss_pred             hcCCCCEEEECCcc-ccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCcEEEEecchhccc--CCCcchH
Confidence            99999999999998 456788889999999999999999999999999999544  489999999888776  5888999


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCC
Q 024517          163 GACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR  242 (266)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  242 (266)
                      +++|++++.|+++++.+  ..|||+|+|+||+|+|++........          +..++.+|+ |+|+.+.+|+++..+
T Consensus       152 ~~sKaa~~~~~~~l~~~--~~~i~v~~v~PG~v~T~~~~~~~~~~----------~~~~~~~p~-dva~~v~~l~~~~~~  218 (235)
T 3l77_A          152 VSTKWAARALVRTFQIE--NPDVRFFELRPGAVDTYFGGSKPGKP----------KEKGYLKPD-EIAEAVRCLLKLPKD  218 (235)
T ss_dssp             HHHHHHHHHHHHHHHHH--CTTSEEEEEEECSBSSSTTTCCSCCC----------GGGTCBCHH-HHHHHHHHHHTSCTT
T ss_pred             HHHHHHHHHHHHHHhhc--CCCeEEEEEeCCccccccccccCCcc----------cccCCCCHH-HHHHHHHHHHcCCCC
Confidence            99999999999999444  67899999999999999976543211          112556776 999999999999999


Q ss_pred             cccccEEEEcCCcc
Q 024517          243 YMTGTTIYVDGAQS  256 (266)
Q Consensus       243 ~~~G~~i~~dgG~~  256 (266)
                      +++|+.+..|+|..
T Consensus       219 ~~~~~~~~~~~~~~  232 (235)
T 3l77_A          219 VRVEELMLRSVYQR  232 (235)
T ss_dssp             CCCCEEEECCTTSC
T ss_pred             CccceEEEeecccC
Confidence            99999999999964

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.2e-42  Score=291.03  Aligned_cols=250  Identities=21%  Similarity=0.306  Sum_probs=211.6

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccC--CCCCeEEEEEecCCCchHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLK--GGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      .+++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++.....  .+.++.++.+|+++.+  +++++++
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~--~v~~~~~   92 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEE--EVNNLVK   92 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHH--HHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHH--HHHHHHH
Confidence            46899999999999999999999999999999999 66667777777754221  1358999999999998  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++.+.++++|++|||||. ....++.+.+.++|+..+++|+.+++.++++++|.+.+.. .++||++||.. ..+  .+.
T Consensus        93 ~~~~~~g~id~li~~Ag~-~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~-~~~--~~~  167 (303)
T 1yxm_A           93 STLDTFGKINFLVNNGGG-QFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPT-KAG--FPL  167 (303)
T ss_dssp             HHHHHHSCCCEEEECCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCC-TTC--CTT
T ss_pred             HHHHHcCCCCEEEECCCC-CCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCeEEEEEeec-ccC--CCc
Confidence            999999999999999997 3456677889999999999999999999999999765544 58999999987 444  578


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--cHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      ...|+++|+++..|++.++.++.+.||++|+|+||++.|++......  .+..........|.+++.+|+ |+|+.+++|
T Consensus       168 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dvA~~i~~l  246 (303)
T 1yxm_A          168 AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPE-EVSSVVCFL  246 (303)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTH-HHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHH-HHHHHHHHH
Confidence            89999999999999999999999899999999999999995322111  122223344567888888998 999999999


Q ss_pred             ccCCCCcccccEEEEcCCccccC
Q 024517          237 ISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      +++..++++|+.+.+|||.++..
T Consensus       247 ~~~~~~~~~G~~~~v~gG~~~~~  269 (303)
T 1yxm_A          247 LSPAASFITGQSVDVDGGRSLYT  269 (303)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGCB
T ss_pred             hCcccccCCCcEEEECCCeeccc
Confidence            99888899999999999988764

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=2.2e-43  Score=301.72  Aligned_cols=251  Identities=22%  Similarity=0.267  Sum_probs=169.0

Q ss_pred             CCCCCcEEEEecC--CCchHHHHHHHHHHcCCeEEEEecc------------cccH-----------HHHHHHhcccCCC
Q 024517            1 MENQAKRVLLTSD--GDEISKNIAFHLAKRGCRLVLVGNE------------RRLS-----------SVAEKMMGSLKGG   55 (266)
Q Consensus         1 m~l~~k~vlItGa--~~giG~~ia~~l~~~g~~v~~~~~~------------~~~~-----------~~~~~~~~~~~~~   55 (266)
                      |++++|++|||||  ++|||+++|++|+++|++|+++++.            ++++           ++.+++.+.....
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL   84 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence            5678999999999  8999999999999999999998732            1111           1222222110000


Q ss_pred             CCeEEEEEe------------cCC--------CchHHHHHHHHHHHHHhCCCCEEEEcCCCCC-CCCCCCCCCHHHHHHH
Q 024517           56 QPVEVVGLD------------MEE--------DREGAFDEAVDKACQILGNLDAFVHCYTYEG-KMQDPLQVGEDEFKKL  114 (266)
Q Consensus        56 ~~~~~~~~D------------~~~--------~~~~~v~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~  114 (266)
                      ....++.+|            +++        .+  +++++++++.+.+|+||+||||||... ...++.+.+.++|+.+
T Consensus        85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~--~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~  162 (319)
T 2ptg_A           85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGF--TISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAA  162 (319)
T ss_dssp             CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCC--SHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHH
T ss_pred             cccccccccccccccccccchhcccccccccCHH--HHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHH
Confidence            013455554            333        45  799999999999999999999999743 3467788999999999


Q ss_pred             HHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc-hhhHHhHHHHHHHHHHHHHHhCC-CCcEEEEEec
Q 024517          115 VKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA-AAYGACAASIHQLVRTAAMEIGK-HKIRVNGIAR  192 (266)
Q Consensus       115 ~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~-~~y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~p  192 (266)
                      +++|+.+++.++++++|+|.+   +|+||++||..+..+  .++. ..|+++|++++.|+++++.|+++ +|||||+|+|
T Consensus       163 ~~vN~~g~~~l~~~~~~~m~~---~g~Iv~isS~~~~~~--~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~P  237 (319)
T 2ptg_A          163 VSSSSYSFVSLLQHFLPLMKE---GGSALALSYIASEKV--IPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISA  237 (319)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEE---EEEEEEEEECC--------------------THHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             HhHhhHHHHHHHHHHHHHHhc---CceEEEEeccccccc--cCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEee
Confidence            999999999999999999975   489999999988766  4666 68999999999999999999985 7999999999


Q ss_pred             CcccCCCccccccc--H----HHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccC
Q 024517          193 GLHLQDEYPIAVGQ--E----RAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       193 G~v~t~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      |+|+|++.......  +    .....+....|++|+++|+ |+|+.++||+++.++++||+.|.+|||.++..
T Consensus       238 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-evA~~v~~L~s~~~~~itG~~i~vdGG~~~~~  309 (319)
T 2ptg_A          238 GPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESD-DVGRAALFLLSPLARAVTGATLYVDNGLHAMG  309 (319)
T ss_dssp             CCCC-------------------------------CCCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTCTTC-
T ss_pred             CCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHH-HHHHHHHHHhCcccCCccCCEEEECCCceeec
Confidence            99999987543210  1    1112223456888889887 99999999999988999999999999987654

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.7e-42  Score=289.65  Aligned_cols=240  Identities=19%  Similarity=0.285  Sum_probs=193.9

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      |+ |++|||||++|||+++|++|+++|++|++++ +.++++++.+++...    .++.++.+|++|.+  +++++++++.
T Consensus        20 ~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~--~v~~~~~~~~   92 (272)
T 2nwq_A           20 MS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK----TRVLPLTLDVRDRA--AMSAAVDNLP   92 (272)
T ss_dssp             -C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT----SCEEEEECCTTCHH--HHHHHHHTCC
T ss_pred             cC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC----CcEEEEEcCCCCHH--HHHHHHHHHH
Confidence            45 8999999999999999999999999999999 666666666666432    47889999999998  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCC-eEEEEecccccccCCCCCch
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGG-SIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g-~iv~iss~~~~~~~~~~~~~  160 (266)
                      +.++++|++|||||......++.+.+.++|+.++++|+.+++.+++.++|.|.+++ .| +||++||..+..+  .++..
T Consensus        93 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~~~--~~~~~  169 (272)
T 2nwq_A           93 EEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGKWP--YPGSH  169 (272)
T ss_dssp             GGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGTSC--CTTCH
T ss_pred             HHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhccC--CCCCc
Confidence            99999999999999843346788899999999999999999999999999998776 57 9999999988766  57889


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|++++.|+++++.|+++.|||||+|+||+|+|++.........  .......+.....+|+ |+|+.+++|+++ 
T Consensus       170 ~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~pe-dvA~~v~~l~s~-  245 (272)
T 2nwq_A          170 VYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQ--ARYDKTYAGAHPIQPE-DIAETIFWIMNQ-  245 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC----------------------CCCCBCHH-HHHHHHHHHHTS-
T ss_pred             hHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccch--HHHHHhhccCCCCCHH-HHHHHHHHHhCC-
Confidence            999999999999999999999999999999999999998653211110  0011111112235666 999999999986 


Q ss_pred             CCcccccEEEEcCCcc
Q 024517          241 SRYMTGTTIYVDGAQS  256 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~  256 (266)
                      ..+++|+.+.+|+|..
T Consensus       246 ~~~~~g~~i~v~~~~~  261 (272)
T 2nwq_A          246 PAHLNINSLEIMPVSQ  261 (272)
T ss_dssp             CTTEEEEEEEEEETTE
T ss_pred             CccCccceEEEeeccC
Confidence            5799999999999854

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=3e-42  Score=284.54  Aligned_cols=235  Identities=17%  Similarity=0.235  Sum_probs=190.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      |++|||||++|||+++|++|+++|++|++++ +.+++++..+++.      .++.++.+|+++.+  +++++++++.+.+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~~~~--~v~~~~~~~~~~~   72 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG------DNLYIAQLDVRNRA--AIEEMLASLPAEW   72 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------TTEEEEECCTTCHH--HHHHHHHTSCTTT
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------CceEEEEcCCCCHH--HHHHHHHHHHHhC
Confidence            6899999999999999999999999999999 5556666555552      47889999999998  9999999999899


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHH
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA  164 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~  164 (266)
                      +++|++|||||......++.+.+.++|+.++++|+.+++.+++.++|+|.+++ .|+||++||..+..+  .++...|++
T Consensus        73 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~--~~~~~~Y~a  149 (248)
T 3asu_A           73 CNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWP--YAGGNVYGA  149 (248)
T ss_dssp             CCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSC--CTTCHHHHH
T ss_pred             CCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhccC--CCCCchHHH
Confidence            99999999999843346777889999999999999999999999999998766 699999999988776  588899999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEecCccc-CCCcccccc-cHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCC
Q 024517          165 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHL-QDEYPIAVG-QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR  242 (266)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~-t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  242 (266)
                      +|++++.|+++++.|++++|||||+|+||+|+ |++...... .......   ..+.....+|+ |+|+.+++|+++ .+
T Consensus       150 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~---~~~~~~~~~p~-dvA~~v~~l~s~-~~  224 (248)
T 3asu_A          150 TKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEK---TYQNTVALTPE-DVSEAVWWVSTL-PA  224 (248)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-------------------------CCBCHH-HHHHHHHHHHHS-CT
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHH---HHhccCCCCHH-HHHHHHHHHhcC-Cc
Confidence            99999999999999999999999999999999 998643211 1111011   01111234665 999999999986 57


Q ss_pred             cccccEEEEcCCcc
Q 024517          243 YMTGTTIYVDGAQS  256 (266)
Q Consensus       243 ~~~G~~i~~dgG~~  256 (266)
                      +++|+.+.++++..
T Consensus       225 ~~~g~~i~v~~~~~  238 (248)
T 3asu_A          225 HVNINTLEMMPVTQ  238 (248)
T ss_dssp             TCCCCEEEECCTTC
T ss_pred             cceeeEEEEccccc
Confidence            99999999998743

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=4.1e-42  Score=284.88  Aligned_cols=245  Identities=18%  Similarity=0.260  Sum_probs=211.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-c-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-N-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++++|++|||||++|||++++++|+++|++|++++ + .+++++..+++...   +.++.++.+|+++.+  ++++++++
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~~~~~~~~   78 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD---GGDAAFFAADLATSE--ACQQLVDE   78 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT---TCEEEEEECCTTSHH--HHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc---CCceEEEECCCCCHH--HHHHHHHH
Confidence            36899999999999999999999999999999999 5 56677777776543   357899999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC----CCCeEEEEecccccc-cC
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK----AGGSIVFLTSIIGAE-RG  154 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~~g~iv~iss~~~~~-~~  154 (266)
                      +.+.++++|++|||||......++.+.+.++|+.++++|+.+++.+++.++|.|.+.+    ..++||++||..+.. + 
T Consensus        79 ~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-  157 (258)
T 3afn_B           79 FVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGG-  157 (258)
T ss_dssp             HHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCC-
T ss_pred             HHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCC-
Confidence            9999999999999999733456677889999999999999999999999999987532    128999999998766 4 


Q ss_pred             CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHH
Q 024517          155 LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI  234 (266)
Q Consensus       155 ~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (266)
                       .++...|+++|++++.+++.++.++++.||++|.|+||++.|++....  .+..........|.+++.+++ |+|+.+.
T Consensus       158 -~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~-dva~~~~  233 (258)
T 3afn_B          158 -GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK--TQDVRDRISNGIPMGRFGTAE-EMAPAFL  233 (258)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC--CHHHHHHHHTTCTTCSCBCGG-GTHHHHH
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc--CHHHHHHHhccCCCCcCCCHH-HHHHHHH
Confidence             578899999999999999999999999999999999999999987543  233444455667888888888 9999999


Q ss_pred             HHccCCCC-cccccEEEEcCCcc
Q 024517          235 YLISDGSR-YMTGTTIYVDGAQS  256 (266)
Q Consensus       235 ~l~s~~~~-~~~G~~i~~dgG~~  256 (266)
                      +++++... +++|+.+.+|||.+
T Consensus       234 ~l~~~~~~~~~~G~~~~v~gg~~  256 (258)
T 3afn_B          234 FFASHLASGYITGQVLDINGGQY  256 (258)
T ss_dssp             HHHCHHHHTTCCSEEEEESTTSS
T ss_pred             HHhCcchhccccCCEEeECCCcc
Confidence            99987666 89999999999974

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=7.5e-42  Score=281.20  Aligned_cols=240  Identities=26%  Similarity=0.408  Sum_probs=201.7

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      +++++|++|||||++|||++++++|+++|++|++++ +.++.++..+++       ....++.+|+++.+  +++++++ 
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~D~~~~~--~~~~~~~-   72 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-------PGIEPVCVDLGDWD--ATEKALG-   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-------TTCEEEECCTTCHH--HHHHHHT-
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------cCCCcEEecCCCHH--HHHHHHH-
Confidence            357899999999999999999999999999999998 444444433322       24567799999988  8888776 


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                         .++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.+.|.|.+++..++||++||..+..+  .++.
T Consensus        73 ---~~~~id~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~  146 (244)
T 1cyd_A           73 ---GIGPVDLLVNNAALV-IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT--FPNL  146 (244)
T ss_dssp             ---TCCCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC--CTTB
T ss_pred             ---HcCCCCEEEECCccc-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCC--CCCc
Confidence               568899999999984 4456778899999999999999999999999999987542489999999988766  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|++.++.+++++||+++.|+||++.|++.......+.+...+....|.+++.+++ |+|+.+++++++
T Consensus       147 ~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~  225 (244)
T 1cyd_A          147 ITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVE-DVVNSILFLLSD  225 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHH-HHHHHHHHHHSG
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHH-HHHHHHHHHhCc
Confidence            9999999999999999999999999999999999999997653322334444455567888888887 999999999998


Q ss_pred             CCCcccccEEEEcCCccc
Q 024517          240 GSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~  257 (266)
                      ...+++|+.+.+|||...
T Consensus       226 ~~~~~~G~~~~v~gG~~~  243 (244)
T 1cyd_A          226 RSASTSGGGILVDAGYLA  243 (244)
T ss_dssp             GGTTCCSSEEEESTTGGG
T ss_pred             hhhcccCCEEEECCCccC
Confidence            888999999999999764

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=1e-41  Score=280.47  Aligned_cols=240  Identities=26%  Similarity=0.411  Sum_probs=206.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEE-e-cccccHHHHHHHhcccCCCCCeEE-EEEecCCCchHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLV-G-NERRLSSVAEKMMGSLKGGQPVEV-VGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +|++|||||++|||++++++|+++|++|+++ + +.++.++..+++...   +.++.. +.+|+++.+  +++++++++.
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~--~~~~~~~~~~   75 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR---GSPLVAVLGANLLEAE--AATALVHQAA   75 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT---TCSCEEEEECCTTSHH--HHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCceEEEEeccCCCHH--HHHHHHHHHH
Confidence            4799999999999999999999999999998 6 555566666666543   345666 899999998  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.++|.|.+.+ .++||++||..+..+  .++...
T Consensus        76 ~~~~~~d~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~--~~~~~~  151 (245)
T 2ph3_A           76 EVLGGLDTLVNNAGIT-RDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGILG--NPGQAN  151 (245)
T ss_dssp             HHHTCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHC--CSSBHH
T ss_pred             HhcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhccC--CCCCcc
Confidence            9999999999999984 445677889999999999999999999999999998766 689999999988766  578899


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCC
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS  241 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  241 (266)
                      |+++|++++.+++.++.|+.+.||+++.|+||++.|++....  ............|.+++.+++ |+|+.+.+++++..
T Consensus       152 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~  228 (245)
T 2ph3_A          152 YVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL--PQEVKEAYLKQIPAGRFGRPE-EVAEAVAFLVSEKA  228 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHHTCTTCSCBCHH-HHHHHHHHHTSGGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc--CHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCccc
Confidence            999999999999999999998999999999999999986542  233334444566778888887 99999999999877


Q ss_pred             CcccccEEEEcCCcc
Q 024517          242 RYMTGTTIYVDGAQS  256 (266)
Q Consensus       242 ~~~~G~~i~~dgG~~  256 (266)
                      .+++|+.+.+|||..
T Consensus       229 ~~~~G~~~~v~gg~~  243 (245)
T 2ph3_A          229 GYITGQTLCVDGGLT  243 (245)
T ss_dssp             TTCCSCEEEESTTCS
T ss_pred             ccccCCEEEECCCCC
Confidence            899999999999964

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=8.1e-42  Score=313.42  Aligned_cols=231  Identities=20%  Similarity=0.248  Sum_probs=194.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      |++++|++|||||++|||+++|++|+++|++|+++++ +..+++.+++.+.   +.++..+.+|++  +  +.+++++++
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~-~~~~~~~~~i~~~---g~~~~~~~~Dv~--~--~~~~~~~~~  389 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDF-KDATKTVDEIKAA---GGEAWPDQHDVA--K--DSEAIIKNV  389 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECS-SCCHHHHHHHHHT---TCEEEEECCCHH--H--HHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeC-ccHHHHHHHHHhc---CCeEEEEEcChH--H--HHHHHHHHH
Confidence            3578999999999999999999999999999999874 2456677777543   346777778884  3  567889999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.||+||+||||||+. ...++.+.+.++|+.++++|+.++++++|+++|+|++++ .|+||++||.++..+  .++..
T Consensus       390 ~~~~G~iDiLVnNAGi~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~ag~~~--~~~~~  465 (604)
T 2et6_A          390 IDKYGTIDILVNNAGIL-RDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTSGIYG--NFGQA  465 (604)
T ss_dssp             HHHHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHSC--CTTBH
T ss_pred             HHhcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccC--CCCCh
Confidence            99999999999999984 456788999999999999999999999999999998766 699999999998877  58899


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|++||+|+.+|+++++.|++++|||||+|+||. .|+|.......+           ..+..+|+ |+|..++||+|+.
T Consensus       466 ~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~~-----------~~~~~~pe-~vA~~v~~L~s~~  532 (604)
T 2et6_A          466 NYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMREQ-----------DKNLYHAD-QVAPLLVYLGTDD  532 (604)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC--------------------CCSSCGG-GTHHHHHHTTSTT
T ss_pred             hHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCchh-----------hccCCCHH-HHHHHHHHHhCCc
Confidence            9999999999999999999999999999999995 999865321110           12235676 9999999999998


Q ss_pred             CCcccccEEEEcCCccc
Q 024517          241 SRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~  257 (266)
                      +. +||+.|.+|||...
T Consensus       533 ~~-itG~~~~vdGG~~~  548 (604)
T 2et6_A          533 VP-VTGETFEIGGGWIG  548 (604)
T ss_dssp             CC-CCSCEEEEETTEEE
T ss_pred             cC-CCCcEEEECCCeeE
Confidence            88 99999999999754

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-41  Score=280.42  Aligned_cols=230  Identities=22%  Similarity=0.276  Sum_probs=194.4

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .+++|++|||||++|||+++|++|+++|++|+++++.+   +..+++       .++.++ +|+  .+  +++++++++ 
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~---~~~~~~-------~~~~~~-~D~--~~--~~~~~~~~~-   79 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE---ELLKRS-------GHRYVV-CDL--RK--DLDLLFEKV-   79 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHT-------CSEEEE-CCT--TT--CHHHHHHHS-
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH---HHHHhh-------CCeEEE-eeH--HH--HHHHHHHHh-
Confidence            36899999999999999999999999999999998543   222222       256677 999  44  667777655 


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                         .++|++|||||. ....++.+.+.++|+..+++|+.+++.+++.++|.|++++ .++||++||..+..+  .++...
T Consensus        80 ---~~iD~lv~~Ag~-~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~~  152 (249)
T 1o5i_A           80 ---KEVDILVLNAGG-PKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISP--IENLYT  152 (249)
T ss_dssp             ---CCCSEEEECCCC-CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC--CTTBHH
T ss_pred             ---cCCCEEEECCCC-CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhcCC--CCCCch
Confidence               389999999997 4556777889999999999999999999999999998876 689999999988776  588899


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHH-HHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK-LVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      |+++|++++.|+++++.|++++||++|+|+||+++|++..... + .... .+....|.+++.+|+ |+|+.+++|+++.
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~-~~~~~~~~~~~p~~~~~~~~-dvA~~i~~l~s~~  229 (249)
T 1o5i_A          153 SNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL-S-EEKKKQVESQIPMRRMAKPE-EIASVVAFLCSEK  229 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS-C-HHHHHHHHTTSTTSSCBCHH-HHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccc-h-hhHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCcc
Confidence            9999999999999999999999999999999999999865422 1 2222 344567888888888 9999999999988


Q ss_pred             CCcccccEEEEcCCccc
Q 024517          241 SRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~  257 (266)
                      .++++|+.+.+|||.+.
T Consensus       230 ~~~~tG~~~~vdgG~~~  246 (249)
T 1o5i_A          230 ASYLTGQTIVVDGGLSK  246 (249)
T ss_dssp             GTTCCSCEEEESTTCCC
T ss_pred             ccCCCCCEEEECCCccc
Confidence            89999999999999764

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=6.6e-42  Score=314.00  Aligned_cols=230  Identities=20%  Similarity=0.231  Sum_probs=195.9

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cc---------cccHHHHHHHhcccCCCCCeEEEEEecCCCch
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE---------RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDRE   70 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   70 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.         +.++++.+++...   +.+   ..+|++|.+ 
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~---g~~---~~~d~~d~~-   76 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN---GGV---AVADYNNVL-   76 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT---TCE---EEEECCCTT-
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc---CCe---EEEEcCCHH-
Confidence            457899999999999999999999999999999987 43         4566666777543   222   236999998 


Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           71 GAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        71 ~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                       +++++++++.+.||+||+||||||+. ...++.+.+.++|+.++++|+.+++.++|+++|+|++++ .|+||++||.++
T Consensus        77 -~~~~~v~~~~~~~G~iDiLVnNAGi~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag  153 (604)
T 2et6_A           77 -DGDKIVETAVKNFGTVHVIINNAGIL-RDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAG  153 (604)
T ss_dssp             -CHHHHHHHHHHHHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHH
T ss_pred             -HHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHH
Confidence             89999999999999999999999984 556788999999999999999999999999999998876 699999999999


Q ss_pred             cccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHH
Q 024517          151 AERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLA  230 (266)
Q Consensus       151 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  230 (266)
                      ..+  .++...|++||+|+.+|+++++.|++++|||||+|+|| +.|+|...... +..    .      +..+|+ |+|
T Consensus       154 ~~~--~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~-~~~----~------~~~~pe-~vA  218 (604)
T 2et6_A          154 LYG--NFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMP-PPM----L------EKLGPE-KVA  218 (604)
T ss_dssp             HHC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSC-HHH----H------TTCSHH-HHH
T ss_pred             cCC--CCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCC-hhh----h------ccCCHH-HHH
Confidence            877  58899999999999999999999999999999999998 68877543211 111    0      124565 999


Q ss_pred             HHHHHHccCCCCcccccEEEEcCCcc
Q 024517          231 STVIYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      ..++||+++. +++||+.|.+|||..
T Consensus       219 ~~v~~L~s~~-~~itG~~~~vdgG~~  243 (604)
T 2et6_A          219 PLVLYLSSAE-NELTGQFFEVAAGFY  243 (604)
T ss_dssp             HHHHHHTSSS-CCCCSCEEEEETTEE
T ss_pred             HHHHHHhCCc-ccCCCCEEEECCCeE
Confidence            9999999988 999999999999964

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-41  Score=283.40  Aligned_cols=243  Identities=24%  Similarity=0.332  Sum_probs=208.2

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-c-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-E-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |++++|++|||||++|||++++++|+++|++|+++++ . +..++..+++...   +.++.++.+|++|.+  +++++++
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~--~~~~~~~   91 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL---GAQGVAIQADISKPS--EVVALFD   91 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTSHH--HHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc---CCcEEEEEecCCCHH--HHHHHHH
Confidence            6788999999999999999999999999999999884 3 3455555555443   357899999999998  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccc-ccCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGA-ERGLYP  157 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~  157 (266)
                      ++.++++++|++|||||.. ...++.+.+.++|+..+++|+.+++.++++++|.|++   +++||++||..+. .+  .+
T Consensus        92 ~~~~~~~~~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~~sS~~~~~~~--~~  165 (274)
T 1ja9_A           92 KAVSHFGGLDFVMSNSGME-VWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR---GGRIILTSSIAAVMTG--IP  165 (274)
T ss_dssp             HHHHHHSCEEEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE---EEEEEEECCGGGTCCS--CC
T ss_pred             HHHHHcCCCCEEEECCCCC-CCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCEEEEEcChHhccCC--CC
Confidence            9999999999999999984 4566778899999999999999999999999999873   3899999999886 44  57


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccc-----------cccHHHHHHHhhccCCCCCCCCh
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA-----------VGQERAVKLVREAAPLHRWLDVK  226 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~  226 (266)
                      +...|+++|++++.|++.++.+++..||+++.|+||++.|++....           ...++....+....|.+++.+++
T Consensus       166 ~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (274)
T 1ja9_A          166 NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPA  245 (274)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHH
Confidence            8899999999999999999999999999999999999999976521           11133334445667888888887


Q ss_pred             hhHHHHHHHHccCCCCcccccEEEEcCCc
Q 024517          227 NDLASTVIYLISDGSRYMTGTTIYVDGAQ  255 (266)
Q Consensus       227 ~dva~~~~~l~s~~~~~~~G~~i~~dgG~  255 (266)
                       |+|+.+++|+++...+++|+.+.+|||.
T Consensus       246 -dva~~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          246 -DIGRAVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             -HHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             -HHHHHHHHHhCcccccccCcEEEecCCc
Confidence             9999999999987889999999999995

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=8.5e-41  Score=274.98  Aligned_cols=233  Identities=18%  Similarity=0.264  Sum_probs=203.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-------eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-------RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDE   75 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-------~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~   75 (266)
                      ++|++|||||++|||++++++|+++|+       +|++++ +.++.+++.+++...   +.++.++.+|+++++  ++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~v~~   75 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE---GALTDTITADISDMA--DVRR   75 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT---TCEEEEEECCTTSHH--HHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc---CCeeeEEEecCCCHH--HHHH
Confidence            378999999999999999999999999       899998 556666666666532   357899999999998  9999


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC
Q 024517           76 AVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL  155 (266)
Q Consensus        76 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~  155 (266)
                      +++++.+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.++|+|.+++ .++||++||..+..+  
T Consensus        76 ~~~~~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~--  151 (244)
T 2bd0_A           76 LTTHIVERYGHIDCLVNNAGVG-RFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKA--  151 (244)
T ss_dssp             HHHHHHHHTSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC--
T ss_pred             HHHHHHHhCCCCCEEEEcCCcC-CcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhcCC--
Confidence            9999999999999999999984 556777889999999999999999999999999998766 699999999988766  


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      .++...|+++|++++.|+++++.++.+.||+++.|+||++.|++........           ..++.+|+ |+|+.+++
T Consensus       152 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-----------~~~~~~~~-dva~~~~~  219 (244)
T 2bd0_A          152 FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM-----------QALMMMPE-DIAAPVVQ  219 (244)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT-----------GGGSBCHH-HHHHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccc-----------cccCCCHH-HHHHHHHH
Confidence            5788999999999999999999999999999999999999999876532110           12456676 99999999


Q ss_pred             HccCCCCcccccEEEEcCCccc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      ++++...+++|+.+..|+|..+
T Consensus       220 l~~~~~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          220 AYLQPSRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             HHTSCTTEEEEEEEEEETTCCC
T ss_pred             HHhCCccccchheEEecccccc
Confidence            9999999999999999999877

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=1.7e-41  Score=291.86  Aligned_cols=240  Identities=14%  Similarity=0.061  Sum_probs=198.5

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHH-cCCeEEEEe-cccccH------------HHHHHHhcccCCCCCeEEEEEecCCC
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAK-RGCRLVLVG-NERRLS------------SVAEKMMGSLKGGQPVEVVGLDMEED   68 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~-~g~~v~~~~-~~~~~~------------~~~~~~~~~~~~~~~~~~~~~D~~~~   68 (266)
                      ..+|++|||||++|||+++|+.|++ +|++|++++ +.+..+            ...+.+.+.   +.++..+.+|+++.
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~---G~~a~~i~~Dvtd~  121 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK---GLYAKSINGDAFSD  121 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT---TCCEEEEESCTTSH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc---CCceEEEECCCCCH
Confidence            3589999999999999999999999 999999988 544432            123344332   46889999999999


Q ss_pred             chHHHHHHHHHHHHHhCCCCEEEEcCCCCC------------CCCCC---------------------CCCCHHHHHHHH
Q 024517           69 REGAFDEAVDKACQILGNLDAFVHCYTYEG------------KMQDP---------------------LQVGEDEFKKLV  115 (266)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~------------~~~~~---------------------~~~~~~~~~~~~  115 (266)
                      +  +++++++++.+.||+||+||||||...            ...++                     .+.+.++|+.++
T Consensus       122 ~--~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v  199 (405)
T 3zu3_A          122 E--IKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTV  199 (405)
T ss_dssp             H--HHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHH
T ss_pred             H--HHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHH
Confidence            9  999999999999999999999998731            23444                     678999999999


Q ss_pred             HccchHHH-HHHHHHHHH-HhccCCCCeEEEEecccccccCCCCCc--hhhHHhHHHHHHHHHHHHHHhCCC-CcEEEEE
Q 024517          116 KINFVAPW-FLLKAVGRR-MKESKAGGSIVFLTSIIGAERGLYPGA--AAYGACAASIHQLVRTAAMEIGKH-KIRVNGI  190 (266)
Q Consensus       116 ~~n~~~~~-~l~~~~~~~-~~~~~~~g~iv~iss~~~~~~~~~~~~--~~y~~sK~a~~~~~~~la~e~~~~-~i~v~~v  190 (266)
                      ++|..+.+ .+++++.+. |.+ + +|+||++||+.+..+  .+.+  ..|++||+++++|+|+++.||++. |||||+|
T Consensus       200 ~Vn~~~~~~~~~~~~~~~~m~~-~-gG~IVniSSi~~~~~--~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaV  275 (405)
T 3zu3_A          200 AVMGGEDWQMWIDALLDAGVLA-E-GAQTTAFTYLGEKIT--HDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVS  275 (405)
T ss_dssp             HHHSSHHHHHHHHHHHHHTCEE-E-EEEEEEEECCCCGGG--TTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEE
T ss_pred             HhhchhHHHHHHHHHHHHhhhh-C-CcEEEEEeCchhhCc--CCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEE
Confidence            99999998 788887765 443 3 599999999998877  5766  999999999999999999999999 9999999


Q ss_pred             ecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccc
Q 024517          191 ARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       191 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +||+|.|++.......+......  ..|+++.++|+ ||++.+.||+|+   +++|+.+.+|++..+
T Consensus       276 aPG~i~T~~s~~ip~~p~y~~~l--~~~mkr~G~~E-d~a~~i~~L~sd---~l~~~~~~~D~~~~~  336 (405)
T 3zu3_A          276 VLKAVVSQASSAIPMMPLYLSLL--FKVMKEKGTHE-GCIEQVYSLYKD---SLCGDSPHMDQEGRL  336 (405)
T ss_dssp             ECCCCCCHHHHTSTTHHHHHHHH--HHHHHHHTCCC-CHHHHHHHHHHH---TTSSSCCCBCTTSCE
T ss_pred             EeCCCcCchhhcCCCCcHHHHHH--HHHHhcCCCcH-HHHHHHHHHHhc---cccCCCCCcCCCcCC
Confidence            99999999876654333332222  22788999998 999999999987   688998889998654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=2.7e-40  Score=277.61  Aligned_cols=237  Identities=19%  Similarity=0.237  Sum_probs=195.2

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++      +.++.++.+|+++.+  ++++++++
T Consensus         1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~~~~--~~~~~~~~   72 (281)
T 3m1a_A            1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY------PDRAEAISLDVTDGE--RIDVVAAD   72 (281)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC------TTTEEEEECCTTCHH--HHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCCceEEEeeCCCHH--HHHHHHHH
Confidence            788999999999999999999999999999999999 666666655543      257899999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||. ....++.+.+.++|+..+++|+.+++.+++.++|.|++++ .++||++||..+..+  .++.
T Consensus        73 ~~~~~g~id~lv~~Ag~-~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~--~~~~  148 (281)
T 3m1a_A           73 VLARYGRVDVLVNNAGR-TQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQLS--FAGF  148 (281)
T ss_dssp             HHHHHSCCSEEEECCCC-EEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCC--CTTC
T ss_pred             HHHhCCCCCEEEECCCc-CCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccCC--CCCc
Confidence            99999999999999998 4556788899999999999999999999999999998876 699999999998877  6889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-----cH------HHHHHHhhccCCCCCCCChhh
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-----QE------RAVKLVREAAPLHRWLDVKND  228 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-----~~------~~~~~~~~~~~~~~~~~~~~d  228 (266)
                      ..|+++|++++.|+++++.|++++||++|+|+||+|.|+++.....     ..      ..........|.+++.+++ |
T Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d  227 (281)
T 3m1a_A          149 SAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPA-K  227 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHH-H
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHH-H
Confidence            9999999999999999999999999999999999999998653211     00      1112233456777788877 9


Q ss_pred             HHHHHHHHccCCCCcccccEEEEcC
Q 024517          229 LASTVIYLISDGSRYMTGTTIYVDG  253 (266)
Q Consensus       229 va~~~~~l~s~~~~~~~G~~i~~dg  253 (266)
                      +|++++++++...   .|..+.+.+
T Consensus       228 va~a~~~~~~~~~---~~~~~~l~s  249 (281)
T 3m1a_A          228 AAAAIRLALDTEK---TPLRLALGG  249 (281)
T ss_dssp             HHHHHHHHHHSSS---CCSEEEESH
T ss_pred             HHHHHHHHHhCCC---CCeEEecCc
Confidence            9999999997643   445555543

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.4e-40  Score=282.04  Aligned_cols=229  Identities=19%  Similarity=0.216  Sum_probs=191.4

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++...   +.++.++.+|+++.+  +++++++++.
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~d~~--~v~~~~~~~~  103 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ---GFDAHGVVCDVRHLD--EMVRLADEAF  103 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHH--HHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCceEEEEccCCCHH--HHHHHHHHHH
Confidence            7899999999999999999999999999999999 777777777777654   468999999999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.++++|++|||||.. ...++.+.+.++|+.++++|+.+++.++++++|+|.+++.+|+||++||..+..+  .++...
T Consensus       104 ~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~  180 (301)
T 3tjr_A          104 RLLGGVDVVFSNAGIV-VAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVP--NAGLGT  180 (301)
T ss_dssp             HHHSSCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC--CTTBHH
T ss_pred             HhCCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC--CCCchH
Confidence            9999999999999984 5577888999999999999999999999999999987654689999999999877  689999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccH--HHH------HHHhhccCCCCCCCChhhHHHHH
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE--RAV------KLVREAAPLHRWLDVKNDLASTV  233 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~dva~~~  233 (266)
                      |++||++++.|+++++.|+++.||+||+|+||+|+|++........  ...      ..+....+..++.+|+ |+|+.+
T Consensus       181 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-dvA~~i  259 (301)
T 3tjr_A          181 YGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSAD-DVARLT  259 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHH-HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHH-HHHHHH
Confidence            9999999999999999999999999999999999999875431100  000      0001111112345666 999999


Q ss_pred             HHHccCC
Q 024517          234 IYLISDG  240 (266)
Q Consensus       234 ~~l~s~~  240 (266)
                      +.++...
T Consensus       260 ~~~l~~~  266 (301)
T 3tjr_A          260 ADAILAN  266 (301)
T ss_dssp             HHHHHHT
T ss_pred             HHHHhcC
Confidence            9998654

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-40  Score=277.97  Aligned_cols=243  Identities=20%  Similarity=0.248  Sum_probs=196.4

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++|++|||||++|||++++++|+++|++|++++ +.++.++..+++.+... +.++.++.+|++|++  +++++++++.
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~--~v~~~~~~~~   81 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE-PQKTLFIQCDVADQQ--QLRDTFRKVV   81 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSC-GGGEEEEECCTTSHH--HHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcC-CCceEEEecCCCCHH--HHHHHHHHHH
Confidence            5789999999999999999999999999999999 55566666666644321 246889999999998  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC--CCCeEEEEecccccccCCCCCc
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK--AGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.++++|++|||||...         .++|+..+++|+.+++.+++.++|.|.+.+  ..++||++||..+..+  .++.
T Consensus        82 ~~~g~id~lv~~Ag~~~---------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~  150 (267)
T 2gdz_A           82 DHFGRLDILVNNAGVNN---------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP--VAQQ  150 (267)
T ss_dssp             HHHSCCCEEEECCCCCC---------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC--CTTC
T ss_pred             HHcCCCCEEEECCCCCC---------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCC--CCCC
Confidence            99999999999999731         356899999999999999999999997653  1589999999988766  5788


Q ss_pred             hhhHHhHHHHHHHHHHH--HHHhCCCCcEEEEEecCcccCCCcccccccHHH------HHHHhhccCCCCCCCChhhHHH
Q 024517          160 AAYGACAASIHQLVRTA--AMEIGKHKIRVNGIARGLHLQDEYPIAVGQERA------VKLVREAAPLHRWLDVKNDLAS  231 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~l--a~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~dva~  231 (266)
                      ..|+++|++++.|++++  +.|+++.|||+|+|+||+++|++..........      ........+..++.+|+ |+|+
T Consensus       151 ~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dvA~  229 (267)
T 2gdz_A          151 PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPP-LIAN  229 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHH-HHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHH-HHHH
Confidence            99999999999999985  688999999999999999999976543211111      01111111222355776 9999


Q ss_pred             HHHHHccCCCCcccccEEEEcCCccccCCCc
Q 024517          232 TVIYLISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       232 ~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      .+++|+++.  .++|+++.+|||..++-.++
T Consensus       230 ~v~~l~s~~--~~~G~~~~v~gg~~~~~~~~  258 (267)
T 2gdz_A          230 GLITLIEDD--ALNGAIMKITTSKGIHFQDY  258 (267)
T ss_dssp             HHHHHHHCT--TCSSCEEEEETTTEEEECCC
T ss_pred             HHHHHhcCc--CCCCcEEEecCCCcccccCc
Confidence            999999875  59999999999987765554

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=3.6e-41  Score=292.35  Aligned_cols=242  Identities=13%  Similarity=0.080  Sum_probs=196.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHH-cCCeEEEEe-cccccHH------------HHHHHhcccCCCCCeEEEEEecCCCc
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAK-RGCRLVLVG-NERRLSS------------VAEKMMGSLKGGQPVEVVGLDMEEDR   69 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~-~g~~v~~~~-~~~~~~~------------~~~~~~~~~~~~~~~~~~~~D~~~~~   69 (266)
                      .+|++|||||++|||+++|+.|++ +|++|++++ +.+..++            +.+++.+.   +.++..+.+|+++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~---G~~a~~i~~Dvtd~~  136 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA---GLYSKSINGDAFSDA  136 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT---TCCEEEEESCTTSHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc---CCcEEEEEecCCCHH
Confidence            589999999999999999999999 999999998 5444332            23444433   468899999999999


Q ss_pred             hHHHHHHHHHHHHHh-CCCCEEEEcCCCC------------CCCCCC---------------------CCCCHHHHHHHH
Q 024517           70 EGAFDEAVDKACQIL-GNLDAFVHCYTYE------------GKMQDP---------------------LQVGEDEFKKLV  115 (266)
Q Consensus        70 ~~~v~~~~~~~~~~~-g~id~li~~ag~~------------~~~~~~---------------------~~~~~~~~~~~~  115 (266)
                        +++++++++.+.| |+||+||||||..            ....++                     .+.+.++|+.++
T Consensus       137 --~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v  214 (422)
T 3s8m_A          137 --ARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTI  214 (422)
T ss_dssp             --HHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHH
T ss_pred             --HHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHH
Confidence              9999999999999 9999999999862            122344                     257899999999


Q ss_pred             HccchHHH-HHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc--hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEec
Q 024517          116 KINFVAPW-FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA--AAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR  192 (266)
Q Consensus       116 ~~n~~~~~-~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~--~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~p  192 (266)
                      ++|..+.+ .+++.+.+.+...+ +|+||++||+.+..+  .+.+  ..|++||+|+.+|+|+++.|++++|||||+|+|
T Consensus       215 ~Vn~~~~~~~~~~a~~~~~m~~~-gG~IVniSSi~g~~~--~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaP  291 (422)
T 3s8m_A          215 TVMGGQDWELWIDALEGAGVLAD-GARSVAFSYIGTEIT--WPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVL  291 (422)
T ss_dssp             HHHSSHHHHHHHHHHHHTTCEEE-EEEEEEEEECCCGGG--HHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred             HhhchhHHHHHHHHHHHHHHhhC-CCEEEEEeCchhhcc--CCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEc
Confidence            99999997 78888876533333 589999999988766  4655  899999999999999999999999999999999


Q ss_pred             CcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCccc-ccEEEEcCCccc
Q 024517          193 GLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMT-GTTIYVDGAQSI  257 (266)
Q Consensus       193 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~-G~~i~~dgG~~~  257 (266)
                      |+|.|++.......+.....  ...|++|.++|+ ||++.+.||+|+.- |.+ |+...+|++.-+
T Consensus       292 G~i~T~~~~~ip~~~~~~~~--~~~~m~r~G~pE-dva~~v~~L~sd~l-y~~~~~~~~~d~~~~~  353 (422)
T 3s8m_A          292 KSVVTQASAAIPVMPLYISM--VYKIMKEKGLHE-GTIEQLDRLFRERL-YRQDGQPAEVDEQNRL  353 (422)
T ss_dssp             CCCCCTTGGGSTHHHHHHHH--HHHHHHHTTCCC-CHHHHHHHHHHHTT-TCTTCCCCCCCTTSCE
T ss_pred             CCCcChhhhcCCCChHHHHH--HHhhhcCCcChH-HHHHHHHHHhcchh-hccCCCCcccCCCCCC
Confidence            99999998765433322222  233789999998 99999999998753 665 777668887655

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=3.5e-40  Score=281.47  Aligned_cols=231  Identities=20%  Similarity=0.245  Sum_probs=194.4

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe----------cccccHHHHHHHhcccCCCCCeEEEEEecCCCch
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG----------NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDRE   70 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   70 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++          +.++.++..+++...   +.   ...+|+++.+ 
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~---~~---~~~~D~~~~~-   77 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR---GG---KAVANYDSVE-   77 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT---TC---EEEEECCCGG-
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh---CC---eEEEeCCCHH-
Confidence            578899999999999999999999999999999975          234455566666543   12   2358999999 


Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           71 GAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        71 ~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                       +++++++++.+.++++|+||||||.. ...++.+.+.++|+..+++|+.+++.+++.++|+|++++ .++||++||..+
T Consensus        78 -~~~~~~~~~~~~~g~iD~lVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~~  154 (319)
T 1gz6_A           78 -AGEKLVKTALDTFGRIDVVVNNAGIL-RDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASG  154 (319)
T ss_dssp             -GHHHHHHHHHHHTSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHH
T ss_pred             -HHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhh
Confidence             99999999999999999999999984 445677889999999999999999999999999998876 699999999988


Q ss_pred             cccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHH
Q 024517          151 AERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLA  230 (266)
Q Consensus       151 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  230 (266)
                      ..+  .++...|+++|++++.|++.+++|+++.||+||+|+||++ |++..... +.....          ..+|+ |+|
T Consensus       155 ~~~--~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~-~~~~~~----------~~~p~-dvA  219 (319)
T 1gz6_A          155 IYG--NFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVM-PEDLVE----------ALKPE-YVA  219 (319)
T ss_dssp             HHC--CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGS-CHHHHH----------HSCGG-GTH
T ss_pred             ccC--CCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccC-Chhhhc----------cCCHH-HHH
Confidence            776  5788999999999999999999999999999999999998 87754422 111111          24566 999


Q ss_pred             HHHHHHccCCCCcccccEEEEcCCccc
Q 024517          231 STVIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +.++||+++ ..+++|+.|.+|||...
T Consensus       220 ~~~~~l~s~-~~~~tG~~~~v~GG~~~  245 (319)
T 1gz6_A          220 PLVLWLCHE-SCEENGGLFEVGAGWIG  245 (319)
T ss_dssp             HHHHHHTST-TCCCCSCEEEEETTEEE
T ss_pred             HHHHHHhCc-hhhcCCCEEEECCCeEE
Confidence            999999987 46899999999999654

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=1e-40  Score=276.18  Aligned_cols=233  Identities=14%  Similarity=0.144  Sum_probs=189.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCC-chHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCR-LVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEED-REGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~v~~~~~   78 (266)
                      |++++|++|||||++|||+++|++|+++|++ |+++++.+.. +..+++.+..+ +.++.++.+|++|. +  +++++++
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~-~~~~~l~~~~~-~~~~~~~~~D~~~~~~--~~~~~~~   76 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP-TALAELKAINP-KVNITFHTYDVTVPVA--ESKKLLK   76 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH-HHHHHHHHHCT-TSEEEEEECCTTSCHH--HHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH-HHHHHHHHhCC-CceEEEEEEecCCChH--HHHHHHH
Confidence            8899999999999999999999999999997 8888844322 33344443332 35789999999998 8  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC--CCCeEEEEecccccccCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK--AGGSIVFLTSIIGAERGLY  156 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~g~iv~iss~~~~~~~~~  156 (266)
                      ++.+.++++|++|||||..         +.++|+..+++|+.+++.+++.++|.|.+++  ..|+||++||..+..+  .
T Consensus        77 ~~~~~~g~id~lv~~Ag~~---------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~  145 (254)
T 1sby_A           77 KIFDQLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA--I  145 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC--C
T ss_pred             HHHHhcCCCCEEEECCccC---------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccC--C
Confidence            9999999999999999973         3467899999999999999999999997653  1489999999988766  5


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----cHHHHHHHhhccCCCCCCCChhhHHHH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKLVREAAPLHRWLDVKNDLAST  232 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~  232 (266)
                      ++...|+++|++++.|+++++.++.+.||++|+|+||+|+|++......    .+.. .......|.   .+|+ |+|+.
T Consensus       146 ~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~-dvA~~  220 (254)
T 1sby_A          146 HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRV-AELLLSHPT---QTSE-QCGQN  220 (254)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTH-HHHHTTSCC---EEHH-HHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHH-HHHHhcCCC---CCHH-HHHHH
Confidence            7889999999999999999999998789999999999999998654211    1111 222222332   3555 99999


Q ss_pred             HHHHccCCCCcccccEEEEcCCcc
Q 024517          233 VIYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       233 ~~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      ++++++   .+.+|+.+.+|||..
T Consensus       221 i~~~~~---~~~~G~~~~v~gG~~  241 (254)
T 1sby_A          221 FVKAIE---ANKNGAIWKLDLGTL  241 (254)
T ss_dssp             HHHHHH---HCCTTCEEEEETTEE
T ss_pred             HHHHHH---cCCCCCEEEEeCCce
Confidence            999996   468999999999964

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=5.6e-40  Score=268.50  Aligned_cols=229  Identities=21%  Similarity=0.294  Sum_probs=184.2

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |+..+|++|||||++|||++++++|+++|++|++++ +.+++++..+++       .++.++.+|+++.+  ++++++++
T Consensus         1 M~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~D~~~~~--~~~~~~~~   71 (234)
T 2ehd_A            1 MEGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL-------EGALPLPGDVREEG--DWARAVAA   71 (234)
T ss_dssp             ---CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-------TTCEEEECCTTCHH--HHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-------hhceEEEecCCCHH--HHHHHHHH
Confidence            777889999999999999999999999999999999 544444444333       26788999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||. ....++.+.+.++|+..+++|+.+++.+++.++|.|.+++ .++||++||..+..+  .++.
T Consensus        72 ~~~~~~~id~li~~Ag~-~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~--~~~~  147 (234)
T 2ehd_A           72 MEEAFGELSALVNNAGV-GVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKNP--FKGG  147 (234)
T ss_dssp             HHHHHSCCCEEEECCCC-CCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTTSC--CTTC
T ss_pred             HHHHcCCCCEEEECCCc-CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhcCC--CCCC
Confidence            99999999999999998 3556777889999999999999999999999999998766 689999999988766  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|+++++.|+++.||+++.|+||+++|++.....  ..    +       ...+|+ |+|+.+++++++
T Consensus       148 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~----~-------~~~~~~-dvA~~~~~l~~~  213 (234)
T 2ehd_A          148 AAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTP--GQ----A-------WKLKPE-DVAQAVLFALEM  213 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-----------------------------CCHH-HHHHHHHHHHHS
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccccc--cc----c-------CCCCHH-HHHHHHHHHhCC
Confidence            999999999999999999999999999999999999999864321  10    1       024565 999999999999


Q ss_pred             CCCcccccEEEEcCCcc
Q 024517          240 GSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~  256 (266)
                      ...+++|+.+..+++..
T Consensus       214 ~~~~~~g~~~~~~~~~~  230 (234)
T 2ehd_A          214 PGHAMVSEIELRPTRPT  230 (234)
T ss_dssp             CCSSCCCEEECCC----
T ss_pred             CcccccceEEEeecCCC
Confidence            88999999876665443

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=7.6e-41  Score=273.10  Aligned_cols=223  Identities=14%  Similarity=0.236  Sum_probs=180.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      |++|||||++|||+++|++|+++|++|++++ +.+++++..+++      +.++.++.+|+++.+  +++++++++.+  
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~--~v~~~~~~~~~--   71 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL------SNNVGYRARDLASHQ--EVEQLFEQLDS--   71 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC------SSCCCEEECCTTCHH--HHHHHHHSCSS--
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH------hhccCeEeecCCCHH--HHHHHHHHHhh--
Confidence            6899999999999999999999999999999 555555555444      257889999999988  99998887643  


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHH
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA  164 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~  164 (266)
                       .+|++|||||. ....++.+.+.++|++.+++|+.+++.+++.++|+|.+++  ++||++||..+..+  .++...|++
T Consensus        72 -~~d~lv~~Ag~-~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~~~~--~~~~~~Y~a  145 (230)
T 3guy_A           72 -IPSTVVHSAGS-GYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP--VNVVMIMSTAAQQP--KAQESTYCA  145 (230)
T ss_dssp             -CCSEEEECCCC-CCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC--CEEEEECCGGGTSC--CTTCHHHHH
T ss_pred             -cCCEEEEeCCc-CCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEEeecccCCC--CCCCchhHH
Confidence             34999999998 4567788899999999999999999999999999998765  59999999998877  688999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc-CCCCc
Q 024517          165 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS-DGSRY  243 (266)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-~~~~~  243 (266)
                      +|++++.|+++++.|++++|||||+|+||+|+|++.....          ...|.+++.+|+ |+|+.++++++ +...+
T Consensus       146 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----------~~~~~~~~~~~~-dvA~~i~~l~~~~~~~~  214 (230)
T 3guy_A          146 VKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG----------KSLDTSSFMSAE-DAALMIHGALANIGNGY  214 (230)
T ss_dssp             HHHHHHHHHHHHHHHTTTSSCEEEEEEECCC--------------------------CCCHH-HHHHHHHHHCCEETTEE
T ss_pred             HHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC----------CCCCcccCCCHH-HHHHHHHHHHhCcCCCC
Confidence            9999999999999999999999999999999999875432          223566778887 99999999987 67789


Q ss_pred             ccccEEEEcCCc
Q 024517          244 MTGTTIYVDGAQ  255 (266)
Q Consensus       244 ~~G~~i~~dgG~  255 (266)
                      ++|+.+..|...
T Consensus       215 itg~~~~~~~~~  226 (230)
T 3guy_A          215 VSDITVNREGHH  226 (230)
T ss_dssp             EEEEEEEC----
T ss_pred             ccceeecCCCCC
Confidence            999999887654

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=3.9e-41  Score=284.20  Aligned_cols=231  Identities=15%  Similarity=0.122  Sum_probs=182.0

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|+++|++|++++ +.++.++..+++      +.++.++.+|+++.+  ++++++++
T Consensus        12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~d~~--~v~~~~~~   83 (291)
T 3rd5_A           12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM------AGQVEVRELDLQDLS--SVRRFADG   83 (291)
T ss_dssp             CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS------SSEEEEEECCTTCHH--HHHHHHHT
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------cCCeeEEEcCCCCHH--HHHHHHHh
Confidence            467899999999999999999999999999999999 555555444333      358999999999998  98888877


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-----
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-----  154 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-----  154 (266)
                      +    +++|++|||||...   +..+.+.++|+.++++|+.+++.++++++|+|.+     +||++||..+..+.     
T Consensus        84 ~----~~iD~lv~nAg~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-----riv~isS~~~~~~~~~~~~  151 (291)
T 3rd5_A           84 V----SGADVLINNAGIMA---VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD-----RVVTVSSMAHWPGRINLED  151 (291)
T ss_dssp             C----CCEEEEEECCCCCS---CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE-----EEEEECCGGGTTCCCCSSC
T ss_pred             c----CCCCEEEECCcCCC---CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----heeEeechhhccCCCCccc
Confidence            6    78999999999842   3355778899999999999999999999999863     89999999876542     


Q ss_pred             ------CCCCchhhHHhHHHHHHHHHHHHHHhCCCC--cEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCCh
Q 024517          155 ------LYPGAAAYGACAASIHQLVRTAAMEIGKHK--IRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVK  226 (266)
Q Consensus       155 ------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (266)
                            ++++...|++||++++.|++.+++|++++|  |++|+|+||+|+|++.....  +... ......|.++...++
T Consensus       152 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~--~~~~-~~~~~~~~~~~~~~~  228 (291)
T 3rd5_A          152 LNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASG--RKLG-DALMSAATRVVATDA  228 (291)
T ss_dssp             TTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------------CHHH
T ss_pred             ccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccc--hHHH-HHHHHHHHHHHhCCH
Confidence                  135667999999999999999999999877  99999999999999987642  1111 222335666766644


Q ss_pred             hhHHHHHHHHccCCCCcccccEEEEcCCcc
Q 024517          227 NDLASTVIYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       227 ~dva~~~~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      +|+|+.+++|+++  ++++|+.+.+|||..
T Consensus       229 ~~~A~~~~~l~~~--~~~~G~~~~vdgG~~  256 (291)
T 3rd5_A          229 DFGARQTLYAASQ--DLPGDSFVGPRFGYL  256 (291)
T ss_dssp             HHHHHHHHHHHHS--CCCTTCEEEETTSSS
T ss_pred             HHHHHHHHHHHcC--CCCCCceeCCccccc
Confidence            5999999999988  489999999999975

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=7.1e-41  Score=275.15  Aligned_cols=223  Identities=14%  Similarity=0.138  Sum_probs=189.5

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .++|++|||||++|||++++++|+++|++|++++ +.++.+             ....++.+|+++.+  +++++++++.
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~~D~~~~~--~v~~~~~~~~   69 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-------------SASVIVKMTDSFTE--QADQVTAEVG   69 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-------------SEEEECCCCSCHHH--HHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-------------CCcEEEEcCCCCHH--HHHHHHHHHH
Confidence            4689999999999999999999999999999999 433321             13567889999988  9999999999


Q ss_pred             HHh--CCCCEEEEcCCCCCCCCCC-CCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           82 QIL--GNLDAFVHCYTYEGKMQDP-LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        82 ~~~--g~id~li~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      +.+  +++|++|||||.. ...++ .+.+.++|+..+++|+.+++.++++++|+|++   +|+||++||..+..+  .++
T Consensus        70 ~~~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~~--~~~  143 (241)
T 1dhr_A           70 KLLGDQKVDAILCVAGGW-AGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAALDG--TPG  143 (241)
T ss_dssp             HHHTTCCEEEEEECCCCC-CCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSC--CTT
T ss_pred             HHhCCCCCCEEEEccccc-CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CCEEEEECCHHHccC--CCC
Confidence            999  7999999999984 34555 67788999999999999999999999999965   489999999988776  588


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhC--CCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          159 AAAYGACAASIHQLVRTAAMEIG--KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      ...|+++|++++.|+++++.|++  ++|||||+|+||+++|++.......+          +..+..++ +|+|+.++++
T Consensus       144 ~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~----------~~~~~~~~-~~vA~~v~~l  212 (241)
T 1dhr_A          144 MIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEA----------DFSSWTPL-EFLVETFHDW  212 (241)
T ss_dssp             BHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTS----------CGGGSEEH-HHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcch----------hhccCCCH-HHHHHHHHHH
Confidence            99999999999999999999999  88999999999999999754321110          11122334 5999999999


Q ss_pred             ccCCCCcccccEEEEcCCccc
Q 024517          237 ISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +++...+++|+.+.+|||...
T Consensus       213 ~~~~~~~~~G~~~~v~g~~~~  233 (241)
T 1dhr_A          213 ITGNKRPNSGSLIQVVTTDGK  233 (241)
T ss_dssp             HTTTTCCCTTCEEEEEEETTE
T ss_pred             hcCCCcCccceEEEEeCCCCc
Confidence            999899999999999998764

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=1e-40  Score=275.87  Aligned_cols=222  Identities=14%  Similarity=0.182  Sum_probs=192.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .+|++|||||++|||+++|++|+++|++|+++++ .++.               ....+.+|++|.+  +++++++++.+
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~---------------~~~~~~~d~~d~~--~v~~~~~~~~~   83 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN---------------ADHSFTIKDSGEE--EIKSVIEKINS   83 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT---------------SSEEEECSCSSHH--HHHHHHHHHHT
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc---------------cccceEEEeCCHH--HHHHHHHHHHH
Confidence            4799999999999999999999999999999994 3322               1235778999988  99999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhh
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY  162 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y  162 (266)
                      .++++|++|||||......++.+.+.++|+..+++|+.+++.++++++|+|++   +|+||++||..+..+  .++...|
T Consensus        84 ~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~--~~~~~~Y  158 (251)
T 3orf_A           84 KSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ---GGLFVLTGASAALNR--TSGMIAY  158 (251)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSC--CTTBHHH
T ss_pred             HcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc---CCEEEEEechhhccC--CCCCchh
Confidence            99999999999998655444677889999999999999999999999999966   489999999998877  6889999


Q ss_pred             HHhHHHHHHHHHHHHHHhC--CCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC-
Q 024517          163 GACAASIHQLVRTAAMEIG--KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD-  239 (266)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~-  239 (266)
                      +++|++++.|+++++.|++  +.||+||+|+||+|+|++....          ....|.+++.+|+ |+|+.+++|+++ 
T Consensus       159 ~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~~~-dva~~i~~l~~~~  227 (251)
T 3orf_A          159 GATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKY----------MSDANFDDWTPLS-EVAEKLFEWSTNS  227 (251)
T ss_dssp             HHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHH----------CTTSCGGGSBCHH-HHHHHHHHHHHCG
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhh----------cccccccccCCHH-HHHHHHHHHhcCc
Confidence            9999999999999999987  8899999999999999875332          2233556677776 999999999998 


Q ss_pred             CCCcccccEEEEcCCcccc
Q 024517          240 GSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~  258 (266)
                      ...+++|+.+.+++|...+
T Consensus       228 ~~~~~tG~~i~v~~g~~~~  246 (251)
T 3orf_A          228 DSRPTNGSLVKFETKSKVT  246 (251)
T ss_dssp             GGCCCTTCEEEEEEETTEE
T ss_pred             cccCCcceEEEEecCCccc
Confidence            8899999999999887654

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-40  Score=272.83  Aligned_cols=223  Identities=12%  Similarity=0.108  Sum_probs=187.6

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      |++|++|||||++|||++++++|+++|++|++++ +.++.+             ....++.+|+++.+  +++++++++.
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~~D~~~~~--~~~~~~~~~~   65 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-------------DSNILVDGNKNWTE--QEQSILEQTA   65 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-------------SEEEECCTTSCHHH--HHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-------------cccEEEeCCCCCHH--HHHHHHHHHH
Confidence            3589999999999999999999999999999999 433321             13567789999988  9999999999


Q ss_pred             HHh--CCCCEEEEcCCCCCCCCCC-CCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           82 QIL--GNLDAFVHCYTYEGKMQDP-LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        82 ~~~--g~id~li~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      +.+  +++|++|||||.. ...++ .+.+.++|+..+++|+.+++.+++.++|+|.+   .|+||++||..+..+  .++
T Consensus        66 ~~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~--~~~  139 (236)
T 1ooe_A           66 SSLQGSQVDGVFCVAGGW-AGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAAAAMGP--TPS  139 (236)
T ss_dssp             HHHTTCCEEEEEECCCCC-CCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSC--CTT
T ss_pred             HHhCCCCCCEEEECCccc-CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEECchhhccC--CCC
Confidence            999  7999999999984 34555 67788999999999999999999999999965   489999999988776  688


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhC--CCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHH-H
Q 024517          159 AAAYGACAASIHQLVRTAAMEIG--KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI-Y  235 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~-~  235 (266)
                      ...|+++|++++.|+++++.|++  ++||++|+|+||+++|++.......          .+..++.+| +|+|+.++ +
T Consensus       140 ~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~~-~dvA~~i~~~  208 (236)
T 1ooe_A          140 MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN----------ADHSSWTPL-SFISEHLLKW  208 (236)
T ss_dssp             BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT----------CCGGGCBCH-HHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCC----------ccccccCCH-HHHHHHHHHH
Confidence            99999999999999999999998  8999999999999999875432111          111233444 49999998 4


Q ss_pred             HccCCCCcccccEEEEcCCccc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      |+++...+++|+.+.+|||...
T Consensus       209 l~s~~~~~~~G~~~~v~gg~~~  230 (236)
T 1ooe_A          209 TTETSSRPSSGALLKITTENGT  230 (236)
T ss_dssp             HHCGGGCCCTTCEEEEEEETTE
T ss_pred             HcCCCcccccccEEEEecCCCc
Confidence            5588889999999999999754

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-39  Score=270.89  Aligned_cols=245  Identities=15%  Similarity=0.155  Sum_probs=198.3

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++|++|||||++|||++++++|+++|++|++++ +.++++++.+++..... ..++.++.+|+++.+  +++++++++.
T Consensus        30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~--~v~~~~~~~~  106 (279)
T 1xg5_A           30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGY-PGTLIPYRCDLSNEE--DILSMFSAIR  106 (279)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-SSEEEEEECCTTCHH--HHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCC-CceEEEEEecCCCHH--HHHHHHHHHH
Confidence            6899999999999999999999999999999999 66666777666654311 146888999999998  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCC-CCeEEEEecccccccCCCCCch
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA-GGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      +.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.++|.|++.+. +++||++||..+....+.++..
T Consensus       107 ~~~g~iD~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (279)
T 1xg5_A          107 SQHSGVDICINNAGLA-RPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTH  185 (279)
T ss_dssp             HHHCCCSEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGH
T ss_pred             HhCCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCc
Confidence            9999999999999984 4567778899999999999999999999999999987652 3899999999876322256788


Q ss_pred             hhHHhHHHHHHHHHHHHHHhC--CCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          161 AYGACAASIHQLVRTAAMEIG--KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      .|+++|++++.|++.++.|++  ..||++|+|+||+|+|++.........  .......+..++.+|+ |+|+.++++++
T Consensus       186 ~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~-dvA~~i~~l~~  262 (279)
T 1xg5_A          186 FYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDP--EKAAATYEQMKCLKPE-DVAEAVIYVLS  262 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCH--HHHHHHHC---CBCHH-HHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccCh--hHHhhhcccccCCCHH-HHHHHHHHHhc
Confidence            999999999999999999998  789999999999999998533221111  1112223445667776 99999999999


Q ss_pred             CCCCcccccEEEEcCC
Q 024517          239 DGSRYMTGTTIYVDGA  254 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG  254 (266)
                      +...+.+|+....++|
T Consensus       263 ~~~~~~~g~i~i~~~~  278 (279)
T 1xg5_A          263 TPAHIQIGDIQMRPTG  278 (279)
T ss_dssp             SCTTEEEEEEEEEETT
T ss_pred             CCcceEeeeEEEccCC
Confidence            8888888875554443

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-39  Score=266.10  Aligned_cols=229  Identities=24%  Similarity=0.320  Sum_probs=194.5

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      +|++|||||++|||++++++|+++|++|+++++.+..              .++.++.+|+++.+  +++++++++ +.+
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~--------------~~~~~~~~D~~~~~--~~~~~~~~~-~~~   64 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG--------------EDLIYVEGDVTREE--DVRRAVARA-QEE   64 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS--------------SSSEEEECCTTCHH--HHHHHHHHH-HHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCccc--------------cceEEEeCCCCCHH--HHHHHHHHH-Hhh
Confidence            6899999999999999999999999999999844321              24578999999998  999999999 888


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCC----CHHHHHHHHHccchHHHHHHHHHHHHHhccC-----CCCeEEEEecccccccCC
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQV----GEDEFKKLVKINFVAPWFLLKAVGRRMKESK-----AGGSIVFLTSIIGAERGL  155 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~g~iv~iss~~~~~~~~  155 (266)
                      +++|++|||||.. ...++.+.    +.++|+..+++|+.+++.+++.+.|.|.+++     ..++||++||..+..+  
T Consensus        65 ~~~d~li~~ag~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--  141 (242)
T 1uay_A           65 APLFAVVSAAGVG-LAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG--  141 (242)
T ss_dssp             SCEEEEEECCCCC-CCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC--
T ss_pred             CCceEEEEccccc-CcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC--
Confidence            9999999999974 33444443    4459999999999999999999999998643     1249999999988766  


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCC-CCCCCChhhHHHHHH
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPL-HRWLDVKNDLASTVI  234 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~  234 (266)
                      .++...|+++|++++.+++.++.|++++||+++.|+||++.|++....  .+..........|. +++.+|+ |+|+.++
T Consensus       142 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-dva~~~~  218 (242)
T 1uay_A          142 QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL--PEKAKASLAAQVPFPPRLGRPE-EYAALVL  218 (242)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS--CHHHHHHHHTTCCSSCSCCCHH-HHHHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc--chhHHHHHHhhCCCcccCCCHH-HHHHHHH
Confidence            578899999999999999999999999999999999999999986543  23334445566777 7888887 9999999


Q ss_pred             HHccCCCCcccccEEEEcCCcccc
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      +|+++  .+++|+.+.+|||.+++
T Consensus       219 ~l~~~--~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          219 HILEN--PMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             HHHHC--TTCCSCEEEESTTCCCC
T ss_pred             HHhcC--CCCCCcEEEEcCCeecC
Confidence            99987  78999999999998764

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.8e-40  Score=279.87  Aligned_cols=192  Identities=20%  Similarity=0.228  Sum_probs=162.5

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecc------cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE------RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFD   74 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~   74 (266)
                      |++++|++|||||++|||+++|++|+++|++|+++++.      ++++++.+.+...   +.++.++.+|++|.+  +++
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~---~~~~~~~~~Dvtd~~--~v~   75 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN---DVDLRTLELDVQSQV--SVD   75 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH---TCCEEEEECCTTCHH--HHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc---CCcEEEEEeecCCHH--HHH
Confidence            88999999999999999999999999999999987632      2334444444332   468999999999998  999


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC
Q 024517           75 EAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG  154 (266)
Q Consensus        75 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~  154 (266)
                      ++++++.+.+|++|++|||||+ ....++.+.+.++|+.++++|+.+++.++++++|+|++++ .|+||++||..+....
T Consensus        76 ~~~~~~~~~~g~iD~lVnnAG~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~~~  153 (324)
T 3u9l_A           76 RAIDQIIGEDGRIDVLIHNAGH-MVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAGGT  153 (324)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCC-CBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCc-CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhccCC
Confidence            9999999999999999999998 4667888899999999999999999999999999998876 7999999999887443


Q ss_pred             CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCc
Q 024517          155 LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY  200 (266)
Q Consensus       155 ~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~  200 (266)
                       .++...|++||++++.|+++++.|+++.||+||+|+||+|.|++.
T Consensus       154 -~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          154 -PPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN  198 (324)
T ss_dssp             -CSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred             -CCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence             467889999999999999999999999999999999999997754

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=2e-39  Score=298.64  Aligned_cols=232  Identities=17%  Similarity=0.205  Sum_probs=183.7

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec----------ccccHHHHHHHhcccCCCCCeEEEEEecCCCch
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN----------ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDRE   70 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   70 (266)
                      |+++||++|||||++|||+++|++|+++|++|+++++          .+.+++..+++...   +..   ..+|+++.+ 
T Consensus        15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~---~~~---~~~D~~d~~-   87 (613)
T 3oml_A           15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA---GGE---AVADYNSVI-   87 (613)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHT---TCC---EEECCCCGG-
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHh---CCe---EEEEeCCHH-
Confidence            5689999999999999999999999999999999863          34566666777543   222   247999998 


Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           71 GAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        71 ~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                       +++++++++.+.+|+||+||||||+. ...++.+.+.++|+.++++|+.+++.++++++|+|++++ .|+||++||.++
T Consensus        88 -~~~~~~~~~~~~~g~iDiLVnnAGi~-~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~isS~a~  164 (613)
T 3oml_A           88 -DGAKVIETAIKAFGRVDILVNNAGIL-RDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSSNSG  164 (613)
T ss_dssp             -GHHHHHC----------CEECCCCCC-CCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEECCHHH
T ss_pred             -HHHHHHHHHHHHCCCCcEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCHHH
Confidence             99999999999999999999999984 557788899999999999999999999999999999876 699999999999


Q ss_pred             cccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHH
Q 024517          151 AERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLA  230 (266)
Q Consensus       151 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  230 (266)
                      ..+  .++...|+++|+|+++|+++++.|+++.||+||+|+||.+ |++...... ...          .+..+|+ |+|
T Consensus       165 ~~~--~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~-~~~----------~~~~~pe-dvA  229 (613)
T 3oml_A          165 IYG--NFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILP-DIL----------FNELKPK-LIA  229 (613)
T ss_dssp             HHC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCC-HHH----------HTTCCGG-GTH
T ss_pred             cCC--CCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccc-hhh----------hhcCCHH-HHH
Confidence            887  5889999999999999999999999999999999999974 666544322 111          1124566 999


Q ss_pred             HHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          231 STVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      ..++||+++. +++||+.|.+|||.+..
T Consensus       230 ~~v~~L~s~~-~~~tG~~i~vdGG~~~~  256 (613)
T 3oml_A          230 PVVAYLCHES-CEDNGSYIESAAGWATK  256 (613)
T ss_dssp             HHHHHTTSTT-CCCCSCEEEEETTEEEE
T ss_pred             HHHHHhcCCC-cCCCceEEEECCCeEEE
Confidence            9999999988 89999999999997754

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1e-38  Score=263.06  Aligned_cols=227  Identities=15%  Similarity=0.153  Sum_probs=187.4

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcC--CeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRG--CRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g--~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++|++|||||++|||++++++|+++|  ++|++++ +.++.+++.    +.  .+.++.++.+|+++.+  ++++++++
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~----~~--~~~~~~~~~~D~~~~~--~~~~~~~~   72 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK----SI--KDSRVHVLPLTVTCDK--SLDTFVSK   72 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH----TC--CCTTEEEEECCTTCHH--HHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHH----hc--cCCceEEEEeecCCHH--HHHHHHHH
Confidence            358999999999999999999999999  9999999 555554432    11  1368999999999998  99999999


Q ss_pred             HHHHhC--CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhcc------CC----CCeEEEEec
Q 024517           80 ACQILG--NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES------KA----GGSIVFLTS  147 (266)
Q Consensus        80 ~~~~~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~----~g~iv~iss  147 (266)
                      +.+.++  ++|++|||||...+..++.+.+.++|+..+++|+.+++.++++++|+|.++      +.    .++||++||
T Consensus        73 ~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS  152 (250)
T 1yo6_A           73 VGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISS  152 (250)
T ss_dssp             HHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECC
T ss_pred             HHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEecc
Confidence            999998  999999999985436777888999999999999999999999999999765      21    489999999


Q ss_pred             ccccccCCC-----CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCC
Q 024517          148 IIGAERGLY-----PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRW  222 (266)
Q Consensus       148 ~~~~~~~~~-----~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  222 (266)
                      ..+..+...     ++...|+++|++++.|+++++.+++++||++++|+||+|+|++...                 .++
T Consensus       153 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------~~~  215 (250)
T 1yo6_A          153 GLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-----------------NAA  215 (250)
T ss_dssp             GGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------------
T ss_pred             CccccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-----------------CCC
Confidence            988665211     5778999999999999999999999889999999999999998642                 123


Q ss_pred             CCChhhHHHHHHHHccCCCCcccccEEEEcCCc
Q 024517          223 LDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ  255 (266)
Q Consensus       223 ~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~  255 (266)
                      .+++ |+|+.+++++++...+++|+.+.+|||.
T Consensus       216 ~~~~-~~a~~~~~~~~~~~~~~~G~~~~~~g~~  247 (250)
T 1yo6_A          216 LTVE-QSTAELISSFNKLDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             ---H-HHHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred             CCHH-HHHHHHHHHHhcccccCCCeEEEECCcC
Confidence            5666 9999999999988889999999999985

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=9.5e-39  Score=272.77  Aligned_cols=232  Identities=17%  Similarity=0.223  Sum_probs=185.5

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||+++|++|+++|++|++++ +.+++++..+++..... +.++.++.+|+++.+  +++++++++
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~--~v~~~~~~~   81 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGS-GPEVMGVQLDVASRE--GFKMAADEV   81 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-GGGEEEEECCTTCHH--HHHHHHHHH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEEECCCCCHH--HHHHHHHHH
Confidence            46899999999999999999999999999999999 77777877777765421 237999999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhcc-----CCCCeEEEEecccccccCC
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES-----KAGGSIVFLTSIIGAERGL  155 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~g~iv~iss~~~~~~~~  155 (266)
                      .+.++++|+||||||. ....++.+.+.++|+.++++|+.+++.+++.++|.|.++     ...|+||++||.++..+  
T Consensus        82 ~~~~g~id~lv~nAg~-~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~--  158 (319)
T 3ioy_A           82 EARFGPVSILCNNAGV-NLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLA--  158 (319)
T ss_dssp             HHHTCCEEEEEECCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCC--
T ss_pred             HHhCCCCCEEEECCCc-CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccC--
Confidence            9999999999999998 456788889999999999999999999999999999765     12689999999999877  


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHH-H--------HhhccCCCCC-CCC
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK-L--------VREAAPLHRW-LDV  225 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~-~--------~~~~~~~~~~-~~~  225 (266)
                      .++...|++||+|++.|+++++.|+.+.||+|++|+||+|+|++............ .        .....+.... .+|
T Consensus       159 ~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  238 (319)
T 3ioy_A          159 AGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEP  238 (319)
T ss_dssp             CSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCH
Confidence            68889999999999999999999999999999999999999998765322111100 0        0011111112 345


Q ss_pred             hhhHHHHHHHHccCC
Q 024517          226 KNDLASTVIYLISDG  240 (266)
Q Consensus       226 ~~dva~~~~~l~s~~  240 (266)
                      + ++|+.++.++...
T Consensus       239 e-~vA~~~~~al~~~  252 (319)
T 3ioy_A          239 D-VIGARVIEAMKAN  252 (319)
T ss_dssp             H-HHHHHHHHHHHTT
T ss_pred             H-HHHHHHHHHHHcC
Confidence            4 9999999988654

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=1.6e-39  Score=269.31  Aligned_cols=222  Identities=19%  Similarity=0.303  Sum_probs=171.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      |++|||||++|||+++|++|+++|++|++++ +.++.+.             .   +.+|+++.+  ++++++++.   +
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------------~---~~~Dl~~~~--~v~~~~~~~---~   60 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------------D---LSTAEGRKQ--AIADVLAKC---S   60 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------C---TTSHHHHHH--HHHHHHTTC---T
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------------c---cccCCCCHH--HHHHHHHHh---C
Confidence            6899999999999999999999999999998 4433221             1   568999988  888887643   3


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc-----------
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER-----------  153 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~-----------  153 (266)
                      +++|++|||||.....        +.|+..+++|+.+++.++++++|+|.+++ .++||++||..+...           
T Consensus        61 ~~id~lv~~Ag~~~~~--------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~~~  131 (257)
T 1fjh_A           61 KGMDGLVLCAGLGPQT--------KVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALAL  131 (257)
T ss_dssp             TCCSEEEECCCCCTTC--------SSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHH
T ss_pred             CCCCEEEECCCCCCCc--------ccHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhhccccccchhhhhh
Confidence            8999999999974211        22899999999999999999999998765 699999999988621           


Q ss_pred             ---------------CCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhh-cc
Q 024517          154 ---------------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE-AA  217 (266)
Q Consensus       154 ---------------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~-~~  217 (266)
                                     .+.++...|+++|++++.|++.++.|++++||++|+|+||+|.|++................ ..
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  211 (257)
T 1fjh_A          132 EAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVP  211 (257)
T ss_dssp             HHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCC
T ss_pred             cccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhccc
Confidence                           11346789999999999999999999999999999999999999987653211111111111 46


Q ss_pred             CCCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          218 PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       218 ~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      |.+++.+|+ |+|+.+++|+++..++++|+.+.+|||.+.+
T Consensus       212 ~~~~~~~~~-dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~~  251 (257)
T 1fjh_A          212 PMGRRAEPS-EMASVIAFLMSPAASYVHGAQIVIDGGIDAV  251 (257)
T ss_dssp             STTSCCCTH-HHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             ccCCCCCHH-HHHHHHHHHhCchhcCCcCCEEEECCCcccc
Confidence            777888888 9999999999988889999999999997653

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-37  Score=258.55  Aligned_cols=230  Identities=17%  Similarity=0.224  Sum_probs=195.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcC---CeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRG---CRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAV   77 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g---~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~   77 (266)
                      ++++|++|||||++|||++++++|+++|   ++|++++ +.++.+.+ +++...   +.++.++.+|+++.+  ++++++
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~---~~~~~~~~~Dl~~~~--~v~~~~   91 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN---HSNIHILEIDLRNFD--AYDKLV   91 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHH---CTTEEEEECCTTCGG--GHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhcc---CCceEEEEecCCChH--HHHHHH
Confidence            4679999999999999999999999999   9999999 55555543 344332   358999999999999  999999


Q ss_pred             HHHHHHhC--CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhcc------CC----CCeEEEE
Q 024517           78 DKACQILG--NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES------KA----GGSIVFL  145 (266)
Q Consensus        78 ~~~~~~~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~----~g~iv~i  145 (266)
                      +++.+.++  ++|++|||||......++.+.+.++++..+++|+.+++.+++.++|+|.++      +.    .++||++
T Consensus        92 ~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~i  171 (267)
T 1sny_A           92 ADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINM  171 (267)
T ss_dssp             HHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEE
T ss_pred             HHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEE
Confidence            99999998  899999999985435677788999999999999999999999999999865      21    3899999


Q ss_pred             ecccccccCC-CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCC
Q 024517          146 TSIIGAERGL-YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLD  224 (266)
Q Consensus       146 ss~~~~~~~~-~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (266)
                      ||..+..+.. .++...|+++|++++.|++.++.++.++||++++|+||+|+|++...                 .+..+
T Consensus       172 sS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~~  234 (267)
T 1sny_A          172 SSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-----------------SAPLD  234 (267)
T ss_dssp             CCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------------TCSBC
T ss_pred             ecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------------CCCCC
Confidence            9998866521 13678899999999999999999999999999999999999998642                 12345


Q ss_pred             ChhhHHHHHHHHccCCCCcccccEEEEcCCc
Q 024517          225 VKNDLASTVIYLISDGSRYMTGTTIYVDGAQ  255 (266)
Q Consensus       225 ~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~  255 (266)
                      |+ ++|+.++++++.....++|+.+.+||+.
T Consensus       235 ~~-~~a~~~~~~~~~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          235 VP-TSTGQIVQTISKLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             HH-HHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             HH-HHHHHHHHHHHhcCcCCCCcEEccCCcC
Confidence            55 9999999999988889999999999985

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=3e-39  Score=266.10  Aligned_cols=225  Identities=19%  Similarity=0.267  Sum_probs=156.6

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||+++|++|++ |++|++++ +.++.++..+    .    .++.++.+|+++.+  + .+.+.+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~----~----~~~~~~~~D~~~~~--~-~~~~~~   68 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE----I----EGVEPIESDIVKEV--L-EEGGVD   68 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT----S----TTEEEEECCHHHHH--H-TSSSCG
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh----h----cCCcceecccchHH--H-HHHHHH
Confidence            889999999999999999999999988 99999998 4444433322    1    46889999999876  5 444445


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      ..+.++++|++|||||.. ...++.+.+.++|+.++++|+.+++.+++.++|.|++.+  |+||++||..+..+  .++.
T Consensus        69 ~~~~~~~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~--~~~~  143 (245)
T 3e9n_A           69 KLKNLDHVDTLVHAAAVA-RDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS--GCVIYINSGAGNGP--HPGN  143 (245)
T ss_dssp             GGTTCSCCSEEEECC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEC------------C
T ss_pred             HHHhcCCCCEEEECCCcC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEcCcccccC--CCCc
Confidence            556678999999999984 556777888999999999999999999999999998754  89999999998877  6889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|+++++.|+++.||+||+|+||+|.|++.......      .....+..++.+|+ |+|+.+++|++.
T Consensus       144 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------~~~~~~~~~~~~p~-dvA~~i~~l~~~  216 (245)
T 3e9n_A          144 TIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDS------QGTNFRPEIYIEPK-EIANAIRFVIDA  216 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------CCGGGSCHH-HHHHHHHHHHTS
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhh------hhcccccccCCCHH-HHHHHHHHHHcC
Confidence            99999999999999999999999999999999999999987654321      12234556677887 999999999986


Q ss_pred             CCCcccccEEEEc
Q 024517          240 GSRYMTGTTIYVD  252 (266)
Q Consensus       240 ~~~~~~G~~i~~d  252 (266)
                      ..   +|+.+.+|
T Consensus       217 ~~---~~~~~~i~  226 (245)
T 3e9n_A          217 GE---TTQITNVD  226 (245)
T ss_dssp             CT---TEEEEEEE
T ss_pred             CC---ccceeeeE
Confidence            54   44555443

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.6e-38  Score=262.93  Aligned_cols=219  Identities=19%  Similarity=0.222  Sum_probs=187.9

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++++|++|||||++|||++++++|+++|++|++++ +.+..++..+++.+.   +.++.++.+|+++.+  ++++++++
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~--~v~~~~~~  101 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL---GAKVHTFVVDCSNRE--DIYSSAKK  101 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHH--HHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc---CCeEEEEEeeCCCHH--HHHHHHHH
Confidence            567899999999999999999999999999999999 666666666666543   358999999999988  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.++|.|.+.+ .++||++||..+..+  .++.
T Consensus       102 ~~~~~g~iD~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~--~~~~  177 (272)
T 1yb1_A          102 VKAEIGDVSILVNNAGVV-YTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVS--VPFL  177 (272)
T ss_dssp             HHHHTCCCSEEEECCCCC-CCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCC--HHHH
T ss_pred             HHHHCCCCcEEEECCCcC-CCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCC--CCCc
Confidence            999999999999999984 446677788899999999999999999999999998766 689999999988665  4678


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhC---CCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIG---KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~---~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      ..|+++|++++.|++.++.|+.   +.||++++|+||+++|++....            ..|..++.+|+ |+|+.++++
T Consensus       178 ~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~------------~~~~~~~~~~~-dva~~i~~~  244 (272)
T 1yb1_A          178 LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP------------STSLGPTLEPE-EVVNRLMHG  244 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT------------HHHHCCCCCHH-HHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc------------cccccCCCCHH-HHHHHHHHH
Confidence            8999999999999999999996   6799999999999999985421            01234566776 999999999


Q ss_pred             ccCCC
Q 024517          237 ISDGS  241 (266)
Q Consensus       237 ~s~~~  241 (266)
                      +....
T Consensus       245 ~~~~~  249 (272)
T 1yb1_A          245 ILTEQ  249 (272)
T ss_dssp             HHTTC
T ss_pred             HHcCC
Confidence            97643

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=1.9e-38  Score=277.28  Aligned_cols=241  Identities=10%  Similarity=0.041  Sum_probs=194.7

Q ss_pred             CCCcEEEEecCCCchHHH--HHHHHHHcCCeEEEEe-ccccc------------HHHHHHHhcccCCCCCeEEEEEecCC
Q 024517            3 NQAKRVLLTSDGDEISKN--IAFHLAKRGCRLVLVG-NERRL------------SSVAEKMMGSLKGGQPVEVVGLDMEE   67 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~--ia~~l~~~g~~v~~~~-~~~~~------------~~~~~~~~~~~~~~~~~~~~~~D~~~   67 (266)
                      ..+|++|||||++|||++  +++.|+++|++|++++ +.+..            +.+.+.+.+.   +.++..+.+|+++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~Dvtd  134 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK---GLVAKNFIEDAFS  134 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT---TCCEEEEESCTTC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHc---CCcEEEEEeeCCC
Confidence            468999999999999999  9999999999999998 43331            3333333332   4689999999999


Q ss_pred             CchHHHHHHHHHHHHHhCCCCEEEEcCCCC------------CCCCCC---------------------CCCCHHHHHHH
Q 024517           68 DREGAFDEAVDKACQILGNLDAFVHCYTYE------------GKMQDP---------------------LQVGEDEFKKL  114 (266)
Q Consensus        68 ~~~~~v~~~~~~~~~~~g~id~li~~ag~~------------~~~~~~---------------------~~~~~~~~~~~  114 (266)
                      .+  +++++++++.+.+|+||++|||||..            +...++                     .+.+.++|+.+
T Consensus       135 ~~--~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~  212 (418)
T 4eue_A          135 NE--TKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEET  212 (418)
T ss_dssp             HH--HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHH
T ss_pred             HH--HHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHH
Confidence            99  99999999999999999999999873            022333                     35689999999


Q ss_pred             HHccchHHH-HHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc--hhhHHhHHHHHHHHHHHHHHhCC-CCcEEEEE
Q 024517          115 VKINFVAPW-FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA--AAYGACAASIHQLVRTAAMEIGK-HKIRVNGI  190 (266)
Q Consensus       115 ~~~n~~~~~-~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~--~~y~~sK~a~~~~~~~la~e~~~-~~i~v~~v  190 (266)
                      +++|..+.+ .+++.+.+.+...+ +|+||++||+.+..+  .+.+  ..|++||+|+++|+++|+.|+++ +|||||+|
T Consensus       213 ~~vn~~~~~~~~~~~l~~~~~~~~-gg~IV~iSSi~~~~~--~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V  289 (418)
T 4eue_A          213 RKVMGGEDWQEWCEELLYEDCFSD-KATTIAYSYIGSPRT--YKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVS  289 (418)
T ss_dssp             HHHHSSHHHHHHHHHHHHTTCEEE-EEEEEEEECCCCGGG--TTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEE
T ss_pred             HHHhhHHHHHHHHHHHHHHhhhcC-CcEEEEEeCchhcCC--CCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEE
Confidence            999999998 77888777644433 589999999988777  5777  99999999999999999999999 89999999


Q ss_pred             ecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCcc
Q 024517          191 ARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       191 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      +||+|.|++.......+......  ..++++.++++ ++++.+.+|+++  ...+|+.+.+|+|..
T Consensus       290 ~PG~v~T~~s~~ip~~p~y~~~~--~~~mk~~G~~E-~v~e~~~~L~sd--~~~~g~~~~~D~~~~  350 (418)
T 4eue_A          290 VNKALVTKASAYIPTFPLYAAIL--YKVMKEKNIHE-NCIMQIERMFSE--KIYSNEKIQFDDKGR  350 (418)
T ss_dssp             ECCCCCCHHHHTSTTHHHHHHHH--HHHHHHTTCCC-CHHHHHHHHHHH--TTSSSSCCCCCTTSC
T ss_pred             ECCcCcChhhhcCCCCcHHHHHH--HHHHhhcCChH-HHHHHHHHHhhc--cccCCCccccCCCce
Confidence            99999999876654333222222  22567778888 999999999987  567899999998644

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=6.3e-38  Score=268.51  Aligned_cols=237  Identities=18%  Similarity=0.197  Sum_probs=183.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcc---cCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGS---LKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++|++|||||++|||+++|++|+++|++|++++ +.+.+++..+.+...   ...+.++.++.+|+++.+  ++++++++
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~--~v~~~~~~   78 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSK--SVAAARER   78 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHH--HHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHH--HHHHHHHH
Confidence            479999999999999999999999999988877 544444433333221   111357899999999988  99999998


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.  ++++|+||||||. ....++.+.+.++|+.++++|+.+++.+++.++|+|++++ .|+||++||..+..+  .+..
T Consensus        79 ~~--~g~iD~lVnnAG~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~~~--~~~~  152 (327)
T 1jtv_A           79 VT--EGRVDVLVCNAGL-GLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMG--LPFN  152 (327)
T ss_dssp             CT--TSCCSEEEECCCC-CCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSC--CTTC
T ss_pred             Hh--cCCCCEEEECCCc-CCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccccC--CCCC
Confidence            83  5899999999998 4556777889999999999999999999999999998766 699999999988776  5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccH---------HHHH---HHhh--ccCCCCCC-C
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE---------RAVK---LVRE--AAPLHRWL-D  224 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~---------~~~~---~~~~--~~~~~~~~-~  224 (266)
                      ..|+++|++++.|+++++.|+++.||+||+|+||+|+|++........         ....   .+..  ..+.+++. +
T Consensus       153 ~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (327)
T 1jtv_A          153 DVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQN  232 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBC
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCC
Confidence            999999999999999999999999999999999999999875432211         0000   0100  11223333 5


Q ss_pred             ChhhHHHHHHHHccC---CCCcccccEE
Q 024517          225 VKNDLASTVIYLISD---GSRYMTGTTI  249 (266)
Q Consensus       225 ~~~dva~~~~~l~s~---~~~~~~G~~i  249 (266)
                      |+ |+|+.++++++.   ..++++|+.+
T Consensus       233 pe-dvA~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          233 PE-EVAEVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             HH-HHHHHHHHHHHCSSCCSEEESCSTT
T ss_pred             HH-HHHHHHHHHHcCCCCCeEEEeCchH
Confidence            65 999999999874   3567888754

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=9.1e-37  Score=259.21  Aligned_cols=222  Identities=19%  Similarity=0.154  Sum_probs=183.8

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCC-chHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEED-REGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~v~~~~~~~   80 (266)
                      +++|++|||||++|||+++|++|+++|++|++++ +.++.++..+++.+..  +.++.++.+|+++. +  +++++++++
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~--~v~~~~~~~   85 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN--HENVVFHQLDVTDPIA--TMSSLADFI   85 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--CCSEEEEECCTTSCHH--HHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CCceEEEEccCCCcHH--HHHHHHHHH
Confidence            5789999999999999999999999999999999 6677778888876553  25799999999998 8  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCC-----------------------------CCCCCCCCHHHHHHHHHccchHHHHHHHHHHH
Q 024517           81 CQILGNLDAFVHCYTYEGK-----------------------------MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR  131 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~-----------------------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  131 (266)
                      .+.++++|+||||||+...                             ..++.+.+.++|+..+++|+.+++.+++.++|
T Consensus        86 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  165 (311)
T 3o26_A           86 KTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIP  165 (311)
T ss_dssp             HHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhH
Confidence            9999999999999998532                             12445678899999999999999999999999


Q ss_pred             HHhccCCCCeEEEEecccccccCC-----------------------------------------CCCchhhHHhHHHHH
Q 024517          132 RMKESKAGGSIVFLTSIIGAERGL-----------------------------------------YPGAAAYGACAASIH  170 (266)
Q Consensus       132 ~~~~~~~~g~iv~iss~~~~~~~~-----------------------------------------~~~~~~y~~sK~a~~  170 (266)
                      +|++++ .++||++||..+..+..                                         .++...|++||++++
T Consensus       166 ~l~~~~-~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~  244 (311)
T 3o26_A          166 LLQLSD-SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLN  244 (311)
T ss_dssp             HHTTSS-SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHH
T ss_pred             hhccCC-CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHH
Confidence            998776 69999999998765410                                         135678999999999


Q ss_pred             HHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCcccccEE
Q 024517          171 QLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTI  249 (266)
Q Consensus       171 ~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  249 (266)
                      .|++.+++++.+  |+||+|+||+|.|++.....                 ..++ ++.++.+++++.......+|..+
T Consensus       245 ~~~~~la~e~~~--i~v~~v~PG~v~T~~~~~~~-----------------~~~~-~~~a~~~~~~~~~~~~~~~g~~~  303 (311)
T 3o26_A          245 AYTRVLANKIPK--FQVNCVCPGLVKTEMNYGIG-----------------NYTA-EEGAEHVVRIALFPDDGPSGFFY  303 (311)
T ss_dssp             HHHHHHHHHCTT--SEEEEECCCSBCSGGGTTCC-----------------SBCH-HHHHHHHHHHHTCCSSCCCSCEE
T ss_pred             HHHHHHHhhcCC--ceEEEecCCceecCCcCCCC-----------------CCCH-HHHHHHHHHHHhCCCCCCCceEe
Confidence            999999999864  99999999999999865421                 1234 49999999998755555555544

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=1.3e-36  Score=253.81  Aligned_cols=222  Identities=18%  Similarity=0.180  Sum_probs=185.3

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHH-cCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAK-RGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~-~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      .++|++|||||++|||++++++|++ +|++|++++ +.++.++..+++...   +.++.++.+|+++.+  +++++++++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~--~~~~~~~~~   76 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE---GLSPRFHQLDIDDLQ--SIRALRDFL   76 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT---TCCCEEEECCTTCHH--HHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc---CCeeEEEECCCCCHH--HHHHHHHHH
Confidence            4689999999999999999999999 999999999 556666677776543   357899999999988  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCC-HHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc--C---
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVG-EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER--G---  154 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~--~---  154 (266)
                      .+.++++|+||||||... ... ...+ .++++..+++|+.+++.+++.++|+|.+   .++||++||..+..+  .   
T Consensus        77 ~~~~g~id~li~~Ag~~~-~~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~~sS~~~~~~~~~~~~  151 (276)
T 1wma_A           77 RKEYGGLDVLVNNAGIAF-KVA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMSVRALKSCSP  151 (276)
T ss_dssp             HHHHSSEEEEEECCCCCC-CTT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHHHHTSCH
T ss_pred             HHhcCCCCEEEECCcccc-cCC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCC---CCEEEEECChhhhcccccCCh
Confidence            999999999999999743 222 3334 5899999999999999999999999865   479999999877532  0   


Q ss_pred             -----------------------------------CCCCchhhHHhHHHHHHHHHHHHHHhCC----CCcEEEEEecCcc
Q 024517          155 -----------------------------------LYPGAAAYGACAASIHQLVRTAAMEIGK----HKIRVNGIARGLH  195 (266)
Q Consensus       155 -----------------------------------~~~~~~~y~~sK~a~~~~~~~la~e~~~----~~i~v~~v~pG~v  195 (266)
                                                         ..+ ...|+++|++++.|++.++.++.+    .||++++|+||+|
T Consensus       152 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v  230 (276)
T 1wma_A          152 ELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWP-SSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWV  230 (276)
T ss_dssp             HHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCC-SCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSB
T ss_pred             hHHhhccccccchhhhhhhhhhhhhhhcccccccCCCc-cchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCcc
Confidence                                               012 378999999999999999999987    7999999999999


Q ss_pred             cCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC--CCcccccEEEEcCC
Q 024517          196 LQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG--SRYMTGTTIYVDGA  254 (266)
Q Consensus       196 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~--~~~~~G~~i~~dgG  254 (266)
                      .|++...                 .++.+|+ |+|+.+++|++..  .++++|+.|. |++
T Consensus       231 ~t~~~~~-----------------~~~~~~~-~~a~~~~~l~~~~~~~~~~~G~~~~-~~~  272 (276)
T 1wma_A          231 RTDMAGP-----------------KATKSPE-EGAETPVYLALLPPDAEGPHGQFVS-EKR  272 (276)
T ss_dssp             CSTTTCT-----------------TCSBCHH-HHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             ccCcCCc-----------------cccCChh-HhhhhHhhhhcCcccccccCceEec-cCc
Confidence            9998643                 1345666 9999999999854  3699999987 554

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=3e-35  Score=247.55  Aligned_cols=218  Identities=22%  Similarity=0.261  Sum_probs=180.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|||++++++|+++|++|++++ +.+++++..+++.+..  +.++.++.+|++|.+  +++++++++
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~--~v~~~~~~~  100 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG--AASAHYIAGTMEDMT--FAEQFVAQA  100 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT--CSEEEEEECCTTCHH--HHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC--CCceEEEeCCCCCHH--HHHHHHHHH
Confidence            36799999999999999999999999999999999 6666777766665431  136889999999988  999999999


Q ss_pred             HHHhCCCCEEEEc-CCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           81 CQILGNLDAFVHC-YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        81 ~~~~g~id~li~~-ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      .+.++++|++||| +|. .. .++.+.+.++++.++++|+.+++.++++++|.|.+.  .|+||++||..+..+  .++.
T Consensus       101 ~~~~g~iD~li~naag~-~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~--~~~~  174 (286)
T 1xu9_A          101 GKLMGGLDMLILNHITN-TS-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGKVA--YPMV  174 (286)
T ss_dssp             HHHHTSCSEEEECCCCC-CC-CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGTSC--CTTC
T ss_pred             HHHcCCCCEEEECCccC-CC-CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC--CCEEEEECCcccccC--CCCc
Confidence            9999999999999 565 33 345567899999999999999999999999998764  489999999988766  5888


Q ss_pred             hhhHHhHHHHHHHHHHHHHHh--CCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          160 AAYGACAASIHQLVRTAAMEI--GKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~--~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      ..|+++|++++.|+++++.|+  ...||+++.|+||+++|++.......         . ......+|+ |+|+.++..+
T Consensus       175 ~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~---------~-~~~~~~~~~-~vA~~i~~~~  243 (286)
T 1xu9_A          175 AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG---------I-VHMQAAPKE-ECALEIIKGG  243 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCG---------G-GGGGCBCHH-HHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhccc---------c-ccCCCCCHH-HHHHHHHHHH
Confidence            999999999999999999999  57799999999999999875432110         0 011224454 9999999988


Q ss_pred             cCC
Q 024517          238 SDG  240 (266)
Q Consensus       238 s~~  240 (266)
                      ...
T Consensus       244 ~~~  246 (286)
T 1xu9_A          244 ALR  246 (286)
T ss_dssp             HTT
T ss_pred             hcC
Confidence            653

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.8e-37  Score=292.54  Aligned_cols=243  Identities=15%  Similarity=0.215  Sum_probs=199.9

Q ss_pred             CCCCCcEEEEecCCCc-hHHHHHHHHHHcCCeEEEEe--cccccHHHHHHHhcccC-CCCCeEEEEEecCCCchHHHHHH
Q 024517            1 MENQAKRVLLTSDGDE-ISKNIAFHLAKRGCRLVLVG--NERRLSSVAEKMMGSLK-GGQPVEVVGLDMEEDREGAFDEA   76 (266)
Q Consensus         1 m~l~~k~vlItGa~~g-iG~~ia~~l~~~g~~v~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~v~~~   76 (266)
                      |++++|++|||||++| ||+++|++|+++|++|++++  +.+++++..+++.+..+ .+.++.++.+|+++.+  +++++
T Consensus       472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~e--sVeaL  549 (1688)
T 2pff_A          472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQ--DVEAL  549 (1688)
T ss_dssp             CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTT--HHHHH
T ss_pred             cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHH--HHHHH
Confidence            5688999999999998 99999999999999999984  45566667777654432 1457899999999999  99999


Q ss_pred             HHHHHHH-----hC-CCCEEEEcCCCCCCCC-CCCCCC--HHHHHHHHHccchHHHHHHHHH--HHHHhccCCCCeEEEE
Q 024517           77 VDKACQI-----LG-NLDAFVHCYTYEGKMQ-DPLQVG--EDEFKKLVKINFVAPWFLLKAV--GRRMKESKAGGSIVFL  145 (266)
Q Consensus        77 ~~~~~~~-----~g-~id~li~~ag~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~~g~iv~i  145 (266)
                      ++++.+.     +| +||+||||||+. ... ++.+.+  .++|+.++++|+.+++.+++.+  .|.|.+++ +|+||++
T Consensus       550 Ve~I~e~~~~~GfG~~IDILVNNAGI~-~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krg-gGrIVnI  627 (1688)
T 2pff_A          550 IEFIYDTEKNGGLGWDLDAIIPFAAIP-EQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP-AQVILPM  627 (1688)
T ss_dssp             HHHHHSCTTSSSCCCCCCEEECCCCCC-CCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSC-EEECCCC
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcC-CCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCC-CCEEEEE
Confidence            9999988     77 999999999984 444 677777  8999999999999999999998  78887655 5899999


Q ss_pred             ecccccccCCCCCchhhHHhHHHHHHH-HHHHHHHhCCCCcEEEEEecCccc-CCCcccccccHHHHHHHhhccCCCCCC
Q 024517          146 TSIIGAERGLYPGAAAYGACAASIHQL-VRTAAMEIGKHKIRVNGIARGLHL-QDEYPIAVGQERAVKLVREAAPLHRWL  223 (266)
Q Consensus       146 ss~~~~~~~~~~~~~~y~~sK~a~~~~-~~~la~e~~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (266)
                      ||.++..+    +...|++||+|+++| .+.++.++++. |+||+|+||+|+ |++....   + .........|. +..
T Consensus       628 SSiAG~~G----g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~---e-~~~~~l~~ipl-R~~  697 (1688)
T 2pff_A          628 SPNHGTFG----GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN---N-IIAEGIEKMGV-RTF  697 (1688)
T ss_dssp             CSCTTTSS----CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTT---T-TCSTTTSSSSC-CCC
T ss_pred             EChHhccC----CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCc---h-HHHHHHHhCCC-CCC
Confidence            99887654    567899999999999 88888888877 999999999999 7876431   0 11112233444 456


Q ss_pred             CChhhHHHHHHHHccCC-CCcccccEEEEc--CCcccc
Q 024517          224 DVKNDLASTVIYLISDG-SRYMTGTTIYVD--GAQSIT  258 (266)
Q Consensus       224 ~~~~dva~~~~~l~s~~-~~~~~G~~i~~d--gG~~~~  258 (266)
                      +|+ |+|+.+++|+++. .++++|+.+.+|  ||....
T Consensus       698 sPE-EVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~  734 (1688)
T 2pff_A          698 SQK-EMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFV  734 (1688)
T ss_dssp             CCC-TTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGS
T ss_pred             CHH-HHHHHHHHHhCCCccccccCcEEEEEcCCCeeec
Confidence            787 9999999999987 689999999876  997654

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=3.5e-36  Score=296.58  Aligned_cols=243  Identities=15%  Similarity=0.199  Sum_probs=196.3

Q ss_pred             CCCCCcEEEEecCCCc-hHHHHHHHHHHcCCeEEEEe--cccccHHHHHHHhcccC-CCCCeEEEEEecCCCchHHHHHH
Q 024517            1 MENQAKRVLLTSDGDE-ISKNIAFHLAKRGCRLVLVG--NERRLSSVAEKMMGSLK-GGQPVEVVGLDMEEDREGAFDEA   76 (266)
Q Consensus         1 m~l~~k~vlItGa~~g-iG~~ia~~l~~~g~~v~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~v~~~   76 (266)
                      |++++|++|||||++| ||+++|++|+++|++|++++  +.+++++..+++.+.++ .+.++.++.||+++.+  +++++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~--sV~al  748 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQ--DVEAL  748 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHH--HHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHH--HHHHH
Confidence            5688999999999998 99999999999999999985  44566666666644332 1457899999999999  99999


Q ss_pred             HHHHHHH-----hC-CCCEEEEcCCCCCCCC-CCCCCC--HHHHHHHHHccchHHHHHHHHH--HHHHhccCCCCeEEEE
Q 024517           77 VDKACQI-----LG-NLDAFVHCYTYEGKMQ-DPLQVG--EDEFKKLVKINFVAPWFLLKAV--GRRMKESKAGGSIVFL  145 (266)
Q Consensus        77 ~~~~~~~-----~g-~id~li~~ag~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~~g~iv~i  145 (266)
                      ++++.+.     +| +||+||||||+. ... ++.+.+  .++|+.++++|+.+++.+++.+  .|.|.+++ .|+||++
T Consensus       749 v~~i~~~~~~~G~G~~LDiLVNNAGi~-~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~-~G~IVnI  826 (1887)
T 2uv8_A          749 IEFIYDTEKNGGLGWDLDAIIPFAAIP-EQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP-AQVILPM  826 (1887)
T ss_dssp             HHHHHSCTTTTSCCCCCSEEEECCCCC-CCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCC-EEEEEEE
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcC-CCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCC-CCEEEEE
Confidence            9999988     66 999999999984 444 777788  8999999999999999999988  67887654 5899999


Q ss_pred             ecccccccCCCCCchhhHHhHHHHHHH-HHHHHHHhCCCCcEEEEEecCccc-CCCcccccccHHHHHHHhhccCCCCCC
Q 024517          146 TSIIGAERGLYPGAAAYGACAASIHQL-VRTAAMEIGKHKIRVNGIARGLHL-QDEYPIAVGQERAVKLVREAAPLHRWL  223 (266)
Q Consensus       146 ss~~~~~~~~~~~~~~y~~sK~a~~~~-~~~la~e~~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (266)
                      ||..+..+    +...|+++|+++++| ++.++.++++. |+||+|+||+|+ |+++.......    ......|. +..
T Consensus       827 SS~ag~~g----g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~~~~~----~~~~~~pl-r~~  896 (1887)
T 2uv8_A          827 SPNHGTFG----GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNIIA----EGIEKMGV-RTF  896 (1887)
T ss_dssp             CSCTTCSS----CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----CCTTH----HHHHTTSC-CCE
T ss_pred             cChHhccC----CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccchhHH----HHHHhcCC-CCC
Confidence            99987654    567899999999999 99999999887 999999999999 78865311111    12233454 555


Q ss_pred             CChhhHHHHHHHHccCC-CCcccccEEEEc--CCcccc
Q 024517          224 DVKNDLASTVIYLISDG-SRYMTGTTIYVD--GAQSIT  258 (266)
Q Consensus       224 ~~~~dva~~~~~l~s~~-~~~~~G~~i~~d--gG~~~~  258 (266)
                      +|+ |+|+.++||+++. .++++|+.+.+|  ||....
T Consensus       897 sPE-EVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~  933 (1887)
T 2uv8_A          897 SQK-EMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFV  933 (1887)
T ss_dssp             EHH-HHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTS
T ss_pred             CHH-HHHHHHHHHhCCCccccccCcEEEEECCCCeecc
Confidence            676 9999999999987 679999999875  997654

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=4.4e-35  Score=288.32  Aligned_cols=243  Identities=14%  Similarity=0.197  Sum_probs=197.1

Q ss_pred             CCCCCcEEEEecCCCc-hHHHHHHHHHHcCCeEEEEe-c-ccccHHHHHHHhcccC-CCCCeEEEEEecCCCchHHHHHH
Q 024517            1 MENQAKRVLLTSDGDE-ISKNIAFHLAKRGCRLVLVG-N-ERRLSSVAEKMMGSLK-GGQPVEVVGLDMEEDREGAFDEA   76 (266)
Q Consensus         1 m~l~~k~vlItGa~~g-iG~~ia~~l~~~g~~v~~~~-~-~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~v~~~   76 (266)
                      |++++|++|||||++| ||+++|++|+++|++|++++ + .+.+++..+++..... .+.++.++.||+++.+  +++++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~e--sV~al  725 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQ--DVEAL  725 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHH--HHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHH--HHHHH
Confidence            5788999999999999 99999999999999999986 4 4455555555543332 2467899999999999  99999


Q ss_pred             HHHHHHH---hC-CCCEEEEcCCCCCCCC-CCCCCC--HHHHHHHHHccchHHHHHHHH--HHHHHhccCCCCeEEEEec
Q 024517           77 VDKACQI---LG-NLDAFVHCYTYEGKMQ-DPLQVG--EDEFKKLVKINFVAPWFLLKA--VGRRMKESKAGGSIVFLTS  147 (266)
Q Consensus        77 ~~~~~~~---~g-~id~li~~ag~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~~~~~~~~g~iv~iss  147 (266)
                      ++++.+.   +| +||+||||||+. ... ++.+.+  .++|+.++++|+.+++.+++.  +++.|.+++ .|+||++||
T Consensus       726 v~~i~~~~~~~G~~IDiLVnNAGi~-~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~-~G~IVnISS  803 (1878)
T 2uv9_A          726 VNYIYDTKNGLGWDLDYVVPFAAIP-ENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRP-AQVILPLSP  803 (1878)
T ss_dssp             HHHHHCSSSSCCCCCSEEEECCCCC-CTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCC-EEECCEECS
T ss_pred             HHHHHHhhcccCCCCcEEEeCcccc-cCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCC-CCEEEEEcc
Confidence            9999988   88 999999999984 444 778888  899999999999999999987  678887654 589999999


Q ss_pred             ccccccCCCCCchhhHHhHHHHHHHHHHHHH-HhCCCCcEEEEEecCccc-CCCcccccccHHHHHHHhhccCCCCCCCC
Q 024517          148 IIGAERGLYPGAAAYGACAASIHQLVRTAAM-EIGKHKIRVNGIARGLHL-QDEYPIAVGQERAVKLVREAAPLHRWLDV  225 (266)
Q Consensus       148 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~-e~~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (266)
                      .++..+    +...|+++|+++++|++.++. ++++. |+||+|+||+++ |++....    ..........|. +..+|
T Consensus       804 ~ag~~g----g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~----~~~~~~~~~~pl-r~~sP  873 (1878)
T 2uv9_A          804 NHGTFG----NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSAN----NLVAEGVEKLGV-RTFSQ  873 (1878)
T ss_dssp             CSSSSS----CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHH----HHTHHHHHTTTC-CCBCH
T ss_pred             hhhccC----CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccc----hhhHHHHHhcCC-CCCCH
Confidence            987654    467899999999999987655 47766 999999999999 9987541    111222334554 44567


Q ss_pred             hhhHHHHHHHHccCCC-CcccccEEEE--cCCcccc
Q 024517          226 KNDLASTVIYLISDGS-RYMTGTTIYV--DGAQSIT  258 (266)
Q Consensus       226 ~~dva~~~~~l~s~~~-~~~~G~~i~~--dgG~~~~  258 (266)
                      + |+|+.+++|+++.. +++||+.+.+  |||....
T Consensus       874 e-EVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~  908 (1878)
T 2uv9_A          874 Q-EMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFI  908 (1878)
T ss_dssp             H-HHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGC
T ss_pred             H-HHHHHHHHHhCCcccccccCcEEEEEcCCCcccc
Confidence            6 99999999999876 7999999987  5997654

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=7.7e-34  Score=226.87  Aligned_cols=200  Identities=13%  Similarity=0.152  Sum_probs=170.1

Q ss_pred             Cc-EEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AK-RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k-~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +| ++|||||+++||++++++|+ +|++|+++++...                   .+.+|+++++  +++++++++   
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~--~~~~~~~~~---   56 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNID--SIKKMYEQV---   56 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHH--HHHHHHHHH---
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHH--HHHHHHHHh---
Confidence            45 79999999999999999999 9999999984331                   4678999988  888888764   


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhH
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG  163 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~  163 (266)
                       +++|++|||||. ....++.+.+.++|+..+++|+.+++.+++.+.|.|.+   +++||++||..+..+  .++...|+
T Consensus        57 -~~~d~vi~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~~sS~~~~~~--~~~~~~Y~  129 (202)
T 3d7l_A           57 -GKVDAIVSATGS-ATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND---KGSFTLTTGIMMEDP--IVQGASAA  129 (202)
T ss_dssp             -CCEEEEEECCCC-CCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE---EEEEEEECCGGGTSC--CTTCHHHH
T ss_pred             -CCCCEEEECCCC-CCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc---CCEEEEEcchhhcCC--CCccHHHH
Confidence             789999999997 35567778899999999999999999999999999864   489999999987666  57889999


Q ss_pred             HhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCc
Q 024517          164 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY  243 (266)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  243 (266)
                      ++|++++.+++.++.|+ +.||+++.|+||++.|++..           ..+..|..++.+++ |+|+.++++++   .+
T Consensus       130 ~sK~~~~~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~-----------~~~~~~~~~~~~~~-dva~~~~~~~~---~~  193 (202)
T 3d7l_A          130 MANGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWDK-----------LEPFFEGFLPVPAA-KVARAFEKSVF---GA  193 (202)
T ss_dssp             HHHHHHHHHHHHHTTSC-STTCEEEEEEECCBGGGHHH-----------HGGGSTTCCCBCHH-HHHHHHHHHHH---SC
T ss_pred             HHHHHHHHHHHHHHHHc-cCCeEEEEEecCccCCchhh-----------hhhhccccCCCCHH-HHHHHHHHhhh---cc
Confidence            99999999999999998 78999999999999988632           11233445566776 99999998883   56


Q ss_pred             ccccEEEEc
Q 024517          244 MTGTTIYVD  252 (266)
Q Consensus       244 ~~G~~i~~d  252 (266)
                      ++|+.+.+|
T Consensus       194 ~~G~~~~vd  202 (202)
T 3d7l_A          194 QTGESYQVY  202 (202)
T ss_dssp             CCSCEEEEC
T ss_pred             ccCceEecC
Confidence            899999987

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=3.1e-34  Score=236.79  Aligned_cols=223  Identities=17%  Similarity=0.265  Sum_probs=177.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      |++|||||+++||++++++|+++|++|++++ +.++.+.                .+.+|+++.+  ++++++++.   .
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------------~~~~D~~~~~--~~~~~~~~~---~   60 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA----------------DLSTPGGRET--AVAAVLDRC---G   60 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------------CTTSHHHHHH--HHHHHHHHH---T
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc----------------cccCCcccHH--HHHHHHHHc---C
Confidence            5899999999999999999999999999998 4333211                1557999888  888887743   3


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC---------
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL---------  155 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~---------  155 (266)
                      +++|++|||||....        .++++..+++|+.+++.+++.+.+.|.+.+ .++||++||..+..+..         
T Consensus        61 ~~~d~vi~~Ag~~~~--------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~  131 (255)
T 2dkn_A           61 GVLDGLVCCAGVGVT--------AANSGLVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAATQPGAAELPMVEAM  131 (255)
T ss_dssp             TCCSEEEECCCCCTT--------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSTTGGGCHHHHHH
T ss_pred             CCccEEEECCCCCCc--------chhHHHHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEeccccccccccccchhhhh
Confidence            789999999997421        123889999999999999999999998765 58999999988765420         


Q ss_pred             ---------------CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhcc--C
Q 024517          156 ---------------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAA--P  218 (266)
Q Consensus       156 ---------------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~--~  218 (266)
                                     .++...|+++|++++.+++.++.++.+.||+++.|+||.+.|++.......... .......  |
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~-~~~~~~~~~~  210 (255)
T 2dkn_A          132 LAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRY-GESTRRFVAP  210 (255)
T ss_dssp             HHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTT-HHHHHSCCCT
T ss_pred             cccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhh-HHHHHHHHHH
Confidence                           046678999999999999999999988899999999999999876543111111 1111222  6


Q ss_pred             CCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCC
Q 024517          219 LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       219 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                      .+++.+++ |+|+.+++++++...+++|+.+.+|||..++..
T Consensus       211 ~~~~~~~~-dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~  251 (255)
T 2dkn_A          211 LGRGSEPR-EVAEAIAFLLGPQASFIHGSVLFVDGGMDALMR  251 (255)
T ss_dssp             TSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHC
T ss_pred             hcCCCCHH-HHHHHHHHHhCCCcccceeeEEEecCCeEeeee
Confidence            66778887 999999999988777899999999999876643

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=2.7e-32  Score=218.56  Aligned_cols=199  Identities=19%  Similarity=0.257  Sum_probs=163.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      |++|||||++|||++++++|+++  +|++++ +.++.++..+++.       . .++.+|++|++  ++++++++    +
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~-------~-~~~~~D~~~~~--~~~~~~~~----~   64 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG-------A-RALPADLADEL--EAKALLEE----A   64 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT-------C-EECCCCTTSHH--HHHHHHHH----H
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc-------C-cEEEeeCCCHH--HHHHHHHh----c
Confidence            58999999999999999999998  999998 5455555444442       2 78889999988  99988876    7


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHH
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA  164 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~  164 (266)
                      +++|++|||||. ....++.+.+.++|+..+++|+.+++.+++++    .+.+ .++||++||..+..+  .++...|++
T Consensus        65 ~~id~vi~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~iv~~sS~~~~~~--~~~~~~Y~~  136 (207)
T 2yut_A           65 GPLDLLVHAVGK-AGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQK-GARAVFFGAYPRYVQ--VPGFAAYAA  136 (207)
T ss_dssp             CSEEEEEECCCC-CCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEE-EEEEEEECCCHHHHS--STTBHHHHH
T ss_pred             CCCCEEEECCCc-CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcC-CcEEEEEcChhhccC--CCCcchHHH
Confidence            899999999998 35566777888999999999999999999988    2333 589999999988766  578899999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCC
Q 024517          165 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS  241 (266)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  241 (266)
                      +|++++.+++.++.+++++||+++.|+||++.|++...            ...|..++.+++ |+|+.++++++.+.
T Consensus       137 sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~------------~~~~~~~~~~~~-dva~~~~~~~~~~~  200 (207)
T 2yut_A          137 AKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAP------------LGGPPKGALSPE-EAARKVLEGLFREP  200 (207)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGG------------GTSCCTTCBCHH-HHHHHHHHHHC--C
T ss_pred             HHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccc------------cCCCCCCCCCHH-HHHHHHHHHHhCCC
Confidence            99999999999999999999999999999999987432            113456677777 99999999997654

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.97  E-value=3.8e-31  Score=239.00  Aligned_cols=218  Identities=17%  Similarity=0.160  Sum_probs=175.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCe-EEEE-e-c-------------ccccHHHHHHHhcccCCCCCeEEEEEecCC
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCR-LVLV-G-N-------------ERRLSSVAEKMMGSLKGGQPVEVVGLDMEE   67 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~-v~~~-~-~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   67 (266)
                      +++++|||||++|||+++|++|+++|++ |+++ + +             .+..+++.+++.+.   +.++.++.||++|
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~---g~~v~~~~~Dvtd  326 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL---GATATVVTCDLTD  326 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH---TCEEEEEECCTTS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc---CCEEEEEECCCCC
Confidence            5799999999999999999999999997 7777 7 4             24556677777654   5689999999999


Q ss_pred             CchHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEec
Q 024517           68 DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTS  147 (266)
Q Consensus        68 ~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss  147 (266)
                      .+  +++++++++. .+++||+||||||+. ...++.+.+.++|+.++++|+.+++++.+.+.+.|++++..+.||++||
T Consensus       327 ~~--~v~~~~~~i~-~~g~id~vVh~AGv~-~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS  402 (525)
T 3qp9_A          327 AE--AAARLLAGVS-DAHPLSAVLHLPPTV-DSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSS  402 (525)
T ss_dssp             HH--HHHHHHHTSC-TTSCEEEEEECCCCC-CCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEE
T ss_pred             HH--HHHHHHHHHH-hcCCCcEEEECCcCC-CCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECC
Confidence            99  9999999988 789999999999984 5578889999999999999999999999999999876543489999999


Q ss_pred             ccccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChh
Q 024517          148 IIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKN  227 (266)
Q Consensus       148 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (266)
                      .++..+  .++...|+++|++++.|+    .++...||++++|+||+++|+|.....    ....+.. ... +..+|+ 
T Consensus       403 ~a~~~g--~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~~----~~~~~~~-~g~-~~l~pe-  469 (525)
T 3qp9_A          403 VAAIWG--GAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEGA----TGERLRR-LGL-RPLAPA-  469 (525)
T ss_dssp             GGGTTC--CTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSSH----HHHHHHH-TTB-CCBCHH-
T ss_pred             HHHcCC--CCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccchh----hHHHHHh-cCC-CCCCHH-
Confidence            999887  589999999999998875    566778999999999999999874321    1111111 111 234555 


Q ss_pred             hHHHHHHHHccCCC
Q 024517          228 DLASTVIYLISDGS  241 (266)
Q Consensus       228 dva~~~~~l~s~~~  241 (266)
                      ++++.+.++++...
T Consensus       470 e~a~~l~~~l~~~~  483 (525)
T 3qp9_A          470 TALTALDTALGHGD  483 (525)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhCCC
Confidence            99999999997654

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.97  E-value=1.4e-31  Score=274.98  Aligned_cols=245  Identities=13%  Similarity=0.110  Sum_probs=180.3

Q ss_pred             CCCcEEEEecCCCc-hHHHHHHHHHHcCCeEEEEe-cccc-----cHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHH
Q 024517            3 NQAKRVLLTSDGDE-ISKNIAFHLAKRGCRLVLVG-NERR-----LSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDE   75 (266)
Q Consensus         3 l~~k~vlItGa~~g-iG~~ia~~l~~~g~~v~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~   75 (266)
                      ++||++|||||++| ||+++|+.|+++|++|++++ +.+.     ++++.+++...   +.++..+.+|+++.+  ++++
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~---G~~~~~v~~Dvtd~~--~v~~ 2208 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARF---DATLWVVPANMASYS--DIDK 2208 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCT---TCEEEEEECCTTCHH--HHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhc---CCeEEEEEecCCCHH--HHHH
Confidence            68999999999999 99999999999999999999 5544     34444444322   467889999999999  9999


Q ss_pred             HHHHHHH----HhCCCCEEEEcCCC----CCCCCCCCCCCHH----HHHHHHHccchHHHHHHHHHHHHHhccCCCC--e
Q 024517           76 AVDKACQ----ILGNLDAFVHCYTY----EGKMQDPLQVGED----EFKKLVKINFVAPWFLLKAVGRRMKESKAGG--S  141 (266)
Q Consensus        76 ~~~~~~~----~~g~id~li~~ag~----~~~~~~~~~~~~~----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g--~  141 (266)
                      +++++.+    .||+||+||||||.    ........+.+.+    .++..+++|+.+++.+++.+.+.|.+.+.++  .
T Consensus      2209 lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ 2288 (3089)
T 3zen_D         2209 LVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLH 2288 (3089)
T ss_dssp             HHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred             HHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeE
Confidence            9999998    89999999999997    2121222222333    3455599999999999999999998765222  2


Q ss_pred             -EEEEecccccccCCCCCchhhHHhHHHHHHHHHHHHHH--hCCCCcEEEEEecCccc-CCCcccccccHHHHHHHhhcc
Q 024517          142 -IVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME--IGKHKIRVNGIARGLHL-QDEYPIAVGQERAVKLVREAA  217 (266)
Q Consensus       142 -iv~iss~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e--~~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~  217 (266)
                       ++.+++..+.    +++...|++||+|+++|+|+++.|  +++ +|+||+|+||+|. |+++......    .......
T Consensus      2289 ii~~~ss~~g~----~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~~~~----~~~~~~~ 2359 (3089)
T 3zen_D         2289 VVLPGSPNRGM----FGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQNDAI----VSAVEEA 2359 (3089)
T ss_dssp             EEEEECSSTTS----CSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTTTTT----HHHHGGG
T ss_pred             EEEECCccccc----CCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccchhH----HHHHHhc
Confidence             2223332221    345568999999999999999999  664 6999999999999 7665432111    1122334


Q ss_pred             CCCCCCCChhhHHHHHHHHccCCCCc-ccccEEEEc--CCccccCCCcc
Q 024517          218 PLHRWLDVKNDLASTVIYLISDGSRY-MTGTTIYVD--GAQSITRPRMR  263 (266)
Q Consensus       218 ~~~~~~~~~~dva~~~~~l~s~~~~~-~~G~~i~~d--gG~~~~~~~~~  263 (266)
                      +.++ .+|+ |+|..++||+|+.+++ .+|+.+.+|  ||+....+.++
T Consensus      2360 ~~r~-~~Pe-EIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~ 2406 (3089)
T 3zen_D         2360 GVTT-YTTD-EMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMA 2406 (3089)
T ss_dssp             SCBC-EEHH-HHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHH
T ss_pred             CCCC-CCHH-HHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHH
Confidence            4444 3676 9999999999987654 555766666  99876555544

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.96  E-value=1.2e-28  Score=220.43  Aligned_cols=214  Identities=14%  Similarity=0.147  Sum_probs=167.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCC-eEEEEecc----cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNE----RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++++|||||++|||+++|++|+++|+ +|+++++.    +..+++.+++...   +.++.++.||++|.+  ++++++++
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~---g~~v~~~~~Dvtd~~--~v~~~~~~  313 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL---GVRVTIAACDAADRE--ALAALLAE  313 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT---TCEEEEEECCTTCHH--HHHHHHHT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc---CCeEEEEEccCCCHH--HHHHHHHH
Confidence            48999999999999999999999999 77777743    2345556666543   578999999999999  99999998


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+. ++||++|||||+.....++.+.+.++|+.++++|+.+++++.+.+.+.    . .++||++||..+..+  .++.
T Consensus       314 i~~~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~-~~~iV~~SS~a~~~g--~~g~  385 (496)
T 3mje_A          314 LPED-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL----D-LDAFVLFSSGAAVWG--SGGQ  385 (496)
T ss_dssp             CCTT-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----C-CSEEEEEEEHHHHTT--CTTC
T ss_pred             HHHh-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----C-CCEEEEEeChHhcCC--CCCc
Confidence            8766 789999999998536678889999999999999999999999877654    2 479999999999887  5899


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|++++.|++.++    ..||++++|+||++.++.+....   .....+.. ... ...+|+ +.++.+.++++.
T Consensus       386 ~~YaAaKa~ldala~~~~----~~Gi~v~sV~pG~w~~~gm~~~~---~~~~~l~~-~g~-~~l~pe-~~~~~l~~~l~~  455 (496)
T 3mje_A          386 PGYAAANAYLDALAEHRR----SLGLTASSVAWGTWGEVGMATDP---EVHDRLVR-QGV-LAMEPE-HALGALDQMLEN  455 (496)
T ss_dssp             HHHHHHHHHHHHHHHHHH----HTTCCCEEEEECEESSSCC---------CHHHHH-TTE-EEECHH-HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH----hcCCeEEEEECCcccCCccccCh---HHHHHHHh-cCC-CCCCHH-HHHHHHHHHHcC
Confidence            999999999999987554    46899999999999876554321   11111111 111 123455 999999998875


Q ss_pred             CC
Q 024517          240 GS  241 (266)
Q Consensus       240 ~~  241 (266)
                      ..
T Consensus       456 ~~  457 (496)
T 3mje_A          456 DD  457 (496)
T ss_dssp             TC
T ss_pred             CC
Confidence            43

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.96  E-value=3e-28  Score=229.72  Aligned_cols=219  Identities=16%  Similarity=0.205  Sum_probs=171.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHH-HcCC-eEEEEe-c---ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLA-KRGC-RLVLVG-N---ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAV   77 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~-~~g~-~v~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~   77 (266)
                      .+|++|||||++|||+++|++|+ ++|+ +|++++ +   .+..+++.+++.+.   +.++.++.||++|.+  ++++++
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~---G~~v~~~~~Dvsd~~--~v~~~~  603 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY---GAEVSLQACDVADRE--TLAKVL  603 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT---TCEEEEEECCTTCHH--HHHHHH
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc---CCcEEEEEeecCCHH--HHHHHH
Confidence            58999999999999999999999 7999 588888 4   34456666676554   578999999999999  999999


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCC
Q 024517           78 DKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP  157 (266)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  157 (266)
                      +++.+.+ +||++|||||+. ...++.+++.++|+..+++|+.|++++.+.+.|.|       .||++||.++..+  .+
T Consensus       604 ~~~~~~~-~id~lVnnAGv~-~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-------~iV~~SS~ag~~g--~~  672 (795)
T 3slk_A          604 ASIPDEH-PLTAVVHAAGVL-DDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-------ALVLFSSVSGVLG--SG  672 (795)
T ss_dssp             HTSCTTS-CEEEEEECCCCC-CCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-------EEEEEEETHHHHT--CS
T ss_pred             HHHHHhC-CCEEEEECCCcC-CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-------EEEEEccHHhcCC--CC
Confidence            9988776 899999999984 55788899999999999999999999999986655       7999999999887  68


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      ++..|+++|+    |++++++++.+.||++|+|+||++.|+++..... +.....+ ...+..+ .+++ |....+..++
T Consensus       673 g~~~YaAaka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~-~~~~~~~-~~~g~~~-l~~~-e~~~~~~~~l  744 (795)
T 3slk_A          673 GQGNYAAANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLR-EAEQDRL-ARSGLLP-ISTE-EGLSQFDAAC  744 (795)
T ss_dssp             SCHHHHHHHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHH-HHHHHHH-HHTTBCC-CCHH-HHHHHHHHHH
T ss_pred             CCHHHHHHHH----HHHHHHHHHHHcCCeEEEEECCeECcchhhcccc-HHHHHHH-HhcCCCC-CCHH-HHHHHHHHHH
Confidence            9999999996    5566666777789999999999999987644321 1111222 2233332 3444 6666666666


Q ss_pred             cCCCCcccc
Q 024517          238 SDGSRYMTG  246 (266)
Q Consensus       238 s~~~~~~~G  246 (266)
                      ......+..
T Consensus       745 ~~~~~~~~~  753 (795)
T 3slk_A          745 GGAHTVVAP  753 (795)
T ss_dssp             TSSCSSCCC
T ss_pred             hCCCcEEEE
Confidence            544444333

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.94  E-value=1.2e-26  Score=189.48  Aligned_cols=204  Identities=15%  Similarity=0.171  Sum_probs=151.5

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCe-EEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPV-EVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      +++++++|||||+|+||++++++|+++|++|++++ +.++.+++.    .     .++ .++.+|++  +  ++.+.   
T Consensus        18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~----~-----~~~~~~~~~Dl~--~--~~~~~---   81 (236)
T 3e8x_A           18 YFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR----E-----RGASDIVVANLE--E--DFSHA---   81 (236)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH----H-----TTCSEEEECCTT--S--CCGGG---
T ss_pred             CcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH----h-----CCCceEEEcccH--H--HHHHH---
Confidence            47899999999999999999999999999999999 544443322    1     267 88999999  3  33333   


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC-CC
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY-PG  158 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-~~  158 (266)
                          ++++|++|||||...         .++++..+++|+.++..+++++.+.    + .++||++||..+..+... +.
T Consensus        82 ----~~~~D~vi~~ag~~~---------~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~iv~~SS~~~~~~~~~~~~  143 (236)
T 3e8x_A           82 ----FASIDAVVFAAGSGP---------HTGADKTILIDLWGAIKTIQEAEKR----G-IKRFIMVSSVGTVDPDQGPMN  143 (236)
T ss_dssp             ----GTTCSEEEECCCCCT---------TSCHHHHHHTTTHHHHHHHHHHHHH----T-CCEEEEECCTTCSCGGGSCGG
T ss_pred             ----HcCCCEEEECCCCCC---------CCCccccchhhHHHHHHHHHHHHHc----C-CCEEEEEecCCCCCCCCChhh
Confidence                358999999998732         1457899999999999999988443    2 479999999766544111 35


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ...|+.+|++++.+++       ..|++++.|.||.+.++.........      ........+..++ |+|+.+.++++
T Consensus       144 ~~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~~------~~~~~~~~~i~~~-Dva~~~~~~~~  209 (236)
T 3e8x_A          144 MRHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTVS------PHFSEITRSITRH-DVAKVIAELVD  209 (236)
T ss_dssp             GHHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEEE------SSCSCCCCCEEHH-HHHHHHHHHTT
T ss_pred             hhhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEec------cCCCcccCcEeHH-HHHHHHHHHhc
Confidence            7899999999999876       36899999999999998654322110      0111123345555 99999999997


Q ss_pred             CCCCcccccEEEEcCCc
Q 024517          239 DGSRYMTGTTIYVDGAQ  255 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~  255 (266)
                      ..  ..+|+.+.+++|.
T Consensus       210 ~~--~~~g~~~~v~~~~  224 (236)
T 3e8x_A          210 QQ--HTIGKTFEVLNGD  224 (236)
T ss_dssp             CG--GGTTEEEEEEECS
T ss_pred             Cc--cccCCeEEEeCCC
Confidence            64  3789999998884

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.93  E-value=6.6e-26  Score=203.22  Aligned_cols=212  Identities=15%  Similarity=0.146  Sum_probs=162.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCe-EEEEeccc----ccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCR-LVLVGNER----RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~-v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      .++++|||||++|||++++++|+++|++ |+++++..    ..+++.+++...   +.++.++.||++|.+  ++.++++
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~---g~~v~~~~~Dv~d~~--~v~~~~~  299 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL---GARTTVAACDVTDRE--SVRELLG  299 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT---TCEEEEEECCTTCHH--HHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc---CCEEEEEEeCCCCHH--HHHHHHH
Confidence            5789999999999999999999999995 88888432    345555566543   468999999999998  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++ ..++++|+||||||.. ...++.+.+.++++.++++|+.+++++.+.+.+    .+ .++||++||..+..+  .++
T Consensus       300 ~i-~~~g~ld~VIh~AG~~-~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~-~~~~V~~SS~a~~~g--~~g  370 (486)
T 2fr1_A          300 GI-GDDVPLSAVFHAAATL-DDGTVDTLTGERIERASRAKVLGARNLHELTRE----LD-LTAFVLFSSFASAFG--APG  370 (486)
T ss_dssp             TS-CTTSCEEEEEECCCCC-CCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SC-CSEEEEEEEHHHHTC--CTT
T ss_pred             HH-HhcCCCcEEEECCccC-CCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CC-CCEEEEEcChHhcCC--CCC
Confidence            88 5568999999999984 456777889999999999999999999987743    22 589999999988777  578


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCC-CCCCChhhHHHHHHHHc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH-RWLDVKNDLASTVIYLI  237 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~  237 (266)
                      ...|+++|++++.|++.++    ..|+++++|+||++.++.+...   . ....+.   ..+ ...+++ |+++.+..++
T Consensus       371 ~~~Yaaaka~l~~la~~~~----~~gi~v~~i~pG~~~~~gm~~~---~-~~~~~~---~~g~~~i~~e-~~a~~l~~~l  438 (486)
T 2fr1_A          371 LGGYAPGNAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEG---P-VADRFR---RHGVIEMPPE-TACRALQNAL  438 (486)
T ss_dssp             CTTTHHHHHHHHHHHHHHH----HTTCCCEEEEECCBC----------------CT---TTTEECBCHH-HHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHH----hcCCeEEEEECCeeCCCcccch---h-HHHHHH---hcCCCCCCHH-HHHHHHHHHH
Confidence            8999999999999876554    4589999999999988632211   0 111110   111 234555 9999999998


Q ss_pred             cCCC
Q 024517          238 SDGS  241 (266)
Q Consensus       238 s~~~  241 (266)
                      +...
T Consensus       439 ~~~~  442 (486)
T 2fr1_A          439 DRAE  442 (486)
T ss_dssp             HTTC
T ss_pred             hCCC
Confidence            7543

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.93  E-value=2.7e-25  Score=200.08  Aligned_cols=208  Identities=20%  Similarity=0.210  Sum_probs=163.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEeccc----ccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNER----RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      .++++|||||++|||++++++|+++|+ +|+++++..    ..+++.+++...   +.++.++.||++|.+  +++++++
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~---g~~v~~~~~Dvtd~~--~v~~~~~  332 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH---GCEVVHAACDVAERD--ALAALVT  332 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT---TCEEEEEECCSSCHH--HHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc---CCEEEEEEeCCCCHH--HHHHHHh
Confidence            578999999999999999999999999 588888432    345556666543   468999999999988  8888887


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      +     +++|+||||||.. ....+.+.+.++++.++++|+.+++++.+.+.+. .  + .++||++||..+..+  .++
T Consensus       333 ~-----~~ld~VVh~AGv~-~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~--~-~~~~V~~SS~a~~~g--~~g  400 (511)
T 2z5l_A          333 A-----YPPNAVFHTAGIL-DDAVIDTLSPESFETVRGAKVCGAELLHQLTADI-K--G-LDAFVLFSSVTGTWG--NAG  400 (511)
T ss_dssp             H-----SCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC-T--T-CCCEEEEEEGGGTTC--CTT
T ss_pred             c-----CCCcEEEECCccc-CCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc-c--C-CCEEEEEeCHHhcCC--CCC
Confidence            6     7899999999984 4566778899999999999999999998876432 1  2 589999999988777  588


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcc-cCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH-LQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      ...|+++|++++.|++.++    ..|+++++|+||++ .|+|..... ....    .. .. ....+++ |+++.+..++
T Consensus       401 ~~~YaaaKa~ld~la~~~~----~~gi~v~sv~pG~~~~tgm~~~~~-~~~~----~~-~g-~~~l~~e-~~a~~l~~al  468 (511)
T 2z5l_A          401 QGAYAAANAALDALAERRR----AAGLPATSVAWGLWGGGGMAAGAG-EESL----SR-RG-LRAMDPD-AAVDALLGAM  468 (511)
T ss_dssp             BHHHHHHHHHHHHHHHHHH----TTTCCCEEEEECCBCSTTCCCCHH-HHHH----HH-HT-BCCBCHH-HHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHH----HcCCcEEEEECCcccCCccccccc-HHHH----Hh-cC-CCCCCHH-HHHHHHHHHH
Confidence            9999999999999998653    46899999999999 777764421 1111    11 11 1234555 9999999998


Q ss_pred             cCC
Q 024517          238 SDG  240 (266)
Q Consensus       238 s~~  240 (266)
                      ...
T Consensus       469 ~~~  471 (511)
T 2z5l_A          469 GRN  471 (511)
T ss_dssp             HHT
T ss_pred             hCC
Confidence            654

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.93  E-value=8.9e-25  Score=181.75  Aligned_cols=196  Identities=18%  Similarity=0.182  Sum_probs=149.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++|++|||||+++||++++++|+++|++|++++ +..+..            +.++.++.+|++|.+  ++.++++    
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~------------~~~~~~~~~Dl~d~~--~~~~~~~----   63 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA------------GPNEECVQCDLADAN--AVNAMVA----   63 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC------------CTTEEEEECCTTCHH--HHHHHHT----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc------------CCCCEEEEcCCCCHH--HHHHHHc----
Confidence            478999999999999999999999999999999 443322            258899999999988  8888775    


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc---------
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER---------  153 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~---------  153 (266)
                         ++|+||||||..         +.++|+.++++|+.+++++++++.+    .+ .++||++||..+...         
T Consensus        64 ---~~D~vi~~Ag~~---------~~~~~~~~~~~N~~g~~~l~~a~~~----~~-~~~iv~~SS~~~~g~~~~~~~~~e  126 (267)
T 3rft_A           64 ---GCDGIVHLGGIS---------VEKPFEQILQGNIIGLYNLYEAARA----HG-QPRIVFASSNHTIGYYPQTERLGP  126 (267)
T ss_dssp             ---TCSEEEECCSCC---------SCCCHHHHHHHHTHHHHHHHHHHHH----TT-CCEEEEEEEGGGGTTSBTTSCBCT
T ss_pred             ---CCCEEEECCCCc---------CcCCHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEcchHHhCCCCCCCCCCC
Confidence               699999999872         2245789999999999999999943    23 589999999877621         


Q ss_pred             -CCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHH
Q 024517          154 -GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAST  232 (266)
Q Consensus       154 -~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  232 (266)
                       .+.++...|+.+|.+.+.+++.++.++   |++++.|.||.+.++.....     ...         .+..++ |+++.
T Consensus       127 ~~~~~~~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~-----~~~---------~~~~~~-d~a~~  188 (267)
T 3rft_A          127 DVPARPDGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYR-----MLS---------TWFSHD-DFVSL  188 (267)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTT-----HHH---------HBCCHH-HHHHH
T ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCC-----cee---------eEEcHH-HHHHH
Confidence             113566889999999999999999885   68899999999987754221     111         123344 99999


Q ss_pred             HHHHccCCCCcccccEEEEcCC
Q 024517          233 VIYLISDGSRYMTGTTIYVDGA  254 (266)
Q Consensus       233 ~~~l~s~~~~~~~G~~i~~dgG  254 (266)
                      +..++...  ...+..+.+.++
T Consensus       189 ~~~~~~~~--~~~~~~~~~~s~  208 (267)
T 3rft_A          189 IEAVFRAP--VLGCPVVWGASA  208 (267)
T ss_dssp             HHHHHHCS--CCCSCEEEECCC
T ss_pred             HHHHHhCC--CCCceEEEEeCC
Confidence            98888653  233444444433

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.92  E-value=2.5e-25  Score=182.20  Aligned_cols=195  Identities=15%  Similarity=0.137  Sum_probs=144.9

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      +++|++|||||+++||++++++|+++|+  +|++++ +.++.++..         ..++.++.+|+++.+  +++++++ 
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~---------~~~~~~~~~D~~d~~--~~~~~~~-   83 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA---------YKNVNQEVVDFEKLD--DYASAFQ-   83 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG---------GGGCEEEECCGGGGG--GGGGGGS-
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc---------cCCceEEecCcCCHH--HHHHHhc-
Confidence            5689999999999999999999999999  999998 444433211         125788999999988  7776653 


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                            ++|++|||||...        ...+++..+++|+.++..+++++.+    .+ .++||++||..+..    +..
T Consensus        84 ------~~d~vi~~ag~~~--------~~~~~~~~~~~n~~~~~~~~~~~~~----~~-~~~iv~~SS~~~~~----~~~  140 (242)
T 2bka_A           84 ------GHDVGFCCLGTTR--------GKAGAEGFVRVDRDYVLKSAELAKA----GG-CKHFNLLSSKGADK----SSN  140 (242)
T ss_dssp             ------SCSEEEECCCCCH--------HHHHHHHHHHHHTHHHHHHHHHHHH----TT-CCEEEEECCTTCCT----TCS
T ss_pred             ------CCCEEEECCCccc--------ccCCcccceeeeHHHHHHHHHHHHH----CC-CCEEEEEccCcCCC----CCc
Confidence                  7999999998631        1245788999999999988887543    33 47999999986643    344


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCc-EEEEEecCcccCCCcccccccHHHHHHHhhccC----CCCCCCChhhHHHHHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKI-RVNGIARGLHLQDEYPIAVGQERAVKLVREAAP----LHRWLDVKNDLASTVI  234 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~~~  234 (266)
                      ..|+.+|++++.+++.+       ++ +++.|+||.+.|+...... .+..........|    ..++..++ |+|+.++
T Consensus       141 ~~Y~~sK~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~  211 (242)
T 2bka_A          141 FLYLQVKGEVEAKVEEL-------KFDRYSVFRPGVLLCDRQESRP-GEWLVRKFFGSLPDSWASGHSVPVV-TVVRAML  211 (242)
T ss_dssp             SHHHHHHHHHHHHHHTT-------CCSEEEEEECCEEECTTGGGSH-HHHHHHHHHCSCCTTGGGGTEEEHH-HHHHHHH
T ss_pred             chHHHHHHHHHHHHHhc-------CCCCeEEEcCceecCCCCCCcH-HHHHHHHhhcccCccccCCcccCHH-HHHHHHH
Confidence            68999999999998754       45 8999999999998753321 1122222222334    34556666 9999999


Q ss_pred             HHccCCC
Q 024517          235 YLISDGS  241 (266)
Q Consensus       235 ~l~s~~~  241 (266)
                      +++++..
T Consensus       212 ~~~~~~~  218 (242)
T 2bka_A          212 NNVVRPR  218 (242)
T ss_dssp             HHHTSCC
T ss_pred             HHHhCcc
Confidence            9998754

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.92  E-value=9.1e-24  Score=181.58  Aligned_cols=225  Identities=14%  Similarity=0.102  Sum_probs=164.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEecc--cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE--RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +++|||||+|+||++++++|+++|++|+++++.  ....+..+.+...    .++.++.+|+++.+  +++++++..   
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~----~~~~~~~~Dl~d~~--~~~~~~~~~---   72 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL----GNFEFVHGDIRNKN--DVTRLITKY---   72 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT----CCCEEEECCTTCHH--HHHHHHHHH---
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccC----CceEEEEcCCCCHH--HHHHHHhcc---
Confidence            579999999999999999999999999999842  2233333444321    46889999999988  888887652   


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc----------
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER----------  153 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~----------  153 (266)
                        ++|+|||+|+....     ..+.++++..+++|+.++..+++++.+.+.    .++||++||......          
T Consensus        73 --~~d~vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~----~~~iv~~SS~~v~g~~~~~~~~e~~  141 (347)
T 1orr_A           73 --MPDSCFHLAGQVAM-----TTSIDNPCMDFEINVGGTLNLLEAVRQYNS----NCNIIYSSTNKVYGDLEQYKYNETE  141 (347)
T ss_dssp             --CCSEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT----TCEEEEEEEGGGGTTCTTSCEEECS
T ss_pred             --CCCEEEECCcccCh-----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC----CceEEEeccHHHhCCCCcCCccccc
Confidence              69999999986321     123456888999999999999999988753    269999999764321          


Q ss_pred             ---------------CCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc---HHHHHHH-h
Q 024517          154 ---------------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ---ERAVKLV-R  214 (266)
Q Consensus       154 ---------------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~---~~~~~~~-~  214 (266)
                                     .+..+...|+.+|.+.+.+++.++.++   |++++.|.||.+.++........   ..+.... .
T Consensus       142 ~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~  218 (347)
T 1orr_A          142 TRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVE  218 (347)
T ss_dssp             SCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHH
T ss_pred             ccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHh
Confidence                           012356789999999999999999885   79999999999999875432111   1121111 1


Q ss_pred             hcc----CCCC---------CCCChhhHHHHHHHHccCCCCcccccEEEEcCCc
Q 024517          215 EAA----PLHR---------WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ  255 (266)
Q Consensus       215 ~~~----~~~~---------~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~  255 (266)
                      ...    |...         +..++ |+|++++++++. ....+|+.+.+++|.
T Consensus       219 ~~~~~~~~~~~~g~g~~~~~~i~v~-Dva~a~~~~~~~-~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          219 IKNGINKPFTISGNGKQVRDVLHAE-DMISLYFTALAN-VSKIRGNAFNIGGTI  270 (347)
T ss_dssp             HHTTCCCCEEEESSSCCEEECEEHH-HHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred             CcccCCCCeEEecCCcceEeeEEHH-HHHHHHHHHHhc-cccCCCCEEEeCCCC
Confidence            111    2222         23444 999999999863 245789999999985

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.92  E-value=8.7e-25  Score=186.17  Aligned_cols=224  Identities=17%  Similarity=0.160  Sum_probs=163.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +.+++|||||+|+||++++++|+++|++|+++++....+.    +        ++.++.+|++|.+  ++.++++.    
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~----l--------~~~~~~~Dl~d~~--~~~~~~~~----   72 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKL----P--------NVEMISLDIMDSQ--RVKKVISD----   72 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCCC----T--------TEEEEECCTTCHH--HHHHHHHH----
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccc----c--------eeeEEECCCCCHH--HHHHHHHh----
Confidence            5678999999999999999999999999999984332111    1        5778899999988  88888765    


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---------
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---------  154 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------  154 (266)
                       +++|+|||+|+....     ..+.++++..+++|+.++..+++++ +.+.  + .++||++||.......         
T Consensus        73 -~~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~-~~~iv~~SS~~v~g~~~~~~~~~~E  142 (321)
T 2pk3_A           73 -IKPDYIFHLAAKSSV-----KDSWLNKKGTFSTNVFGTLHVLDAV-RDSN--L-DCRILTIGSSEEYGMILPEESPVSE  142 (321)
T ss_dssp             -HCCSEEEECCSCCCH-----HHHTTCHHHHHHHHHHHHHHHHHHH-HHHT--C-CCEEEEEEEGGGTBSCCGGGCSBCT
T ss_pred             -cCCCEEEEcCcccch-----hhhhhcHHHHHHHHHHHHHHHHHHH-HHhC--C-CCeEEEEccHHhcCCCCCCCCCCCC
Confidence             379999999987321     1122357889999999999999999 5552  2 4799999998654321         


Q ss_pred             --CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhh---c--cC---------
Q 024517          155 --LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE---A--AP---------  218 (266)
Q Consensus       155 --~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~---~--~~---------  218 (266)
                        +.++...|+.+|.+.+.+++.++.++   |++++.+.||.+.+|..........+......   .  .+         
T Consensus       143 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  219 (321)
T 2pk3_A          143 ENQLRPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEA  219 (321)
T ss_dssp             TSCCBCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSC
T ss_pred             CCCCCCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCc
Confidence              12456799999999999999998874   79999999999999876431111122222111   1  01         


Q ss_pred             CCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCCc
Q 024517          219 LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       219 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      ...+..++ |+|++++++++..   .+|+.+.+++|..++..++
T Consensus       220 ~~~~v~v~-Dva~a~~~~~~~~---~~g~~~~i~~~~~~s~~e~  259 (321)
T 2pk3_A          220 VRDFTDVR-DIVQAYWLLSQYG---KTGDVYNVCSGIGTRIQDV  259 (321)
T ss_dssp             EEEEEEHH-HHHHHHHHHHHHC---CTTCEEEESCSCEEEHHHH
T ss_pred             EEeeEEHH-HHHHHHHHHHhCC---CCCCeEEeCCCCCeeHHHH
Confidence            11234455 9999999999754   5789999999876654443

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.92  E-value=2.4e-24  Score=184.93  Aligned_cols=237  Identities=16%  Similarity=0.146  Sum_probs=167.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .++++|||||+|+||++++++|+++|++|++++ +.+...+..+.+....  +.++.++.+|++|.+  ++.+++++   
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~--~~~~~~~~---   76 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT--GKTPAFHETDVSDER--ALARIFDA---   76 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH--SCCCEEECCCTTCHH--HHHHHHHH---
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc--CCCceEEEeecCCHH--HHHHHHhc---
Confidence            578999999999999999999999999999998 5666666665554432  247889999999988  88888875   


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC--------
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG--------  154 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~--------  154 (266)
                        +++|++||+|+....     ....++.+..+++|+.++..+++++    .+.+ .++||++||.......        
T Consensus        77 --~~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~iv~~SS~~~~g~~~~~~~~e~  144 (341)
T 3enk_A           77 --HPITAAIHFAALKAV-----GESVAKPIEYYRNNLDSLLSLLRVM----RERA-VKRIVFSSSATVYGVPERSPIDET  144 (341)
T ss_dssp             --SCCCEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHH----HHTT-CCEEEEEEEGGGBCSCSSSSBCTT
T ss_pred             --cCCcEEEECcccccc-----CccccChHHHHHHHHHHHHHHHHHH----HhCC-CCEEEEEecceEecCCCCCCCCCC
Confidence              579999999987321     1123445678889999999887765    3333 4799999997654211        


Q ss_pred             -CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----------cHHHHHHHhhc-cCCC--
Q 024517          155 -LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----------QERAVKLVREA-APLH--  220 (266)
Q Consensus       155 -~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----------~~~~~~~~~~~-~~~~--  220 (266)
                       +..+...|+.+|.+.+.+++.++.++.  +++++.+.|+.+.+|.......          ........... .+..  
T Consensus       145 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (341)
T 3enk_A          145 FPLSATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVF  222 (341)
T ss_dssp             SCCBCSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEE
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEe
Confidence             122346899999999999999998854  5999999999998874321110          01111111111 1111  


Q ss_pred             -------------CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCCc
Q 024517          221 -------------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       221 -------------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                                   .+... +|+|++++.++........|+.+++++|..++..++
T Consensus       223 g~~~~~~~g~~~~~~i~v-~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~  276 (341)
T 3enk_A          223 GSDYPTPDGTGVRDYIHV-VDLARGHIAALDALERRDASLTVNLGTGRGYSVLEV  276 (341)
T ss_dssp             CSCSSSTTSSCEECEEEH-HHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHH
T ss_pred             CCccCCCCCCeeEeeEEH-HHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHH
Confidence                         12223 499999999986432346799999999877665443

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.92  E-value=1.3e-23  Score=169.77  Aligned_cols=198  Identities=10%  Similarity=0.127  Sum_probs=142.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHH-HcCCeEEEEe-ccc-ccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLA-KRGCRLVLVG-NER-RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~-~~g~~v~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .|++|||||+++||++++++|+ ++|++|++++ +.+ +++++.    ..   ..++.++.+|++|.+  +++++++   
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~---~~~~~~~~~D~~d~~--~~~~~~~---   72 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID---HERVTVIEGSFQNPG--XLEQAVT---   72 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT---STTEEEEECCTTCHH--HHHHHHT---
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC---CCceEEEECCCCCHH--HHHHHHc---
Confidence            4789999999999999999999 8999999998 444 444332    11   358899999999988  8877774   


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch-
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA-  160 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~-  160 (266)
                          ++|++|||+|..                    |+.     ++.+++.|++.+ .++||++||..+...  .+... 
T Consensus        73 ----~~d~vv~~ag~~--------------------n~~-----~~~~~~~~~~~~-~~~iv~iSs~~~~~~--~~~~~~  120 (221)
T 3r6d_A           73 ----NAEVVFVGAMES--------------------GSD-----MASIVKALSRXN-IRRVIGVSMAGLSGE--FPVALE  120 (221)
T ss_dssp             ----TCSEEEESCCCC--------------------HHH-----HHHHHHHHHHTT-CCEEEEEEETTTTSC--SCHHHH
T ss_pred             ----CCCEEEEcCCCC--------------------Chh-----HHHHHHHHHhcC-CCeEEEEeeceecCC--CCcccc
Confidence                689999999852                    222     788888888765 579999999876554  23333 


Q ss_pred             ---------hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCC-CCCCChhhHH
Q 024517          161 ---------AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH-RWLDVKNDLA  230 (266)
Q Consensus       161 ---------~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva  230 (266)
                               .|+.+|.+++.+.+.       .|++++.|+||++.++........      .....+.. ++.+++ |+|
T Consensus       121 ~~~~~~~~~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~------~~~~~~~~~~~~~~~-dvA  186 (221)
T 3r6d_A          121 KWTFDNLPISYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYEL------IPEGAQFNDAQVSRE-AVV  186 (221)
T ss_dssp             HHHHHTSCHHHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEE------ECTTSCCCCCEEEHH-HHH
T ss_pred             cccccccccHHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceee------ccCCccCCCceeeHH-HHH
Confidence                     899999999987753       589999999999988732221110      00111222 244555 999


Q ss_pred             HHHHHHc--cCCCCcccccEEEEcCCccccCC
Q 024517          231 STVIYLI--SDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       231 ~~~~~l~--s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                      +.+++++  ++...++++.....+.+.....|
T Consensus       187 ~~~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~  218 (221)
T 3r6d_A          187 KAIFDILHAADETPFHRTSIGVGEPGTHYDXP  218 (221)
T ss_dssp             HHHHHHHTCSCCGGGTTEEEEEECTTCCCSSC
T ss_pred             HHHHHHHHhcChhhhhcceeeecCCCCCCCCC
Confidence            9999999  88777776665555554443333

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.91  E-value=2.4e-24  Score=183.74  Aligned_cols=235  Identities=13%  Similarity=0.034  Sum_probs=169.4

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHH-HcCCeEEEEe-ccccc------------HHHHHHHhcccCCCCCeEEEEEecCCC
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLA-KRGCRLVLVG-NERRL------------SSVAEKMMGSLKGGQPVEVVGLDMEED   68 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~-~~g~~v~~~~-~~~~~------------~~~~~~~~~~~~~~~~~~~~~~D~~~~   68 (266)
                      +.+|++|||||++|||++++..|+ +.|+.|++++ ..+..            ..+.+.+++.   |.+...+.||+++.
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~---G~~a~~i~~Dv~d~  124 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE---GLYSVTIDGDAFSD  124 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH---TCCEEEEESCTTSH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc---CCCceeEeCCCCCH
Confidence            457999999999999999999999 6799999887 43322            2344555544   67999999999999


Q ss_pred             chHHHHHHHHHHHHHhCCCCEEEEcCCCCCC------------CCCC---------------------CCCCHHHHHHHH
Q 024517           69 REGAFDEAVDKACQILGNLDAFVHCYTYEGK------------MQDP---------------------LQVGEDEFKKLV  115 (266)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~------------~~~~---------------------~~~~~~~~~~~~  115 (266)
                      +  +++++++++.+.+|+||+||||++....            .+|+                     ...+.++++.+.
T Consensus       125 e--~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~  202 (401)
T 4ggo_A          125 E--IKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATV  202 (401)
T ss_dssp             H--HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHH
T ss_pred             H--HHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHH
Confidence            9  9999999999999999999999986311            1111                     112455555555


Q ss_pred             H---ccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCC--CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEE
Q 024517          116 K---INFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP--GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI  190 (266)
Q Consensus       116 ~---~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~--~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v  190 (266)
                      .   ...++.+...+...+.|.+   +++++.+|+..+...  +|  +...++++|++|+..++.|+.++++  +++|++
T Consensus       203 ~vMg~s~~s~w~~al~~a~lla~---G~siva~SYiGse~t--~P~Y~~G~mG~AKaaLEa~~r~La~eL~~--~~a~v~  275 (401)
T 4ggo_A          203 KVMGGEDWERWIKQLSKEGLLEE---GCITLAYSYIGPEAT--QALYRKGTIGKAKEHLEATAHRLNKENPS--IRAFVS  275 (401)
T ss_dssp             HHHSSHHHHHHHHHHHHTTCEEE---EEEEEEEECCCCGGG--HHHHTTSHHHHHHHHHHHHHHHHHHHCTT--EEEEEE
T ss_pred             HHHhhhHHHHHHHHHHhhhcccC---CceEEEEeccCccee--ecCCCccHHHHHHHHHHHHHHHHHHhcCC--CcEEEE
Confidence            4   4555666666777676755   689999999877555  34  3347899999999999999999974  899999


Q ss_pred             ecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCcccccEEEEcC
Q 024517          191 ARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG  253 (266)
Q Consensus       191 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg  253 (266)
                      +||.+.|......+.-+-+...+.+  -++..++.+ .+.+.+..|..+. -|-++..+.+|.
T Consensus       276 v~~a~vT~AssaIP~~ply~~~l~k--vmk~~g~he-g~ieq~~rl~~~~-ly~~~~~~~~D~  334 (401)
T 4ggo_A          276 VNKGLVTRASAVIPVIPLYLASLFK--VMKEKGNHE-GCIEQITRLYAER-LYRKDGTIPVDE  334 (401)
T ss_dssp             ECCCCCCTTGGGSSSHHHHHHHHHH--HHHHHTCCC-CHHHHHHHHHHHT-TSCTTCCCCCCT
T ss_pred             EcCccccchhhcCCCchHHHHHHHH--HHHhcCCCC-chHHHHHHHHHHh-hccCCCCCCcCC
Confidence            9999999887765543332222111  122335566 9999999998642 233332344555

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.91  E-value=6.3e-24  Score=182.11  Aligned_cols=225  Identities=12%  Similarity=0.118  Sum_probs=161.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEE-EEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVV-GLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++++|||||+|+||++++++|+++|++|++++ +.++.+.+.+.+....+  .++.++ .+|+++.+  +++++++  
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~--~~~~~~~--   82 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYP--GRFETAVVEDMLKQG--AYDEVIK--   82 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHST--TTEEEEECSCTTSTT--TTTTTTT--
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCC--CceEEEEecCCcChH--HHHHHHc--
Confidence            5789999999999999999999999999999998 44444444444332211  467888 79999988  7766653  


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC-----
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL-----  155 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~-----  155 (266)
                           ++|+|||+|+.....        ++++..+++|+.++..+++++.+.   .+ .+++|++||........     
T Consensus        83 -----~~d~vih~A~~~~~~--------~~~~~~~~~n~~g~~~ll~~~~~~---~~-~~~iv~~SS~~~~~~~~~~~~~  145 (342)
T 1y1p_A           83 -----GAAGVAHIASVVSFS--------NKYDEVVTPAIGGTLNALRAAAAT---PS-VKRFVLTSSTVSALIPKPNVEG  145 (342)
T ss_dssp             -----TCSEEEECCCCCSCC--------SCHHHHHHHHHHHHHHHHHHHHTC---TT-CCEEEEECCGGGTCCCCTTCCC
T ss_pred             -----CCCEEEEeCCCCCCC--------CCHHHHHHHHHHHHHHHHHHHHhC---CC-CcEEEEeccHHHhcCCCCCCCC
Confidence                 699999999873221        246779999999999999988652   22 47999999986642210     


Q ss_pred             ------------------------CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc---cHH
Q 024517          156 ------------------------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---QER  208 (266)
Q Consensus       156 ------------------------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~---~~~  208 (266)
                                              ..+...|+.+|.+.+.+++.++.+++. +++++.|.||.+.++.......   ...
T Consensus       146 ~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~~~~~  224 (342)
T 1y1p_A          146 IYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTSG  224 (342)
T ss_dssp             CEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHHH
T ss_pred             cccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCccHHH
Confidence                                    012468999999999999999999876 8999999999999987643211   111


Q ss_pred             HHHHHhhcc--------CCCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCC
Q 024517          209 AVKLVREAA--------PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA  254 (266)
Q Consensus       209 ~~~~~~~~~--------~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG  254 (266)
                      +........        +...+..++ |+|++++.++..  ...+|+.+..+|+
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~v~v~-Dva~a~~~~~~~--~~~~g~~~~~~g~  275 (342)
T 1y1p_A          225 WMMSLFNGEVSPALALMPPQYYVSAV-DIGLLHLGCLVL--PQIERRRVYGTAG  275 (342)
T ss_dssp             HHHHHHTTCCCHHHHTCCSEEEEEHH-HHHHHHHHHHHC--TTCCSCEEEECCE
T ss_pred             HHHHHHcCCCccccccCCcCCEeEHH-HHHHHHHHHHcC--cccCCceEEEeCC
Confidence            222211111        222345555 999999999865  3467877766654

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.91  E-value=2e-24  Score=185.06  Aligned_cols=227  Identities=12%  Similarity=0.087  Sum_probs=162.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcC--CeEEEEeccc---ccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRG--CRLVLVGNER---RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g--~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      +++++|||||+|+||++++++|+++|  ++|+++++..   ..+.+ +.+.    ...++.++.+|++|.+  ++.+++ 
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~----~~~~~~~~~~Dl~d~~--~~~~~~-   73 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE----DDPRYTFVKGDVADYE--LVKELV-   73 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT----TCTTEEEEECCTTCHH--HHHHHH-
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc----cCCceEEEEcCCCCHH--HHHHHh-
Confidence            36789999999999999999999997  8999988432   22211 1111    1257889999999988  777776 


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC----
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG----  154 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~----  154 (266)
                            +++|+|||+||....     +.+.++++..+++|+.++..+++++.+.  . . .++||++||.......    
T Consensus        74 ------~~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~-~-~~~iv~~SS~~vyg~~~~~~  138 (336)
T 2hun_A           74 ------RKVDGVVHLAAESHV-----DRSISSPEIFLHSNVIGTYTLLESIRRE--N-P-EVRFVHVSTDEVYGDILKGS  138 (336)
T ss_dssp             ------HTCSEEEECCCCCCH-----HHHHHCTHHHHHHHHHHHHHHHHHHHHH--C-T-TSEEEEEEEGGGGCCCSSSC
T ss_pred             ------hCCCEEEECCCCcCh-----hhhhhCHHHHHHHHHHHHHHHHHHHHHh--C-C-CcEEEEeccHHHHCCCCCCC
Confidence                  379999999986321     1234567889999999999999999886  1 1 3799999997532210    


Q ss_pred             -----CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccC---------CC
Q 024517          155 -----LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAP---------LH  220 (266)
Q Consensus       155 -----~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~  220 (266)
                           +..+...|+.+|.+.+.+++.++.++   |++++.|.||.+.+|..........+........+         ..
T Consensus       139 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (336)
T 2hun_A          139 FTENDRLMPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVR  215 (336)
T ss_dssp             BCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CE
T ss_pred             cCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCcee
Confidence                 13456799999999999999999874   79999999999999875321101122222221111         11


Q ss_pred             CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCC
Q 024517          221 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       221 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                      .+..++ |+|++++++++..   .+|+.+.+++|..++..
T Consensus       216 ~~i~v~-Dva~~~~~~~~~~---~~g~~~~v~~~~~~s~~  251 (336)
T 2hun_A          216 DWLYVE-DHVRAIELVLLKG---ESREIYNISAGEEKTNL  251 (336)
T ss_dssp             EEEEHH-HHHHHHHHHHHHC---CTTCEEEECCSCEECHH
T ss_pred             eeEEHH-HHHHHHHHHHhCC---CCCCEEEeCCCCcccHH
Confidence            233445 9999999998653   47999999998766543

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.91  E-value=6.8e-24  Score=183.05  Aligned_cols=236  Identities=10%  Similarity=-0.018  Sum_probs=167.1

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHHHHHHHhcccCC--CCCeEEEEEecCCCchHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLKG--GQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++++++|||||+|+||++++++|+++|++|+++++ .....+..+.+.+....  ..++.++.+|+++.+  ++.++++ 
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~--~~~~~~~-  101 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLD--DCNNACA-  101 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHH--HHHHHHT-
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHH--HHHHHhc-
Confidence            56889999999999999999999999999999984 33222222222211110  147889999999987  7777664 


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC----
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL----  155 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~----  155 (266)
                            ++|+|||+|+.....     .+.++++..+++|+.++..+++++.+.    + .+++|++||........    
T Consensus       102 ------~~d~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~~v~~SS~~~~~~~~~~~~  165 (352)
T 1sb8_A          102 ------GVDYVLHQAALGSVP-----RSINDPITSNATNIDGFLNMLIAARDA----K-VQSFTYAASSSTYGDHPGLPK  165 (352)
T ss_dssp             ------TCSEEEECCSCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGGTTCCCSSB
T ss_pred             ------CCCEEEECCcccCch-----hhhhCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEeccHHhcCCCCCCCC
Confidence                  799999999863211     234568899999999999999998653    2 47999999987643311    


Q ss_pred             -----CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc--c--cHHHHHHHhhccCCC------
Q 024517          156 -----YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV--G--QERAVKLVREAAPLH------  220 (266)
Q Consensus       156 -----~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~--~--~~~~~~~~~~~~~~~------  220 (266)
                           ..+...|+.+|.+.+.+++.++.++   |++++.|.||.+.+|......  .  ...+........+..      
T Consensus       166 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~  242 (352)
T 1sb8_A          166 VEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGE  242 (352)
T ss_dssp             CTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSC
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCC
Confidence                 0245789999999999999998885   799999999999998754320  0  112222222222211      


Q ss_pred             ---CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCCc
Q 024517          221 ---RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       221 ---~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                         .+..++ |+|++++.++... ....|+.+.+++|..++..++
T Consensus       243 ~~~~~i~v~-Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s~~e~  285 (352)
T 1sb8_A          243 TSRDFCYIE-NTVQANLLAATAG-LDARNQVYNIAVGGRTSLNQL  285 (352)
T ss_dssp             CEECCEEHH-HHHHHHHHHHTCC-GGGCSEEEEESCSCCEEHHHH
T ss_pred             ceEeeEEHH-HHHHHHHHHHhcc-ccCCCceEEeCCCCCccHHHH
Confidence               233444 9999999888642 346789999998876654433

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.91  E-value=4e-24  Score=184.91  Aligned_cols=231  Identities=16%  Similarity=0.143  Sum_probs=165.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHc-CCeEEEEeccc---ccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKR-GCRLVLVGNER---RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~-g~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++|||||+|+||++++++|+++ |++|+++++..   ..+.+ ..+.    ...++.++.+|+++.+  ++.+++++   
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~----~~~~~~~~~~Dl~d~~--~~~~~~~~---   71 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS----ESNRYNFEHADICDSA--EITRIFEQ---   71 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT----TCTTEEEEECCTTCHH--HHHHHHHH---
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh----cCCCeEEEECCCCCHH--HHHHHHhh---
Confidence            4999999999999999999998 79999988432   22221 1111    1257899999999988  88888765   


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC----CCCeEEEEecccccccC----
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK----AGGSIVFLTSIIGAERG----  154 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~~g~iv~iss~~~~~~~----  154 (266)
                        +++|+|||+||....     +.+.++++..+++|+.++..+++++.+.|...+    .+++||++||.......    
T Consensus        72 --~~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~  144 (361)
T 1kew_A           72 --YQPDAVMHLAAESHV-----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPD  144 (361)
T ss_dssp             --HCCSEEEECCSCCCH-----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGG
T ss_pred             --cCCCEEEECCCCcCh-----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccc
Confidence              279999999987321     123456788999999999999999999875311    12599999997532110    


Q ss_pred             ---------------CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCC
Q 024517          155 ---------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPL  219 (266)
Q Consensus       155 ---------------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~  219 (266)
                                     +..+...|+.+|.+.+.+++.++.++   |++++.|.||.+.+|..........+........+.
T Consensus       145 ~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~  221 (361)
T 1kew_A          145 EVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPL  221 (361)
T ss_dssp             GSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCE
T ss_pred             cccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCc
Confidence                           12456789999999999999999886   699999999999998753211011222222221111


Q ss_pred             ---------CCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          220 ---------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       220 ---------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                               ..+..++ |+|++++++++..   .+|+.+.+++|..++..+
T Consensus       222 ~~~~~~~~~~~~i~v~-Dva~a~~~~~~~~---~~g~~~~v~~~~~~s~~e  268 (361)
T 1kew_A          222 PIYGKGDQIRDWLYVE-DHARALHMVVTEG---KAGETYNIGGHNEKKNLD  268 (361)
T ss_dssp             EEETTSCCEEEEEEHH-HHHHHHHHHHHHC---CTTCEEEECCCCEEEHHH
T ss_pred             eEcCCCceeEeeEEHH-HHHHHHHHHHhCC---CCCCEEEecCCCeeeHHH
Confidence                     1234455 9999999999753   489999999987665433

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.91  E-value=1.3e-23  Score=180.87  Aligned_cols=216  Identities=15%  Similarity=0.180  Sum_probs=161.5

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHc-CC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKR-GC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~-g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      +++|++|||||+|+||++++++|+++ |+ +|++++ +..+.++..+.+.     ..++.++.+|++|.+  ++.++++ 
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~-----~~~v~~~~~Dl~d~~--~l~~~~~-   90 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN-----DPRMRFFIGDVRDLE--RLNYALE-   90 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC-----CTTEEEEECCTTCHH--HHHHHTT-
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc-----CCCEEEEECCCCCHH--HHHHHHh-
Confidence            57899999999999999999999999 98 999998 4444444444442     247899999999987  7776663 


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                            ++|+|||+|+....  +   ....+....+++|+.++.++++++.+.-     .+++|++||..+..     +.
T Consensus        91 ------~~D~Vih~Aa~~~~--~---~~~~~~~~~~~~Nv~gt~~l~~aa~~~~-----v~~~V~~SS~~~~~-----p~  149 (344)
T 2gn4_A           91 ------GVDICIHAAALKHV--P---IAEYNPLECIKTNIMGASNVINACLKNA-----ISQVIALSTDKAAN-----PI  149 (344)
T ss_dssp             ------TCSEEEECCCCCCH--H---HHHHSHHHHHHHHHHHHHHHHHHHHHTT-----CSEEEEECCGGGSS-----CC
T ss_pred             ------cCCEEEECCCCCCC--C---chhcCHHHHHHHHHHHHHHHHHHHHhCC-----CCEEEEecCCccCC-----Cc
Confidence                  69999999987321  1   1223457899999999999999998742     47999999976533     34


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhcc---CC------CCCCCChhhHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAA---PL------HRWLDVKNDLA  230 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~---~~------~~~~~~~~dva  230 (266)
                      ..|+.+|++.+.+++.++.+++..|++++.|.||.+.++....   -+.+........   +.      ..+..++ |+|
T Consensus       150 ~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~---i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~-D~a  225 (344)
T 2gn4_A          150 NLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSV---VPFFKKLVQNKASEIPITDIRMTRFWITLD-EGV  225 (344)
T ss_dssp             SHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSH---HHHHHHHHHHTCCCEEESCTTCEEEEECHH-HHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCH---HHHHHHHHHcCCCceEEeCCCeEEeeEEHH-HHH
Confidence            6899999999999999998888889999999999999875321   112222221111   11      1134455 999


Q ss_pred             HHHHHHccCCCCcccccEEEEcCC
Q 024517          231 STVIYLISDGSRYMTGTTIYVDGA  254 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgG  254 (266)
                      +++++++...   ..|+.+.++++
T Consensus       226 ~~v~~~l~~~---~~g~~~~~~~~  246 (344)
T 2gn4_A          226 SFVLKSLKRM---HGGEIFVPKIP  246 (344)
T ss_dssp             HHHHHHHHHC---CSSCEEEECCC
T ss_pred             HHHHHHHhhc---cCCCEEecCCC
Confidence            9999998753   36888888766

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.90  E-value=1.3e-23  Score=179.75  Aligned_cols=219  Identities=14%  Similarity=0.163  Sum_probs=153.8

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++++++|||||+|+||++++++|+++|++|+++++ .....+..    ...   .++.++.+|++|.+  ++.++++++
T Consensus        17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~l---~~v~~~~~Dl~d~~--~~~~~~~~~   87 (330)
T 2pzm_A           17 RGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVL----PPV---AGLSVIEGSVTDAG--LLERAFDSF   87 (330)
T ss_dssp             TTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGS----CSC---TTEEEEECCTTCHH--HHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhh----hcc---CCceEEEeeCCCHH--HHHHHHhhc
Confidence            468999999999999999999999999999999984 33322111    111   36889999999988  888888764


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC---C
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY---P  157 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~---~  157 (266)
                           ++|+||||||.... .     +.++++  +++|+.++..+++++...    + .++||++||.........   +
T Consensus        88 -----~~D~vih~A~~~~~-~-----~~~~~~--~~~N~~~~~~l~~a~~~~----~-~~~iV~~SS~~~~~~~~~~~~~  149 (330)
T 2pzm_A           88 -----KPTHVVHSAAAYKD-P-----DDWAED--AATNVQGSINVAKAASKA----G-VKRLLNFQTALCYGRPATVPIP  149 (330)
T ss_dssp             -----CCSEEEECCCCCSC-T-----TCHHHH--HHHHTHHHHHHHHHHHHH----T-CSEEEEEEEGGGGCSCSSSSBC
T ss_pred             -----CCCEEEECCccCCC-c-----cccChh--HHHHHHHHHHHHHHHHHc----C-CCEEEEecCHHHhCCCccCCCC
Confidence                 79999999987322 1     345666  999999999999998742    2 479999999866433111   2


Q ss_pred             ------CchhhHHhHHHHHHHHHHHHHHhCCCCcE-EEEEecCcccCCCcccccccHHHHHHHhh-ccC-----CCCCCC
Q 024517          158 ------GAAAYGACAASIHQLVRTAAMEIGKHKIR-VNGIARGLHLQDEYPIAVGQERAVKLVRE-AAP-----LHRWLD  224 (266)
Q Consensus       158 ------~~~~y~~sK~a~~~~~~~la~e~~~~~i~-v~~v~pG~v~t~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~  224 (266)
                            +...|+.+|.+.+.+++.+  ++....+| .+.+.||. .+.+..      .+...... ...     ...+..
T Consensus       150 ~~E~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~  220 (330)
T 2pzm_A          150 IDSPTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPIP------TFYKRLKAGQKCFCSDTVRDFLD  220 (330)
T ss_dssp             TTCCCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHHH------HHHHHHHTTCCCCEESCEECEEE
T ss_pred             cCCCCCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHHH------HHHHHHHcCCEEeCCCCEeccee
Confidence                  5679999999999999877  33333456 56666664 232211      11111111 100     123455


Q ss_pred             ChhhHHH-HHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          225 VKNDLAS-TVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       225 ~~~dva~-~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      ++ |+|+ +++++++.. .   |+.+.+++|..++..+
T Consensus       221 ~~-Dva~~a~~~~~~~~-~---g~~~~v~~~~~~s~~e  253 (330)
T 2pzm_A          221 MS-DFLAIADLSLQEGR-P---TGVFNVSTGEGHSIKE  253 (330)
T ss_dssp             HH-HHHHHHHHHTSTTC-C---CEEEEESCSCCEEHHH
T ss_pred             HH-HHHHHHHHHHhhcC-C---CCEEEeCCCCCCCHHH
Confidence            55 9999 999999763 2   8999999987765443

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.90  E-value=8.9e-24  Score=181.41  Aligned_cols=230  Identities=10%  Similarity=0.031  Sum_probs=159.0

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      |++|++|||||+|+||++++++|+++|++|++++ +.+....  +.+... ....++.++.+|++|.+  ++.++++.+ 
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~-~~~~~~~~~~~Dl~d~~--~~~~~~~~~-   74 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKEL-GIENDVKIIHMDLLEFS--NIIRTIEKV-   74 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHT-TCTTTEEECCCCTTCHH--HHHHHHHHH-
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhc-cccCceeEEECCCCCHH--HHHHHHHhc-
Confidence            3589999999999999999999999999999998 4433221  112211 11247889999999988  888888765 


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc--------
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER--------  153 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~--------  153 (266)
                          ++|++||+||....     ..+.++++..+++|+.++..+++++.+. ..   .+++|++||......        
T Consensus        75 ----~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~---~~~iv~~SS~~vyg~~~~~~~~e  141 (345)
T 2z1m_A           75 ----QPDEVYNLAAQSFV-----GVSFEQPILTAEVDAIGVLRILEALRTV-KP---DTKFYQASTSEMFGKVQEIPQTE  141 (345)
T ss_dssp             ----CCSEEEECCCCCCH-----HHHTTSHHHHHHHHTHHHHHHHHHHHHH-CT---TCEEEEEEEGGGGCSCSSSSBCT
T ss_pred             ----CCCEEEECCCCcch-----hhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC---CceEEEEechhhcCCCCCCCCCc
Confidence                79999999986311     1223567899999999999999999852 11   379999999854211        


Q ss_pred             -CCCCCchhhHHhHHHHHHHHHHHHHHhC---CCCcEEEEEecCcccCCCcccccccHHHHHHH-hhc--------cCCC
Q 024517          154 -GLYPGAAAYGACAASIHQLVRTAAMEIG---KHKIRVNGIARGLHLQDEYPIAVGQERAVKLV-REA--------APLH  220 (266)
Q Consensus       154 -~~~~~~~~y~~sK~a~~~~~~~la~e~~---~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~-~~~--------~~~~  220 (266)
                       .+..+...|+.+|.+.+.+++.++.+++   ...++++.+.||.+.+++....   ....... ...        .+..
T Consensus       142 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  218 (345)
T 2z1m_A          142 KTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKI---TYSLARIKYGLQDKLVLGNLNAK  218 (345)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHH---HHHHHHHHTTSCSCEEESCTTCE
T ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHH---HHHHHHHHcCCCCeeeeCCCCce
Confidence             1134567899999999999999999876   3345678888998776542211   0111111 110        0111


Q ss_pred             C-CCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccC
Q 024517          221 R-WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       221 ~-~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      + +..++ |+|+++.++++...    ++.+++.+|..++.
T Consensus       219 ~~~~~v~-Dva~a~~~~~~~~~----~~~~~i~~~~~~s~  253 (345)
T 2z1m_A          219 RDWGYAP-EYVEAMWLMMQQPE----PDDYVIATGETHTV  253 (345)
T ss_dssp             ECCEEHH-HHHHHHHHHHTSSS----CCCEEECCSCCEEH
T ss_pred             eeeEEHH-HHHHHHHHHHhCCC----CceEEEeCCCCccH
Confidence            2 44455 99999999997542    35677777765543

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.90  E-value=3.4e-23  Score=179.42  Aligned_cols=231  Identities=13%  Similarity=0.084  Sum_probs=155.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHH--cCCeEEEEecccccHHHHHHHhcc-----cCCCCCeEEEEEecCCCchHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAK--RGCRLVLVGNERRLSSVAEKMMGS-----LKGGQPVEVVGLDMEEDREGAF   73 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~--~g~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~D~~~~~~~~v   73 (266)
                      |+++++++|||||+|+||++++++|++  +|++|+++++............+.     ...+.++.++.+|+++.+  ++
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~--~~   83 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPL--DL   83 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHH--HH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHH--HH
Confidence            467899999999999999999999999  899999998433211111110000     001346789999999988  77


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc
Q 024517           74 DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER  153 (266)
Q Consensus        74 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~  153 (266)
                      +++      ...++|+|||+||...       .+.++++..+++|+.++..+++++..    .  +++||++||......
T Consensus        84 ~~~------~~~~~D~vih~A~~~~-------~~~~~~~~~~~~Nv~gt~~ll~aa~~----~--~~~~V~~SS~~vyg~  144 (362)
T 3sxp_A           84 RRL------EKLHFDYLFHQAAVSD-------TTMLNQELVMKTNYQAFLNLLEIARS----K--KAKVIYASSAGVYGN  144 (362)
T ss_dssp             HHH------TTSCCSEEEECCCCCG-------GGCCCHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEEEEGGGGCS
T ss_pred             HHh------hccCCCEEEECCccCC-------ccccCHHHHHHHHHHHHHHHHHHHHH----c--CCcEEEeCcHHHhCC
Confidence            766      2368999999998631       13356789999999999999998833    2  356999999544322


Q ss_pred             C--------CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----cHHHHHHHhhccCCCC
Q 024517          154 G--------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKLVREAAPLHR  221 (266)
Q Consensus       154 ~--------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~  221 (266)
                      .        +..+...|+.+|.+.+.+++.++.+     +++..|.|+.+..|.......    ...+........+...
T Consensus       145 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (362)
T 3sxp_A          145 TKAPNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKL  219 (362)
T ss_dssp             CCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEEC
T ss_pred             CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEE
Confidence            1        0123456999999999999887665     677778887777765432210    1122222222222111


Q ss_pred             ---------CCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCCc
Q 024517          222 ---------WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       222 ---------~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                               +..++ |+|++++++++..   .+| .+++++|..++..++
T Consensus       220 ~~~g~~~~~~i~v~-Dva~ai~~~~~~~---~~g-~~~i~~~~~~s~~e~  264 (362)
T 3sxp_A          220 FEFGEQLRDFVYIE-DVIQANVKAMKAQ---KSG-VYNVGYSQARSYNEI  264 (362)
T ss_dssp             SGGGCCEEECEEHH-HHHHHHHHHTTCS---SCE-EEEESCSCEEEHHHH
T ss_pred             ECCCCeEEccEEHH-HHHHHHHHHHhcC---CCC-EEEeCCCCCccHHHH
Confidence                     22344 9999999999764   367 999998876654433

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.90  E-value=6.6e-23  Score=176.34  Aligned_cols=236  Identities=11%  Similarity=0.043  Sum_probs=159.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcC--CeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRG--CRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |+++++++|||||+|+||++++++|+++|  ++|+..++..... ....+.... ...++.++.+|++|.+  ++.++++
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~-~~~~l~~~~-~~~~~~~~~~Dl~d~~--~~~~~~~   95 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSG-NLNNVKSIQ-DHPNYYFVKGEIQNGE--LLEHVIK   95 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTC-CGGGGTTTT-TCTTEEEEECCTTCHH--HHHHHHH
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecccccc-chhhhhhhc-cCCCeEEEEcCCCCHH--HHHHHHh
Confidence            45678999999999999999999999999  6677666321110 111121111 1258999999999988  8888887


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC----
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG----  154 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~----  154 (266)
                      ..     ++|+|||+|+....     ....++++..+++|+.++..+++++.+.    + .+++|++||.......    
T Consensus        96 ~~-----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~v~~SS~~vy~~~~~~~  160 (346)
T 4egb_A           96 ER-----DVQVIVNFAAESHV-----DRSIENPIPFYDTNVIGTVTLLELVKKY----P-HIKLVQVSTDEVYGSLGKTG  160 (346)
T ss_dssp             HH-----TCCEEEECCCCC--------------CHHHHHHTHHHHHHHHHHHHS----T-TSEEEEEEEGGGGCCCCSSC
T ss_pred             hc-----CCCEEEECCcccch-----hhhhhCHHHHHHHHHHHHHHHHHHHHhc----C-CCEEEEeCchHHhCCCCcCC
Confidence            63     69999999987422     1244667889999999999999988553    2 4689999997543321    


Q ss_pred             ------CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCC----
Q 024517          155 ------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLD----  224 (266)
Q Consensus       155 ------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~----  224 (266)
                            +..+...|+.+|.+.+.+++.++.++   |++++.+.||.+.+|..........+........+...++.    
T Consensus       161 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (346)
T 4egb_A          161 RFTEETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNV  237 (346)
T ss_dssp             CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCE
T ss_pred             CcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeE
Confidence                  01235789999999999999998874   79999999999998765322111223333333333222211    


Q ss_pred             ----ChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          225 ----VKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       225 ----~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                          ..+|+|+++..++....   .|+.+.+.+|..++..+
T Consensus       238 ~~~i~v~Dva~a~~~~~~~~~---~g~~~~i~~~~~~s~~e  275 (346)
T 4egb_A          238 RDWLHVTDHCSAIDVVLHKGR---VGEVYNIGGNNEKTNVE  275 (346)
T ss_dssp             ECEEEHHHHHHHHHHHHHHCC---TTCEEEECCSCCEEHHH
T ss_pred             EeeEEHHHHHHHHHHHHhcCC---CCCEEEECCCCceeHHH
Confidence                13499999999997643   88999999987665443

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.89  E-value=3.6e-22  Score=172.51  Aligned_cols=231  Identities=13%  Similarity=0.083  Sum_probs=164.9

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++++++|||||+|+||++++++|+++|++|++++ +.++..+..+.+..    ..++.++.+|+++.+  ++.++++.. 
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~--~~~~~~~~~-   79 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV----ADGMQSEIGDIRDQN--KLLESIREF-   79 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT----TTTSEEEECCTTCHH--HHHHHHHHH-
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhcc----CCceEEEEccccCHH--HHHHHHHhc-
Confidence            4688999999999999999999999999999998 55444444443321    257889999999988  888888765 


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-------
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-------  154 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-------  154 (266)
                          ++|+|||+|+...     ...+.++++..+++|+.++..+++++.+. .  . .+++|++||.......       
T Consensus        80 ----~~d~vih~A~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~--~-~~~~v~~SS~~vyg~~~~~~~~~  146 (357)
T 1rkx_A           80 ----QPEIVFHMAAQPL-----VRLSYSEPVETYSTNVMGTVYLLEAIRHV-G--G-VKAVVNITSDKCYDNKEWIWGYR  146 (357)
T ss_dssp             ----CCSEEEECCSCCC-----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH-C--C-CCEEEEECCGGGBCCCCSSSCBC
T ss_pred             ----CCCEEEECCCCcc-----cccchhCHHHHHHHHHHHHHHHHHHHHHh-C--C-CCeEEEecCHHHhCCCCcCCCCC
Confidence                6999999998521     12335667899999999999999999763 1  1 4799999997532110       


Q ss_pred             ---CCCCchhhHHhHHHHHHHHHHHHHHhC------CCCcEEEEEecCcccCCCcccccc-cHHHHHHHhhccC--C---
Q 024517          155 ---LYPGAAAYGACAASIHQLVRTAAMEIG------KHKIRVNGIARGLHLQDEYPIAVG-QERAVKLVREAAP--L---  219 (266)
Q Consensus       155 ---~~~~~~~y~~sK~a~~~~~~~la~e~~------~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~--~---  219 (266)
                         +..+...|+.+|.+.+.+++.++.++.      ..|++++.|.||.+.+|....... -..+........+  .   
T Consensus       147 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~  226 (357)
T 1rkx_A          147 ENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNP  226 (357)
T ss_dssp             TTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCT
T ss_pred             CCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCC
Confidence               123567899999999999999999885      348999999999999986421100 1122222211111  1   


Q ss_pred             ---CCCCCChhhHHHHHHHHccCC--CCcccccEEEEcCC
Q 024517          220 ---HRWLDVKNDLASTVIYLISDG--SRYMTGTTIYVDGA  254 (266)
Q Consensus       220 ---~~~~~~~~dva~~~~~l~s~~--~~~~~G~~i~~dgG  254 (266)
                         ..+...+ |++++++.++...  .....|+.+++.+|
T Consensus       227 ~~~~~~v~v~-Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          227 HAIRPWQHVL-EPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             TCEECCEETH-HHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             CCeeccEeHH-HHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence               1234455 9999999887531  11245778888764

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.89  E-value=1e-22  Score=175.51  Aligned_cols=237  Identities=9%  Similarity=-0.038  Sum_probs=169.7

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCC--CCCeEEEEEecCCCchHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKG--GQPVEVVGLDMEEDREGAFDEAV   77 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~v~~~~   77 (266)
                      |.++++++|||||+|+||++++++|+++|++|++++ +.....+....+......  ..++.++.+|++|.+  ++.+++
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~--~~~~~~   98 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLT--TCEQVM   98 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHH--HHHHHT
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHH--HHHHHh
Confidence            346789999999999999999999999999999998 444455554444432110  047899999999987  777766


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC--
Q 024517           78 DKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL--  155 (266)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~--  155 (266)
                      +       ++|+|||+|+....     ....++.+..+++|+.++..+++++.+.    + -+++|++||........  
T Consensus        99 ~-------~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~v~~SS~~vyg~~~~~  161 (351)
T 3ruf_A           99 K-------GVDHVLHQAALGSV-----PRSIVDPITTNATNITGFLNILHAAKNA----Q-VQSFTYAASSSTYGDHPAL  161 (351)
T ss_dssp             T-------TCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGGTTCCCS
T ss_pred             c-------CCCEEEECCccCCc-----chhhhCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEecHHhcCCCCCC
Confidence            4       79999999986321     1234567889999999999999988543    2 36999999986543211  


Q ss_pred             -------CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----cHHHHHHHhhccCCCC---
Q 024517          156 -------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKLVREAAPLHR---  221 (266)
Q Consensus       156 -------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~---  221 (266)
                             ..+...|+.+|.+.+.+++.++.++   |++++.+.|+.+.+|.......    -..+........+...   
T Consensus       162 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  238 (351)
T 3ruf_A          162 PKVEENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGD  238 (351)
T ss_dssp             SBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESS
T ss_pred             CCccCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCC
Confidence                   1235789999999999999998885   7999999999999876543210    1222233322222221   


Q ss_pred             ------CCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          222 ------WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       222 ------~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                            +... +|+|++++.++... ....|+.+++.+|..++..+
T Consensus       239 g~~~~~~i~v-~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s~~e  282 (351)
T 3ruf_A          239 GETSRDFCYI-DNVIQMNILSALAK-DSAKDNIYNVAVGDRTTLNE  282 (351)
T ss_dssp             SCCEECCEEH-HHHHHHHHHHHTCC-GGGCSEEEEESCSCCEEHHH
T ss_pred             CCeEEeeEEH-HHHHHHHHHHHhhc-cccCCCEEEeCCCCcccHHH
Confidence                  2223 49999999988652 35688999998887665443

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.89  E-value=9e-23  Score=175.59  Aligned_cols=224  Identities=14%  Similarity=0.175  Sum_probs=160.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHc--CCeEEEEeccc-c-cHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKR--GCRLVLVGNER-R-LSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~--g~~v~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++|||||+|+||++++++|+++  |++|+++++.. . ..+..+.+    . ..++.++.+|++|.+  ++.++++   
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~----~-~~~~~~~~~Dl~d~~--~~~~~~~---   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI----L-GDRVELVVGDIADAE--LVDKLAA---   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG----C-SSSEEEEECCTTCHH--HHHHHHT---
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh----c-cCCeEEEECCCCCHH--HHHHHhh---
Confidence            68999999999999999999999  89999988432 1 11111111    1 247889999999987  7777664   


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-------
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-------  154 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-------  154 (266)
                          .+|+|||+|+....     ..+.++++..+++|+.++..+++++.+.      ++++|++||.......       
T Consensus        75 ----~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~------~~~~v~~SS~~vyg~~~~~~~~~  139 (348)
T 1oc2_A           75 ----KADAIVHYAAESHN-----DNSLNDPSPFIHTNFIGTYTLLEAARKY------DIRFHHVSTDEVYGDLPLREDLP  139 (348)
T ss_dssp             ----TCSEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGGCCBCCGGGST
T ss_pred             ----cCCEEEECCcccCc-----cchhhCHHHHHHHHHHHHHHHHHHHHHh------CCeEEEecccceeCCCccccccc
Confidence                46999999987321     1233567889999999999999999875      2499999997532110       


Q ss_pred             --------------CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCC-
Q 024517          155 --------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPL-  219 (266)
Q Consensus       155 --------------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-  219 (266)
                                    +..+...|+.+|.+.+.+++.++.++   |++++.|.||.+.+|..........+........+. 
T Consensus       140 ~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  216 (348)
T 1oc2_A          140 GHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPK  216 (348)
T ss_dssp             TTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCE
T ss_pred             ccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCce
Confidence                          12456789999999999999998885   799999999999998753211011222222221111 


Q ss_pred             --------CCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          220 --------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       220 --------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                              ..+..++ |+|++++++++..   .+|+.+.+++|..++..+
T Consensus       217 ~~~~~~~~~~~i~v~-Dva~~~~~~~~~~---~~g~~~~i~~~~~~s~~e  262 (348)
T 1oc2_A          217 LYGEGKNVRDWIHTN-DHSTGVWAILTKG---RMGETYLIGADGEKNNKE  262 (348)
T ss_dssp             EETTSCCEEECEEHH-HHHHHHHHHHHHC---CTTCEEEECCSCEEEHHH
T ss_pred             EecCCCceEeeEEHH-HHHHHHHHHhhCC---CCCCeEEeCCCCCCCHHH
Confidence                    1233444 9999999998653   479999999987655433

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.89  E-value=1.8e-22  Score=173.09  Aligned_cols=221  Identities=17%  Similarity=0.158  Sum_probs=148.3

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCC-CCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKG-GQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |.+++|++|||||+|+||++++++|+++|++|+++. +.+...+.. .+... .. ..++.++.+|++|.+  ++.++++
T Consensus         1 ~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~~~~Dl~d~~--~~~~~~~   76 (337)
T 2c29_D            1 MGSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVK-HLLDL-PKAETHLTLWKADLADEG--SFDEAIK   76 (337)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHH-HHHTS-TTHHHHEEEEECCTTSTT--TTHHHHT
T ss_pred             CCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHH-HHHhc-ccCCCeEEEEEcCCCCHH--HHHHHHc
Confidence            778899999999999999999999999999999877 444332222 22111 10 125788999999988  7777663


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC--
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY--  156 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~--  156 (266)
                             .+|+|||+|+..    .....  +..+..+++|+.++.++++++.+...    .++||++||..+..+...  
T Consensus        77 -------~~d~Vih~A~~~----~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~----~~riV~~SS~~~~~~~~~~~  139 (337)
T 2c29_D           77 -------GCTGVFHVATPM----DFESK--DPENEVIKPTIEGMLGIMKSCAAAKT----VRRLVFTSSAGTVNIQEHQL  139 (337)
T ss_dssp             -------TCSEEEECCCCC----CSSCS--SHHHHTHHHHHHHHHHHHHHHHHHSC----CCEEEEECCGGGTSCSSSCC
T ss_pred             -------CCCEEEEecccc----CCCCC--ChHHHHHHHHHHHHHHHHHHHHhCCC----ccEEEEeeeHhhcccCCCCC
Confidence                   589999999752    11111  22356899999999999999877531    369999999875432100  


Q ss_pred             ------------------CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHH---H--
Q 024517          157 ------------------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL---V--  213 (266)
Q Consensus       157 ------------------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~---~--  213 (266)
                                        +....|+.+|.+.+.+++.++.+   .|++++.|.|+.|.+|....... ......   .  
T Consensus       140 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~-~~~~~~~~~~~g  215 (337)
T 2c29_D          140 PVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFIMSSMP-PSLITALSPITG  215 (337)
T ss_dssp             SEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCSCSSCC-HHHHHHTHHHHT
T ss_pred             cccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCC-chHHHHHHHHcC
Confidence                              12346999999999999887765   37999999999999987543221 111110   0  


Q ss_pred             ----hhccCCCCCCCChhhHHHHHHHHccCCCCcccccEE
Q 024517          214 ----REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTI  249 (266)
Q Consensus       214 ----~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  249 (266)
                          ....+..++..++ |+|++++++++..  ..+|..+
T Consensus       216 ~~~~~~~~~~~~~i~v~-Dva~a~~~~~~~~--~~~~~~~  252 (337)
T 2c29_D          216 NEAHYSIIRQGQFVHLD-DLCNAHIYLFENP--KAEGRYI  252 (337)
T ss_dssp             CGGGHHHHTEEEEEEHH-HHHHHHHHHHHCT--TCCEEEE
T ss_pred             CCccccccCCCCEEEHH-HHHHHHHHHhcCc--ccCceEE
Confidence                0111223456666 9999999998653  3456543

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.89  E-value=3.1e-23  Score=170.36  Aligned_cols=222  Identities=13%  Similarity=0.029  Sum_probs=152.8

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHc--CCeEEEEecc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKR--GCRLVLVGNE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~--g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++++++|||||+++||++++++|+++  |++|++++|. ++.+    .+      ..++.++.+|+++.+  ++.++++ 
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~----~~------~~~~~~~~~D~~d~~--~~~~~~~-   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE----KI------GGEADVFIGDITDAD--SINPAFQ-   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHH----HT------TCCTTEEECCTTSHH--HHHHHHT-
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchh----hc------CCCeeEEEecCCCHH--HHHHHHc-
Confidence            56899999999999999999999999  8999999843 2221    22      146778999999988  8777764 


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCC--------CCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQD--------PLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGA  151 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~--------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~  151 (266)
                            ++|++|||||.......        ..+...++++..+++|+.++..+++++.+.    + .++||++||..+.
T Consensus        69 ------~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~iv~~SS~~~~  137 (253)
T 1xq6_A           69 ------GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----G-VKHIVVVGSMGGT  137 (253)
T ss_dssp             ------TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----T-CSEEEEEEETTTT
T ss_pred             ------CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----C-CCEEEEEcCccCC
Confidence                  58999999987422110        012223445568899999999988887543    2 4799999998765


Q ss_pred             ccCCCCCch-----hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCCh
Q 024517          152 ERGLYPGAA-----AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVK  226 (266)
Q Consensus       152 ~~~~~~~~~-----~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (266)
                      ...  ++..     .|+.+|.+++.+++.       .|++++.|.||.+.++.................  +..++..++
T Consensus       138 ~~~--~~~~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  206 (253)
T 1xq6_A          138 NPD--HPLNKLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQ--TDTKTVPRA  206 (253)
T ss_dssp             CTT--CGGGGGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSSCEEEESTTGGGG--SSCCEEEHH
T ss_pred             CCC--CccccccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchhhhhccCCcCCcC--CCCcEEcHH
Confidence            431  2222     366699999888752       689999999999998864221000000000100  122345555


Q ss_pred             hhHHHHHHHHccCCCCcccccEEEEcCCc---cccCCCc
Q 024517          227 NDLASTVIYLISDGSRYMTGTTIYVDGAQ---SITRPRM  262 (266)
Q Consensus       227 ~dva~~~~~l~s~~~~~~~G~~i~~dgG~---~~~~~~~  262 (266)
                       |+|+.++++++..  ..+|+.+.++++.   .++..++
T Consensus       207 -Dva~~~~~~~~~~--~~~g~~~~i~~~~~~~~~s~~e~  242 (253)
T 1xq6_A          207 -DVAEVCIQALLFE--EAKNKAFDLGSKPEGTSTPTKDF  242 (253)
T ss_dssp             -HHHHHHHHHTTCG--GGTTEEEEEEECCTTTSCCCCCH
T ss_pred             -HHHHHHHHHHcCc--cccCCEEEecCCCcCCCCCHHHH
Confidence             9999999999753  3579999998864   3555544

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.88  E-value=1.4e-22  Score=163.49  Aligned_cols=191  Identities=13%  Similarity=0.197  Sum_probs=146.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCC-CchHHHHHHHHHHHHHh
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEE-DREGAFDEAVDKACQIL   84 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~v~~~~~~~~~~~   84 (266)
                      ++|||||+|+||++++++|+++|++|++++ +.++.++.           .++.++.+|++| .+  ++.+++       
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----------~~~~~~~~D~~d~~~--~~~~~~-------   61 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-----------NNVKAVHFDVDWTPE--EMAKQL-------   61 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-----------TTEEEEECCTTSCHH--HHHTTT-------
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-----------CCceEEEecccCCHH--HHHHHH-------
Confidence            599999999999999999999999999999 43332211           478999999999 77  766665       


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC------
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG------  158 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~------  158 (266)
                      .++|++|||||...             ...+++|+.++..+++++..    .+ .+++|++||..+..+  .+.      
T Consensus        62 ~~~d~vi~~ag~~~-------------~~~~~~n~~~~~~l~~a~~~----~~-~~~iv~~SS~~~~~~--~~~~e~~~~  121 (219)
T 3dqp_A           62 HGMDAIINVSGSGG-------------KSLLKVDLYGAVKLMQAAEK----AE-VKRFILLSTIFSLQP--EKWIGAGFD  121 (219)
T ss_dssp             TTCSEEEECCCCTT-------------SSCCCCCCHHHHHHHHHHHH----TT-CCEEEEECCTTTTCG--GGCCSHHHH
T ss_pred             cCCCEEEECCcCCC-------------CCcEeEeHHHHHHHHHHHHH----hC-CCEEEEECcccccCC--Ccccccccc
Confidence            36999999998742             11678899999998888743    22 469999999877654  244      


Q ss_pred             -chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          159 -AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       159 -~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                       ...|+.+|.+.+.+++      ...|++++.|.||.+.++........         ..+...+..++ |+|+.+++++
T Consensus       122 ~~~~Y~~sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~~---------~~~~~~~i~~~-Dva~~i~~~l  185 (219)
T 3dqp_A          122 ALKDYYIAKHFADLYLT------KETNLDYTIIQPGALTEEEATGLIDI---------NDEVSASNTIG-DVADTIKELV  185 (219)
T ss_dssp             HTHHHHHHHHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEEE---------SSSCCCCEEHH-HHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHH------hccCCcEEEEeCceEecCCCCCcccc---------CCCcCCcccHH-HHHHHHHHHH
Confidence             6799999999999887      25689999999999998755432211         02223445555 9999999999


Q ss_pred             cCCCCcccccEEEEcCCc
Q 024517          238 SDGSRYMTGTTIYVDGAQ  255 (266)
Q Consensus       238 s~~~~~~~G~~i~~dgG~  255 (266)
                      +..  ...|+.+.+++|.
T Consensus       186 ~~~--~~~g~~~~i~~g~  201 (219)
T 3dqp_A          186 MTD--HSIGKVISMHNGK  201 (219)
T ss_dssp             TCG--GGTTEEEEEEECS
T ss_pred             hCc--cccCcEEEeCCCC
Confidence            764  3569999997774

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.88  E-value=1.4e-22  Score=165.44  Aligned_cols=191  Identities=16%  Similarity=0.178  Sum_probs=133.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcC-CeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRG-CRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g-~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ..|++|||||+++||++++++|+++| ++|++++ +.++.++.       .  ..++.++.+|++|.+  +++++++   
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~-------~--~~~~~~~~~Dl~d~~--~~~~~~~---   87 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-------Y--PTNSQIIMGDVLNHA--ALKQAMQ---   87 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS-------C--CTTEEEEECCTTCHH--HHHHHHT---
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc-------c--cCCcEEEEecCCCHH--HHHHHhc---
Confidence            46889999999999999999999999 8999988 44433221       1  247899999999988  8877774   


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC---
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG---  158 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~---  158 (266)
                          .+|++|||+|..         .              ....++.+++.|++.+ .++||++||.......  +.   
T Consensus        88 ----~~D~vv~~a~~~---------~--------------~~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~--~~~~~  137 (236)
T 3qvo_A           88 ----GQDIVYANLTGE---------D--------------LDIQANSVIAAMKACD-VKRLIFVLSLGIYDEV--PGKFV  137 (236)
T ss_dssp             ----TCSEEEEECCST---------T--------------HHHHHHHHHHHHHHTT-CCEEEEECCCCC-----------
T ss_pred             ----CCCEEEEcCCCC---------c--------------hhHHHHHHHHHHHHcC-CCEEEEEecceecCCC--Ccccc
Confidence                689999999751         0              1134567888887766 5899999998765432  22   


Q ss_pred             ----------chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccC-CCCCCCChh
Q 024517          159 ----------AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAP-LHRWLDVKN  227 (266)
Q Consensus       159 ----------~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  227 (266)
                                ...|..+|           ..+.+.||+++.|.||++.++......       ......+ .+++.+++ 
T Consensus       138 ~~~~~~~~~~~~~~~~~~-----------~~l~~~gi~~~~vrPg~i~~~~~~~~~-------~~~~~~~~~~~~i~~~-  198 (236)
T 3qvo_A          138 EWNNAVIGEPLKPFRRAA-----------DAIEASGLEYTILRPAWLTDEDIIDYE-------LTSRNEPFKGTIVSRK-  198 (236)
T ss_dssp             -------CGGGHHHHHHH-----------HHHHTSCSEEEEEEECEEECCSCCCCE-------EECTTSCCSCSEEEHH-
T ss_pred             cchhhcccchHHHHHHHH-----------HHHHHCCCCEEEEeCCcccCCCCcceE-------EeccCCCCCCcEECHH-
Confidence                      12233222           223357999999999999887543211       0111122 24556666 


Q ss_pred             hHHHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          228 DLASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       228 dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      |+|+.+++++++...++ |+.+.++++.+..
T Consensus       199 DvA~~i~~ll~~~~~~~-g~~~~i~~~~~~~  228 (236)
T 3qvo_A          199 SVAALITDIIDKPEKHI-GENIGINQPGTDG  228 (236)
T ss_dssp             HHHHHHHHHHHSTTTTT-TEEEEEECSSCCC
T ss_pred             HHHHHHHHHHcCccccc-CeeEEecCCCCCC
Confidence            99999999999876565 8888888876654

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.88  E-value=9.9e-23  Score=210.26  Aligned_cols=177  Identities=15%  Similarity=0.131  Sum_probs=136.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCe-EEEEe-cccccH---HHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCR-LVLVG-NERRLS---SVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~-v~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      .+|++|||||++|||+++|++|+++|++ |++++ +..+.+   +..+++...   +.++.++.||+++.+  +++++++
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~---g~~v~~~~~Dvsd~~--~v~~~~~ 1957 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ---GVQVLVSTSNASSLD--GARSLIT 1957 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT---TCEEEEECCCSSSHH--HHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC---CCEEEEEecCCCCHH--HHHHHHH
Confidence            5899999999999999999999999997 67777 444443   333444332   468899999999999  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++. .+++||++|||||+. ...++.+.+.++|+..+++|+.|++++.+.+.+.|.+   .+.||++||.++..+  .++
T Consensus      1958 ~~~-~~g~id~lVnnAgv~-~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~---~g~iV~iSS~ag~~g--~~g 2030 (2512)
T 2vz8_A         1958 EAT-QLGPVGGVFNLAMVL-RDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE---LDYFVIFSSVSCGRG--NAG 2030 (2512)
T ss_dssp             HHH-HHSCEEEEEECCCC-----------------CTTTTHHHHHHHHHHHHHHCTT---CCEEEEECCHHHHTT--CTT
T ss_pred             HHH-hcCCCcEEEECCCcC-CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc---CCEEEEecchhhcCC--CCC
Confidence            987 479999999999984 4567888999999999999999999999999998865   379999999999877  588


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCccc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL  196 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~  196 (266)
                      ...|+++|+++.+|++..+.+    |++..++.+|.+.
T Consensus      2031 ~~~Y~aaKaal~~l~~~rr~~----Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2031 QANYGFANSAMERICEKRRHD----GLPGLAVQWGAIG 2064 (2512)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHT----TSCCCEEEECCBC
T ss_pred             cHHHHHHHHHHHHHHHHHHHC----CCcEEEEEccCcC
Confidence            999999999999999987664    6777888877754

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.88  E-value=1e-22  Score=180.27  Aligned_cols=225  Identities=10%  Similarity=-0.001  Sum_probs=155.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccc----cHHHHHHHhcccC------CCCCeEEEEEecCCCchHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERR----LSSVAEKMMGSLK------GGQPVEVVGLDMEEDREGAF   73 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~~~~v   73 (266)
                      .++++|||||+|+||++++++|+++|++|++++|.+.    .+.+.+.+...+.      ...++.++.+|+++.+  ++
T Consensus        68 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~--~l  145 (427)
T 4f6c_A           68 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD--DV  145 (427)
T ss_dssp             CCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---C--CC
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcc--cC
Confidence            5679999999999999999999999999999984433    2222222221100      0258999999999977  65


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc
Q 024517           74 DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER  153 (266)
Q Consensus        74 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~  153 (266)
                      .        .++++|+|||||+...        ..++++..+++|+.++..+++++.+   .   ..++|++||... ..
T Consensus       146 ~--------~~~~~d~Vih~A~~~~--------~~~~~~~~~~~Nv~g~~~l~~aa~~---~---~~~~v~~SS~~~-G~  202 (427)
T 4f6c_A          146 V--------LPENMDTIIHAGARTD--------HFGDDDEFEKVNVQGTVDVIRLAQQ---H---HARLIYVSTISV-GT  202 (427)
T ss_dssp             C--------CSSCCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHH---T---TCEEEEEEEGGG-GS
T ss_pred             C--------CcCCCCEEEECCcccC--------CCCCHHHHHHHHHHHHHHHHHHHHh---c---CCcEEEECchHh-CC
Confidence            5        4578999999998742        2256788999999999999999977   1   479999999876 10


Q ss_pred             C-----------------CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc-------HHH
Q 024517          154 G-----------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ-------ERA  209 (266)
Q Consensus       154 ~-----------------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~-------~~~  209 (266)
                      .                 .......|+.+|.+.+.+++.++.    .|++++.|.||.|.++........       ..+
T Consensus       203 ~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~  278 (427)
T 4f6c_A          203 YFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMV  278 (427)
T ss_dssp             EECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHH
T ss_pred             CccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcchHHHHHH
Confidence            0                 012678999999999999998754    589999999999998865432110       112


Q ss_pred             HHHHhhc--cCC-----C-CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          210 VKLVREA--APL-----H-RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       210 ~~~~~~~--~~~-----~-~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      .......  .|.     . .+... +|+|+++++++....   .|+++.+++|..++-.+
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~v~v-~DvA~ai~~~~~~~~---~g~~~~l~~~~~~s~~e  334 (427)
T 4f6c_A          279 MNDLLQLDCIGVSMAEMPVDFSFV-DTTARQIVALAQVNT---PQIIYHVLSPNKMPVKS  334 (427)
T ss_dssp             HHHHHHSSEEEHHHHTCEECCEEH-HHHHHHHHHHTTSCC---CCSEEEESCSCCEEHHH
T ss_pred             HHHHHhcCCCCCccccceEEEeeH-HHHHHHHHHHHcCCC---CCCEEEecCCCCCcHHH
Confidence            2222111  111     1 13333 599999999997643   89999999987665443

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.88  E-value=2.2e-22  Score=172.42  Aligned_cols=225  Identities=13%  Similarity=0.097  Sum_probs=158.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHc---C---CeEEEEecccc--cHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKR---G---CRLVLVGNERR--LSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~---g---~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      ++|||||+|+||++++++|+++   |   ++|+++++...  ..+..+.+.    ...++.++.+|+++.+  ++++++ 
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~--~~~~~~-   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD----ADPRLRFVHGDIRDAG--LLAREL-   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT----TCTTEEEEECCTTCHH--HHHHHT-
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc----cCCCeEEEEcCCCCHH--HHHHHh-
Confidence            5999999999999999999997   8   89999884321  111111111    1257889999999987  777665 


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC----
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG----  154 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~----  154 (266)
                            .++|+|||+|+....     ..+.++++..+++|+.++..+++++.+..     .++||++||.......    
T Consensus        75 ------~~~d~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~-----~~~~v~~SS~~vyg~~~~~~  138 (337)
T 1r6d_A           75 ------RGVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAVDAG-----VGRVVHVSTNQVYGSIDSGS  138 (337)
T ss_dssp             ------TTCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHTT-----CCEEEEEEEGGGGCCCSSSC
T ss_pred             ------cCCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHcC-----CCEEEEecchHHhCCCCCCC
Confidence                  579999999986321     12335667899999999999999997752     3699999997543211    


Q ss_pred             -----CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCC---------
Q 024517          155 -----LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH---------  220 (266)
Q Consensus       155 -----~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------  220 (266)
                           +..+...|+.+|.+.+.+++.++.++   |++++.+.||.+.+|..........+........+..         
T Consensus       139 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (337)
T 1r6d_A          139 WTESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVR  215 (337)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEE
T ss_pred             CCCCCCCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeE
Confidence                 13456789999999999999998875   6999999999999887532100112222222211111         


Q ss_pred             CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          221 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       221 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      .+..++ |+|+++..++...   .+|+.+.+++|..++..+
T Consensus       216 ~~i~v~-Dva~a~~~~~~~~---~~g~~~~v~~~~~~s~~e  252 (337)
T 1r6d_A          216 EWVHTD-DHCRGIALVLAGG---RAGEIYHIGGGLELTNRE  252 (337)
T ss_dssp             EEEEHH-HHHHHHHHHHHHC---CTTCEEEECCCCEEEHHH
T ss_pred             eeEeHH-HHHHHHHHHHhCC---CCCCEEEeCCCCCccHHH
Confidence            123344 9999999998653   378999999987665433

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.88  E-value=3.8e-21  Score=153.11  Aligned_cols=197  Identities=13%  Similarity=0.098  Sum_probs=141.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +++++||||+++||++++++|+++|++|++++ +.++.+..        . ..++.++.+|+++.+  ++.++++     
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~--------~-~~~~~~~~~D~~~~~--~~~~~~~-----   66 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------G-PRPAHVVVGDVLQAA--DVDKTVA-----   66 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------S-CCCSEEEESCTTSHH--HHHHHHT-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc--------c-CCceEEEEecCCCHH--HHHHHHc-----
Confidence            58999999999999999999999999999998 44332210        0 247889999999987  7777664     


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCC----Cc
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP----GA  159 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~----~~  159 (266)
                        .+|++||++|.....    +.        .++|+.++..+++++.+.    + .+++|++||......  .+    ..
T Consensus        67 --~~d~vi~~a~~~~~~----~~--------~~~n~~~~~~~~~~~~~~----~-~~~~v~~Ss~~~~~~--~~~~~~~~  125 (206)
T 1hdo_A           67 --GQDAVIVLLGTRNDL----SP--------TTVMSEGARNIVAAMKAH----G-VDKVVACTSAFLLWD--PTKVPPRL  125 (206)
T ss_dssp             --TCSEEEECCCCTTCC----SC--------CCHHHHHHHHHHHHHHHH----T-CCEEEEECCGGGTSC--TTCSCGGG
T ss_pred             --CCCEEEECccCCCCC----Cc--------cchHHHHHHHHHHHHHHh----C-CCeEEEEeeeeeccC--cccccccc
Confidence              589999999873221    11        136677777777766542    2 469999999865433  22    56


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcc-cCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH-LQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ..|+.+|.+++.+++.       .+++++.|.||.+ .++........      . ...|..++..++ |+|+.+.++++
T Consensus       126 ~~y~~~K~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~------~-~~~~~~~~i~~~-Dva~~~~~~~~  190 (206)
T 1hdo_A          126 QAVTDDHIRMHKVLRE-------SGLKYVAVMPPHIGDQPLTGAYTVT------L-DGRGPSRVISKH-DLGHFMLRCLT  190 (206)
T ss_dssp             HHHHHHHHHHHHHHHH-------TCSEEEEECCSEEECCCCCSCCEEE------S-SSCSSCSEEEHH-HHHHHHHHTTS
T ss_pred             hhHHHHHHHHHHHHHh-------CCCCEEEEeCCcccCCCCCcceEec------c-cCCCCCCccCHH-HHHHHHHHHhc
Confidence            7899999999988742       5799999999998 34332211100      0 112213455666 99999999997


Q ss_pred             CCCCcccccEEEEcCCc
Q 024517          239 DGSRYMTGTTIYVDGAQ  255 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~  255 (266)
                      ..  ..+|+.+.++||.
T Consensus       191 ~~--~~~g~~~~i~~g~  205 (206)
T 1hdo_A          191 TD--EYDGHSTYPSHQY  205 (206)
T ss_dssp             CS--TTTTCEEEEECCC
T ss_pred             Cc--cccccceeeeccc
Confidence            64  3789999999985

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.88  E-value=4.4e-22  Score=170.81  Aligned_cols=215  Identities=13%  Similarity=0.156  Sum_probs=150.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      .++|||||+|+||++++++|+++|++|++++ +..+.++    +..     .++.++.+|++|.+  ++.++++      
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~~-----~~~~~~~~Dl~d~~--~~~~~~~------   76 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LAY-----LEPECRVAEMLDHA--GLERALR------   76 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GGG-----GCCEEEECCTTCHH--HHHHHTT------
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hcc-----CCeEEEEecCCCHH--HHHHHHc------
Confidence            3799999999999999999999999999998 4443322    111     26788999999987  7776663      


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC--------
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY--------  156 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~--------  156 (266)
                       ++|+|||+|+...       ...++++..+++|+.++..+++++.+.    + .+++|++||.........        
T Consensus        77 -~~d~vih~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~E~~  143 (342)
T 2x4g_A           77 -GLDGVIFSAGYYP-------SRPRRWQEEVASALGQTNPFYAACLQA----R-VPRILYVGSAYAMPRHPQGLPGHEGL  143 (342)
T ss_dssp             -TCSEEEEC-------------------CHHHHHHHHHHHHHHHHHHH----T-CSCEEEECCGGGSCCCTTSSCBCTTC
T ss_pred             -CCCEEEECCccCc-------CCCCCHHHHHHHHHHHHHHHHHHHHHc----C-CCeEEEECCHHhhCcCCCCCCCCCCC
Confidence             6999999998632       234567889999999999999999774    2 379999999876433110        


Q ss_pred             --CC----chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCc-ccccccHHHHHHHhhccCC----CC--CC
Q 024517          157 --PG----AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY-PIAVGQERAVKLVREAAPL----HR--WL  223 (266)
Q Consensus       157 --~~----~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~-~~~~~~~~~~~~~~~~~~~----~~--~~  223 (266)
                        .+    ...|+.+|.+.+.+++.++.   . |++++.|.||.+.++.. ...  ...+........+.    .+  +.
T Consensus       144 ~~~p~~~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i  217 (342)
T 2x4g_A          144 FYDSLPSGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPT--TGRVITAIGNGEMTHYVAGQRNVI  217 (342)
T ss_dssp             CCSSCCTTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCS--TTHHHHHHHTTCCCEEECCEEEEE
T ss_pred             CCCccccccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCcccc--HHHHHHHHHcCCCccccCCCccee
Confidence              01    67899999999999999876   3 79999999999999865 211  11222222221111    11  34


Q ss_pred             CChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          224 DVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       224 ~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      .++ |+|+++.++++...   .|+.+.+++|. ++..+
T Consensus       218 ~v~-Dva~~~~~~~~~~~---~g~~~~v~~~~-~s~~e  250 (342)
T 2x4g_A          218 DAA-EAGRGLLMALERGR---IGERYLLTGHN-LEMAD  250 (342)
T ss_dssp             EHH-HHHHHHHHHHHHSC---TTCEEEECCEE-EEHHH
T ss_pred             eHH-HHHHHHHHHHhCCC---CCceEEEcCCc-ccHHH
Confidence            455 99999999997543   28999999987 65443

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.87  E-value=4.5e-22  Score=170.47  Aligned_cols=219  Identities=13%  Similarity=0.107  Sum_probs=150.5

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++++++|||||+|+||++++++|+++|++|+++++. ....+   .+..    -.++.++.+|++|.+  ++.++++.  
T Consensus        19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~l~~----~~~~~~~~~Dl~d~~--~~~~~~~~--   87 (333)
T 2q1w_A           19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRRE---HLKD----HPNLTFVEGSIADHA--LVNQLIGD--   87 (333)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GSCC----CTTEEEEECCTTCHH--HHHHHHHH--
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchh---hHhh----cCCceEEEEeCCCHH--HHHHHHhc--
Confidence            568899999999999999999999999999999843 22211   1111    136889999999988  88888765  


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccc----cCCC-
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAE----RGLY-  156 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~----~~~~-  156 (266)
                         +++|+|||+||.... .     +.++++  +++|+.++..+++++.+.    + .++||++||.....    .... 
T Consensus        88 ---~~~D~vih~A~~~~~-~-----~~~~~~--~~~N~~~~~~l~~a~~~~----~-~~~iV~~SS~~~~g~~~~~~~~~  151 (333)
T 2q1w_A           88 ---LQPDAVVHTAASYKD-P-----DDWYND--TLTNCVGGSNVVQAAKKN----N-VGRFVYFQTALCYGVKPIQQPVR  151 (333)
T ss_dssp             ---HCCSEEEECCCCCSC-T-----TCHHHH--HHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGGCSCCCSSSBC
T ss_pred             ---cCCcEEEECceecCC-C-----ccCChH--HHHHHHHHHHHHHHHHHh----C-CCEEEEECcHHHhCCCcccCCCC
Confidence               379999999987322 1     334555  999999999999999762    2 47999999976543    1100 


Q ss_pred             -----CCc-hhhHHhHHHHHHHHHH-HHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhh-c-----cCCCCCC
Q 024517          157 -----PGA-AAYGACAASIHQLVRT-AAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE-A-----APLHRWL  223 (266)
Q Consensus       157 -----~~~-~~y~~sK~a~~~~~~~-la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~-~-----~~~~~~~  223 (266)
                           .+. ..|+.+|.+.+.+++. ++        ++..|.|+.+..|...... ...+...... .     .+...+.
T Consensus       152 ~~E~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i  222 (333)
T 2q1w_A          152 LDHPRNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVSGP-LPIFFQRLSEGKKCFVTKARRDFV  222 (333)
T ss_dssp             TTSCCCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCSSH-HHHHHHHHHTTCCCEEEECEECEE
T ss_pred             cCCCCCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcCcH-HHHHHHHHHcCCeeeCCCceEeeE
Confidence                 123 7899999999999987 54        5667777777666521100 1111111111 1     1122344


Q ss_pred             CChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCCc
Q 024517          224 DVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       224 ~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      .++ |+|+++.++++...    |+.+.+++|..++..++
T Consensus       223 ~v~-Dva~ai~~~~~~~~----g~~~~v~~~~~~s~~e~  256 (333)
T 2q1w_A          223 FVK-DLARATVRAVDGVG----HGAYHFSSGTDVAIKEL  256 (333)
T ss_dssp             EHH-HHHHHHHHHHTTCC----CEEEECSCSCCEEHHHH
T ss_pred             EHH-HHHHHHHHHHhcCC----CCEEEeCCCCCccHHHH
Confidence            455 99999999997643    89999999877654433

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.87  E-value=3.5e-22  Score=169.39  Aligned_cols=220  Identities=15%  Similarity=0.114  Sum_probs=156.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      ++|||||+|+||++++++|+++|++|+++++ .....+   .+    .  .++.++.+|+++.+  ++.+++++     .
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~----~--~~~~~~~~Dl~~~~--~~~~~~~~-----~   65 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV----P--KGVPFFRVDLRDKE--GVERAFRE-----F   65 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS----C--TTCCEECCCTTCHH--HHHHHHHH-----H
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc----c--cCeEEEECCCCCHH--HHHHHHHh-----c
Confidence            6999999999999999999999999999884 322111   11    1  35678889999988  88887764     2


Q ss_pred             CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-----------
Q 024517           86 NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-----------  154 (266)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-----------  154 (266)
                      ++|++||+|+....     ..+.++++..+++|+.+++.+++++.+    .+ .+++|++||..+.++.           
T Consensus        66 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~-~~~iv~~SS~~~~~g~~~~~~~~~E~~  135 (311)
T 2p5y_A           66 RPTHVSHQAAQASV-----KVSVEDPVLDFEVNLLGGLNLLEACRQ----YG-VEKLVFASTGGAIYGEVPEGERAEETW  135 (311)
T ss_dssp             CCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CSEEEEEEEHHHHHCCCCTTCCBCTTS
T ss_pred             CCCEEEECccccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHH----hC-CCEEEEeCCChhhcCCCCCCCCcCCCC
Confidence            69999999986321     123466788999999999999998853    22 3699999997322211           


Q ss_pred             CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc---cHHHHHHHhhccCC------------
Q 024517          155 LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---QERAVKLVREAAPL------------  219 (266)
Q Consensus       155 ~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~~~------------  219 (266)
                      +..+...|+.+|++.+.+++.++.++   |++++.|.||.+.+|.......   ...+........+.            
T Consensus       136 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  212 (311)
T 2p5y_A          136 PPRPKSPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEG  212 (311)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCC
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCC
Confidence            01245689999999999999998875   7999999999999986533211   11122222221111            


Q ss_pred             --CCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          220 --HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       220 --~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                        ..+..++ |+|+++.++++..     |+.+++++|..++..+
T Consensus       213 ~~~~~i~v~-Dva~a~~~~~~~~-----~~~~~i~~~~~~s~~e  250 (311)
T 2p5y_A          213 CVRDYVYVG-DVAEAHALALFSL-----EGIYNVGTGEGHTTRE  250 (311)
T ss_dssp             CEECEEEHH-HHHHHHHHHHHHC-----CEEEEESCSCCEEHHH
T ss_pred             eEEeeEEHH-HHHHHHHHHHhCC-----CCEEEeCCCCCccHHH
Confidence              1223344 9999999998652     8899999887665443

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.87  E-value=4.2e-22  Score=169.05  Aligned_cols=220  Identities=11%  Similarity=0.152  Sum_probs=153.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      |++|||||+|+||++++++|+++|..|++..+.....+.   +      ...+.++.+|+++ +  ++.++++       
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~---~------~~~~~~~~~Dl~~-~--~~~~~~~-------   62 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF---V------NEAARLVKADLAA-D--DIKDYLK-------   62 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG---S------CTTEEEECCCTTT-S--CCHHHHT-------
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh---c------CCCcEEEECcCCh-H--HHHHHhc-------
Confidence            479999999999999999999999444444343322111   0      2478899999999 7  6666663       


Q ss_pred             CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc---------CCC
Q 024517           86 NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER---------GLY  156 (266)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~---------~~~  156 (266)
                      ++|++||+|+...     ...+.++++..+++|+.++..+++++..    .+ .+++|++||......         .+.
T Consensus        63 ~~d~vih~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~iv~~SS~~vyg~~~~~~~~E~~~~  132 (313)
T 3ehe_A           63 GAEEVWHIAANPD-----VRIGAENPDEIYRNNVLATYRLLEAMRK----AG-VSRIVFTSTSTVYGEAKVIPTPEDYPT  132 (313)
T ss_dssp             TCSEEEECCCCCC-----CC-CCCCHHHHHHHHHHHHHHHHHHHHH----HT-CCEEEEECCGGGGCSCSSSSBCTTSCC
T ss_pred             CCCEEEECCCCCC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEeCchHHhCcCCCCCCCCCCCC
Confidence            7999999998521     1234456789999999999999988644    23 479999999765421         113


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhc-cCCC---------CCCCCh
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA-APLH---------RWLDVK  226 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-~~~~---------~~~~~~  226 (266)
                      .+...|+.+|.+.+.+++.++.++   |++++.+.|+.+.+|...... -..+....... .+..         .+... 
T Consensus       133 ~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v-  207 (313)
T 3ehe_A          133 HPISLYGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHGV-IYDFIMKLKRNPEELEILGNGEQNKSYIYI-  207 (313)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCSH-HHHHHHHHHHCTTEEEESTTSCCEECCEEH-
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcCh-HHHHHHHHHcCCCceEEeCCCCeEEeEEEH-
Confidence            456789999999999999999884   799999999999988654311 11122221111 1111         12333 


Q ss_pred             hhHHHHHHHHccCCCCcccccEEEEcCCccccCCCc
Q 024517          227 NDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       227 ~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      +|+|+++++++..   ...|+.+++.+|..++..++
T Consensus       208 ~Dva~a~~~~~~~---~~~~~~~ni~~~~~~s~~e~  240 (313)
T 3ehe_A          208 SDCVDAMLFGLRG---DERVNIFNIGSEDQIKVKRI  240 (313)
T ss_dssp             HHHHHHHHHHTTC---CSSEEEEECCCSCCEEHHHH
T ss_pred             HHHHHHHHHHhcc---CCCCceEEECCCCCeeHHHH
Confidence            4999999999973   35688999988876654443

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.87  E-value=4.2e-22  Score=173.62  Aligned_cols=226  Identities=9%  Similarity=0.024  Sum_probs=159.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |+.+.+++|||||+|+||++++++|+++|++|+++++ .......    .     ..++.++.+|+++.+  ++.++++ 
T Consensus        25 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~-----~~~v~~~~~Dl~d~~--~~~~~~~-   92 (379)
T 2c5a_A           25 WPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE----D-----MFCDEFHLVDLRVME--NCLKVTE-   92 (379)
T ss_dssp             CTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG----G-----GTCSEEEECCTTSHH--HHHHHHT-
T ss_pred             ccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh----c-----cCCceEEECCCCCHH--HHHHHhC-
Confidence            3445789999999999999999999999999999984 3322110    0     136788999999988  7777663 


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-----
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-----  154 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-----  154 (266)
                            ++|+|||+|+.... .   ....++++..+++|+.++..+++++.+.    + .+++|++||.......     
T Consensus        93 ------~~d~Vih~A~~~~~-~---~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-~~~~V~~SS~~v~~~~~~~~~  157 (379)
T 2c5a_A           93 ------GVDHVFNLAADMGG-M---GFIQSNHSVIMYNNTMISFNMIEAARIN----G-IKRFFYASSACIYPEFKQLET  157 (379)
T ss_dssp             ------TCSEEEECCCCCCC-H---HHHTTCHHHHHHHHHHHHHHHHHHHHHT----T-CSEEEEEEEGGGSCGGGSSSS
T ss_pred             ------CCCEEEECceecCc-c---cccccCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEeehheeCCCCCCCc
Confidence                  69999999986321 0   0112457889999999999999988542    2 3699999997543210     


Q ss_pred             -----------CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----cHHHHHHHhhccC-
Q 024517          155 -----------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKLVREAAP-  218 (266)
Q Consensus       155 -----------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~-  218 (266)
                                 +..+...|+.+|.+.+.+++.++.++   |++++.|.||.+.+|.......    ...+........+ 
T Consensus       158 ~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (379)
T 2c5a_A          158 TNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDR  234 (379)
T ss_dssp             SSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSC
T ss_pred             cCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCc
Confidence                       12345689999999999999998874   7999999999999986532110    1122222222111 


Q ss_pred             C---------CCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          219 L---------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       219 ~---------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      .         ..+..+ +|+|++++.++...    .|+.+.+.+|..++..+
T Consensus       235 ~~~~g~g~~~~~~i~v-~Dva~ai~~~l~~~----~~~~~ni~~~~~~s~~e  281 (379)
T 2c5a_A          235 FEMWGDGLQTRSFTFI-DECVEGVLRLTKSD----FREPVNIGSDEMVSMNE  281 (379)
T ss_dssp             EEEESCSCCEECCEEH-HHHHHHHHHHHHSS----CCSCEEECCCCCEEHHH
T ss_pred             eEEeCCCCeeEEEEEH-HHHHHHHHHHhhcc----CCCeEEeCCCCccCHHH
Confidence            1         112334 49999999999753    57789998887665443

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.87  E-value=4.6e-21  Score=168.12  Aligned_cols=229  Identities=15%  Similarity=0.112  Sum_probs=156.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccH-----------------HHHHHHhcccCCCCCeEEEEEecC
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLS-----------------SVAEKMMGSLKGGQPVEVVGLDME   66 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~D~~   66 (266)
                      .+.++|||||+|.||++++++|+++|++|+++++..+..                 +....+....  ..++.++.+|++
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~v~~~~~Dl~   87 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT--GKSIELYVGDIC   87 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH--CCCCEEEESCTT
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhcc--CCceEEEECCCC
Confidence            567899999999999999999999999999998422111                 1111111111  247889999999


Q ss_pred             CCchHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEe
Q 024517           67 EDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLT  146 (266)
Q Consensus        67 ~~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~is  146 (266)
                      +.+  ++.++++..     ++|+|||+||....  .....+.+++...+++|+.++..+++++.+.-.    ..++|++|
T Consensus        88 d~~--~~~~~~~~~-----~~D~Vih~A~~~~~--~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~----~~~~V~~S  154 (404)
T 1i24_A           88 DFE--FLAESFKSF-----EPDSVVHFGEQRSA--PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE----ECHLVKLG  154 (404)
T ss_dssp             SHH--HHHHHHHHH-----CCSEEEECCSCCCH--HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT----TCEEEEEC
T ss_pred             CHH--HHHHHHhcc-----CCCEEEECCCCCCc--cchhhCccchhhhHHHHHHHHHHHHHHHHHhCC----CcEEEEeC
Confidence            988  888887764     69999999986321  111235566788999999999999999866411    24999999


Q ss_pred             cccccccC----------------------CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccc-
Q 024517          147 SIIGAERG----------------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA-  203 (266)
Q Consensus       147 s~~~~~~~----------------------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~-  203 (266)
                      |.......                      +..+...|+.+|.+.+.+++.++.++   |++++.|.||.|.+|..... 
T Consensus       155 S~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~~~~~  231 (404)
T 1i24_A          155 TMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKTDETE  231 (404)
T ss_dssp             CGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCCTTGG
T ss_pred             cHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCCCccc
Confidence            97543210                      12345689999999999999998876   79999999999999864210 


Q ss_pred             ----------------cccHHHHHHHhhccCCC---------CCCCChhhHHHHHHHHccCCCCcccc--cEEEEcC
Q 024517          204 ----------------VGQERAVKLVREAAPLH---------RWLDVKNDLASTVIYLISDGSRYMTG--TTIYVDG  253 (266)
Q Consensus       204 ----------------~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~s~~~~~~~G--~~i~~dg  253 (266)
                                      ..-..+........+..         .+... +|+|++++.++....  ..|  +.+++.+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v-~Dva~a~~~~l~~~~--~~g~~~~yni~~  305 (404)
T 1i24_A          232 MHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDI-RDTVQCVEIAIANPA--KAGEFRVFNQFT  305 (404)
T ss_dssp             GSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEH-HHHHHHHHHHHHSCC--CTTCEEEEEECS
T ss_pred             cccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEH-HHHHHHHHHHHhCcc--cCCCceEEEECC
Confidence                            00112222222211211         12233 499999999986532  246  6888855

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.87  E-value=5.6e-22  Score=172.73  Aligned_cols=225  Identities=11%  Similarity=0.053  Sum_probs=157.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcC-CeEEEEecc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRG-CRLVLVGNE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g-~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++++|||||+|+||++++++|+++| ++|+++++. ....+   .+.    ...++.++.+|+++.+  +++++++  
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~----~~~~v~~~~~Dl~d~~--~l~~~~~--   98 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP----DHPAVRFSETSITDDA--LLASLQD--   98 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC----CCTTEEEECSCTTCHH--HHHHCCS--
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc----CCCceEEEECCCCCHH--HHHHHhh--
Confidence            578899999999999999999999999 999999843 32211   111    1257889999999987  7666553  


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhcc-CCCCeEEEEecccccc-------
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES-KAGGSIVFLTSIIGAE-------  152 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~g~iv~iss~~~~~-------  152 (266)
                           ++|+|||+|+....     ..+.++++..+++|+.++..+++++.    +. + .+++|++||.....       
T Consensus        99 -----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~-~~~~V~~SS~~vyg~~~~~~~  163 (377)
T 2q1s_A           99 -----EYDYVFHLATYHGN-----QSSIHDPLADHENNTLTTLKLYERLK----HFKR-LKKVVYSAAGCSIAEKTFDDA  163 (377)
T ss_dssp             -----CCSEEEECCCCSCH-----HHHHHCHHHHHHHHTHHHHHHHHHHT----TCSS-CCEEEEEEEC-----------
T ss_pred             -----CCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHH----HhCC-CCeEEEeCCHHHcCCCCCCCc
Confidence                 79999999986321     12335678899999999999998873    22 2 46999999975321       


Q ss_pred             ----cC---CC-CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCc---------cc----ccccHHHHH
Q 024517          153 ----RG---LY-PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY---------PI----AVGQERAVK  211 (266)
Q Consensus       153 ----~~---~~-~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~---------~~----~~~~~~~~~  211 (266)
                          ..   +. .+...|+.+|.+.+.+++.++.++   |++++.|.||.+.++..         ..    ......+..
T Consensus       164 ~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~  240 (377)
T 2q1s_A          164 KATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIY  240 (377)
T ss_dssp             ---CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHH
T ss_pred             CcccccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHH
Confidence                10   11 345789999999999999998875   79999999999998865         21    000122223


Q ss_pred             HHhhccCCCC---------CCCChhhHHHH-HHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          212 LVREAAPLHR---------WLDVKNDLAST-VIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       212 ~~~~~~~~~~---------~~~~~~dva~~-~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      ......+...         +..+ +|+|++ ++.++....   +| .+.+++|..++..+
T Consensus       241 ~~~~g~~~~~~g~g~~~~~~i~v-~Dva~a~i~~~~~~~~---~g-~~~i~~~~~~s~~e  295 (377)
T 2q1s_A          241 KALKGMPLPLENGGVATRDFIFV-EDVANGLIACAADGTP---GG-VYNIASGKETSIAD  295 (377)
T ss_dssp             HHHTTCCCCCSGGGCCEECCEEH-HHHHHHHHHHHHHCCT---TE-EEECCCCCCEEHHH
T ss_pred             HHHcCCCeEEeCCCCeEEeeEEH-HHHHHHHHHHHHhcCC---CC-eEEecCCCceeHHH
Confidence            2322222221         1223 499999 999987642   78 99998887655443

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.87  E-value=2.1e-22  Score=170.77  Aligned_cols=221  Identities=15%  Similarity=0.140  Sum_probs=156.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      +++|||||+|+||++++++|+++|++|++++ +.+...+..         ...+.++.+|+++.+   +.+++       
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~~Dl~d~~---~~~~~-------   61 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV---------NPSAELHVRDLKDYS---WGAGI-------   61 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS---------CTTSEEECCCTTSTT---TTTTC-------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc---------CCCceEEECccccHH---HHhhc-------
Confidence            4799999999999999999999999999998 443332211         247889999999865   22222       


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---------C
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---------L  155 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~  155 (266)
                      .. |++||+|+...     ...+.++++..+++|+.++..+++++...    + .+++|++||.......         +
T Consensus        62 ~~-d~vih~A~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~iv~~SS~~vyg~~~~~~~~e~~~  130 (312)
T 3ko8_A           62 KG-DVVFHFAANPE-----VRLSTTEPIVHFNENVVATFNVLEWARQT----G-VRTVVFASSSTVYGDADVIPTPEEEP  130 (312)
T ss_dssp             CC-SEEEECCSSCS-----SSGGGSCHHHHHHHHHHHHHHHHHHHHHH----T-CCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred             CC-CEEEECCCCCC-----chhhhhCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEeCcHHHhCCCCCCCCCCCCC
Confidence            23 99999998521     12445567889999999999999988543    2 4699999997654221         1


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhc-cCCC---------CCCCC
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA-APLH---------RWLDV  225 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-~~~~---------~~~~~  225 (266)
                      ..+...|+.+|.+.+.+++.++.++   |++++.|.||.+.+|....... ..+....... .+..         .+..+
T Consensus       131 ~~p~~~Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~i~v  206 (312)
T 3ko8_A          131 YKPISVYGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGVI-YDFIMKLRRNPNVLEVLGDGTQRKSYLYV  206 (312)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSHH-HHHHHHHHHCTTEEEEC----CEECEEEH
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCChH-HHHHHHHHhCCCCeEEcCCCCeEEeeEEH
Confidence            2356789999999999999999986   7999999999999987543211 1222222111 1111         12234


Q ss_pred             hhhHHHHHHHHccC-CCCcccccEEEEcCCccccCCC
Q 024517          226 KNDLASTVIYLISD-GSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       226 ~~dva~~~~~l~s~-~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      + |+|++++.++.. ......|+.+++.+|..++..+
T Consensus       207 ~-Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  242 (312)
T 3ko8_A          207 R-DAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLD  242 (312)
T ss_dssp             H-HHHHHHHHHHHHHHHSCCSEEEEEESCSSCEEHHH
T ss_pred             H-HHHHHHHHHHHhccccCCCCcEEEEcCCCceeHHH
Confidence            4 999999999865 1234678999998887665443

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.87  E-value=2.8e-21  Score=168.38  Aligned_cols=233  Identities=11%  Similarity=0.013  Sum_probs=153.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccc-----cHHHHHHHhcccCCCC-CeEEEEEecCCCchHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERR-----LSSVAEKMMGSLKGGQ-PVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |++|||||+|+||++++++|+++|++|++++ +.+.     ++.....+...   +. ++.++.+|+++.+  ++.++++
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~--~~~~~~~  103 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV---NKALMKLHYADLTDAS--SLRRWID  103 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC-----------CCEEEEECCTTCHH--HHHHHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccc---cccceEEEECCCCCHH--HHHHHHH
Confidence            6899999999999999999999999999998 4332     22211111100   12 6889999999988  8888887


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC----
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG----  154 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~----  154 (266)
                      .+     ++|+|||+|+....     ..+.++++..+++|+.++..+++++.+...++++.++||++||.......    
T Consensus       104 ~~-----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~  173 (381)
T 1n7h_A          104 VI-----KPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQ  173 (381)
T ss_dssp             HH-----CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSB
T ss_pred             hc-----CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCC
Confidence            65     69999999986321     12346688999999999999999999987553324799999997643210    


Q ss_pred             ----CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc---HHHHHHHh-hccC--------
Q 024517          155 ----LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ---ERAVKLVR-EAAP--------  218 (266)
Q Consensus       155 ----~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~-~~~~--------  218 (266)
                          +..+...|+.+|.+.+.+++.++.+++   +.+..+.|..+..|........   ..+..... ...+        
T Consensus       174 ~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~---~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~  250 (381)
T 1n7h_A          174 SETTPFHPRSPYAASKCAAHWYTVNYREAYG---LFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQ  250 (381)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC---CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTT
T ss_pred             CCCCCCCCCCchHHHHHHHHHHHHHHHHHhC---CcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCC
Confidence                134567899999999999999988864   3333333333322221110000   11111111 1111        


Q ss_pred             -CCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          219 -LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       219 -~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                       ...+..++ |+|++++++++...    ++.+.+.+|..++..+
T Consensus       251 ~~~~~v~v~-Dva~a~~~~~~~~~----~~~~~i~~~~~~s~~e  289 (381)
T 1n7h_A          251 ASRDWGFAG-DYVEAMWLMLQQEK----PDDYVVATEEGHTVEE  289 (381)
T ss_dssp             CEEECEEHH-HHHHHHHHHHTSSS----CCEEEECCSCEEEHHH
T ss_pred             ceeeeEEHH-HHHHHHHHHHhCCC----CCeEEeeCCCCCcHHH
Confidence             11234444 99999999997542    4788898887655443

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.87  E-value=1e-21  Score=169.01  Aligned_cols=220  Identities=14%  Similarity=0.148  Sum_probs=154.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++++|++|||||+|+||++++++|+++|++|+++++....              .++.++.+|+++.+  ++.++++   
T Consensus        16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~~--~~~~~~~---   76 (347)
T 4id9_A           16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDGQ--ALSDAIM---   76 (347)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCHH--HHHHHHT---
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCHH--HHHHHHh---
Confidence            3578899999999999999999999999999999843321              25678899999988  7776664   


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc--------
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER--------  153 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~--------  153 (266)
                          ++|++||+|+...       .+.++++..+++|+.++..+++++.+    .+ .++||++||......        
T Consensus        77 ----~~d~vih~A~~~~-------~~~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~V~~SS~~vyg~~~~~~~~~  140 (347)
T 4id9_A           77 ----GVSAVLHLGAFMS-------WAPADRDRMFAVNVEGTRRLLDAASA----AG-VRRFVFASSGEVYPENRPEFLPV  140 (347)
T ss_dssp             ----TCSEEEECCCCCC-------SSGGGHHHHHHHHTHHHHHHHHHHHH----TT-CSEEEEEEEGGGTTTTSCSSSSB
T ss_pred             ----CCCEEEECCcccC-------cchhhHHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEECCHHHhCCCCCCCCCc
Confidence                7999999998632       23345689999999999999998854    22 469999999644321        


Q ss_pred             ---CCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCccc-------------CCCccccc--------cc---
Q 024517          154 ---GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL-------------QDEYPIAV--------GQ---  206 (266)
Q Consensus       154 ---~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~-------------t~~~~~~~--------~~---  206 (266)
                         .+..+...|+.+|.+.+.+++.++.+   .+++++.|.|+.+.             .|......        ..   
T Consensus       141 ~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~  217 (347)
T 4id9_A          141 TEDHPLCPNSPYGLTKLLGEELVRFHQRS---GAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAI  217 (347)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHH---SSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHH
T ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHh---cCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHH
Confidence               01245678999999999999999887   47999999999998             33211100        00   


Q ss_pred             HHHHHHHhhccCCC---------CC----CCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCCc
Q 024517          207 ERAVKLVREAAPLH---------RW----LDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       207 ~~~~~~~~~~~~~~---------~~----~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      ..+........+..         .+    ..++ |+|++++.++....  ..|+.+++.+|..++..++
T Consensus       218 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~-Dva~ai~~~~~~~~--~~~~~~ni~~~~~~s~~e~  283 (347)
T 4id9_A          218 AELLQSRDIGEPSHILARNENGRPFRMHITDTR-DMVAGILLALDHPE--AAGGTFNLGADEPADFAAL  283 (347)
T ss_dssp             HHHHHHHCCSSCCEEEEECTTCCBCEECEEEHH-HHHHHHHHHHHCGG--GTTEEEEESCSSCEEHHHH
T ss_pred             HHHHHHHHcCCCeEEeCCCCcccCCccCcEeHH-HHHHHHHHHhcCcc--cCCCeEEECCCCcccHHHH
Confidence            11111111111111         11    3334 99999999997642  4589999998876664443

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.87  E-value=2.7e-21  Score=169.23  Aligned_cols=176  Identities=18%  Similarity=0.124  Sum_probs=131.7

Q ss_pred             CcEEEEecCCCchHHHHHHHHH-HcCCeEEEEec-ccc---------cHHHHHHHhcccCC--CCC---eEEEEEecCCC
Q 024517            5 AKRVLLTSDGDEISKNIAFHLA-KRGCRLVLVGN-ERR---------LSSVAEKMMGSLKG--GQP---VEVVGLDMEED   68 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~-~~g~~v~~~~~-~~~---------~~~~~~~~~~~~~~--~~~---~~~~~~D~~~~   68 (266)
                      ++++|||||+|+||++++++|+ ++|++|+++++ ...         .+.+.+.+.+....  ..+   +.++.+|+++.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4589999999999999999999 99999999884 332         23333223222110  124   88999999998


Q ss_pred             chHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           69 REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                      +  ++.+++++    ++++|+|||+|+.....     .+.++++..+++|+.++..+++++..    .+ .++||++||.
T Consensus        82 ~--~~~~~~~~----~~~~d~vih~A~~~~~~-----~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~iv~~SS~  145 (397)
T 1gy8_A           82 D--FLNGVFTR----HGPIDAVVHMCAFLAVG-----ESVRDPLKYYDNNVVGILRLLQAMLL----HK-CDKIIFSSSA  145 (397)
T ss_dssp             H--HHHHHHHH----SCCCCEEEECCCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEEEEG
T ss_pred             H--HHHHHHHh----cCCCCEEEECCCccCcC-----cchhhHHHHHHHHhHHHHHHHHHHHH----hC-CCEEEEECCH
Confidence            8  87777653    46699999999873211     13456788999999999999998643    22 4799999996


Q ss_pred             cccccCC----------------CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCC
Q 024517          149 IGAERGL----------------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDE  199 (266)
Q Consensus       149 ~~~~~~~----------------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~  199 (266)
                      .......                ..+...|+.+|.+.+.+++.++.++   |++++.|.|+.+.++.
T Consensus       146 ~v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          146 AIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (397)
T ss_dssp             GGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             HHhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence            5432210                0125789999999999999999986   7999999999998775

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.86  E-value=1.8e-21  Score=167.04  Aligned_cols=228  Identities=15%  Similarity=0.115  Sum_probs=154.5

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcC-------CeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRG-------CRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAF   73 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g-------~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v   73 (266)
                      .++++++|||||+|+||++++++|+++|       ++|++++ +.+...+       .  ...++.++.+|+++.+  ++
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-------~--~~~~~~~~~~Dl~d~~--~~   79 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-------G--FSGAVDARAADLSAPG--EA   79 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-------T--CCSEEEEEECCTTSTT--HH
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-------c--cCCceeEEEcCCCCHH--HH
Confidence            4678999999999999999999999999       8999988 4332221       0  1257889999999998  88


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc
Q 024517           74 DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER  153 (266)
Q Consensus        74 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~  153 (266)
                      .++++      +++|+|||+|+...      ..+.++++..+++|+.++..+++++.+...+.+..++||++||......
T Consensus        80 ~~~~~------~~~d~vih~A~~~~------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~  147 (342)
T 2hrz_A           80 EKLVE------ARPDVIFHLAAIVS------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGA  147 (342)
T ss_dssp             HHHHH------TCCSEEEECCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCS
T ss_pred             HHHHh------cCCCEEEECCccCc------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCC
Confidence            77775      47999999998631      1234678999999999999999998875432211379999999865432


Q ss_pred             CCCC----------CchhhHHhHHHHHHHHHHHHHHhC--CCCcEEEEEe--cCcccCCCcccccccHHHHHHHhhc---
Q 024517          154 GLYP----------GAAAYGACAASIHQLVRTAAMEIG--KHKIRVNGIA--RGLHLQDEYPIAVGQERAVKLVREA---  216 (266)
Q Consensus       154 ~~~~----------~~~~y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~--pG~v~t~~~~~~~~~~~~~~~~~~~---  216 (266)
                      . .+          +...|+.+|.+.+.+++.++.++.  ...+|++.|.  ||.+.++....   ...+.......   
T Consensus       148 ~-~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~---~~~~~~~~~~~~~~  223 (342)
T 2hrz_A          148 P-LPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGF---FSNILREPLVGQEA  223 (342)
T ss_dssp             S-CCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGH---HHHHHHHHHTTCCE
T ss_pred             C-CCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHH---HHHHHHHHhcCCCe
Confidence            1 11          567899999999999999887642  1236676666  77655432110   01111111111   


Q ss_pred             -cCCCC-----CCCChhhHHHHHHHHccCCCC-cccccEEEEcCCcccc
Q 024517          217 -APLHR-----WLDVKNDLASTVIYLISDGSR-YMTGTTIYVDGAQSIT  258 (266)
Q Consensus       217 -~~~~~-----~~~~~~dva~~~~~l~s~~~~-~~~G~~i~~dgG~~~~  258 (266)
                       .|...     +..+ +|+++.++.++..... ...|+.+++. |..++
T Consensus       224 ~~~~~~~~~~~~~~v-~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~s  270 (342)
T 2hrz_A          224 VLPVPESIRHWHASP-RSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSAT  270 (342)
T ss_dssp             EECSCTTCEEEEECH-HHHHHHHHHHHHSCHHHHCSCCEEECC-CEEEE
T ss_pred             eccCCCccceeeEeh-HHHHHHHHHHHhccccccCCccEEEcC-CCCCC
Confidence             12221     2334 4999999998864321 1146778884 44444

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.86  E-value=2.8e-21  Score=166.17  Aligned_cols=235  Identities=14%  Similarity=0.116  Sum_probs=159.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccc------cHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERR------LSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAV   77 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~   77 (266)
                      +|++|||||+|+||++++++|+++|++|+++++ ...      ..+..+++....  +.++.++.+|+++.+  ++.+++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~--~~~~~~   77 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT--GRSVEFEEMDILDQG--ALQRLF   77 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH--TCCCEEEECCTTCHH--HHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc--CCceEEEECCCCCHH--HHHHHH
Confidence            578999999999999999999999999999883 222      233333443211  247889999999988  888777


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---
Q 024517           78 DKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---  154 (266)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---  154 (266)
                      ++.     ++|+|||+|+.....     ...++++..+++|+.++..+++++..    .+ .+++|++||.......   
T Consensus        78 ~~~-----~~d~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~iv~~SS~~~~g~~~~~  142 (348)
T 1ek6_A           78 KKY-----SFMAVIHFAGLKAVG-----ESVQKPLDYYRVNLTGTIQLLEIMKA----HG-VKNLVFSSSATVYGNPQYL  142 (348)
T ss_dssp             HHC-----CEEEEEECCSCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEEEEGGGGCSCSSS
T ss_pred             Hhc-----CCCEEEECCCCcCcc-----chhhchHHHHHHHHHHHHHHHHHHHH----hC-CCEEEEECcHHHhCCCCCC
Confidence            652     799999999863211     13456788999999999999987643    22 4799999997653210   


Q ss_pred             ------C-CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCc----cccc----c--cHHHHHHHh-hc
Q 024517          155 ------L-YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY----PIAV----G--QERAVKLVR-EA  216 (266)
Q Consensus       155 ------~-~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~----~~~~----~--~~~~~~~~~-~~  216 (266)
                            + .+....|+.+|.+.+.+++.++.+  ..++++..+.|+.+..|..    ....    .  ......... ..
T Consensus       143 ~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~  220 (348)
T 1ek6_A          143 PLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRR  220 (348)
T ss_dssp             SBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSS
T ss_pred             CcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcC
Confidence                  0 123678999999999999999887  3469999999998887631    1000    0  011112111 11


Q ss_pred             cCC-----------C----CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          217 APL-----------H----RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       217 ~~~-----------~----~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      .+.           +    .+...+ |+|++++.++........++.+++.+|..++..+
T Consensus       221 ~~~~~~g~~~~~~~g~~~~~~i~v~-Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e  279 (348)
T 1ek6_A          221 EALNVFGNDYDTEDGTGVRDYIHVV-DLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQ  279 (348)
T ss_dssp             SCEEEECSCSSSSSSSCEECEEEHH-HHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHH
T ss_pred             CCeEEeCCcccCCCCceEEeeEEHH-HHHHHHHHHHhcccccCCceEEEeCCCCCccHHH
Confidence            111           0    123334 9999999988643212234899998876655433

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.86  E-value=4.7e-22  Score=171.86  Aligned_cols=225  Identities=12%  Similarity=0.123  Sum_probs=153.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcC-CeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRG-CRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++++++|||||+|+||++++++|+++| ++|+++++....... ..+       ..+. +.+|+++.+  +++++++.  
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-~~~-------~~~~-~~~d~~~~~--~~~~~~~~--  110 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VNL-------VDLN-IADYMDKED--FLIQIMAG--  110 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGG-GGT-------TTSC-CSEEEEHHH--HHHHHHTT--
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchh-hcc-------cCce-EeeecCcHH--HHHHHHhh--
Confidence            467899999999999999999999999 899998843322110 111       1222 678999877  77776653  


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC------
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL------  155 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~------  155 (266)
                      ..++++|+|||+|+....       ..++++..+++|+.++..+++++.+.    + . ++|++||........      
T Consensus       111 ~~~~~~d~Vih~A~~~~~-------~~~~~~~~~~~n~~~~~~ll~a~~~~----~-~-r~V~~SS~~v~g~~~~~~~~E  177 (357)
T 2x6t_A          111 EEFGDVEAIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER----E-I-PFLYASSAATYGGRTSDFIES  177 (357)
T ss_dssp             CCCSSCCEEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH----T-C-CEEEEEEGGGGCSCSSCCCSS
T ss_pred             cccCCCCEEEECCcccCC-------ccCCHHHHHHHHHHHHHHHHHHHHHc----C-C-eEEEEcchHHhCCCCCCCcCC
Confidence            124579999999987322       22356889999999999999998763    2 3 999999986543211      


Q ss_pred             ---CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc---c-cHHHHHHHhhccC----------
Q 024517          156 ---YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV---G-QERAVKLVREAAP----------  218 (266)
Q Consensus       156 ---~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~---~-~~~~~~~~~~~~~----------  218 (266)
                         ..+...|+.+|.+.+.+++.++.+   .|++++.|.||.+.+|......   . -..+........+          
T Consensus       178 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (357)
T 2x6t_A          178 REYEKPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENF  254 (357)
T ss_dssp             GGGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGC
T ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcc
Confidence               012568999999999999998876   4799999999999987643110   0 1112222221111          


Q ss_pred             CCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          219 LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       219 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      ...+..++ |+|+++.++++...    |+.+.+++|..++..+
T Consensus       255 ~~~~i~v~-Dva~ai~~~~~~~~----~~~~~i~~~~~~s~~e  292 (357)
T 2x6t_A          255 KRDFVYVG-DVADVNLWFLENGV----SGIFNLGTGRAESFQA  292 (357)
T ss_dssp             EECEEEHH-HHHHHHHHHHHHCC----CEEEEESCSCCEEHHH
T ss_pred             eEccEEHH-HHHHHHHHHHhcCC----CCeEEecCCCcccHHH
Confidence            11233444 99999999987543    8899998887665443

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.85  E-value=2.8e-21  Score=167.81  Aligned_cols=226  Identities=11%  Similarity=0.116  Sum_probs=159.3

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHc-CCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecC-CCchHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKR-GCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDME-EDREGAFDEAVDK   79 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~-g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~v~~~~~~   79 (266)
                      ++.+++|||||+|+||++++++|+++ |++|++++ +.++..+..    .    ..++.++.+|++ +.+  ++.++++ 
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----~----~~~v~~~~~Dl~~d~~--~~~~~~~-   90 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV----K----HERMHFFEGDITINKE--WVEYHVK-   90 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG----G----STTEEEEECCTTTCHH--HHHHHHH-
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc----c----CCCeEEEeCccCCCHH--HHHHHhc-
Confidence            56789999999999999999999999 99999999 444333221    1    158899999999 777  7777775 


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC---C
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL---Y  156 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~---~  156 (266)
                            ++|+|||+|+.....     ...++.+..+++|+.++..+++++...      +.++|++||........   .
T Consensus        91 ------~~d~Vih~A~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~~------~~~~v~~SS~~vyg~~~~~~~  153 (372)
T 3slg_A           91 ------KCDVILPLVAIATPA-----TYVKQPLRVFELDFEANLPIVRSAVKY------GKHLVFPSTSEVYGMCADEQF  153 (372)
T ss_dssp             ------HCSEEEECBCCCCHH-----HHHHCHHHHHHHHTTTTHHHHHHHHHH------TCEEEEECCGGGGBSCCCSSB
T ss_pred             ------cCCEEEEcCccccHH-----HHhhCHHHHHHHHHHHHHHHHHHHHHh------CCcEEEeCcHHHhCCCCCCCC
Confidence                  489999999873211     123456788899999999998888553      26999999964322110   0


Q ss_pred             -------------CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--------cHHHHHHHhh
Q 024517          157 -------------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--------QERAVKLVRE  215 (266)
Q Consensus       157 -------------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--------~~~~~~~~~~  215 (266)
                                   .+...|+.+|.+.+.+++.++.+    +++++.+.|+.+.+|.......        -..+......
T Consensus       154 ~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (372)
T 3slg_A          154 DPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVR  229 (372)
T ss_dssp             CTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHH
T ss_pred             CccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHc
Confidence                         23347999999999999988765    7999999999999886532110        1122222222


Q ss_pred             ccCCC---------CCCCChhhHHHHHHHHccCCCCcccccEEEEcC-CccccCCC
Q 024517          216 AAPLH---------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG-AQSITRPR  261 (266)
Q Consensus       216 ~~~~~---------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg-G~~~~~~~  261 (266)
                      ..+..         .+... +|+|++++.++........|+.+++.+ |..++..+
T Consensus       230 ~~~~~~~~~g~~~~~~i~v-~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e  284 (372)
T 3slg_A          230 GENISLVDGGSQKRAFTYV-DDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRE  284 (372)
T ss_dssp             TCCEEEGGGGCCEEECEEH-HHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHH
T ss_pred             CCCcEEeCCCceEEEEEEH-HHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHH
Confidence            22211         12234 499999999997654447899999988 55555433

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.85  E-value=1.1e-21  Score=166.96  Aligned_cols=217  Identities=16%  Similarity=0.130  Sum_probs=143.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccc----cHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERR----LSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      +|++|||||+|+||++++++|+++|++|+++.+ ...    .... ..+..   ...++.++.+|++|.+  +++++++ 
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~---~~~~~~~~~~Dl~d~~--~~~~~~~-   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPG---ASEKLHFFNADLSNPD--SFAAAIE-   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTT---HHHHEEECCCCTTCGG--GGHHHHT-
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-Hhhhc---cCCceEEEecCCCCHH--HHHHHHc-
Confidence            689999999999999999999999999998774 321    1111 11100   0125778889999988  7777764 


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHH-HHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC--
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDE-FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY--  156 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~--  156 (266)
                            .+|+|||+|+..    .   ...++ ++..+++|+.+++++++++.+.+   + .++||++||..+..+...  
T Consensus        74 ------~~d~vih~A~~~----~---~~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~-~~~iV~~SS~~~~~~~~~~~  136 (322)
T 2p4h_X           74 ------GCVGIFHTASPI----D---FAVSEPEEIVTKRTVDGALGILKACVNSK---T-VKRFIYTSSGSAVSFNGKDK  136 (322)
T ss_dssp             ------TCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHTTCS---S-CCEEEEEEEGGGTSCSSSCC
T ss_pred             ------CCCEEEEcCCcc----c---CCCCChHHHHHHHHHHHHHHHHHHHHhcC---C-ccEEEEeccHHHcccCCCCC
Confidence                  589999999631    1   11222 45689999999999999986541   2 479999999875432110  


Q ss_pred             ------------------CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccH--HHHHHHhh-
Q 024517          157 ------------------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE--RAVKLVRE-  215 (266)
Q Consensus       157 ------------------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~~~~~~~-  215 (266)
                                        +....|+.+|.+.+.+++.++.+   .|++++.|.||.+.+|.........  ........ 
T Consensus       137 ~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~  213 (322)
T 2p4h_X          137 DVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGK  213 (322)
T ss_dssp             SEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSC
T ss_pred             eecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCC
Confidence                              01116999999888888776654   5899999999999998754322111  01011111 


Q ss_pred             --ccCCC--CCCCChhhHHHHHHHHccCCCCcccccEEEEc
Q 024517          216 --AAPLH--RWLDVKNDLASTVIYLISDGSRYMTGTTIYVD  252 (266)
Q Consensus       216 --~~~~~--~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~d  252 (266)
                        ..+..  .+..++ |+|++++++++..  ..+|+ ++..
T Consensus       214 ~~~~~~~~~~~i~v~-Dva~a~~~~~~~~--~~~g~-~~~~  250 (322)
T 2p4h_X          214 KEQIGVTRFHMVHVD-DVARAHIYLLENS--VPGGR-YNCS  250 (322)
T ss_dssp             GGGCCEEEEEEEEHH-HHHHHHHHHHHSC--CCCEE-EECC
T ss_pred             CccCcCCCcCEEEHH-HHHHHHHHHhhCc--CCCCC-EEEc
Confidence              11111  245565 9999999999653  25776 4443

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.85  E-value=6.6e-21  Score=163.55  Aligned_cols=223  Identities=10%  Similarity=0.097  Sum_probs=154.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHc-CCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKR-GCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~-g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +++|||||+|+||++++++|+++ |++|++++ +.++.++.    ..    ..++.++.+|+++.++ .++++++     
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~----~~----~~~~~~~~~D~~~~~~-~~~~~~~-----   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----LN----HPHFHFVEGDISIHSE-WIEYHVK-----   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG----TT----CTTEEEEECCTTTCSH-HHHHHHH-----
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHh----hc----CCCeEEEeccccCcHH-HHHhhcc-----
Confidence            47999999999999999999998 89999998 44333221    11    2478899999998540 4555554     


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC-------
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY-------  156 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-------  156 (266)
                        ++|+|||+|+...+.     ...++++..+++|+.++..+++++.+    .  ++++|++||.........       
T Consensus        67 --~~d~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~~v~~SS~~v~g~~~~~~~~e~~  133 (345)
T 2bll_A           67 --KCDVVLPLVAIATPI-----EYTRNPLRVFELDFEENLRIIRYCVK----Y--RKRIIFPSTSEVYGMCSDKYFDEDH  133 (345)
T ss_dssp             --HCSEEEECBCCCCHH-----HHHHSHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEECCGGGGBTCCCSSBCTTT
T ss_pred             --CCCEEEEcccccCcc-----chhcCHHHHHHHHHHHHHHHHHHHHH----h--CCeEEEEecHHHcCCCCCCCcCCcc
Confidence              489999999863211     11345778899999999999888754    2  269999999754322100       


Q ss_pred             ---------CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc----c----cHHHHHHHhhccCC
Q 024517          157 ---------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV----G----QERAVKLVREAAPL  219 (266)
Q Consensus       157 ---------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~----~----~~~~~~~~~~~~~~  219 (266)
                               .....|+.+|.+.+.+++.++.++   |++++.|.||.+.+|......    .    -..+........+.
T Consensus       134 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (345)
T 2bll_A          134 SNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPI  210 (345)
T ss_dssp             CCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCE
T ss_pred             cccccCcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCc
Confidence                     112389999999999999998874   799999999999988643210    0    01222222222121


Q ss_pred             C---------CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCc-cccC
Q 024517          220 H---------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ-SITR  259 (266)
Q Consensus       220 ~---------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~-~~~~  259 (266)
                      .         .+..++ |+|+++..++.......+|+.+.+.+|. .++.
T Consensus       211 ~~~~~g~~~~~~i~v~-Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~  259 (345)
T 2bll_A          211 KLIDGGKQKRCFTDIR-DGIEALYRIIENAGNRCDGEIINIGNPENEASI  259 (345)
T ss_dssp             EEGGGSCCEEECEEHH-HHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEH
T ss_pred             EEECCCCEEEEEEEHH-HHHHHHHHHHhhccccCCCceEEeCCCCCCCCH
Confidence            1         133444 9999999999764444689999998874 4543

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.85  E-value=1.9e-20  Score=162.51  Aligned_cols=234  Identities=9%  Similarity=0.002  Sum_probs=150.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEecc-ccc-HHHHHHHhccc-CCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-RRL-SSVAEKMMGSL-KGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~-~~~-~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +|++|||||+|+||++++++|+++|++|+++++. +.. .+..+.+.... ..+.++.++.+|+++.+  ++.++++.. 
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~--~~~~~~~~~-   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTS--NLTRILREV-   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHH--HHHHHHHHH-
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHH--HHHHHHHhc-
Confidence            3789999999999999999999999999999843 221 11111111100 01247889999999988  888888765 


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-------
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-------  154 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-------  154 (266)
                          ++|++||+||....     ..+.++++..+++|+.++..+++++.+.+.+ + .+++|++||.......       
T Consensus        78 ----~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~~iv~~SS~~v~g~~~~~~~~E  146 (372)
T 1db3_A           78 ----QPDEVYNLGAMSHV-----AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-K-KTRFYQASTSELYGLVQEIPQKE  146 (372)
T ss_dssp             ----CCSEEEECCCCCTT-----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-T-TCEEEEEEEGGGGTTCCSSSBCT
T ss_pred             ----CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-C-CcEEEEeCChhhhCCCCCCCCCc
Confidence                69999999987322     1233457888999999999999999876533 1 3799999997543221       


Q ss_pred             --CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc---HHHHHHHh-hccCC---C-----
Q 024517          155 --LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ---ERAVKLVR-EAAPL---H-----  220 (266)
Q Consensus       155 --~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~-~~~~~---~-----  220 (266)
                        +..+...|+.+|.+.+.+++.++.++   ++.+..+.|..+..|........   ..+..... ...+.   +     
T Consensus       147 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~  223 (372)
T 1db3_A          147 TTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSL  223 (372)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCE
T ss_pred             cCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCce
Confidence              11346789999999999999999885   45555566555544432211100   11111111 11111   0     


Q ss_pred             -CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCC
Q 024517          221 -RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       221 -~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                       .+... +|+|++++.++....    ++.+++.+|..++..
T Consensus       224 ~~~i~v-~Dva~a~~~~~~~~~----~~~~ni~~~~~~s~~  259 (372)
T 1db3_A          224 RDWGHA-KDYVKMQWMMLQQEQ----PEDFVIATGVQYSVR  259 (372)
T ss_dssp             ECCEEH-HHHHHHHHHTTSSSS----CCCEEECCCCCEEHH
T ss_pred             eeeeEH-HHHHHHHHHHHhcCC----CceEEEcCCCceeHH
Confidence             12333 499999999886432    467888777655443

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.85  E-value=3.6e-20  Score=158.44  Aligned_cols=229  Identities=12%  Similarity=-0.002  Sum_probs=154.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-ccccc-HHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRL-SSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .++++|||||+|+||++++++|+++|++|++++ +.+.. ....+.+..    ..++.++.+|+++.+  ++.++++.. 
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~--~~~~~~~~~-   85 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGI----EGDIQYEDGDMADAC--SVQRAVIKA-   85 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTC----GGGEEEEECCTTCHH--HHHHHHHHH-
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccc----cCceEEEECCCCCHH--HHHHHHHHc-
Confidence            468899999999999999999999999999998 43322 111222211    246889999999988  888888765 


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC------
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL------  155 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~------  155 (266)
                          ++|+|||+|+....     ....++++..+++|+.++..+++++.+.    +..+++|++||........      
T Consensus        86 ----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~~~~E  152 (335)
T 1rpn_A           86 ----QPQEVYNLAAQSFV-----GASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQDE  152 (335)
T ss_dssp             ----CCSEEEECCSCCCH-----HHHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBCT
T ss_pred             ----CCCEEEECccccch-----hhhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCCCCCc
Confidence                69999999986321     1112356789999999999999998654    1126999999975532210      


Q ss_pred             ---CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccH---HHHHHHh-hccCCCC-------
Q 024517          156 ---YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE---RAVKLVR-EAAPLHR-------  221 (266)
Q Consensus       156 ---~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~---~~~~~~~-~~~~~~~-------  221 (266)
                         ..+...|+.+|.+.+.+++.++.++   ++++..+.|+.+..|.........   .+..... ...+...       
T Consensus       153 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~  229 (335)
T 1rpn_A          153 NTPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAK  229 (335)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCE
T ss_pred             ccCCCCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcce
Confidence               1235689999999999999998875   578888889888776543211111   1111111 1111111       


Q ss_pred             --CCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCC
Q 024517          222 --WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       222 --~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                        +... +|+|+++..++....    ++.+++.+|..++..
T Consensus       230 ~~~i~v-~Dva~a~~~~~~~~~----~~~~ni~~~~~~s~~  265 (335)
T 1rpn_A          230 RDWGFA-GDYVEAMWLMLQQDK----ADDYVVATGVTTTVR  265 (335)
T ss_dssp             EECEEH-HHHHHHHHHHHHSSS----CCCEEECCSCEEEHH
T ss_pred             eceEEH-HHHHHHHHHHHhcCC----CCEEEEeCCCCccHH
Confidence              2223 499999999987542    367888777655543

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.85  E-value=1.6e-21  Score=165.53  Aligned_cols=216  Identities=17%  Similarity=0.137  Sum_probs=123.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      +|++|||||+|+||++++++|+++|++|+++++....           +   +  ++.+|+++.+  ++.++++..    
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~---~--~~~~Dl~d~~--~~~~~~~~~----   59 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------P---K--FEQVNLLDSN--AVHHIIHDF----   59 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------------------------CHHHHHHH----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------C---C--eEEecCCCHH--HHHHHHHhh----
Confidence            5789999999999999999999999999999842211           0   1  6778999988  888887754    


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc--------CCC
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER--------GLY  156 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~--------~~~  156 (266)
                       ++|+|||+||....     ..+.++++..+++|+.++..+++++.+.      ++++|++||.....+        .+.
T Consensus        60 -~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~------~~~~v~~SS~~v~~~~~~~~~E~~~~  127 (315)
T 2ydy_A           60 -QPHVIVHCAAERRP-----DVVENQPDAASQLNVDASGNLAKEAAAV------GAFLIYISSDYVFDGTNPPYREEDIP  127 (315)
T ss_dssp             -CCSEEEECC------------------------CHHHHHHHHHHHHH------TCEEEEEEEGGGSCSSSCSBCTTSCC
T ss_pred             -CCCEEEECCcccCh-----hhhhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEchHHHcCCCCCCCCCCCCC
Confidence             69999999987322     1245678899999999999999999763      359999999875432        012


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHh-hc-------cCCCCCCCChhh
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR-EA-------APLHRWLDVKND  228 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~d  228 (266)
                      .+...|+.+|.+.+.+++.++.++  ..+|.+.|. |...++.. ...  ..+..... ..       .+...+..++ |
T Consensus       128 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~lR~~~v~-G~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~-D  200 (315)
T 2ydy_A          128 APLNLYGKTKLDGEKAVLENNLGA--AVLRIPILY-GEVEKLEE-SAV--TVMFDKVQFSNKSANMDHWQQRFPTHVK-D  200 (315)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHCTTC--EEEEECSEE-CSCSSGGG-STT--GGGHHHHHCCSSCEEEECSSBBCCEEHH-H
T ss_pred             CCcCHHHHHHHHHHHHHHHhCCCe--EEEeeeeee-CCCCcccc-cHH--HHHHHHHHhcCCCeeeccCceECcEEHH-H
Confidence            346789999999999998874332  234444444 44333100 110  01111111 11       1122344455 9


Q ss_pred             HHHHHHHHccCC-CCcccccEEEEcCCccccCCC
Q 024517          229 LASTVIYLISDG-SRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       229 va~~~~~l~s~~-~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      +|++++++++.. .....|+.+.+++|..++..+
T Consensus       201 va~a~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e  234 (315)
T 2ydy_A          201 VATVCRQLAEKRMLDPSIKGTFHWSGNEQMTKYE  234 (315)
T ss_dssp             HHHHHHHHHHHHHTCTTCCEEEECCCSCCBCHHH
T ss_pred             HHHHHHHHHHhhccccCCCCeEEEcCCCcccHHH
Confidence            999999998642 123578899999887665443

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.84  E-value=5.9e-20  Score=159.66  Aligned_cols=231  Identities=9%  Similarity=0.005  Sum_probs=154.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccc-----cHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERR-----LSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++|||||+|+||++++++|+++|++|+++++ .+.     ++.+.+.+...  ...++.++.+|++|.+  ++.++++.
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~Dl~d~~--~~~~~~~~  100 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH--IEGNMKLHYGDLTDST--CLVKIINE  100 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC-----------CEEEEECCTTCHH--HHHHHHHH
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc--cCCCceEEEccCCCHH--HHHHHHHh
Confidence            68999999999999999999999999999983 322     12111111000  1246889999999988  88888876


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-----
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-----  154 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-----  154 (266)
                      .     ++|+|||+||....     ..+.++++..+++|+.++..+++++.+...+ + .++||++||.......     
T Consensus       101 ~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~-~~~iv~~SS~~~~~~~~~~~~  168 (375)
T 1t2a_A          101 V-----KPTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVKTCGLI-N-SVKFYQASTSELYGKVQEIPQ  168 (375)
T ss_dssp             H-----CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-T-TCEEEEEEEGGGTCSCSSSSB
T ss_pred             c-----CCCEEEECCCcccc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-c-cceEEEecchhhhCCCCCCCC
Confidence            5     69999999986321     1234667889999999999999999876532 1 3799999997654321     


Q ss_pred             ----CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccH---HHHHHHh-hccCC---C---
Q 024517          155 ----LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE---RAVKLVR-EAAPL---H---  220 (266)
Q Consensus       155 ----~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~---~~~~~~~-~~~~~---~---  220 (266)
                          +..+...|+.+|.+.+.+++.++.++   ++.+..+.|+.+..|.........   .+..... ...+.   +   
T Consensus       169 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~  245 (375)
T 1t2a_A          169 KETTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLD  245 (375)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTT
T ss_pred             CccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCC
Confidence                12345789999999999999998875   577777887776665432211111   1111111 11111   1   


Q ss_pred             ---CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCC
Q 024517          221 ---RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       221 ---~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                         .+... +|+|++++.++....    ++.+.+.+|..++..
T Consensus       246 ~~~~~i~v-~Dva~a~~~~~~~~~----~~~~ni~~~~~~s~~  283 (375)
T 1t2a_A          246 AKRDWGHA-KDYVEAMWLMLQNDE----PEDFVIATGEVHSVR  283 (375)
T ss_dssp             CEECCEEH-HHHHHHHHHHHHSSS----CCCEEECCSCCEEHH
T ss_pred             ceeeeEEH-HHHHHHHHHHHhcCC----CceEEEeCCCcccHH
Confidence               12334 499999999986532    366777776655443

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.84  E-value=1.7e-20  Score=155.74  Aligned_cols=195  Identities=18%  Similarity=0.214  Sum_probs=142.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      .|++|||||+|+||++++++|+++|++|++++|.....     +      ..++.++.+|+++.+  ++.++++      
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~------~~~~~~~~~Dl~d~~--~~~~~~~------   62 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA-----A------EAHEEIVACDLADAQ--AVHDLVK------   62 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC-----C------CTTEEECCCCTTCHH--HHHHHHT------
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc-----c------CCCccEEEccCCCHH--HHHHHHc------
Confidence            36899999999999999999999999999998433211     0      035688899999987  7777664      


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC---------
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL---------  155 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~---------  155 (266)
                       ++|+|||+|+.. .        .++++..+++|+.++..+++++.+.    + .++||++||.......+         
T Consensus        63 -~~d~vi~~a~~~-~--------~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~iv~~SS~~~~~~~~~~~~~~E~~  127 (267)
T 3ay3_A           63 -DCDGIIHLGGVS-V--------ERPWNDILQANIIGAYNLYEAARNL----G-KPRIVFASSNHTIGYYPRTTRIDTEV  127 (267)
T ss_dssp             -TCSEEEECCSCC-S--------CCCHHHHHHHTHHHHHHHHHHHHHT----T-CCEEEEEEEGGGSTTSBTTSCBCTTS
T ss_pred             -CCCEEEECCcCC-C--------CCCHHHHHHHHHHHHHHHHHHHHHh----C-CCEEEEeCCHHHhCCCCCCCCCCCCC
Confidence             599999999873 1        2346789999999999999988652    2 47999999986543211         


Q ss_pred             -CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCccc-CCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHH
Q 024517          156 -YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL-QDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTV  233 (266)
Q Consensus       156 -~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  233 (266)
                       ..+...|+.+|.+.+.+++.++.+   .|++++.|.||.+. ++.      ....   .      ..+..++ |+|+.+
T Consensus       128 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~~~~~------~~~~---~------~~~~~~~-dva~~~  188 (267)
T 3ay3_A          128 PRRPDSLYGLSKCFGEDLASLYYHK---FDIETLNIRIGSCFPKPK------DARM---M------ATWLSVD-DFMRLM  188 (267)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHT---TCCCEEEEEECBCSSSCC------SHHH---H------HHBCCHH-HHHHHH
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHH---cCCCEEEEeceeecCCCC------CCCe---e------eccccHH-HHHHHH
Confidence             113578999999999999988654   58999999999984 332      1111   1      1134455 999999


Q ss_pred             HHHccCCCCcccccEEEEcCC
Q 024517          234 IYLISDGSRYMTGTTIYVDGA  254 (266)
Q Consensus       234 ~~l~s~~~~~~~G~~i~~dgG  254 (266)
                      ..++....  ..+..+.+.++
T Consensus       189 ~~~~~~~~--~~~~~~~~~~~  207 (267)
T 3ay3_A          189 KRAFVAPK--LGCTVVYGASA  207 (267)
T ss_dssp             HHHHHSSC--CCEEEEEECCS
T ss_pred             HHHHhCCC--CCceeEecCCC
Confidence            99987532  22345555443

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.84  E-value=2.7e-21  Score=156.56  Aligned_cols=204  Identities=9%  Similarity=0.033  Sum_probs=146.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      +++|||||+|+||++++++|+++|++|++++ +.++.++.          ..++.++.+|++|.+  ++.++++      
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----------~~~~~~~~~Dl~d~~--~~~~~~~------   66 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE----------NEHLKVKKADVSSLD--EVCEVCK------   66 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC----------CTTEEEECCCTTCHH--HHHHHHT------
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc----------cCceEEEEecCCCHH--HHHHHhc------
Confidence            7899999999999999999999999999999 43333211          157899999999988  8777764      


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC--------CC
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG--------LY  156 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~--------~~  156 (266)
                       ++|++||+||.. ..          ....+++|+.++..+++++.+    .+ .+++|++||.....+.        +.
T Consensus        67 -~~d~vi~~a~~~-~~----------~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~  129 (227)
T 3dhn_A           67 -GADAVISAFNPG-WN----------NPDIYDETIKVYLTIIDGVKK----AG-VNRFLMVGGAGSLFIAPGLRLMDSGE  129 (227)
T ss_dssp             -TCSEEEECCCC-----------------CCSHHHHHHHHHHHHHHH----TT-CSEEEEECCSTTSEEETTEEGGGTTC
T ss_pred             -CCCEEEEeCcCC-CC----------ChhHHHHHHHHHHHHHHHHHH----hC-CCEEEEeCChhhccCCCCCccccCCc
Confidence             689999999763 11          112677888888888887754    22 3699999998754431        11


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCC-----CCCCCChhhHHH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPL-----HRWLDVKNDLAS  231 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~dva~  231 (266)
                      .+...|+.+|.+.+.+.+.++++   .+++++.+.||.+.++......-.      .....+.     ..+..++ |+|+
T Consensus       130 ~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~~~~~~~~~------~~~~~~~~~~~~~~~i~~~-Dva~  199 (227)
T 3dhn_A          130 VPENILPGVKALGEFYLNFLMKE---KEIDWVFFSPAADMRPGVRTGRYR------LGKDDMIVDIVGNSHISVE-DYAA  199 (227)
T ss_dssp             SCGGGHHHHHHHHHHHHHTGGGC---CSSEEEEEECCSEEESCCCCCCCE------EESSBCCCCTTSCCEEEHH-HHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhc---cCccEEEEeCCcccCCCcccccee------ecCCCcccCCCCCcEEeHH-HHHH
Confidence            34678999999999998887663   589999999999987754321100      0011111     1123444 9999


Q ss_pred             HHHHHccCCCCcccccEEEEcCCcc
Q 024517          232 TVIYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       232 ~~~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      ++..++...  ...|+.+.+.+...
T Consensus       200 ai~~~l~~~--~~~g~~~~~~~~~~  222 (227)
T 3dhn_A          200 AMIDELEHP--KHHQERFTIGYLEH  222 (227)
T ss_dssp             HHHHHHHSC--CCCSEEEEEECCSC
T ss_pred             HHHHHHhCc--cccCcEEEEEeehh
Confidence            999999764  47899998866543

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.84  E-value=1.2e-19  Score=145.95  Aligned_cols=207  Identities=10%  Similarity=0.054  Sum_probs=128.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      ++|||||+|+||++++++|+++|++|++++| .++.++    +.      .++.++.+|++|.+  +         +.+.
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~----~~------~~~~~~~~D~~d~~--~---------~~~~   60 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ----TH------KDINILQKDIFDLT--L---------SDLS   60 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH----HC------SSSEEEECCGGGCC--H---------HHHT
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh----cc------CCCeEEeccccChh--h---------hhhc
Confidence            5999999999999999999999999999994 333222    21      36789999999998  5         2346


Q ss_pred             CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC----------
Q 024517           86 NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL----------  155 (266)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~----------  155 (266)
                      ++|++||+||.. ..             ....    .+..++.+++.+++.+ .+++|++||..+..+.+          
T Consensus        61 ~~d~vi~~ag~~-~~-------------~~~~----~~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~  121 (221)
T 3ew7_A           61 DQNVVVDAYGIS-PD-------------EAEK----HVTSLDHLISVLNGTV-SPRLLVVGGAASLQIDEDGNTLLESKG  121 (221)
T ss_dssp             TCSEEEECCCSS-TT-------------TTTS----HHHHHHHHHHHHCSCC-SSEEEEECCCC----------------
T ss_pred             CCCEEEECCcCC-cc-------------ccch----HHHHHHHHHHHHHhcC-CceEEEEecceEEEcCCCCccccccCC
Confidence            799999999872 11             0122    3445566667677664 58999999987654421          


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      ..+...|+.+|.+.+.+. .+..  ...+++++.|.||.+.++...... ................+..++ |+|++++.
T Consensus       122 ~~~~~~y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~i~~~-Dva~~~~~  196 (221)
T 3ew7_A          122 LREAPYYPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERTGD-YQIGKDHLLFGSDGNSFISME-DYAIAVLD  196 (221)
T ss_dssp             ---CCCSCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC----------------------CCCHH-HHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCccCc-eEeccccceecCCCCceEeHH-HHHHHHHH
Confidence            112455999999998873 2222  146899999999999987211100 000000000001112345555 99999999


Q ss_pred             HccCCCCcccccEEEEcCCccccCC
Q 024517          236 LISDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                      ++...  ...|+.+.+.+-...+.+
T Consensus       197 ~l~~~--~~~g~~~~~~~~~~~~~~  219 (221)
T 3ew7_A          197 EIERP--NHLNEHFTVAGKLEHHHH  219 (221)
T ss_dssp             HHHSC--SCTTSEEECCC-------
T ss_pred             HHhCc--cccCCEEEECCCCccccc
Confidence            99764  367899998766555443

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.84  E-value=4.5e-20  Score=156.41  Aligned_cols=216  Identities=13%  Similarity=0.109  Sum_probs=153.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      ++++|||||+|.||++++++|+++|++|++++|.....+    +       .++.++.+|++ .+  ++.++++      
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~-------~~~~~~~~Dl~-~~--~~~~~~~------   61 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA----I-------NDYEYRVSDYT-LE--DLINQLN------   61 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HH--HHHHHTT------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc----C-------CceEEEEcccc-HH--HHHHhhc------
Confidence            378999999999999999999999999999995432221    2       26788999999 77  7766664      


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---------C
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---------L  155 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~  155 (266)
                       ++|+|||+|+.....         +.+..+++|+.++..+++++...    + -+++|++||.......         +
T Consensus        62 -~~d~Vih~a~~~~~~---------~~~~~~~~n~~~~~~ll~a~~~~----~-~~r~v~~SS~~vyg~~~~~~~~E~~~  126 (311)
T 3m2p_A           62 -DVDAVVHLAATRGSQ---------GKISEFHDNEILTQNLYDACYEN----N-ISNIVYASTISAYSDETSLPWNEKEL  126 (311)
T ss_dssp             -TCSEEEECCCCCCSS---------SCGGGTHHHHHHHHHHHHHHHHT----T-CCEEEEEEEGGGCCCGGGCSBCTTSC
T ss_pred             -CCCEEEEccccCCCC---------ChHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEccHHHhCCCCCCCCCCCCC
Confidence             799999999874321         34556788999999888887542    2 3689999996543211         1


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCC---------CCCCh
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHR---------WLDVK  226 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  226 (266)
                      ..+...|+.+|.+.+.+++.++.+   .|++++.+.|+.+.++..........+........+...         +... 
T Consensus       127 ~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v-  202 (311)
T 3m2p_A          127 PLPDLMYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYA-  202 (311)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEH-
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEH-
Confidence            124578999999999999999886   589999999999998865432111222233222222111         1223 


Q ss_pred             hhHHHHHHHHccCCCCcccccEEEEcCCccccCCCc
Q 024517          227 NDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       227 ~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      +|+|+++..++....   .|+.+++.+|..++..++
T Consensus       203 ~Dva~a~~~~~~~~~---~~~~~~i~~~~~~s~~e~  235 (311)
T 3m2p_A          203 KDAAKSVIYALKQEK---VSGTFNIGSGDALTNYEV  235 (311)
T ss_dssp             HHHHHHHHHHTTCTT---CCEEEEECCSCEECHHHH
T ss_pred             HHHHHHHHHHHhcCC---CCCeEEeCCCCcccHHHH
Confidence            499999999997643   789999988877665443

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.83  E-value=2.2e-20  Score=159.42  Aligned_cols=226  Identities=11%  Similarity=0.113  Sum_probs=155.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      +++|||||+|+||++++++|+++|++|+++++ .....   +.    ..  .++.++.+|+++.+  ++.+++++     
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~----~~--~~~~~~~~D~~~~~--~~~~~~~~-----   65 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DA----IT--EGAKFYNGDLRDKA--FLRDVFTQ-----   65 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GG----SC--TTSEEEECCTTCHH--HHHHHHHH-----
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hh----cC--CCcEEEECCCCCHH--HHHHHHhh-----
Confidence            57999999999999999999999999999884 33222   11    11  26788999999988  88777765     


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---------C
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---------L  155 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~  155 (266)
                      .++|+|||+|+.....     .+.++++..+++|+.++..+++++..    .+ .+++|++||.......         +
T Consensus        66 ~~~d~vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~E~~~  135 (330)
T 2c20_A           66 ENIEAVMHFAADSLVG-----VSMEKPLQYYNNNVYGALCLLEVMDE----FK-VDKFIFSSTAATYGEVDVDLITEETM  135 (330)
T ss_dssp             SCEEEEEECCCCCCHH-----HHHHSHHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEECCGGGGCSCSSSSBCTTSC
T ss_pred             cCCCEEEECCcccCcc-----ccccCHHHHHHHHhHHHHHHHHHHHH----cC-CCEEEEeCCceeeCCCCCCCCCcCCC
Confidence            4799999999863211     13456788999999999999988743    22 4699999997653211         1


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc-------c--cHHHHHHHhhccC-C------
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV-------G--QERAVKLVREAAP-L------  219 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-------~--~~~~~~~~~~~~~-~------  219 (266)
                      ..+...|+.+|.+.+.+++.++.++   |++++.+.||.+.++......       .  ...+........+ .      
T Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  212 (330)
T 2c20_A          136 TNPTNTYGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDD  212 (330)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSC
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCc
Confidence            1246789999999999999998764   799999999999887521111       0  0111111111111 1      


Q ss_pred             -----C----CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          220 -----H----RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       220 -----~----~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                           +    .+... +|+|+++..++........|+.+++.+|..++..+
T Consensus       213 ~~~~~g~~~~~~v~v-~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  262 (330)
T 2c20_A          213 YNTPDGTCIRDYIHV-EDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKE  262 (330)
T ss_dssp             CSSSSSSCEECEEEH-HHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHH
T ss_pred             cccCCCceeEeeEeH-HHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHH
Confidence                 0    12223 49999999888642222246889887776655433

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.83  E-value=2.7e-20  Score=173.18  Aligned_cols=225  Identities=9%  Similarity=0.095  Sum_probs=157.8

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHc-CCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHH-HHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKR-GCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGA-FDEAVDK   79 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~-g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-v~~~~~~   79 (266)
                      ++++++|||||+|+||++++++|+++ |++|++++ +.+..++    +.    ...++.++.+|+++.+  + ++++++ 
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~----~~----~~~~v~~v~~Dl~d~~--~~~~~~~~-  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR----FL----NHPHFHFVEGDISIHS--EWIEYHVK-  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGG----GT----TCTTEEEEECCTTTCH--HHHHHHHH-
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhh----hc----cCCceEEEECCCCCcH--HHHHHhhc-
Confidence            36789999999999999999999998 89999998 4433321    11    1257889999999976  4 444443 


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC----
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL----  155 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~----  155 (266)
                            ++|+|||+|+.....     ...++++..+++|+.++..+++++.+.      ++++|++||........    
T Consensus       382 ------~~D~Vih~Aa~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~aa~~~------~~r~V~~SS~~vyg~~~~~~~  444 (660)
T 1z7e_A          382 ------KCDVVLPLVAIATPI-----EYTRNPLRVFELDFEENLRIIRYCVKY------RKRIIFPSTSEVYGMCSDKYF  444 (660)
T ss_dssp             ------HCSEEEECCCCCCTH-----HHHHSHHHHHHHHTHHHHHHHHHHHHT------TCEEEEECCGGGGBTCCSSSB
T ss_pred             ------CCCEEEECceecCcc-----ccccCHHHHHHhhhHHHHHHHHHHHHh------CCEEEEEecHHHcCCCCCccc
Confidence                  589999999863210     123457889999999999998888652      26999999976532210    


Q ss_pred             ---C---------CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc------c--cHHHHHHHhh
Q 024517          156 ---Y---------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV------G--QERAVKLVRE  215 (266)
Q Consensus       156 ---~---------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~------~--~~~~~~~~~~  215 (266)
                         .         .....|+.+|.+.+.+++.++.++   |++++.|.||.+.++......      .  ...+......
T Consensus       445 ~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~  521 (660)
T 1z7e_A          445 DEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVE  521 (660)
T ss_dssp             CTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHH
T ss_pred             CCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHc
Confidence               0         123379999999999999998874   799999999999988653210      0  1122222222


Q ss_pred             ccCCC---------CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCc-cccC
Q 024517          216 AAPLH---------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ-SITR  259 (266)
Q Consensus       216 ~~~~~---------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~-~~~~  259 (266)
                      ..+..         .+..++ |+|++++++++......+|+.+.+++|. .++.
T Consensus       522 g~~~~~~g~g~~~~~~i~v~-Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~  574 (660)
T 1z7e_A          522 GSPIKLIDGGKQKRCFTDIR-DGIEALYRIIENAGNRCDGEIINIGNPENEASI  574 (660)
T ss_dssp             TCCEEEEGGGCCEEECEEHH-HHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEH
T ss_pred             CCCcEEeCCCCeEEEEEEHH-HHHHHHHHHHhCccccCCCeEEEECCCCCCcCH
Confidence            22211         133344 9999999999765445789999999885 4443

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.83  E-value=8.1e-20  Score=156.94  Aligned_cols=222  Identities=14%  Similarity=0.136  Sum_probs=150.4

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++++++|||||+|+||++++++|+++|++|+++++. ....+..+.+.    ...++.++.+|+.+..            
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~------------   88 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI----GHENFELINHDVVEPL------------   88 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT----TCTTEEEEECCTTSCC------------
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc----cCCceEEEeCccCChh------------
Confidence            568899999999999999999999999999998843 22221111111    1247889999998754            


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc--------
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER--------  153 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~--------  153 (266)
                        +.++|+|||+|+..... .    ..++++..+++|+.++..+++++.+.      +.++|++||......        
T Consensus        89 --~~~~d~vih~A~~~~~~-~----~~~~~~~~~~~n~~~~~~l~~a~~~~------~~~~v~~SS~~v~g~~~~~~~~E  155 (343)
T 2b69_A           89 --YIEVDQIYHLASPASPP-N----YMYNPIKTLKTNTIGTLNMLGLAKRV------GARLLLASTSEVYGDPEVHPQSE  155 (343)
T ss_dssp             --CCCCSEEEECCSCCSHH-H----HTTCHHHHHHHHHHHHHHHHHHHHHH------TCEEEEEEEGGGGBSCSSSSBCT
T ss_pred             --hcCCCEEEECccccCch-h----hhhCHHHHHHHHHHHHHHHHHHHHHh------CCcEEEECcHHHhCCCCCCCCcc
Confidence              35799999999863211 0    11245678999999999999988653      258999999754321        


Q ss_pred             ------CCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--cHHHHHHHhhccCCC-----
Q 024517          154 ------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKLVREAAPLH-----  220 (266)
Q Consensus       154 ------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~-----  220 (266)
                            .+..+...|+.+|.+.+.+++.++.++   +++++.+.||.+.+|.......  -..+........+..     
T Consensus       156 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (343)
T 2b69_A          156 DYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSG  232 (343)
T ss_dssp             TCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSS
T ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCC
Confidence                  012345689999999999999998774   7999999999999886432111  111222222211111     


Q ss_pred             ----CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          221 ----RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       221 ----~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                          .+... +|+|+++..++...    .|+.+.+.+|..++..+
T Consensus       233 ~~~~~~v~v-~Dva~a~~~~~~~~----~~~~~~i~~~~~~s~~e  272 (343)
T 2b69_A          233 SQTRAFQYV-SDLVNGLVALMNSN----VSSPVNLGNPEEHTILE  272 (343)
T ss_dssp             CCEEECEEH-HHHHHHHHHHHTSS----CCSCEEESCCCEEEHHH
T ss_pred             CeEEeeEeH-HHHHHHHHHHHhcC----CCCeEEecCCCCCcHHH
Confidence                12334 49999999998653    26778888877655433

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.83  E-value=1.4e-19  Score=146.13  Aligned_cols=196  Identities=10%  Similarity=0.053  Sum_probs=132.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      ++|||||+|+||++++++|+++|++|++++|. ++..    .+.     ..++.++.+|++|.+  +         +.++
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~----~~~-----~~~~~~~~~D~~d~~--~---------~~~~   61 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAA----DRL-----GATVATLVKEPLVLT--E---------ADLD   61 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HHT-----CTTSEEEECCGGGCC--H---------HHHT
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccc----ccc-----CCCceEEeccccccc--H---------hhcc
Confidence            49999999999999999999999999999843 3222    221     247889999999998  5         2346


Q ss_pred             CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCC--------
Q 024517           86 NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP--------  157 (266)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~--------  157 (266)
                      ++|++||+||.. ....    .       ...|+.+    .+.+++.+++.+  +++|++||..+.......        
T Consensus        62 ~~d~vi~~ag~~-~~~~----~-------~~~n~~~----~~~l~~a~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~~  123 (224)
T 3h2s_A           62 SVDAVVDALSVP-WGSG----R-------GYLHLDF----ATHLVSLLRNSD--TLAVFILGSASLAMPGADHPMILDFP  123 (224)
T ss_dssp             TCSEEEECCCCC-TTSS----C-------THHHHHH----HHHHHHTCTTCC--CEEEEECCGGGSBCTTCSSCGGGGCC
T ss_pred             cCCEEEECCccC-CCcc----h-------hhHHHHH----HHHHHHHHHHcC--CcEEEEecceeeccCCCCccccccCC
Confidence            899999999873 1110    0       1234444    455666666554  899999998765542110        


Q ss_pred             ----CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccC----CCCCCCChhhH
Q 024517          158 ----GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAP----LHRWLDVKNDL  229 (266)
Q Consensus       158 ----~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dv  229 (266)
                          ....|+.+|.+.+.+ +   ......+++++.|.||.+.++.....+.      ......+    ...+..++ |+
T Consensus       124 ~~~~~~~~y~~sK~~~e~~-~---~~~~~~~i~~~ivrp~~v~g~~~~~~~~------~~~~~~~~~~~~~~~i~~~-Dv  192 (224)
T 3h2s_A          124 ESAASQPWYDGALYQYYEY-Q---FLQMNANVNWIGISPSEAFPSGPATSYV------AGKDTLLVGEDGQSHITTG-NM  192 (224)
T ss_dssp             GGGGGSTTHHHHHHHHHHH-H---HHTTCTTSCEEEEEECSBCCCCCCCCEE------EESSBCCCCTTSCCBCCHH-HH
T ss_pred             CCCccchhhHHHHHHHHHH-H---HHHhcCCCcEEEEcCccccCCCcccCce------ecccccccCCCCCceEeHH-HH
Confidence                167899999998854 2   2223568999999999999873221110      0001111    12345555 99


Q ss_pred             HHHHHHHccCCCCcccccEEEEcC
Q 024517          230 ASTVIYLISDGSRYMTGTTIYVDG  253 (266)
Q Consensus       230 a~~~~~l~s~~~~~~~G~~i~~dg  253 (266)
                      |++++.++...  ...|+.+.+.+
T Consensus       193 A~~~~~~l~~~--~~~g~~~~~~~  214 (224)
T 3h2s_A          193 ALAILDQLEHP--TAIRDRIVVRD  214 (224)
T ss_dssp             HHHHHHHHHSC--CCTTSEEEEEE
T ss_pred             HHHHHHHhcCc--cccCCEEEEec
Confidence            99999999764  36788888843

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.83  E-value=1.3e-20  Score=158.16  Aligned_cols=202  Identities=15%  Similarity=0.148  Sum_probs=145.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ..+++|||||+|+||++++++|+++|++|++++|.                       .+|+++.+  ++.++++..   
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~~--~~~~~~~~~---   62 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVL--AVNKFFNEK---   62 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHH--HHHHHHHHH---
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCHH--HHHHHHHhc---
Confidence            46789999999999999999999999999998853                       16999988  888877654   


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC--------
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL--------  155 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~--------  155 (266)
                        ++|++||+|+....     ....++++..+++|+.++..+++++.+.    +  .++|++||.....+..        
T Consensus        63 --~~d~vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~--~~iv~~SS~~v~~~~~~~~~~E~~  129 (292)
T 1vl0_A           63 --KPNVVINCAAHTAV-----DKCEEQYDLAYKINAIGPKNLAAAAYSV----G--AEIVQISTDYVFDGEAKEPITEFD  129 (292)
T ss_dssp             --CCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHH----T--CEEEEEEEGGGSCSCCSSCBCTTS
T ss_pred             --CCCEEEECCccCCH-----HHHhcCHHHHHHHHHHHHHHHHHHHHHc----C--CeEEEechHHeECCCCCCCCCCCC
Confidence              69999999986321     1234678899999999999999998763    2  4999999976533210        


Q ss_pred             -CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCC-------CCCCCChh
Q 024517          156 -YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPL-------HRWLDVKN  227 (266)
Q Consensus       156 -~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~  227 (266)
                       ..+...|+.+|.+.+.+++.++.       .+..|.|+.+.++ ....  ...+........+.       ..+..++ 
T Consensus       130 ~~~~~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~-  198 (292)
T 1vl0_A          130 EVNPQSAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD-GNNF--VKTMINLGKTHDELKVVHDQVGTPTSTV-  198 (292)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS-SSCH--HHHHHHHHHHCSEEEEESSCEECCEEHH-
T ss_pred             CCCCccHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC-CcCh--HHHHHHHHhcCCcEEeecCeeeCCccHH-
Confidence             11356899999999999987643       3677888888766 2211  11122222111111       2233445 


Q ss_pred             hHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          228 DLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       228 dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      |+|+++.++++..    .|+.+.+++|..++..+
T Consensus       199 Dva~~~~~~~~~~----~~~~~~i~~~~~~s~~e  228 (292)
T 1vl0_A          199 DLARVVLKVIDEK----NYGTFHCTCKGICSWYD  228 (292)
T ss_dssp             HHHHHHHHHHHHT----CCEEEECCCBSCEEHHH
T ss_pred             HHHHHHHHHHhcC----CCcEEEecCCCCccHHH
Confidence            9999999999763    68899999887665443

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.82  E-value=5.2e-20  Score=155.88  Aligned_cols=221  Identities=11%  Similarity=0.071  Sum_probs=152.5

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHc--CCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKR--GCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++++|||||+|+||++++++|+++  |++|+++++.....+.    .      .++.++.+|++|.+  ++.+++++.  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~----~------~~~~~~~~D~~d~~--~~~~~~~~~--   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDV----V------NSGPFEVVNALDFN--QIEHLVEVH--   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHH----H------HSSCEEECCTTCHH--HHHHHHHHT--
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccc----c------CCCceEEecCCCHH--HHHHHHhhc--
Confidence            478999999999999999999999  8999999843222221    1      14568899999988  888877643  


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC-------
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL-------  155 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~-------  155 (266)
                         ++|++||+|+....      ...++++..+++|+.++..+++++.+    .+ .+++|++||........       
T Consensus        68 ---~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~e  133 (312)
T 2yy7_A           68 ---KITDIYLMAALLSA------TAEKNPAFAWDLNMNSLFHVLNLAKA----KK-IKKIFWPSSIAVFGPTTPKENTPQ  133 (312)
T ss_dssp             ---TCCEEEECCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHT----TS-CSEEECCEEGGGCCTTSCSSSBCS
T ss_pred             ---CCCEEEECCccCCC------chhhChHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEeccHHHhCCCCCCCCccc
Confidence               69999999986311      12356788999999999999988854    22 36999999986543210       


Q ss_pred             ---CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-----cHHHHHHHhhc-cC-CC-----
Q 024517          156 ---YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-----QERAVKLVREA-AP-LH-----  220 (266)
Q Consensus       156 ---~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-----~~~~~~~~~~~-~~-~~-----  220 (266)
                         ..+...|+.+|.+.+.+++.++.++   |++++.+.||.+.++.......     ...+....... .+ ..     
T Consensus       134 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (312)
T 2yy7_A          134 YTIMEPSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETK  210 (312)
T ss_dssp             SCBCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCC
T ss_pred             cCcCCCCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCce
Confidence               1235689999999999999998775   7999999999998865322110     11111111111 10 00     


Q ss_pred             -CCCCChhhHHHHHHHHccCCCCcc-cccEEEEcCCcccc
Q 024517          221 -RWLDVKNDLASTVIYLISDGSRYM-TGTTIYVDGAQSIT  258 (266)
Q Consensus       221 -~~~~~~~dva~~~~~l~s~~~~~~-~G~~i~~dgG~~~~  258 (266)
                       .+... +|+|+++..++....... .|+.+++.+ ..++
T Consensus       211 ~~~i~v-~Dva~a~~~~~~~~~~~~~~~~~~ni~~-~~~s  248 (312)
T 2yy7_A          211 MPMMYM-DDAIDATINIMKAPVEKIKIHSSYNLAA-MSFT  248 (312)
T ss_dssp             EEEEEH-HHHHHHHHHHHHSCGGGCCCSSCEECCS-EEEC
T ss_pred             eeeeeH-HHHHHHHHHHHhCcccccccCceEEeCC-CccC
Confidence             11223 499999999987543333 258888864 4443

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.82  E-value=1.7e-19  Score=154.58  Aligned_cols=171  Identities=14%  Similarity=0.127  Sum_probs=124.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      ++|||||+|+||++++++|+++|++|+++++ .....+..+.+....  +.++.++.+|+++.+  ++.++++.     .
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~--~~~~~~~~-----~   72 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEA--LMTEILHD-----H   72 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHH--HHHHHHHH-----T
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc--CCcceEEEccCCCHH--HHHHHhhc-----c
Confidence            6999999999999999999999999999873 222222222332211  246788999999988  88777764     2


Q ss_pred             CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---------CC
Q 024517           86 NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---------LY  156 (266)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~~  156 (266)
                      ++|+|||+||.....     ...++.+..+++|+.++..+++++..    .+ .++||++||.......         +.
T Consensus        73 ~~D~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~  142 (338)
T 1udb_A           73 AIDTVIHFAGLKAVG-----ESVQKPLEYYDNNVNGTLRLISAMRA----AN-VKNFIFSSSATVYGDNPKIPYVESFPT  142 (338)
T ss_dssp             TCSEEEECCSCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHH----HT-CCEEEEEEEGGGGCSCCSSSBCTTSCC
T ss_pred             CCCEEEECCccCccc-----cchhcHHHHHHHHHHHHHHHHHHHHh----cC-CCeEEEEccHHHhCCCCCCCcCcccCC
Confidence            699999999863211     12345677899999999999886543    23 4799999997643210         01


Q ss_pred             -CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCC
Q 024517          157 -PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD  198 (266)
Q Consensus       157 -~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~  198 (266)
                       +....|+.+|++.+.+++.++.++  .++++..+.|+.+..+
T Consensus       143 ~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~  183 (338)
T 1udb_A          143 GTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGA  183 (338)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECC
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCC
Confidence             236789999999999999998874  3688888888766544

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.82  E-value=1.7e-20  Score=160.71  Aligned_cols=216  Identities=13%  Similarity=0.121  Sum_probs=140.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHH--HHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSV--AEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +|++|||||+|+||++++++|+++|++|+++. +.+...+.  ...+..    ..++.++.+|+++.+  ++.++++   
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~--~~~~~~~---   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQE----LGDLKIFRADLTDEL--SFEAPIA---   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGG----GSCEEEEECCTTTSS--SSHHHHT---
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCC----CCcEEEEecCCCChH--HHHHHHc---
Confidence            57899999999999999999999999999877 43332211  112221    146888999999988  7776663   


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-------
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-------  154 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-------  154 (266)
                          ++|+|||+|+.. .   ..  ..+..+..+++|+.++.++++++.+..   + .++||++||..+..+.       
T Consensus        80 ----~~D~Vih~A~~~-~---~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~---~-v~r~V~~SS~~~~~~~~~~~~~~  145 (338)
T 2rh8_A           80 ----GCDFVFHVATPV-H---FA--SEDPENDMIKPAIQGVVNVMKACTRAK---S-VKRVILTSSAAAVTINQLDGTGL  145 (338)
T ss_dssp             ----TCSEEEEESSCC-C---C-----------CHHHHHHHHHHHHHHHHCT---T-CCEEEEECCHHHHHHHHHTCSCC
T ss_pred             ----CCCEEEEeCCcc-C---CC--CCCcHHHHHHHHHHHHHHHHHHHHHcC---C-cCEEEEEecHHHeecCCcCCCCc
Confidence                589999999752 1   11  111224588999999999999987643   1 3699999997642110       


Q ss_pred             CC------------C---CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccH--HH--------
Q 024517          155 LY------------P---GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE--RA--------  209 (266)
Q Consensus       155 ~~------------~---~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~--------  209 (266)
                      ..            +   ....|+.+|.+.+.+++.++.+   .|++++.|.||.|.+|.........  ..        
T Consensus       146 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~  222 (338)
T 2rh8_A          146 VVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNE  222 (338)
T ss_dssp             CCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCH
T ss_pred             ccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCc
Confidence            00            0   1115999999999999887765   3799999999999998754321110  00        


Q ss_pred             --HHHHhhc-cCCC--CCCCChhhHHHHHHHHccCCCCcccccEE
Q 024517          210 --VKLVREA-APLH--RWLDVKNDLASTVIYLISDGSRYMTGTTI  249 (266)
Q Consensus       210 --~~~~~~~-~~~~--~~~~~~~dva~~~~~l~s~~~~~~~G~~i  249 (266)
                        ....... .+.+  .+..++ |+|++++++++..  ..+|..+
T Consensus       223 ~~~~~~~~~~~~~~~~~~i~v~-Dva~a~~~~~~~~--~~~~~~~  264 (338)
T 2rh8_A          223 FLINGMKGMQMLSGSVSIAHVE-DVCRAHIFVAEKE--SASGRYI  264 (338)
T ss_dssp             HHHHHHHHHHHHHSSEEEEEHH-HHHHHHHHHHHCT--TCCEEEE
T ss_pred             cccccccccccccCcccEEEHH-HHHHHHHHHHcCC--CcCCcEE
Confidence              0000000 0001  245666 9999999998653  2456543

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.81  E-value=4.9e-21  Score=153.62  Aligned_cols=200  Identities=11%  Similarity=0.096  Sum_probs=141.5

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCC--eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGC--RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |+..+++++||||+|+||++++++|+++|+  +|++++|....        .    ..++.++.+|+++.+  ++.+++ 
T Consensus         1 M~~~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~--------~----~~~~~~~~~D~~~~~--~~~~~~-   65 (215)
T 2a35_A            1 MHSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA--------E----HPRLDNPVGPLAELL--PQLDGS-   65 (215)
T ss_dssp             ---CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC--------C----CTTEECCBSCHHHHG--GGCCSC-
T ss_pred             CCCCCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc--------c----CCCceEEeccccCHH--HHHHhh-
Confidence            666688999999999999999999999998  99998843322        0    146788889999877  655544 


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                              +|++||++|....       +.++++..+++|+.++..+++++.+.    + .+++|++||.....    +.
T Consensus        66 --------~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~Ss~~~~~----~~  121 (215)
T 2a35_A           66 --------IDTAFCCLGTTIK-------EAGSEEAFRAVDFDLPLAVGKRALEM----G-ARHYLVVSALGADA----KS  121 (215)
T ss_dssp             --------CSEEEECCCCCHH-------HHSSHHHHHHHHTHHHHHHHHHHHHT----T-CCEEEEECCTTCCT----TC
T ss_pred             --------hcEEEECeeeccc-------cCCCHHHHHHhhHHHHHHHHHHHHHc----C-CCEEEEECCcccCC----CC
Confidence                    8999999986311       23457888999999999999987543    2 46899999976543    33


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcE-EEEEecCcccCCCcccccccHHHHHHHhhccCCC----CCCCChhhHHHHH
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIR-VNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH----RWLDVKNDLASTV  233 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~-v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~dva~~~  233 (266)
                      ...|+.+|.+.+.+++.       .|++ ++.|.||.+.++.......+ ...   ....|..    .+..+ +|+|+.+
T Consensus       122 ~~~y~~sK~~~e~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~~~-~~~---~~~~~~~~~~~~~i~~-~Dva~~~  189 (215)
T 2a35_A          122 SIFYNRVKGELEQALQE-------QGWPQLTIARPSLLFGPREEFRLAE-ILA---APIARILPGKYHGIEA-CDLARAL  189 (215)
T ss_dssp             SSHHHHHHHHHHHHHTT-------SCCSEEEEEECCSEESTTSCEEGGG-GTT---CCCC----CHHHHHHH-HHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHH-------cCCCeEEEEeCceeeCCCCcchHHH-HHH---HhhhhccCCCcCcEeH-HHHHHHH
Confidence            56899999999988764       3798 99999999998864321100 000   0001110    12233 4999999


Q ss_pred             HHHccCCCCcccccEEEEcCCc
Q 024517          234 IYLISDGSRYMTGTTIYVDGAQ  255 (266)
Q Consensus       234 ~~l~s~~~~~~~G~~i~~dgG~  255 (266)
                      ..++....    ++.+.+.++.
T Consensus       190 ~~~~~~~~----~~~~~i~~~~  207 (215)
T 2a35_A          190 WRLALEEG----KGVRFVESDE  207 (215)
T ss_dssp             HHHHTCCC----SEEEEEEHHH
T ss_pred             HHHHhcCC----CCceEEcHHH
Confidence            99997642    6777776654

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.81  E-value=2.4e-19  Score=151.51  Aligned_cols=222  Identities=13%  Similarity=0.131  Sum_probs=149.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcC-CeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRG-CRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      ++|||||+|+||++++++|+++| ++|+++++....... ..+.       .+. +.+|+++.+  +++++++...  ++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-~~~~-------~~~-~~~d~~~~~--~~~~~~~~~~--~~   67 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VNLV-------DLN-IADYMDKED--FLIQIMAGEE--FG   67 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-HHHH-------TSC-CSEEEEHHH--HHHHHHTTCC--CS
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchh-hhcC-------cce-eccccccHH--HHHHHHhccc--cC
Confidence            48999999999999999999999 899998843322111 1121       112 668998877  6666654110  23


Q ss_pred             CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC---------C
Q 024517           86 NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL---------Y  156 (266)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~---------~  156 (266)
                      ++|++||+|+....       ..++++..+++|+.++..+++++.+.    + . ++|++||........         .
T Consensus        68 ~~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~-~~v~~SS~~v~g~~~~~~~~E~~~~  134 (310)
T 1eq2_A           68 DVEAIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER----E-I-PFLYASSAATYGGRTSDFIESREYE  134 (310)
T ss_dssp             SCCEEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH----T-C-CEEEEEEGGGGTTCCSCBCSSGGGC
T ss_pred             CCcEEEECcccccC-------cccCHHHHHHHHHHHHHHHHHHHHHc----C-C-eEEEEeeHHHhCCCCCCCCCCCCCC
Confidence            69999999986322       22346788999999999999988653    3 4 999999985432210         1


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc---c-cHHHHHHHhhccC----------CCCC
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV---G-QERAVKLVREAAP----------LHRW  222 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~---~-~~~~~~~~~~~~~----------~~~~  222 (266)
                      .+...|+.+|.+.+.+++.++.+   .|++++.|.||.+.+|......   . -..+........+          ...+
T Consensus       135 ~p~~~Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  211 (310)
T 1eq2_A          135 KPLNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDF  211 (310)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCE
T ss_pred             CCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEcc
Confidence            23568999999999999998765   4799999999999988653210   0 0111111111111          1122


Q ss_pred             CCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCCc
Q 024517          223 LDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       223 ~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      ... +|+|+++..++....    |+.+.+.+|..++..++
T Consensus       212 i~v-~Dva~~~~~~~~~~~----~~~~~i~~~~~~s~~e~  246 (310)
T 1eq2_A          212 VYV-GDVADVNLWFLENGV----SGIFNLGTGRAESFQAV  246 (310)
T ss_dssp             EEH-HHHHHHHHHHHHHCC----CEEEEESCSCCBCHHHH
T ss_pred             EEH-HHHHHHHHHHHhcCC----CCeEEEeCCCccCHHHH
Confidence            334 499999999987542    88999988876654443

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.80  E-value=6.7e-20  Score=153.52  Aligned_cols=200  Identities=17%  Similarity=0.141  Sum_probs=144.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      ++|||||+|+||++++++|+++|++|++++|.                       .+|++|.+  ++.+++++.     +
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~~--~~~~~~~~~-----~   56 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNIS--QVQQVVQEI-----R   56 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCHH--HHHHHHHHH-----C
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCHH--HHHHHHHhc-----C
Confidence            89999999999999999999999999999851                       16999988  888888764     6


Q ss_pred             CCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---------CCC
Q 024517           87 LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---------LYP  157 (266)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~~~  157 (266)
                      +|++||+|+....     ....++++..+++|+.++..+++++.+.      +.++|++||.......         +..
T Consensus        57 ~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~v~~SS~~vy~~~~~~~~~E~~~~~  125 (287)
T 3sc6_A           57 PHIIIHCAAYTKV-----DQAEKERDLAYVINAIGARNVAVASQLV------GAKLVYISTDYVFQGDRPEGYDEFHNPA  125 (287)
T ss_dssp             CSEEEECCCCCCH-----HHHTTCHHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGSCCCCSSCBCTTSCCC
T ss_pred             CCEEEECCcccCh-----HHHhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEchhhhcCCCCCCCCCCCCCCC
Confidence            9999999987421     1112457889999999999999998553      3589999997653221         122


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCC-------CCCCChhhHH
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH-------RWLDVKNDLA  230 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~dva  230 (266)
                      +...|+.+|.+.+.+++.++.       +.+.+.|+.+.+|......  ..+........+..       .+..+ +|+|
T Consensus       126 p~~~Y~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v-~Dva  195 (287)
T 3sc6_A          126 PINIYGASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNFV--KTMIRLGKEREEISVVADQIGSPTYV-ADLN  195 (287)
T ss_dssp             CCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHH--HHHHHHHTTCSEEEEECSCEECCEEH-HHHH
T ss_pred             CCCHHHHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcHH--HHHHHHHHcCCCeEeecCcccCceEH-HHHH
Confidence            457899999999999987643       4588999999887543221  12222222222211       12224 4999


Q ss_pred             HHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          231 STVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      +++.+++....    ++.+++.+|..++..+
T Consensus       196 ~~~~~~~~~~~----~~~~~i~~~~~~s~~e  222 (287)
T 3sc6_A          196 VMINKLIHTSL----YGTYHVSNTGSCSWFE  222 (287)
T ss_dssp             HHHHHHHTSCC----CEEEECCCBSCEEHHH
T ss_pred             HHHHHHHhCCC----CCeEEEcCCCcccHHH
Confidence            99999997643    6689998887665443

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.80  E-value=4.2e-19  Score=159.19  Aligned_cols=230  Identities=16%  Similarity=0.120  Sum_probs=152.6

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHc---CCeEEEEecccccHHHHHHHhcccCC-------------CCCeEEEEEecC
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKR---GCRLVLVGNERRLSSVAEKMMGSLKG-------------GQPVEVVGLDME   66 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~---g~~v~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~   66 (266)
                      .++|+||||||+|+||++++++|+++   |++|++++|.+...+..+++.+.+..             ..++.++.+|++
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~  150 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS  150 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence            46899999999999999999999999   89999999655444444444433322             258999999999


Q ss_pred             CCc----hHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeE
Q 024517           67 EDR----EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSI  142 (266)
Q Consensus        67 ~~~----~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~i  142 (266)
                      +++    .+++.++++       ++|+|||+|+....         ++++..+++|+.++..+++.+..    .+ .+++
T Consensus       151 ~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~---------~~~~~~~~~Nv~gt~~ll~aa~~----~~-~~~~  209 (478)
T 4dqv_A          151 EPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA---------FPYHELFGPNVAGTAELIRIALT----TK-LKPF  209 (478)
T ss_dssp             SGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB---------SSCCEEHHHHHHHHHHHHHHHTS----SS-CCCE
T ss_pred             CcccCCCHHHHHHHHc-------CCCEEEECccccCC---------cCHHHHHHHHHHHHHHHHHHHHh----CC-CCeE
Confidence            542    114454443       58999999987432         22346788999999999888743    22 3689


Q ss_pred             EEEecccccccCC---C-----------------CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCc-c
Q 024517          143 VFLTSIIGAERGL---Y-----------------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY-P  201 (266)
Q Consensus       143 v~iss~~~~~~~~---~-----------------~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~-~  201 (266)
                      |++||........   +                 .....|+.+|.+.+.+++.++.+.   |++++.|.||.|.++.. .
T Consensus       210 V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~~~~~  286 (478)
T 4dqv_A          210 TYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILADTSYA  286 (478)
T ss_dssp             EEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECCSSSS
T ss_pred             EEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCCCccC
Confidence            9999965422110   0                 001349999999999999998864   79999999999987632 1


Q ss_pred             cccc-cHH---HHHHH--hhccCCC-------------C-CCCChhhHHHHHHHHccCC--CCcccccEEEEcCCcc
Q 024517          202 IAVG-QER---AVKLV--REAAPLH-------------R-WLDVKNDLASTVIYLISDG--SRYMTGTTIYVDGAQS  256 (266)
Q Consensus       202 ~~~~-~~~---~~~~~--~~~~~~~-------------~-~~~~~~dva~~~~~l~s~~--~~~~~G~~i~~dgG~~  256 (266)
                      .... ...   +....  ....|..             + -..+.+|+|+++..++...  .....|+.+.+.++..
T Consensus       287 g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~  363 (478)
T 4dqv_A          287 GQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHD  363 (478)
T ss_dssp             SCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCC
T ss_pred             CcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCC
Confidence            1101 111   11111  1122211             0 1123359999999987531  1235678899877654

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.79  E-value=2.2e-19  Score=149.12  Aligned_cols=200  Identities=20%  Similarity=0.165  Sum_probs=137.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      ++|||||+|+||++++++|+ +|++|+++++....+        .     .   +.+|+++.+  ++.++++..     +
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~--------~-----~---~~~Dl~~~~--~~~~~~~~~-----~   57 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ--------G-----G---YKLDLTDFP--RLEDFIIKK-----R   57 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT--------T-----C---EECCTTSHH--HHHHHHHHH-----C
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC--------C-----C---ceeccCCHH--HHHHHHHhc-----C
Confidence            59999999999999999999 489999998544321        1     1   789999988  888888764     6


Q ss_pred             CCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC--------CCC
Q 024517           87 LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL--------YPG  158 (266)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~--------~~~  158 (266)
                      +|++|||||....     ..+.++++..+++|+.++..+++++.+    .  ++++|++||.....+..        ..+
T Consensus        58 ~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~iv~~SS~~~~~~~~~~~~e~~~~~~  126 (273)
T 2ggs_A           58 PDVIINAAAMTDV-----DKCEIEKEKAYKINAEAVRHIVRAGKV----I--DSYIVHISTDYVFDGEKGNYKEEDIPNP  126 (273)
T ss_dssp             CSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEEEEGGGSCSSSCSBCTTSCCCC
T ss_pred             CCEEEECCcccCh-----hhhhhCHHHHHHHhHHHHHHHHHHHHH----h--CCeEEEEecceeEcCCCCCcCCCCCCCC
Confidence            9999999987321     123467899999999999999999864    2  36999999987653321        113


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccC------CCCCCCChhhHHHH
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAP------LHRWLDVKNDLAST  232 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~  232 (266)
                      ...|+.+|.+.+.+++.    +....+|++.|. |  .+++.      ...........+      ..++..++ |+|++
T Consensus       127 ~~~Y~~sK~~~e~~~~~----~~~~~iR~~~v~-G--~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~  192 (273)
T 2ggs_A          127 INYYGLSKLLGETFALQ----DDSLIIRTSGIF-R--NKGFP------IYVYKTLKEGKTVFAFKGYYSPISAR-KLASA  192 (273)
T ss_dssp             SSHHHHHHHHHHHHHCC----TTCEEEEECCCB-S--SSSHH------HHHHHHHHTTCCEEEESCEECCCBHH-HHHHH
T ss_pred             CCHHHHHHHHHHHHHhC----CCeEEEeccccc-c--ccHHH------HHHHHHHHcCCCEEeecCCCCceEHH-HHHHH
Confidence            57899999999999987    222234444444 3  12111      111111111111      22455565 99999


Q ss_pred             HHHHccCCCCcccccEEEEcCCccccCC
Q 024517          233 VIYLISDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       233 ~~~l~s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                      +.++++...   +| .+.+++ ..++..
T Consensus       193 i~~~~~~~~---~g-~~~i~~-~~~s~~  215 (273)
T 2ggs_A          193 ILELLELRK---TG-IIHVAG-ERISRF  215 (273)
T ss_dssp             HHHHHHHTC---CE-EEECCC-CCEEHH
T ss_pred             HHHHHhcCc---CC-eEEECC-CcccHH
Confidence            999997542   45 788877 555543

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.79  E-value=4e-19  Score=151.04  Aligned_cols=215  Identities=13%  Similarity=0.116  Sum_probs=149.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      .++++|||||+|+||++++++|+++|++|+++++..                      .+|+++.+  ++.+++++.   
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~--~~~~~~~~~---   54 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSR--AVHDFFASE---   54 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHH--HHHHHHHHH---
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHH--HHHHHHHhc---
Confidence            468999999999999999999999999999877421                      16999887  888877653   


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---------
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---------  154 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------  154 (266)
                        ++|+|||+|+....    .....++.+..+++|+.++..+++++.+.    + .+++|++||.......         
T Consensus        55 --~~d~vih~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~vyg~~~~~~~~E~~  123 (321)
T 1e6u_A           55 --RIDQVYLAAAKVGG----IVANNTYPADFIYQNMMIESNIIHAAHQN----D-VNKLLFLGSSCIYPKLAKQPMAESE  123 (321)
T ss_dssp             --CCSEEEECCCCCCC----HHHHHHCHHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEECCGGGSCTTCCSSBCGGG
T ss_pred             --CCCEEEEcCeecCC----cchhhhCHHHHHHHHHHHHHHHHHHHHHh----C-CCeEEEEccHHHcCCCCCCCcCccc
Confidence              69999999986311    01123456788999999999999888652    2 3699999997653210         


Q ss_pred             ----C-CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----cHHHHHHHhh-------ccC
Q 024517          155 ----L-YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKLVRE-------AAP  218 (266)
Q Consensus       155 ----~-~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~-------~~~  218 (266)
                          . .+....|+.+|.+.+.+++.++.++   +++++.|.||.+.+|.......    -..+......       ..+
T Consensus       124 ~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  200 (321)
T 1e6u_A          124 LLQGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVV  200 (321)
T ss_dssp             TTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEE
T ss_pred             cccCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceE
Confidence                0 1113589999999999999998774   7999999999999876542100    0112222111       111


Q ss_pred             ---CC----CCCCChhhHHHHHHHHccCCCCc------ccccEEEEcCCccccCC
Q 024517          219 ---LH----RWLDVKNDLASTVIYLISDGSRY------MTGTTIYVDGAQSITRP  260 (266)
Q Consensus       219 ---~~----~~~~~~~dva~~~~~l~s~~~~~------~~G~~i~~dgG~~~~~~  260 (266)
                         .+    .+... +|+|+++..++......      ..|+.+++.+|..++..
T Consensus       201 ~~~~g~~~~~~i~v-~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  254 (321)
T 1e6u_A          201 VWGSGTPMREFLHV-DDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIR  254 (321)
T ss_dssp             EESCSCCEECEEEH-HHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHH
T ss_pred             EcCCCCEEEEeEEH-HHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHH
Confidence               00    12233 49999999998653211      24788999777655543

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.78  E-value=1.1e-17  Score=141.93  Aligned_cols=212  Identities=16%  Similarity=0.151  Sum_probs=145.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHc--CCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKR--GCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~--g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ++|||||+|+||++++++|+++  |++|++++ +....+              .+.++.+|++|.+  ++.+++++    
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--------------~~~~~~~D~~d~~--~~~~~~~~----   60 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG--------------GIKFITLDVSNRD--EIDRAVEK----   60 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT--------------TCCEEECCTTCHH--HHHHHHHH----
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc--------------CceEEEecCCCHH--HHHHHHhh----
Confidence            4899999999999999999999  89999988 433221              3457889999988  88887764    


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC--------
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL--------  155 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~--------  155 (266)
                       .++|+|||+|+....      ...++++..+++|+.++..+++++.+.    + .+++|++||........        
T Consensus        61 -~~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~e~  128 (317)
T 3ajr_A           61 -YSIDAIFHLAGILSA------KGEKDPALAYKVNMNGTYNILEAAKQH----R-VEKVVIPSTIGVFGPETPKNKVPSI  128 (317)
T ss_dssp             -TTCCEEEECCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEEEEGGGCCTTSCSSSBCSS
T ss_pred             -cCCcEEEECCcccCC------ccccChHHHhhhhhHHHHHHHHHHHHc----C-CCEEEEecCHHHhCCCCCCCCcccc
Confidence             279999999986311      123567889999999999999988642    2 36999999986643210        


Q ss_pred             --CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-----cHHHHHHHhhcc---CCC-----
Q 024517          156 --YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-----QERAVKLVREAA---PLH-----  220 (266)
Q Consensus       156 --~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-----~~~~~~~~~~~~---~~~-----  220 (266)
                        ..+...|+.+|.+.+.+++.++.++   |++++.+.|+.+..+.......     ...+........   +..     
T Consensus       129 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (317)
T 3ajr_A          129 TITRPRTMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRAL  205 (317)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCE
T ss_pred             ccCCCCchHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCcccee
Confidence              1146789999999999999988763   7999999876665543211000     011111111110   000     


Q ss_pred             CCCCChhhHHHHHHHHccCCCC-cccccEEEEcCC
Q 024517          221 RWLDVKNDLASTVIYLISDGSR-YMTGTTIYVDGA  254 (266)
Q Consensus       221 ~~~~~~~dva~~~~~l~s~~~~-~~~G~~i~~dgG  254 (266)
                      .+... +|++++++.++..... ..+|+.+++.|+
T Consensus       206 ~~i~v-~Dva~a~~~~l~~~~~~~~~g~~~~i~~~  239 (317)
T 3ajr_A          206 PMMYM-PDALKALVDLYEADRDKLVLRNGYNVTAY  239 (317)
T ss_dssp             EEEEH-HHHHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred             eeeEH-HHHHHHHHHHHhCCccccccCceEecCCc
Confidence            01223 4999999988865432 345788998753

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.77  E-value=1.1e-18  Score=157.75  Aligned_cols=226  Identities=11%  Similarity=0.008  Sum_probs=153.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccH----HHHHHHhccc------CCCCCeEEEEEecCCCchHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLS----SVAEKMMGSL------KGGQPVEVVGLDMEEDREGAFD   74 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~----~~~~~~~~~~------~~~~~~~~~~~D~~~~~~~~v~   74 (266)
                      .++||||||+|+||++++++|.++|++|++++|.....    .+.+.+...+      ....++.++.+|+++.+  ++.
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~--~l~  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD--DVV  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCS--SCC
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccc--cCC
Confidence            47899999999999999999999999999998443322    2222221110      00258999999999977  555


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc--cc
Q 024517           75 EAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG--AE  152 (266)
Q Consensus        75 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~--~~  152 (266)
                              ...++|+|||+|+...        ...+++..+++|+.++..+++.+.+     . ..++|++||...  ..
T Consensus       228 --------~~~~~D~Vih~Aa~~~--------~~~~~~~~~~~Nv~gt~~ll~~a~~-----~-~~~~v~iSS~~vG~~~  285 (508)
T 4f6l_B          228 --------LPENMDTIIHAGARTD--------HFGDDDEFEKVNVQGTVDVIRLAQQ-----H-HARLIYVSTISVGTYF  285 (508)
T ss_dssp             --------CSSCCSEEEECCCC----------------CCHHHHHHHHHHHHHHHHT-----T-TCEEEEEEESCTTSEE
T ss_pred             --------CccCCCEEEECCceec--------CCCCHHHHhhhHHHHHHHHHHHHHh-----C-CCcEEEeCChhhccCC
Confidence                    3468999999998732        1235677888999999999998865     2 479999999876  00


Q ss_pred             c---------C-----CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----cHHHHHHHh
Q 024517          153 R---------G-----LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKLVR  214 (266)
Q Consensus       153 ~---------~-----~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~  214 (266)
                      .         .     .......|+.+|.+.+.+++.++.    .|++++.+.||.|.++.......    ...+.....
T Consensus       286 ~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~  361 (508)
T 4f6l_B          286 DIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMN  361 (508)
T ss_dssp             CTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHH
T ss_pred             ccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHH
Confidence            0         0     012467899999999999998754    58999999999999876543211    111222222


Q ss_pred             hccCCCCC----------CCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          215 EAAPLHRW----------LDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       215 ~~~~~~~~----------~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      .....+.+          ..+.+|+|+++++++....   .|+.+.+.+|..++-.+
T Consensus       362 ~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~~s~~e  415 (508)
T 4f6l_B          362 DLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKMPVKS  415 (508)
T ss_dssp             HHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSCEEEHHH
T ss_pred             HHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCCCCCHHH
Confidence            21111111          1223599999999997643   78999999887665443

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.77  E-value=1.4e-19  Score=152.42  Aligned_cols=207  Identities=13%  Similarity=0.037  Sum_probs=144.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      ++|||||+|+||++++++|+ +|++|++++|...                   ++.+|++|.+  ++.++++..     +
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------------~~~~D~~d~~--~~~~~~~~~-----~   54 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------------EFCGDFSNPK--GVAETVRKL-----R   54 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------------SSCCCTTCHH--HHHHHHHHH-----C
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------------cccccCCCHH--HHHHHHHhc-----C
Confidence            69999999999999999999 8999999984331                   2357999988  888877653     6


Q ss_pred             CCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---------CCC
Q 024517           87 LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---------LYP  157 (266)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~~~  157 (266)
                      +|++||+|+.....     ...++++..+++|+.++..+++++.+    .  +.++|++||.......         +..
T Consensus        55 ~d~vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~----~--~~~~v~~SS~~vy~~~~~~~~~E~~~~~  123 (299)
T 1n2s_A           55 PDVIVNAAAHTAVD-----KAESEPELAQLLNATSVEAIAKAANE----T--GAWVVHYSTDYVFPGTGDIPWQETDATS  123 (299)
T ss_dssp             CSEEEECCCCCCHH-----HHTTCHHHHHHHHTHHHHHHHHHHTT----T--TCEEEEEEEGGGSCCCTTCCBCTTSCCC
T ss_pred             CCEEEECcccCCHh-----hhhcCHHHHHHHHHHHHHHHHHHHHH----c--CCcEEEEecccEEeCCCCCCCCCCCCCC
Confidence            99999999863210     11245678899999999999998843    2  3489999997653221         012


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCC-------CCCChhhHH
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHR-------WLDVKNDLA  230 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~dva  230 (266)
                      +...|+.+|.+.+.+++.++.       +++.+.||.+.++......  ..+........+...       +..+ +|+|
T Consensus       124 p~~~Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v-~Dva  193 (299)
T 1n2s_A          124 PLNVYGKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNNFA--KTMLRLAKERQTLSVINDQYGAPTGA-ELLA  193 (299)
T ss_dssp             CSSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHH--HHHHHHHHHCSEEEEECSCEECCEEH-HHHH
T ss_pred             CccHHHHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCcHH--HHHHHHHhcCCCEEeecCcccCCeeH-HHHH
Confidence            356899999999999987632       7899999999987643211  122222222222111       2224 4999


Q ss_pred             HHHHHHccCCCCcc-cccEEEEcCCccccCCC
Q 024517          231 STVIYLISDGSRYM-TGTTIYVDGAQSITRPR  261 (266)
Q Consensus       231 ~~~~~l~s~~~~~~-~G~~i~~dgG~~~~~~~  261 (266)
                      +++..++....... .|+.+.+.+|..++..+
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e  225 (299)
T 1n2s_A          194 DCTAHAIRVALNKPEVAGLYHLVAGGTTTWHD  225 (299)
T ss_dssp             HHHHHHHHHHHHCGGGCEEEECCCBSCEEHHH
T ss_pred             HHHHHHHHHhccccccCceEEEeCCCCCCHHH
Confidence            99999986532123 58899998887665443

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.77  E-value=2.1e-19  Score=152.62  Aligned_cols=220  Identities=12%  Similarity=0.052  Sum_probs=138.8

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEeccccc-HHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRL-SSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +.++++|||||+|+||++++++|+++|++|++++|.... ....+.+..... ..++.++.+|++               
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~---------------   68 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLE-KPVLELEERDLS---------------   68 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEEC-SCGGGCCHHHHT---------------
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhcc-CCCeeEEeCccc---------------
Confidence            568999999999999999999999999999999843321 000000000000 011222222222               


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-------
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-------  154 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-------  154 (266)
                          ++|++||+|+...... ..    ++....++ |+.++..+++++.+.    + -+++|++||.......       
T Consensus        69 ----~~d~vi~~a~~~~~~~-~~----~~~~~~~~-n~~~~~~ll~a~~~~----~-v~~~v~~SS~~v~~~~~~~~~~E  133 (321)
T 3vps_A           69 ----DVRLVYHLASHKSVPR-SF----KQPLDYLD-NVDSGRHLLALCTSV----G-VPKVVVGSTCEVYGQADTLPTPE  133 (321)
T ss_dssp             ----TEEEEEECCCCCCHHH-HT----TSTTTTHH-HHHHHHHHHHHHHHH----T-CCEEEEEEEGGGGCSCSSSSBCT
T ss_pred             ----cCCEEEECCccCChHH-HH----hCHHHHHH-HHHHHHHHHHHHHHc----C-CCeEEEecCHHHhCCCCCCCCCC
Confidence                7999999998742110 01    11123455 889999888888554    2 3699999997653221       


Q ss_pred             --CCCCchhhHHhHHHHHHHHHHHHHHhCCCCc-EEEEEecCcccCCCcccccccHHHHHHHhhccCCC---------CC
Q 024517          155 --LYPGAAAYGACAASIHQLVRTAAMEIGKHKI-RVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH---------RW  222 (266)
Q Consensus       155 --~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~  222 (266)
                        +..+...|+.+|.+.+.+++.++.+   .++ +++.+.|+.+.+|..........+........+..         .+
T Consensus       134 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (321)
T 3vps_A          134 DSPLSPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDF  210 (321)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECE
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEce
Confidence              1224578999999999999999876   578 99999999999876543111122222222221111         12


Q ss_pred             CCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          223 LDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       223 ~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      ... +|+|+++..++.....   | .+++.+|..++..+
T Consensus       211 v~v-~Dva~~~~~~~~~~~~---g-~~~i~~~~~~s~~e  244 (321)
T 3vps_A          211 TYI-TDVVDKLVALANRPLP---S-VVNFGSGQSLSVND  244 (321)
T ss_dssp             EEH-HHHHHHHHHGGGSCCC---S-EEEESCSCCEEHHH
T ss_pred             EEH-HHHHHHHHHHHhcCCC---C-eEEecCCCcccHHH
Confidence            234 4999999999986543   7 99999887665443

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.77  E-value=3.7e-19  Score=150.51  Aligned_cols=220  Identities=12%  Similarity=0.017  Sum_probs=148.4

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++++++|||||+|+||++++++|+++|+     . ..          ..   ...+.++.+|++|.+  ++.++++.. 
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-----~-~~----------~~---~~~~~~~~~D~~d~~--~~~~~~~~~-   60 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG-----L-PG----------ED---WVFVSSKDADLTDTA--QTRALFEKV-   60 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC-----C-TT----------CE---EEECCTTTCCTTSHH--HHHHHHHHS-
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC-----c-cc----------cc---ccccCceecccCCHH--HHHHHHhhc-
Confidence            46789999999999999999999999997     1 00          00   012334468999988  888777652 


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc--------
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER--------  153 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~--------  153 (266)
                          ++|+|||+|+....    .....++.+..+++|+.++..+++++...    + -+++|++||......        
T Consensus        61 ----~~d~Vih~A~~~~~----~~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~-~~~~v~~SS~~vyg~~~~~~~~E  127 (319)
T 4b8w_A           61 ----QPTHVIHLAAMVGG----LFRNIKYNLDFWRKNVHMNDNVLHSAFEV----G-ARKVVSCLSTCIFPDKTTYPIDE  127 (319)
T ss_dssp             ----CCSEEEECCCCCCC----HHHHTTCHHHHHHHHHHHHHHHHHHHHHT----T-CSEEEEECCGGGSCSSCCSSBCG
T ss_pred             ----CCCEEEECceeccc----ccccccCHHHHHHHHHHHHHHHHHHHHHc----C-CCeEEEEcchhhcCCCCCCCccc
Confidence                69999999987321    01122345678999999999999887543    2 358999999854321        


Q ss_pred             ------CCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----cHHHHHH----HhhccCC
Q 024517          154 ------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKL----VREAAPL  219 (266)
Q Consensus       154 ------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~----~~~~~~~  219 (266)
                            ...+....|+.+|.+.+.+++.++++.   +++++.+.|+.+.+|.......    -..+...    .....+.
T Consensus       128 ~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (319)
T 4b8w_A          128 TMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSAL  204 (319)
T ss_dssp             GGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCE
T ss_pred             cccccCCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCce
Confidence                  111233369999999999999998874   7999999999999876532111    0112222    2222221


Q ss_pred             CC---------CCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          220 HR---------WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       220 ~~---------~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      ..         +... +|+|+++..++.... ...|+.+++.+|..++..+
T Consensus       205 ~~~~~g~~~~~~i~v-~Dva~a~~~~~~~~~-~~~~~~~ni~~~~~~s~~e  253 (319)
T 4b8w_A          205 TVWGTGNPRRQFIYS-LDLAQLFIWVLREYN-EVEPIILSVGEEDEVSIKE  253 (319)
T ss_dssp             EEESCSCCEECEEEH-HHHHHHHHHHHHHCC-CSSCEEECCCGGGCEEHHH
T ss_pred             EEeCCCCeeEEEEeH-HHHHHHHHHHHhccc-cCCceEEEecCCCceeHHH
Confidence            11         1233 599999999986532 3567788887776665443

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.77  E-value=1.7e-18  Score=144.90  Aligned_cols=202  Identities=13%  Similarity=0.087  Sum_probs=140.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHc--CCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKR--GCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~--g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      |++|||||+|+||++++++|+++  |++|++++ +.++.+++.    .     .++.++.+|++|.+  ++.++++    
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~-----~~~~~~~~D~~d~~--~l~~~~~----   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D-----QGVEVRHGDYNQPE--SLQKAFA----   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H-----TTCEEEECCTTCHH--HHHHHTT----
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h-----cCCeEEEeccCCHH--HHHHHHh----
Confidence            46999999999999999999999  99999998 444443321    1     36788999999987  7776653    


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhh
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY  162 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y  162 (266)
                         ++|++||+|+. ..       . +      ++|+.++..+++++..    .+ -+++|++||.... .    ....|
T Consensus        66 ---~~d~vi~~a~~-~~-------~-~------~~n~~~~~~l~~a~~~----~~-~~~~v~~Ss~~~~-~----~~~~y  117 (287)
T 2jl1_A           66 ---GVSKLLFISGP-HY-------D-N------TLLIVQHANVVKAARD----AG-VKHIAYTGYAFAE-E----SIIPL  117 (287)
T ss_dssp             ---TCSEEEECCCC-CS-------C-H------HHHHHHHHHHHHHHHH----TT-CSEEEEEEETTGG-G----CCSTH
T ss_pred             ---cCCEEEEcCCC-Cc-------C-c------hHHHHHHHHHHHHHHH----cC-CCEEEEECCCCCC-C----CCCch
Confidence               58999999985 11       1 1      4677888887777743    22 3699999998653 2    12479


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCC----CCCCCChhhHHHHHHHHcc
Q 024517          163 GACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPL----HRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva~~~~~l~s  238 (266)
                      +.+|.+.+.+++.       .|++++.+.||.+.++......  ...........+.    ..+..++ |+|+++..++.
T Consensus       118 ~~~K~~~E~~~~~-------~~~~~~ilrp~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~-Dva~~~~~~~~  187 (287)
T 2jl1_A          118 AHVHLATEYAIRT-------TNIPYTFLRNALYTDFFVNEGL--RASTESGAIVTNAGSGIVNSVTRN-ELALAAATVLT  187 (287)
T ss_dssp             HHHHHHHHHHHHH-------TTCCEEEEEECCBHHHHSSGGG--HHHHHHTEEEESCTTCCBCCBCHH-HHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHH-------cCCCeEEEECCEeccccchhhH--HHHhhCCceeccCCCCccCccCHH-HHHHHHHHHhc
Confidence            9999999988853       5799999999998765422211  1111110001111    1344455 99999999997


Q ss_pred             CCCCcccccEEEEcCCccccCCCc
Q 024517          239 DGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      ..  ...|+.+.+++|..++..++
T Consensus       188 ~~--~~~g~~~~i~~~~~~s~~e~  209 (287)
T 2jl1_A          188 EE--GHENKTYNLVSNQPWTFDEL  209 (287)
T ss_dssp             SS--SCTTEEEEECCSSCBCHHHH
T ss_pred             CC--CCCCcEEEecCCCcCCHHHH
Confidence            53  24789999998876654443

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.76  E-value=1.2e-17  Score=156.47  Aligned_cols=179  Identities=12%  Similarity=0.121  Sum_probs=129.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |.+++|++|||||+|+||++++++|+++|++|++++ +.....+..+.+....  ..++.++.+|+++.+  ++.+++++
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~v~~v~~Dl~d~~--~l~~~~~~   82 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT--KHHIPFYEVDLCDRK--GLEKVFKE   82 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH--TSCCCEEECCTTCHH--HHHHHHHH
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc--CCceEEEEcCCCCHH--HHHHHHHh
Confidence            456789999999999999999999999999999998 4433333333332111  246788999999988  88877764


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-----
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-----  154 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-----  154 (266)
                      .     ++|+|||+|+.... .    ...++.+..+++|+.++..+++++..    .+ .++||++||.......     
T Consensus        83 ~-----~~D~Vih~A~~~~~-~----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~~~iV~~SS~~vyg~~~~~~~  147 (699)
T 1z45_A           83 Y-----KIDSVIHFAGLKAV-G----ESTQIPLRYYHNNILGTVVLLELMQQ----YN-VSKFVFSSSATVYGDATRFPN  147 (699)
T ss_dssp             S-----CCCEEEECCSCCCH-H----HHHHSHHHHHHHHHHHHHHHHHHHHH----HT-CCEEEEEEEGGGGCCGGGSTT
T ss_pred             C-----CCCEEEECCcccCc-C----ccccCHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEECcHHHhCCCccccc
Confidence            2     79999999986321 1    11233467889999999999876643    22 4799999997643210     


Q ss_pred             --------CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCC
Q 024517          155 --------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDE  199 (266)
Q Consensus       155 --------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~  199 (266)
                              +..+...|+.+|.+.+.+++.++.++ ..++++..+.|+.+..+.
T Consensus       148 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~~  199 (699)
T 1z45_A          148 MIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAH  199 (699)
T ss_dssp             CCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCC
T ss_pred             cCCccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCCC
Confidence                    01235689999999999999998875 357999999998887653

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.75  E-value=2.3e-19  Score=150.32  Aligned_cols=206  Identities=13%  Similarity=0.075  Sum_probs=142.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +++++|||| +|+||++++++|+++|++|++++|....      +      ..++.++.+|++|.+  ++.++++     
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~------~------~~~~~~~~~Dl~d~~--~~~~~~~-----   61 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQP------M------PAGVQTLIADVTRPD--TLASIVH-----   61 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSC------C------CTTCCEEECCTTCGG--GCTTGGG-----
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccc------c------ccCCceEEccCCChH--HHHHhhc-----
Confidence            467899999 5999999999999999999999843221      0      147788999999988  7776664     


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---------
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---------  154 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------  154 (266)
                       +++|++||+|+..          ..+.+..+++|+.++..+++++.    +.+ .+++|++||.......         
T Consensus        62 -~~~d~vih~a~~~----------~~~~~~~~~~n~~~~~~ll~a~~----~~~-~~~~v~~SS~~vyg~~~~~~~~E~~  125 (286)
T 3gpi_A           62 -LRPEILVYCVAAS----------EYSDEHYRLSYVEGLRNTLSALE----GAP-LQHVFFVSSTGVYGQEVEEWLDEDT  125 (286)
T ss_dssp             -GCCSEEEECHHHH----------HHC-----CCSHHHHHHHHHHTT----TSC-CCEEEEEEEGGGCCCCCSSEECTTS
T ss_pred             -CCCCEEEEeCCCC----------CCCHHHHHHHHHHHHHHHHHHHh----hCC-CCEEEEEcccEEEcCCCCCCCCCCC
Confidence             3699999999852          13457788999999988888774    222 4799999997543211         


Q ss_pred             CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhc-c-CC----CCCCCChhh
Q 024517          155 LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA-A-PL----HRWLDVKND  228 (266)
Q Consensus       155 ~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-~-~~----~~~~~~~~d  228 (266)
                      +..+...|+.+|.+.+.+ +..        ++++.+.|+.+.++....      +...+... . ..    ..+... +|
T Consensus       126 ~~~p~~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~------~~~~~~~~~~~~~~~~~~~~i~v-~D  189 (286)
T 3gpi_A          126 PPIAKDFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLR------MIRQAQTPEQWPARNAWTNRIHR-DD  189 (286)
T ss_dssp             CCCCCSHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCH------HHHHTTCGGGSCSSBCEECEEEH-HH
T ss_pred             CCCCCChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchh------HHHHHHhcccCCCcCceeEEEEH-HH
Confidence            122467899999999888 542        789999999998876432      11111110 0 00    112233 49


Q ss_pred             HHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          229 LASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       229 va~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      +|+++..++........|+.+.+.+|..++..+
T Consensus       190 va~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~e  222 (286)
T 3gpi_A          190 GAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHD  222 (286)
T ss_dssp             HHHHHHHHHHHHTTSCCCSEEEECCSCCEEHHH
T ss_pred             HHHHHHHHHhhhccCCCCceEEEeCCCCCCHHH
Confidence            999999998753234678999998887665443

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.74  E-value=4.7e-18  Score=142.05  Aligned_cols=197  Identities=13%  Similarity=0.111  Sum_probs=132.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHc--CCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKR--GCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~--g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ++|||||+|+||++++++|+++  |++|++++ +.++.+++.    .     ..+.++.+|++|.+  ++.++++     
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~-----~~~~~~~~D~~d~~--~~~~~~~-----   64 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A-----QGITVRQADYGDEA--ALTSALQ-----   64 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H-----TTCEEEECCTTCHH--HHHHHTT-----
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c-----CCCeEEEcCCCCHH--HHHHHHh-----
Confidence            4899999999999999999999  99999998 544443322    1     35788999999987  7776653     


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhH
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG  163 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~  163 (266)
                        ++|++||+|+.. .                ..|+.++..+++++..    .+ -+++|++||.... .    ....|+
T Consensus        65 --~~d~vi~~a~~~-~----------------~~~~~~~~~l~~a~~~----~~-~~~~v~~Ss~~~~-~----~~~~y~  115 (286)
T 2zcu_A           65 --GVEKLLLISSSE-V----------------GQRAPQHRNVINAAKA----AG-VKFIAYTSLLHAD-T----SPLGLA  115 (286)
T ss_dssp             --TCSEEEECC-------------------------CHHHHHHHHHHH----HT-CCEEEEEEETTTT-T----CCSTTH
T ss_pred             --CCCEEEEeCCCC-c----------------hHHHHHHHHHHHHHHH----cC-CCEEEEECCCCCC-C----CcchhH
Confidence              689999999851 1                0255666666655533    33 4699999997653 2    224799


Q ss_pred             HhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccC----CCCCCCChhhHHHHHHHHccC
Q 024517          164 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAP----LHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~s~  239 (266)
                      .+|.+.+.+++.       .+++++.|.||.+.++.....   ...........+    ...+..++ |+|+++..+++.
T Consensus       116 ~sK~~~e~~~~~-------~~~~~~ilrp~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~-Dva~~~~~~~~~  184 (286)
T 2zcu_A          116 DEHIETEKMLAD-------SGIVYTLLRNGWYSENYLASA---PAALEHGVFIGAAGDGKIASATRA-DYAAAAARVISE  184 (286)
T ss_dssp             HHHHHHHHHHHH-------HCSEEEEEEECCBHHHHHTTH---HHHHHHTEEEESCTTCCBCCBCHH-HHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHH-------cCCCeEEEeChHHhhhhHHHh---HHhhcCCceeccCCCCccccccHH-HHHHHHHHHhcC
Confidence            999999998863       479999999998866532111   111111000111    12234455 999999999976


Q ss_pred             CCCcccccEEEEcCCccccCCC
Q 024517          240 GSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      ..  .+|+.+.++|+..++..+
T Consensus       185 ~~--~~g~~~~i~~~~~~s~~e  204 (286)
T 2zcu_A          185 AG--HEGKVYELAGDSAWTLTQ  204 (286)
T ss_dssp             SS--CTTCEEEECCSSCBCHHH
T ss_pred             CC--CCCceEEEeCCCcCCHHH
Confidence            32  489999999886665443

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.73  E-value=2.4e-17  Score=138.83  Aligned_cols=212  Identities=16%  Similarity=0.072  Sum_probs=135.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcC-CeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRG-CRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      .|++|||||+|+||++++++|+++| ++|++++|...... .+.+..     ..+.++.+|++|++  ++.++++     
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~-~~~l~~-----~~~~~~~~D~~d~~--~l~~~~~-----   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKA-AKELRL-----QGAEVVQGDQDDQV--IMELALN-----   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHH-HHHHHH-----TTCEEEECCTTCHH--HHHHHHT-----
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHH-HHHHHH-----CCCEEEEecCCCHH--HHHHHHh-----
Confidence            6899999999999999999999999 99999984332221 122221     36788999999988  7777664     


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-CCCCchhh
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-LYPGAAAY  162 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-~~~~~~~y  162 (266)
                        ++|++||+++.....      .       .+.|+.    ..+.+++.+++.+ -++||++|+. +..+. .......|
T Consensus        72 --~~d~vi~~a~~~~~~------~-------~~~~~~----~~~~~~~aa~~~g-v~~iv~~S~~-~~~~~~~~~~~~~y  130 (299)
T 2wm3_A           72 --GAYATFIVTNYWESC------S-------QEQEVK----QGKLLADLARRLG-LHYVVYSGLE-NIKKLTAGRLAAAH  130 (299)
T ss_dssp             --TCSEEEECCCHHHHT------C-------HHHHHH----HHHHHHHHHHHHT-CSEEEECCCC-CHHHHTTTSCCCHH
T ss_pred             --cCCEEEEeCCCCccc------c-------chHHHH----HHHHHHHHHHHcC-CCEEEEEcCc-cccccCCCcccCch
Confidence              589999999752110      0       122333    4455555555544 4789996654 32221 01224679


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccH-HHHHHHhhccCCC----CCCCChhhHHHHHHHHc
Q 024517          163 GACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE-RAVKLVREAAPLH----RWLDVKNDLASTVIYLI  237 (266)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~dva~~~~~l~  237 (266)
                      ..+|.+++.+++.       .|++++.|.||++.++......... .......-..|.+    .+..++ |+|+.+..++
T Consensus       131 ~~sK~~~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~-Dva~~~~~~l  202 (299)
T 2wm3_A          131 FDGKGEVEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVS-DLGPVVLSLL  202 (299)
T ss_dssp             HHHHHHHHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGG-GHHHHHHHHH
T ss_pred             hhHHHHHHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHH-HHHHHHHHHH
Confidence            9999999988764       3799999999999887543211100 0000000011211    234555 9999999998


Q ss_pred             cCCCCcccccEEEEcCCccccCC
Q 024517          238 SDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       238 s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                      ... ....|+.+.++| ..++-.
T Consensus       203 ~~~-~~~~g~~~~~~g-~~~s~~  223 (299)
T 2wm3_A          203 KMP-EKYVGQNIGLST-CRHTAE  223 (299)
T ss_dssp             HSH-HHHTTCEEECCS-EEECHH
T ss_pred             cCh-hhhCCeEEEeee-ccCCHH
Confidence            753 224788999875 445443

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.70  E-value=5.8e-17  Score=135.75  Aligned_cols=200  Identities=14%  Similarity=0.135  Sum_probs=127.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHc-CCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            7 RVLLTSDGDEISKNIAFHLAKR-GCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~-g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      ++|||||+|+||++++++|.++ |++|++++ +.++..+    +.     ..++.++.+|++|++  ++.++++      
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~----~~-----~~~v~~~~~D~~d~~--~l~~~~~------   64 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD----DW-----RGKVSVRQLDYFNQE--SMVEAFK------   64 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG----GG-----BTTBEEEECCTTCHH--HHHHHTT------
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH----hh-----hCCCEEEEcCCCCHH--HHHHHHh------
Confidence            4999999999999999999998 99999998 4443322    11     147899999999988  7776663      


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHH
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA  164 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~  164 (266)
                       ++|++||+++....        .       ..|+.+    .+.+++.+++.+ -++||++||.......      .|..
T Consensus        65 -~~d~vi~~a~~~~~--------~-------~~~~~~----~~~l~~aa~~~g-v~~iv~~Ss~~~~~~~------~~~~  117 (289)
T 3e48_A           65 -GMDTVVFIPSIIHP--------S-------FKRIPE----VENLVYAAKQSG-VAHIIFIGYYADQHNN------PFHM  117 (289)
T ss_dssp             -TCSEEEECCCCCCS--------H-------HHHHHH----HHHHHHHHHHTT-CCEEEEEEESCCSTTC------CSTT
T ss_pred             -CCCEEEEeCCCCcc--------c-------hhhHHH----HHHHHHHHHHcC-CCEEEEEcccCCCCCC------CCcc
Confidence             68999999986311        1       113333    345555555544 4799999996543221      1222


Q ss_pred             hHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCC----CCCChhhHHHHHHHHccCC
Q 024517          165 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHR----WLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~dva~~~~~l~s~~  240 (266)
                      ++...     .+...+...|++++.|.||++.+++....   ...........|.+.    +..++ |+|+.+..+++..
T Consensus       118 ~~~~~-----~~e~~~~~~g~~~~ilrp~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~i~~~-Dva~~~~~~l~~~  188 (289)
T 3e48_A          118 SPYFG-----YASRLLSTSGIDYTYVRMAMYMDPLKPYL---PELMNMHKLIYPAGDGRINYITRN-DIARGVIAIIKNP  188 (289)
T ss_dssp             HHHHH-----HHHHHHHHHCCEEEEEEECEESTTHHHHH---HHHHHHTEECCCCTTCEEEEECHH-HHHHHHHHHHHCG
T ss_pred             chhHH-----HHHHHHHHcCCCEEEEeccccccccHHHH---HHHHHCCCEecCCCCceeeeEEHH-HHHHHHHHHHcCC
Confidence            22211     12222334589999999999988753211   111111111222222    34455 9999999999765


Q ss_pred             CCcccccEEEEcCCccccCCCc
Q 024517          241 SRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      ...  |+.+.++ |..++-.++
T Consensus       189 ~~~--g~~~~~~-~~~~s~~e~  207 (289)
T 3e48_A          189 DTW--GKRYLLS-GYSYDMKEL  207 (289)
T ss_dssp             GGT--TCEEEEC-CEEEEHHHH
T ss_pred             CcC--CceEEeC-CCcCCHHHH
Confidence            433  9999998 877665443

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.70  E-value=1e-16  Score=138.18  Aligned_cols=210  Identities=13%  Similarity=0.082  Sum_probs=132.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEe-cCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLD-MEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~v~~~~~~   79 (266)
                      |++++++++||||+|+||++++++|+++|++|++++|...... .+.+...    .++.++.+| ++|.+  ++.++++ 
T Consensus         1 M~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~~~l~~~----~~v~~v~~D~l~d~~--~l~~~~~-   72 (352)
T 1xgk_A            1 MAQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI-AEELQAI----PNVTLFQGPLLNNVP--LMDTLFE-   72 (352)
T ss_dssp             --CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH-HHHHHTS----TTEEEEESCCTTCHH--HHHHHHT-
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh-HHHHhhc----CCcEEEECCccCCHH--HHHHHHh-
Confidence            6777889999999999999999999999999999884332221 1233221    368889999 99988  7777663 


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc-ccccCCCCC
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII-GAERGLYPG  158 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~-~~~~~~~~~  158 (266)
                            .+|++|||++...       .         +.|..+     +.+++.+.+.+.-+++|++||.. +..+  .+.
T Consensus        73 ------~~d~Vi~~a~~~~-------~---------~~~~~~-----~~l~~aa~~~g~v~~~V~~SS~~~~~~~--~~~  123 (352)
T 1xgk_A           73 ------GAHLAFINTTSQA-------G---------DEIAIG-----KDLADAAKRAGTIQHYIYSSMPDHSLYG--PWP  123 (352)
T ss_dssp             ------TCSEEEECCCSTT-------S---------CHHHHH-----HHHHHHHHHHSCCSEEEEEECCCGGGTS--SCC
T ss_pred             ------cCCEEEEcCCCCC-------c---------HHHHHH-----HHHHHHHHHcCCccEEEEeCCccccccC--CCC
Confidence                  5899999987521       0         113222     44444444432126999999986 3333  234


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccc---cccH-HHHHHHhhccCC---CC--CCCChhhH
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA---VGQE-RAVKLVREAAPL---HR--WLDVKNDL  229 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~---~~~~-~~~~~~~~~~~~---~~--~~~~~~dv  229 (266)
                      ...|+.+|.+.+.+++..       +++++.|.||.+.+......   .... .......-..+.   .+  +..+.+|+
T Consensus       124 ~~~y~~sK~~~E~~~~~~-------gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dv  196 (352)
T 1xgk_A          124 AVPMWAPKFTVENYVRQL-------GLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDV  196 (352)
T ss_dssp             CCTTTHHHHHHHHHHHTS-------SSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHH
T ss_pred             CccHHHHHHHHHHHHHHc-------CCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHH
Confidence            467999999999988752       79999999997654332110   0000 000000000011   11  23331499


Q ss_pred             HHHHHHHccCCCCcccccEEEEcCC
Q 024517          230 ASTVIYLISDGSRYMTGTTIYVDGA  254 (266)
Q Consensus       230 a~~~~~l~s~~~~~~~G~~i~~dgG  254 (266)
                      |+++..++........|+.+.+.++
T Consensus       197 a~ai~~~l~~~~~~~~g~~~~l~~~  221 (352)
T 1xgk_A          197 GPALLQIFKDGPQKWNGHRIALTFE  221 (352)
T ss_dssp             HHHHHHHHHHCHHHHTTCEEEECSE
T ss_pred             HHHHHHHHhCCchhhCCeEEEEecC
Confidence            9999999975433457899999754

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.66  E-value=9.5e-16  Score=128.09  Aligned_cols=201  Identities=11%  Similarity=0.091  Sum_probs=130.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      .+++||||+ |.||++++++|+++|++|++++| .++...+    ..     ..+.++.+|+++.+              
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-----~~~~~~~~D~~d~~--------------   60 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAI----RA-----SGAEPLLWPGEEPS--------------   60 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHH----HH-----TTEEEEESSSSCCC--------------
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhH----hh-----CCCeEEEecccccc--------------
Confidence            368999998 99999999999999999999994 4333222    11     36889999998832              


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhc--cCCCCeEEEEecccccccC-------
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE--SKAGGSIVFLTSIIGAERG-------  154 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~g~iv~iss~~~~~~~-------  154 (266)
                      +.++|++||+|+.....      .  .              ..+.++..+.+  .+ -+++|++||.......       
T Consensus        61 ~~~~d~vi~~a~~~~~~------~--~--------------~~~~l~~a~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~E  117 (286)
T 3ius_A           61 LDGVTHLLISTAPDSGG------D--P--------------VLAALGDQIAARAAQ-FRWVGYLSTTAVYGDHDGAWVDE  117 (286)
T ss_dssp             CTTCCEEEECCCCBTTB------C--H--------------HHHHHHHHHHHTGGG-CSEEEEEEEGGGGCCCTTCEECT
T ss_pred             cCCCCEEEECCCccccc------c--H--------------HHHHHHHHHHhhcCC-ceEEEEeecceecCCCCCCCcCC
Confidence            35799999999863221      0  0              01334444443  22 4799999997543211       


Q ss_pred             --CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHH-HHHhhccCCCCCCCChhhHHH
Q 024517          155 --LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV-KLVREAAPLHRWLDVKNDLAS  231 (266)
Q Consensus       155 --~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~dva~  231 (266)
                        +..+...|+.+|.+.+.+++.+      .+++++.+.|+.+.++.......-.... ...........+...+ |+|+
T Consensus       118 ~~~~~p~~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~-Dva~  190 (286)
T 3ius_A          118 TTPLTPTAARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVE-DIAQ  190 (286)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHH-HHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHH-HHHH
Confidence              1123457999999999998776      5799999999999887533211000000 0000000011122334 9999


Q ss_pred             HHHHHccCCCCcccccEEEEcCCccccCCCc
Q 024517          232 TVIYLISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       232 ~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      ++..++....   .|+.+++.+|..++..++
T Consensus       191 a~~~~~~~~~---~g~~~~i~~~~~~s~~e~  218 (286)
T 3ius_A          191 VLAASMARPD---PGAVYNVCDDEPVPPQDV  218 (286)
T ss_dssp             HHHHHHHSCC---TTCEEEECCSCCBCHHHH
T ss_pred             HHHHHHhCCC---CCCEEEEeCCCCccHHHH
Confidence            9999997653   788999988876654443

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.65  E-value=2.3e-16  Score=136.72  Aligned_cols=196  Identities=14%  Similarity=0.091  Sum_probs=138.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      ++|||||+|+||++++++|+++|+ +|+.+++.                           ++.+  ++.++++       
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~--~l~~~~~-------   45 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEE--ELESALL-------   45 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHH--HHHHHHH-------
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHH--HHHHHhc-------
Confidence            699999999999999999999998 77765521                           5555  7777765       


Q ss_pred             CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHHh
Q 024517           86 NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGAC  165 (266)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~s  165 (266)
                      ++|++||+|+....         ++.+..+++|+.++..+++++.    +.+...++|++||.....      ...|+.+
T Consensus        46 ~~d~Vih~a~~~~~---------~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~~v~~Ss~~~~~------~~~Y~~s  106 (369)
T 3st7_A           46 KADFIVHLAGVNRP---------EHDKEFSLGNVSYLDHVLDILT----RNTKKPAILLSSSIQATQ------DNPYGES  106 (369)
T ss_dssp             HCSEEEECCCSBCT---------TCSTTCSSSCCBHHHHHHHHHT----TCSSCCEEEEEEEGGGGS------CSHHHHH
T ss_pred             cCCEEEECCcCCCC---------CCHHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEeCchhhcC------CCCchHH
Confidence            48999999987432         1234467889999998888773    333124899999976532      4689999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--cHHHHHHHhhccCCCC--------CCCChhhHHHHHHH
Q 024517          166 AASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKLVREAAPLHR--------WLDVKNDLASTVIY  235 (266)
Q Consensus       166 K~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~--------~~~~~~dva~~~~~  235 (266)
                      |.+.+.+++.++++.   ++++..+.|+.+.++.......  -..+........+...        +... +|+|+++..
T Consensus       107 K~~~E~~~~~~~~~~---g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v-~Dva~~~~~  182 (369)
T 3st7_A          107 KLQGEQLLREYAEEY---GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYV-DDIVAEIKR  182 (369)
T ss_dssp             HHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEH-HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh---CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEH-HHHHHHHHH
Confidence            999999999998874   6899999999998876543211  1222222222222221        1223 599999999


Q ss_pred             HccCCCCcccccEEEEcCCccccCCCc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      ++.... ...|+.+.+.+|..++..++
T Consensus       183 ~l~~~~-~~~~~~~~i~~~~~~s~~e~  208 (369)
T 3st7_A          183 AIEGTP-TIENGVPTVPNVFKVTLGEI  208 (369)
T ss_dssp             HHHTCC-CEETTEECCSCCEEEEHHHH
T ss_pred             HHhCCc-ccCCceEEeCCCCceeHHHH
Confidence            997643 22488899988866654443

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.65  E-value=2.2e-16  Score=133.19  Aligned_cols=204  Identities=12%  Similarity=0.115  Sum_probs=125.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEeccc--------ccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNER--------RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEA   76 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~   76 (266)
                      +++++||||+|+||++++++|+++|++|++++|..        +.+. .+.+..     ..+.++.+|++|.+  ++.++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~l~~-----~~v~~v~~D~~d~~--~l~~~   73 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEEL-IDNYQS-----LGVILLEGDINDHE--TLVKA   73 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHH-HHHHHH-----TTCEEEECCTTCHH--HHHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHH-HHHHHh-----CCCEEEEeCCCCHH--HHHHH
Confidence            56899999999999999999999999999988443        1111 122221     36789999999987  77776


Q ss_pred             HHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC--
Q 024517           77 VDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG--  154 (266)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~--  154 (266)
                      ++       ++|++||+++...                    +.+...+++++    ++.+.-+++|  .|..+....  
T Consensus        74 ~~-------~~d~vi~~a~~~~--------------------~~~~~~l~~aa----~~~g~v~~~v--~S~~g~~~~~~  120 (307)
T 2gas_A           74 IK-------QVDIVICAAGRLL--------------------IEDQVKIIKAI----KEAGNVKKFF--PSEFGLDVDRH  120 (307)
T ss_dssp             HT-------TCSEEEECSSSSC--------------------GGGHHHHHHHH----HHHCCCSEEE--CSCCSSCTTSC
T ss_pred             Hh-------CCCEEEECCcccc--------------------cccHHHHHHHH----HhcCCceEEe--ecccccCcccc
Confidence            64       5999999998631                    22334444443    3322124665  344442110  


Q ss_pred             --CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccH---HHHHHH---hhccCCCCCCCCh
Q 024517          155 --LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE---RAVKLV---REAAPLHRWLDVK  226 (266)
Q Consensus       155 --~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~  226 (266)
                        ..+....| .+|.+++.+++.       .+++++.|.||++.+.+........   ......   ........+..++
T Consensus       121 ~~~~p~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  192 (307)
T 2gas_A          121 DAVEPVRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEA  192 (307)
T ss_dssp             CCCTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHH
T ss_pred             cCCCcchhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHH
Confidence              12335678 999999887753       3689999999999886543211100   000000   0000011234444


Q ss_pred             hhHHHHHHHHccCCCCcccccEEEEcC-CccccCC
Q 024517          227 NDLASTVIYLISDGSRYMTGTTIYVDG-AQSITRP  260 (266)
Q Consensus       227 ~dva~~~~~l~s~~~~~~~G~~i~~dg-G~~~~~~  260 (266)
                       |+|+.+..++....  ..|+.+.+.| |..++-.
T Consensus       193 -Dva~~~~~~l~~~~--~~~~~~~~~~~~~~~s~~  224 (307)
T 2gas_A          193 -DVGTFTIRAANDPN--TLNKAVHIRLPKNYLTQN  224 (307)
T ss_dssp             -HHHHHHHHHHTCGG--GTTEEEECCCGGGEEEHH
T ss_pred             -HHHHHHHHHHcCcc--ccCceEEEeCCCCcCCHH
Confidence             99999999997532  3477777765 3445443

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.64  E-value=6.1e-16  Score=132.94  Aligned_cols=214  Identities=12%  Similarity=0.050  Sum_probs=134.1

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEeccc-ccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNER-RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      |+.+++|||||+|+||++++++|+++|++|++++|.. ...+..+.+....  ..++.++.+|++|.+  ++.+++++. 
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~--~~~v~~~~~Dl~d~~--~l~~~~~~~-   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE--DKGAIIVYGLINEQE--AMEKILKEH-   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH--HTTCEEEECCTTCHH--HHHHHHHHT-
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH--hCCcEEEEeecCCHH--HHHHHHhhC-
Confidence            3467899999999999999999999999999998443 2222222221111  147899999999988  888887652 


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccc---cCCCCC
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAE---RGLYPG  158 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~---~~~~~~  158 (266)
                          ++|+|||+++.                    .|+.++..+++++...    +.-.++++ |+ .+..   ..+.+.
T Consensus        83 ----~~d~Vi~~a~~--------------------~n~~~~~~l~~aa~~~----g~v~~~v~-S~-~g~~~~e~~~~~p  132 (346)
T 3i6i_A           83 ----EIDIVVSTVGG--------------------ESILDQIALVKAMKAV----GTIKRFLP-SE-FGHDVNRADPVEP  132 (346)
T ss_dssp             ----TCCEEEECCCG--------------------GGGGGHHHHHHHHHHH----CCCSEEEC-SC-CSSCTTTCCCCTT
T ss_pred             ----CCCEEEECCch--------------------hhHHHHHHHHHHHHHc----CCceEEee-cc-cCCCCCccCcCCC
Confidence                69999999976                    1777777777776543    10135554 43 3321   111245


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHH-HH-----HhhccCCCCCCCChhhHHHH
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV-KL-----VREAAPLHRWLDVKNDLAST  232 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~dva~~  232 (266)
                      ...|+.+|.+.+.+.+.       .|+++..|.||.+.+............. ..     .........+... +|+|+.
T Consensus       133 ~~~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~-~Dva~~  204 (346)
T 3i6i_A          133 GLNMYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAG-TDIGKF  204 (346)
T ss_dssp             HHHHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECH-HHHHHH
T ss_pred             cchHHHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCH-HHHHHH
Confidence            67899999998887764       4799999999998875533221100000 00     0000001123344 499999


Q ss_pred             HHHHccCCCCcccccEEEEcC-CccccCCC
Q 024517          233 VIYLISDGSRYMTGTTIYVDG-AQSITRPR  261 (266)
Q Consensus       233 ~~~l~s~~~~~~~G~~i~~dg-G~~~~~~~  261 (266)
                      +..++...  ...|+.+.+-| |..++-.+
T Consensus       205 ~~~~l~~~--~~~~~~~~i~g~~~~~s~~e  232 (346)
T 3i6i_A          205 TMKTVDDV--RTLNKSVHFRPSCNCLNINE  232 (346)
T ss_dssp             HHHHTTCG--GGTTEEEECCCGGGEECHHH
T ss_pred             HHHHHhCc--cccCeEEEEeCCCCCCCHHH
Confidence            99999754  23466676653 45554433

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.61  E-value=3.1e-15  Score=129.10  Aligned_cols=218  Identities=11%  Similarity=0.051  Sum_probs=140.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcC-----CeEEEEec-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRG-----CRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g-----~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      ++++|||||+|+||++++++|+++|     ++|++++| .....     .     ...++.++.+|++|.+  ++.++++
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~-----~~~~~~~~~~Dl~d~~--~~~~~~~   68 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----H-----EDNPINYVQCDISDPD--DSQAKLS   68 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----C-----CSSCCEEEECCTTSHH--HHHHHHT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----c-----ccCceEEEEeecCCHH--HHHHHHh
Confidence            5789999999999999999999999     99999984 33322     1     1247889999999987  7776664


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEE-------EEeccccc
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIV-------FLTSIIGA  151 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv-------~iss~~~~  151 (266)
                      ..    +++|++||+|+.. .         .+.+..+++|+.++..+++++.+....   -.++|       ++||....
T Consensus        69 ~~----~~~d~vih~a~~~-~---------~~~~~~~~~n~~~~~~l~~a~~~~~~~---~~~~v~~~g~~i~~Ss~~vy  131 (364)
T 2v6g_A           69 PL----TDVTHVFYVTWAN-R---------STEQENCEANSKMFRNVLDAVIPNCPN---LKHISLQTGRKHYMGPFESY  131 (364)
T ss_dssp             TC----TTCCEEEECCCCC-C---------SSHHHHHHHHHHHHHHHHHHHTTTCTT---CCEEEEECCTHHHHCCGGGT
T ss_pred             cC----CCCCEEEECCCCC-c---------chHHHHHHHhHHHHHHHHHHHHHhccc---cceEEeccCceEEEechhhc
Confidence            32    2499999999863 1         235778899999999999988664211   24665       67876432


Q ss_pred             ccC------------CCCCchhhHHhHHHHHHHHHHHHHHhCCCC-cEEEEEecCcccCCCcccccc--cHH-HHHHH--
Q 024517          152 ERG------------LYPGAAAYGACAASIHQLVRTAAMEIGKHK-IRVNGIARGLHLQDEYPIAVG--QER-AVKLV--  213 (266)
Q Consensus       152 ~~~------------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~-i~v~~v~pG~v~t~~~~~~~~--~~~-~~~~~--  213 (266)
                      ...            ..+....|.    +.+.+++.++.   ..+ +++..+.|+.+..+.......  ... .....  
T Consensus       132 g~~~~~~~~~~E~~~~~~~~~~y~----~~E~~~~~~~~---~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~  204 (364)
T 2v6g_A          132 GKIESHDPPYTEDLPRLKYMNFYY----DLEDIMLEEVE---KKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICK  204 (364)
T ss_dssp             TTSCCCCSSBCTTSCCCSSCCHHH----HHHHHHHHHHT---TSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHH
T ss_pred             cccccCCCCCCccccCCccchhhH----HHHHHHHHHhh---cCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHH
Confidence            110            011133452    34455544432   245 999999999999876542111  011 11222  


Q ss_pred             hhccCCC---------CCCCC--hhhHHHHHHHHccCCCCcccccEEEEcCCccccCC
Q 024517          214 REAAPLH---------RWLDV--KNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       214 ~~~~~~~---------~~~~~--~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                      ....+..         .+...  .+|+|++++.++...  ...|+.+++.++..++..
T Consensus       205 ~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~--~~~g~~~ni~~~~~~s~~  260 (364)
T 2v6g_A          205 HEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDP--YAKNEAFNVSNGDVFKWK  260 (364)
T ss_dssp             HHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCG--GGTTEEEEECCSCCBCHH
T ss_pred             hcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCC--CCCCceEEecCCCcCCHH
Confidence            1122211         11222  148999999998643  247899999888655543

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.57  E-value=5.5e-16  Score=131.70  Aligned_cols=205  Identities=10%  Similarity=0.089  Sum_probs=123.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEeccc-c-----cHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNER-R-----LSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      .++++||||+|+||++++++|+++|++|++++|.. .     ..+..+.+..     ..+.++.+|++|.+  ++.++++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~-----~~v~~v~~D~~d~~--~l~~a~~   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS-----MGVTIIEGEMEEHE--KMVSVLK   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH-----TTCEEEECCTTCHH--HHHHHHT
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc-----CCcEEEEecCCCHH--HHHHHHc
Confidence            46799999999999999999999999999988443 1     1111122221     46889999999987  7777764


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-CC-
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-LY-  156 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-~~-  156 (266)
                             .+|++||+++...                    +.+...+++++    .+.+.-+++|  .|..+.... .. 
T Consensus        77 -------~~d~vi~~a~~~~--------------------~~~~~~l~~aa----~~~g~v~~~v--~S~~g~~~~~~~~  123 (321)
T 3c1o_A           77 -------QVDIVISALPFPM--------------------ISSQIHIINAI----KAAGNIKRFL--PSDFGCEEDRIKP  123 (321)
T ss_dssp             -------TCSEEEECCCGGG--------------------SGGGHHHHHHH----HHHCCCCEEE--CSCCSSCGGGCCC
T ss_pred             -------CCCEEEECCCccc--------------------hhhHHHHHHHH----HHhCCccEEe--ccccccCcccccc
Confidence                   5899999998621                    23344444444    3322014665  344332110 01 


Q ss_pred             --CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc------cHHHHHHHhhccCCCCCCCChhh
Q 024517          157 --PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG------QERAVKLVREAAPLHRWLDVKND  228 (266)
Q Consensus       157 --~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~d  228 (266)
                        +....| .+|.+++.+++.       .+++++.|.||.+.+........      ................+..++ |
T Consensus       124 ~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-D  194 (321)
T 3c1o_A          124 LPPFESVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEE-D  194 (321)
T ss_dssp             CHHHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHH-H
T ss_pred             CCCcchHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHH-H
Confidence              124578 999999888763       26888889999886542211000      000000000000011233444 9


Q ss_pred             HHHHHHHHccCCCCcccccEEEEcC-CccccCC
Q 024517          229 LASTVIYLISDGSRYMTGTTIYVDG-AQSITRP  260 (266)
Q Consensus       229 va~~~~~l~s~~~~~~~G~~i~~dg-G~~~~~~  260 (266)
                      +|+.+..++....  ..|+.+.+.| |..++-.
T Consensus       195 va~~~~~~l~~~~--~~g~~~~~~g~~~~~t~~  225 (321)
T 3c1o_A          195 IAKYTIKVACDPR--CCNRIVIYRPPKNIISQN  225 (321)
T ss_dssp             HHHHHHHHHHCGG--GTTEEEECCCGGGEEEHH
T ss_pred             HHHHHHHHHhCcc--ccCeEEEEeCCCCcccHH
Confidence            9999999997542  3478788865 4555443

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.56  E-value=2.7e-15  Score=126.86  Aligned_cols=212  Identities=13%  Similarity=0.170  Sum_probs=127.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEeccccc--HHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRL--SSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .++++||||+|+||++++++|+++|++|++++|....  .+..+.+....  ...+.++.+|++|++  ++.++++    
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~--~l~~~~~----   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQ--RLVDALK----   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHH--HHHHHHT----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHH--hCCeEEEeCCCCCHH--HHHHHHh----
Confidence            5689999999999999999999999999998844211  11112221110  146889999999988  7777664    


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC-----CC
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL-----YP  157 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~-----~~  157 (266)
                         ++|++||+++.....                .|+.+...+++++    ++.+.-+++|+  |..+.....     .+
T Consensus        76 ---~~d~vi~~a~~~~~~----------------~~~~~~~~l~~aa----~~~g~v~~~v~--S~~g~~~~~~~~~~~p  130 (313)
T 1qyd_A           76 ---QVDVVISALAGGVLS----------------HHILEQLKLVEAI----KEAGNIKRFLP--SEFGMDPDIMEHALQP  130 (313)
T ss_dssp             ---TCSEEEECCCCSSSS----------------TTTTTHHHHHHHH----HHSCCCSEEEC--SCCSSCTTSCCCCCSS
T ss_pred             ---CCCEEEECCccccch----------------hhHHHHHHHHHHH----HhcCCCceEEe--cCCcCCccccccCCCC
Confidence               599999999863221                1555655555554    33221246764  433321110     13


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCC-------CCCCCChhhHH
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPL-------HRWLDVKNDLA  230 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva  230 (266)
                      ....| .+|.+++.+.+.       .|++++.|.||++.+....................+.       ..+..+ +|+|
T Consensus       131 ~~~~y-~sK~~~e~~~~~-------~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~-~Dva  201 (313)
T 1qyd_A          131 GSITF-IDKRKVRRAIEA-------ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDE-DDVG  201 (313)
T ss_dssp             TTHHH-HHHHHHHHHHHH-------TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECH-HHHH
T ss_pred             CcchH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEH-HHHH
Confidence            35678 999998887752       4788899999988654322111000000000000000       112334 4999


Q ss_pred             HHHHHHccCCCCcccccEEEEcC-CccccCC
Q 024517          231 STVIYLISDGSRYMTGTTIYVDG-AQSITRP  260 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dg-G~~~~~~  260 (266)
                      +.+..++....  ..|+.+.+.| |..++-.
T Consensus       202 ~~~~~~l~~~~--~~~~~~~~~g~~~~~s~~  230 (313)
T 1qyd_A          202 TYTIKSIDDPQ--TLNKTMYIRPPMNILSQK  230 (313)
T ss_dssp             HHHHHHTTCGG--GSSSEEECCCGGGEEEHH
T ss_pred             HHHHHHHhCcc--cCCceEEEeCCCCccCHH
Confidence            99999997532  3467777765 3445433

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.55  E-value=6.1e-14  Score=126.83  Aligned_cols=211  Identities=13%  Similarity=0.147  Sum_probs=135.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      +++||||||+|.||++++++|+++|++|++++|.....                ..+.+|+.+..    .+       .+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~----------------~~v~~d~~~~~----~~-------~l  199 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP----------------GKRFWDPLNPA----SD-------LL  199 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT----------------TCEECCTTSCC----TT-------TT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc----------------cceeecccchh----HH-------hc
Confidence            57899999999999999999999999999998433211                12556776533    11       22


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---------C
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---------L  155 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~  155 (266)
                      .++|+|||+|+.... .   ..+.++.+..+++|+.++..+++++..   +.+ .+++|++||.......         .
T Consensus       200 ~~~D~Vih~A~~~~~-~---~~~~~~~~~~~~~Nv~gt~~ll~a~a~---~~~-~~r~V~~SS~~vyg~~~~~~~~~E~~  271 (516)
T 3oh8_A          200 DGADVLVHLAGEPIF-G---RFNDSHKEAIRESRVLPTKFLAELVAE---STQ-CTTMISASAVGFYGHDRGDEILTEES  271 (516)
T ss_dssp             TTCSEEEECCCC---------CCGGGHHHHHHHTHHHHHHHHHHHHH---CSS-CCEEEEEEEGGGGCSEEEEEEECTTS
T ss_pred             CCCCEEEECCCCccc-c---ccchhHHHHHHHHHHHHHHHHHHHHHh---cCC-CCEEEEeCcceEecCCCCCCccCCCC
Confidence            579999999987321 1   345566788999999999999997532   222 4699999996543200         0


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhcc--CCC------CCCCChh
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAA--PLH------RWLDVKN  227 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~  227 (266)
                      ..+...|+.+|...+.+.+.+    ...|++++.|.||.+.++....   -..+........  ..+      .+... +
T Consensus       272 ~~~~~~y~~~~~~~E~~~~~~----~~~gi~~~ilRp~~v~Gp~~~~---~~~~~~~~~~g~~~~~g~g~~~~~~i~v-~  343 (516)
T 3oh8_A          272 ESGDDFLAEVCRDWEHATAPA----SDAGKRVAFIRTGVALSGRGGM---LPLLKTLFSTGLGGKFGDGTSWFSWIAI-D  343 (516)
T ss_dssp             CCCSSHHHHHHHHHHHTTHHH----HHTTCEEEEEEECEEEBTTBSH---HHHHHHTTC---CCCCTTSCCEECEEEH-H
T ss_pred             CCCcChHHHHHHHHHHHHHHH----HhCCCCEEEEEeeEEECCCCCh---HHHHHHHHHhCCCcccCCCCceEceEeH-H
Confidence            124557888888877665433    2358999999999998875211   111111111100  111      12223 4


Q ss_pred             hHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          228 DLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       228 dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      |+|+++..++....  ..| .+++.++..++..+
T Consensus       344 Dva~ai~~~l~~~~--~~g-~~ni~~~~~~s~~e  374 (516)
T 3oh8_A          344 DLTDIYYRAIVDAQ--ISG-PINAVAPNPVSNAD  374 (516)
T ss_dssp             HHHHHHHHHHHCTT--CCE-EEEESCSCCEEHHH
T ss_pred             HHHHHHHHHHhCcc--cCC-cEEEECCCCCCHHH
Confidence            99999999997543  344 56776666555433

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.53  E-value=2.9e-15  Score=126.36  Aligned_cols=208  Identities=15%  Similarity=0.163  Sum_probs=122.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccc-c--HHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERR-L--SSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .++++||||+|+||++++++|+++|++|++++|... .  .+..+.+....  ...+.++.+|++|.+  ++.++++   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~--~l~~~~~---   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHA--SLVEAVK---   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHH--HHHHHHH---
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH--hCCCEEEEeccCCHH--HHHHHHc---
Confidence            578999999999999999999999999999884321 1  22222221111  146889999999988  8777764   


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC----CCC
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG----LYP  157 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~----~~~  157 (266)
                          ++|++||+++...                    +.+...+++++    ++.+.-+++|+ |+ .+....    ..+
T Consensus        77 ----~~d~vi~~a~~~~--------------------~~~~~~l~~aa----~~~g~v~~~v~-S~-~g~~~~~~~~~~p  126 (308)
T 1qyc_A           77 ----NVDVVISTVGSLQ--------------------IESQVNIIKAI----KEVGTVKRFFP-SE-FGNDVDNVHAVEP  126 (308)
T ss_dssp             ----TCSEEEECCCGGG--------------------SGGGHHHHHHH----HHHCCCSEEEC-SC-CSSCTTSCCCCTT
T ss_pred             ----CCCEEEECCcchh--------------------hhhHHHHHHHH----HhcCCCceEee-cc-cccCccccccCCc
Confidence                5899999998621                    23334444444    33321246653 43 332111    012


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccH-HH--HHH---HhhccCCCCCCCChhhHHH
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE-RA--VKL---VREAAPLHRWLDVKNDLAS  231 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~-~~--~~~---~~~~~~~~~~~~~~~dva~  231 (266)
                      ....| .+|.+++.+.+.       .+++++.|.||.+.+.......... ..  ...   .........+..+ +|+++
T Consensus       127 ~~~~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~Dva~  197 (308)
T 1qyc_A          127 AKSVF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKE-EDIGT  197 (308)
T ss_dssp             HHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECH-HHHHH
T ss_pred             chhHH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecH-HHHHH
Confidence            24578 999998887753       3688888999988654322110000 00  000   0000000112333 49999


Q ss_pred             HHHHHccCCCCcccccEEEEcC-CccccCC
Q 024517          232 TVIYLISDGSRYMTGTTIYVDG-AQSITRP  260 (266)
Q Consensus       232 ~~~~l~s~~~~~~~G~~i~~dg-G~~~~~~  260 (266)
                      .+..++...  ...|+.+.+.| |..++-.
T Consensus       198 ~~~~~l~~~--~~~~~~~~~~g~~~~~s~~  225 (308)
T 1qyc_A          198 FTIKAVDDP--RTLNKTLYLRLPANTLSLN  225 (308)
T ss_dssp             HHHTTSSCG--GGTTEEEECCCGGGEEEHH
T ss_pred             HHHHHHhCc--cccCeEEEEeCCCCccCHH
Confidence            999998753  23467777765 3445443

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.53  E-value=6.1e-15  Score=125.15  Aligned_cols=205  Identities=10%  Similarity=0.071  Sum_probs=121.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEeccc-ccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNER-RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      +++|||||+|+||++++++|+++|++|++++|.. ...+..+.+..     ..+.++.+|++|.+  ++.++++      
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~-----~~v~~v~~Dl~d~~--~l~~a~~------   78 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS-----LGAIIVKGELDEHE--KLVELMK------   78 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH-----TTCEEEECCTTCHH--HHHHHHT------
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc-----CCCEEEEecCCCHH--HHHHHHc------
Confidence            5799999999999999999999999999988443 23332233322     36789999999988  7777764      


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC-C---CCch
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL-Y---PGAA  160 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~-~---~~~~  160 (266)
                       ++|++||+++...                    +.+...    +++.+++.+.-+++|+  |..+..... .   +...
T Consensus        79 -~~d~vi~~a~~~~--------------------~~~~~~----l~~aa~~~g~v~~~v~--S~~g~~~~~~~~~~p~~~  131 (318)
T 2r6j_A           79 -KVDVVISALAFPQ--------------------ILDQFK----ILEAIKVAGNIKRFLP--SDFGVEEDRINALPPFEA  131 (318)
T ss_dssp             -TCSEEEECCCGGG--------------------STTHHH----HHHHHHHHCCCCEEEC--SCCSSCTTTCCCCHHHHH
T ss_pred             -CCCEEEECCchhh--------------------hHHHHH----HHHHHHhcCCCCEEEe--eccccCcccccCCCCcch
Confidence             5899999998621                    223333    3344343321246653  433321110 1   1234


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHH---HhhccCCCCCCCChhhHHHHHHHHc
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL---VREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      .| .+|.+++.+.+.       .++++..|.||.+.................   .........+..++ |+++.+..++
T Consensus       132 ~y-~sK~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-Dva~~~~~~l  202 (318)
T 2r6j_A          132 LI-ERKRMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQ-DIGLYTIKVA  202 (318)
T ss_dssp             HH-HHHHHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHH-HHHHHHHHHT
T ss_pred             hH-HHHHHHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHH-HHHHHHHHHh
Confidence            68 999998887753       468888999998754321110000000000   00000001123444 9999999999


Q ss_pred             cCCCCcccccEEEEcC-CccccCCC
Q 024517          238 SDGSRYMTGTTIYVDG-AQSITRPR  261 (266)
Q Consensus       238 s~~~~~~~G~~i~~dg-G~~~~~~~  261 (266)
                      ....  ..|+.+.+.| |..++-.+
T Consensus       203 ~~~~--~~~~~~~~~g~~~~~s~~e  225 (318)
T 2r6j_A          203 TDPR--ALNRVVIYRPSTNIITQLE  225 (318)
T ss_dssp             TCGG--GTTEEEECCCGGGEEEHHH
T ss_pred             cCcc--ccCeEEEecCCCCccCHHH
Confidence            7532  2367777754 44554433

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.36  E-value=1.9e-11  Score=102.59  Aligned_cols=208  Identities=14%  Similarity=0.083  Sum_probs=124.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      +||||||+|.||++++++|.++|++|+++.|....              .++   ..     +  ...      .+.+..
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~--------------~~~---~~-----~--~~~------~~~l~~   51 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP--------------GRI---TW-----D--ELA------ASGLPS   51 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT--------------TEE---EH-----H--HHH------HHCCCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc--------------Cee---ec-----c--hhh------HhhccC
Confidence            49999999999999999999999999998843210              111   11     1  110      123467


Q ss_pred             CCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---------CCC
Q 024517           87 LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---------LYP  157 (266)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~~~  157 (266)
                      +|.+||.|+. ....+....+.+..+..++.|+.++-.+.+.+...-.  + ...+|+.||.......         +..
T Consensus        52 ~d~vihla~~-~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~--~-~~~~i~~Ss~~vyg~~~~~~~~E~~p~~  127 (298)
T 4b4o_A           52 CDAAVNLAGE-NILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQ--P-PKAWVLVTGVAYYQPSLTAEYDEDSPGG  127 (298)
T ss_dssp             CSEEEECCCC-CSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSS--C-CSEEEEEEEGGGSCCCSSCCBCTTCCCS
T ss_pred             CCEEEEeccC-cccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCC--C-ceEEEEEeeeeeecCCCCCcccccCCcc
Confidence            9999999985 3334444566777788889999888877776643211  1 3457777776443221         011


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCC---------CCChhh
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRW---------LDVKND  228 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~d  228 (266)
                      ....|+..+...+.     .......++++..+.||.|..|.....   ....... .......+         ... +|
T Consensus       128 ~~~~~~~~~~~~e~-----~~~~~~~~~~~~~~r~~~v~g~~~~~~---~~~~~~~-~~~~~~~~g~g~~~~~~ihv-~D  197 (298)
T 4b4o_A          128 DFDFFSNLVTKWEA-----AARLPGDSTRQVVVRSGVVLGRGGGAM---GHMLLPF-RLGLGGPIGSGHQFFPWIHI-GD  197 (298)
T ss_dssp             CSSHHHHHHHHHHH-----HHCCSSSSSEEEEEEECEEECTTSHHH---HHHHHHH-HTTCCCCBTTSCSBCCEEEH-HH
T ss_pred             ccchhHHHHHHHHH-----HHHhhccCCceeeeeeeeEEcCCCCch---hHHHHHH-hcCCcceecccCceeecCcH-HH
Confidence            23344444444432     123345689999999999988753211   1111111 11111111         122 49


Q ss_pred             HHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          229 LASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       229 va~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      +++++.+++...  ...| .+++.++..++..+
T Consensus       198 va~a~~~~~~~~--~~~g-~yn~~~~~~~t~~e  227 (298)
T 4b4o_A          198 LAGILTHALEAN--HVHG-VLNGVAPSSATNAE  227 (298)
T ss_dssp             HHHHHHHHHHCT--TCCE-EEEESCSCCCBHHH
T ss_pred             HHHHHHHHHhCC--CCCC-eEEEECCCccCHHH
Confidence            999999998653  2445 78887776665443

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.32  E-value=1.3e-13  Score=115.40  Aligned_cols=109  Identities=16%  Similarity=0.171  Sum_probs=79.4

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++|||||++|+|++++..|+++|++|++++ +.++.+++.+++...    .++.++.+|+++.+  +++++++  
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~----~~~~~~~~D~~~~~--~~~~~~~--  187 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR----FKVNVTAAETADDA--SRAEAVK--  187 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH----HTCCCEEEECCSHH--HHHHHTT--
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc----CCcEEEEecCCCHH--HHHHHHH--
Confidence            46899999999999999999999999999999988 556677777666532    14567889999987  7766654  


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCH-HHHHHHHHccchHHH
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGE-DEFKKLVKINFVAPW  123 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~-~~~~~~~~~n~~~~~  123 (266)
                           .+|++|||+|......++.+.+. ++++..+++|+.+++
T Consensus       188 -----~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 -----GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             -----TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             -----hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence                 48999999985211112212222 444557777887766

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.10  E-value=2.4e-10  Score=91.34  Aligned_cols=154  Identities=12%  Similarity=0.107  Sum_probs=91.0

Q ss_pred             CCCCcEEEEecC----------------CCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEec
Q 024517            2 ENQAKRVLLTSD----------------GDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM   65 (266)
Q Consensus         2 ~l~~k~vlItGa----------------~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   65 (266)
                      +|+||++|||||                +++||+++|++|+++|++|++++++..++         .+  ..+  -.+|+
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~---------~~--~g~--~~~dv   71 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP---------TP--PFV--KRVDV   71 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC---------CC--TTE--EEEEC
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccc---------cC--CCC--eEEcc
Confidence            368999999999                68999999999999999999988433321         01  122  23566


Q ss_pred             CCCchHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHH--HHccchHHHHHHHHHHHHHhccCCCCeEE
Q 024517           66 EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKL--VKINFVAPWFLLKAVGRRMKESKAGGSIV  143 (266)
Q Consensus        66 ~~~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~l~~~~~~~~~~~~~~g~iv  143 (266)
                      ++     ++++++.+.+.++++|++|||||+. ...+. ....+.+.+.  -+.++.-.+.....+++.+.+...++.+ 
T Consensus        72 ~~-----~~~~~~~v~~~~~~~Dili~~Aav~-d~~p~-~~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~~~-  143 (226)
T 1u7z_A           72 MT-----ALEMEAAVNASVQQQNIFIGCAAVA-DYRAA-TVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPY-  143 (226)
T ss_dssp             CS-----HHHHHHHHHHHGGGCSEEEECCBCC-SEEES-SCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCE-
T ss_pred             Cc-----HHHHHHHHHHhcCCCCEEEECCccc-CCCCc-cCChHHhccccccCCceEEEEeecHHHHHHHHhhhcCCcE-
Confidence            54     4567788888899999999999974 22222 1222222320  0223333444455566666553212332 


Q ss_pred             EEecccccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCc
Q 024517          144 FLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL  194 (266)
Q Consensus       144 ~iss~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~  194 (266)
                       +-+..+. .                +.+.+.+..++..+|+.+....|-.
T Consensus       144 -~VGFaaE-t----------------~~l~e~A~~kL~~k~~d~ivaN~~~  176 (226)
T 1u7z_A          144 -VVGFAAE-T----------------NNVEEYARQKRIRKNLDLICANDVS  176 (226)
T ss_dssp             -EEEEEEE-S----------------SSHHHHHHHHHHHHTCSEEEEEECS
T ss_pred             -EEEcchh-h----------------chHHHHHHHHHHhcCCCEEEEeecc
Confidence             1222111 1                2255556666666777666666543

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.06  E-value=2.1e-10  Score=97.70  Aligned_cols=164  Identities=13%  Similarity=0.072  Sum_probs=107.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCC-------eEEEEeccc---ccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGC-------RLVLVGNER---RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFD   74 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~-------~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~   74 (266)
                      ..+++||||+|.||.+++..|+++|.       +|+++++.+   +.+.....+...     .+.++ .|+.+.+  +..
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~-----~~~~~-~di~~~~--~~~   75 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC-----AFPLL-AGLEATD--DPK   75 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT-----TCTTE-EEEEEES--CHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc-----ccccc-CCeEecc--ChH
Confidence            35799999999999999999999986       799988432   222222233211     11222 5777655  444


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccc---
Q 024517           75 EAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGA---  151 (266)
Q Consensus        75 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~---  151 (266)
                      +.+       .+.|++||.||....  +  ..+   ....++.|+.++..+++++..+-   +.+.+++++|+....   
T Consensus        76 ~a~-------~~~D~Vih~Ag~~~~--~--~~~---~~~~~~~Nv~~t~~l~~a~~~~~---~~~~~vvv~snp~~~~~~  138 (327)
T 1y7t_A           76 VAF-------KDADYALLVGAAPRK--A--GME---RRDLLQVNGKIFTEQGRALAEVA---KKDVKVLVVGNPANTNAL  138 (327)
T ss_dssp             HHT-------TTCSEEEECCCCCCC--T--TCC---HHHHHHHHHHHHHHHHHHHHHHS---CTTCEEEECSSSHHHHHH
T ss_pred             HHh-------CCCCEEEECCCcCCC--C--CCC---HHHHHHHHHHHHHHHHHHHHhhc---CCCeEEEEeCCchhhhHH
Confidence            333       368999999987321  1  122   35578999999999988886642   114688888886521   


Q ss_pred             ----ccCCCCCchhhHHhHHHHHHHHHHHHHHhCC--CCcE-EEEEecC
Q 024517          152 ----ERGLYPGAAAYGACAASIHQLVRTAAMEIGK--HKIR-VNGIARG  193 (266)
Q Consensus       152 ----~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~--~~i~-v~~v~pG  193 (266)
                          ....+++...|+.+|...+.+.+.+++.++-  ..+| .+.+.|+
T Consensus       139 ~~~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h  187 (327)
T 1y7t_A          139 IAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNH  187 (327)
T ss_dssp             HHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCS
T ss_pred             HHHHHcCCCChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCC
Confidence                1101345567999999999999988887642  2355 2455554

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.97  E-value=5e-10  Score=89.66  Aligned_cols=77  Identities=18%  Similarity=0.271  Sum_probs=60.1

Q ss_pred             CCcEEEEecC----------------CCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCC
Q 024517            4 QAKRVLLTSD----------------GDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEE   67 (266)
Q Consensus         4 ~~k~vlItGa----------------~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   67 (266)
                      +||++|||||                +|++|.++|++|+++|++|++++++..+..       ..+  ..     +|+.+
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-------~~~--~~-----~~~~~   67 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP-------EPH--PN-----LSIRE   67 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC-------CCC--TT-----EEEEE
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------cCC--CC-----eEEEE
Confidence            5899999999                778999999999999999999985433221       001  12     34455


Q ss_pred             CchHHHHHHHHHHHHHhCCCCEEEEcCCC
Q 024517           68 DREGAFDEAVDKACQILGNLDAFVHCYTY   96 (266)
Q Consensus        68 ~~~~~v~~~~~~~~~~~g~id~li~~ag~   96 (266)
                      .+  ++.++++.+.+.++++|++|+||++
T Consensus        68 v~--s~~em~~~v~~~~~~~Dili~aAAv   94 (232)
T 2gk4_A           68 IT--NTKDLLIEMQERVQDYQVLIHSMAV   94 (232)
T ss_dssp             CC--SHHHHHHHHHHHGGGCSEEEECSBC
T ss_pred             Hh--HHHHHHHHHHHhcCCCCEEEEcCcc
Confidence            55  6778899999999999999999997

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.72  E-value=1.2e-08  Score=77.33  Aligned_cols=77  Identities=14%  Similarity=0.160  Sum_probs=60.1

Q ss_pred             chHHHHHHHHHHcCCeEEEEec-ccccH---HHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCCCCEEE
Q 024517           16 EISKNIAFHLAKRGCRLVLVGN-ERRLS---SVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFV   91 (266)
Q Consensus        16 giG~~ia~~l~~~g~~v~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~id~li   91 (266)
                      .++.++++.|+++|++|++..+ .+...   +..+.+.+.   |.+...+++|++++..++++++++.+.+.+|+ |++|
T Consensus        27 ~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~---G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLV  102 (157)
T 3gxh_A           27 LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA---GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLV  102 (157)
T ss_dssp             CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT---TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEE
T ss_pred             CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc---CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEE
Confidence            4789999999999999999873 33321   234444433   46788899999999223999999999998999 9999


Q ss_pred             EcCCC
Q 024517           92 HCYTY   96 (266)
Q Consensus        92 ~~ag~   96 (266)
                      ||+|+
T Consensus       103 nnAgg  107 (157)
T 3gxh_A          103 HCLAN  107 (157)
T ss_dssp             ECSBS
T ss_pred             ECCCC
Confidence            99987

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.69  E-value=4.7e-08  Score=69.86  Aligned_cols=76  Identities=14%  Similarity=0.249  Sum_probs=58.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcC-CeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRG-CRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g-~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      +..+++++|+|+ |++|+++++.|.++| ++|++++ ++++.+...    .     ..+.++.+|+++.+  ++.+++  
T Consensus         2 ~~~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~-----~~~~~~~~d~~~~~--~~~~~~--   67 (118)
T 3ic5_A            2 NAMRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R-----MGVATKQVDAKDEA--GLAKAL--   67 (118)
T ss_dssp             CTTCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T-----TTCEEEECCTTCHH--HHHHHT--
T ss_pred             CCCcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h-----CCCcEEEecCCCHH--HHHHHH--
Confidence            345689999999 999999999999999 8999988 444433322    1     35677889999876  666555  


Q ss_pred             HHHHhCCCCEEEEcCCC
Q 024517           80 ACQILGNLDAFVHCYTY   96 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~   96 (266)
                           .++|++|++++.
T Consensus        68 -----~~~d~vi~~~~~   79 (118)
T 3ic5_A           68 -----GGFDAVISAAPF   79 (118)
T ss_dssp             -----TTCSEEEECSCG
T ss_pred             -----cCCCEEEECCCc
Confidence                 378999999864

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.56  E-value=3.4e-11  Score=106.18  Aligned_cols=43  Identities=16%  Similarity=0.243  Sum_probs=36.4

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSV   44 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~   44 (266)
                      |.+.||+++|||++ +||+++|+.|...|++|++++ ++.+.++.
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~A  304 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQA  304 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            35789999999998 999999999999999999998 55444443

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.53  E-value=2.8e-07  Score=80.60  Aligned_cols=81  Identities=9%  Similarity=0.142  Sum_probs=66.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcC---CeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRG---CRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g---~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++++|+|+ |+||+++++.|+++|   ..|++++ +.++++++.+++....  +.++..+.+|+++.+  ++++++++. 
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~--~~~~~~~~~D~~d~~--~l~~~l~~~-   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG--YGEIDITTVDADSIE--ELVALINEV-   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT--CCCCEEEECCTTCHH--HHHHHHHHH-
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc--CCceEEEEecCCCHH--HHHHHHHhh-
Confidence            47899999 799999999999998   3888888 7777777777765321  136888999999988  888888765 


Q ss_pred             HHhCCCCEEEEcCCC
Q 024517           82 QILGNLDAFVHCYTY   96 (266)
Q Consensus        82 ~~~g~id~li~~ag~   96 (266)
                          ++|++|||++.
T Consensus        76 ----~~DvVin~ag~   86 (405)
T 4ina_A           76 ----KPQIVLNIALP   86 (405)
T ss_dssp             ----CCSEEEECSCG
T ss_pred             ----CCCEEEECCCc
Confidence                69999999975

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.48  E-value=3.7e-07  Score=71.60  Aligned_cols=102  Identities=14%  Similarity=0.093  Sum_probs=68.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .++++||+||++|||.++++.+...|++|++++ +.++.+.    +.+.   +..   ..+|.++.+  ..+.+.+... 
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~----~~~~---g~~---~~~d~~~~~--~~~~~~~~~~-  104 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM----LSRL---GVE---YVGDSRSVD--FADEILELTD-  104 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH----HHTT---CCS---EEEETTCST--HHHHHHHHTT-
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHH----HHHc---CCC---EEeeCCcHH--HHHHHHHHhC-
Confidence            578999999999999999999999999999988 4333322    2221   222   235887766  4444433221 


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                       .+++|++|+|+|.            +               ..+.+++.++.   +|+++.+++..
T Consensus       105 -~~~~D~vi~~~g~------------~---------------~~~~~~~~l~~---~G~~v~~g~~~  140 (198)
T 1pqw_A          105 -GYGVDVVLNSLAG------------E---------------AIQRGVQILAP---GGRFIELGKKD  140 (198)
T ss_dssp             -TCCEEEEEECCCT------------H---------------HHHHHHHTEEE---EEEEEECSCGG
T ss_pred             -CCCCeEEEECCch------------H---------------HHHHHHHHhcc---CCEEEEEcCCC
Confidence             1369999999863            0               13445555554   68999998754

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.46  E-value=3.5e-07  Score=77.78  Aligned_cols=78  Identities=14%  Similarity=0.356  Sum_probs=56.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .++++||+||++|||.++++.+...|++|++++ +.++++.. +++      +..   ..+|.++.+  ++.+.+.+...
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~------g~~---~~~d~~~~~--~~~~~~~~~~~  212 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI------GFD---AAFNYKTVN--SLEEALKKASP  212 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT------TCS---EEEETTSCS--CHHHHHHHHCT
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc------CCc---EEEecCCHH--HHHHHHHHHhC
Confidence            588999999999999999999999999999998 54444333 332      122   335888744  45555544432


Q ss_pred             HhCCCCEEEEcCC
Q 024517           83 ILGNLDAFVHCYT   95 (266)
Q Consensus        83 ~~g~id~li~~ag   95 (266)
                        +++|++|+|+|
T Consensus       213 --~~~d~vi~~~g  223 (333)
T 1v3u_A          213 --DGYDCYFDNVG  223 (333)
T ss_dssp             --TCEEEEEESSC
T ss_pred             --CCCeEEEECCC
Confidence              57999999997

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.43  E-value=2.3e-07  Score=82.10  Aligned_cols=76  Identities=20%  Similarity=0.315  Sum_probs=57.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++|+++|+| +|++|+++++.|++.|++|+++++ .++.    +.+.+..   ..+..+.+|+++.+  ++.+++     
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a----~~la~~~---~~~~~~~~Dv~d~~--~l~~~l-----   66 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESA----KKLSAGV---QHSTPISLDVNDDA--ALDAEV-----   66 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHH----HHTTTTC---TTEEEEECCTTCHH--HHHHHH-----
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHH----HHHHHhc---CCceEEEeecCCHH--HHHHHH-----
Confidence            478999997 799999999999999999998884 3332    2332221   24678889999877  666655     


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                        .++|++||+++.
T Consensus        67 --~~~DvVIn~a~~   78 (450)
T 1ff9_A           67 --AKHDLVISLIPY   78 (450)
T ss_dssp             --TTSSEEEECCC-
T ss_pred             --cCCcEEEECCcc
Confidence              369999999976

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.40  E-value=3.5e-07  Score=78.95  Aligned_cols=105  Identities=19%  Similarity=0.236  Sum_probs=68.8

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++++++|+|+ |+||+.+++.+...|++|++++ +.++++...+.+      +..   +.+|.++.+  ++.+.+.   
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~------g~~---~~~~~~~~~--~l~~~~~---  228 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF------GGR---VITLTATEA--NIKKSVQ---  228 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT------TTS---EEEEECCHH--HHHHHHH---
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc------Cce---EEEecCCHH--HHHHHHh---
Confidence            67899999999 8999999999999999999999 555444433222      123   446777655  6555543   


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                          ..|++|++++.....                    .+..+.+..++.|++   ++.||++++..
T Consensus       229 ----~~DvVi~~~g~~~~~--------------------~~~li~~~~l~~mk~---gg~iV~v~~~~  269 (369)
T 2eez_A          229 ----HADLLIGAVLVPGAK--------------------APKLVTRDMLSLMKE---GAVIVDVAVDQ  269 (369)
T ss_dssp             ----HCSEEEECCC---------------------------CCSCHHHHTTSCT---TCEEEECC---
T ss_pred             ----CCCEEEECCCCCccc--------------------cchhHHHHHHHhhcC---CCEEEEEecCC
Confidence                589999999862111                    112234566666753   68999998754

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.37  E-value=5.3e-08  Score=87.94  Aligned_cols=99  Identities=11%  Similarity=0.125  Sum_probs=63.6

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++|+++||||+ |+|++++..|+++|++|++++ +.++.+++.+++.      .++    .++.+.+  .   .     
T Consensus       362 l~~k~vlV~GaG-Gig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~------~~~----~~~~dl~--~---~-----  420 (523)
T 2o7s_A          362 LASKTVVVIGAG-GAGKALAYGAKEKGAKVVIANRTYERALELAEAIG------GKA----LSLTDLD--N---Y-----  420 (523)
T ss_dssp             ----CEEEECCS-HHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT------C-C----EETTTTT--T---C-----
T ss_pred             cCCCEEEEECCc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC------Cce----eeHHHhh--h---c-----
Confidence            568899999995 999999999999999999988 5556666555441      122    1232211  1   0     


Q ss_pred             HHhCCCCEEEEcCCCCCC----CCCCCCCCHHHHHHHHHccchHHH
Q 024517           82 QILGNLDAFVHCYTYEGK----MQDPLQVGEDEFKKLVKINFVAPW  123 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~  123 (266)
                       ..+.+|++|||+|....    ..++.+.+.+++...+++|+.+..
T Consensus       421 -~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~  465 (523)
T 2o7s_A          421 -HPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRI  465 (523)
T ss_dssp             ---CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred             -cccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence             11458999999987321    134555667778889999998753

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.37  E-value=2.8e-06  Score=72.15  Aligned_cols=157  Identities=15%  Similarity=0.105  Sum_probs=96.7

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCC-------eEEEEe-c----ccccHHHHHHHhcccCCCCCeEEEEEecCCC
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGC-------RLVLVG-N----ERRLSSVAEKMMGSLKGGQPVEVVGLDMEED   68 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~-------~v~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   68 (266)
                      |+.+..+++||||+|.+|.+++..|+.+|.       .|++++ +    .++++.....+....   ...   ..|+...
T Consensus         1 m~~~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~---~~~---~~~i~~~   74 (329)
T 1b8p_A            1 MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCA---FPL---LAGMTAH   74 (329)
T ss_dssp             --CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTT---CTT---EEEEEEE
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhc---ccc---cCcEEEe
Confidence            544567899999999999999999999885       788988 5    333444444454321   111   1355544


Q ss_pred             chHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           69 REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                      .  +..+.+       ...|++||+||...  .+  ..+..   ..+..|+.....+++.+.++-   +.++.++++|.+
T Consensus        75 ~--~~~~al-------~~aD~Vi~~ag~~~--~~--g~~r~---dl~~~N~~i~~~i~~~i~~~~---~p~a~ii~~SNP  135 (329)
T 1b8p_A           75 A--DPMTAF-------KDADVALLVGARPR--GP--GMERK---DLLEANAQIFTVQGKAIDAVA---SRNIKVLVVGNP  135 (329)
T ss_dssp             S--SHHHHT-------TTCSEEEECCCCCC--CT--TCCHH---HHHHHHHHHHHHHHHHHHHHS---CTTCEEEECSSS
T ss_pred             c--CcHHHh-------CCCCEEEEeCCCCC--CC--CCCHH---HHHHHHHHHHHHHHHHHHHhc---CCCeEEEEccCc
Confidence            4  333333       46899999998632  11  23333   356677776666666665431   125799999986


Q ss_pred             ccc-------ccCCCCCchhhHHhHHHHHHHHHHHHHHhCC
Q 024517          149 IGA-------ERGLYPGAAAYGACAASIHQLVRTAAMEIGK  182 (266)
Q Consensus       149 ~~~-------~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~  182 (266)
                      ...       ....+|....|+.++---..+...+++.++-
T Consensus       136 v~~~t~~~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lgv  176 (329)
T 1b8p_A          136 ANTNAYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTGK  176 (329)
T ss_dssp             HHHHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTC
T ss_pred             hHHHHHHHHHHcCCCCHHHEEEeecHHHHHHHHHHHHHhCc
Confidence            531       2112455455788766566777778877653

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.30  E-value=3.6e-06  Score=70.71  Aligned_cols=81  Identities=11%  Similarity=0.185  Sum_probs=58.5

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-c---ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-N---ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEA   76 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~   76 (266)
                      ++++|++||+|+ ||+|++++..|++.|+ +|++++ +   .++.+++++++....    ...+...++.+.+  ++.+.
T Consensus       151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~----~~~~~~~~~~~~~--~l~~~  223 (315)
T 3tnl_A          151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKT----DCKAQLFDIEDHE--QLRKE  223 (315)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS----SCEEEEEETTCHH--HHHHH
T ss_pred             CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhc----CCceEEeccchHH--HHHhh
Confidence            468999999998 6999999999999999 899988 5   456666666665442    2334445666544  44333


Q ss_pred             HHHHHHHhCCCCEEEEcCCC
Q 024517           77 VDKACQILGNLDAFVHCYTY   96 (266)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~   96 (266)
                      +       ...|+|||+.+.
T Consensus       224 l-------~~aDiIINaTp~  236 (315)
T 3tnl_A          224 I-------AESVIFTNATGV  236 (315)
T ss_dssp             H-------HTCSEEEECSST
T ss_pred             h-------cCCCEEEECccC
Confidence            3       358999999764

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.29  E-value=6.6e-07  Score=74.53  Aligned_cols=78  Identities=14%  Similarity=0.271  Sum_probs=55.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|+++|+|++ |+|+++++.|+++| +|++++ +.++.+++.+++.....  ... .+.+|+++.            
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~--~~~-~~~~d~~~~------------  187 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLN--KKF-GEEVKFSGL------------  187 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHT--CCH-HHHEEEECT------------
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcc--ccc-ceeEEEeeH------------
Confidence            4689999999998 99999999999999 999998 55666777666643210  010 123455432            


Q ss_pred             HHHhCCCCEEEEcCCC
Q 024517           81 CQILGNLDAFVHCYTY   96 (266)
Q Consensus        81 ~~~~g~id~li~~ag~   96 (266)
                      .+.++++|++|||+|.
T Consensus       188 ~~~~~~~DilVn~ag~  203 (287)
T 1nvt_A          188 DVDLDGVDIIINATPI  203 (287)
T ss_dssp             TCCCTTCCEEEECSCT
T ss_pred             HHhhCCCCEEEECCCC
Confidence            1234689999999987

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.28  E-value=2.7e-06  Score=72.70  Aligned_cols=103  Identities=17%  Similarity=0.220  Sum_probs=71.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .++++||+|++++||.++++.+...|++|++++ +.++. +..+++      +..   ..+|.++.+  ++.+.+.++..
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~-~~~~~~------g~~---~~~d~~~~~--~~~~~~~~~~~  236 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE-ELFRSI------GGE---VFIDFTKEK--DIVGAVLKATD  236 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHH-HHHHHT------TCC---EEEETTTCS--CHHHHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHH-HHHHHc------CCc---eEEecCccH--hHHHHHHHHhC
Confidence            578999999999999999999999999999988 54444 333332      222   235888655  55555555433


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                        +++|++|+++|..                          ...+.+++.++.   +|+++.+++..
T Consensus       237 --~~~D~vi~~~g~~--------------------------~~~~~~~~~l~~---~G~iv~~g~~~  272 (347)
T 2hcy_A          237 --GGAHGVINVSVSE--------------------------AAIEASTRYVRA---NGTTVLVGMPA  272 (347)
T ss_dssp             --SCEEEEEECSSCH--------------------------HHHHHHTTSEEE---EEEEEECCCCT
T ss_pred             --CCCCEEEECCCcH--------------------------HHHHHHHHHHhc---CCEEEEEeCCC
Confidence              3799999999741                          033455555543   58999988753

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.21  E-value=5.7e-06  Score=70.21  Aligned_cols=79  Identities=9%  Similarity=0.083  Sum_probs=55.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .++++||+||+++||.++++.+...|++|++++ +.++++.. +++      +..   ..+|.++.+  ..+++.+... 
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~-~~~------g~~---~~~d~~~~~--~~~~i~~~~~-  211 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETA-RKL------GCH---HTINYSTQD--FAEVVREITG-  211 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH------TCS---EEEETTTSC--HHHHHHHHHT-
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc------CCC---EEEECCCHH--HHHHHHHHhC-
Confidence            578999999999999999999999999999998 44344333 332      222   235777766  4444433221 


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                       ..++|++|+|+|.
T Consensus       212 -~~~~d~vi~~~g~  224 (333)
T 1wly_A          212 -GKGVDVVYDSIGK  224 (333)
T ss_dssp             -TCCEEEEEECSCT
T ss_pred             -CCCCeEEEECCcH
Confidence             1369999999974

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.20  E-value=3e-06  Score=69.92  Aligned_cols=74  Identities=12%  Similarity=0.210  Sum_probs=54.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++ +.++.+++.+++...    ..     ++..+.+  ++.      
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~----~~-----~~~~~~~--~~~------  177 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT----GS-----IQALSMD--ELE------  177 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG----SS-----EEECCSG--GGT------
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc----CC-----eeEecHH--Hhc------
Confidence            467999999998 6899999999999999999998 556666666665321    12     2333333  221      


Q ss_pred             HHHhCCCCEEEEcCCC
Q 024517           81 CQILGNLDAFVHCYTY   96 (266)
Q Consensus        81 ~~~~g~id~li~~ag~   96 (266)
                        . +++|++|++++.
T Consensus       178 --~-~~~DivVn~t~~  190 (271)
T 1nyt_A          178 --G-HEFDLIINATSS  190 (271)
T ss_dssp             --T-CCCSEEEECCSC
T ss_pred             --c-CCCCEEEECCCC
Confidence              1 589999999986

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.19  E-value=2.4e-06  Score=75.88  Aligned_cols=77  Identities=18%  Similarity=0.301  Sum_probs=56.0

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHc-CCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKR-GCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~-g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++++++++|+|+ |++|++++..|+++ |++|++++ +.++.+++.+    .    ..+..+.+|+++.+  ++.++++ 
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~----~----~~~~~~~~D~~d~~--~l~~~l~-   87 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAK----P----SGSKAISLDVTDDS--ALDKVLA-   87 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHG----G----GTCEEEECCTTCHH--HHHHHHH-
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHH----h----cCCcEEEEecCCHH--HHHHHHc-
Confidence            467899999997 99999999999998 77888888 4444443332    1    13456778998876  6665553 


Q ss_pred             HHHHhCCCCEEEEcCCC
Q 024517           80 ACQILGNLDAFVHCYTY   96 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~   96 (266)
                            ++|+|||+++.
T Consensus        88 ------~~DvVIn~tp~   98 (467)
T 2axq_A           88 ------DNDVVISLIPY   98 (467)
T ss_dssp             ------TSSEEEECSCG
T ss_pred             ------CCCEEEECCch
Confidence                  68999999976

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.19  E-value=2.6e-06  Score=62.92  Aligned_cols=74  Identities=9%  Similarity=0.157  Sum_probs=54.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +.++++|+|+ |.+|.++++.|.++|++|++++ ++++.++.    .+     ....++..|.++++  .++++      
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~----~~-----~~~~~~~gd~~~~~--~l~~~------   66 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELL----ED-----EGFDAVIADPTDES--FYRSL------   66 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHH----HH-----TTCEEEECCTTCHH--HHHHS------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHH----HH-----CCCcEEECCCCCHH--HHHhC------
Confidence            4578999998 6699999999999999999999 54443332    22     24567888999876  54432      


Q ss_pred             HhCCCCEEEEcCC
Q 024517           83 ILGNLDAFVHCYT   95 (266)
Q Consensus        83 ~~g~id~li~~ag   95 (266)
                      ...+.|++|.+.+
T Consensus        67 ~~~~~d~vi~~~~   79 (141)
T 3llv_A           67 DLEGVSAVLITGS   79 (141)
T ss_dssp             CCTTCSEEEECCS
T ss_pred             CcccCCEEEEecC
Confidence            1246899998875

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.18  E-value=4.3e-06  Score=70.77  Aligned_cols=103  Identities=10%  Similarity=0.067  Sum_probs=69.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .++++||+||+++||.++++.+...|++|++++ +.++++.. .++      +..   ..+|.++.+  ..+++.+... 
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~-~~~------g~~---~~~~~~~~~--~~~~~~~~~~-  206 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSA-LKA------GAW---QVINYREED--LVERLKEITG-  206 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HHH------TCS---EEEETTTSC--HHHHHHHHTT-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc------CCC---EEEECCCcc--HHHHHHHHhC-
Confidence            588999999999999999999999999999988 44443332 232      122   235777766  4444443221 


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                       ..++|++|+|+|.  .                         ..+.+++.++.   +|+++.+++..+
T Consensus       207 -~~~~D~vi~~~g~--~-------------------------~~~~~~~~l~~---~G~iv~~g~~~~  243 (327)
T 1qor_A          207 -GKKVRVVYDSVGR--D-------------------------TWERSLDCLQR---RGLMVSFGNSSG  243 (327)
T ss_dssp             -TCCEEEEEECSCG--G-------------------------GHHHHHHTEEE---EEEEEECCCTTC
T ss_pred             -CCCceEEEECCch--H-------------------------HHHHHHHHhcC---CCEEEEEecCCC
Confidence             1369999999983  1                         12445555544   689999987543

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.16  E-value=2.7e-06  Score=72.55  Aligned_cols=80  Identities=11%  Similarity=0.258  Sum_probs=55.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|+++||+||+++||..+++.+...|++|++++ +.++++...+++      +..   ..+|.++.+  ++.+.+.++..
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~------g~~---~~~d~~~~~--~~~~~~~~~~~  223 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF------GFD---DAFNYKEES--DLTAALKRCFP  223 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS------CCS---EEEETTSCS--CSHHHHHHHCT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------CCc---eEEecCCHH--HHHHHHHHHhC
Confidence            588999999999999999999999999999988 444433322122      222   234777654  44444444321


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                        +++|++|+|+|.
T Consensus       224 --~~~d~vi~~~g~  235 (345)
T 2j3h_A          224 --NGIDIYFENVGG  235 (345)
T ss_dssp             --TCEEEEEESSCH
T ss_pred             --CCCcEEEECCCH
Confidence              479999999873

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.14  E-value=9.5e-06  Score=69.46  Aligned_cols=79  Identities=10%  Similarity=0.082  Sum_probs=54.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .++++||+||+++||.++++.+...|++|++++ ++++.+ ..+++      +..   ..+|.++.+  ..+++.+..  
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~------ga~---~~~d~~~~~--~~~~~~~~~--  235 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK-IVLQN------GAH---EVFNHREVN--YIDKIKKYV--  235 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHT------TCS---EEEETTSTT--HHHHHHHHH--
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH-HHHHc------CCC---EEEeCCCch--HHHHHHHHc--
Confidence            578999999999999999999999999999988 444433 33332      122   235777655  433333221  


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                      ...++|++|+|+|.
T Consensus       236 ~~~~~D~vi~~~G~  249 (351)
T 1yb5_A          236 GEKGIDIIIEMLAN  249 (351)
T ss_dssp             CTTCEEEEEESCHH
T ss_pred             CCCCcEEEEECCCh
Confidence            11269999999874

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.14  E-value=1.2e-05  Score=68.89  Aligned_cols=79  Identities=11%  Similarity=0.217  Sum_probs=55.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|+++||+||+++||.++++.+...|++|++++ +.++++.. +++      +..   ..+|.++.+  ..+++.+... 
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~------g~~---~~~~~~~~~--~~~~~~~~~~-  228 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL------GAA---AGFNYKKED--FSEATLKFTK-  228 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH------TCS---EEEETTTSC--HHHHHHHHTT-
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc------CCc---EEEecCChH--HHHHHHHHhc-
Confidence            578999999999999999999999999999988 54444333 333      222   235777766  4443332211 


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                       .+++|++|+|+|.
T Consensus       229 -~~~~d~vi~~~G~  241 (354)
T 2j8z_A          229 -GAGVNLILDCIGG  241 (354)
T ss_dssp             -TSCEEEEEESSCG
T ss_pred             -CCCceEEEECCCc
Confidence             1369999999985

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.11  E-value=4.7e-06  Score=71.47  Aligned_cols=101  Identities=14%  Similarity=0.249  Sum_probs=66.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +++||+||+++||..+++.+...|+ +|++++ +.++.+...+++      +..   ..+|.++.+  ..+.+. +..  
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~------g~~---~~~d~~~~~--~~~~~~-~~~--  227 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL------GFD---AAINYKKDN--VAEQLR-ESC--  227 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS------CCS---EEEETTTSC--HHHHHH-HHC--
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc------CCc---eEEecCchH--HHHHHH-Hhc--
Confidence            8999999999999999999999999 999988 444443332222      122   235777755  333322 221  


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                      .+++|++|+|+|.            +               ..+.+++.++.   +|+++.++....
T Consensus       228 ~~~~d~vi~~~G~------------~---------------~~~~~~~~l~~---~G~iv~~G~~~~  264 (357)
T 2zb4_A          228 PAGVDVYFDNVGG------------N---------------ISDTVISQMNE---NSHIILCGQISQ  264 (357)
T ss_dssp             TTCEEEEEESCCH------------H---------------HHHHHHHTEEE---EEEEEECCCGGG
T ss_pred             CCCCCEEEECCCH------------H---------------HHHHHHHHhcc---CcEEEEECCccc
Confidence            1369999999973            0               13345555544   689999887543

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.11  E-value=1.2e-06  Score=64.68  Aligned_cols=77  Identities=10%  Similarity=0.082  Sum_probs=52.3

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +++++++|+|+ |++|+.+++.|.++|++|+++++.+   +..+.+..     ....++..|.++.+  .+.++      
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~---~~~~~~~~-----~~~~~~~~d~~~~~--~l~~~------   66 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINE---EKVNAYAS-----YATHAVIANATEEN--ELLSL------   66 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCH---HHHHTTTT-----TCSEEEECCTTCHH--HHHTT------
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHH-----hCCEEEEeCCCCHH--HHHhc------
Confidence            56788999998 9999999999999999999988322   12222221     12355677887654  43322      


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                      ...+.|++|++++.
T Consensus        67 ~~~~~d~vi~~~~~   80 (144)
T 2hmt_A           67 GIRNFEYVIVAIGA   80 (144)
T ss_dssp             TGGGCSEEEECCCS
T ss_pred             CCCCCCEEEECCCC
Confidence            13468999999864

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.10  E-value=6.5e-06  Score=69.96  Aligned_cols=102  Identities=17%  Similarity=0.250  Sum_probs=68.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|+++||+|++++||..+++.+...|++|++++ +.++.+...+++      +..   ...|.++.+  ..+.+.+..  
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~------g~~---~~~~~~~~~--~~~~~~~~~--  215 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL------GFD---GAIDYKNED--LAAGLKREC--  215 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT------CCS---EEEETTTSC--HHHHHHHHC--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------CCC---EEEECCCHH--HHHHHHHhc--
Confidence            588999999999999999999999999999998 554444332332      222   235777765  333333222  


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                       .+++|++|+|+|..                           ..+.+++.++.   +|+++.++...
T Consensus       216 -~~~~d~vi~~~g~~---------------------------~~~~~~~~l~~---~G~iv~~G~~~  251 (336)
T 4b7c_A          216 -PKGIDVFFDNVGGE---------------------------ILDTVLTRIAF---KARIVLCGAIS  251 (336)
T ss_dssp             -TTCEEEEEESSCHH---------------------------HHHHHHTTEEE---EEEEEECCCGG
T ss_pred             -CCCceEEEECCCcc---------------------------hHHHHHHHHhh---CCEEEEEeecc
Confidence             24699999999741                           12344444543   68999988765

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.09  E-value=1.2e-05  Score=71.02  Aligned_cols=110  Identities=14%  Similarity=0.101  Sum_probs=69.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEe--cCCC-------chHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD--MEED-------REGAF   73 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D--~~~~-------~~~~v   73 (266)
                      .|++|||+||+++||..+++.+...|++|++++ +.++++ ..+++      +....+-..|  +.+.       ...++
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~-~~~~l------Ga~~~i~~~~~~~~~~~~~~~~~~~~~~  292 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEA-AVRAL------GCDLVINRAELGITDDIADDPRRVVETG  292 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHT------TCCCEEEHHHHTCCTTGGGCHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHhc------CCCEEEecccccccccccccccccchhh
Confidence            588999999999999999999999999999888 444433 33332      2222221111  1110       01144


Q ss_pred             HHHHHHHHHHhC-CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           74 DEAVDKACQILG-NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        74 ~~~~~~~~~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                      +++.+++.+..+ ++|++|+++|..                           .++..++.++.   +|+++.+++..+
T Consensus       293 ~~~~~~v~~~~g~g~Dvvid~~G~~---------------------------~~~~~~~~l~~---~G~iv~~G~~~~  340 (447)
T 4a0s_A          293 RKLAKLVVEKAGREPDIVFEHTGRV---------------------------TFGLSVIVARR---GGTVVTCGSSSG  340 (447)
T ss_dssp             HHHHHHHHHHHSSCCSEEEECSCHH---------------------------HHHHHHHHSCT---TCEEEESCCTTC
T ss_pred             hHHHHHHHHHhCCCceEEEECCCch---------------------------HHHHHHHHHhc---CCEEEEEecCCC
Confidence            555666666554 699999998741                           11444555543   699999987643

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.03  E-value=1.8e-05  Score=67.61  Aligned_cols=79  Identities=14%  Similarity=0.208  Sum_probs=54.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHc-CCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKR-GCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~-g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .++++||+|++++||..+++.+... |++|++++ ++++++. .+++      +..   ..+|.++.+  ..+++. +..
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~-~~~~------g~~---~~~~~~~~~--~~~~~~-~~~  236 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEA-AKRA------GAD---YVINASMQD--PLAEIR-RIT  236 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHH-HHHH------TCS---EEEETTTSC--HHHHHH-HHT
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHH-HHHh------CCC---EEecCCCcc--HHHHHH-HHh
Confidence            5789999999999999999999999 99999988 5444433 3333      222   224777655  433322 221


Q ss_pred             HHhCCCCEEEEcCCC
Q 024517           82 QILGNLDAFVHCYTY   96 (266)
Q Consensus        82 ~~~g~id~li~~ag~   96 (266)
                      .. +++|++|+++|.
T Consensus       237 ~~-~~~d~vi~~~g~  250 (347)
T 1jvb_A          237 ES-KGVDAVIDLNNS  250 (347)
T ss_dssp             TT-SCEEEEEESCCC
T ss_pred             cC-CCceEEEECCCC
Confidence            11 579999999985

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.99  E-value=1.7e-05  Score=68.17  Aligned_cols=97  Identities=13%  Similarity=0.227  Sum_probs=64.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cc---cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE---RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      +|+++||+|+ ++||..+++.+...|++|++++ +.   ++. +..+++      +  +..+  | .+ +  -.+.+.+ 
T Consensus       180 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-~~~~~~------g--a~~v--~-~~-~--~~~~~~~-  242 (366)
T 2cdc_A          180 NCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQ-TVIEET------K--TNYY--N-SS-N--GYDKLKD-  242 (366)
T ss_dssp             TTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHH-HHHHHH------T--CEEE--E-CT-T--CSHHHHH-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHH-HHHHHh------C--Ccee--c-hH-H--HHHHHHH-
Confidence            4999999999 9999999999999999999998 44   333 333333      1  2233  5 44 3  2222222 


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHH-HHHHHHHhccCCCCeEEEEeccc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLL-KAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~-~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                       . . +++|++|+++|.. .                         .+ +.+++.|+.   +|++++++...
T Consensus       243 -~-~-~~~d~vid~~g~~-~-------------------------~~~~~~~~~l~~---~G~iv~~g~~~  281 (366)
T 2cdc_A          243 -S-V-GKFDVIIDATGAD-V-------------------------NILGNVIPLLGR---NGVLGLFGFST  281 (366)
T ss_dssp             -H-H-CCEEEEEECCCCC-T-------------------------HHHHHHGGGEEE---EEEEEECSCCC
T ss_pred             -h-C-CCCCEEEECCCCh-H-------------------------HHHHHHHHHHhc---CCEEEEEecCC
Confidence             1 2 6799999999862 1                         22 455555543   58999987743

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.96  E-value=4e-05  Score=65.53  Aligned_cols=78  Identities=10%  Similarity=0.135  Sum_probs=55.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|+++||+||+++||.++++.+...|++|++++ +.++++ ..+++      +...   .+|.++.+  ..+.+.+ .. 
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~l------Ga~~---~~~~~~~~--~~~~~~~-~~-  232 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCE-ACERL------GAKR---GINYRSED--FAAVIKA-ET-  232 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHH------TCSE---EEETTTSC--HHHHHHH-HH-
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHhc------CCCE---EEeCCchH--HHHHHHH-Hh-
Confidence            578999999999999999999999999999998 555443 33333      2222   24676665  4333333 22 


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                       .+++|++|+|+|.
T Consensus       233 -~~g~Dvvid~~g~  245 (353)
T 4dup_A          233 -GQGVDIILDMIGA  245 (353)
T ss_dssp             -SSCEEEEEESCCG
T ss_pred             -CCCceEEEECCCH
Confidence             3579999999985

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.96  E-value=0.00015  Score=61.81  Aligned_cols=102  Identities=13%  Similarity=0.139  Sum_probs=66.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ++++||+||+++||..+++.+...|++|++++ +.++.+ ..+++      +...   ..|.++.+  -.+.+. +....
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~~~------Ga~~---~~~~~~~~--~~~~v~-~~~~~  231 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIA-LLKDI------GAAH---VLNEKAPD--FEATLR-EVMKA  231 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHH-HHHHH------TCSE---EEETTSTT--HHHHHH-HHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHc------CCCE---EEECCcHH--HHHHHH-HHhcC
Confidence            37999999999999999999999999999998 555544 33343      2221   24666544  333332 22221


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                       .++|++++++|..                           ..+.+++.++.   +|+++.+++..+
T Consensus       232 -~g~D~vid~~g~~---------------------------~~~~~~~~l~~---~G~iv~~G~~~~  267 (349)
T 3pi7_A          232 -EQPRIFLDAVTGP---------------------------LASAIFNAMPK---RARWIIYGRLDP  267 (349)
T ss_dssp             -HCCCEEEESSCHH---------------------------HHHHHHHHSCT---TCEEEECCCSCC
T ss_pred             -CCCcEEEECCCCh---------------------------hHHHHHhhhcC---CCEEEEEeccCC
Confidence             2699999999751                           01334455543   699999986543

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.95  E-value=5.9e-05  Score=64.74  Aligned_cols=102  Identities=11%  Similarity=0.199  Sum_probs=66.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|+++||+||+++||..+++.+...|++|++++ +.++.+ ..+++      +...   ..|.++.+   +.+.+.+.. 
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~-~~~~~------Ga~~---~~~~~~~~---~~~~~~~~~-  228 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSA-FLKSL------GCDR---PINYKTEP---VGTVLKQEY-  228 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHT------TCSE---EEETTTSC---HHHHHHHHC-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHH-HHHHc------CCcE---EEecCChh---HHHHHHHhc-
Confidence            578999999999999999999999999999988 434333 33332      2222   24666544   223332221 


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                       .+++|++|+++|.            +               ..+.+++.++.   +|+++.+++..+
T Consensus       229 -~~g~D~vid~~g~------------~---------------~~~~~~~~l~~---~G~iv~~g~~~~  265 (362)
T 2c0c_A          229 -PEGVDVVYESVGG------------A---------------MFDLAVDALAT---KGRLIVIGFISG  265 (362)
T ss_dssp             -TTCEEEEEECSCT------------H---------------HHHHHHHHEEE---EEEEEECCCGGG
T ss_pred             -CCCCCEEEECCCH------------H---------------HHHHHHHHHhc---CCEEEEEeCCCC
Confidence             1469999999873            0               13345555554   589999987643

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.95  E-value=5.1e-05  Score=63.65  Aligned_cols=81  Identities=17%  Similarity=0.234  Sum_probs=55.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-c---ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-N---ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEA   76 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~   76 (266)
                      ++++|++||+|+ ||+|++++..|++.|+ +|+++. +   .++.+++++++....    ...+...+..+.+  ...+.
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~----~~~v~~~~~~~l~--~~~~~  217 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT----DCVVTVTDLADQH--AFTEA  217 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHS----SCEEEEEETTCHH--HHHHH
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhcc----CcceEEechHhhh--hhHhh
Confidence            467999999997 7899999999999999 788888 5   455666666665432    2233344555432  22222


Q ss_pred             HHHHHHHhCCCCEEEEcCCC
Q 024517           77 VDKACQILGNLDAFVHCYTY   96 (266)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~   96 (266)
                      +       ...|+|||+.+.
T Consensus       218 l-------~~~DiIINaTp~  230 (312)
T 3t4e_A          218 L-------ASADILTNGTKV  230 (312)
T ss_dssp             H-------HHCSEEEECSST
T ss_pred             c-------cCceEEEECCcC
Confidence            2       247999999765

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.92  E-value=6.1e-05  Score=64.11  Aligned_cols=103  Identities=17%  Similarity=0.188  Sum_probs=68.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .++++||+|+++++|..+++.+...|++|++++ ++++.+.. +++      +...   .+|.++.+  -.+. +.+...
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~-~~~------ga~~---~~d~~~~~--~~~~-~~~~~~  232 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRA-KAL------GADE---TVNYTHPD--WPKE-VRRLTG  232 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH------TCSE---EEETTSTT--HHHH-HHHHTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc------CCCE---EEcCCccc--HHHH-HHHHhC
Confidence            578999999999999999999999999999988 44444333 333      2221   25777654  2222 222211


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                       ..++|++|+++|. .                          ..+.+++.++.   +|+++.+++..+
T Consensus       233 -~~~~d~vi~~~g~-~--------------------------~~~~~~~~l~~---~G~~v~~g~~~~  269 (343)
T 2eih_A          233 -GKGADKVVDHTGA-L--------------------------YFEGVIKATAN---GGRIAIAGASSG  269 (343)
T ss_dssp             -TTCEEEEEESSCS-S--------------------------SHHHHHHHEEE---EEEEEESSCCCS
T ss_pred             -CCCceEEEECCCH-H--------------------------HHHHHHHhhcc---CCEEEEEecCCC
Confidence             1369999999983 1                          13445555554   589999887543

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.88  E-value=3.7e-05  Score=63.67  Aligned_cols=79  Identities=18%  Similarity=0.376  Sum_probs=56.7

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++ +.++.+++++++....+   .+.+...+.   +  ++.+.+. 
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~---~~~i~~~~~---~--~l~~~l~-  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVG---REAVVGVDA---R--GIEDVIA-  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHT---SCCEEEECS---T--THHHHHH-
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcC---CceEEEcCH---H--HHHHHHh-
Confidence            467999999998 6999999999999999 699988 66777778777765432   222333333   3  3333332 


Q ss_pred             HHHHhCCCCEEEEcCCC
Q 024517           80 ACQILGNLDAFVHCYTY   96 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~   96 (266)
                            ..|+|||+.+.
T Consensus       194 ------~~DiVInaTp~  204 (283)
T 3jyo_A          194 ------AADGVVNATPM  204 (283)
T ss_dssp             ------HSSEEEECSST
T ss_pred             ------cCCEEEECCCC
Confidence                  36999999764

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.87  E-value=8.6e-05  Score=63.10  Aligned_cols=79  Identities=15%  Similarity=0.144  Sum_probs=54.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|+++||+|++++||..+++.+...|++|++++ +.++.+ ..+++      +...   ..|.++.+  ..+++.+..  
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~l------ga~~---~~~~~~~~--~~~~~~~~~--  209 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTE-ELLRL------GAAY---VIDTSTAP--LYETVMELT--  209 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHH-HHHHH------TCSE---EEETTTSC--HHHHHHHHT--
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHhC------CCcE---EEeCCccc--HHHHHHHHh--
Confidence            588999999999999999999999999999998 555544 33343      2222   24666655  333332221  


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                      ...++|++|+|+|.
T Consensus       210 ~~~g~Dvvid~~g~  223 (340)
T 3gms_A          210 NGIGADAAIDSIGG  223 (340)
T ss_dssp             TTSCEEEEEESSCH
T ss_pred             CCCCCcEEEECCCC
Confidence            11269999999985

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.85  E-value=9e-05  Score=62.96  Aligned_cols=100  Identities=14%  Similarity=0.178  Sum_probs=66.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|+++||+|+ +++|..+++.+...|++|+.++ ++++.+ ..+++      +..   ..+|.++.+  -.+. +.+.  
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~l------Ga~---~~~d~~~~~--~~~~-~~~~--  227 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLE-LAKEL------GAD---LVVNPLKED--AAKF-MKEK--  227 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHH-HHHHT------TCS---EEECTTTSC--HHHH-HHHH--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHC------CCC---EEecCCCcc--HHHH-HHHH--
Confidence            5789999999 7799999999999999999988 544443 33332      222   225776654  3222 2222  


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                       .+++|++|+++|..                          ...+..++.++.   +|+++.+++..
T Consensus       228 -~~~~d~vid~~g~~--------------------------~~~~~~~~~l~~---~G~~v~~g~~~  264 (339)
T 1rjw_A          228 -VGGVHAAVVTAVSK--------------------------PAFQSAYNSIRR---GGACVLVGLPP  264 (339)
T ss_dssp             -HSSEEEEEESSCCH--------------------------HHHHHHHHHEEE---EEEEEECCCCS
T ss_pred             -hCCCCEEEECCCCH--------------------------HHHHHHHHHhhc---CCEEEEecccC
Confidence             26799999999751                          023555566654   58999887753

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.84  E-value=8.7e-05  Score=62.65  Aligned_cols=79  Identities=8%  Similarity=0.050  Sum_probs=54.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|+++||+||+++||..+++.+...|++|++++ ++++++ ..+++      +..   ...|.++.+  ..+++.+..  
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~------Ga~---~~~~~~~~~--~~~~~~~~~--  205 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAA-HAKAL------GAW---ETIDYSHED--VAKRVLELT--  205 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHHHH------TCS---EEEETTTSC--HHHHHHHHT--
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHc------CCC---EEEeCCCcc--HHHHHHHHh--
Confidence            588999999999999999999999999999998 544443 33333      222   224666655  333332221  


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                      ....+|++++++|.
T Consensus       206 ~~~g~Dvvid~~g~  219 (325)
T 3jyn_A          206 DGKKCPVVYDGVGQ  219 (325)
T ss_dssp             TTCCEEEEEESSCG
T ss_pred             CCCCceEEEECCCh
Confidence            11269999999985

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.80  E-value=0.00014  Score=61.83  Aligned_cols=76  Identities=16%  Similarity=0.220  Sum_probs=52.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|+++||+||+++||..+++.+...|++|++++ +.++. +..+++      +... +  .|.. .+   +   .+++.+
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~~------ga~~-v--~~~~-~~---~---~~~v~~  221 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAAT-EFVKSV------GADI-V--LPLE-EG---W---AKAVRE  221 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHH------TCSE-E--EESS-TT---H---HHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHhc------CCcE-E--ecCc-hh---H---HHHHHH
Confidence            588999999999999999999999999999998 45554 444443      2222 2  3444 32   2   223333


Q ss_pred             Hh-C-CCCEEEEcCCC
Q 024517           83 IL-G-NLDAFVHCYTY   96 (266)
Q Consensus        83 ~~-g-~id~li~~ag~   96 (266)
                      .. + ++|++++++|.
T Consensus       222 ~~~~~g~Dvvid~~g~  237 (342)
T 4eye_A          222 ATGGAGVDMVVDPIGG  237 (342)
T ss_dssp             HTTTSCEEEEEESCC-
T ss_pred             HhCCCCceEEEECCch
Confidence            33 2 59999999985

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.77  E-value=0.00011  Score=62.36  Aligned_cols=102  Identities=14%  Similarity=0.198  Sum_probs=67.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|+++||+||+++||..+++.+...|++|++++ +.++++ ..+++      +..   ...|.++.+  ..+.+.+.. .
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~------ga~---~~~~~~~~~--~~~~~~~~~-~  214 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK-IAKEY------GAE---YLINASKED--ILRQVLKFT-N  214 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHT------TCS---EEEETTTSC--HHHHHHHHT-T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHc------CCc---EEEeCCCch--HHHHHHHHh-C
Confidence            588999999999999999999999999999998 444443 33333      222   224666655  333332211 1


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                       ..++|++++|+|..                           ..+.+++.++.   +|+++.++...
T Consensus       215 -~~g~D~vid~~g~~---------------------------~~~~~~~~l~~---~G~iv~~G~~~  250 (334)
T 3qwb_A          215 -GKGVDASFDSVGKD---------------------------TFEISLAALKR---KGVFVSFGNAS  250 (334)
T ss_dssp             -TSCEEEEEECCGGG---------------------------GHHHHHHHEEE---EEEEEECCCTT
T ss_pred             -CCCceEEEECCChH---------------------------HHHHHHHHhcc---CCEEEEEcCCC
Confidence             13699999999751                           13345555554   68999988754

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.76  E-value=6.6e-05  Score=62.69  Aligned_cols=93  Identities=18%  Similarity=0.127  Sum_probs=60.6

Q ss_pred             CCCcE-EEEecCCC-----------------c-hHHHHHHHHHHcCCeEEEEecccccHHH---------HHHHhcccCC
Q 024517            3 NQAKR-VLLTSDGD-----------------E-ISKNIAFHLAKRGCRLVLVGNERRLSSV---------AEKMMGSLKG   54 (266)
Q Consensus         3 l~~k~-vlItGa~~-----------------g-iG~~ia~~l~~~g~~v~~~~~~~~~~~~---------~~~~~~~~~~   54 (266)
                      ++||+ ||||+|+.                 | .|.++|++++++|+.|+++.++..+...         .+.+...-..
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~  113 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPA  113 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhcccccc
Confidence            46777 99998876                 6 9999999999999999998843333221         1111100001


Q ss_pred             CCCeEEEEEecCCCchHHHHHHHHHH------------------------------HHHhCCCCEEEEcCCCC
Q 024517           55 GQPVEVVGLDMEEDREGAFDEAVDKA------------------------------CQILGNLDAFVHCYTYE   97 (266)
Q Consensus        55 ~~~~~~~~~D~~~~~~~~v~~~~~~~------------------------------~~~~g~id~li~~ag~~   97 (266)
                      ...+..+.+|+....  +..+++.+.                              .+.+++.|++|.+|++.
T Consensus       114 ~~~~~~i~v~v~sa~--~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVs  184 (313)
T 1p9o_A          114 LSGLLSLEAEENALP--GFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVS  184 (313)
T ss_dssp             CCSEEEEEEETTTST--THHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCC
T ss_pred             ccccceeeeccccHH--HHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchh
Confidence            123456677777766  666655433                              23357899999999884

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.75  E-value=9.1e-05  Score=61.01  Aligned_cols=74  Identities=14%  Similarity=0.230  Sum_probs=54.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++ +.++.+++.+++...    ..+.  .+|+   +  ++.      
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~----~~~~--~~~~---~--~~~------  177 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY----GNIQ--AVSM---D--SIP------  177 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG----SCEE--EEEG---G--GCC------
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc----CCeE--EeeH---H--Hhc------
Confidence            467899999998 6899999999999999999998 566777777666431    1222  2343   2  111      


Q ss_pred             HHHhCCCCEEEEcCCC
Q 024517           81 CQILGNLDAFVHCYTY   96 (266)
Q Consensus        81 ~~~~g~id~li~~ag~   96 (266)
                        . +..|++|++++.
T Consensus       178 --~-~~~DivIn~t~~  190 (272)
T 1p77_A          178 --L-QTYDLVINATSA  190 (272)
T ss_dssp             --C-SCCSEEEECCCC
T ss_pred             --c-CCCCEEEECCCC
Confidence              0 479999999986

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.73  E-value=0.00011  Score=54.90  Aligned_cols=77  Identities=12%  Similarity=0.271  Sum_probs=54.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-c-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-E-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .++.++|.|+ |.+|+.+++.|.++|++|+++++ + ++.+...+..    +  ..+.++..|.++++  .++++     
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~----~--~~~~~i~gd~~~~~--~l~~a-----   67 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL----G--DNADVIPGDSNDSS--VLKKA-----   67 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH----C--TTCEEEESCTTSHH--HHHHH-----
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh----c--CCCeEEEcCCCCHH--HHHHc-----
Confidence            4677889986 88999999999999999999984 3 3333333222    1  35778889998866  43332     


Q ss_pred             HHhCCCCEEEEcCC
Q 024517           82 QILGNLDAFVHCYT   95 (266)
Q Consensus        82 ~~~g~id~li~~ag   95 (266)
                       ...+.|.+|.+.+
T Consensus        68 -~i~~ad~vi~~~~   80 (153)
T 1id1_A           68 -GIDRCRAILALSD   80 (153)
T ss_dssp             -TTTTCSEEEECSS
T ss_pred             -ChhhCCEEEEecC
Confidence             1246899998875

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.71  E-value=0.00046  Score=58.29  Aligned_cols=120  Identities=13%  Similarity=0.110  Sum_probs=70.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcC--CeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRG--CRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g--~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ..+++||||+|.+|..++..|+++|  ..|++++ +++  +.....+....   ....+ .. +++..  +..+++    
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~---~~~~v-~~-~~~t~--d~~~al----   74 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMD---TGAVV-RG-FLGQQ--QLEAAL----   74 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSC---SSCEE-EE-EESHH--HHHHHH----
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhccc---ccceE-EE-EeCCC--CHHHHc----
Confidence            3579999999999999999999998  6899988 544  33333343321   11111 11 22222  333333    


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccc
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGA  151 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~  151 (266)
                         ...|++|+++|....  +  ..+..   ..+..|+.....+.+.+.++    ..++.++++|.+...
T Consensus        75 ---~gaDvVi~~ag~~~~--~--g~~r~---dl~~~N~~~~~~i~~~i~~~----~p~~~viv~SNPv~~  130 (326)
T 1smk_A           75 ---TGMDLIIVPAGVPRK--P--GMTRD---DLFKINAGIVKTLCEGIAKC----CPRAIVNLISNPVNS  130 (326)
T ss_dssp             ---TTCSEEEECCCCCCC--S--SCCCS---HHHHHHHHHHHHHHHHHHHH----CTTSEEEECCSSHHH
T ss_pred             ---CCCCEEEEcCCcCCC--C--CCCHH---HHHHHHHHHHHHHHHHHHhh----CCCeEEEEECCchHH
Confidence               468999999986321  1  12222   33667777777776666554    224666666555443

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.65  E-value=0.0012  Score=55.66  Aligned_cols=122  Identities=19%  Similarity=0.200  Sum_probs=76.0

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCC-CCCeEEEEEecCCCchHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKG-GQPVEVVGLDMEEDREGAFDEA   76 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~v~~~   76 (266)
                      |+.+.+++.|+|+ |.+|.+++..|+..|.  +|++.| +.++++.....++...+- ...+.+...|   .+       
T Consensus         1 m~~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~~-------   69 (326)
T 3pqe_A            1 MNKHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---YE-------   69 (326)
T ss_dssp             -CCSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---GG-------
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---HH-------
Confidence            6666788999996 8999999999999997  899999 766666655556543221 1233332211   11       


Q ss_pred             HHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           77 VDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                            .+..-|++|.++|.. . .+  ..+..+   .+..|+    .+++.+.+.+.+..+++.++++|.+..
T Consensus        70 ------a~~~aDvVvi~ag~p-~-kp--G~~R~d---L~~~N~----~Iv~~i~~~I~~~~p~a~vlvvtNPvd  126 (326)
T 3pqe_A           70 ------DCKDADIVCICAGAN-Q-KP--GETRLE---LVEKNL----KIFKGIVSEVMASGFDGIFLVATNPVD  126 (326)
T ss_dssp             ------GGTTCSEEEECCSCC-C-CT--TCCHHH---HHHHHH----HHHHHHHHHHHHTTCCSEEEECSSSHH
T ss_pred             ------HhCCCCEEEEecccC-C-CC--CccHHH---HHHHHH----HHHHHHHHHHHHhcCCeEEEEcCChHH
Confidence                  124679999999862 1 21  233333   344444    345555555555444688888887644

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.64  E-value=0.00018  Score=52.36  Aligned_cols=74  Identities=11%  Similarity=0.220  Sum_probs=50.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +.+++|+|+ |.+|..+++.|.++|++|++++ +++..+.    +.+.    ..+.++..|.++.+  .+.+      ..
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~----~~~~----~~~~~~~~d~~~~~--~l~~------~~   66 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKK----ASAE----IDALVINGDCTKIK--TLED------AG   66 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHHH----CSSEEEESCTTSHH--HHHH------TT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH----HHHh----cCcEEEEcCCCCHH--HHHH------cC
Confidence            467899987 8899999999999999999998 4443333    2221    13456667877655  3221      11


Q ss_pred             hCCCCEEEEcCC
Q 024517           84 LGNLDAFVHCYT   95 (266)
Q Consensus        84 ~g~id~li~~ag   95 (266)
                      ..+.|++|.+.+
T Consensus        67 ~~~~d~vi~~~~   78 (140)
T 1lss_A           67 IEDADMYIAVTG   78 (140)
T ss_dssp             TTTCSEEEECCS
T ss_pred             cccCCEEEEeeC
Confidence            346899999974

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.61  E-value=0.00047  Score=58.71  Aligned_cols=101  Identities=16%  Similarity=0.150  Sum_probs=65.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|+++||+|+ +++|..+++.+...|+ +|+++++.+...+..+++      +...   ..|..+.+  -    .+++.+
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~------Ga~~---~~~~~~~~--~----~~~v~~  230 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV------GADY---VINPFEED--V----VKEVMD  230 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH------TCSE---EECTTTSC--H----HHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh------CCCE---EECCCCcC--H----HHHHHH
Confidence            5789999999 9999999999999999 999988433323333333      2221   24665544  2    223333


Q ss_pred             Hh--CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           83 IL--GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        83 ~~--g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                      ..  ..+|++|+++|..                          ...+.+++.++.   +|+++.+++..
T Consensus       231 ~~~g~g~D~vid~~g~~--------------------------~~~~~~~~~l~~---~G~iv~~g~~~  270 (348)
T 2d8a_A          231 ITDGNGVDVFLEFSGAP--------------------------KALEQGLQAVTP---AGRVSLLGLYP  270 (348)
T ss_dssp             HTTTSCEEEEEECSCCH--------------------------HHHHHHHHHEEE---EEEEEECCCCS
T ss_pred             HcCCCCCCEEEECCCCH--------------------------HHHHHHHHHHhc---CCEEEEEccCC
Confidence            22  2599999999741                          123555666654   68999988753

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.59  E-value=0.00015  Score=62.33  Aligned_cols=98  Identities=10%  Similarity=0.151  Sum_probs=64.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|+++||+|+ ++||..+++.+...|++|++++ +.++.+...+++      +..   ...|..+.+  .++       +
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l------Ga~---~v~~~~~~~--~~~-------~  247 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF------GAD---SFLVSRDQE--QMQ-------A  247 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS------CCS---EEEETTCHH--HHH-------H
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------CCc---eEEeccCHH--HHH-------H
Confidence            6889999996 8999999999999999999888 555544433232      222   124555432  322       2


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                      ..+.+|++|+++|.. .                         .++..++.++.   +|+++.+++..
T Consensus       248 ~~~~~D~vid~~g~~-~-------------------------~~~~~~~~l~~---~G~iv~~g~~~  285 (366)
T 1yqd_A          248 AAGTLDGIIDTVSAV-H-------------------------PLLPLFGLLKS---HGKLILVGAPE  285 (366)
T ss_dssp             TTTCEEEEEECCSSC-C-------------------------CSHHHHHHEEE---EEEEEECCCCS
T ss_pred             hhCCCCEEEECCCcH-H-------------------------HHHHHHHHHhc---CCEEEEEccCC
Confidence            235799999999862 1                         12344555544   58999998753

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.59  E-value=0.00011  Score=63.14  Aligned_cols=74  Identities=15%  Similarity=0.235  Sum_probs=52.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +-+..+|+|.|+ |++|+.+++.|.+ .++|.+.+ +.+++++    +.      ..+..+.+|++|.+  ++.++++  
T Consensus        13 ~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~----~~------~~~~~~~~d~~d~~--~l~~~~~--   76 (365)
T 3abi_A           13 EGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEK----VK------EFATPLKVDASNFD--KLVEVMK--   76 (365)
T ss_dssp             ---CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHH----HT------TTSEEEECCTTCHH--HHHHHHT--
T ss_pred             cCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHH----Hh------ccCCcEEEecCCHH--HHHHHHh--
Confidence            334457999998 9999999998865 57888888 4444333    22      34567788999877  7666663  


Q ss_pred             HHHhCCCCEEEEcCCC
Q 024517           81 CQILGNLDAFVHCYTY   96 (266)
Q Consensus        81 ~~~~g~id~li~~ag~   96 (266)
                           +.|+||++++.
T Consensus        77 -----~~DvVi~~~p~   87 (365)
T 3abi_A           77 -----EFELVIGALPG   87 (365)
T ss_dssp             -----TCSEEEECCCG
T ss_pred             -----CCCEEEEecCC
Confidence                 57999999865

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.58  E-value=0.00016  Score=64.01  Aligned_cols=106  Identities=15%  Similarity=0.193  Sum_probs=70.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCC-----------chH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEED-----------REG   71 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----------~~~   71 (266)
                      .|++|||+|++|+||...++.+...|++|++++ +.++++ .++++      |....   +|..+.           +..
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~-~~~~l------Ga~~v---i~~~~~d~~~~~~~~~~~~~  297 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAE-ICRAM------GAEAI---IDRNAEGYRFWKDENTQDPK  297 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHH------TCCEE---EETTTTTCCSEEETTEECHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHH-HHHhh------CCcEE---EecCcCcccccccccccchH
Confidence            578999999999999999999999999999888 444443 33443      22221   233221           111


Q ss_pred             HHHHHHHHHHHHhC--CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           72 AFDEAVDKACQILG--NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        72 ~v~~~~~~~~~~~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                      +++++.+++.+..+  .+|+++.++|..                           .++.++..++.   +|+++.+++..
T Consensus       298 ~~~~~~~~i~~~t~g~g~Dvvid~~G~~---------------------------~~~~~~~~l~~---~G~iv~~G~~~  347 (456)
T 3krt_A          298 EWKRFGKRIRELTGGEDIDIVFEHPGRE---------------------------TFGASVFVTRK---GGTITTCASTS  347 (456)
T ss_dssp             HHHHHHHHHHHHHTSCCEEEEEECSCHH---------------------------HHHHHHHHEEE---EEEEEESCCTT
T ss_pred             HHHHHHHHHHHHhCCCCCcEEEEcCCch---------------------------hHHHHHHHhhC---CcEEEEEecCC
Confidence            55666677766553  699999998741                           12344555544   68999988754

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.56  E-value=0.0003  Score=58.15  Aligned_cols=73  Identities=11%  Similarity=0.137  Sum_probs=53.4

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++ +.++.+++++++...    ..+...  ++.+..          
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~----~~~~~~--~~~~l~----------  185 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAY----GEVKAQ--AFEQLK----------  185 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGG----SCEEEE--EGGGCC----------
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhcc----CCeeEe--eHHHhc----------
Confidence            467999999998 5899999999999997 899988 666777777776532    123332  332211          


Q ss_pred             HHHHhCCCCEEEEcCCC
Q 024517           80 ACQILGNLDAFVHCYTY   96 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~   96 (266)
                           ...|+|||+.+.
T Consensus       186 -----~~aDiIInaTp~  197 (281)
T 3o8q_A          186 -----QSYDVIINSTSA  197 (281)
T ss_dssp             -----SCEEEEEECSCC
T ss_pred             -----CCCCEEEEcCcC
Confidence                 368999999765

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.47  E-value=0.00067  Score=57.84  Aligned_cols=80  Identities=19%  Similarity=0.221  Sum_probs=50.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCC-CchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEE-DREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~v~~~~~~~~   81 (266)
                      .|+++||+|+ +++|...++.+...|++|++++ +.+++ +..+++      +..   ...|.++ .+  ..+++.+...
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~~~l------Ga~---~~~~~~~~~~--~~~~i~~~~~  234 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRL-EVAKNC------GAD---VTLVVDPAKE--EESSIIERIR  234 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHT------TCS---EEEECCTTTS--CHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHH-HHHHHh------CCC---EEEcCccccc--HHHHHHHHhc
Confidence            5789999997 8999999998888999988887 44433 333332      223   2245553 33  2223222211


Q ss_pred             H-HhCCCCEEEEcCCC
Q 024517           82 Q-ILGNLDAFVHCYTY   96 (266)
Q Consensus        82 ~-~~g~id~li~~ag~   96 (266)
                      . ..+++|++|+++|.
T Consensus       235 ~~~g~g~D~vid~~g~  250 (352)
T 1e3j_A          235 SAIGDLPNVTIDCSGN  250 (352)
T ss_dssp             HHSSSCCSEEEECSCC
T ss_pred             cccCCCCCEEEECCCC
Confidence            0 01369999999975

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.45  E-value=0.0004  Score=59.03  Aligned_cols=77  Identities=13%  Similarity=0.181  Sum_probs=51.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      .|+++||+||+++||..+++.+...|++|+++.+.++++ ..+++      +..  .  +| .+.+   ..+.+.+... 
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~~~~~~~~-~~~~l------Ga~--~--i~-~~~~---~~~~~~~~~~-  213 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFATARGSDLE-YVRDL------GAT--P--ID-ASRE---PEDYAAEHTA-  213 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECHHHHH-HHHHH------TSE--E--EE-TTSC---HHHHHHHHHT-
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCHHHHH-HHHHc------CCC--E--ec-cCCC---HHHHHHHHhc-
Confidence            588999999999999999999999999998885444333 33333      222  2  56 4444   2222322211 


Q ss_pred             hCCCCEEEEcCCC
Q 024517           84 LGNLDAFVHCYTY   96 (266)
Q Consensus        84 ~g~id~li~~ag~   96 (266)
                      ...+|++++++|.
T Consensus       214 ~~g~D~vid~~g~  226 (343)
T 3gaz_A          214 GQGFDLVYDTLGG  226 (343)
T ss_dssp             TSCEEEEEESSCT
T ss_pred             CCCceEEEECCCc
Confidence            1369999999874

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.45  E-value=0.00057  Score=58.82  Aligned_cols=76  Identities=13%  Similarity=0.132  Sum_probs=52.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      .|+++||+||+++||..+++.+...|++|+.+++.++.+ ..+++      +..   ...|.++.+  -.++    +.+ 
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~~~~-~~~~l------Ga~---~v~~~~~~~--~~~~----~~~-  245 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASE-LVRKL------GAD---DVIDYKSGS--VEEQ----LKS-  245 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGGGHH-HHHHT------TCS---EEEETTSSC--HHHH----HHT-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChHHHH-HHHHc------CCC---EEEECCchH--HHHH----Hhh-
Confidence            578999999999999999999999999998877544433 33332      222   124666654  3322    222 


Q ss_pred             hCCCCEEEEcCCC
Q 024517           84 LGNLDAFVHCYTY   96 (266)
Q Consensus        84 ~g~id~li~~ag~   96 (266)
                      .+++|++|+++|.
T Consensus       246 ~~g~D~vid~~g~  258 (375)
T 2vn8_A          246 LKPFDFILDNVGG  258 (375)
T ss_dssp             SCCBSEEEESSCT
T ss_pred             cCCCCEEEECCCC
Confidence            2579999999985

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.43  E-value=0.00033  Score=58.43  Aligned_cols=72  Identities=14%  Similarity=0.171  Sum_probs=50.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCC-CchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEE-DREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~v~~~~~~~~   81 (266)
                      .|+++||+|+++++|..+++.+...|++|+.++ ++++.+.. +++      +...   ..|..+ .+   .   .+++ 
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~------ga~~---~~~~~~~~~---~---~~~~-  187 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP-LAL------GAEE---AATYAEVPE---R---AKAW-  187 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH-HHT------TCSE---EEEGGGHHH---H---HHHT-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc------CCCE---EEECCcchh---H---HHHh-
Confidence            578999999999999999999999999999998 55555443 332      2221   235543 22   2   2222 


Q ss_pred             HHhCCCCEEEEcCCC
Q 024517           82 QILGNLDAFVHCYTY   96 (266)
Q Consensus        82 ~~~g~id~li~~ag~   96 (266)
                         +++|++|+ +|.
T Consensus       188 ---~~~d~vid-~g~  198 (302)
T 1iz0_A          188 ---GGLDLVLE-VRG  198 (302)
T ss_dssp             ---TSEEEEEE-CSC
T ss_pred             ---cCceEEEE-CCH
Confidence               57999999 874

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.42  E-value=0.0036  Score=52.25  Aligned_cols=116  Identities=11%  Similarity=0.016  Sum_probs=66.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEec--cc-ccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC--RLVLVGN--ER-RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~--~v~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++||||+|.+|.+++..|+.+|.  ++++.+.  .+ +++.....+.....-..++.+.. +  +.+      .     
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~------a-----   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYE------D-----   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGG------G-----
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHH------H-----
Confidence            689999999999999999998876  5777775  32 22222333332211112333332 2  222      1     


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                        +...|++|+.+|...  .+  ..+..   ..+..|+.....+.+.+    .+...++.++++|.+.
T Consensus        68 --~~~aDvVi~~ag~~~--~~--g~~r~---dl~~~N~~i~~~i~~~i----~~~~p~~~viv~SNPv  122 (303)
T 1o6z_A           68 --TAGSDVVVITAGIPR--QP--GQTRI---DLAGDNAPIMEDIQSSL----DEHNDDYISLTTSNPV  122 (303)
T ss_dssp             --GTTCSEEEECCCCCC--CT--TCCHH---HHHHHHHHHHHHHHHHH----HTTCSCCEEEECCSSH
T ss_pred             --hCCCCEEEEcCCCCC--CC--CCCHH---HHHHHHHHHHHHHHHHH----HHHCCCcEEEEeCChH
Confidence              246899999998621  11  23333   34666766666665555    4333246666665544

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.42  E-value=0.00034  Score=56.78  Aligned_cols=81  Identities=15%  Similarity=0.231  Sum_probs=56.3

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cc-------------------cccHHHHHHHhcccCCCCCeEEE
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NE-------------------RRLSSVAEKMMGSLKGGQPVEVV   61 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~-------------------~~~~~~~~~~~~~~~~~~~~~~~   61 (266)
                      +++++|+|.|+ ||+|..+++.|+..|. ++.++| +.                   .+.+..++.+.+..+. .++..+
T Consensus        29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~-~~v~~~  106 (249)
T 1jw9_B           29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPH-IAITPV  106 (249)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT-SEEEEE
T ss_pred             HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCC-cEEEEE
Confidence            45788999997 5799999999999998 888888 54                   5667777777665432 344554


Q ss_pred             EEecCCCchHHHHHHHHHHHHHhCCCCEEEEcCC
Q 024517           62 GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYT   95 (266)
Q Consensus        62 ~~D~~~~~~~~v~~~~~~~~~~~g~id~li~~ag   95 (266)
                      ..++++ +  .+.+++       ...|++|.+..
T Consensus       107 ~~~~~~-~--~~~~~~-------~~~DvVi~~~d  130 (249)
T 1jw9_B          107 NALLDD-A--ELAALI-------AEHDLVLDCTD  130 (249)
T ss_dssp             CSCCCH-H--HHHHHH-------HTSSEEEECCS
T ss_pred             eccCCH-h--HHHHHH-------hCCCEEEEeCC
Confidence            444442 2  233332       36899999864

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.42  E-value=0.0012  Score=55.66  Aligned_cols=121  Identities=16%  Similarity=0.195  Sum_probs=70.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      +.+++++.|+|+ |++|.+++..|+..|.  ++++.| +.++++.....+....+-...+.+.. +  +.+         
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~-~--~~~---------   72 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYS-A--EYS---------   72 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG---------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEE-C--cHH---------
Confidence            346778999996 8999999999999987  899999 76667766666654321001223221 1  111         


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                          .+..-|++|.++|.. . .+  .++   -...++.|.    -+++.+.+.+.+..+++.++++|.+..
T Consensus        73 ----a~~~aDiVvi~ag~~-~-kp--G~t---R~dL~~~N~----~I~~~i~~~i~~~~p~a~ilvvtNPvd  129 (326)
T 3vku_A           73 ----DAKDADLVVITAGAP-Q-KP--GET---RLDLVNKNL----KILKSIVDPIVDSGFNGIFLVAANPVD  129 (326)
T ss_dssp             ----GGTTCSEEEECCCCC---------------------------CHHHHHHHHHTTTCCSEEEECSSSHH
T ss_pred             ----HhcCCCEEEECCCCC-C-CC--Cch---HHHHHHHHH----HHHHHHHHHHHhcCCceEEEEccCchH
Confidence                124689999999862 1 11  122   233344444    345566666665544688888887543

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.41  E-value=0.00018  Score=59.96  Aligned_cols=75  Identities=13%  Similarity=0.204  Sum_probs=51.7

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++ +.++.+++++++...    .. ..  .++   +  +       
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~----~~-~~--~~~---~--~-------  197 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDER----RS-AY--FSL---A--E-------  197 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSS----SC-CE--ECH---H--H-------
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhc----cC-ce--eeH---H--H-------
Confidence            467899999998 6899999999999998 899988 556666666554211    00 11  111   2  2       


Q ss_pred             HHHHhCCCCEEEEcCCC
Q 024517           80 ACQILGNLDAFVHCYTY   96 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~   96 (266)
                      +.+.....|++|++.+.
T Consensus       198 ~~~~~~~aDivIn~t~~  214 (297)
T 2egg_A          198 AETRLAEYDIIINTTSV  214 (297)
T ss_dssp             HHHTGGGCSEEEECSCT
T ss_pred             HHhhhccCCEEEECCCC
Confidence            22233578999999876

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.39  E-value=0.0005  Score=58.51  Aligned_cols=77  Identities=13%  Similarity=0.201  Sum_probs=51.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|+++||+||++++|..+++.+...|++|+.++ +.++++ ..+++      +...   ..|..+ +   ..+.+.+.  
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~~l------Ga~~---vi~~~~-~---~~~~~~~~--  213 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIE-WTKKM------GADI---VLNHKE-S---LLNQFKTQ--  213 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHH-HHHHH------TCSE---EECTTS-C---HHHHHHHH--
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHhc------CCcE---EEECCc-c---HHHHHHHh--
Confidence            589999999999999999999999999999998 444433 33333      2221   134432 2   22222222  


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                      ..+.+|++++++|.
T Consensus       214 ~~~g~Dvv~d~~g~  227 (346)
T 3fbg_A          214 GIELVDYVFCTFNT  227 (346)
T ss_dssp             TCCCEEEEEESSCH
T ss_pred             CCCCccEEEECCCc
Confidence            22469999999875

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.38  E-value=0.001  Score=56.93  Aligned_cols=80  Identities=16%  Similarity=0.184  Sum_probs=53.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCe-EEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCR-LVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~-v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .|+++||+|+ |++|...++.....|++ |++++ ++++. +..+++ .     ..+..+..|-.+.+  +   +.+++.
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~l-~-----~~~~~~~~~~~~~~--~---~~~~v~  245 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRL-KFAKEI-C-----PEVVTHKVERLSAE--E---SAKKIV  245 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHH-HHHHHH-C-----TTCEEEECCSCCHH--H---HHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHh-c-----hhcccccccccchH--H---HHHHHH
Confidence            5789999998 99999999988889997 88888 44444 344444 2     24444444422222  3   444444


Q ss_pred             HHh--CCCCEEEEcCCC
Q 024517           82 QIL--GNLDAFVHCYTY   96 (266)
Q Consensus        82 ~~~--g~id~li~~ag~   96 (266)
                      +..  .++|+++.++|.
T Consensus       246 ~~t~g~g~Dvvid~~g~  262 (363)
T 3m6i_A          246 ESFGGIEPAVALECTGV  262 (363)
T ss_dssp             HHTSSCCCSEEEECSCC
T ss_pred             HHhCCCCCCEEEECCCC
Confidence            444  269999999975

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.36  E-value=0.00068  Score=58.11  Aligned_cols=75  Identities=16%  Similarity=0.194  Sum_probs=51.3

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +++++++|+|+ |++|+++++.+...|++|++++ +.++++...+...      ..+..   +..+.+  ++.+.+    
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~------~~~~~---~~~~~~--~~~~~~----  228 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG------SRVEL---LYSNSA--EIETAV----  228 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG------GGSEE---EECCHH--HHHHHH----
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC------ceeEe---eeCCHH--HHHHHH----
Confidence            56789999999 8999999999999999999998 5555555443332      12211   122222  332222    


Q ss_pred             HHhCCCCEEEEcCCC
Q 024517           82 QILGNLDAFVHCYTY   96 (266)
Q Consensus        82 ~~~g~id~li~~ag~   96 (266)
                         ...|++|++++.
T Consensus       229 ---~~~DvVI~~~~~  240 (361)
T 1pjc_A          229 ---AEADLLIGAVLV  240 (361)
T ss_dssp             ---HTCSEEEECCCC
T ss_pred             ---cCCCEEEECCCc
Confidence               268999999976

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.35  E-value=0.0036  Score=52.44  Aligned_cols=150  Identities=15%  Similarity=0.161  Sum_probs=85.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEec--cc-ccHHHHHHHhcccC-CCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC--RLVLVGN--ER-RLSSVAEKMMGSLK-GGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~--~v~~~~~--~~-~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++||||+|.+|..++..|+.+|.  .+++++.  .+ +++.....+..... .+.++.+...|  +    ++.+.+   
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~--d----~l~~al---   72 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES--D----ENLRII---   72 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE--T----TCGGGG---
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC--c----chHHHh---
Confidence            589999999999999999998885  5777775  32 23322223322111 01233332211  1    111122   


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc------C
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER------G  154 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~------~  154 (266)
                          ...|++||.||...  .+  ..+.   ...+..|+.....+++.+.++    . ++.++++|.+.....      .
T Consensus        73 ----~gaD~Vi~~Ag~~~--~~--g~~r---~dl~~~N~~i~~~i~~~i~~~----~-~~~vlv~SNPv~~~t~~~~k~~  136 (313)
T 1hye_A           73 ----DESDVVIITSGVPR--KE--GMSR---MDLAKTNAKIVGKYAKKIAEI----C-DTKIFVITNPVDVMTYKALVDS  136 (313)
T ss_dssp             ----TTCSEEEECCSCCC--CT--TCCH---HHHHHHHHHHHHHHHHHHHHH----C-CCEEEECSSSHHHHHHHHHHHH
T ss_pred             ----CCCCEEEECCCCCC--CC--CCcH---HHHHHHHHHHHHHHHHHHHHh----C-CeEEEEecCcHHHHHHHHHHhh
Confidence                46899999998621  11  2233   344777887777777776554    2 367777776554211      1


Q ss_pred             CCCCchhhHH-hHHHHHHHHHHHHHHhC
Q 024517          155 LYPGAAAYGA-CAASIHQLVRTAAMEIG  181 (266)
Q Consensus       155 ~~~~~~~y~~-sK~a~~~~~~~la~e~~  181 (266)
                      .+|....++. +.---..+...+++.++
T Consensus       137 ~~p~~rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          137 KFERNQVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             CCCTTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred             CcChhcEEEeCccHHHHHHHHHHHHHhC
Confidence            1344445565 44445566667777664

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.33  E-value=0.00061  Score=58.77  Aligned_cols=76  Identities=12%  Similarity=0.118  Sum_probs=52.4

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      .+.+++++|+|+ |+||+.+++.+...|++|++++ +.++++...+.+      +..+   .++..+.+  ++.+.+   
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~------g~~~---~~~~~~~~--~l~~~l---  229 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF------CGRI---HTRYSSAY--ELEGAV---  229 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT------TTSS---EEEECCHH--HHHHHH---
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc------CCee---EeccCCHH--HHHHHH---
Confidence            367999999998 8999999999999999999998 555444433322      1232   12333333  444333   


Q ss_pred             HHHhCCCCEEEEcCCC
Q 024517           81 CQILGNLDAFVHCYTY   96 (266)
Q Consensus        81 ~~~~g~id~li~~ag~   96 (266)
                          ...|++|++++.
T Consensus       230 ----~~aDvVi~~~~~  241 (377)
T 2vhw_A          230 ----KRADLVIGAVLV  241 (377)
T ss_dssp             ----HHCSEEEECCCC
T ss_pred             ----cCCCEEEECCCc
Confidence                257999999875

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.32  E-value=0.00024  Score=53.09  Aligned_cols=77  Identities=17%  Similarity=0.112  Sum_probs=51.9

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +.+++++|+|+ |.+|..+++.|.+.|++|++++ ++++.+.    +...    ....++..|.++.+  .+.+.     
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~----~~~~----~g~~~~~~d~~~~~--~l~~~-----   80 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHR----LNSE----FSGFTVVGDAAEFE--TLKEC-----   80 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGG----SCTT----CCSEEEESCTTSHH--HHHTT-----
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH----HHhc----CCCcEEEecCCCHH--HHHHc-----
Confidence            45788999986 8899999999999999999998 5554432    1101    23445666766543  32211     


Q ss_pred             HHhCCCCEEEEcCCC
Q 024517           82 QILGNLDAFVHCYTY   96 (266)
Q Consensus        82 ~~~g~id~li~~ag~   96 (266)
                       ...+.|++|.+.+.
T Consensus        81 -~~~~ad~Vi~~~~~   94 (155)
T 2g1u_A           81 -GMEKADMVFAFTND   94 (155)
T ss_dssp             -TGGGCSEEEECSSC
T ss_pred             -CcccCCEEEEEeCC
Confidence             12468999999753

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.30  E-value=0.00076  Score=55.87  Aligned_cols=89  Identities=15%  Similarity=0.210  Sum_probs=61.3

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cc------------------cccHHHHHHHhcccCCCCCeEEEE
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NE------------------RRLSSVAEKMMGSLKGGQPVEVVG   62 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~------------------~~~~~~~~~~~~~~~~~~~~~~~~   62 (266)
                      |++++|+|.|++ |+|..+++.|+..|. ++.++| +.                  .+.+...+.+++..+. .++..+.
T Consensus        34 L~~~~VlVvGaG-GlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~-v~v~~~~  111 (292)
T 3h8v_A           34 IRTFAVAIVGVG-GVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPD-VLFEVHN  111 (292)
T ss_dssp             GGGCEEEEECCS-HHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTT-SEEEEEC
T ss_pred             HhCCeEEEECcC-HHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCC-cEEEEec
Confidence            567889999875 599999999999998 888888 44                  4555666667665542 5666666


Q ss_pred             EecCCCchHHHHHHHHHHHHH----hCCCCEEEEcCC
Q 024517           63 LDMEEDREGAFDEAVDKACQI----LGNLDAFVHCYT   95 (266)
Q Consensus        63 ~D~~~~~~~~v~~~~~~~~~~----~g~id~li~~ag   95 (266)
                      .++++.+  .+..+++.+...    ....|+||.+..
T Consensus       112 ~~l~~~~--~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          112 YNITTVE--NFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             CCTTSHH--HHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             ccCCcHH--HHHHHhhhhcccccccCCCCCEEEECCc
Confidence            6666544  555555443221    136899998753

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.27  E-value=0.00051  Score=50.41  Aligned_cols=73  Identities=14%  Similarity=0.136  Sum_probs=51.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      +.++|.|. |.+|..+++.|.++|++|++++ ++++.++    +.+     ..+.++..|.++++  .++++      ..
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~----~~~-----~g~~~i~gd~~~~~--~l~~a------~i   69 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDE----LRE-----RGVRAVLGNAANEE--IMQLA------HL   69 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHH----HHH-----TTCEEEESCTTSHH--HHHHT------TG
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHH----HHH-----cCCCEEECCCCCHH--HHHhc------Cc
Confidence            46788887 6699999999999999999999 5544433    322     24567888998876  43332      12


Q ss_pred             CCCCEEEEcCCC
Q 024517           85 GNLDAFVHCYTY   96 (266)
Q Consensus        85 g~id~li~~ag~   96 (266)
                      .+.|++|.+.+.
T Consensus        70 ~~ad~vi~~~~~   81 (140)
T 3fwz_A           70 ECAKWLILTIPN   81 (140)
T ss_dssp             GGCSEEEECCSC
T ss_pred             ccCCEEEEECCC
Confidence            367999988653

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.25  E-value=0.0037  Score=52.42  Aligned_cols=123  Identities=22%  Similarity=0.269  Sum_probs=73.0

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-c--ccccHHHHHHHhcccCC-CCCeEEEEEecCCCchHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-N--ERRLSSVAEKMMGSLKG-GQPVEVVGLDMEEDREGAFDE   75 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~--~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~v~~   75 (266)
                      |+++.+++.|+|+ |.+|..++..|+.+|. +|++.+ +  .++.+.....+....+- .....+...  ++.+      
T Consensus         4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d~~------   74 (315)
T 3tl2_A            4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SDYA------   74 (315)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SCGG------
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CCHH------
Confidence            7777889999997 8999999999999999 999999 5  33444333333321100 011122211  1111      


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           76 AVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        76 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                             .+...|++|.++|.. . ++  ..+..+   .+..|.    .+++.+.+.+.+..+++.++++|.+..
T Consensus        75 -------a~~~aDvVIiaag~p-~-kp--g~~R~d---l~~~N~----~i~~~i~~~i~~~~p~a~vlvvsNPvd  131 (315)
T 3tl2_A           75 -------DTADSDVVVITAGIA-R-KP--GMSRDD---LVATNS----KIMKSITRDIAKHSPNAIIVVLTNPVD  131 (315)
T ss_dssp             -------GGTTCSEEEECCSCC-C-CT--TCCHHH---HHHHHH----HHHHHHHHHHHHHCTTCEEEECCSSHH
T ss_pred             -------HhCCCCEEEEeCCCC-C-CC--CCCHHH---HHHHHH----HHHHHHHHHHHHhCCCeEEEECCChHH
Confidence                   224789999999872 1 21  234433   344444    345555555554444688888887543

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.20  E-value=0.002  Score=54.53  Aligned_cols=100  Identities=12%  Similarity=0.159  Sum_probs=65.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|+++||+|+ +++|...++.+...|++|+.++ +.++.+ ..+++      +...   ..|..+.+  ..+.+    .+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~~l------Ga~~---~i~~~~~~--~~~~~----~~  228 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLN-LARRL------GAEV---AVNARDTD--PAAWL----QK  228 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHT------TCSE---EEETTTSC--HHHHH----HH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHHc------CCCE---EEeCCCcC--HHHHH----HH
Confidence            5789999997 8899999999989999999998 444433 33333      2222   24666655  33333    22


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                      ..+++|+++.++|..                          ..++.+++.++.   +|+++.++...
T Consensus       229 ~~g~~d~vid~~g~~--------------------------~~~~~~~~~l~~---~G~iv~~G~~~  266 (340)
T 3s2e_A          229 EIGGAHGVLVTAVSP--------------------------KAFSQAIGMVRR---GGTIALNGLPP  266 (340)
T ss_dssp             HHSSEEEEEESSCCH--------------------------HHHHHHHHHEEE---EEEEEECSCCS
T ss_pred             hCCCCCEEEEeCCCH--------------------------HHHHHHHHHhcc---CCEEEEeCCCC
Confidence            346899999998741                          123445555554   68999887643

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.19  E-value=0.0042  Score=52.20  Aligned_cols=119  Identities=16%  Similarity=0.153  Sum_probs=67.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +..++.|+|+ |.+|..++..|+.+|.  +|++.| +.++++.....+....+-...+.+..   ++.+           
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~---~~~~-----------   70 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GDYS-----------   70 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE---CCHH-----------
Confidence            3457899998 8999999999999987  899999 77777766666654321111222221   1211           


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                        .+..-|++|.++|.. . .+  ..+..   ..+..|+.-    ++.+.+.+.+..+++.++++|....
T Consensus        71 --a~~~aDvVii~~g~p-~-k~--g~~r~---dl~~~n~~i----~~~i~~~i~~~~p~a~viv~tNPv~  127 (318)
T 1y6j_A           71 --DVKDCDVIVVTAGAN-R-KP--GETRL---DLAKKNVMI----AKEVTQNIMKYYNHGVILVVSNPVD  127 (318)
T ss_dssp             --GGTTCSEEEECCCC----------CHH---HHHHHHHHH----HHHHHHHHHHHCCSCEEEECSSSHH
T ss_pred             --HhCCCCEEEEcCCCC-C-CC--CcCHH---HHHHhhHHH----HHHHHHHHHHhCCCcEEEEecCcHH
Confidence              134689999999862 1 11  12332   234444444    4444444444333678888766543

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.19  E-value=0.0043  Score=52.62  Aligned_cols=120  Identities=16%  Similarity=0.155  Sum_probs=70.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++++++.|+|++|.+|..++..++.+|.  +|+++| +.++++.....+....-...++.+     +  .  +..+.+  
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-----t--~--d~~~al--   74 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-----T--S--DIKEAL--   74 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-----E--S--CHHHHH--
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-----c--C--CHHHHh--
Confidence            3578899999999999999999999984  899999 666666555555432111112221     1  1  112222  


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCe-EEEEeccc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGS-IVFLTSII  149 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~-iv~iss~~  149 (266)
                           ..-|++|.++|.. . .+  ..+.   ...+..|+.    +++.+.+.+.+...++. ++++|...
T Consensus        75 -----~dADvVvitaG~p-~-kp--G~~R---~dLl~~N~~----I~~~i~~~i~~~~p~a~~vlvvsNPv  129 (343)
T 3fi9_A           75 -----TDAKYIVSSGGAP-R-KE--GMTR---EDLLKGNAE----IAAQLGKDIKSYCPDCKHVIIIFNPA  129 (343)
T ss_dssp             -----TTEEEEEECCC-----------CH---HHHHHHHHH----HHHHHHHHHHHHCTTCCEEEECSSSH
T ss_pred             -----CCCCEEEEccCCC-C-CC--CCCH---HHHHHHHHH----HHHHHHHHHHHhccCcEEEEEecCch
Confidence                 3679999999862 1 11  2233   333444443    45555555555443574 77887654

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.18  E-value=0.00043  Score=53.18  Aligned_cols=76  Identities=13%  Similarity=0.104  Sum_probs=51.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHc-CCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKR-GCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~-g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +.+++++|.|+ |.+|..+++.|.++ |++|++++ ++++.+.    +.+     ..+.++..|.++.+  .+.++    
T Consensus        37 ~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~----~~~-----~g~~~~~gd~~~~~--~l~~~----  100 (183)
T 3c85_A           37 PGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQ----HRS-----EGRNVISGDATDPD--FWERI----  100 (183)
T ss_dssp             CTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHH----HHH-----TTCCEEECCTTCHH--HHHTB----
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHH----HHH-----CCCCEEEcCCCCHH--HHHhc----
Confidence            34667889985 88999999999999 99999998 5444333    322     13456667887755  33321    


Q ss_pred             HHHhCCCCEEEEcCC
Q 024517           81 CQILGNLDAFVHCYT   95 (266)
Q Consensus        81 ~~~~g~id~li~~ag   95 (266)
                       ....+.|++|.+.+
T Consensus       101 -~~~~~ad~vi~~~~  114 (183)
T 3c85_A          101 -LDTGHVKLVLLAMP  114 (183)
T ss_dssp             -CSCCCCCEEEECCS
T ss_pred             -cCCCCCCEEEEeCC
Confidence             01246899998865

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.17  E-value=0.00095  Score=56.66  Aligned_cols=99  Identities=18%  Similarity=0.159  Sum_probs=63.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .|+++||+|+ +++|..+++.+...|+ +|+.++ +.++.+. .+++         . -...|..+.+   +.+.+.++.
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~-~~~l---------a-~~v~~~~~~~---~~~~~~~~~  228 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAF-ARPY---------A-DRLVNPLEED---LLEVVRRVT  228 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGG-GTTT---------C-SEEECTTTSC---HHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHh---------H-HhccCcCccC---HHHHHHHhc
Confidence            5789999999 9999999999888999 899988 4333221 1111         1 1224555543   333333332


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                        .+++|++|.++|..                          ...+..++.++.   +|+++.++..
T Consensus       229 --~~g~D~vid~~g~~--------------------------~~~~~~~~~l~~---~G~iv~~g~~  264 (343)
T 2dq4_A          229 --GSGVEVLLEFSGNE--------------------------AAIHQGLMALIP---GGEARILGIP  264 (343)
T ss_dssp             --SSCEEEEEECSCCH--------------------------HHHHHHHHHEEE---EEEEEECCCC
T ss_pred             --CCCCCEEEECCCCH--------------------------HHHHHHHHHHhc---CCEEEEEecC
Confidence              34699999998740                          123455565654   5899988764

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.16  E-value=0.0031  Score=54.10  Aligned_cols=78  Identities=14%  Similarity=0.131  Sum_probs=53.6

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      -.|++|||+||++++|...++.+...|++|+.+.+.++.+ ..+++      |..   ...|..+.+  -    .+++.+
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~~l------Ga~---~vi~~~~~~--~----~~~v~~  226 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFD-LAKSR------GAE---EVFDYRAPN--L----AQTIRT  226 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECGGGHH-HHHHT------TCS---EEEETTSTT--H----HHHHHH
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCHHHHH-HHHHc------CCc---EEEECCCch--H----HHHHHH
Confidence            3678999999999999999999999999988776554433 44443      222   124666554  2    233333


Q ss_pred             Hh-CCCCEEEEcCCC
Q 024517           83 IL-GNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~-g~id~li~~ag~   96 (266)
                      .. +++|+++.++|.
T Consensus       227 ~t~g~~d~v~d~~g~  241 (371)
T 3gqv_A          227 YTKNNLRYALDCITN  241 (371)
T ss_dssp             HTTTCCCEEEESSCS
T ss_pred             HccCCccEEEECCCc
Confidence            22 469999999985

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.15  E-value=0.0043  Score=53.25  Aligned_cols=78  Identities=13%  Similarity=0.219  Sum_probs=51.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCC-chHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEED-REGAFDEAVDKA   80 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~v~~~~~~~   80 (266)
                      .|++|||+|+ +++|...++.+...|+ +|+.++ ++++.+ .++++      +..   ...|.++. +  ++.+.+.++
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~l------Ga~---~vi~~~~~~~--~~~~~v~~~  261 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFP-KAKAL------GAT---DCLNPRELDK--PVQDVITEL  261 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHT------TCS---EEECGGGCSS--CHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HHHHh------CCc---EEEccccccc--hHHHHHHHH
Confidence            5789999996 8999999998888999 788888 555443 33443      222   12455541 2  233333332


Q ss_pred             HHHhCCCCEEEEcCCC
Q 024517           81 CQILGNLDAFVHCYTY   96 (266)
Q Consensus        81 ~~~~g~id~li~~ag~   96 (266)
                      .  .+.+|++|.++|.
T Consensus       262 ~--~~g~Dvvid~~G~  275 (376)
T 1e3i_A          262 T--AGGVDYSLDCAGT  275 (376)
T ss_dssp             H--TSCBSEEEESSCC
T ss_pred             h--CCCccEEEECCCC
Confidence            2  2479999999975

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.12  E-value=0.0061  Score=51.08  Aligned_cols=118  Identities=14%  Similarity=0.138  Sum_probs=67.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHcC--CeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRG--CRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      ++.|+||+|.+|..++..|+.+|  ..|+++|..+ .+.....+...... .++..+    ...+  +.+.++       
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~-~~~~a~dL~~~~~~-~~l~~~----~~t~--d~~~a~-------   66 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-TPGVAADLSHIETR-ATVKGY----LGPE--QLPDCL-------   66 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS-HHHHHHHHTTSSSS-CEEEEE----ESGG--GHHHHH-------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc-cHHHHHHHhccCcC-ceEEEe----cCCC--CHHHHh-------
Confidence            58999999999999999999988  6899999433 44444455432110 011111    0011  222333       


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                      ...|++|+++|....  +  ..+..+   .+..|+..    ++.+.+.+.+...++.++++|.+..
T Consensus        67 ~~aDvVvi~ag~~~~--~--g~~r~d---l~~~n~~i----~~~i~~~i~~~~p~a~viv~sNPv~  121 (314)
T 1mld_A           67 KGCDVVVIPAGVPRK--P--GMTRDD---LFNTNATI----VATLTAACAQHCPDAMICIISNPVN  121 (314)
T ss_dssp             TTCSEEEECCSCCCC--T--TCCGGG---GHHHHHHH----HHHHHHHHHHHCTTSEEEECSSCHH
T ss_pred             CCCCEEEECCCcCCC--C--CCcHHH---HHHHHHHH----HHHHHHHHHhhCCCeEEEEECCCcc
Confidence            468999999987321  1  122222   24444444    4444444444333689999877654

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.05  E-value=0.00051  Score=50.64  Aligned_cols=70  Identities=19%  Similarity=0.290  Sum_probs=48.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .+++++|.|+ |++|+.+++.|.+.|++|++++ +.++.+++.+++.        ...  .+.   +  +..++++    
T Consensus        20 ~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~--------~~~--~~~---~--~~~~~~~----   79 (144)
T 3oj0_A           20 GGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE--------YEY--VLI---N--DIDSLIK----   79 (144)
T ss_dssp             CCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT--------CEE--EEC---S--CHHHHHH----
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC--------Cce--Eee---c--CHHHHhc----
Confidence            3789999996 8899999999999999988888 5565555555541        111  122   2  2333332    


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                         ..|++|++.+.
T Consensus        80 ---~~Divi~at~~   90 (144)
T 3oj0_A           80 ---NNDVIITATSS   90 (144)
T ss_dssp             ---TCSEEEECSCC
T ss_pred             ---CCCEEEEeCCC
Confidence               57999999875

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.03  E-value=0.0009  Score=54.98  Aligned_cols=47  Identities=15%  Similarity=0.245  Sum_probs=39.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHh
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMM   49 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~   49 (266)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++ +.++.+++++++.
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~  165 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELD  165 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHC
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence            467999999998 5899999999999996 898988 5666677766653

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.99  E-value=0.002  Score=54.07  Aligned_cols=74  Identities=12%  Similarity=0.187  Sum_probs=52.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      .|+++||+||++++|...++.+...|++|+.+.+.++ .+..+++      +...   ..|..+.+  ...+.+      
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~-~~~~~~l------Ga~~---~i~~~~~~--~~~~~~------  213 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRN-HAFLKAL------GAEQ---CINYHEED--FLLAIS------  213 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHH-HHHHHHH------TCSE---EEETTTSC--HHHHCC------
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccch-HHHHHHc------CCCE---EEeCCCcc--hhhhhc------
Confidence            5889999999999999999999999999988775444 3344443      2222   24665544  222222      


Q ss_pred             hCCCCEEEEcCCC
Q 024517           84 LGNLDAFVHCYTY   96 (266)
Q Consensus        84 ~g~id~li~~ag~   96 (266)
                       .++|+++.++|.
T Consensus       214 -~g~D~v~d~~g~  225 (321)
T 3tqh_A          214 -TPVDAVIDLVGG  225 (321)
T ss_dssp             -SCEEEEEESSCH
T ss_pred             -cCCCEEEECCCc
Confidence             579999999874

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.97  E-value=0.0027  Score=54.26  Aligned_cols=102  Identities=14%  Similarity=0.139  Sum_probs=64.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|+++||+| ++++|...++.+...|++|++++ +.++++ ..+++      |...   ..| .+.+  ++.+.+.+...
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~~l------Ga~~---vi~-~~~~--~~~~~v~~~~~  254 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLD-RAFAL------GADH---GIN-RLEE--DWVERVYALTG  254 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHH------TCSE---EEE-TTTS--CHHHHHHHHHT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHH-HHHHc------CCCE---EEc-CCcc--cHHHHHHHHhC
Confidence            578999999 78999999999999999999988 444443 34443      2222   235 4323  23232322211


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                       ..++|+++.++|.  .                         ..+.++..++.   +|+++.++...+
T Consensus       255 -g~g~D~vid~~g~--~-------------------------~~~~~~~~l~~---~G~iv~~G~~~~  291 (363)
T 3uog_A          255 -DRGADHILEIAGG--A-------------------------GLGQSLKAVAP---DGRISVIGVLEG  291 (363)
T ss_dssp             -TCCEEEEEEETTS--S-------------------------CHHHHHHHEEE---EEEEEEECCCSS
T ss_pred             -CCCceEEEECCCh--H-------------------------HHHHHHHHhhc---CCEEEEEecCCC
Confidence             1269999999973  1                         02344555554   689999987543

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.96  E-value=0.0041  Score=53.33  Aligned_cols=78  Identities=13%  Similarity=0.233  Sum_probs=51.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCC-chHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEED-REGAFDEAVDKA   80 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~v~~~~~~~   80 (266)
                      .|+++||+|+ +++|...++.+...|+ +|+.++ ++++++ .++++      +..   ..+|.++. +  ++.+.+.++
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~-~~~~l------Ga~---~vi~~~~~~~--~~~~~~~~~  258 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFE-KAKVF------GAT---DFVNPNDHSE--PISQVLSKM  258 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHT------TCC---EEECGGGCSS--CHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHH-HHHHh------CCc---eEEeccccch--hHHHHHHHH
Confidence            5789999995 8999999998888999 788888 555444 33343      222   12455542 2  233333333


Q ss_pred             HHHhCCCCEEEEcCCC
Q 024517           81 CQILGNLDAFVHCYTY   96 (266)
Q Consensus        81 ~~~~g~id~li~~ag~   96 (266)
                      ..  +.+|++|+++|.
T Consensus       259 ~~--~g~D~vid~~g~  272 (374)
T 1cdo_A          259 TN--GGVDFSLECVGN  272 (374)
T ss_dssp             HT--SCBSEEEECSCC
T ss_pred             hC--CCCCEEEECCCC
Confidence            22  479999999975

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=96.95  E-value=0.0017  Score=51.26  Aligned_cols=72  Identities=14%  Similarity=0.196  Sum_probs=52.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      +++|.|+ |.+|..+++.|.++|++|++++ ++++.+++.+.        ....++..|.++.+  ..+++      ...
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~--------~~~~~i~gd~~~~~--~l~~a------~i~   64 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK--------LKATIIHGDGSHKE--ILRDA------EVS   64 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH--------SSSEEEESCTTSHH--HHHHH------TCC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH--------cCCeEEEcCCCCHH--HHHhc------Ccc
Confidence            4889996 7899999999999999999999 55544443322        24567888998866  44322      124


Q ss_pred             CCCEEEEcCC
Q 024517           86 NLDAFVHCYT   95 (266)
Q Consensus        86 ~id~li~~ag   95 (266)
                      +.|++|.+.+
T Consensus        65 ~ad~vi~~~~   74 (218)
T 3l4b_C           65 KNDVVVILTP   74 (218)
T ss_dssp             TTCEEEECCS
T ss_pred             cCCEEEEecC
Confidence            6899988764

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.91  E-value=0.003  Score=53.92  Aligned_cols=73  Identities=19%  Similarity=0.164  Sum_probs=51.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCC-chHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEED-REGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~v~~~~~~~~   81 (266)
                      .|+++||+|+ +++|..+++.+...|++|+.++ ++++.+ ..+++      +...   ..|..+. +  ..+    ++.
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~-~~~~l------Ga~~---v~~~~~~~~--~~~----~~~  241 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRE-DAMKM------GADH---YIATLEEGD--WGE----KYF  241 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHH-HHHHH------TCSE---EEEGGGTSC--HHH----HSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHc------CCCE---EEcCcCchH--HHH----Hhh
Confidence            5789999999 9999999998888999999888 555544 33343      2221   2455554 4  222    221


Q ss_pred             HHhCCCCEEEEcCCC
Q 024517           82 QILGNLDAFVHCYTY   96 (266)
Q Consensus        82 ~~~g~id~li~~ag~   96 (266)
                         +++|++|.++|.
T Consensus       242 ---~~~D~vid~~g~  253 (360)
T 1piw_A          242 ---DTFDLIVVCASS  253 (360)
T ss_dssp             ---SCEEEEEECCSC
T ss_pred             ---cCCCEEEECCCC
Confidence               579999999975

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.90  E-value=0.0028  Score=55.12  Aligned_cols=72  Identities=18%  Similarity=0.266  Sum_probs=50.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++.|++++|.|+ |++|+.+++.+...|+ +|++++ +.++.++.++++.      ..  .  .+.   +  ++.+.+  
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g------~~--~--~~~---~--~l~~~l--  225 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG------GE--A--VRF---D--ELVDHL--  225 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT------CE--E--CCG---G--GHHHHH--
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC------Cc--e--ecH---H--hHHHHh--
Confidence            367999999998 8999999999999999 899888 4445545555541      11  1  222   2  232332  


Q ss_pred             HHHHhCCCCEEEEcCCC
Q 024517           80 ACQILGNLDAFVHCYTY   96 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~   96 (266)
                           ...|++|.+.+.
T Consensus       226 -----~~aDvVi~at~~  237 (404)
T 1gpj_A          226 -----ARSDVVVSATAA  237 (404)
T ss_dssp             -----HTCSEEEECCSS
T ss_pred             -----cCCCEEEEccCC
Confidence                 268999999864

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.87  E-value=0.003  Score=53.94  Aligned_cols=85  Identities=12%  Similarity=0.128  Sum_probs=50.5

Q ss_pred             CC-cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCC--CchHHHHHHHHH
Q 024517            4 QA-KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEE--DREGAFDEAVDK   79 (266)
Q Consensus         4 ~~-k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~v~~~~~~   79 (266)
                      .| .++||+||++++|...++.+...|++|+++. +.+++++..+.+++.   |... +  .|..+  .+  ++.+.+.+
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~l---Ga~~-v--i~~~~~~~~--~~~~~i~~  237 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL---GATQ-V--ITEDQNNSR--EFGPTIKE  237 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH---TCSE-E--EEHHHHHCG--GGHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhc---CCeE-E--EecCccchH--HHHHHHHH
Confidence            46 8999999999999999988888899988877 444422222222221   2222 1  23332  01  22222222


Q ss_pred             HHH-HhCCCCEEEEcCCC
Q 024517           80 ACQ-ILGNLDAFVHCYTY   96 (266)
Q Consensus        80 ~~~-~~g~id~li~~ag~   96 (266)
                      +.. ..+++|++|.++|.
T Consensus       238 ~t~~~~~g~Dvvid~~G~  255 (364)
T 1gu7_A          238 WIKQSGGEAKLALNCVGG  255 (364)
T ss_dssp             HHHHHTCCEEEEEESSCH
T ss_pred             HhhccCCCceEEEECCCc
Confidence            210 12469999999874

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.86  E-value=0.02  Score=48.11  Aligned_cols=121  Identities=17%  Similarity=0.256  Sum_probs=73.0

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccC-CCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLK-GGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |+.+++.|+|+ |.+|.+++..|+..|. +|++.| ++++++.....+..... .+....+...  ++.+      .   
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~~------a---   70 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDYK------D---   70 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG------G---
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCHH------H---
Confidence            34567888895 8899999999999988 999999 77776655555553211 0112222211  1212      1   


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                          +..-|++|..+|.. . .+  .++..+   .+..|    ..+++.+.+.+.+..+++.++++|.+..
T Consensus        71 ----~~~aDvVIi~ag~p-~-k~--G~~R~d---l~~~N----~~i~~~i~~~i~~~~p~a~vivvtNPvd  126 (321)
T 3p7m_A           71 ----LENSDVVIVTAGVP-R-KP--GMSRDD---LLGIN----IKVMQTVGEGIKHNCPNAFVICITNPLD  126 (321)
T ss_dssp             ----GTTCSEEEECCSCC-C-CT--TCCHHH---HHHHH----HHHHHHHHHHHHHHCTTCEEEECCSSHH
T ss_pred             ----HCCCCEEEEcCCcC-C-CC--CCCHHH---HHHHh----HHHHHHHHHHHHHHCCCcEEEEecCchH
Confidence                24679999999862 1 11  234433   23333    3455555555555444688888876543

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.86  E-value=0.0059  Score=51.60  Aligned_cols=120  Identities=18%  Similarity=0.262  Sum_probs=69.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCC--e-----EEEEecc---cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGC--R-----LVLVGNE---RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFD   74 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~--~-----v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~   74 (266)
                      ..+|+||||+|.||.+++..|+..|.  +     ++++|..   +.++-....+.....  ....    ++....  ...
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~--~~~~----~~~~~~--~~~   74 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL--PLLK----DVIATD--KEE   74 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCC--TTEE----EEEEES--CHH
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhh--cccC----CEEEcC--CcH
Confidence            35799999999999999999998876  5     8888843   244455555543210  1111    222222  111


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCC-eEEEEecccc
Q 024517           75 EAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGG-SIVFLTSIIG  150 (266)
Q Consensus        75 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g-~iv~iss~~~  150 (266)
                      +.       +...|++|+.||.. . .+  .++.   ...++.|+..    ++.+.+.+.+...++ .++++|....
T Consensus        75 ~~-------~~daDvVvitAg~p-r-kp--G~tR---~dll~~N~~i----~~~i~~~i~~~~~~~~~vivvsNPvd  133 (333)
T 5mdh_A           75 IA-------FKDLDVAILVGSMP-R-RD--GMER---KDLLKANVKI----FKCQGAALDKYAKKSVKVIVVGNPAN  133 (333)
T ss_dssp             HH-------TTTCSEEEECCSCC-C-CT--TCCT---TTTHHHHHHH----HHHHHHHHHHHSCTTCEEEECSSSHH
T ss_pred             HH-------hCCCCEEEEeCCCC-C-CC--CCCH---HHHHHHHHHH----HHHHHHHHHHhCCCCeEEEEcCCchH
Confidence            22       24689999999863 1 11  1222   2234445444    455555555554346 5888887543

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.86  E-value=0.0075  Score=52.32  Aligned_cols=77  Identities=14%  Similarity=0.227  Sum_probs=51.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|.+|||+|+ |++|...++.+...|+ +|+.+++.+...+.++++      |...   ..|..+.+  -    .+++.+
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l------Ga~~---vi~~~~~~--~----~~~i~~  276 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL------GADH---VIDPTKEN--F----VEAVLD  276 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH------TCSE---EECTTTSC--H----HHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc------CCCE---EEcCCCCC--H----HHHHHH
Confidence            5789999998 8999999998888999 888888433333444444      2221   23555544  2    233333


Q ss_pred             Hh-C-CCCEEEEcCCC
Q 024517           83 IL-G-NLDAFVHCYTY   96 (266)
Q Consensus        83 ~~-g-~id~li~~ag~   96 (266)
                      .. + ++|+++.++|.
T Consensus       277 ~t~g~g~D~vid~~g~  292 (404)
T 3ip1_A          277 YTNGLGAKLFLEATGV  292 (404)
T ss_dssp             HTTTCCCSEEEECSSC
T ss_pred             HhCCCCCCEEEECCCC
Confidence            32 2 59999999986

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.84  E-value=0.0038  Score=50.56  Aligned_cols=81  Identities=19%  Similarity=0.279  Sum_probs=53.2

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cc-------------------cccHHHHHHHhcccCCCCCeEEE
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NE-------------------RRLSSVAEKMMGSLKGGQPVEVV   61 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~-------------------~~~~~~~~~~~~~~~~~~~~~~~   61 (266)
                      +++++|+|.|++ |+|.++++.|+..|. ++.++| +.                   .+.+..++.+.+..+ ..++..+
T Consensus        26 l~~~~VlvvG~G-glG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~~~v~~~  103 (251)
T 1zud_1           26 LLDSQVLIIGLG-GLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNP-DIQLTAL  103 (251)
T ss_dssp             HHTCEEEEECCS-TTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCT-TSEEEEE
T ss_pred             HhcCcEEEEccC-HHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCC-CCEEEEE
Confidence            467899999985 599999999999998 777776 32                   345566666665543 2344444


Q ss_pred             EEecCCCchHHHHHHHHHHHHHhCCCCEEEEcCC
Q 024517           62 GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYT   95 (266)
Q Consensus        62 ~~D~~~~~~~~v~~~~~~~~~~~g~id~li~~ag   95 (266)
                      ..+++. +  ....+++       ..|++|.+..
T Consensus       104 ~~~~~~-~--~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          104 QQRLTG-E--ALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             CSCCCH-H--HHHHHHH-------HCSEEEECCS
T ss_pred             eccCCH-H--HHHHHHh-------cCCEEEECCC
Confidence            434432 2  3333332       4799998853

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.83  E-value=0.013  Score=49.46  Aligned_cols=120  Identities=11%  Similarity=0.106  Sum_probs=73.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +.+++.|+|+ |++|.+++..|+.+|.  .|++.| +.++++.....+.....-......+..  .|.+           
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~-----------   83 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYS-----------   83 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGG-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHH-----------
Confidence            4568999997 8899999999999987  799999 766677666666543110011122211  1222           


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                        .+..-|++|.++|.. . .+  .++..   ..++.|.    -+++.+.+.+.+..+++.++++|.+..
T Consensus        84 --~~~~aDiVvi~aG~~-~-kp--G~tR~---dL~~~N~----~I~~~i~~~i~~~~p~a~vlvvtNPvd  140 (331)
T 4aj2_A           84 --VTANSKLVIITAGAR-Q-QE--GESRL---NLVQRNV----NIFKFIIPNVVKYSPQCKLLIVSNPVD  140 (331)
T ss_dssp             --GGTTEEEEEECCSCC-C-CT--TCCGG---GGHHHHH----HHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred             --HhCCCCEEEEccCCC-C-CC--CccHH---HHHHHHH----HHHHHHHHHHHHHCCCeEEEEecChHH
Confidence              124689999999872 2 11  23332   2333343    445555555555444688888887654

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.82  E-value=0.0055  Score=52.50  Aligned_cols=78  Identities=13%  Similarity=0.210  Sum_probs=51.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCC-chHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEED-REGAFDEAVDKA   80 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~v~~~~~~~   80 (266)
                      .|+++||+|+ +++|...++.+...|+ +|+.++ ++++. +..+++      +...   ..|.++. +  ++.+.+.++
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~-~~~~~l------Ga~~---vi~~~~~~~--~~~~~v~~~  256 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKF-ARAKEF------GATE---CINPQDFSK--PIQEVLIEM  256 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHHHH------TCSE---EECGGGCSS--CHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHHc------CCce---Eeccccccc--cHHHHHHHH
Confidence            5789999996 8999999998888899 788888 55544 444444      2221   2355542 2  233333332


Q ss_pred             HHHhCCCCEEEEcCCC
Q 024517           81 CQILGNLDAFVHCYTY   96 (266)
Q Consensus        81 ~~~~g~id~li~~ag~   96 (266)
                      .  .+.+|++|.++|.
T Consensus       257 ~--~~g~D~vid~~g~  270 (373)
T 2fzw_A          257 T--DGGVDYSFECIGN  270 (373)
T ss_dssp             T--TSCBSEEEECSCC
T ss_pred             h--CCCCCEEEECCCc
Confidence            2  1479999999875

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.82  E-value=0.018  Score=48.46  Aligned_cols=119  Identities=16%  Similarity=0.208  Sum_probs=73.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +..++.|+|+ |++|..++..++..+.  .+++.| +.++++.....+....+-..++.+.. |  +.+      .+   
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~------a~---   74 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYS------DA---   74 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG------GG---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHH------Hh---
Confidence            3468999999 8999999999998886  799999 77777766666654321112333332 1  222      12   


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                          ..-|++|..+|.. . .+  ..+..+   .+..|    .-+++.+.+.+.+..+++.++++|.+..
T Consensus        75 ----~~aDvVii~ag~~-~-k~--g~~R~d---l~~~n----~~i~~~i~~~i~~~~p~a~iiv~tNPv~  129 (326)
T 2zqz_A           75 ----KDADLVVITAGAP-Q-KP--GETRLD---LVNKN----LKILKSIVDPIVDSGFNGIFLVAANPVD  129 (326)
T ss_dssp             ----GGCSEEEECCCCC---------CHHH---HHHHH----HHHHHHHHHHHHHHTCCSEEEECSSSHH
T ss_pred             ----CCCCEEEEcCCCC-C-CC--CCCHHH---HHHHH----HHHHHHHHHHHHHHCCCeEEEEeCCcHH
Confidence                3679999999872 1 11  233332   23333    3455556666555544788998877654

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.81  E-value=0.011  Score=49.61  Aligned_cols=121  Identities=16%  Similarity=0.213  Sum_probs=71.3

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccC-CCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLK-GGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++.+++.|+|+ |.+|.+++..|+..|. +|++.| ++++++.....+..... ......+...  +|.+      .   
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d~~------a---   72 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--NDYA------A---   72 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SSGG------G---
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CCHH------H---
Confidence            45678999998 8899999999999998 999999 77766554444443210 0012222211  1212      1   


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                          +..-|++|.++|.. . .+  .++..   ..+..|    ..+++.+.+.+.+..+++.++++|.+..
T Consensus        73 ----~~~aDiVIiaag~p-~-k~--G~~R~---dl~~~N----~~i~~~i~~~i~~~~p~a~iivvtNPvd  128 (324)
T 3gvi_A           73 ----IEGADVVIVTAGVP-R-KP--GMSRD---DLLGIN----LKVMEQVGAGIKKYAPEAFVICITNPLD  128 (324)
T ss_dssp             ----GTTCSEEEECCSCC-C-C-------C---HHHHHH----HHHHHHHHHHHHHHCTTCEEEECCSSHH
T ss_pred             ----HCCCCEEEEccCcC-C-CC--CCCHH---HHHHhh----HHHHHHHHHHHHHHCCCeEEEecCCCcH
Confidence                24679999999862 1 11  12222   233333    3455666666555544688888887654

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.81  E-value=0.027  Score=47.38  Aligned_cols=119  Identities=12%  Similarity=0.041  Sum_probs=72.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCCCCCeEEE-EEecCCCchHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVV-GLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~v~~~~~~   79 (266)
                      ..+++.|+|+ |.+|..++..|+.+|.  .|++.| ++++++.....+.....-.....+. ..|..+            
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~------------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV------------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH------------
Confidence            3467999999 9999999999999997  899999 7776666655554321100122222 223322            


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                          +..-|++|-++|.. . .+  .++..+   .+..    ...+.+.+.+.+.+..+++.++++|.+..
T Consensus        87 ----~~daDiVIitaG~p-~-kp--G~tR~d---ll~~----N~~I~k~i~~~I~k~~P~a~ilvvtNPvd  142 (330)
T 3ldh_A           87 ----SAGSKLVVITAGAR-Q-QE--GESRLN---LVQR----NVNIFKFIIPNIVKHSPDCLKELHPELGT  142 (330)
T ss_dssp             ----CSSCSEEEECCSCC-C-CS--SCCTTG---GGHH----HHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred             ----hCCCCEEEEeCCCC-C-CC--CCCHHH---HHHh----hHHHHHHHHHHHHhhCCCceEEeCCCccH
Confidence                23689999999873 2 21  122211   2222    33445666666555544688888887644

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.81  E-value=0.0056  Score=52.49  Aligned_cols=78  Identities=13%  Similarity=0.216  Sum_probs=51.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCC-chHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEED-REGAFDEAVDKA   80 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~v~~~~~~~   80 (266)
                      .|+++||+|+ +++|..+++.+...|+ +|+.++ ++++.+ .++++      +..   ...|.++. +  ++.+.+.++
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~-~~~~l------Ga~---~vi~~~~~~~--~~~~~~~~~  257 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFA-KAKEV------GAT---ECVNPQDYKK--PIQEVLTEM  257 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHT------TCS---EEECGGGCSS--CHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HHHHh------CCc---eEecccccch--hHHHHHHHH
Confidence            5789999995 8999999999888999 788888 554443 33443      222   12455541 2  233333332


Q ss_pred             HHHhCCCCEEEEcCCC
Q 024517           81 CQILGNLDAFVHCYTY   96 (266)
Q Consensus        81 ~~~~g~id~li~~ag~   96 (266)
                      .  .+.+|++|.++|.
T Consensus       258 ~--~~g~D~vid~~g~  271 (374)
T 2jhf_A          258 S--NGGVDFSFEVIGR  271 (374)
T ss_dssp             T--TSCBSEEEECSCC
T ss_pred             h--CCCCcEEEECCCC
Confidence            2  1479999999975

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.80  E-value=0.0017  Score=54.64  Aligned_cols=74  Identities=19%  Similarity=0.067  Sum_probs=46.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      ++||+|+++++|..+++.+...|++|+.++ ++++++. .+++      +...   .+|..+.+    .+.+.++  ..+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~-~~~l------Ga~~---~i~~~~~~----~~~~~~~--~~~  215 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDY-LRVL------GAKE---VLAREDVM----AERIRPL--DKQ  215 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHH-HHHT------TCSE---EEECC-------------C--CSC
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHc------CCcE---EEecCCcH----HHHHHHh--cCC
Confidence            799999999999999999999999999888 5555443 3333      2222   13544321    1112222  114


Q ss_pred             CCCEEEEcCCC
Q 024517           86 NLDAFVHCYTY   96 (266)
Q Consensus        86 ~id~li~~ag~   96 (266)
                      ++|++|+++|.
T Consensus       216 ~~d~vid~~g~  226 (328)
T 1xa0_A          216 RWAAAVDPVGG  226 (328)
T ss_dssp             CEEEEEECSTT
T ss_pred             cccEEEECCcH
Confidence            69999999875

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.79  E-value=0.0072  Score=51.44  Aligned_cols=80  Identities=15%  Similarity=0.161  Sum_probs=49.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|+++||+|+ +++|...++.+...|+ +|+++++.+...+..+++      +.. .  ..|..+.+..+   ..+++.+
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l------Ga~-~--vi~~~~~~~~~---~~~~i~~  237 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI------GAD-L--VLQISKESPQE---IARKVEG  237 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT------TCS-E--EEECSSCCHHH---HHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh------CCC-E--EEcCcccccch---HHHHHHH
Confidence            5789999996 8999999998888899 888888333323333333      222 1  23544211012   2233333


Q ss_pred             Hh-CCCCEEEEcCCC
Q 024517           83 IL-GNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~-g~id~li~~ag~   96 (266)
                      .. +++|++|.++|.
T Consensus       238 ~~~~g~D~vid~~g~  252 (356)
T 1pl8_A          238 QLGCKPEVTIECTGA  252 (356)
T ss_dssp             HHTSCCSEEEECSCC
T ss_pred             HhCCCCCEEEECCCC
Confidence            22 479999999875

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.78  E-value=0.024  Score=47.44  Aligned_cols=120  Identities=17%  Similarity=0.221  Sum_probs=72.1

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCC-CCCeEEEEEecCCCchHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKG-GQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      ++..++.|+|+ |.+|..++..|+.+|.  .|++.| ++++++.....+....+- +..+.+..   .+.+      .  
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~---~~~~------a--   71 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA---GEYS------D--   71 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE---CCGG------G--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe---CCHH------H--
Confidence            45668999998 8999999999999884  899999 766665544444322110 12333332   2222      1  


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                           +..-|++|..+|.. . .+  ..+..+   .+.    ...-+++.+.+.+.+..+++.++++|.+..
T Consensus        72 -----~~~aDvVvi~ag~~-~-~~--g~~r~d---l~~----~n~~i~~~i~~~i~~~~p~a~viv~tNPv~  127 (317)
T 3d0o_A           72 -----CHDADLVVICAGAA-Q-KP--GETRLD---LVS----KNLKIFKSIVGEVMASKFDGIFLVATNPVD  127 (317)
T ss_dssp             -----GTTCSEEEECCCCC-C-CT--TCCHHH---HHH----HHHHHHHHHHHHHHHTTCCSEEEECSSSHH
T ss_pred             -----hCCCCEEEECCCCC-C-CC--CCcHHH---HHH----HHHHHHHHHHHHHHHhCCCcEEEEecCcHH
Confidence                 24689999999872 2 11  233332   233    333455566666555544688888776543

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.78  E-value=0.0056  Score=52.66  Aligned_cols=79  Identities=9%  Similarity=0.071  Sum_probs=51.7

Q ss_pred             CCcEEEEec-CCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTS-DGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItG-a~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .+.++||.| |++++|...++.+...|++|+.++ ++++.+ ..+++      +...   ..|..+.+  -.+++ .+..
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~-~~~~l------Ga~~---~~~~~~~~--~~~~v-~~~t  236 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQAD-LLKAQ------GAVH---VCNAASPT--FMQDL-TEAL  236 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHH-HHHHT------TCSC---EEETTSTT--HHHHH-HHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHhC------CCcE---EEeCCChH--HHHHH-HHHh
Confidence            477899997 899999999999888999999988 544433 33333      2221   23555544  22222 2222


Q ss_pred             HHhCCCCEEEEcCCC
Q 024517           82 QILGNLDAFVHCYTY   96 (266)
Q Consensus        82 ~~~g~id~li~~ag~   96 (266)
                      .. ..+|+++.++|.
T Consensus       237 ~~-~g~d~v~d~~g~  250 (379)
T 3iup_A          237 VS-TGATIAFDATGG  250 (379)
T ss_dssp             HH-HCCCEEEESCEE
T ss_pred             cC-CCceEEEECCCc
Confidence            21 269999999986

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.77  E-value=0.0035  Score=53.45  Aligned_cols=99  Identities=13%  Similarity=0.189  Sum_probs=63.1

Q ss_pred             CCcEEEEecCCCchHHHH-HHHH-HHcCCe-EEEEecccc---cHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNI-AFHL-AKRGCR-LVLVGNERR---LSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAV   77 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~i-a~~l-~~~g~~-v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~   77 (266)
                      +++++||+|+ +++|... ++.+ ...|++ |+.+++.+.   ..+..+++        .+..+  |..+.+   +.+ +
T Consensus       172 ~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~l--------Ga~~v--~~~~~~---~~~-i  236 (357)
T 2b5w_A          172 DPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEEL--------DATYV--DSRQTP---VED-V  236 (357)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHT--------TCEEE--ETTTSC---GGG-H
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHc--------CCccc--CCCccC---HHH-H
Confidence            3489999999 9999999 7766 677997 998884333   23333333        22333  666544   223 3


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           78 DKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                      .++   .+.+|++|.++|.. .                         ..+.++..++.   +|+++.++...
T Consensus       237 ~~~---~gg~Dvvid~~g~~-~-------------------------~~~~~~~~l~~---~G~iv~~g~~~  276 (357)
T 2b5w_A          237 PDV---YEQMDFIYEATGFP-K-------------------------HAIQSVQALAP---NGVGALLGVPS  276 (357)
T ss_dssp             HHH---SCCEEEEEECSCCH-H-------------------------HHHHHHHHEEE---EEEEEECCCCC
T ss_pred             HHh---CCCCCEEEECCCCh-H-------------------------HHHHHHHHHhc---CCEEEEEeCCC
Confidence            333   24799999998751 0                         23445555544   68999988754

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.76  E-value=0.034  Score=46.07  Aligned_cols=117  Identities=13%  Similarity=0.154  Sum_probs=71.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCC-CCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKG-GQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++.|+|+ |.+|.+++..|+..|.  +|++.+ ++++++.....+...... .....+...  +|.+      .+     
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~------a~-----   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS------LL-----   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG------GG-----
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHH------Hh-----
Confidence            4789999 8999999999999998  899999 666655333333322110 112222221  1222      12     


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                        ..-|++|.++|.. . ++  .++..++   +..|    .-+++.+.+.+.+..+++.++++|.+..
T Consensus        68 --~~aDiVViaag~~-~-kp--G~~R~dl---~~~N----~~i~~~i~~~i~~~~p~a~iivvsNPvd  122 (294)
T 1oju_A           68 --KGSEIIVVTAGLA-R-KP--GMTRLDL---AHKN----AGIIKDIAKKIVENAPESKILVVTNPMD  122 (294)
T ss_dssp             --TTCSEEEECCCCC-C-CS--SCCHHHH---HHHH----HHHHHHHHHHHHTTSTTCEEEECSSSHH
T ss_pred             --CCCCEEEECCCCC-C-CC--CCcHHHH---HHHH----HHHHHHHHHHHHhhCCCeEEEEeCCcch
Confidence              3679999999872 1 11  2344433   3333    4566777777766655788888887543

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.75  E-value=0.0029  Score=54.28  Aligned_cols=105  Identities=17%  Similarity=0.240  Sum_probs=65.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|+++||+|+ |++|...++.+...|+ +|+++++.+...+.++++      |...   ..|.++.+  -.+.+.+....
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l------Ga~~---vi~~~~~~--~~~~i~~~~~~  249 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV------GATA---TVDPSAGD--VVEAIAGPVGL  249 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH------TCSE---EECTTSSC--HHHHHHSTTSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc------CCCE---EECCCCcC--HHHHHHhhhhc
Confidence            5789999998 8999999998888999 788887443334444444      2221   24665555  22222210001


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                      ..+++|+++.++|..                          ...+.++..++.   +|+++.++...
T Consensus       250 ~~gg~Dvvid~~G~~--------------------------~~~~~~~~~l~~---~G~vv~~G~~~  287 (370)
T 4ej6_A          250 VPGGVDVVIECAGVA--------------------------ETVKQSTRLAKA---GGTVVILGVLP  287 (370)
T ss_dssp             STTCEEEEEECSCCH--------------------------HHHHHHHHHEEE---EEEEEECSCCC
T ss_pred             cCCCCCEEEECCCCH--------------------------HHHHHHHHHhcc---CCEEEEEeccC
Confidence            124799999998751                          123445555554   68999887653

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.73  E-value=0.024  Score=47.38  Aligned_cols=116  Identities=18%  Similarity=0.165  Sum_probs=72.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcC--CeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRG--CRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g--~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ++.|+|+ |.+|..++..++.++  .++++.| +.++++.....+....+-..++.+.. +  +.+      .       
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~------a-------   64 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYG------D-------   64 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG------G-------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHH------H-------
Confidence            6889998 899999999999987  4799999 76667766666654321112333332 2  222      1       


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                      +..-|++|..+|.. . .+  ..+..+   .+..    ..-+++.+.+.+.+..+++.++++|.+..
T Consensus        65 ~~~aD~Vii~ag~~-~-~~--g~~r~d---l~~~----n~~i~~~i~~~i~~~~p~a~iiv~tNPv~  120 (310)
T 2xxj_A           65 LEGARAVVLAAGVA-Q-RP--GETRLQ---LLDR----NAQVFAQVVPRVLEAAPEAVLLVATNPVD  120 (310)
T ss_dssp             GTTEEEEEECCCCC-C-CT--TCCHHH---HHHH----HHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred             hCCCCEEEECCCCC-C-CC--CcCHHH---HHHh----hHHHHHHHHHHHHHHCCCcEEEEecCchH
Confidence            24679999999872 1 11  234333   2333    33455556666555544788888877654

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.70  E-value=0.0068  Score=51.92  Aligned_cols=78  Identities=15%  Similarity=0.219  Sum_probs=50.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCC-chHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEED-REGAFDEAVDKA   80 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~v~~~~~~~   80 (266)
                      .|++|||+|+ +++|...++.+...|+ +|+.++ +++++ +.++++      +..   ...|..+. +  ++.+.+.++
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~l------Ga~---~vi~~~~~~~--~~~~~i~~~  257 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKF-PKAIEL------GAT---ECLNPKDYDK--PIYEVICEK  257 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHHHT------TCS---EEECGGGCSS--CHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHH-HHHHHc------CCc---EEEecccccc--hHHHHHHHH
Confidence            5789999995 8999999998888899 788888 55444 344443      222   12355541 2  233333322


Q ss_pred             HHHhCCCCEEEEcCCC
Q 024517           81 CQILGNLDAFVHCYTY   96 (266)
Q Consensus        81 ~~~~g~id~li~~ag~   96 (266)
                      .  .+.+|++|.++|.
T Consensus       258 t--~gg~Dvvid~~g~  271 (373)
T 1p0f_A          258 T--NGGVDYAVECAGR  271 (373)
T ss_dssp             T--TSCBSEEEECSCC
T ss_pred             h--CCCCCEEEECCCC
Confidence            1  1479999999875

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.65  E-value=0.0041  Score=53.48  Aligned_cols=78  Identities=15%  Similarity=0.259  Sum_probs=51.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCC-CchHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEE-DREGAFDEAVDKA   80 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~v~~~~~~~   80 (266)
                      .|.+|||+|+ +++|...++.+...|+ +|++++ ++++++ .++++      |...   ..|..+ .+  ++.+.+.++
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~-~a~~l------Ga~~---vi~~~~~~~--~~~~~i~~~  259 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYE-TAKKF------GVNE---FVNPKDHDK--PIQEVIVDL  259 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHH-HHHTT------TCCE---EECGGGCSS--CHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HHHHc------CCcE---EEccccCch--hHHHHHHHh
Confidence            5789999998 8999999998888999 799988 555443 44333      2222   245553 22  233333332


Q ss_pred             HHHhCCCCEEEEcCCC
Q 024517           81 CQILGNLDAFVHCYTY   96 (266)
Q Consensus        81 ~~~~g~id~li~~ag~   96 (266)
                      .  .+.+|+++.++|.
T Consensus       260 ~--~gg~D~vid~~g~  273 (378)
T 3uko_A          260 T--DGGVDYSFECIGN  273 (378)
T ss_dssp             T--TSCBSEEEECSCC
T ss_pred             c--CCCCCEEEECCCC
Confidence            2  2479999999875

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.64  E-value=0.019  Score=48.19  Aligned_cols=117  Identities=17%  Similarity=0.217  Sum_probs=72.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .++.|+|+ |++|..++..++.++.  .+++.| +.++++.....+....+-...+.+.. |  +.+      .      
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~~~------a------   69 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--EYS------D------   69 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--CGG------G------
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--CHH------H------
Confidence            57999998 8999999999999886  799999 77777766666654421112333332 1  222      1      


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                       +..-|++|..+|.. . .+  ..+..+   .+    ....-+++.+.+.+.+..+++.++++|.+..
T Consensus        70 -~~~aDvVii~ag~~-~-~~--g~~R~d---l~----~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~  125 (318)
T 1ez4_A           70 -CKDADLVVITAGAP-Q-KP--GESRLD---LV----NKNLNILSSIVKPVVDSGFDGIFLVAANPVD  125 (318)
T ss_dssp             -GTTCSEEEECCCC-----------------CH----HHHHHHHHHHHHHHHHTTCCSEEEECSSSHH
T ss_pred             -hCCCCEEEECCCCC-C-CC--CCCHHH---HH----HHHHHHHHHHHHHHHHhCCCeEEEEeCCcHH
Confidence             24689999999872 1 11  112111   22    3334466666676666555788988877654

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.63  E-value=0.004  Score=53.29  Aligned_cols=77  Identities=9%  Similarity=0.067  Sum_probs=48.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHH-cCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAK-RGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~-~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .|+++||+||++++|...++.+.. .|++|+.++ +.++. +.++++      |...   ..|..+ +   ..+.+.+. 
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~-~~~~~l------Gad~---vi~~~~-~---~~~~v~~~-  235 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQ-EWVKSL------GAHH---VIDHSK-P---LAAEVAAL-  235 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHH-HHHHHT------TCSE---EECTTS-C---HHHHHHTT-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHH-HHHHHc------CCCE---EEeCCC-C---HHHHHHHh-
Confidence            578999999999999988876665 488999998 44443 333333      2222   134433 2   22222222 


Q ss_pred             HHhCCCCEEEEcCCC
Q 024517           82 QILGNLDAFVHCYTY   96 (266)
Q Consensus        82 ~~~g~id~li~~ag~   96 (266)
                       ..+++|+++.++|.
T Consensus       236 -~~~g~Dvvid~~g~  249 (363)
T 4dvj_A          236 -GLGAPAFVFSTTHT  249 (363)
T ss_dssp             -CSCCEEEEEECSCH
T ss_pred             -cCCCceEEEECCCc
Confidence             22479999999875

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.61  E-value=0.0034  Score=53.32  Aligned_cols=68  Identities=15%  Similarity=0.135  Sum_probs=48.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|+++||+|+ +++|...++.+...|++|++++ ++++.+ ..+++      |....+     ++.+  .+.+       
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~~l------Ga~~v~-----~~~~--~~~~-------  233 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQ-DALSM------GVKHFY-----TDPK--QCKE-------  233 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHH-HHHHT------TCSEEE-----SSGG--GCCS-------
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHhc------CCCeec-----CCHH--HHhc-------
Confidence            5889999997 8999999999888999999988 555544 44443      223222     3333  2221       


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                         .+|+++.++|.
T Consensus       234 ---~~D~vid~~g~  244 (348)
T 3two_A          234 ---ELDFIISTIPT  244 (348)
T ss_dssp             ---CEEEEEECCCS
T ss_pred             ---CCCEEEECCCc
Confidence               69999999986

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.61  E-value=0.00021  Score=61.19  Aligned_cols=46  Identities=17%  Similarity=0.266  Sum_probs=37.8

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKM   48 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~   48 (266)
                      +++||+++|.|. |.+|..+|+.|.+.|++|++.+ +.+++++..++.
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            578999999987 6799999999999999999888 655555555543

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.60  E-value=0.0065  Score=52.08  Aligned_cols=73  Identities=11%  Similarity=0.088  Sum_probs=49.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|.++||+|+ +++|..+++.+...|++|++++ ++++.+ ..+++      +...   ..|..+.+  .+    +++. 
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~-~a~~l------Ga~~---vi~~~~~~--~~----~~~~-  255 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKAL------GADE---VVNSRNAD--EM----AAHL-  255 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHH------TCSE---EEETTCHH--HH----HTTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHc------CCcE---EeccccHH--HH----HHhh-
Confidence            5789999998 7899999998888999998888 555544 33343      2221   23544422  22    2221 


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                        +++|++|.++|.
T Consensus       256 --~g~Dvvid~~g~  267 (369)
T 1uuf_A          256 --KSFDFILNTVAA  267 (369)
T ss_dssp             --TCEEEEEECCSS
T ss_pred             --cCCCEEEECCCC
Confidence              579999999986

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.56  E-value=0.0081  Score=51.67  Aligned_cols=103  Identities=16%  Similarity=0.196  Sum_probs=63.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcC-CeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRG-CRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g-~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .|+++||+| ++++|...++.+...| ++|+.++ ++++.+ ..+++      +... +  .|....++.+   ..+++.
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~~~~l------Ga~~-v--i~~~~~~~~~---~~~~v~  260 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLK-LAEEI------GADL-T--LNRRETSVEE---RRKAIM  260 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHH-HHHHT------TCSE-E--EETTTSCHHH---HHHHHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHH-HHHHc------CCcE-E--EeccccCcch---HHHHHH
Confidence            578999999 8999999999888899 5999998 444433 33332      2221 2  3444111112   333344


Q ss_pred             HHh-C-CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           82 QIL-G-NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        82 ~~~-g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                      +.. + .+|++|.++|..                          ..++.+++.++.   +|+++.++...
T Consensus       261 ~~~~g~g~Dvvid~~g~~--------------------------~~~~~~~~~l~~---~G~iv~~G~~~  301 (380)
T 1vj0_A          261 DITHGRGADFILEATGDS--------------------------RALLEGSELLRR---GGFYSVAGVAV  301 (380)
T ss_dssp             HHTTTSCEEEEEECSSCT--------------------------THHHHHHHHEEE---EEEEEECCCCS
T ss_pred             HHhCCCCCcEEEECCCCH--------------------------HHHHHHHHHHhc---CCEEEEEecCC
Confidence            333 2 599999999851                          013444555554   68999887653

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.55  E-value=0.0073  Score=52.40  Aligned_cols=41  Identities=7%  Similarity=-0.036  Sum_probs=34.5

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSV   44 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~   44 (266)
                      +.+++++|+|+ |.+|..+++.+...|++|++++ +.++++..
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            56899999997 7899999999999999999999 55555543

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.51  E-value=0.0025  Score=54.39  Aligned_cols=37  Identities=14%  Similarity=0.167  Sum_probs=31.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccc
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERR   40 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~   40 (266)
                      .|.+|||+||++++|...++.+...|++++++. +.+.
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPD  204 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccc
Confidence            578999999999999999988888899888776 4433

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.51  E-value=0.0085  Score=51.07  Aligned_cols=76  Identities=14%  Similarity=0.154  Sum_probs=49.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHc-CCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKR-GCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~-g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .|+++||+|+ +++|...++.+... |++|+.++ ++++++ ..+++      |...   ..|..+.    +.+.+.++.
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~-~~~~l------Ga~~---vi~~~~~----~~~~v~~~~  250 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLK-LAERL------GADH---VVDARRD----PVKQVMELT  250 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHH-HHHHT------TCSE---EEETTSC----HHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHH-HHHHh------CCCE---EEeccch----HHHHHHHHh
Confidence            5789999999 79999999988888 99999888 444433 33333      2221   1354432    112222221


Q ss_pred             HHhC-CCCEEEEcCCC
Q 024517           82 QILG-NLDAFVHCYTY   96 (266)
Q Consensus        82 ~~~g-~id~li~~ag~   96 (266)
                        .+ ++|++|.++|.
T Consensus       251 --~g~g~Dvvid~~G~  264 (359)
T 1h2b_A          251 --RGRGVNVAMDFVGS  264 (359)
T ss_dssp             --TTCCEEEEEESSCC
T ss_pred             --CCCCCcEEEECCCC
Confidence              13 69999999985

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.48  E-value=0.01  Score=50.37  Aligned_cols=101  Identities=14%  Similarity=0.140  Sum_probs=65.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|.++||+|+ +++|...++.+...|+ +|+.+++.+...+..+++      +..   ...|..+.+  -    .+++.+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l------Ga~---~vi~~~~~~--~----~~~v~~  229 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY------GAT---DIINYKNGD--I----VEQILK  229 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH------TCC---EEECGGGSC--H----HHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh------CCc---eEEcCCCcC--H----HHHHHH
Confidence            5789999985 8999999988888899 799888443333444444      222   224555555  3    233333


Q ss_pred             Hh-C-CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           83 IL-G-NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        83 ~~-g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                      .. + ++|+++.++|..                          ...+.+++.++.   +|+++.++...
T Consensus       230 ~t~g~g~D~v~d~~g~~--------------------------~~~~~~~~~l~~---~G~~v~~G~~~  269 (352)
T 3fpc_A          230 ATDGKGVDKVVIAGGDV--------------------------HTFAQAVKMIKP---GSDIGNVNYLG  269 (352)
T ss_dssp             HTTTCCEEEEEECSSCT--------------------------THHHHHHHHEEE---EEEEEECCCCC
T ss_pred             HcCCCCCCEEEECCCCh--------------------------HHHHHHHHHHhc---CCEEEEecccC
Confidence            33 2 599999998761                          123445555554   68999887643

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.47  E-value=0.0069  Score=51.11  Aligned_cols=91  Identities=15%  Similarity=0.160  Sum_probs=54.9

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cc-------------------cccHHHHHHHhcccCCCCCeEEE
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NE-------------------RRLSSVAEKMMGSLKGGQPVEVV   61 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~-------------------~~~~~~~~~~~~~~~~~~~~~~~   61 (266)
                      +++++|+|.|++ |+|.++++.|+..|. ++.++| +.                   .+.+..++.+.+.++. .++..+
T Consensus        32 L~~~~VlIvGaG-GlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~-v~v~~~  109 (340)
T 3rui_A           32 IKNTKVLLLGAG-TLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPL-MDATGV  109 (340)
T ss_dssp             HHTCEEEEECCS-HHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTT-CEEEEE
T ss_pred             HhCCEEEEECCC-HHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCC-CEEEEE
Confidence            467899999885 599999999999998 777876 32                   3455566667666542 445555


Q ss_pred             EEecCCC-----chHHHHHHHHHHHHHhCCCCEEEEcCC
Q 024517           62 GLDMEED-----REGAFDEAVDKACQILGNLDAFVHCYT   95 (266)
Q Consensus        62 ~~D~~~~-----~~~~v~~~~~~~~~~~g~id~li~~ag   95 (266)
                      ..++.-+     ++.....-.+.+.+.+...|+||++.-
T Consensus       110 ~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tD  148 (340)
T 3rui_A          110 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD  148 (340)
T ss_dssp             CCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred             eccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCC
Confidence            4443110     000011111222333346799999864

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.47  E-value=0.0056  Score=51.84  Aligned_cols=99  Identities=12%  Similarity=0.132  Sum_probs=62.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHc--CCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKR--GCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~--g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      .|+++||+|+ +++|...++.+...  |++|+.++ +.++. +..+++      +... +  .|..+.+     ..++++
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~-~~~~~l------Ga~~-v--i~~~~~~-----~~~~~~  233 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHR-DFALEL------GADY-V--SEMKDAE-----SLINKL  233 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHH-HHHHHH------TCSE-E--ECHHHHH-----HHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHH-HHHHHh------CCCE-E--eccccch-----HHHHHh
Confidence            5789999999 89999999988888  99999888 44443 333333      2221 1  2332201     122232


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                      .. ..++|++|.++|..                          ...+.+++.++.   +|+++.++..
T Consensus       234 ~~-g~g~D~vid~~g~~--------------------------~~~~~~~~~l~~---~G~iv~~g~~  271 (344)
T 2h6e_A          234 TD-GLGASIAIDLVGTE--------------------------ETTYNLGKLLAQ---EGAIILVGME  271 (344)
T ss_dssp             HT-TCCEEEEEESSCCH--------------------------HHHHHHHHHEEE---EEEEEECCCC
T ss_pred             hc-CCCccEEEECCCCh--------------------------HHHHHHHHHhhc---CCEEEEeCCC
Confidence            22 12699999999751                          123445555554   5899988764

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.40  E-value=0.02  Score=48.92  Aligned_cols=76  Identities=13%  Similarity=0.173  Sum_probs=49.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .|+++||+|+ +++|...++.+...|+ +|+.++ ++++. +.++++      +...   ..|..+.+  -.    +++.
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~-~~a~~l------Ga~~---vi~~~~~~--~~----~~~~  252 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRL-ELAKQL------GATH---VINSKTQD--PV----AAIK  252 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHH-HHHHHH------TCSE---EEETTTSC--HH----HHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHH-HHHHHc------CCCE---EecCCccC--HH----HHHH
Confidence            5789999995 8999999988888899 688887 44433 334443      2221   23555544  22    2222


Q ss_pred             HHh-CCCCEEEEcCCC
Q 024517           82 QIL-GNLDAFVHCYTY   96 (266)
Q Consensus        82 ~~~-g~id~li~~ag~   96 (266)
                      +.. +++|++|.++|.
T Consensus       253 ~~~~gg~D~vid~~g~  268 (371)
T 1f8f_A          253 EITDGGVNFALESTGS  268 (371)
T ss_dssp             HHTTSCEEEEEECSCC
T ss_pred             HhcCCCCcEEEECCCC
Confidence            222 369999999874

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.36  E-value=0.044  Score=45.60  Aligned_cols=115  Identities=17%  Similarity=0.200  Sum_probs=61.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ++.|+|+ |.+|..++..|+.+|.  +|++.| ++++++.....+....+-.....+..   ++.+             .
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~~-------------a   64 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGHS-------------E   64 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECGG-------------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCHH-------------H
Confidence            5889998 8899999999999998  899999 65555544444432211011222221   1212             1


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                      +...|++|.+++....  +  ..+.   ...+..|+.    +.+.+.+.+.+..+++.++++|...
T Consensus        65 ~~~aDvVIi~~~~~~~--~--g~~r---~dl~~~n~~----i~~~i~~~i~~~~p~~~vi~~tNP~  119 (304)
T 2v6b_A           65 LADAQVVILTAGANQK--P--GESR---LDLLEKNAD----IFRELVPQITRAAPDAVLLVTSNPV  119 (304)
T ss_dssp             GTTCSEEEECC-------------------CHHHHHH----HHHHHHHHHHHHCSSSEEEECSSSH
T ss_pred             hCCCCEEEEcCCCCCC--C--CCcH---HHHHHhHHH----HHHHHHHHHHHhCCCeEEEEecCch
Confidence            2468999999976211  1  1111   122333333    4444444444433256777766544

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.35  E-value=0.00058  Score=58.14  Aligned_cols=34  Identities=18%  Similarity=0.233  Sum_probs=30.8

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      +++||++.|.| .|.||+.+|+.+.+.|++|++.|
T Consensus       172 ~L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD  205 (355)
T 1c1d_A          172 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVAD  205 (355)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEC
T ss_pred             CCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEe
Confidence            57899999996 57899999999999999999777

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.35  E-value=0.024  Score=48.63  Aligned_cols=42  Identities=7%  Similarity=-0.036  Sum_probs=34.8

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVA   45 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~   45 (266)
                      +.+++++|+|+ |.+|..+++.+...|++|++++ +.++++...
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  224 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR  224 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            36789999999 5799999999999999999999 655555443

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.32  E-value=0.11  Score=43.85  Aligned_cols=120  Identities=14%  Similarity=0.209  Sum_probs=68.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-------eEEEEe-ccc--ccHHHHHHHhcccCCCCCeEEEEEecCCCchHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-------RLVLVG-NER--RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGA   72 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-------~v~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   72 (266)
                      ++.-+|.|+||+|+||..++..|++...       .+++.| ++.  .++-..-+++...-. .....+   .++..   
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~-~~~~~~---~~~~~---   94 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFP-LLDKVV---VTADP---   94 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCT-TEEEEE---EESCH---
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCcc-CCCcEE---EcCCh---
Confidence            3456899999999999999999987643       688888 432  233344444432111 112222   22211   


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhcc-CCCCeEEEEecc
Q 024517           73 FDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES-KAGGSIVFLTSI  148 (266)
Q Consensus        73 v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~g~iv~iss~  148 (266)
                       ..       .+..-|++|-.||...  +|  .++.+|+   ++.|.    .+++.+.+.+.+. .++..|+.+|.+
T Consensus        95 -~~-------a~~~advVvi~aG~pr--kp--GmtR~DL---l~~Na----~I~~~~~~~i~~~a~~~~~vlvvsNP  152 (345)
T 4h7p_A           95 -RV-------AFDGVAIAIMCGAFPR--KA--GMERKDL---LEMNA----RIFKEQGEAIAAVAASDCRVVVVGNP  152 (345)
T ss_dssp             -HH-------HTTTCSEEEECCCCCC--CT--TCCHHHH---HHHHH----HHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             -HH-------HhCCCCEEEECCCCCC--CC--CCCHHHH---HHHhH----HHHHHHHHHHHhhccCceEEEEeCCC
Confidence             11       2357899999998731  22  3555544   44444    4556666666553 224566677754

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.31  E-value=0.012  Score=49.75  Aligned_cols=44  Identities=18%  Similarity=0.192  Sum_probs=35.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKM   48 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~   48 (266)
                      +..++.|+|+ |.+|.+++..|+..|. +|++.+ ++++++.....+
T Consensus         8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l   53 (331)
T 1pzg_A            8 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDL   53 (331)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHH
Confidence            4457999998 8899999999999998 999999 766666544443

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.31  E-value=0.0051  Score=52.43  Aligned_cols=74  Identities=7%  Similarity=0.061  Sum_probs=48.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|+++||+|+ +++|...++.+...|++|++++ +.++.+...+++      +...   ..|..+.+  .++       +
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l------Ga~~---vi~~~~~~--~~~-------~  240 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL------GADD---YVIGSDQA--KMS-------E  240 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS------CCSC---EEETTCHH--HHH-------H
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc------CCce---eeccccHH--HHH-------H
Confidence            5889999995 8999999998888899999888 554443322122      2221   13444322  222       2


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                      ..+.+|+++.++|.
T Consensus       241 ~~~g~D~vid~~g~  254 (357)
T 2cf5_A          241 LADSLDYVIDTVPV  254 (357)
T ss_dssp             STTTEEEEEECCCS
T ss_pred             hcCCCCEEEECCCC
Confidence            22579999999985

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.28  E-value=0.052  Score=45.38  Aligned_cols=117  Identities=15%  Similarity=0.192  Sum_probs=69.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccC-CCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLK-GGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++.|+|+ |.+|.+++..|+.+|.  .|++.| ++++++.....++.... ...+..+...  .+.+             
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~--~~~~-------------   65 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGT--NDYG-------------   65 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEE--SSSG-------------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEEC--CCHH-------------
Confidence            4788996 9999999999999987  899999 77666655444442210 0123333322  2222             


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                      .+..-|++|.++|.. . .+  .++.   ...+..|    .-+++.+.+.+.+..+++.++++|.+..
T Consensus        66 a~~~aDvVii~ag~~-~-kp--G~~R---~dl~~~N----~~i~~~i~~~i~~~~p~a~vivvtNPvd  122 (314)
T 3nep_X           66 PTEDSDVCIITAGLP-R-SP--GMSR---DDLLAKN----TEIVGGVTEQFVEGSPDSTIIVVANPLD  122 (314)
T ss_dssp             GGTTCSEEEECCCC-----------C---HHHHHHH----HHHHHHHHHHHHTTCTTCEEEECCSSHH
T ss_pred             HhCCCCEEEECCCCC-C-CC--CCCH---HHHHHhh----HHHHHHHHHHHHHhCCCcEEEecCCchh
Confidence            124689999999872 1 11  1222   2233333    3456666666666554788888887643

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.27  E-value=0.013  Score=50.58  Aligned_cols=76  Identities=20%  Similarity=0.258  Sum_probs=49.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .|++|||.|+ +++|...++.+...|+ +|+.++ +++++ +.++++      |.  .  .+|.++.+  .+.+   ++.
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~-~~a~~l------Ga--~--~i~~~~~~--~~~~---~v~  247 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARL-AHAKAQ------GF--E--IADLSLDT--PLHE---QIA  247 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHT------TC--E--EEETTSSS--CHHH---HHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHH-HHHHHc------CC--c--EEccCCcc--hHHH---HHH
Confidence            5789999995 8999999988888899 688877 44433 333332      22  2  24665543  2222   233


Q ss_pred             HHh-C-CCCEEEEcCCC
Q 024517           82 QIL-G-NLDAFVHCYTY   96 (266)
Q Consensus        82 ~~~-g-~id~li~~ag~   96 (266)
                      +.. + .+|++|.++|.
T Consensus       248 ~~t~g~g~Dvvid~~G~  264 (398)
T 1kol_A          248 ALLGEPEVDCAVDAVGF  264 (398)
T ss_dssp             HHHSSSCEEEEEECCCT
T ss_pred             HHhCCCCCCEEEECCCC
Confidence            322 2 69999999986

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.26  E-value=0.0082  Score=51.15  Aligned_cols=81  Identities=12%  Similarity=0.292  Sum_probs=56.3

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cc-------------------cccHHHHHHHhcccCCCCCeEEE
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NE-------------------RRLSSVAEKMMGSLKGGQPVEVV   61 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~-------------------~~~~~~~~~~~~~~~~~~~~~~~   61 (266)
                      +++++|+|.|+ ||+|.++++.|+..|. ++.++| +.                   .+.+..++.+.+.++ ..++..+
T Consensus       116 L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~v~v~~~  193 (353)
T 3h5n_A          116 LKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNS-EISVSEI  193 (353)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT-TSEEEEE
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCC-CCeEEEe
Confidence            45788999988 6799999999999998 788887 32                   244556666666544 2566666


Q ss_pred             EEecCCCchHHHHHHHHHHHHHhCCCCEEEEcCC
Q 024517           62 GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYT   95 (266)
Q Consensus        62 ~~D~~~~~~~~v~~~~~~~~~~~g~id~li~~ag   95 (266)
                      ..+++...  .+.       + +.+.|++|.+..
T Consensus       194 ~~~i~~~~--~~~-------~-~~~~DlVvd~~D  217 (353)
T 3h5n_A          194 ALNINDYT--DLH-------K-VPEADIWVVSAD  217 (353)
T ss_dssp             ECCCCSGG--GGG-------G-SCCCSEEEECCC
T ss_pred             ecccCchh--hhh-------H-hccCCEEEEecC
Confidence            66666543  221       1 457899998763

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.25  E-value=0.0061  Score=49.97  Aligned_cols=35  Identities=11%  Similarity=0.256  Sum_probs=33.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      +++||+++|.|.++-+|+.++..|.++|++|.++.
T Consensus       157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h  191 (285)
T 3p2o_A          157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCH  191 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEEC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEe
Confidence            47899999999999999999999999999999987

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.25  E-value=0.013  Score=50.73  Aligned_cols=77  Identities=16%  Similarity=0.258  Sum_probs=49.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .|++|||+|+ +++|...++.+...|+ +|+.++ +.++++ .++++      +.  .  .+|..+.+  ...+.+.++.
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~l------Ga--~--~i~~~~~~--~~~~~~~~~~  250 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLK-LLSDA------GF--E--TIDLRNSA--PLRDQIDQIL  250 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHH-HHHTT------TC--E--EEETTSSS--CHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHH-HHHHc------CC--c--EEcCCCcc--hHHHHHHHHh
Confidence            5789999996 9999999988888899 899888 444433 22222      22  2  34666544  2112222221


Q ss_pred             HHhC-CCCEEEEcCCC
Q 024517           82 QILG-NLDAFVHCYTY   96 (266)
Q Consensus        82 ~~~g-~id~li~~ag~   96 (266)
                        .+ .+|++|.++|.
T Consensus       251 --~g~g~Dvvid~~g~  264 (398)
T 2dph_A          251 --GKPEVDCGVDAVGF  264 (398)
T ss_dssp             --SSSCEEEEEECSCT
T ss_pred             --CCCCCCEEEECCCC
Confidence              13 59999999986

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.21  E-value=0.0032  Score=51.93  Aligned_cols=35  Identities=9%  Similarity=0.080  Sum_probs=30.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEec
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGN   37 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~   37 (266)
                      ++++|+++|+|+ ||.|++++..|.+.|+ +|+++.|
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nR  154 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTR  154 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEES
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeC
Confidence            467999999998 5899999999999999 8888883

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.17  E-value=0.08  Score=44.28  Aligned_cols=116  Identities=13%  Similarity=0.202  Sum_probs=64.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ++.|+|+ |.+|.+++..|++.|.  +|++.+ ++++++.....+.....-.....+..   ++.+      .       
T Consensus         2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~~------~-------   64 (319)
T 1a5z_A            2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDYA------D-------   64 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCGG------G-------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCHH------H-------
Confidence            5789998 8899999999999998  999999 65656554443322111001122211   2222      1       


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                      ....|++|.+++...  .+  ..+..+   .+..|..    +.+.+.+.+.+..+++.+++++...+
T Consensus        65 ~~~aDvViiav~~~~--~~--g~~r~d---l~~~n~~----i~~~i~~~i~~~~~~~~ii~~tNp~~  120 (319)
T 1a5z_A           65 LKGSDVVIVAAGVPQ--KP--GETRLQ---LLGRNAR----VMKEIARNVSKYAPDSIVIVVTNPVD  120 (319)
T ss_dssp             GTTCSEEEECCCCCC--CS--SCCHHH---HHHHHHH----HHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred             hCCCCEEEEccCCCC--CC--CCCHHH---HHHHHHH----HHHHHHHHHHhhCCCeEEEEeCCcHH
Confidence            136899999997622  11  122222   2233333    34444454443322577777766544

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.15  E-value=0.012  Score=53.38  Aligned_cols=92  Identities=15%  Similarity=0.155  Sum_probs=56.8

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cc-------------------cccHHHHHHHhcccCCCCCeEEE
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NE-------------------RRLSSVAEKMMGSLKGGQPVEVV   61 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~-------------------~~~~~~~~~~~~~~~~~~~~~~~   61 (266)
                      +++++|+|.|++ |+|..+++.|+..|. ++.++| +.                   .+.+..++.+++..+. .++..+
T Consensus       324 L~~arVLIVGaG-GLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~-V~v~~~  401 (615)
T 4gsl_A          324 IKNTKVLLLGAG-TLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPL-MDATGV  401 (615)
T ss_dssp             HHTCEEEEECCS-HHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTT-CEEEEE
T ss_pred             HhCCeEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCC-cEEEEe
Confidence            467889999886 599999999999998 788887 32                   3456666777766542 455555


Q ss_pred             EEecCC-----CchHHHHHHHHHHHHHhCCCCEEEEcCCC
Q 024517           62 GLDMEE-----DREGAFDEAVDKACQILGNLDAFVHCYTY   96 (266)
Q Consensus        62 ~~D~~~-----~~~~~v~~~~~~~~~~~g~id~li~~ag~   96 (266)
                      ..++.-     .+++....-.+.+.+.+...|+||.+..-
T Consensus       402 ~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn  441 (615)
T 4gsl_A          402 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS  441 (615)
T ss_dssp             CCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSS
T ss_pred             eccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCC
Confidence            544410     01001111112233334568999998643

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.13  E-value=0.041  Score=45.87  Aligned_cols=117  Identities=15%  Similarity=0.167  Sum_probs=66.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccC-CCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLK-GGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +++.|+|+ |.+|..++..|+..|. +|++.| ++++++.....+..... ......+...  ++.+      .      
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~------a------   67 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYA------D------   67 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG------G------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CCHH------H------
Confidence            47899998 8999999999999997 888999 77767655555543210 0012222211  2222      1      


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                       +...|++|.++|.. . .+  ..+..+   .+    .-...+.+.+.+.+.+..+++.++++|.+.
T Consensus        68 -~~~aD~Vi~a~g~p-~-~~--g~~r~d---l~----~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv  122 (309)
T 1ur5_A           68 -TANSDVIVVTSGAP-R-KP--GMSRED---LI----KVNADITRACISQAAPLSPNAVIIMVNNPL  122 (309)
T ss_dssp             -GTTCSEEEECCCC------------CH---HH----HHHHHHHHHHHHHHGGGCTTCEEEECCSSH
T ss_pred             -HCCCCEEEEcCCCC-C-CC--CCCHHH---HH----HHHHHHHHHHHHHHHhhCCCeEEEEcCCch
Confidence             24689999999872 2 11  111111   12    223345566666666554356666665543

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.12  E-value=0.032  Score=44.90  Aligned_cols=76  Identities=16%  Similarity=0.142  Sum_probs=55.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHc-CCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            7 RVLLTSDGDEISKNIAFHLAKR-GCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~-g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      +++|.|++|.+|+.+++.+.+. ++.++.+. +.+.+++...   .      ... +.+|++.++  .+...+..+.+. 
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~---~------~~D-vvIDfT~p~--a~~~~~~~a~~~-   68 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD---G------NTE-VVIDFTHPD--VVMGNLEFLIDN-   68 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH---T------TCC-EEEECSCTT--THHHHHHHHHHT-
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc---c------CCc-EEEEccChH--HHHHHHHHHHHc-
Confidence            5899999999999999999876 88888655 5544444322   1      122 557999999  887777776654 


Q ss_pred             CCCCEEEEcCCC
Q 024517           85 GNLDAFVHCYTY   96 (266)
Q Consensus        85 g~id~li~~ag~   96 (266)
                       ++++++-..|+
T Consensus        69 -g~~~VigTTG~   79 (245)
T 1p9l_A           69 -GIHAVVGTTGF   79 (245)
T ss_dssp             -TCEEEECCCCC
T ss_pred             -CCCEEEcCCCC
Confidence             68888887764

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.10  E-value=0.012  Score=50.74  Aligned_cols=41  Identities=12%  Similarity=0.054  Sum_probs=34.3

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSV   44 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~   44 (266)
                      +.+++++|+|+ |++|+.+++.+...|++|++++ +.++.+..
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          170 VPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            46899999996 7899999999999999988888 55555443

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.09  E-value=0.012  Score=48.01  Aligned_cols=34  Identities=9%  Similarity=0.221  Sum_probs=32.2

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      +.||+++|.|.+.-+|+.++..|.++|++|.++.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~  181 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCH  181 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEEC
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEe
Confidence            5799999999999999999999999999999986

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.09  E-value=0.13  Score=42.40  Aligned_cols=117  Identities=14%  Similarity=0.154  Sum_probs=72.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCC-CCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKG-GQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++.|+|+ |+||..+|..|..++.  ++++.| ++++.+-.+..+...... .........  .|.+  .          
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~--~----------   66 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS--L----------   66 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGG--G----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHH--H----------
Confidence            3778895 9999999999998875  799999 766666555555432110 122333322  1222  1          


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                       +..-|++|-.||...  +|  .++.+|+   ++.|.    .+++.+.+.+.+...++.++.+|.+.-
T Consensus        67 -~~~aDvVvitAG~pr--kp--GmtR~dL---l~~Na----~I~~~i~~~i~~~~p~aivlvvsNPvd  122 (294)
T 2x0j_A           67 -LKGSEIIVVTAGLAR--KP--GMTRLDL---AHKNA----GIIKDIAKKIVENAPESKILVVTNPMD  122 (294)
T ss_dssp             -GTTCSEEEECCCCCC--CS--SSCHHHH---HHHHH----HHHHHHHHHHHTTSTTCEEEECSSSHH
T ss_pred             -hCCCCEEEEecCCCC--CC--CCchHHH---HHHHH----HHHHHHHHHHHhcCCceEEEEecCcch
Confidence             236799999999732  21  3455443   44443    466777777666655688888887543

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.06  E-value=0.0099  Score=48.57  Aligned_cols=42  Identities=19%  Similarity=0.344  Sum_probs=36.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKM   48 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~   48 (266)
                      +|+++|.|+ ||.|++++..|.+.|.+|+++. +.++.++++ ++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~  160 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL  160 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence            789999997 7899999999999999999998 666766666 44

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.02  E-value=0.011  Score=48.40  Aligned_cols=35  Identities=11%  Similarity=0.315  Sum_probs=33.0

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      +++||+++|.|.++-+|+.++..|...|++|.++.
T Consensus       158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~h  192 (286)
T 4a5o_A          158 DLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTH  192 (286)
T ss_dssp             CCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEEC
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEe
Confidence            47899999999999899999999999999999987

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.02  E-value=0.094  Score=43.66  Aligned_cols=117  Identities=12%  Similarity=0.171  Sum_probs=70.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccC-CCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLK-GGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ++.|+|+ |.+|..++..++.+|. .|++.| +.++++.....+..... ......+...  ++.+      .       
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~------a-------   64 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NSYE------D-------   64 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SCGG------G-------
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CCHH------H-------
Confidence            3678998 8999999999999887 699999 77767665555543210 0112222221  1212      1       


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                      +...|++|..+|.. . .+  ..+..++   +    .-..-+.+.+.+.+.+..+++.++++|.+..
T Consensus        65 ~~~aD~Vi~~ag~~-~-k~--G~~r~dl---~----~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~  120 (308)
T 2d4a_B           65 MRGSDIVLVTAGIG-R-KP--GMTREQL---L----EANANTMADLAEKIKAYAKDAIVVITTNPVD  120 (308)
T ss_dssp             GTTCSEEEECCSCC-C-CS--SCCTHHH---H----HHHHHHHHHHHHHHHHHCTTCEEEECCSSHH
T ss_pred             hCCCCEEEEeCCCC-C-CC--CCcHHHH---H----HHHHHHHHHHHHHHHHHCCCeEEEEeCCchH
Confidence            24689999999872 2 21  2333322   2    2334456666666655444688888877543

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.02  E-value=0.0053  Score=48.96  Aligned_cols=71  Identities=15%  Similarity=0.097  Sum_probs=48.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      .+.++|.|+ +.+|+.+++.|.++|+ |++++ +++..++.    . .     .+.++..|.++.+  .++++      .
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~----~-~-----~~~~i~gd~~~~~--~l~~a------~   68 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVL----R-S-----GANFVHGDPTRVS--DLEKA------N   68 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHH----H-T-----TCEEEESCTTCHH--HHHHT------T
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHH----h-c-----CCeEEEcCCCCHH--HHHhc------C
Confidence            457889987 7899999999999999 88888 54443332    2 1     3567778888765  33322      1


Q ss_pred             hCCCCEEEEcCC
Q 024517           84 LGNLDAFVHCYT   95 (266)
Q Consensus        84 ~g~id~li~~ag   95 (266)
                      ..+.|.+|.+.+
T Consensus        69 i~~ad~vi~~~~   80 (234)
T 2aef_A           69 VRGARAVIVDLE   80 (234)
T ss_dssp             CTTCSEEEECCS
T ss_pred             cchhcEEEEcCC
Confidence            235788887753

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.00  E-value=0.0081  Score=46.99  Aligned_cols=40  Identities=28%  Similarity=0.397  Sum_probs=32.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAE   46 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~   46 (266)
                      +++|+||+|.+|.++++.|+++|++|++++ +.++.++..+
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~   42 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAA   42 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            588999999999999999999999999988 4455544443

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=95.98  E-value=0.07  Score=44.75  Aligned_cols=153  Identities=12%  Similarity=0.118  Sum_probs=80.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccC-CCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLK-GGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .+++.|+|+ |.+|..++..|+..|. +|++.| ++++++.....+..... ......+...  +|.+      .     
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d~~------a-----   69 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS--NTYD------D-----   69 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE--CCGG------G-----
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC--CCHH------H-----
Confidence            357889998 8899999999999998 999999 77777655555543210 0012222111  1211      1     


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCC-CCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc------C
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQ-VGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER------G  154 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~------~  154 (266)
                        +...|++|.++|.....+...+ ....+   .+    .-..-+.+.+.+.+.+..+++.++++|...+...      .
T Consensus        70 --l~~aD~Vi~a~g~p~k~g~~~qe~~r~d---l~----~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~~t~~~~~~~  140 (322)
T 1t2d_A           70 --LAGADVVIVTAGFTKAPGKSDKEWNRDD---LL----PLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMVQLLHQHS  140 (322)
T ss_dssp             --GTTCSEEEECCSCSSCTTCCSTTCCGGG---GH----HHHHHHHHHHHHHHHHHCTTSEEEECSSSHHHHHHHHHHHH
T ss_pred             --hCCCCEEEEeCCCCCCCCCCcccccHHH---HH----HHHHHHHHHHHHHHHHHCCCeEEEEecCChHHHHHHHHHhc
Confidence              2467999999986221110000 00111   11    2223345555555554433577777766543211      0


Q ss_pred             CCCCchhhHHhHHHHHH--HHHHHHHHhC
Q 024517          155 LYPGAAAYGACAASIHQ--LVRTAAMEIG  181 (266)
Q Consensus       155 ~~~~~~~y~~sK~a~~~--~~~~la~e~~  181 (266)
                      .++.....+.. ..+.+  |-..+++.++
T Consensus       141 g~~~~rviG~g-t~ld~~R~~~~la~~lg  168 (322)
T 1t2d_A          141 GVPKNKIIGLG-GVLDTSRLKYYISQKLN  168 (322)
T ss_dssp             CCCGGGEEECC-HHHHHHHHHHHHHHHHT
T ss_pred             CCChHHEEecc-CcccHHHHHHHHHHHhC
Confidence            01222223332 34444  6667777765

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.92  E-value=0.012  Score=46.65  Aligned_cols=35  Identities=17%  Similarity=0.368  Sum_probs=32.0

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      +++++|.+||.||+ .+|...++.|++.|++|++++
T Consensus        27 l~L~gk~VLVVGgG-~va~~ka~~Ll~~GA~VtVva   61 (223)
T 3dfz_A           27 LDLKGRSVLVVGGG-TIATRRIKGFLQEGAAITVVA   61 (223)
T ss_dssp             ECCTTCCEEEECCS-HHHHHHHHHHGGGCCCEEEEC
T ss_pred             EEcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEC
Confidence            36899999999987 599999999999999999988

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=95.91  E-value=0.039  Score=46.55  Aligned_cols=99  Identities=12%  Similarity=0.129  Sum_probs=61.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHc-CCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKR-GCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~-g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .|+++||+|+ +++|...++.+... |++|+.++ ++++. +..+++      |... +  .|..+ +  ..    +++.
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~-~~~~~l------Ga~~-~--i~~~~-~--~~----~~v~  232 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRL-ALAREV------GADA-A--VKSGA-G--AA----DAIR  232 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHH-HHHHHT------TCSE-E--EECST-T--HH----HHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHHHc------CCCE-E--EcCCC-c--HH----HHHH
Confidence            5789999998 89999988877777 67999988 44433 344443      2222 1  23332 3  22    2233


Q ss_pred             HHh--CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           82 QIL--GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        82 ~~~--g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                      +..  .++|+++.++|..                          ...+.++..++.   +|+++.++...
T Consensus       233 ~~t~g~g~d~v~d~~G~~--------------------------~~~~~~~~~l~~---~G~iv~~G~~~  273 (345)
T 3jv7_A          233 ELTGGQGATAVFDFVGAQ--------------------------STIDTAQQVVAV---DGHISVVGIHA  273 (345)
T ss_dssp             HHHGGGCEEEEEESSCCH--------------------------HHHHHHHHHEEE---EEEEEECSCCT
T ss_pred             HHhCCCCCeEEEECCCCH--------------------------HHHHHHHHHHhc---CCEEEEECCCC
Confidence            322  2699999999751                          134445555554   68999887643

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=95.89  E-value=0.035  Score=47.95  Aligned_cols=41  Identities=7%  Similarity=0.041  Sum_probs=34.0

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSV   44 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~   44 (266)
                      +.+.+|+|+|+ |.+|..+++.+...|++|++++ +.++++..
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~  229 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQV  229 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            35788999999 5799999999999999999999 65554443

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=95.88  E-value=0.0041  Score=51.15  Aligned_cols=40  Identities=23%  Similarity=0.180  Sum_probs=33.4

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLS   42 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~   42 (266)
                      ++++|+++|+|+ ||+|++++..|.+.|+ +|++++ +.++.+
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~  155 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFN  155 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGT
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHH
Confidence            467899999997 6899999999999999 898888 444433

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.85  E-value=0.0068  Score=50.69  Aligned_cols=35  Identities=17%  Similarity=0.281  Sum_probs=32.6

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      ++.+++++|.|++.=+|+.+|+.|+..|++|.+++
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~n  208 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVD  208 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEEC
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEe
Confidence            47899999999998889999999999999999987

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=95.84  E-value=0.22  Score=42.56  Aligned_cols=120  Identities=15%  Similarity=0.205  Sum_probs=69.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC--e---EEEEe-cccc----cHHHHHHHhcccCCCCCeEEEEEecCCCchHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC--R---LVLVG-NERR----LSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAF   73 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~--~---v~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v   73 (266)
                      +..+|.|+||+|+||.+++..++..+.  .   +++.+ +.+.    ++-.+..++....  .-..  .+.+...+    
T Consensus        31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~--p~~~--~v~i~~~~----  102 (375)
T 7mdh_A           31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLY--PLLR--EVSIGIDP----  102 (375)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC--TTEE--EEEEESCH----
T ss_pred             CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhh--hhcC--CcEEecCC----
Confidence            346799999999999999999998865  2   77765 4444    3334444443210  0111  12222211    


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhcc-CCCCeEEEEeccc
Q 024517           74 DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES-KAGGSIVFLTSII  149 (266)
Q Consensus        74 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~g~iv~iss~~  149 (266)
                             .+.+..-|++|..+|.. . ++  .++..   ..++.|.    .+++...+.+.+. .+++.++.+|...
T Consensus       103 -------y~~~~daDvVVitag~p-r-kp--G~tR~---DLl~~N~----~I~k~i~~~i~~~a~p~~ivlVvsNPv  161 (375)
T 7mdh_A          103 -------YEVFEDVDWALLIGAKP-R-GP--GMERA---ALLDING----QIFADQGKALNAVASKNVKVLVVGNPC  161 (375)
T ss_dssp             -------HHHTTTCSEEEECCCCC-C-CT--TCCHH---HHHHHHH----HHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred             -------HHHhCCCCEEEEcCCCC-C-CC--CCCHH---HHHHHHH----HHHHHHHHHHHHhcCCCeEEEEecCch
Confidence                   11234789999998862 1 11  24443   3344443    4566666666653 3368888888753

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=95.82  E-value=0.2  Score=41.85  Aligned_cols=121  Identities=20%  Similarity=0.232  Sum_probs=70.0

Q ss_pred             CCC-CCcEEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCC-CCCeEEEEEecCCCchHHHHH
Q 024517            1 MEN-QAKRVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKG-GQPVEVVGLDMEEDREGAFDE   75 (266)
Q Consensus         1 m~l-~~k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~v~~   75 (266)
                      |+- ..+++.|+|+ |.+|..++..++.+|.  +|++.| +.++++.....+...... +..+.+..   .+.+      
T Consensus         1 m~~~~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~---~~~~------   70 (316)
T 1ldn_A            1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH---GDYD------   70 (316)
T ss_dssp             CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE---CCGG------
T ss_pred             CCCCCCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc---CcHH------
Confidence            543 3458999999 8899999999998885  799999 655455444444432211 11333332   1212      


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           76 AVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        76 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                      .       +..-|++|.+++......    .+..+   .+..|    .-+.+.+.+.+.+..+++.++++|.+.
T Consensus        71 a-------l~~aDvViia~~~~~~~g----~~r~d---l~~~n----~~i~~~i~~~i~~~~p~a~~iv~tNPv  126 (316)
T 1ldn_A           71 D-------CRDADLVVICAGANQKPG----ETRLD---LVDKN----IAIFRSIVESVMASGFQGLFLVATNPV  126 (316)
T ss_dssp             G-------TTTCSEEEECCSCCCCTT----TCSGG---GHHHH----HHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred             H-------hCCCCEEEEcCCCCCCCC----CCHHH---HHHcC----hHHHHHHHHHHHHHCCCCEEEEeCCch
Confidence            1       246899999998732111    12111   12222    345566666665544357777776643

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=95.82  E-value=0.02  Score=47.74  Aligned_cols=68  Identities=16%  Similarity=0.163  Sum_probs=45.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      .|+++||+|+ +++|...++.+...|++|+.+++.++. +..+++      |.. .++  |  |.+  .+          
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~-~~~~~l------Ga~-~v~--~--d~~--~v----------  196 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVSASLSQ-ALAAKR------GVR-HLY--R--EPS--QV----------  196 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSCCH-HHHHHH------TEE-EEE--S--SGG--GC----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEEChhhH-HHHHHc------CCC-EEE--c--CHH--Hh----------
Confidence            5889999999 999999999888899999988844444 444444      221 122  2  222  22          


Q ss_pred             hCCCCEEEEcCCC
Q 024517           84 LGNLDAFVHCYTY   96 (266)
Q Consensus        84 ~g~id~li~~ag~   96 (266)
                      .+++|+++.++|.
T Consensus       197 ~~g~Dvv~d~~g~  209 (315)
T 3goh_A          197 TQKYFAIFDAVNS  209 (315)
T ss_dssp             CSCEEEEECC---
T ss_pred             CCCccEEEECCCc
Confidence            3579999999875

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.75  E-value=0.014  Score=47.79  Aligned_cols=35  Identities=6%  Similarity=0.126  Sum_probs=32.6

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      +++||+++|.|.++-+|+.++..|..+|++|.++.
T Consensus       158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~h  192 (285)
T 3l07_A          158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCH  192 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEEC
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEe
Confidence            47899999999999899999999999999999886

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=95.75  E-value=0.43  Score=39.75  Aligned_cols=117  Identities=16%  Similarity=0.202  Sum_probs=67.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHc-C--CeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKR-G--CRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~-g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ++.|+||+|.+|.+++..|.++ +  ..++++|..++.+.....++.. +  ....+... .++.+    ...+      
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~-~--~~~~v~~~-~~~~~----~~~~------   67 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHI-P--TAVKIKGF-SGEDA----TPAL------   67 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTS-C--SSEEEEEE-CSSCC----HHHH------
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCC-C--CCceEEEe-cCCCc----HHHh------
Confidence            5889999999999999999886 5  3788999333444444455432 1  12222211 11111    1122      


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                       ...|++|..+|..  .++  .++.   ...++.|..    +++.+.+.+.+..+++.++++|.+.
T Consensus        68 -~~aDivii~ag~~--rkp--G~~R---~dll~~N~~----I~~~i~~~i~~~~p~a~vlvvtNPv  121 (312)
T 3hhp_A           68 -EGADVVLISAGVA--RKP--GMDR---SDLFNVNAG----IVKNLVQQVAKTCPKACIGIITNPV  121 (312)
T ss_dssp             -TTCSEEEECCSCS--CCT--TCCH---HHHHHHHHH----HHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred             -CCCCEEEEeCCCC--CCC--CCCH---HHHHHHHHH----HHHHHHHHHHHHCCCcEEEEecCcc
Confidence             4689999999862  111  2344   334444544    4444445444443368888888654

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.73  E-value=0.02  Score=47.03  Aligned_cols=35  Identities=9%  Similarity=0.291  Sum_probs=32.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      ++.||+++|.|++.-+|+.+++.|.+.|++|.+++
T Consensus       156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~h  190 (288)
T 1b0a_A          156 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTH  190 (288)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEEC
T ss_pred             CCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEe
Confidence            47899999999999899999999999999999987

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=95.70  E-value=0.13  Score=42.98  Aligned_cols=42  Identities=21%  Similarity=0.319  Sum_probs=33.7

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSV   44 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~   44 (266)
                      |. +.+++.|+|+ |.+|.+++..|++.|. +|++.+ ++++++..
T Consensus         1 M~-~~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~   44 (317)
T 2ewd_A            1 MI-ERRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGK   44 (317)
T ss_dssp             CC-CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHH
T ss_pred             CC-CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHH
Confidence            44 2457889998 7899999999999998 999999 66655553

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=95.65  E-value=0.026  Score=49.65  Aligned_cols=49  Identities=18%  Similarity=0.150  Sum_probs=38.1

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhc
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMG   50 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~   50 (266)
                      |++++|+++|.|. ++.|.++|+.|.++|++|.+.| +........+.+.+
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~   54 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLE   54 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHH
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHh
Confidence            4578999999999 6789999999999999999999 54333334445543

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.64  E-value=0.018  Score=47.50  Aligned_cols=36  Identities=19%  Similarity=0.285  Sum_probs=33.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      +++||+++|.|.++-+|+.++..|.+.|++|.++.+
T Consensus       162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~  197 (300)
T 4a26_A          162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHS  197 (300)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC
Confidence            478999999999998999999999999999999873

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=95.63  E-value=0.014  Score=49.02  Aligned_cols=41  Identities=22%  Similarity=0.249  Sum_probs=33.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKM   48 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~   48 (266)
                      ++||+||++++|..+++.+...|++|+.++ +.++++ ..+++
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~-~~~~l  194 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAAD-YLKQL  194 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHH-HHHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHc
Confidence            799999999999999999989999999888 555543 34443

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=95.60  E-value=0.025  Score=51.21  Aligned_cols=61  Identities=16%  Similarity=0.213  Sum_probs=43.9

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-c-------------------ccccHHHHHHHhcccCCCCCeEEE
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-N-------------------ERRLSSVAEKMMGSLKGGQPVEVV   61 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~-------------------~~~~~~~~~~~~~~~~~~~~~~~~   61 (266)
                      +++++|+|.|++ |+|.++++.|+..|. ++.++| +                   ..+.+..++.+++..+. .++..+
T Consensus       325 L~~~kVLIVGaG-GLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~-v~v~~~  402 (598)
T 3vh1_A          325 IKNTKVLLLGAG-TLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPL-MDATGV  402 (598)
T ss_dssp             HHTCEEEEECCS-HHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTT-CEEEEE
T ss_pred             HhCCeEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCC-cEEEEE
Confidence            457889999876 599999999999998 788886 3                   13556677777766542 455555


Q ss_pred             EEec
Q 024517           62 GLDM   65 (266)
Q Consensus        62 ~~D~   65 (266)
                      ..++
T Consensus       403 ~~~I  406 (598)
T 3vh1_A          403 KLSI  406 (598)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            5443

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.50  E-value=0.017  Score=50.29  Aligned_cols=39  Identities=13%  Similarity=0.300  Sum_probs=31.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSV   44 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~   44 (266)
                      +..++|.|. |.+|..+++.|.++|.+|++++ +++..+..
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~   43 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETL   43 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
Confidence            346888887 6699999999999999999999 66554443

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=95.49  E-value=0.12  Score=42.39  Aligned_cols=42  Identities=19%  Similarity=0.276  Sum_probs=33.7

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEK   47 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~   47 (266)
                      -+++.|.|+ |.+|..+|..|+++|++|++.+ +++.+++..+.
T Consensus         4 ~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            4 ITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            357777776 6699999999999999999999 66666665544

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.47  E-value=0.021  Score=47.17  Aligned_cols=35  Identities=3%  Similarity=-0.005  Sum_probs=32.8

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      ++.||+++|.|++.-+|+.+++.|...|++|.+++
T Consensus       162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~h  196 (301)
T 1a4i_A          162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCH  196 (301)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEEC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEE
Confidence            47899999999999899999999999999999987

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=95.46  E-value=0.018  Score=48.23  Aligned_cols=73  Identities=14%  Similarity=0.086  Sum_probs=48.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ++ +||+|+++++|...++.+...|++|+.++ ++++.+ ..+++      |....   .|..+.+  .    ++++  .
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~-~~~~l------Ga~~v---i~~~~~~--~----~~~~--~  208 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHG-YLKSL------GANRI---LSRDEFA--E----SRPL--E  208 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH-HHHHH------TCSEE---EEGGGSS--C----CCSS--C
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHhc------CCCEE---EecCCHH--H----HHhh--c
Confidence            45 99999999999999999999999999998 555544 44444      22222   2555444  2    1111  1


Q ss_pred             hCCCCEEEEcCCC
Q 024517           84 LGNLDAFVHCYTY   96 (266)
Q Consensus        84 ~g~id~li~~ag~   96 (266)
                      .+++|+++.++|.
T Consensus       209 ~~~~d~v~d~~g~  221 (324)
T 3nx4_A          209 KQLWAGAIDTVGD  221 (324)
T ss_dssp             CCCEEEEEESSCH
T ss_pred             CCCccEEEECCCc
Confidence            1468999998763

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=95.41  E-value=0.12  Score=42.23  Aligned_cols=85  Identities=13%  Similarity=0.149  Sum_probs=55.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCC---eEEEEe-cccccHHHHHHHh--------cccCCCCCeEEEEEecCCCchHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGC---RLVLVG-NERRLSSVAEKMM--------GSLKGGQPVEVVGLDMEEDREGA   72 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~---~v~~~~-~~~~~~~~~~~~~--------~~~~~~~~~~~~~~D~~~~~~~~   72 (266)
                      .+++.|.|+ |.+|.+++..|.+.|+   +|++.+ ++++.+++.++..        +... ..++.++.+   .+.  .
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~-~aDvVilav---~p~--~   75 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGAL-NADVVVLAV---KPH--Q   75 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHS-SCSEEEECS---CGG--G
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHh-cCCeEEEEe---CHH--H
Confidence            467888887 6799999999999998   899998 6666665554321        0011 234444443   344  6


Q ss_pred             HHHHHHHHHHH-hCCCCEEEEcCCC
Q 024517           73 FDEAVDKACQI-LGNLDAFVHCYTY   96 (266)
Q Consensus        73 v~~~~~~~~~~-~g~id~li~~ag~   96 (266)
                      +..+++++... ..+=.++|++++.
T Consensus        76 ~~~vl~~l~~~~l~~~~iiiS~~ag  100 (280)
T 3tri_A           76 IKMVCEELKDILSETKILVISLAVG  100 (280)
T ss_dssp             HHHHHHHHHHHHHTTTCEEEECCTT
T ss_pred             HHHHHHHHHhhccCCCeEEEEecCC
Confidence            77888887765 5332378877654

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.35  E-value=0.01  Score=52.42  Aligned_cols=55  Identities=16%  Similarity=0.329  Sum_probs=41.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCc
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDR   69 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   69 (266)
                      -+++|.|++ .+|..+|+.|.++|++|++++ ++++.+.+.+.+        .+.++..|-++++
T Consensus         4 M~iiI~G~G-~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~--------~~~~i~Gd~~~~~   59 (461)
T 4g65_A            4 MKIIILGAG-QVGGTLAENLVGENNDITIVDKDGDRLRELQDKY--------DLRVVNGHASHPD   59 (461)
T ss_dssp             EEEEEECCS-HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS--------SCEEEESCTTCHH
T ss_pred             CEEEEECCC-HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc--------CcEEEEEcCCCHH
Confidence            467888876 499999999999999999999 666665554442        4556667777665

>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}

Probab=95.29  E-value=0.18  Score=44.27  Aligned_cols=129  Identities=8%  Similarity=0.040  Sum_probs=71.2

Q ss_pred             CCCCCcEEEEecCCC-chHHHHHHHHHH----cCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHH
Q 024517            1 MENQAKRVLLTSDGD-EISKNIAFHLAK----RGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFD   74 (266)
Q Consensus         1 m~l~~k~vlItGa~~-giG~~ia~~l~~----~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~   74 (266)
                      |.+++.++.|.||++ |.|.+++..|+.    .| +|++.| ++++++.... +.+....      ....++-..  +.+
T Consensus         1 m~m~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~-~~~~l~~------~~~~I~~Tt--D~~   70 (450)
T 3fef_A            1 MSLDQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEV-IGNHSGN------GRWRYEAVS--TLK   70 (450)
T ss_dssp             --CCCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHH-HHTTSTT------SCEEEEEES--SHH
T ss_pred             CCCCCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHH-HHHHHhc------cCCeEEEEC--CHH
Confidence            667778888888877 479999999997    46 899999 6666555432 3322221      111222222  233


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCCCC----------C-CCC----CCCC-HHHHHHHHHccchHHHHHHHHHHHHHhccCC
Q 024517           75 EAVDKACQILGNLDAFVHCYTYEGK----------M-QDP----LQVG-EDEFKKLVKINFVAPWFLLKAVGRRMKESKA  138 (266)
Q Consensus        75 ~~~~~~~~~~g~id~li~~ag~~~~----------~-~~~----~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  138 (266)
                      +++       ..-|+||..+.....          . ...    .++. .-.+-.     .+...-+.+.+.+.+.+...
T Consensus        71 eAl-------~dADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~-----alr~~~i~~~i~~~i~~~~p  138 (450)
T 3fef_A           71 KAL-------SAADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIR-----GLRAVPIFAEIARAIRDYAP  138 (450)
T ss_dssp             HHH-------TTCSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHH-----HHHHHHHHHHHHHHHHHHCT
T ss_pred             HHh-------cCCCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhc-----ccccHHHHHHHHHHHHHHCC
Confidence            344       367999999854110          0 000    0110 000000     11234456666777776555


Q ss_pred             CCeEEEEeccccc
Q 024517          139 GGSIVFLTSIIGA  151 (266)
Q Consensus       139 ~g~iv~iss~~~~  151 (266)
                      ++-++++|.+...
T Consensus       139 ~a~~i~~tNPvdi  151 (450)
T 3fef_A          139 ESWVINYTNPMSV  151 (450)
T ss_dssp             TSEEEECCSSHHH
T ss_pred             CeEEEEecCchHH
Confidence            7899999987653

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.28  E-value=0.024  Score=46.99  Aligned_cols=35  Identities=14%  Similarity=0.101  Sum_probs=31.8

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      ++.+++++|.|+ |+||+++++.+...|++|++.++
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~  188 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGAR  188 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEEC
Confidence            578999999996 78999999999999999999883

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=95.24  E-value=0.42  Score=39.65  Aligned_cols=36  Identities=22%  Similarity=0.464  Sum_probs=30.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLS   42 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~   42 (266)
                      .++.|.|+ |.+|..++..|++.|.  +|++++ +.++.+
T Consensus         8 mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~   46 (319)
T 1lld_A            8 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVE   46 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHH
Confidence            47899998 8899999999999998  999999 444444

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=95.23  E-value=0.034  Score=47.08  Aligned_cols=76  Identities=12%  Similarity=0.179  Sum_probs=46.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcC-CeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRG-CRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|+++||+|+++++|...++.....| .+|+.+++.++.+.. . +      +... +  .| .+.+  -.+ .+.++  
T Consensus       142 ~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~~~~~~~~-~-~------ga~~-~--~~-~~~~--~~~-~~~~~--  204 (349)
T 4a27_A          142 EGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAI-K-D------SVTH-L--FD-RNAD--YVQ-EVKRI--  204 (349)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEECGGGHHHH-G-G------GSSE-E--EE-TTSC--HHH-HHHHH--
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCCHHHHHHH-H-c------CCcE-E--Ec-CCcc--HHH-HHHHh--
Confidence            57899999999999999888766665 577777654443322 1 2      1221 1  34 4444  222 22222  


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                      .-+.+|+++.++|.
T Consensus       205 ~~~g~Dvv~d~~g~  218 (349)
T 4a27_A          205 SAEGVDIVLDCLCG  218 (349)
T ss_dssp             CTTCEEEEEEECC-
T ss_pred             cCCCceEEEECCCc
Confidence            12469999999875

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=95.22  E-value=0.18  Score=42.27  Aligned_cols=146  Identities=12%  Similarity=0.128  Sum_probs=78.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhccc---CCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSL---KGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++.|+|+ |.+|..++..|+..|. +|++.| ++++++.....+....   ....++... .|   .+      .    
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d---~~------a----   79 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NN---YE------Y----   79 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC---GG------G----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CC---HH------H----
Confidence            47899998 8899999999999998 999999 7666665443332211   111122211 12   12      1    


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc------C
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER------G  154 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~------~  154 (266)
                         +...|++|.++|...  .+  ..+..+   .+    .-..-+.+.+.+.+.+..+++.++++|.......      .
T Consensus        80 ---l~~aD~VI~avg~p~--k~--g~tr~d---l~----~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~~~t~~~~~~~  145 (328)
T 2hjr_A           80 ---LQNSDVVIITAGVPR--KP--NMTRSD---LL----TVNAKIVGSVAENVGKYCPNAFVICITNPLDAMVYYFKEKS  145 (328)
T ss_dssp             ---GTTCSEEEECCSCCC--CT--TCCSGG---GH----HHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHH
T ss_pred             ---HCCCCEEEEcCCCCC--CC--CCchhh---HH----hhhHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHHHHhc
Confidence               246799999998622  11  111111   11    2223345555555554333567777766543211      0


Q ss_pred             CCCCchhhHHhHHHHHH--HHHHHHHHhC
Q 024517          155 LYPGAAAYGACAASIHQ--LVRTAAMEIG  181 (266)
Q Consensus       155 ~~~~~~~y~~sK~a~~~--~~~~la~e~~  181 (266)
                      .++..-..+.. .-+.+  +-..+++.++
T Consensus       146 ~~~~~rviG~~-t~Ld~~R~~~~la~~lg  173 (328)
T 2hjr_A          146 GIPANKVCGMS-GVLDSARFRCNLSRALG  173 (328)
T ss_dssp             CCCGGGEEESC-HHHHHHHHHHHHHHHHT
T ss_pred             CCChhhEEEeC-cHHHHHHHHHHHHHHhC
Confidence            01222233333 33433  6667777665

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=95.21  E-value=0.022  Score=50.35  Aligned_cols=166  Identities=11%  Similarity=0.134  Sum_probs=89.4

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHc-----CCeEEEEe-cccccHHHHHHHhccc-C-CCCCeEEEEEecCCCchHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKR-----GCRLVLVG-NERRLSSVAEKMMGSL-K-GGQPVEVVGLDMEEDREGAFD   74 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~-----g~~v~~~~-~~~~~~~~~~~~~~~~-~-~~~~~~~~~~D~~~~~~~~v~   74 (266)
                      ++..++.|.||++..|.+++..|+++     +.+|++.| ++++++... .+...+ + .+....+...  +|     ..
T Consensus        26 m~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~-~~~~~~l~~~~~~~~I~~t--~D-----~~   97 (472)
T 1u8x_X           26 KKSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIA-GACDVFIREKAPDIEFAAT--TD-----PE   97 (472)
T ss_dssp             CCCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHH-HHHHHHHHHHCTTSEEEEE--SC-----HH
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHH-HHHHHHhccCCCCCEEEEE--CC-----HH
Confidence            44568899999887788899999988     56899999 666655533 222111 1 0122232221  12     11


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHcc----------------chHHHHHHHHHHHHHhccCC
Q 024517           75 EAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKIN----------------FVAPWFLLKAVGRRMKESKA  138 (266)
Q Consensus        75 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n----------------~~~~~~l~~~~~~~~~~~~~  138 (266)
                      +.+       ..-|+||..++.. .      ......+..+..+                ....+-+.+.+.+.+.+..+
T Consensus        98 eal-------~~AD~VViaag~~-~------~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P  163 (472)
T 1u8x_X           98 EAF-------TDVDFVMAHIRVG-K------YAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSP  163 (472)
T ss_dssp             HHH-------SSCSEEEECCCTT-H------HHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             HHH-------cCCCEEEEcCCCc-c------ccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCC
Confidence            223       3679999999762 1      0011111111111                23334456677777776655


Q ss_pred             CCeEEEEecccccccCC----CCCchhhHHhHHHHHHHHHHHHHHhCC---CCcEEEEEe
Q 024517          139 GGSIVFLTSIIGAERGL----YPGAAAYGACAASIHQLVRTAAMEIGK---HKIRVNGIA  191 (266)
Q Consensus       139 ~g~iv~iss~~~~~~~~----~~~~~~y~~sK~a~~~~~~~la~e~~~---~~i~v~~v~  191 (266)
                      ++-++++|.+.+.....    .|..-..+.. ..+..|.+.+++.++-   +.|++..+.
T Consensus       164 ~A~ii~~TNPvdi~T~~~~k~~p~~rViG~c-~~~~r~~~~la~~lgv~~~~~v~~~v~G  222 (472)
T 1u8x_X          164 DAWMLNYSNPAAIVAEATRRLRPNSKILNIC-DMPVGIEDRMAQILGLSSRKEMKVRYYG  222 (472)
T ss_dssp             TCEEEECCSCHHHHHHHHHHHSTTCCEEECC-SHHHHHHHHHHHHHTCSCGGGEEEEEEE
T ss_pred             CeEEEEeCCcHHHHHHHHHHhCCCCCEEEeC-CcHHHHHHHHHHHhCcCchhceeEEEec
Confidence            78888888876542100    0111111211 1345677778777752   456654444

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.16  E-value=0.011  Score=48.54  Aligned_cols=35  Identities=23%  Similarity=0.428  Sum_probs=30.7

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      ++++++++|.|+ |++|++++..|.+.|++|+++++
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r  160 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNR  160 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECS
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEEC
Confidence            457899999996 68999999999999998888873

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=95.15  E-value=0.051  Score=45.79  Aligned_cols=79  Identities=13%  Similarity=0.052  Sum_probs=50.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEE-EEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLV-LVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|+++||.|+ +++|...++.+...|+.++ ++++.++..+.++++      |...   ..|.++.+  . .+..+++. 
T Consensus       160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l------Ga~~---~i~~~~~~--~-~~~~~~~~-  225 (346)
T 4a2c_A          160 ENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF------GAMQ---TFNSSEMS--A-PQMQSVLR-  225 (346)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT------TCSE---EEETTTSC--H-HHHHHHHG-
T ss_pred             CCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc------CCeE---EEeCCCCC--H-HHHHHhhc-
Confidence            5889999987 8899999998889999764 555443333444443      2222   24666655  2 22333322 


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                      ..+..|+++.++|.
T Consensus       226 ~~~g~d~v~d~~G~  239 (346)
T 4a2c_A          226 ELRFNQLILETAGV  239 (346)
T ss_dssp             GGCSSEEEEECSCS
T ss_pred             ccCCcccccccccc
Confidence            23568999999875

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=95.06  E-value=0.098  Score=44.18  Aligned_cols=34  Identities=15%  Similarity=0.146  Sum_probs=30.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      ++.||++.|.|. |.||+++|+.+...|++|+..+
T Consensus       168 ~l~gktiGIIGl-G~IG~~vA~~l~~~G~~V~~~d  201 (340)
T 4dgs_A          168 SPKGKRIGVLGL-GQIGRALASRAEAFGMSVRYWN  201 (340)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEC
T ss_pred             cccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEc
Confidence            578999999988 5699999999999999999888

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=95.05  E-value=0.86  Score=40.82  Aligned_cols=146  Identities=10%  Similarity=0.070  Sum_probs=85.8

Q ss_pred             CCcEEEEecCCC-chHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGD-EISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~-giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .|.+.++....+ +++..++..|.++|.+|+.+. ...                 .         +.+  ...+.+.+..
T Consensus        49 ~g~wlv~~~~~~~~~~~~l~~~L~~~G~~v~~v~~~~~-----------------~---------~~~--~~~~~l~~~~  100 (525)
T 3qp9_A           49 SGRWLVVVPEDRSAEAAPVLAALSGAGADPVQLDVSPL-----------------G---------DRQ--RLAATLGEAL  100 (525)
T ss_dssp             CSEEEEEEEGGGCTTTHHHHHHHHHTTCEEEEEEECTT-----------------C---------CHH--HHHHHHHHHH
T ss_pred             CCeEEEEECCCcchHHHHHHHHHHhcCCeEEEEeCCCC-----------------C---------CHH--HHHHHHHhhh
Confidence            455555555443 288889999999999887764 211                 0         333  4555555322


Q ss_pred             -HHhCCCCEEEEcCCCCCCCCCCC-CCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           82 -QILGNLDAFVHCYTYEGKMQDPL-QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        82 -~~~g~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                       ...+.++.++|..+......+.. ...        ...+.+.+.++|++...    +...+++.++..+-...   +.-
T Consensus       101 ~~~~~~~~~v~~l~~~~~~~~~~~~~~~--------~~g~~~~l~l~qal~~~----~~~~~l~~vT~ga~~~~---~~~  165 (525)
T 3qp9_A          101 AAAGGAVDGVLSLLAWDESAHPGHPAPF--------TRGTGATLTLVQALEDA----GVAAPLWCVTHGAVSVG---RAD  165 (525)
T ss_dssp             HHTTSCCSEEEECGGGCCCBCTTSCTTC--------BHHHHHHHHHHHHHHHT----TCCSCEEEEEESCCCCB---TTB
T ss_pred             hcccCCCCeEEEcccCCCCccccccccc--------cchHHHHHHHHHHHHhc----CCCCcEEEEECCCEeCC---CCC
Confidence             44567899999977632211111 111        02345667777776542    22467777776543222   111


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEec
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR  192 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~p  192 (266)
                      ..-...++++-+|.|.++.|+.....+...+.+
T Consensus       166 ~~~~p~~a~l~Gl~r~~~~E~p~~~~~~vDl~~  198 (525)
T 3qp9_A          166 HVTSPAQAMVWGMGRVAALEHPERWGGLIDLPS  198 (525)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHSTTTEEEEEEECS
T ss_pred             CCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCC
Confidence            223567899999999999998765455555543

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.01  E-value=0.084  Score=43.59  Aligned_cols=84  Identities=8%  Similarity=0.075  Sum_probs=53.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHH-------HhcccCCCCCeEEEEEecCCCchHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEK-------MMGSLKGGQPVEVVGLDMEEDREGAFDEAV   77 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~   77 (266)
                      +++.|.|. |.+|..++..|+++|++|++.+ ++++.+++.+.       +.+. .  . ..++..=+.+..  .++.++
T Consensus        16 ~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~-~--~-aDvvi~~vp~~~--~~~~v~   88 (296)
T 3qha_A           16 LKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADV-A--A-ADLIHITVLDDA--QVREVV   88 (296)
T ss_dssp             CCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHH-T--T-SSEEEECCSSHH--HHHHHH
T ss_pred             CeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHH-H--h-CCEEEEECCChH--HHHHHH
Confidence            46777775 6699999999999999999999 66666655432       1111 0  1 233333345444  677777


Q ss_pred             HHHHHHhCCCCEEEEcCCC
Q 024517           78 DKACQILGNLDAFVHCYTY   96 (266)
Q Consensus        78 ~~~~~~~g~id~li~~ag~   96 (266)
                      +.+.....+=.++|++...
T Consensus        89 ~~l~~~l~~g~ivv~~st~  107 (296)
T 3qha_A           89 GELAGHAKPGTVIAIHSTI  107 (296)
T ss_dssp             HHHHTTCCTTCEEEECSCC
T ss_pred             HHHHHhcCCCCEEEEeCCC
Confidence            7766554444667776543

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.01  E-value=0.032  Score=46.09  Aligned_cols=35  Identities=11%  Similarity=0.147  Sum_probs=31.6

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      ++.+++++|.|. |+||+++++.+...|++|++.++
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr  186 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGAR  186 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEEC
Confidence            578999999995 68999999999999999999884

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=94.99  E-value=0.06  Score=45.02  Aligned_cols=34  Identities=18%  Similarity=0.143  Sum_probs=30.8

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      ++.||++.|.|.+ .||+++|+.+...|++|+..+
T Consensus       136 ~l~g~tvGIiG~G-~IG~~vA~~l~~~G~~V~~~d  169 (315)
T 3pp8_A          136 TREEFSVGIMGAG-VLGAKVAESLQAWGFPLRCWS  169 (315)
T ss_dssp             CSTTCCEEEECCS-HHHHHHHHHHHTTTCCEEEEE
T ss_pred             CcCCCEEEEEeeC-HHHHHHHHHHHHCCCEEEEEc
Confidence            5789999999875 599999999999999999988

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=94.91  E-value=0.032  Score=45.27  Aligned_cols=45  Identities=18%  Similarity=0.285  Sum_probs=35.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKM   48 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~   48 (266)
                      ++++ +++|.|+ |++|+++++.|.+.|++|++++ +.++.+++.+++
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            4678 8999997 6699999999999999988888 445555555443

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=94.88  E-value=0.099  Score=45.70  Aligned_cols=62  Identities=13%  Similarity=0.152  Sum_probs=43.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cc-------------------cccHHHHHHHhcccCCCCCeEEEE
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NE-------------------RRLSSVAEKMMGSLKGGQPVEVVG   62 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~   62 (266)
                      ++.+|+|.|+ ||+|..+++.|+..|. ++.++| +.                   .+.+..++.+++..+. .++..+.
T Consensus        39 ~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~-v~v~~~~  116 (434)
T 1tt5_B           39 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPN-CNVVPHF  116 (434)
T ss_dssp             HTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTT-CCCEEEE
T ss_pred             cCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCC-CEEEEEe
Confidence            5678999997 5599999999999998 788886 21                   2345556666655442 5566666


Q ss_pred             EecCC
Q 024517           63 LDMEE   67 (266)
Q Consensus        63 ~D~~~   67 (266)
                      .++++
T Consensus       117 ~~i~~  121 (434)
T 1tt5_B          117 NKIQD  121 (434)
T ss_dssp             SCGGG
T ss_pred             cccch
Confidence            55554

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=94.86  E-value=0.072  Score=45.62  Aligned_cols=69  Identities=16%  Similarity=0.268  Sum_probs=48.1

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +.+|+++|.|++. +|+.+++.+.+.|++|++++ +.....   ..+       .. ..+..|..|.+  .+.+++++  
T Consensus        10 ~~~~~IlIlG~G~-lg~~la~aa~~lG~~viv~d~~~~~p~---~~~-------ad-~~~~~~~~d~~--~l~~~~~~--   73 (377)
T 3orq_A           10 KFGATIGIIGGGQ-LGKMMAQSAQKMGYKVVVLDPSEDCPC---RYV-------AH-EFIQAKYDDEK--ALNQLGQK--   73 (377)
T ss_dssp             CTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESCTTCTT---GGG-------SS-EEEECCTTCHH--HHHHHHHH--
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEECCCCChh---hhh-------CC-EEEECCCCCHH--HHHHHHHh--
Confidence            5789999999765 99999999999999999998 433211   111       11 35567888776  66666543  


Q ss_pred             HHhCCCCEEEE
Q 024517           82 QILGNLDAFVH   92 (266)
Q Consensus        82 ~~~g~id~li~   92 (266)
                           +|++..
T Consensus        74 -----~dvi~~   79 (377)
T 3orq_A           74 -----CDVITY   79 (377)
T ss_dssp             -----CSEEEE
T ss_pred             -----CCccee
Confidence                 677643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	266
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	1e-35
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	2e-35
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	3e-35
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	4e-35
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	5e-35
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	1e-34
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	5e-34
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	7e-34
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	2e-33
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	4e-33
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	2e-32
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	3e-32
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	4e-32
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	4e-32
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	8e-32
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	1e-30
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	1e-30
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	1e-30
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-30
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	3e-30
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	9e-30
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	1e-29
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	1e-29
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	7e-29
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	8e-29
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	3e-28
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	3e-28
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	4e-28
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	1e-27
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-27
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	2e-27
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-27
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	3e-27
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-27
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	4e-27
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	5e-26
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	5e-26
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	7e-26
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	4e-25
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	6e-25
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	1e-24
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	6e-24
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	1e-23
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	3e-23
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	5e-23
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	1e-22
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	2e-22
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	7e-22
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-20
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	1e-20
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	2e-20
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	1e-19
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	2e-18
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-18
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	1e-17
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	2e-17
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-16
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	3e-16
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	2e-15
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-15
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	8e-14
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	8e-14
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	5e-13
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	3e-10
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	1e-08
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	1e-05

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  126 bits (317), Expect = 1e-35
 Identities = 55/264 (20%), Positives = 103/264 (39%), Gaps = 18/264 (6%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K  ++T   + I +  A   A+ G ++ + G +  RL    ++++ +    Q V  V  D
Sbjct: 6   KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVAD 65

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHC---YTYEGKMQDPLQVGEDEFKKLVKINFVA 121
           +    +   DE +       G LD  V+       + + +       + +   + +N  +
Sbjct: 66  VTT--DAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 123

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
              L K     +  +K  G IV ++SI        P    Y    A+I Q  R  A+++ 
Sbjct: 124 VIALTKKAVPHLSSTK--GEIVNISSIASGLHA-TPDFPYYSIAKAAIDQYTRNTAIDLI 180

Query: 182 KHKIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI 234
           +H IRVN I+ GL        +      +      +  ++E  P       + D+A  + 
Sbjct: 181 QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQ-DIAEVIA 239

Query: 235 YLIS-DGSRYMTGTTIYVDGAQSI 257
           +L     S Y+ G  + VDG  S+
Sbjct: 240 FLADRKTSSYIIGHQLVVDGGSSL 263

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  124 bits (314), Expect = 2e-35
 Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 19/257 (7%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           K VL+T     I + IA   A+ G  + L         VAE        G     V L+ 
Sbjct: 6   KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEA------IGGAFFQVDLED 59

Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 125
           E +R    +EA       LG +D  V+           L V   E+++++++N  AP  L
Sbjct: 60  ERERVRFVEEAAYA----LGRVDVLVNNAAI-AAPGSALTVRLPEWRRVLEVNLTAPMHL 114

Query: 126 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 185
                R M+  K GG  +   + +          AAY A    +  L R+ A+++   +I
Sbjct: 115 SALAAREMR--KVGGGAIVNVASVQGLFA-EQENAAYNASKGGLVNLTRSLALDLAPLRI 171

Query: 186 RVNGIARGL----HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 241
           RVN +A G      + +   ++   ER  +   +   L R    + ++A  V++L S+ +
Sbjct: 172 RVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPE-EVAEAVLFLASEKA 230

Query: 242 RYMTGTTIYVDGAQSIT 258
            ++TG  + VDG  + +
Sbjct: 231 SFITGAILPVDGGMTAS 247

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  124 bits (313), Expect = 3e-35
 Identities = 59/253 (23%), Positives = 107/253 (42%), Gaps = 12/253 (4%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           K  ++T     I   IA    + G ++++ G   R S V EK   S+     ++    D 
Sbjct: 7   KVAIITGGTLGIGLAIATKFVEEGAKVMITG---RHSDVGEKAAKSVGTPDQIQFFQHDS 63

Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 125
            +  E  + +  D   +  G +   V+        +   +    E++KL+ +N    +F 
Sbjct: 64  SD--EDGWTKLFDATEKAFGPVSTLVNNAGIA-VNKSVEETTTAEWRKLLAVNLDGVFFG 120

Query: 126 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI--GKH 183
            +   +RMK    G SI+ ++SI G      P   AY A   ++  + ++AA++     +
Sbjct: 121 TRLGIQRMKNKGLGASIINMSSIEG--FVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178

Query: 184 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
            +RVN +  G           G E A+   R   P+    +  ND+A   +YL S+ S++
Sbjct: 179 DVRVNTVHPGYIKTPLVDDLPGAEEAMSQ-RTKTPMGHIGEP-NDIAYICVYLASNESKF 236

Query: 244 MTGTTIYVDGAQS 256
            TG+   VDG  +
Sbjct: 237 ATGSEFVVDGGYT 249

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (312), Expect = 4e-35
 Identities = 48/259 (18%), Positives = 111/259 (42%), Gaps = 24/259 (9%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K V++T  G  I   I       G R+V+   +E    ++ +++ G          +  D
Sbjct: 7   KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG-------AVFILCD 59

Query: 65  M--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
           +  E+D +    E + +  ++    D  V+   +    Q P +     F++L+++N +  
Sbjct: 60  VTQEDDVKTLVSETIRRFGRL----DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGT 115

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
           + L K     ++  K+ G+++ ++S++GA       A  Y A   ++  + +  A++   
Sbjct: 116 YTLTKLALPYLR--KSQGNVINISSLVGAIG--QAQAVPYVATKGAVTAMTKALALDESP 171

Query: 183 HKIRVNGIARGL----HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 238
           + +RVN I+ G       ++   +      +++    A PL R      ++ +  ++L S
Sbjct: 172 YGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPA-EVGAAAVFLAS 230

Query: 239 DGSRYMTGTTIYVDGAQSI 257
           + + + TG  + V G   +
Sbjct: 231 E-ANFCTGIELLVTGGAEL 248

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  123 bits (311), Expect = 5e-35
 Identities = 64/249 (25%), Positives = 116/249 (46%), Gaps = 18/249 (7%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
            R L+T  G  I ++    L   G ++V V      L S+A++  G       +E V +D
Sbjct: 6   LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG-------IEPVCVD 58

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           + +       +A +KA   +G +D  V+       MQ  L+V ++ F +   +N  + + 
Sbjct: 59  LGDW------DATEKALGGIGPVDLLVNN-AALVIMQPFLEVTKEAFDRSFSVNLRSVFQ 111

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           + + V R M      GSIV ++S+       +P    Y +   ++  L +  AME+G HK
Sbjct: 112 VSQMVARDMINRGVPGSIVNVSSM--VAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHK 169

Query: 185 IRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
           IRVN +   + L D            + ++E  PL ++ +V+ D+ +++++L+SD S   
Sbjct: 170 IRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVE-DVVNSILFLLSDRSAST 228

Query: 245 TGTTIYVDG 253
           +G  I VD 
Sbjct: 229 SGGGILVDA 237

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (308), Expect = 1e-34
 Identities = 59/249 (23%), Positives = 113/249 (45%), Gaps = 18/249 (7%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           +RVL+T  G  I +     L   G R+V V   +  L S+  +  G       +E V +D
Sbjct: 8   RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-------IEPVCVD 60

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           + +       EA ++A   +G +D  V+       +Q  L+V ++ F +  ++N  A   
Sbjct: 61  LGDW------EATERALGSVGPVDLLVNNAAV-ALLQPFLEVTKEAFDRSFEVNLRAVIQ 113

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           + + V R +      G+IV ++S     +      + Y +   ++  L +  A+E+G HK
Sbjct: 114 VSQIVARGLIARGVPGAIVNVSSQCS--QRAVTNHSVYCSTKGALDMLTKVMALELGPHK 171

Query: 185 IRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
           IRVN +   + +              K +    PL ++ +V+  + + +++L+SD S   
Sbjct: 172 IRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVE-HVVNAILFLLSDRSGMT 230

Query: 245 TGTTIYVDG 253
           TG+T+ V+G
Sbjct: 231 TGSTLPVEG 239

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  121 bits (305), Expect = 5e-34
 Identities = 67/262 (25%), Positives = 113/262 (43%), Gaps = 16/262 (6%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K V++T     +    A      G R+VL    +   ++ A ++      G       LD
Sbjct: 6   KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL------GDAARYQHLD 59

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           +    E  +   V  A +  G++D  V+       M        + F+K+V+IN    + 
Sbjct: 60  V--TIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLE-TESVERFRKVVEINLTGVFI 116

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
            +K V   MK++  GGSIV ++S  G         ++YGA    +  L + AA+E+G  +
Sbjct: 117 GMKTVIPAMKDAG-GGSIVNISSAAG--LMGLALTSSYGASKWGVRGLSKLAAVELGTDR 173

Query: 185 IRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
           IRVN +  G+        A    R  +      P+ R  +   ++A  V+ L+SD S Y+
Sbjct: 174 IRVNSVHPGMTYTPM--TAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYV 231

Query: 245 TGTTIYVDGAQSITRPRMRSYM 266
           TG  + VDG  + T P ++  M
Sbjct: 232 TGAELAVDGGWT-TGPTVKYVM 252

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  121 bits (305), Expect = 7e-34
 Identities = 56/266 (21%), Positives = 105/266 (39%), Gaps = 18/266 (6%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K V++T   + I +  A   A+ G  + + G +  RL    + ++ S    + V  V  D
Sbjct: 6   KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVAD 65

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHC---YTYEGKMQDPLQVGEDEFKKLVKINFVA 121
           +    E   D+ ++   +  G +D  V+       +         G D + K +K+N  A
Sbjct: 66  VTT--EDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQA 123

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
              + K V   +  SK     V   S I A     P    Y    A++ Q  R+ A+++ 
Sbjct: 124 VIEMTKKVKPHLVASKGEIVNV---SSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLA 180

Query: 182 KHKIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI 234
           K  IRVN ++ G+        +      +      +   +E  P+      +  +A+ ++
Sbjct: 181 KFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPE-HIANIIL 239

Query: 235 YLIS-DGSRYMTGTTIYVDGAQSITR 259
           +L   + S Y+ G +I  DG  S+  
Sbjct: 240 FLADRNLSFYILGQSIVADGGTSLVM 265

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  120 bits (303), Expect = 2e-33
 Identities = 49/262 (18%), Positives = 107/262 (40%), Gaps = 16/262 (6%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K V++T   + I ++ A   AK G ++ + G NE RL    ++++ +    + +  V  D
Sbjct: 5   KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVAD 64

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHC-YTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
           + E      D+ ++      G +D  V+                 + ++K  K+NF A  
Sbjct: 65  VTE--ASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI 122

Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 183
            + +     + ++      +   S I A    + G   Y    A++ Q  R  A+++ +H
Sbjct: 123 EMTQKTKEHLIKT---KGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQH 179

Query: 184 KIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL 236
            +RVN ++ G         +      +      +   +E  P+      + ++A+ +++L
Sbjct: 180 GVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPE-EIANIIVFL 238

Query: 237 IS-DGSRYMTGTTIYVDGAQSI 257
              + S Y+ G +I  DG  ++
Sbjct: 239 ADRNLSSYIIGQSIVADGGSTL 260

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  119 bits (299), Expect = 4e-33
 Identities = 49/258 (18%), Positives = 98/258 (37%), Gaps = 14/258 (5%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K +++T     I       +A  G  + ++  +      V EK+      G   +    D
Sbjct: 10  KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF--GVKTKAYQCD 67

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           +         + + +    LG +   +        ++   ++  ++F  +  +N    + 
Sbjct: 68  VSN--TDIVTKTIQQIDADLGPISGLIANA-GVSVVKPATELTHEDFAFVYDVNVFGVFN 124

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIG-----AERGLYPGAAAYGACAASIHQLVRTAAME 179
             +AV +   + +  GSIV  +S+       +          Y +  A+   LV+  A E
Sbjct: 125 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAE 184

Query: 180 IGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD 239
                IRVN ++ G    D+   A   ++         PL+R+   + ++    I L+SD
Sbjct: 185 WASAGIRVNALSPGYVNTDQ--TAHMDKKIRDHQASNIPLNRFAQPE-EMTGQAILLLSD 241

Query: 240 GSRYMTGTTIYVDGAQSI 257
            + YMTG   ++DG Q I
Sbjct: 242 HATYMTGGEYFIDGGQLI 259

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  117 bits (293), Expect = 2e-32
 Identities = 56/252 (22%), Positives = 107/252 (42%), Gaps = 13/252 (5%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K  L+T  G  I + IA  LAK    ++ +   ++   SV +++      G        D
Sbjct: 11  KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF---GYESSGYAGD 67

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           + +  +    E ++K      N+D  V+            ++  DE++ +++ N  + ++
Sbjct: 68  VSK--KEEISEVINKILTEHKNVDILVNNAGITRDNLFL-RMKNDEWEDVLRTNLNSLFY 124

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           + + + +RM  ++  G I+ ++SI+G       G A Y +  A +    ++ A E+    
Sbjct: 125 ITQPISKRMINNR-YGRIINISSIVG--LTGNVGQANYSSSKAGVIGFTKSLAKELASRN 181

Query: 185 IRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
           I VN IA G    D        E+  K +    P  R    + ++A+   +L SD S Y+
Sbjct: 182 ITVNAIAPGFISSDMTDK--ISEQIKKNIISNIPAGRMGTPE-EVANLACFLSSDKSGYI 238

Query: 245 TGTTIYVDGAQS 256
            G    +DG  S
Sbjct: 239 NGRVFVIDGGLS 250

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (296), Expect = 3e-32
 Identities = 48/255 (18%), Positives = 102/255 (40%), Gaps = 9/255 (3%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           +  ++T     I K I   L + G  +V+      RL S A+++  +L   +   V+ + 
Sbjct: 13  QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQ 72

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
                E   +  V       G ++  V+       +     +    +  +++ N    ++
Sbjct: 73  CNIRNEEEVNNLVKSTLDTFGKINFLVNNG-GGQFLSPAEHISSKGWHAVLETNLTGTFY 131

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           + KAV     +   G  +  +          +P A   GA  A ++ L ++ A+E     
Sbjct: 132 MCKAVYSSWMKEHGGSIVNIIVPTKAG----FPLAVHSGAARAGVYNLTKSLALEWACSG 187

Query: 185 IRVNGIARGLHLQDEYPIAVGQ--ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 242
           IR+N +A G+          G   +   +   +  P  R    + +++S V +L+S  + 
Sbjct: 188 IRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPE-EVSSVVCFLLSPAAS 246

Query: 243 YMTGTTIYVDGAQSI 257
           ++TG ++ VDG +S+
Sbjct: 247 FITGQSVDVDGGRSL 261

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  116 bits (292), Expect = 4e-32
 Identities = 56/258 (21%), Positives = 97/258 (37%), Gaps = 16/258 (6%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
           K+ L+   ++   +   IA  L + G  + L     RL   AEK+  +L G         
Sbjct: 9   KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVT 68

Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHC---YTYEGKMQDPLQVGEDEFKKLVKINFV 120
             EE      D       +  G LD  VH       E      +     ++   ++++  
Sbjct: 69  QDEE-----LDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAY 123

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
           +   + +     ++E   GG IV LT        + P         A++   VR  A E+
Sbjct: 124 SLVAVARRAEPLLRE---GGGIVTLTYYAS--EKVVPKYNVMAIAKAALEASVRYLAYEL 178

Query: 181 GKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG 240
           G   +RVN I+ G           G  +    V + APL R +  + ++ +  ++L+S  
Sbjct: 179 GPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQE-EVGNLGLFLLSPL 237

Query: 241 SRYMTGTTIYVDGAQSIT 258
           +  +TG  +YVD    I 
Sbjct: 238 ASGITGEVVYVDAGYHIM 255

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  116 bits (291), Expect = 4e-32
 Identities = 57/250 (22%), Positives = 94/250 (37%), Gaps = 15/250 (6%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           K  ++T   + I + IA   A  G  + +       +  AE  + +L  G+ V  V  D+
Sbjct: 6   KLAVITGGANGIGRAIAERFAVEGADIAIAD--LVPAPEAEAAIRNL--GRRVLTVKCDV 61

Query: 66  --EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
               D E    + +       G  D  V+       +    ++  +++KK  +IN  + +
Sbjct: 62  SQPGDVEAFGKQVIST----FGRCDILVNNAGI-YPLIPFDELTFEQWKKTFEINVDSGF 116

Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 183
            + KA    MK +   G I+ LTS              Y +  A+     R  A ++GK 
Sbjct: 117 LMAKAFVPGMKRNG-WGRIINLTSTTY--WLKIEAYTHYISTKAANIGFTRALASDLGKD 173

Query: 184 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
            I VN IA  L        +        L      + R      DL     +L SD + +
Sbjct: 174 GITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPL-DLTGAAAFLASDDASF 232

Query: 244 MTGTTIYVDG 253
           +TG T+ VDG
Sbjct: 233 ITGQTLAVDG 242

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (290), Expect = 8e-32
 Identities = 40/254 (15%), Positives = 84/254 (33%), Gaps = 12/254 (4%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           +  L+T     I   +A  L ++G ++V        +  +A +   +   G P  ++   
Sbjct: 11  RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSA---GYPGTLIPYR 67

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
            +   E                +D  ++      +    L      +K +  +N +A   
Sbjct: 68  CDLSNEEDILSMFSAIRSQHSGVDICINN-AGLARPDTLLSGSTSGWKDMFNVNVLALSI 126

Query: 125 LLKAVGRRMKESKA-GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI--G 181
             +   + MKE     G I+ + S+ G           Y A   ++  L      E+   
Sbjct: 127 CTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREA 186

Query: 182 KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 241
           +  IR   I+ G+            ++  +         + L  + D+A  VIY++S  +
Sbjct: 187 QTHIRATCISPGVVETQF--AFKLHDKDPEKAAATYEQMKCLKPE-DVAEAVIYVLSTPA 243

Query: 242 RYMTGT-TIYVDGA 254
               G   +   G+
Sbjct: 244 HIQIGDIQMRPTGS 257

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  113 bits (282), Expect = 1e-30
 Identities = 55/255 (21%), Positives = 95/255 (37%), Gaps = 9/255 (3%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
           KR+L+T  +    I+  IA  + + G  L       +L    E+      G   V    +
Sbjct: 6   KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ-LGSDIVLQCDV 64

Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
             +   +  F E      +  G + +       +        V  + FK    I+  +  
Sbjct: 65  AEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFV 124

Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 183
            + KA    +      GS +   S +GAER   P     G   AS+   VR  A  +G  
Sbjct: 125 AMAKACRSMLNP----GSALLTLSYLGAERA-IPNYNVMGLAKASLEANVRYMANAMGPE 179

Query: 184 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
            +RVN I+ G              + +       P+ R + ++ D+ ++  +L SD S  
Sbjct: 180 GVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIE-DVGNSAAFLCSDLSAG 238

Query: 244 MTGTTIYVDGAQSIT 258
           ++G  ++VDG  SI 
Sbjct: 239 ISGEVVHVDGGFSIA 253

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (281), Expect = 1e-30
 Identities = 52/257 (20%), Positives = 108/257 (42%), Gaps = 23/257 (8%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K ++LT+    I +  A   A+ G +++    NE +L  + +           ++   LD
Sbjct: 7   KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPG--------IQTRVLD 58

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           + + ++        +   +L N+  FVH           L   E ++   + +N  + + 
Sbjct: 59  VTKKKQIDQFANEVERLDVLFNVAGFVH-------HGTVLDCEEKDWDFSMNLNVRSMYL 111

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           ++KA   +M   +  G+I+ ++S+  + +G+      Y    A++  L ++ A +  +  
Sbjct: 112 MIKAFLPKMLA-QKSGNIINMSSVASSVKGVVNRCV-YSTTKAAVIGLTKSVAADFIQQG 169

Query: 185 IRVNGIARGLH----LQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG 240
           IR N +  G      LQ+        E A     +     R+   + ++A   +YL SD 
Sbjct: 170 IRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAE-EIAMLCVYLASDE 228

Query: 241 SRYMTGTTIYVDGAQSI 257
           S Y+TG  + +DG  S+
Sbjct: 229 SAYVTGNPVIIDGGWSL 245

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  112 bits (282), Expect = 1e-30
 Identities = 56/259 (21%), Positives = 100/259 (38%), Gaps = 12/259 (4%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K  ++T     I +  A    + G ++V+    +     V       +     +  V  D
Sbjct: 7   KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNN----IGSPDVISFVHCD 62

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHC-YTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
           + +  +      VD      G LD                L+ G ++FK+++ IN    +
Sbjct: 63  VTK--DEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAF 120

Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 183
            + K   R M  +K G   +  T+ I +       +  Y A   ++  L  +   E+G++
Sbjct: 121 LVAKHAARVMIPAKKGS--IVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEY 178

Query: 184 KIRVNGIARGLHLQDEYPIAVG--QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 241
            IRVN ++  +          G    R  +L  +AA L   L    D+A  V YL  D S
Sbjct: 179 GIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDES 238

Query: 242 RYMTGTTIYVDGAQSITRP 260
           +Y++G  + +DG  + T P
Sbjct: 239 KYVSGLNLVIDGGYTRTNP 257

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  111 bits (279), Expect = 3e-30
 Identities = 60/254 (23%), Positives = 100/254 (39%), Gaps = 17/254 (6%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
              L+T     I   I   LA  G  +     N++ L+    +       G  VE    D
Sbjct: 9   CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK---GFKVEASVCD 65

Query: 65  M--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
           +    +R+   +   +      G L+  V+        ++      +++  ++ INF A 
Sbjct: 66  LSSRSERQELMNTVANHFH---GKLNILVNNAGI-VIYKEAKDYTVEDYSLIMSINFEAA 121

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
           + L       +K S+ G  +    S +       P  A YGA   ++ QL R  A E  K
Sbjct: 122 YHLSVLAHPFLKASERGNVVFI--SSVSGALA-VPYEAVYGATKGAMDQLTRCLAFEWAK 178

Query: 183 HKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD 239
             IRVNG+  G+    L +       Q+  +  + +   L R  + K +LA+ V +L   
Sbjct: 179 DNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPK-ELAAMVAFLCFP 237

Query: 240 GSRYMTGTTIYVDG 253
            + Y+TG  IYVDG
Sbjct: 238 AASYVTGQIIYVDG 251

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  111 bits (279), Expect = 3e-30
 Identities = 56/253 (22%), Positives = 101/253 (39%), Gaps = 18/253 (7%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K  L+T     +   +   L   G ++     NE     +A ++      G+    V  D
Sbjct: 7   KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL------GERSMFVRHD 60

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           +    E  +   +    + LG L+  V+         D      ++F +L+KIN  + + 
Sbjct: 61  VSS--EADWTLVMAAVQRRLGTLNVLVNNAGI-LLPGDMETGRLEDFSRLLKINTESVFI 117

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK-- 182
             +     MKE+  GGSI+ + S+           A Y A  A++  L R AA+   K  
Sbjct: 118 GCQQGIAAMKET--GGSIINMASVSS--WLPIEQYAGYSASKAAVSALTRAAALSCRKQG 173

Query: 183 HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRW--LDVKNDLASTVIYLISDG 240
           + IRVN I            ++ +  + ++V     L+R     +   +A  V++L SD 
Sbjct: 174 YAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDE 233

Query: 241 SRYMTGTTIYVDG 253
           S  M+G+ ++ D 
Sbjct: 234 SSVMSGSELHADN 246

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  110 bits (275), Expect = 9e-30
 Identities = 70/258 (27%), Positives = 113/258 (43%), Gaps = 19/258 (7%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVE 59
           M  + K VL+T     I +      AK G RLV     E  L   AE +     G  PV 
Sbjct: 1   MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----GAHPV- 54

Query: 60  VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINF 119
           V+ +      E  F EA+      LG LD  VH      +     ++  ++++ ++++N 
Sbjct: 55  VMDVADPASVERGFAEALAH----LGRLDGVVHY-AGITRDNFHWKMPLEDWELVLRVNL 109

Query: 120 VAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME 179
              + + KA    M+E   G  ++  + +         G A Y A  A +  L RT A+E
Sbjct: 110 TGSFLVAKAASEAMREKNPGSIVLTASRVYLG----NLGQANYAASMAGVVGLTRTLALE 165

Query: 180 IGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD 239
           +G+  IRVN +A G         A   E+  +    A PL R      ++A   ++L+SD
Sbjct: 166 LGRWGIRVNTLAPGFIETRM--TAKVPEKVREKAIAATPLGRAGKPL-EVAYAALFLLSD 222

Query: 240 GSRYMTGTTIYVDGAQSI 257
            S ++TG  ++VDG ++I
Sbjct: 223 ESSFITGQVLFVDGGRTI 240

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (275), Expect = 1e-29
 Identities = 48/272 (17%), Positives = 94/272 (34%), Gaps = 33/272 (12%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K  L+T     I +  A  L  +G ++ LV  N          +    +  +    +  D
Sbjct: 4   KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQK-TLFIQCD 62

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           + +  +    +   K     G LD  V+      +           ++K ++IN V+   
Sbjct: 63  VAD--QQQLRDTFRKVVDHFGRLDILVNNAGVNNEK---------NWEKTLQINLVSVIS 111

Query: 125 LLKAVGRRMKESKAG--GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAM--EI 180
                   M +   G  G I+ ++S+ G           Y A    I    R+AA+   +
Sbjct: 112 GTYLGLDYMSKQNGGEGGIIINMSSLAG--LMPVAQQPVYCASKHGIVGFTRSAALAANL 169

Query: 181 GKHKIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTV 233
               +R+N I  G         ++ E  +    E     +++    +  LD    +A+ +
Sbjct: 170 MNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYK-DHIKDMIKYYGILDPP-LIANGL 227

Query: 234 IYLISDGSRYMTGTTIYVDGAQSITRPRMRSY 265
           I LI D    + G  + +  ++ I     + Y
Sbjct: 228 ITLIED--DALNGAIMKITTSKGI---HFQDY 254

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  110 bits (275), Expect = 1e-29
 Identities = 57/261 (21%), Positives = 96/261 (36%), Gaps = 15/261 (5%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K VL+T     I   I    A  G  +     NE  L+    K            V    
Sbjct: 9   KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKW-QKKGFQVTGSVCDAS 67

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           +  +RE              G LD  ++      + +  L    ++F   +  N  + + 
Sbjct: 68  LRPEREKLMQTVSSMFG---GKLDILINNLGA-IRSKPTLDYTAEDFSFHISTNLESAYH 123

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           L +     +K   +G   +   S I        G+  Y A   +++QL R  A E     
Sbjct: 124 LSQLAHPLLK--ASGCGNIIFMSSIAGVVSASVGSI-YSATKGALNQLARNLACEWASDG 180

Query: 185 IRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
           IR N +A  +        AV  +   K+V    PL R+ + + +++S V +L    + Y+
Sbjct: 181 IRANAVAPAVIATPLAE-AVYDDEFKKVVISRKPLGRFGEPE-EVSSLVAFLCMPAASYI 238

Query: 245 TGTTIYVDGAQSIT----RPR 261
           TG TI VDG  ++     +P+
Sbjct: 239 TGQTICVDGGLTVNGFSYQPQ 259

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  108 bits (271), Expect = 7e-29
 Identities = 48/269 (17%), Positives = 98/269 (36%), Gaps = 24/269 (8%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVE 59
           M+ + + VL+T     + + +       G ++ ++  +  RL+ +          G  V 
Sbjct: 1   MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH------GDNVL 54

Query: 60  VVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKI 117
            +  D+   ED++ A    V +  +I   +            +  P +  +  F ++  I
Sbjct: 55  GIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHI 114

Query: 118 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAA 177
           N       +KA    +  S   G+++F  S  G       G   Y A   +I  LVR  A
Sbjct: 115 NVKGYIHAVKACLPALVAS--RGNVIFTISNAGFYPN--GGGPLYTAAKHAIVGLVRELA 170

Query: 178 MEIGKHKIRVNGIARGL--------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDL 229
            E+  + +RVNG+  G                 A+       +++   P+ R  +V+ + 
Sbjct: 171 FELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVE-EY 228

Query: 230 ASTVIYLIS-DGSRYMTGTTIYVDGAQSI 257
               ++  +   +   TG  +  DG   +
Sbjct: 229 TGAYVFFATRGDAAPATGALLNYDGGLGV 257

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  107 bits (268), Expect = 8e-29
 Identities = 56/253 (22%), Positives = 113/253 (44%), Gaps = 16/253 (6%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K  L+T     I + IA  LA RG +++    +E    ++++ +      G   + + L+
Sbjct: 5   KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL------GANGKGLMLN 58

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           +      + +  ++K     G +D  +       +    +++ ++E+  +++ N  + + 
Sbjct: 59  V--TDPASIESVLEKIRAEFGEVD-ILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFR 115

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           L KAV R M + +  G I+ + S++G       G A Y A  A +    ++ A E+    
Sbjct: 116 LSKAVMRAMMKKR-HGRIITIGSVVG--TMGNGGQANYAAAKAGLIGFSKSLAREVASRG 172

Query: 185 IRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
           I VN +A G    D        +RA   +    P  R    + ++A+ V +L SD + Y+
Sbjct: 173 ITVNVVAPGFIETDMTRALSDDQRAG--ILAQVPAGRLGGAQ-EIANAVAFLASDEAAYI 229

Query: 245 TGTTIYVDGAQSI 257
           TG T++V+G   +
Sbjct: 230 TGETLHVNGGMYM 242

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  107 bits (268), Expect = 3e-28
 Identities = 44/254 (17%), Positives = 100/254 (39%), Gaps = 10/254 (3%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K   +T  G  + K +   L+  G + V+       L + AE++    + G  V  +  D
Sbjct: 26  KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISS--QTGNKVHAIQCD 83

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           + +         V +  ++ G+ +  ++       +    ++  + +K +  I      F
Sbjct: 84  VRD--PDMVQNTVSELIKVAGHPNIVINN-AAGNFISPTERLSPNAWKTITDIVLNGTAF 140

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           +   +G+++ +++ G + + +T+I               +  A +  + ++ A E GK+ 
Sbjct: 141 VTLEIGKQLIKAQKGAAFLSITTI--YAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYG 198

Query: 185 IRVNGIARGLHLQDEYPIAVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
           +R N I  G          +       K +    P  R   V+ +LA+   +L SD + +
Sbjct: 199 MRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVE-ELANLAAFLCSDYASW 257

Query: 244 MTGTTIYVDGAQSI 257
           + G  I  DG + +
Sbjct: 258 INGAVIKFDGGEEV 271

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  106 bits (266), Expect = 3e-28
 Identities = 56/264 (21%), Positives = 101/264 (38%), Gaps = 22/264 (8%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKG-GQPVEVVGLD 64
           K  L+T  G  I + +A  L +RGC++++       +  AE+++ ++K  G     V  +
Sbjct: 19  KVALVTGAGRGIGREMAMELGRRGCKVIVNY--ANSTESAEEVVAAIKKNGSDAACVKAN 76

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           +            ++A +I G LD  V   +          V  +EF ++  IN    +F
Sbjct: 77  V--GVVEDIVRMFEEAVKIFGKLD-IVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFF 133

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           + +   + ++          L   I  +    P  A Y     +I    R  A+++   K
Sbjct: 134 VAREAYKHLEIGGRL----ILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKK 189

Query: 185 IRVNGIARGLHLQD-----------EYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTV 233
           I VN +A G    D                  +E       + +PL R      D+A  V
Sbjct: 190 ITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPI-DIARVV 248

Query: 234 IYLISDGSRYMTGTTIYVDGAQSI 257
            +L S+   ++TG  I +DG   +
Sbjct: 249 CFLASNDGGWVTGKVIGIDGGACM 272

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  106 bits (265), Expect = 4e-28
 Identities = 63/260 (24%), Positives = 101/260 (38%), Gaps = 22/260 (8%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKG-GQPVEVVGLD 64
           K  L T  G  I + IA  L +RG  +V+  N    S  AE+++  LK  G     +  D
Sbjct: 7   KVALTTGAGRGIGRGIAIELGRRGASVVV--NYGSSSKAAEEVVAELKKLGAQGVAIQAD 64

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           + +          DKA    G LD  +          D L+V ++ F K+  +N    +F
Sbjct: 65  ISK--PSEVVALFDKAVSHFGGLDFVMSNSGM-EVWCDELEVTQELFDKVFNLNTRGQFF 121

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           + +   +  +    GG I+  +SI     G+ P  A Y    A++    R  A++ G   
Sbjct: 122 VAQQGLKHCRR---GGRIILTSSIAAVMTGI-PNHALYAGSKAAVEGFCRAFAVDCGAKG 177

Query: 185 IRVNGIARGL-----------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTV 233
           + VN IA G            H        + QE+  + +    PL R      D+   V
Sbjct: 178 VTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPA-DIGRAV 236

Query: 234 IYLISDGSRYMTGTTIYVDG 253
             L  + S ++ G  I + G
Sbjct: 237 SALCQEESEWINGQVIKLTG 256

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  105 bits (264), Expect = 1e-27
 Identities = 49/259 (18%), Positives = 93/259 (35%), Gaps = 28/259 (10%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG------NERRLSSVAEKMMGSLKG 54
           +    + VL+T  G  + +  A   A+RG  +V+           + SS A+K++  ++ 
Sbjct: 3   LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR 62

Query: 55  GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKL 114
                V   D  E  E     A+D      G +D  V+      + +   ++ ++++  +
Sbjct: 63  RGGKAVANYDSVEAGEKLVKTALDT----FGRIDVVVNNAGI-LRDRSFSRISDEDWDII 117

Query: 115 VKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVR 174
            +++    + + +A    MK+    G I+   S  G       G A Y A    +  L  
Sbjct: 118 QRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASG--IYGNFGQANYSAAKLGLLGLAN 174

Query: 175 TAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI 234
           T  +E  K+ I  N IA           +   E  +        L   L  +  +A  V+
Sbjct: 175 TLVIEGRKNNIHCNTIAPN-------AGSRMTETVM-----PEDLVEALKPE-YVAPLVL 221

Query: 235 YLISDGSRYMTGTTIYVDG 253
           +L  +      G    V  
Sbjct: 222 WLCHESC-EENGGLFEVGA 239

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  104 bits (260), Expect = 2e-27
 Identities = 58/257 (22%), Positives = 100/257 (38%), Gaps = 18/257 (7%)

Query: 17  ISKNIAFHLAKRGCRLVLVG--NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFD 74
           I  +IA  L ++G R+V+    +E     +  ++  +  G   +    L +        +
Sbjct: 13  IGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCE 72

Query: 75  EAVDKACQILGNLDAFVHCY----------TYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           + +D + +  G  D  V+              +       +  + +  +L   N VAP F
Sbjct: 73  DIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLF 132

Query: 125 LLKAVGRRMKESKAGGSIVFLTSII--GAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
           L++A  RR  E  A  S       +         PG   Y     ++  L R AA+E+  
Sbjct: 133 LIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAP 192

Query: 183 HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 242
             IRVN +A GL L          +   +  R   PL +       +A  + +L+S  + 
Sbjct: 193 RHIRVNAVAPGLSLLP----PAMPQETQEEYRRKVPLGQSEASAAQIADAIAFLVSKDAG 248

Query: 243 YMTGTTIYVDGAQSITR 259
           Y+TGTT+ VDG   + R
Sbjct: 249 YITGTTLKVDGGLILAR 265

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  104 bits (259), Expect = 2e-27
 Identities = 66/263 (25%), Positives = 108/263 (41%), Gaps = 24/263 (9%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K  L+T  G  I    A  LA+ G  + L+  N   L      +    + G        D
Sbjct: 6   KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASV---REKGVEARSYVCD 62

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           +    E A    VD   +  G +D   +   Y+G          D+F +++ IN    + 
Sbjct: 63  VTS--EEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFH 120

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           +LKAV R+M     G   +  T+ +   +G  P  AAYG    +I  L  TAA+++  + 
Sbjct: 121 VLKAVSRQMITQNYG--RIVNTASMAGVKG-PPNMAAYGTSKGAIIALTETAALDLAPYN 177

Query: 185 IRVNGIARGL-------HLQDEYPIAVGQ-------ERAVKLVREAAPLHRWLDVKNDLA 230
           IRVN I+ G          Q E    VG        +   + +  + P+ R+ D+  ++ 
Sbjct: 178 IRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDIN-EIP 236

Query: 231 STVIYLISDGSRYMTGTTIYVDG 253
             V +L+ D S +MTG  + + G
Sbjct: 237 GVVAFLLGDDSSFMTGVNLPIAG 259

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  104 bits (259), Expect = 3e-27
 Identities = 50/258 (19%), Positives = 93/258 (36%), Gaps = 14/258 (5%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
              L+T     I   I   LA  G R+     NE+ L    E      + G  VE    D
Sbjct: 7   TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWR---EKGLNVEGSVCD 63

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           +        D+ +     +       +         ++     E ++  ++  NF A + 
Sbjct: 64  LLS--RTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYH 121

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           L +     +K S+     V   S I     L   +    +  A I+Q+ ++ A E  K  
Sbjct: 122 LSQIAYPLLKASQ--NGNVIFLSSIAGFSALPSVSLYSASKGA-INQMTKSLACEWAKDN 178

Query: 185 IRVNGIARGLH----LQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG 240
           IRVN +A G+     ++        Q+  +       P+ R    + ++++ + +L    
Sbjct: 179 IRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQ-EVSALIAFLCFPA 237

Query: 241 SRYMTGTTIYVDGAQSIT 258
           + Y+TG  I+ DG  +  
Sbjct: 238 ASYITGQIIWADGGFTAN 255

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  103 bits (258), Expect = 3e-27
 Identities = 59/254 (23%), Positives = 106/254 (41%), Gaps = 13/254 (5%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           +  L+T     +   IA  LA+ GC +V+   N    S  A+K+    K G        D
Sbjct: 6   RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTE--KYGVETMAFRCD 63

Query: 65  M--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
           +   E+ +   +   +K     G LD  V+      +     +   DEF++++++N    
Sbjct: 64  VSNYEEVKKLLEAVKEK----FGKLDTVVNAAGI-NRRHPAEEFPLDEFRQVIEVNLFGT 118

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
           +++ +     ++ES     I      +  E    P  +AY A    +  L +  A E G+
Sbjct: 119 YYVCREAFSLLRESDNPSIINI--GSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGR 176

Query: 183 HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 242
           + IRVN IA G +              +  + +  PL R    + DL    ++L S+ ++
Sbjct: 177 YGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPE-DLKGVAVFLASEEAK 235

Query: 243 YMTGTTIYVDGAQS 256
           Y+TG  I+VDG  +
Sbjct: 236 YVTGQIIFVDGGWT 249

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  103 bits (257), Expect = 3e-27
 Identities = 56/251 (22%), Positives = 107/251 (42%), Gaps = 11/251 (4%)

Query: 8   VLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEE 67
           V++T     I K IA  L K GC++++  N  R +  AE++   ++     + +    + 
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLV--NYARSAKAAEEVSKQIEA-YGGQAITFGGDV 60

Query: 68  DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLK 127
            +E   +  +  A    G +D  V       +    +++ + ++ +++ +N    +   +
Sbjct: 61  SKEADVEAMMKTAIDAWGTID-VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQ 119

Query: 128 AVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRV 187
           A  + M + +  G I+ + S++G       G A Y A  A +    +TAA E     I V
Sbjct: 120 AATKIMMKKR-KGRIINIASVVG--LIGNIGQANYAAAKAGVIGFSKTAAREGASRNINV 176

Query: 188 NGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL-ISDGSRYMTG 246
           N +  G    D    A   E   K +    PL R    + ++A  V +L +S  + Y+TG
Sbjct: 177 NVVCPGFIASDM--TAKLGEDMEKKILGTIPLGRTGQPE-NVAGLVEFLALSPAASYITG 233

Query: 247 TTIYVDGAQSI 257
               +DG  +I
Sbjct: 234 QAFTIDGGIAI 244

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  103 bits (257), Expect = 4e-27
 Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 16/259 (6%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG-L 63
           + VL+T  G  + +  A  LA  G +L LV  +   L +    ++ +    + +  V  +
Sbjct: 5   RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADV 64

Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
             E   E       ++     G +D F +    EGK          EF K+V IN    +
Sbjct: 65  SDEAQVEAYVTATTER----FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 120

Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 183
             L+ V + M+E  +G  +V  T+ +G  RG     + Y A    +  L R +A+E G++
Sbjct: 121 LGLEKVLKIMREQGSG--MVVNTASVGGIRG-IGNQSGYAAAKHGVVGLTRNSAVEYGRY 177

Query: 184 KIRVNGIARGLHLQD------EYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI 237
            IR+N IA G           +        +A +   +  P  R+ +   ++A+ V +L+
Sbjct: 178 GIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAP-EIAAVVAFLL 236

Query: 238 SDGSRYMTGTTIYVDGAQS 256
           SD + Y+  T + +DG QS
Sbjct: 237 SDDASYVNATVVPIDGGQS 255

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  100 bits (250), Expect = 5e-26
 Identities = 38/259 (14%), Positives = 77/259 (29%), Gaps = 27/259 (10%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVE 59
           M+   K V+  +    I  + +  L KR  +  ++       +++AE    + K    + 
Sbjct: 1   MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVN--IT 58

Query: 60  VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINF 119
               D+      +  + + K    L  +D  ++     G + D       + ++ + INF
Sbjct: 59  FHTYDVTVPVAES-KKLLKKIFDQLKTVDILINGA---GILDD------HQIERTIAINF 108

Query: 120 VAPWFLLKAVGRRM--KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAA 177
                   A+      ++   GG I  + S+ G           Y A  A++     + A
Sbjct: 109 TGLVNTTTAILDFWDKRKGGPGGIIANICSVTG--FNAIHQVPVYSASKAAVVSFTNSLA 166

Query: 178 MEIGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI 234
                  +    I  G+    L   +   +  E  V        L              +
Sbjct: 167 KLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVA----ELLLSHPTQTSEQCGQNFV 222

Query: 235 YLISDGSRYMTGTTIYVDG 253
             I        G    +D 
Sbjct: 223 KAIEA---NKNGAIWKLDL 238

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  100 bits (250), Expect = 5e-26
 Identities = 46/258 (17%), Positives = 93/258 (36%), Gaps = 18/258 (6%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           +  L+T     I   IA  L K G R+ +    E  L +  +++  +   G   +    D
Sbjct: 3   EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA---GVEADGRTCD 59

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           +        +  V    +  G +D  V+            ++ ++ +  +V+ N    + 
Sbjct: 60  VRS--VPEIEALVAAVVERYGPVDVLVNNAGRP-GGGATAELADELWLDVVETNLTGVFR 116

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           + K V +     + G   +   +  G  +     AA Y A    +    +   +E+ +  
Sbjct: 117 VTKQVLKAGGMLERGTGRIVNIASTG-GKQGVVHAAPYSASKHGVVGFTKALGLELARTG 175

Query: 185 IRVNGIARGL-------HLQDEYPIAVGQ--ERAVKLVREAAPLHRWLDVKNDLASTVIY 235
           I VN +  G         +++ Y        E A   +    P+ R++    ++A  V Y
Sbjct: 176 ITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPS-EVAEMVAY 234

Query: 236 LISDGSRYMTGTTIYVDG 253
           LI  G+  +T   + V G
Sbjct: 235 LIGPGAAAVTAQALNVCG 252

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 99.7 bits (248), Expect = 7e-26
 Identities = 50/252 (19%), Positives = 95/252 (37%), Gaps = 27/252 (10%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K VL+ +    I + +A  L++ G  + +   NE  L                   V  D
Sbjct: 5   KGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGH------------RYVVCD 52

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           + +D        +D   + +  +D  V       K     ++  ++FK+ +   F+    
Sbjct: 53  LRKD--------LDLLFEKVKEVDILVLN-AGGPKAGFFDELTNEDFKEAIDSLFLNMIK 103

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           +++     MKE   G  +    +                +   ++   ++T + E+  + 
Sbjct: 104 IVRNYLPAMKEKGWGRIVA--ITSFSVISP-IENLYTSNSARMALTGFLKTLSFEVAPYG 160

Query: 185 IRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
           I VN +A G    +     +  E   K V    P+ R    + ++AS V +L S+ + Y+
Sbjct: 161 ITVNCVAPGWTETERVK-ELLSEEKKKQVESQIPMRRMAKPE-EIASVVAFLCSEKASYL 218

Query: 245 TGTTIYVDGAQS 256
           TG TI VDG  S
Sbjct: 219 TGQTIVVDGGLS 230

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 98.3 bits (244), Expect = 4e-25
 Identities = 50/256 (19%), Positives = 100/256 (39%), Gaps = 15/256 (5%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG--NERRLSSVAEKMMGSLKGGQPVEVVGL 63
           K V++T     + K++A   A    ++V+     E   +SV E++    K G     V  
Sbjct: 8   KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIK---KVGGEAIAVKG 64

Query: 64  DM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVA 121
           D+  E D       A+ +     G LD  ++            ++   ++ K++  N   
Sbjct: 65  DVTVESDVINLVQSAIKE----FGKLDVMINNAGL-ENPVSSHEMSLSDWNKVIDTNLTG 119

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
            +   +   +   E+   G+++ ++S+   E+  +P    Y A    +  +  T A+E  
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSV--HEKIPWPLFVHYAASKGGMKLMTETLALEYA 177

Query: 182 KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 241
              IRVN I  G                   V    P+    + + ++A+   +L S  +
Sbjct: 178 PKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPE-EIAAVAAWLASSEA 236

Query: 242 RYMTGTTIYVDGAQSI 257
            Y+TG T++ DG  ++
Sbjct: 237 SYVTGITLFADGGMTL 252

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 97.6 bits (242), Expect = 6e-25
 Identities = 54/268 (20%), Positives = 103/268 (38%), Gaps = 22/268 (8%)

Query: 1   MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVE 59
           M    K  L+T     I +  A    + G R+ +   N     + A ++      G    
Sbjct: 1   MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI------GPAAC 54

Query: 60  VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINF 119
            + LD+ +  + + D  V +     G++D  V+       +   +++  + + +L  IN 
Sbjct: 55  AIALDVTD--QASIDRCVAELLDRWGSIDILVNNAALFD-LAPIVEITRESYDRLFAINV 111

Query: 120 VAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME 179
               F+++AV R M      G  +   +     RG       Y A  A++  L ++A + 
Sbjct: 112 SGTLFMMQAVARAMIA-GGRGGKIINMASQAGRRGEAL-VGVYCATKAAVISLTQSAGLN 169

Query: 180 IGKHKIRVNGIARGLHLQDEY---------PIAVGQERAVKLVREAAPLHRWLDVKNDLA 230
           + +H I VN IA G+   + +            + +    + V  A P  R    + DL 
Sbjct: 170 LIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAE-DLT 228

Query: 231 STVIYLISDGSRYMTGTTIYVDGAQSIT 258
              I+L +  + Y+   T  VDG   ++
Sbjct: 229 GMAIFLATPEADYIVAQTYNVDGGNWMS 256

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 96.7 bits (240), Expect = 1e-24
 Identities = 56/253 (22%), Positives = 101/253 (39%), Gaps = 19/253 (7%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K +L+T     I +      A+ G  LV V   ER L+     +            V  D
Sbjct: 6   KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL------EAEAIAVVAD 59

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           + +    A +    +A +  G L    H             +  + ++K++++N    + 
Sbjct: 60  VSD--PKAVEAVFAEALEEFGRLHGVAHFAGV-AHSALSWNLPLEAWEKVLRVNLTGSFL 116

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           + +  G  ++E  +      +  +         G A Y A    +  L RT A+E+ +  
Sbjct: 117 VARKAGEVLEEGGSLVLTGSVAGLG------AFGLAHYAAGKLGVVGLARTLALELARKG 170

Query: 185 IRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
           +RVN +  GL        A     A +    A+PL R    + ++A   ++L+S+ S Y+
Sbjct: 171 VRVNVLLPGLIQTP--MTAGLPPWAWEQEVGASPLGRAGRPE-EVAQAALFLLSEESAYI 227

Query: 245 TGTTIYVDGAQSI 257
           TG  +YVDG +SI
Sbjct: 228 TGQALYVDGGRSI 240

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 95.3 bits (236), Expect = 6e-24
 Identities = 56/258 (21%), Positives = 98/258 (37%), Gaps = 17/258 (6%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           K  ++T     I   IA  LA +G  +VL G     ++  EK+   L     V+V+    
Sbjct: 5   KVAVVTGSTSGIGLGIATALAAQGADIVLNG--FGDAAEIEKVRAGLAAQHGVKVLYDGA 62

Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 125
           +  +  A    VD A + +G +D  V+      +    ++    E    +    ++  F 
Sbjct: 63  DLSKGEAVRGLVDNAVRQMGRIDILVNNAGI--QHTALIEDFPTEKWDAILALNLSAVFH 120

Query: 126 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 185
             A      + +  G I+ + S  G         +AY A    +    +  A+E     I
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVA--SANKSAYVAAKHGVVGFTKVTALETAGQGI 178

Query: 186 RVNGIARG----------LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY 235
             N I  G          +    E      +  A +L+ E  P  +++  +  L  T ++
Sbjct: 179 TANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPE-QLGGTAVF 237

Query: 236 LISDGSRYMTGTTIYVDG 253
           L SD +  +TGTT+ VDG
Sbjct: 238 LASDAAAQITGTTVSVDG 255

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 93.9 bits (233), Expect = 1e-23
 Identities = 41/244 (16%), Positives = 84/244 (34%), Gaps = 22/244 (9%)

Query: 17  ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDE 75
                A  L++ G  +     + ++   +           +    +    E++     + 
Sbjct: 12  GGMGSALRLSEAGHTVACHDESFKQKDELE-------AFAETYPQLKPMSEQEPAELIEA 64

Query: 76  AVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 135
                    G +D  V    +  + Q   +   ++++  V+   + P+ L+ AV  +MK+
Sbjct: 65  VTSA----YGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKK 120

Query: 136 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH 195
            K   S   +        G +   + Y +  A    L    + E+G++ I V  I     
Sbjct: 121 RK---SGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYL 177

Query: 196 LQDEYPIAVGQER------AVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTI 249
             ++ P     E        V  V++   L R    K +L   V +L S    Y+TG   
Sbjct: 178 HSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQK-ELGELVAFLASGSCDYLTGQVF 236

Query: 250 YVDG 253
           ++ G
Sbjct: 237 WLAG 240

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 92.8 bits (230), Expect = 3e-23
 Identities = 55/249 (22%), Positives = 98/249 (39%), Gaps = 21/249 (8%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K  L++     +  +    +   G ++V     +    ++A ++            V LD
Sbjct: 7   KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL------ADAARYVHLD 60

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           + +     +  AVD A    G L   V+       +         E+++++ +N    + 
Sbjct: 61  VTQ--PAQWKAAVDTAVTAFGGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFL 117

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
            ++AV + MKE    GSI+ ++SI G           Y A   ++  L ++ A+E+G   
Sbjct: 118 GIRAVVKPMKE-AGRGSIINISSIEGLAG--TVACHGYTATKFAVRGLTKSTALELGPSG 174

Query: 185 IRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
           IRVN I  G        +       V        L R  +   ++++ V+YL SD S Y 
Sbjct: 175 IRVNSIHPG-------LVKTPMTDWVPEDIFQTALGRAAEPV-EVSNLVVYLASDESSYS 226

Query: 245 TGTTIYVDG 253
           TG    VDG
Sbjct: 227 TGAEFVVDG 235

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 92.2 bits (228), Expect = 5e-23
 Identities = 50/261 (19%), Positives = 95/261 (36%), Gaps = 26/261 (9%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           +  L+T     + +  A  L  RG R+V++   R             +G   + V G   
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRR-------------EGEDLIYVEGDVT 48

Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 125
            E+          +   +   +         E  +      G + F++++++N +  + +
Sbjct: 49  REEDVRRAVARAQEEAPLFAVVS-AAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNV 107

Query: 126 LKAVGRRMKE-----SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
           L+     M+E         G IV   S+         G AAY A    +  L   AA E+
Sbjct: 108 LRLAAWAMRENPPDAEGQRGVIVNTASVAA--FEGQIGQAAYAASKGGVVALTLPAAREL 165

Query: 181 GKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG 240
               IRV  +A GL           + +A  L  +     R    + + A+ V++++ + 
Sbjct: 166 AGWGIRVVTVAPGLFDTPLLQGLPEKAKA-SLAAQVPFPPRLGRPE-EYAALVLHILEN- 222

Query: 241 SRYMTGTTIYVDGAQSITRPR 261
              + G  + +DGA  +  PR
Sbjct: 223 -PMLNGEVVRLDGALRM-APR 241

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 91.3 bits (226), Expect = 1e-22
 Identities = 59/249 (23%), Positives = 104/249 (41%), Gaps = 13/249 (5%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K  ++T  G  I K IA   A  G  +V+   N    + V +++    + G        D
Sbjct: 12  KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQ---QLGGQAFACRCD 68

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           +    E       D A   LG +D  V+     G    P  +   +F++  ++N  + + 
Sbjct: 69  ITS--EQELSALADFAISKLGKVDILVNNAGGGGP--KPFDMPMADFRRAYELNVFSFFH 124

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           L + V   M+++      V LT    A         +Y +  A+   LVR  A ++G+  
Sbjct: 125 LSQLVAPEMEKNG---GGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKN 181

Query: 185 IRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
           IRVNGIA G  L D    +V      + + +  P+ R    + D+A+  ++L S  + ++
Sbjct: 182 IRVNGIAPGAILTDALK-SVITPEIEQKMLQHTPIRRLGQPQ-DIANAALFLCSPAASWV 239

Query: 245 TGTTIYVDG 253
           +G  + V G
Sbjct: 240 SGQILTVSG 248

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 91.0 bits (225), Expect = 2e-22
 Identities = 63/258 (24%), Positives = 104/258 (40%), Gaps = 19/258 (7%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K  L+T  G  I K IA  L K G  + +   N+    +VA ++    + G     V +D
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEIN---QAGGHAVAVKVD 58

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
           + +        AV++A + LG  D  V+             +  +   K+  IN     +
Sbjct: 59  VSD--RDQVFAAVEQARKTLGGFDVIVNNAGVA-PSTPIESITPEIVDKVYNINVKGVIW 115

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
            ++A     K+   GG I+   S  G      P  A Y +   ++  L +TAA ++    
Sbjct: 116 GIQAAVEAFKKEGHGGKIINACSQAG--HVGNPELAVYSSSKFAVRGLTQTAARDLAPLG 173

Query: 185 IRVNGIARGL-------HLQDEYPIAVGQ--ERAVKLVREAAPLHRWLDVKNDLASTVIY 235
           I VNG   G+        +  +   A G+          +   L R  + + D+A+ V Y
Sbjct: 174 ITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPE-DVAACVSY 232

Query: 236 LISDGSRYMTGTTIYVDG 253
           L S  S YMTG ++ +DG
Sbjct: 233 LASPDSDYMTGQSLLIDG 250

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 89.5 bits (221), Expect = 7e-22
 Identities = 38/257 (14%), Positives = 80/257 (31%), Gaps = 17/257 (6%)

Query: 6   KRVLLTSDGDEISKNIAFHLAK---RGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVV 61
              +LT       + +A  LA+    G  +++   +E  L  + E++ G+ +    V + 
Sbjct: 7   AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEEL-GAQQPDLKVVLA 65

Query: 62  GLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKI 117
             D+  E   +       +            ++     G +           E      +
Sbjct: 66  AADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWAL 125

Query: 118 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAA 177
           N  +   L        ++S      V   S + A +  Y G   Y A  A+   L +  A
Sbjct: 126 NLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP-YKGWGLYCAGKAARDMLYQVLA 184

Query: 178 MEIGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI 234
            E  +  +RV   A G     +Q               +++       +D     A  ++
Sbjct: 185 AE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCG-TSAQKLL 241

Query: 235 YLISDGSRYMTGTTIYV 251
            L+   + + +G  +  
Sbjct: 242 GLLQKDT-FQSGAHVDF 257

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 85.9 bits (212), Expect = 1e-20
 Identities = 42/247 (17%), Positives = 86/247 (34%), Gaps = 23/247 (9%)

Query: 8   VLLTSDGDEISKNIAFHLAKRGCRL-----VLVGNERRLSSVAEKMMGSLKGGQPVEVVG 62
           +L+T  G  I + IA   A+          VLV + R  + + +  +     G   + + 
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 63

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
            D+ +              +  G++D  V+      +      + E++F   +  N    
Sbjct: 64  ADISD--MADVRRLTTHIVERYGHIDCLVNNAGVG-RFGALSDLTEEDFDYTMNTNLKGT 120

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 182
           +FL +A+   M+   +G       + + A +  +  ++ Y         LV T  +   K
Sbjct: 121 FFLTQALFALMERQHSGHIFF--ITSVAATKA-FRHSSIYCMSKFGQRGLVETMRLYARK 177

Query: 183 HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 242
             +R+  +          P AV      K+  E       +  + D+A+ V+      SR
Sbjct: 178 CNVRITDVQ---------PGAVYTPMWGKVDDEMQA--LMMMPE-DIAAPVVQAYLQPSR 225

Query: 243 YMTGTTI 249
            +    I
Sbjct: 226 TVVEEII 232

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.8 bits (212), Expect = 1e-20
 Identities = 39/193 (20%), Positives = 70/193 (36%), Gaps = 13/193 (6%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           + VL+T  G  I +  A+  AK   +LVL   N+  L   A K  G    G  V    +D
Sbjct: 8   EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL---GAKVHTFVVD 64

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
                      +  K    +G++   V+         D     + + +K  ++N +A ++
Sbjct: 65  CSN--REDIYSSAKKVKAEIGDVSILVNNA-GVVYTSDLFATQDPQIEKTFEVNVLAHFW 121

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
             KA    M ++   G IV + S  G      P   AY +   +     +T   E+   +
Sbjct: 122 TTKAFLPAMTKNN-HGHIVTVASAAG--HVSVPFLLAYCSSKFAAVGFHKTLTDELAALQ 178

Query: 185 ---IRVNGIARGL 194
              ++   +    
Sbjct: 179 ITGVKTTCLCPNF 191

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 84.8 bits (209), Expect = 2e-20
 Identities = 51/252 (20%), Positives = 96/252 (38%), Gaps = 22/252 (8%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           + VL+T     I   IA  LA  G ++ +                    G P  + G+++
Sbjct: 8   RSVLVTGGNRGIGLAIAQRLAADGHKVAVTH---------------RGSGAPKGLFGVEV 52

Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 125
           +     A D A     +  G ++  V            +++ E++F+K++  N    + +
Sbjct: 53  DVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLS-ADAFLMRMTEEKFEKVINANLTGAFRV 111

Query: 126 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 185
            +   R M+ +K G  I      +    G+   A    + A  +  + R+ A E+ K  +
Sbjct: 112 AQRASRSMQRNKFGRMIF--IGSVSGLWGIGNQANYAASKAG-VIGMARSIARELSKANV 168

Query: 186 RVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMT 245
             N +A G    D        ER  +   +  P  R      ++A  V +L S+ + Y++
Sbjct: 169 TANVVAPGYIDTD--MTRALDERIQQGALQFIPAKRVGTPA-EVAGVVSFLASEDASYIS 225

Query: 246 GTTIYVDGAQSI 257
           G  I VDG   +
Sbjct: 226 GAVIPVDGGMGM 237

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 83.6 bits (205), Expect = 1e-19
 Identities = 49/255 (19%), Positives = 92/255 (36%), Gaps = 10/255 (3%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
           K+ L+   ++   I+  IA     +G  L        L      +    +      V  L
Sbjct: 6   KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPI---AQELNSPYVYEL 62

Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
           D+   +E  F    +   + LG+LD  VH   +  K      + E           ++ +
Sbjct: 63  DV--SKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVY 120

Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 183
            L++           G S++  T                G   A++   VR  A+++GKH
Sbjct: 121 SLIELTNTLKPLLNNGASVL--TLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKH 178

Query: 184 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 243
            IRVN ++ G                +K     APL + + ++ ++ +  +YL+S  S  
Sbjct: 179 HIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLE-EVGNAGMYLLSSLSSG 237

Query: 244 MTGTTIYVDGAQSIT 258
           ++G   +VD    + 
Sbjct: 238 VSGEVHFVDAGYHVM 252

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.6 bits (195), Expect = 2e-18
 Identities = 40/253 (15%), Positives = 81/253 (32%), Gaps = 17/253 (6%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
              ++T     +    A  L  +G   VL+        + A+K+     G   V      
Sbjct: 6   LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADV 60

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK--MQDPLQVGEDEFKKLVKINFVAP 122
             E                +                 ++       ++F++++ +N +  
Sbjct: 61  TSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGT 120

Query: 123 WFLLKAVGRRMKES----KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAM 178
           + +++ V   M ++         ++  T+ + A  G   G AAY A    I  +    A 
Sbjct: 121 FNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG-QVGQAAYSASKGGIVGMTLPIAR 179

Query: 179 EIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 238
           ++    IRV  IA GL       +    E+    +    P    L    + A  V  +I 
Sbjct: 180 DLAPIGIRVMTIAPGLF--GTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIE 237

Query: 239 DGSRYMTGTTIYV 251
             + ++ G  I +
Sbjct: 238 --NPFLNGEVIRL 248

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 79.1 bits (194), Expect = 3e-18
 Identities = 37/259 (14%), Positives = 70/259 (27%), Gaps = 34/259 (13%)

Query: 4   QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGL 63
           +A+RVL+      +          R   +  +       + A               V +
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASAS--------------VIV 46

Query: 64  DMEEDREGAFDEAVDKACQILGN--LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVA 121
            M +      D+   +  ++LG+  +DA +             +        + K +   
Sbjct: 47  KMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWT 106

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
                    + +KE               A  G  PG   YG    ++HQL ++ A +  
Sbjct: 107 STISSHLATKHLKEGGLLTLA----GAKAALDG-TPGMIGYGMAKGAVHQLCQSLAGKNS 161

Query: 182 --KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD 239
                     +           +     R        A    W  ++  L  T    I+ 
Sbjct: 162 GMPSGAAAIAVLPV-------TLDTPMNRKS---MPEADFSSWTPLE-FLVETFHDWITG 210

Query: 240 GSRYMTGTTIYVDGAQSIT 258
             R  +G+ I V      T
Sbjct: 211 NKRPNSGSLIQVVTTDGKT 229

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.4 bits (192), Expect = 1e-17
 Identities = 43/285 (15%), Positives = 87/285 (30%), Gaps = 32/285 (11%)

Query: 5   AKRV-LLTSDGDEISKNIAFHLAKRGCRLVLVG----NERRLSSVAEKMMGSLKGGQPVE 59
           A+ V L+T     I  ++A  LA    +   V     + +    + E           +E
Sbjct: 1   ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLE 60

Query: 60  VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINF 119
            + LD+ +              ++       + C    G +     +GED    ++ +N 
Sbjct: 61  TLQLDVRD-----SKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNV 115

Query: 120 VAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME 179
           V    +L+A    MK   +G  +V  T  +G   G  P    Y A   ++  L  + A+ 
Sbjct: 116 VGTVRMLQAFLPDMKRRGSGRVLV--TGSVGGLMG-LPFNDVYCASKFALEGLCESLAVL 172

Query: 180 IGKHKIRVNGIARGL---------------HLQDEYPIAVGQERAVKLVREAAPLHRWLD 224
           +    + ++ I  G                 L         +        +        +
Sbjct: 173 LLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQN 232

Query: 225 VKNDLASTVIYLISDGS---RYMTGTTIYVDGAQSITRPRMRSYM 266
            + ++A   +  +       RY T           +  P   +Y+
Sbjct: 233 PE-EVAEVFLTALRAPKPTLRYFTTERFLPLLRMRLDDPSGSNYV 276

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.5 bits (190), Expect = 2e-17
 Identities = 49/263 (18%), Positives = 100/263 (38%), Gaps = 26/263 (9%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLD 64
           K+V++T     I + +A+HLAK G  +V+   ++  L  V                  + 
Sbjct: 15  KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSH----CLELGAASAHYIA 70

Query: 65  MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 124
              +     ++ V +A +++G LD  +  +       +         +K +++NF++   
Sbjct: 71  GTMEDMTFAEQFVAQAGKLMGGLDMLILNH-ITNTSLNLFHDDIHHVRKSMEVNFLSYVV 129

Query: 125 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 184
           L  A    +K  ++ GSIV   S +  +   YP  AAY A   ++     +   E    +
Sbjct: 130 LTVAALPMLK--QSNGSIVV-VSSLAGKVA-YPMVAAYSASKFALDGFFSSIRKEYSVSR 185

Query: 185 --IRVNGIARGLHLQD---------EYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTV 233
             + +     GL   +          +  A  +E     + +   L +  +V  D +   
Sbjct: 186 VNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQE-EVYYDSSLWT 244

Query: 234 IYLISDGSR----YMTGTTIYVD 252
             LI + SR    ++  T+  +D
Sbjct: 245 TLLIRNPSRKILEFLYSTSYNMD 267

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 75.5 bits (184), Expect = 1e-16
 Identities = 60/275 (21%), Positives = 101/275 (36%), Gaps = 37/275 (13%)

Query: 17  ISKNIAFHLAKRGCRLVLVG--NERRLSSVAE-------------KMMGSLKGGQPVEVV 61
           + ++IA  L   G  + L    +    ++++              +   S     PV   
Sbjct: 14  LGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGA 73

Query: 62  GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG-------------KMQDPLQVGE 108
                        E V       G  D  V+  +                      +  E
Sbjct: 74  DGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAME 133

Query: 109 DEFKKLVKINFVAPWFLLKAVGRRMKES---KAGGSIVFLTSIIGAERGLYPGAAAYGAC 165
                L   N +AP+FL+KA   R+  +     G +   +  +         G   Y   
Sbjct: 134 TATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMA 193

Query: 166 AASIHQLVRTAAMEIGKHKIRVNGIARGLH-LQDEYPIAVGQERAVKLVREAAPLHRWLD 224
             ++  L R+AA+E+   +IRVNG+  GL  L D+ P AV +       R   PL++   
Sbjct: 194 KGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEG-----HRSKVPLYQRDS 248

Query: 225 VKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 259
              +++  VI+L S  ++Y+TGT + VDG  S+TR
Sbjct: 249 SAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 283

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 73.8 bits (180), Expect = 3e-16
 Identities = 49/262 (18%), Positives = 91/262 (34%), Gaps = 16/262 (6%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
             ++++     I       L   G ++V +    R + V       L   +  +    D+
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGID--IRDAEVIAD----LSTAEGRKQAIADV 55

Query: 66  EEDREGAFDEAVDKAC-----QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFV 120
                   D  V  A      ++LGN+ +  +    E        + +      V I+ V
Sbjct: 56  LAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSV 115

Query: 121 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 180
           A   L           +  G      +I+    G   G  AY     ++   VR  A   
Sbjct: 116 ASAHLAFDKNPLALALE-AGEEAKARAIVEH-AGEQGGNLAYAGSKNALTVAVRKRAAAW 173

Query: 181 GKHKIRVNGIARGLHLQDEYPIAVGQERAVK-LVREAAPLHRWLDVKNDLASTVIYLISD 239
           G+  +R+N IA G          +   R  + + +   P+ R  +   ++AS + +L+S 
Sbjct: 174 GEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPS-EMASVIAFLMSP 232

Query: 240 GSRYMTGTTIYVDGAQS-ITRP 260
            + Y+ G  I +DG    + RP
Sbjct: 233 AASYVHGAQIVIDGGIDAVMRP 254

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 71.8 bits (175), Expect = 2e-15
 Identities = 34/206 (16%), Positives = 68/206 (33%), Gaps = 22/206 (10%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
             V++T     I   +   L K      ++   R +    E  + S+K  + V V+ L +
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE--LKSIKDSR-VHVLPLTV 60

Query: 66  EEDREGAFDEAVDKACQILG--NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
             D+  + D  V K  +I+G   L   ++            +       + + +N  +  
Sbjct: 61  TCDK--SLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVV 118

Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAER---------------GLYPGAAAYGACAAS 168
            L + +   +K + +  S   L+    A                        AY    A+
Sbjct: 119 LLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAA 178

Query: 169 IHQLVRTAAMEIGKHKIRVNGIARGL 194
           I+   RT A+++    + V     G 
Sbjct: 179 INMFGRTLAVDLKDDNVLVVNFCPGW 204

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 70.7 bits (172), Expect = 3e-15
 Identities = 24/259 (9%), Positives = 63/259 (24%), Gaps = 33/259 (12%)

Query: 5   AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGL 63
           + +V++      +   I     K G  ++ +  +    +     + G+    +  + +  
Sbjct: 2   SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILE 61

Query: 64  DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPW 123
                 +G               +D                +        ++K +  +  
Sbjct: 62  QTASSLQG-------------SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSA 108

Query: 124 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK- 182
              K     +K       +    +   A            A AA +H L  + A +    
Sbjct: 109 IAAKLATTHLKPGG---LLQLTGAA-AAMGPTPSMIGYGMAKAA-VHHLTSSLAAKDSGL 163

Query: 183 -HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI-YLISDG 240
                V  I             +            A    W  +   ++  ++ +     
Sbjct: 164 PDNSAVLTIMPVTLDTPMNRKWMPN----------ADHSSWTPLS-FISEHLLKWTTETS 212

Query: 241 SRYMTGTTIYVDGAQSITR 259
           SR  +G  + +      + 
Sbjct: 213 SRPSSGALLKITTENGTST 231

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 67.9 bits (164), Expect = 8e-14
 Identities = 50/284 (17%), Positives = 95/284 (33%), Gaps = 35/284 (12%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG----------NERRLSSVAEKMMGSLK 53
           KR  +   +D +     +A  LA  G  +++            + RR      +++    
Sbjct: 9   KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGS 68

Query: 54  GGQPVEVVGLDMEEDR------------------EGAFDEAVDKACQILGNLDAFVHCYT 95
             +  +V  LD   D                        EA +   Q  G++D  VH   
Sbjct: 69  LMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLA 128

Query: 96  YEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL 155
              ++  P     +  +K       A  +   ++          G      + I +ER +
Sbjct: 129 NGPEVSKP---LLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERII 185

Query: 156 YPGAAAYGACAASIHQLVRTAAMEIGKHK-IRVNGIARGLHLQDEYPIAVGQERAVKLVR 214
                   +  A++    R  A E G+ + IRVN I+ G             +  ++   
Sbjct: 186 PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSY 245

Query: 215 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 258
             AP+ + L    ++ +   +L+S  +  +TG TIYVD   +  
Sbjct: 246 NNAPIQKTLTAD-EVGNAAAFLVSPLASAITGATIYVDNGLNSM 288

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 67.5 bits (163), Expect = 8e-14
 Identities = 45/262 (17%), Positives = 82/262 (31%), Gaps = 21/262 (8%)

Query: 6   KRVLLT--SDGDEISKNIAFHLAKRGCRLVLVG--NERRLSSVAEKMMGSLKGGQPVEVV 61
           KR+L++       I+ +IA    ++G +LVL G    R +  + +++       +   + 
Sbjct: 7   KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-----PAKAPLLE 61

Query: 62  GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVA 121
                E+   +    V +A      LD  VH   +  +    +    D     V      
Sbjct: 62  LDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIH- 120

Query: 122 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 181
                                  +  +        P         +++  + R  A E G
Sbjct: 121 -ISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAG 179

Query: 182 KHKIRVNGIARGLHL----------QDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAS 231
           K+ +R N +A G                       +   +   + AP+   +     +A 
Sbjct: 180 KYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAK 239

Query: 232 TVIYLISDGSRYMTGTTIYVDG 253
           TV  L+SD     TG  IY DG
Sbjct: 240 TVCALLSDWLPATTGDIIYADG 261

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 64.7 bits (156), Expect = 5e-13
 Identities = 38/263 (14%), Positives = 83/263 (31%), Gaps = 37/263 (14%)

Query: 6   KRVLLTSDGDEISKNIAFHL---AKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVV 61
             +L+T     +   +   L    +    L     N  +   + +      K    + ++
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDL----AKNHSNIHIL 58

Query: 62  GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVA 121
            +D+          A  +       L+   +      K      V   E    ++ N V 
Sbjct: 59  EIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVV 118

Query: 122 PWFLLKAVGRRMKESKAG----------GSIVFLTSIIGAERG-LYPGAAAYGACAASIH 170
           P  L KA    +K++              +I+ ++SI+G+ +G    G  AY    ++++
Sbjct: 119 PIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALN 178

Query: 171 QLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLA 230
              ++ ++++   +I    +  G    D             +   +APL           
Sbjct: 179 AATKSLSVDLYPQRIMCVSLHPGWVKTD-------------MGGSSAPLDV-----PTST 220

Query: 231 STVIYLISDGSRYMTGTTIYVDG 253
             ++  IS       G  +  DG
Sbjct: 221 GQIVQTISKLGEKQNGGFVNYDG 243

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.2 bits (137), Expect = 3e-10
 Identities = 42/289 (14%), Positives = 80/289 (27%), Gaps = 75/289 (25%)

Query: 6   KRV-LLTSDGDEISKNIAFHLAKR-GCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVG 62
             V L+T     I   I   L +     +VL   +  R  +  +++       + +    
Sbjct: 3   IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQL-----QAEGLSPRF 57

Query: 63  LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAP 122
             ++ D   +     D   +  G LD  V+                 + +  +K NF   
Sbjct: 58  HQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGI-AFKVADPTPFHIQAEVTMKTNFFGT 116

Query: 123 WFLLKAVGRRMKESKAGGSIVFLTSIIG-------------------------------- 150
             +   +   +K     G +V ++SI+                                 
Sbjct: 117 RDVCTELLPLIKP---QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKF 173

Query: 151 -------AERGLYPGAAAYGACAASIHQLVRTAAMEIGKH----KIRVNGIARGLHLQDE 199
                    +     ++AYG     +  L R  A ++ +     KI +N    G    D 
Sbjct: 174 VEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD- 232

Query: 200 YPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL--ISDGSRYMTG 246
               +   +A K   E              A T +YL  +   +    G
Sbjct: 233 ----MAGPKATKSPEEG-------------AETPVYLALLPPDAEGPHG 264

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 52.6 bits (124), Expect = 1e-08
 Identities = 45/313 (14%), Positives = 84/313 (26%), Gaps = 76/313 (24%)

Query: 17  ISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEA 76
               IA  L+KR  +++        +   +           +      M       FD +
Sbjct: 16  YGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDAS 75

Query: 77  VDKACQI----------------------------LGNLDAFVHCYTYEGKMQDPLQVGE 108
            D A  I                             G ++  VH      ++Q  L    
Sbjct: 76  FDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTS 135

Query: 109 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 168
            +                  + +         S +   +   +++ +        +  A+
Sbjct: 136 RKGYLDALSKSSYSLIS---LCKYFVNIMKPQSSIISLTYHASQKVVPGYGGGMSSAKAA 192

Query: 169 IHQLVRTAAMEIGK-HKIRVNGIARGL--------------------------------- 194
           +    R  A  +G+ + IR+N I+ G                                  
Sbjct: 193 LESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHN 252

Query: 195 ----------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 244
                                 + A++   + APL + L    D+ S   +L+S  SR +
Sbjct: 253 IMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLST-DIGSVASFLLSRESRAI 311

Query: 245 TGTTIYVDGAQSI 257
           TG TIYVD   +I
Sbjct: 312 TGQTIYVDNGLNI 324

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 43.0 bits (100), Expect = 1e-05
 Identities = 26/189 (13%), Positives = 53/189 (28%), Gaps = 22/189 (11%)

Query: 6   KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM 65
           K+ ++ +    +    A  LA  G     V    R    A+    S+     V V   + 
Sbjct: 24  KKAVVLAGTGPVGMRSAALLAGEGAE---VVLCGRKLDKAQAAADSVNKRFKVNVTAAET 80

Query: 66  EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 125
            +D             + +              ++       +  ++    I  VA +  
Sbjct: 81  ADDAS---------RAEAVKGAHFVFTAGAIGLELLP-----QAAWQNESSIEIVADYNA 126

Query: 126 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 185
              +G    ++   G         GA   L  G        A I +L  ++       +I
Sbjct: 127 QPPLGIGGIDATDKGKEYGGKRAFGA---LGIGGLKLKLHRACIAKLFESSEGVFDAEEI 183

Query: 186 RVNGIARGL 194
               +A+ +
Sbjct: 184 Y--KLAKEM 190

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	266
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.81
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.8
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.76
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.72
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.72
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.7
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.68
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.67
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.67
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.67
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.67
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.67
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.65
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.64
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.64
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.63
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.63
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.61
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.6
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.57
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.57
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.56
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.54
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.51
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.21
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.19
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.19
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.15
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.13
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.09
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.02
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.78
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.91
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.85
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.81
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.8
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.8
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.78
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.76
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.76
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.75
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.72
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.72
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.7
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.69
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.6
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.57
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.52
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.5
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.49
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.48
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.47
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.43
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.39
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.36
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.34
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.34
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.33
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.32
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.28
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.27
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.19
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.17
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.11
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.09
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.03
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.02
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.0
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.99
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.98
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.98
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.98
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.97
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.91
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.88
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.84
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.84
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.83
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.8
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.79
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.73
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.71
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.7
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.7
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.7
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.69
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.69
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.67
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.58
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.47
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.45
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.42
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.39
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.27
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.18
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.06
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.05
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.03
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.02
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.01
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.94
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.93
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.93
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.89
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.86
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.85
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.82
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.79
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.69
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.68
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.66
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.49
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.47
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.46
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.33
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.3
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.02
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.99
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	94.86
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	94.79
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	94.58
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.21
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	94.07
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	94.03
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.02
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	93.98
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	93.96
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	93.94
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.88
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	93.65
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	93.6
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	93.4
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	93.38
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.17
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	93.16
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	92.87
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	92.85
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	92.75
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	92.67
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	92.66
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	92.65
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	92.61
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	92.57
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	92.5
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	92.48
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	92.44
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	92.4
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	92.4
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	92.39
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	92.32
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	92.28
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	92.25
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	92.11
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	91.95
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	91.91
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.85
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	91.71
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	91.5
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	91.5
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	91.42
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	91.26
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	91.19
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	91.17
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	91.13
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	91.06
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	90.96
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	90.95
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	90.66
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	90.6
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	90.59
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	90.56
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	90.55
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	90.41
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	90.16
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	90.12
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	90.04
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	90.03
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	89.72
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	89.69
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	89.64
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	89.62
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	89.57
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	89.49
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	89.45
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	89.42
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	89.33
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	89.28
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	89.2
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	89.17
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	89.16
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	89.07
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	89.03
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	88.86
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	88.84
d1dbwa_	123	Transcriptional regulatory protein FixJ, receiver	88.84
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	88.62
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	88.43
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	88.15
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	88.08
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	87.28
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	87.12
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	87.09
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	87.08
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	86.78
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	86.67
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	86.56
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	86.19
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	85.82
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	85.23
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	85.12
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	84.8
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	84.73
d1ny5a1	137	Transcriptional activator sigm54 (NtrC1), N-termin	84.53
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	84.51
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	84.38
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	84.36
d1mvoa_	121	PhoP receiver domain {Bacillus subtilis [TaxId: 14	83.51
d1ys7a2	121	Transcriptional regulatory protein PrrA, N-termina	83.21
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	83.16
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	83.0
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	82.86
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	82.85
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	82.85
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	82.72
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	82.64
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	82.61
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	82.35
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	82.1
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	81.99
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	81.81
d2pl1a1	119	PhoP receiver domain {Escherichia coli [TaxId: 562	81.48
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	81.44
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	81.3
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	81.26
d1vb3a1	428	Threonine synthase {Escherichia coli [TaxId: 562]}	81.05
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	80.69
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	80.66
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	80.44
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	80.3
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	80.21

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=5.7e-59  Score=382.35  Aligned_cols=248  Identities=23%  Similarity=0.357  Sum_probs=229.1

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++|+||++|||||++|||+++|++|+++|++|++++ +.+++++..+++.+.++  .++.++.+|+++++  ++++++++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g--~~~~~~~~Dv~~~~--~v~~~~~~   76 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG--VETMAFRCDVSNYE--EVKKLLEA   76 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTCHH--HHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhC--CcEEEEEccCCCHH--HHHHHHHH
Confidence            589999999999999999999999999999999999 77888888888765543  58999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.++||+||++|||||. ....++.+.+.++|++.+++|+.++++++|.++|+|++++ .|+||+++|..+...+ .++.
T Consensus        77 ~~~~~g~iDiLVnnAG~-~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i~S~~~~~~~-~~~~  153 (251)
T d1vl8a_          77 VKEKFGKLDTVVNAAGI-NRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVT-MPNI  153 (251)
T ss_dssp             HHHHHSCCCEEEECCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCC-SSSC
T ss_pred             HHHHcCCCCEEEECCCC-CCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-cccccccccchhcccc-Cccc
Confidence            99999999999999998 5678899999999999999999999999999999999887 7999999998765432 5788


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      .+|+++|+|+++|+|+++.|++++|||||+|+||+|+||+......+++..+.+.+..|++|+++|+ |+|+.++||+|+
T Consensus       154 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-dvA~~v~fL~S~  232 (251)
T d1vl8a_         154 SAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPE-DLKGVAVFLASE  232 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGG-GGHHHHHHHHSG
T ss_pred             cchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHhCc
Confidence            9999999999999999999999999999999999999999987766677777888899999999998 999999999999


Q ss_pred             CCCcccccEEEEcCCcc
Q 024517          240 GSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~  256 (266)
                      .++|+|||+|.+|||++
T Consensus       233 ~a~~itG~~i~vDGG~t  249 (251)
T d1vl8a_         233 EAKYVTGQIIFVDGGWT  249 (251)
T ss_dssp             GGTTCCSCEEEESTTGG
T ss_pred             hhCCCcCcEEEeCcCee
Confidence            99999999999999986

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3.6e-58  Score=377.75  Aligned_cols=244  Identities=23%  Similarity=0.346  Sum_probs=223.5

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++|++|++|||||++|||+++|++|+++|++|++++ +.++++++.+++.+.   +.++..+.+|+++++  ++++++++
T Consensus         6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~---g~~~~~~~~Dvt~~~--~v~~~~~~   80 (251)
T d2c07a1           6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF---GYESSGYAGDVSKKE--EISEVINK   80 (251)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT---TCCEEEEECCTTCHH--HHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEccCCCHH--HHHHHHHH
Confidence            468999999999999999999999999999999999 778888888888754   468999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.++||+||++|||||. ....++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||+|||.++..+  .++.
T Consensus        81 ~~~~~g~iDilvnnag~-~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~--~~~~  156 (251)
T d2c07a1          81 ILTEHKNVDILVNNAGI-TRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTG--NVGQ  156 (251)
T ss_dssp             HHHHCSCCCEEEECCCC-CCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHC--CTTC
T ss_pred             HHHhcCCceeeeecccc-ccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhcCC--CCCC
Confidence            99999999999999998 5667888999999999999999999999999999999887 799999999999887  6899


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      .+|+++|+|+++|+|+++.|++++|||||+|+||+|+|++....  .++..+.+.+..|++|+++|+ |+|+.+.||+|+
T Consensus       157 ~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pe-dvA~~v~fL~S~  233 (251)
T d2c07a1         157 ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPE-EVANLACFLSSD  233 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C--CHHHHHHHHTTCTTSSCBCHH-HHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc--CHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCc
Confidence            99999999999999999999999999999999999999998764  456677788899999999998 999999999999


Q ss_pred             CCCcccccEEEEcCCcc
Q 024517          240 GSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~  256 (266)
                      .++|+|||+|.+|||++
T Consensus       234 ~s~~itG~~i~vDGG~s  250 (251)
T d2c07a1         234 KSGYINGRVFVIDGGLS  250 (251)
T ss_dssp             GGTTCCSCEEEESTTSC
T ss_pred             hhCCCcCcEEEECCCcC
Confidence            99999999999999976

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=3.7e-58  Score=379.42  Aligned_cols=249  Identities=18%  Similarity=0.278  Sum_probs=228.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      +|+||++|||||++|||+++|++|+++|++|++++ +. +.++++.+++++.   +.++..+.+|+++++  ++++++++
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~---g~~~~~~~~Dvt~~~--~v~~~~~~   78 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV---GGEAIAVKGDVTVES--DVINLVQS   78 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCEEEEEECCTTSHH--HHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc---CCcEEEEEccCCCHH--HHHHHHHH
Confidence            58999999999999999999999999999999999 44 3567777777654   468999999999998  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.++||+||++|||||. ....++.+.+.++|++++++|+.++++++|+++|+|.+++.++.|+++||.++..+  .++.
T Consensus        79 ~~~~~G~iDiLVnnAG~-~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~--~~~~  155 (261)
T d1geea_          79 AIKEFGKLDVMINNAGL-ENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP--WPLF  155 (261)
T ss_dssp             HHHHHSCCCEEEECCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC--CTTC
T ss_pred             HHHHhCCCCEeecccee-cCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhccc--Cccc
Confidence            99999999999999998 45678899999999999999999999999999999988775567999999998777  6899


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      .+|+++|+|+++|+|+++.|++++|||||+|+||+|+||+......+++....+.+..|++|+++|+ |+|++++||+|+
T Consensus       156 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-diA~~v~fL~S~  234 (261)
T d1geea_         156 VHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPE-EIAAVAAWLASS  234 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHH-HHHHHHHHHHSG
T ss_pred             cccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHhCc
Confidence            9999999999999999999999999999999999999999877666677778888999999999998 999999999999


Q ss_pred             CCCcccccEEEEcCCccccC
Q 024517          240 GSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~~  259 (266)
                      .++++|||+|.+|||++++.
T Consensus       235 ~s~~itG~~i~vDGG~sl~p  254 (261)
T d1geea_         235 EASYVTGITLFADGGMTLYP  254 (261)
T ss_dssp             GGTTCCSCEEEESTTGGGCG
T ss_pred             hhcCCcCCeEEECCCeeCCC
Confidence            99999999999999999863

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=4.2e-58  Score=378.56  Aligned_cols=246  Identities=23%  Similarity=0.372  Sum_probs=223.8

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |+|+||++|||||++|||+++|++|+++|++|++++ +.++++++.+++      +.++.++.+|+++++  ++++++++
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~------~~~~~~~~~Dvt~~~--~v~~~~~~   72 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI------GPAACAIALDVTDQA--SIDRCVAE   72 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH------CTTEEEEECCTTCHH--HHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------CCceEEEEeeCCCHH--HHHHHHHH
Confidence            899999999999999999999999999999999999 777777777766      368899999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.++||+||++|||||. ....++.+.+.++|++.+++|+.++++++|+++|+|.+++++|+||++||..+..+  .++.
T Consensus        73 ~~~~~g~iDilVnnAg~-~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~--~~~~  149 (256)
T d1k2wa_          73 LLDRWGSIDILVNNAAL-FDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRG--EALV  149 (256)
T ss_dssp             HHHHHSCCCEEEECCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC--CTTC
T ss_pred             HHHHhCCccEEEeeccc-ccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccc--cccc
Confidence            99999999999999998 46678999999999999999999999999999998776654799999999999877  6899


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc---------cHHHHHHHhhccCCCCCCCChhhHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---------QERAVKLVREAAPLHRWLDVKNDLA  230 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva  230 (266)
                      .+|+++|+|+++|+|+++.|++++|||||+|+||+|+||++.....         .++..+.+....|++|+++|+ |+|
T Consensus       150 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~-evA  228 (256)
T d1k2wa_         150 GVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAE-DLT  228 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHH-HHH
T ss_pred             cchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHH-HHH
Confidence            9999999999999999999999999999999999999999755322         234456667889999999998 999


Q ss_pred             HHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          231 STVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      +.++||+|+.++|+|||.|.+|||.+++
T Consensus       229 ~~v~fL~S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         229 GMAIFLATPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             HHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHHHHHhCchhCCccCceEEECcchhhC
Confidence            9999999999999999999999998764

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=4.6e-58  Score=378.40  Aligned_cols=249  Identities=25%  Similarity=0.380  Sum_probs=227.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +|+||++|||||++|||+++|++|+++|++|++++ +.+++++..+++..... +.++..+.||+++++  +++++++++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~-~~~~~~~~~Dvt~~~--~v~~~~~~~   77 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAP-DAEVLTTVADVSDEA--QVEAYVTAT   77 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCT-TCCEEEEECCTTSHH--HHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC-CCeEEEEeccCCCHH--HHHHHHHHH
Confidence            47899999999999999999999999999999999 77888888888766543 368999999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .++||+||+||||||+..+..++.+.+.++|++++++|+.++++++|+++|+|++++ +|+||++||..+..+  .++..
T Consensus        78 ~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~--~~~~~  154 (258)
T d1iy8a_          78 TERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRG--IGNQS  154 (258)
T ss_dssp             HHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSB--CSSBH
T ss_pred             HHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-CCCCcccccHhhccC--CCCch
Confidence            999999999999999865667888999999999999999999999999999999877 799999999999877  68999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc------cHHHHHHHhhccCCCCCCCChhhHHHHHH
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG------QERAVKLVREAAPLHRWLDVKNDLASTVI  234 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (266)
                      +|+++|+|+.+|+|+++.|++++|||||+|+||+|+||+......      .++..+.+.+..|++|+++|+ |+|+.++
T Consensus       155 ~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~-dvA~~v~  233 (258)
T d1iy8a_         155 GYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAP-EIAAVVA  233 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHH-HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHH-HHHHHHH
Confidence            999999999999999999999999999999999999998755422      244556677889999999998 9999999


Q ss_pred             HHccCCCCcccccEEEEcCCccc
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      ||+|+.++++|||+|.+|||++-
T Consensus       234 fL~S~~s~~itG~~i~VDGG~sa  256 (258)
T d1iy8a_         234 FLLSDDASYVNATVVPIDGGQSA  256 (258)
T ss_dssp             HHTSGGGTTCCSCEEEESTTTTT
T ss_pred             HHhCchhcCCcCceEEcCcchhc
Confidence            99999999999999999999874

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.1e-58  Score=375.49  Aligned_cols=241  Identities=22%  Similarity=0.338  Sum_probs=222.6

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +|+||++|||||++|||+++|++|+++|++|++++ ++++++++.+++.      .+...+.+|+++++  +++++++++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~------~~~~~~~~Dv~~~~--~v~~~~~~~   72 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG------ANGKGLMLNVTDPA--SIESVLEKI   72 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG------GGEEEEECCTTCHH--HHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC------CCCcEEEEEecCHH--Hhhhhhhhh
Confidence            58999999999999999999999999999999999 7777777777763      47788999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .++||+||++|||||. ....++.+.+.++|++++++|+.++++++|+++|+|++++ +|+||++||.++..+  .++..
T Consensus        73 ~~~~g~iDilVnnAg~-~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~--~~~~~  148 (243)
T d1q7ba_          73 RAEFGEVDILVNNAGI-TRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVVGTMG--NGGQA  148 (243)
T ss_dssp             HHHTCSCSEEEECCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHC--CTTCH
T ss_pred             hcccCCcceehhhhhh-ccccccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecchhhcCC--CCCCH
Confidence            9999999999999998 5668899999999999999999999999999999999887 799999999999887  68999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      +|+++|+|+++|+|+++.|++++|||||+|+||+|+||+.....  ++......+..|++|+++|+ |+|+.++||+|+.
T Consensus       149 ~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~--~~~~~~~~~~~pl~R~~~pe-dvA~~v~fL~S~~  225 (243)
T d1q7ba_         149 NYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALS--DDQRAGILAQVPAGRLGGAQ-EIANAVAFLASDE  225 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC--HHHHHHHHTTCTTSSCBCHH-HHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhh--hhHHHHHHhcCCCCCCCCHH-HHHHHHHHHhCch
Confidence            99999999999999999999999999999999999999886653  44456677889999999998 9999999999999


Q ss_pred             CCcccccEEEEcCCccc
Q 024517          241 SRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~  257 (266)
                      ++++|||+|.+|||.++
T Consensus       226 s~~itGq~i~vdGG~~~  242 (243)
T d1q7ba_         226 AAYITGETLHVNGGMYM  242 (243)
T ss_dssp             GTTCCSCEEEESTTSSC
T ss_pred             hcCCcCCeEEECCCeEe
Confidence            99999999999999875

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.5e-58  Score=376.18  Aligned_cols=245  Identities=23%  Similarity=0.374  Sum_probs=225.0

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |+|+||++|||||++|||+++|++|+++|++|++++ +.++++++.+++++.   +.++.++.||+++++  ++++++++
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~---g~~~~~~~~Dvs~~~--~~~~~~~~   81 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL---GGQAFACRCDITSEQ--ELSALADF   81 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHH--HHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc---CCcEEEEEccCCCHH--HHHHHHHH
Confidence            678999999999999999999999999999999999 788889999888765   468999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.++||+||++|||||.. ...++ +.+.++|++++++|+.++++++|.++|+|.+++ +|+||++||.++..+  .++.
T Consensus        82 ~~~~~g~iDilvnnAG~~-~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~~~--~~~~  156 (255)
T d1fmca_          82 AISKLGKVDILVNNAGGG-GPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENK--NINM  156 (255)
T ss_dssp             HHHHHSSCCEEEECCCCC-CCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCC--CTTC
T ss_pred             HHHHcCCCCEeeeCCcCC-CCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchhcc--cccc
Confidence            999999999999999984 43444 789999999999999999999999999999887 789999999998877  6899


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      .+|+++|+|+++|+|+++.|++++|||||+|+||+|+||+...... ++..+.+.+..|++|+++|+ |+|++++||+|+
T Consensus       157 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~-~e~~~~~~~~~pl~R~g~pe-dvA~~v~fL~S~  234 (255)
T d1fmca_         157 TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT-PEIEQKMLQHTPIRRLGQPQ-DIANAALFLCSP  234 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCC-HHHHHHHHHTCSSCSCBCHH-HHHHHHHHHHSG
T ss_pred             ccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCC-HHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCc
Confidence            9999999999999999999999999999999999999998876553 45566677889999999998 999999999999


Q ss_pred             CCCcccccEEEEcCCccc
Q 024517          240 GSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~  257 (266)
                      .++|+|||+|.+|||...
T Consensus       235 ~s~~itG~~i~vDGG~~~  252 (255)
T d1fmca_         235 AASWVSGQILTVSGGGVQ  252 (255)
T ss_dssp             GGTTCCSCEEEESTTSCC
T ss_pred             hhcCCcCCEEEECcCccc
Confidence            999999999999999753

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=4.5e-57  Score=370.33  Aligned_cols=245  Identities=21%  Similarity=0.212  Sum_probs=207.0

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +|+||++|||||++|||+++|++|+++|++|+++++.+. ++..+.+++.   +.++.++.||+++++  +++++++++.
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~-~~~~~~~~~~---g~~~~~~~~Dvs~~~--~v~~~~~~~~   75 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA-PEAEAAIRNL---GRRVLTVKCDVSQPG--DVEAFGKQVI   75 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC-HHHHHHHHHT---TCCEEEEECCTTCHH--HHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCch-HHHHHHHHHc---CCcEEEEEeeCCCHH--HHHHHHHHHH
Confidence            588999999999999999999999999999999994332 3333444433   468999999999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      ++||+||++|||||. ....++.+.+.++|++++++|+.++++++|+++|+|++++ +|+||+|||.++..+  .++..+
T Consensus        76 ~~~G~iDilVnnAG~-~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~--~~~~~~  151 (247)
T d2ew8a1          76 STFGRCDILVNNAGI-YPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLK--IEAYTH  151 (247)
T ss_dssp             HHHSCCCEEEECCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSC--CSSCHH
T ss_pred             HHcCCCCEEEECCCC-CCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhccc--Cccccc
Confidence            999999999999998 5678899999999999999999999999999999999887 799999999999877  689999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCC
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS  241 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  241 (266)
                      |+++|+|+.+|+|+++.|++++|||||+|+||+|+||+......+...........|++|+++|+ |+|+.++||+|+.+
T Consensus       152 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pe-dvA~~v~fL~S~~s  230 (247)
T d2ew8a1         152 YISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPL-DLTGAAAFLASDDA  230 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTH-HHHHHHHHHTSGGG
T ss_pred             chhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHH-HHHHHHHHHhCchh
Confidence            99999999999999999999999999999999999999876544333333334456899999998 99999999999999


Q ss_pred             CcccccEEEEcCCccc
Q 024517          242 RYMTGTTIYVDGAQSI  257 (266)
Q Consensus       242 ~~~~G~~i~~dgG~~~  257 (266)
                      +|+|||+|.+|||.++
T Consensus       231 ~~itG~~i~vDGG~~~  246 (247)
T d2ew8a1         231 SFITGQTLAVDGGMVR  246 (247)
T ss_dssp             TTCCSCEEEESSSCCC
T ss_pred             cCCcCCeEEECCCEec
Confidence            9999999999999764

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=2.5e-57  Score=374.38  Aligned_cols=248  Identities=25%  Similarity=0.359  Sum_probs=227.1

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |+|+||++|||||++|||+++|++|+++|++|++++ +.++++++.+++.+.   +.++.++.+|+++++  ++++++++
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~---g~~~~~~~~Dv~~~~--~v~~~~~~   78 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK---GFKVEASVCDLSSRS--ERQELMNT   78 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCEEEEEECCTTCHH--HHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCCceEEEeeCCCHH--HHHHHHHH
Confidence            689999999999999999999999999999999999 778888888888765   468899999999999  99999999


Q ss_pred             HHHHhC-CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           80 ACQILG-NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        80 ~~~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      +.++++ ++|++|||||. ....++.+.+.++|++++++|+.++++++|.++|+|++++ .|+||+|||..+..+  .++
T Consensus        79 ~~~~~~~~idilvnnAG~-~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~--~~~  154 (259)
T d2ae2a_          79 VANHFHGKLNILVNNAGI-VIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALA--VPY  154 (259)
T ss_dssp             HHHHTTTCCCEEEECCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSC--CTT
T ss_pred             HHHHhCCCceEEEECCce-eccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-ccccccccccccccc--ccc
Confidence            999986 79999999998 5667899999999999999999999999999999999887 799999999999877  689


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc---HHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ---ERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      ...|+++|+|+++|+|+++.|++++|||||+|+||+|+||+.......   ++..+.+.+..|++|+++|+ |+|+.++|
T Consensus       155 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pe-dvA~~v~f  233 (259)
T d2ae2a_         155 EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPK-ELAAMVAF  233 (259)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHH-HHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHH-HHHHHHHH
Confidence            999999999999999999999999999999999999999987655433   34445667889999999998 99999999


Q ss_pred             HccCCCCcccccEEEEcCCcccc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      |+|+.++|+|||+|.+|||++..
T Consensus       234 L~S~~s~~itG~~i~VDGG~~a~  256 (259)
T d2ae2a_         234 LCFPAASYVTGQIIYVDGGLMAN  256 (259)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HhCchhCCCcCcEEEECCCeEee
Confidence            99999999999999999998753

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.3e-57  Score=375.97  Aligned_cols=249  Identities=23%  Similarity=0.303  Sum_probs=197.2

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++|+||++|||||++|||+++|++|+++|++|++++ +.++++++.+++.+.   +.++..+.||+++++  ++++++++
T Consensus         4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~---~~~~~~~~~Dv~~~~--~v~~~~~~   78 (259)
T d1xq1a_           4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK---GFQVTGSVCDASLRP--EREKLMQT   78 (259)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTSHH--HHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCceEEEeccCCCHH--HHHHHHHH
Confidence            578999999999999999999999999999999999 778888888888765   468999999999998  99999999


Q ss_pred             HHHHh-CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           80 ACQIL-GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        80 ~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      +.++| |+||++|||||. ....++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||++||..+..+  .++
T Consensus        79 ~~~~~~g~idilvnnAG~-~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~--~~~  154 (259)
T d1xq1a_          79 VSSMFGGKLDILINNLGA-IRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVS--ASV  154 (259)
T ss_dssp             HHHHHTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC------------
T ss_pred             HHHHhCCCcccccccccc-cCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-ccccccccccccccc--ccc
Confidence            99998 689999999998 4667889999999999999999999999999999999887 799999999999877  588


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ...|+++|+|+.+|+|+++.|++++|||||+|+||+|+||+..... .++..+...+..|++|+++|+ |+|+.++||+|
T Consensus       155 ~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~-~~~~~~~~~~~~pl~R~~~pe-dvA~~v~fL~S  232 (259)
T d1xq1a_         155 GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY-DDEFKKVVISRKPLGRFGEPE-EVSSLVAFLCM  232 (259)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------CCGG-GGHHHHHHHTS
T ss_pred             cccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhc-hHHHHHHHHhCCCCCCCcCHH-HHHHHHHHHhC
Confidence            8999999999999999999999999999999999999999987654 344556677889999999998 99999999999


Q ss_pred             CCCCcccccEEEEcCCccccCC
Q 024517          239 DGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                      +.++|+|||+|.+|||+++..-
T Consensus       233 ~~s~~iTG~~i~vDGG~s~~g~  254 (259)
T d1xq1a_         233 PAASYITGQTICVDGGLTVNGF  254 (259)
T ss_dssp             GGGTTCCSCEEECCCCEEETTE
T ss_pred             chhcCCcCcEEEeCCCEECCCC
Confidence            9999999999999999987643

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.6e-57  Score=369.03  Aligned_cols=240  Identities=28%  Similarity=0.394  Sum_probs=216.6

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |+|+||++|||||++|||+++|++|+++|++|++++ +.+++++..++        .+..++.||+++++  ++++++++
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~--------~~~~~~~~Dv~~~~--~v~~~~~~   70 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA--------VGAHPVVMDVADPA--SVERGFAE   70 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT--------TTCEEEECCTTCHH--HHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--------cCCeEEEEecCCHH--HHHHHHHH
Confidence            899999999999999999999999999999999999 65666555443        35678999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.++||+||++|||||. ....++.+.+.++|++++++|+.++++++|+++|+|.+++ .+.++++||. +..+  .++.
T Consensus        71 ~~~~~g~iDilVnnAG~-~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~~~i~~~ss~-~~~~--~~~~  145 (242)
T d1ulsa_          71 ALAHLGRLDGVVHYAGI-TRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASR-VYLG--NLGQ  145 (242)
T ss_dssp             HHHHHSSCCEEEECCCC-CCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCG-GGGC--CTTC
T ss_pred             HHHhcCCceEEEECCcc-cccCchhhCcchhhhccccccchhhhhhhhhccccccccc-cceeeeeccc-cccC--CCCC
Confidence            99999999999999998 4668899999999999999999999999999999998876 6777777764 4444  6889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      .+|+++|+|+++|+|+++.|++++|||||+|+||+|+|++....  .+...+......|++|+++|+ |+|+.+.||+|+
T Consensus       146 ~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pe-dia~~v~fL~S~  222 (242)
T d1ulsa_         146 ANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV--PEKVREKAIAATPLGRAGKPL-EVAYAALFLLSD  222 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS--CHHHHHHHHHTCTTCSCBCHH-HHHHHHHHHHSG
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcC--CHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHhch
Confidence            99999999999999999999999999999999999999998764  456667778899999999998 999999999999


Q ss_pred             CCCcccccEEEEcCCcccc
Q 024517          240 GSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~  258 (266)
                      .++|+|||+|.+|||+++-
T Consensus       223 ~s~~itG~~i~vDGG~t~g  241 (242)
T d1ulsa_         223 ESSFITGQVLFVDGGRTIG  241 (242)
T ss_dssp             GGTTCCSCEEEESTTTTTT
T ss_pred             hhCCCCCcEEEECCCccCC
Confidence            9999999999999999863

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.9e-57  Score=369.97  Aligned_cols=241  Identities=27%  Similarity=0.390  Sum_probs=215.5

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      |+||++|||||++|||+++|++|+++|++|+++++.++..+..+++        ...+++||+++++  +++++++++.+
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~--------~~~~~~~Dv~~~~--~v~~~~~~~~~   72 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAI--------GGAFFQVDLEDER--ERVRFVEEAAY   72 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHH--------TCEEEECCTTCHH--HHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc--------CCeEEEEeCCCHH--HHHHHHHHHHH
Confidence            7899999999999999999999999999999999544445555543        3467899999999  99999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhh
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY  162 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y  162 (266)
                      +||+||++|||||. ....++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||+++|..+..+  .++..+|
T Consensus        73 ~~G~iDiLVnnAG~-~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Ii~isS~~~~~~--~~~~~~Y  148 (248)
T d2d1ya1          73 ALGRVDVLVNNAAI-AAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFA--EQENAAY  148 (248)
T ss_dssp             HHSCCCEEEECCCC-CCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSB--CTTBHHH
T ss_pred             hcCCCCeEEEeCcC-CCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-ccccccccccccccc--ccccchh
Confidence            99999999999998 4567889999999999999999999999999999999887 799999999999887  6899999


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----cHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          163 GACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      +++|+|+++|+|++++|++++|||||+|+||+|+||+......    +++..+.+.+..|++|+++|+ |+|+.++||+|
T Consensus       149 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-dia~~v~fL~S  227 (248)
T d2d1ya1         149 NASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPE-EVAEAVLFLAS  227 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHH-HHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhC
Confidence            9999999999999999999999999999999999998765432    334556677889999999998 99999999999


Q ss_pred             CCCCcccccEEEEcCCcccc
Q 024517          239 DGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~~~  258 (266)
                      +.++|+|||+|.+|||++.+
T Consensus       228 ~~s~~itG~~i~vDGG~tas  247 (248)
T d2d1ya1         228 EKASFITGAILPVDGGMTAS  247 (248)
T ss_dssp             GGGTTCCSCEEEESTTGGGB
T ss_pred             chhcCCCCcEEEcCcCcccc
Confidence            99999999999999998753

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=7.3e-57  Score=369.93  Aligned_cols=244  Identities=21%  Similarity=0.313  Sum_probs=221.4

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +|+||++|||||++|||+++|++|+++|++|++++ +.+.++++.+++..    +.++.++.+|+++++  +++++++++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~--~v~~~~~~~   76 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT----PDQIQFFQHDSSDED--GWTKLFDAT   76 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC----TTTEEEEECCTTCHH--HHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC----CCcEEEEEccCCCHH--HHHHHHHHH
Confidence            48999999999999999999999999999999999 77777777777643    368999999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .++||+||++|||||. ....++.+.+.++|++++++|+.++++++|+++|+|++++.+++||++||..+..+  .++..
T Consensus        77 ~~~~G~iDiLVnnAg~-~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~--~~~~~  153 (251)
T d1zk4a1          77 EKAFGPVSTLVNNAGI-AVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG--DPSLG  153 (251)
T ss_dssp             HHHHSSCCEEEECCCC-CCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC--CTTCH
T ss_pred             HHHhCCceEEEecccc-ccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceecc--CCCch
Confidence            9999999999999998 56688999999999999999999999999999999998875579999999999877  68999


Q ss_pred             hhHHhHHHHHHHHHHHHHH--hCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          161 AYGACAASIHQLVRTAAME--IGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e--~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      .|+++|+|+.+|+|+++.|  ++++|||||+|+||+|+||+.......+ .........|++|+++|+ |+|+.++||+|
T Consensus       154 ~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~-~~~~~~~~~pl~R~~~pe-dvA~~v~fL~S  231 (251)
T d1zk4a1         154 AYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAE-EAMSQRTKTPMGHIGEPN-DIAYICVYLAS  231 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHH-HHHTSTTTCTTSSCBCHH-HHHHHHHHHHS
T ss_pred             hHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHH-HHHHHHhCCCCCCCcCHH-HHHHHHHHHhC
Confidence            9999999999999999998  6788999999999999999987765433 334455778999999998 99999999999


Q ss_pred             CCCCcccccEEEEcCCcc
Q 024517          239 DGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG~~  256 (266)
                      +.++|+|||+|.+|||++
T Consensus       232 ~~s~~itG~~i~vDGG~t  249 (251)
T d1zk4a1         232 NESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             GGGTTCCSCEEEESTTGG
T ss_pred             chhCCCcCcEEEECcccc
Confidence            999999999999999976

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=4.9e-57  Score=373.21  Aligned_cols=245  Identities=23%  Similarity=0.309  Sum_probs=214.3

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      |+||++|||||++|||+++|++|+++|++|++++ ++ +.++++.+++.+..  +.++.++.+|+++++  +++++++++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~--g~~~~~~~~Dv~~~~--~v~~~~~~~   77 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH--GVKVLYDGADLSKGE--AVRGLVDNA   77 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH--TSCEEEECCCTTSHH--HHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhc--CCcEEEEECCCCCHH--HHHHHHHHH
Confidence            6899999999999999999999999999999999 43 45667777776544  368999999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .++||+||++|||||. ....++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||++||.++..+  .++..
T Consensus        78 ~~~~G~iDiLVnnAG~-~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~--~~~~~  153 (260)
T d1x1ta1          78 VRQMGRIDILVNNAGI-QHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVA--SANKS  153 (260)
T ss_dssp             HHHHSCCSEEEECCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC--CTTCH
T ss_pred             HHHhCCCcEEEeeccc-ccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeecccccceec--cCCcc
Confidence            9999999999999998 5668899999999999999999999999999999999887 799999999999887  68999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----------cHHHHHHHhhccCCCCCCCChhhHH
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----------QERAVKLVREAAPLHRWLDVKNDLA  230 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~dva  230 (266)
                      +|+++|+|+++|+|+++.|++++|||||+|+||+|+||+......          ++...+.+.+..|++|+++|+ |+|
T Consensus       154 ~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe-diA  232 (260)
T d1x1ta1         154 AYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPE-QLG  232 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHH-HHH
T ss_pred             hhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHH-HHH
Confidence            999999999999999999999999999999999999999865432          122234466789999999998 999


Q ss_pred             HHHHHHccCCCCcccccEEEEcCCcc
Q 024517          231 STVIYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      +.++||+|+.++|+|||+|.+|||++
T Consensus       233 ~~v~fL~S~~a~~itG~~i~vDGG~t  258 (260)
T d1x1ta1         233 GTAVFLASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhChhhCCCcCCEEEECcchh
Confidence            99999999999999999999999976

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=1.1e-56  Score=370.93  Aligned_cols=244  Identities=26%  Similarity=0.405  Sum_probs=224.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +|+||++|||||++|||+++|++|+++|++|++++ +.++++++.+++.+.   +.++..+.||+++++  +++++++++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~---g~~~~~~~~Dv~~~~--~v~~~~~~~   76 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK---GVEARSYVCDVTSEE--AVIGTVDSV   76 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---TSCEEEEECCTTCHH--HHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEccCCCHH--HHHHHHHHH
Confidence            47999999999999999999999999999999999 778888888888764   468999999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .++||+||++|||||......++.+.+.++|++++++|+.++++++|+++|+|.+++ .|+||++||.++..+  .++..
T Consensus        77 ~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~--~~~~~  153 (260)
T d1zema1          77 VRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKG--PPNMA  153 (260)
T ss_dssp             HHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSC--CTTBH
T ss_pred             HHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-CCCCCeeechhhccC--CcchH
Confidence            999999999999999865667899999999999999999999999999999998877 799999999999887  68999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc--------------ccHHHHHHHhhccCCCCCCCCh
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV--------------GQERAVKLVREAAPLHRWLDVK  226 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~  226 (266)
                      +|+++|+|+++|+|+++.|++++|||||+|+||+|+|+++....              .++...+.+....|++|+++|+
T Consensus       154 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe  233 (260)
T d1zema1         154 AYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDIN  233 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHH
Confidence            99999999999999999999999999999999999999764321              1345556677889999999998


Q ss_pred             hhHHHHHHHHccCCCCcccccEEEEcCC
Q 024517          227 NDLASTVIYLISDGSRYMTGTTIYVDGA  254 (266)
Q Consensus       227 ~dva~~~~~l~s~~~~~~~G~~i~~dgG  254 (266)
                       |+|+.++||+|+.++|+|||+|.+|||
T Consensus       234 -dvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         234 -EIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             -GSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             -HHHHHHHHHhCchhcCccCCeEEeCCC
Confidence             999999999999999999999999998

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-57  Score=368.86  Aligned_cols=241  Identities=20%  Similarity=0.327  Sum_probs=216.0

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +|+||++|||||++|||+++|++|+++|++|++++ +++.++++.+++       .++.++.||++|++  +++++++++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~-------~~~~~~~~Dvs~~~--~v~~~~~~~   73 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL-------PGAVFILCDVTQED--DVKTLVSET   73 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-------TTEEEEECCTTSHH--HHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-------CCCeEEEccCCCHH--HHHHHHHHH
Confidence            57899999999999999999999999999999999 666666655553       46789999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .++||+||++|||||......++.+.+.++|++++++|+.++++++|+++|+|+++  +|+||++||..+..+  .++..
T Consensus        74 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~Ii~isS~~~~~~--~~~~~  149 (250)
T d1ydea1          74 IRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLVGAIG--QAQAV  149 (250)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHHHHHC--CTTCH
T ss_pred             HHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC--CCCCccccccccccc--ccCcc
Confidence            99999999999999975556678889999999999999999999999999999865  499999999999877  68999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----cHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      +|+++|+|+.+|+|+++.|++++|||||+|+||+|+||++.....    .+...+......|++|+++|+ |+|++++||
T Consensus       150 ~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~-eva~~v~fL  228 (250)
T d1ydea1         150 PYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPA-EVGAAAVFL  228 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHH-HHHHHHHHH
T ss_pred             hhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHH-HHHHHHHHH
Confidence            999999999999999999999999999999999999998765422    234445566778999999998 999999999


Q ss_pred             ccCCCCcccccEEEEcCCccc
Q 024517          237 ISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +|+ ++|+|||+|.+|||.++
T Consensus       229 ~Sd-a~~itG~~i~vDGG~~l  248 (250)
T d1ydea1         229 ASE-ANFCTGIELLVTGGAEL  248 (250)
T ss_dssp             HHH-CTTCCSCEEEESTTTTS
T ss_pred             hCc-cCCCcCCeEEECCCccc
Confidence            986 78999999999999886

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1.1e-56  Score=367.19  Aligned_cols=241  Identities=22%  Similarity=0.348  Sum_probs=220.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-c-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-N-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .+++|||||++|||+++|++|+++|++|++.+ + .+.++++.+++++.   +.++.++.+|+++++  +++++++++.+
T Consensus         1 spV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~---g~~~~~~~~Dv~~~~--~v~~~~~~~~~   75 (244)
T d1edoa_           1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY---GGQAITFGGDVSKEA--DVEAMMKTAID   75 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH---TCEEEEEECCTTSHH--HHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc---CCcEEEEeCCCCCHH--HHHHHHHHHHH
Confidence            36899999999999999999999999999976 4 45567777777654   468999999999999  99999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhh
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY  162 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y  162 (266)
                      +||+||++|||||. ....++.+.+.++|++++++|+.++++++|+++|+|++++ +|+||+|||.++..+  .++..+|
T Consensus        76 ~~g~iDiLVnnAg~-~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~--~~~~~~Y  151 (244)
T d1edoa_          76 AWGTIDVVVNNAGI-TRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIG--NIGQANY  151 (244)
T ss_dssp             HSSCCSEEEECCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHC--CTTCHHH
T ss_pred             HcCCCCcccccccc-ccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhcCC--CCCCHHH
Confidence            99999999999998 5668899999999999999999999999999999999877 799999999999887  6899999


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHc-cCCC
Q 024517          163 GACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI-SDGS  241 (266)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-s~~~  241 (266)
                      +++|+|+.+|+|+++.|++++|||||+|+||+|+||+....  .++..+...+..|++|+++|+ |+|+.+.||+ |+.+
T Consensus       152 ~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~R~~~p~-dvA~~v~fLa~S~~a  228 (244)
T d1edoa_         152 AAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL--GEDMEKKILGTIPLGRTGQPE-NVAGLVEFLALSPAA  228 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CHHHHHHHHTSCTTCSCBCHH-HHHHHHHHHHHCSGG
T ss_pred             HHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHh--hHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHHCCchh
Confidence            99999999999999999999999999999999999988664  455667778899999999998 9999999996 8899


Q ss_pred             CcccccEEEEcCCccc
Q 024517          242 RYMTGTTIYVDGAQSI  257 (266)
Q Consensus       242 ~~~~G~~i~~dgG~~~  257 (266)
                      +|+|||+|.+|||+++
T Consensus       229 ~~itG~~i~vdGG~si  244 (244)
T d1edoa_         229 SYITGQAFTIDGGIAI  244 (244)
T ss_dssp             GGCCSCEEEESTTTTC
T ss_pred             cCCcCCeEEeCCCeeC
Confidence            9999999999999875

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.2e-56  Score=370.29  Aligned_cols=242  Identities=21%  Similarity=0.289  Sum_probs=221.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ||++|||||++|||+++|++|+++|++|++++ +.++++++.+++.+.   +.++.++.+|+++++  +++++++++.++
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~---g~~~~~~~~Dvs~~~--~v~~~~~~~~~~   76 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA---GVEADGRTCDVRSVP--EIEALVAAVVER   76 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHH--HHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEeecCCHH--HHHHHHHHHHHH
Confidence            89999999999999999999999999999999 778889998888765   468999999999999  999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHH--HhccCCCCeEEEEecccccccCCCCCchh
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR--MKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      ||+||++|||||. ....++.+.+.++|++++++|+.++++++|+++|+  |.+++ .|+||+++|..+..+  .++..+
T Consensus        77 ~g~iDilVnnAG~-~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~-~g~Ii~i~S~~~~~~--~~~~~~  152 (257)
T d2rhca1          77 YGPVDVLVNNAGR-PGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQG--VVHAAP  152 (257)
T ss_dssp             TCSCSEEEECCCC-CCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT-EEEEEEECCGGGTSC--CTTCHH
T ss_pred             hCCCCEEEecccc-cCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC-Ccccccccccccccc--cccchh
Confidence            9999999999998 46678899999999999999999999999999997  44554 689999999999877  689999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc---------ccHHHHHHHhhccCCCCCCCChhhHHHH
Q 024517          162 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV---------GQERAVKLVREAAPLHRWLDVKNDLAST  232 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~  232 (266)
                      |+++|+|+.+|+|+++.|++++|||||+|+||+|+||+.....         ..++..+.+....|++|+++|+ |+|+.
T Consensus       153 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pe-dia~~  231 (257)
T d2rhca1         153 YSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPS-EVAEM  231 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHH-HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHH-HHHHH
Confidence            9999999999999999999999999999999999999875532         2355667778899999999998 99999


Q ss_pred             HHHHccCCCCcccccEEEEcCCcc
Q 024517          233 VIYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       233 ~~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      ++||+|+.++++|||+|.+|||.+
T Consensus       232 v~fL~S~~s~~itG~~i~vDGG~~  255 (257)
T d2rhca1         232 VAYLIGPGAAAVTAQALNVCGGLG  255 (257)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHhCchhcCCcCceEEECcCcc
Confidence            999999999999999999999975

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=1.8e-56  Score=368.63  Aligned_cols=244  Identities=25%  Similarity=0.335  Sum_probs=221.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      .|++|||||++|||+++|++|+++|++|++++ +.++++++.+++.+.   +.++.++.||+++++  +++++++++.++
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~---g~~~~~~~~Dv~~~~--~v~~~~~~~~~~   75 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA---GGHAVAVKVDVSDRD--QVFAAVEQARKT   75 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTSHH--HHHHHHHHHHHH
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEeeCCCHH--HHHHHHHHHHHH
Confidence            47899999999999999999999999999999 788888898888765   468999999999999  999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhH
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG  163 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~  163 (266)
                      ||+||++|||||+ ....++.+.+.++|++++++|+.++++++|+++|+|.++++++.|+++||..+..+  .++...|+
T Consensus        76 ~g~iDilVnnAG~-~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~--~~~~~~Y~  152 (255)
T d1gega_          76 LGGFDVIVNNAGV-APSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG--NPELAVYS  152 (255)
T ss_dssp             TTCCCEEEECCCC-CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC--CTTBHHHH
T ss_pred             hCCccEEEecccc-cccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhccc--Ccccccch
Confidence            9999999999998 56688999999999999999999999999999999887765789999999998877  68999999


Q ss_pred             HhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc---------HHHHHHHhhccCCCCCCCChhhHHHHHH
Q 024517          164 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ---------ERAVKLVREAAPLHRWLDVKNDLASTVI  234 (266)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (266)
                      ++|+|+++|+|+++.|++++|||||+|+||+|+||++......         ......+.+..|++|+++|+ |+|+.++
T Consensus       153 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-evA~~v~  231 (255)
T d1gega_         153 SSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPE-DVAACVS  231 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHH-HHHHHHH
T ss_pred             hCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHH-HHHHHHH
Confidence            9999999999999999999999999999999999987654321         22345567789999999998 9999999


Q ss_pred             HHccCCCCcccccEEEEcCCccc
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      ||+|+.++++|||.|.+|||..+
T Consensus       232 fL~S~~a~~itG~~i~vDGG~~~  254 (255)
T d1gega_         232 YLASPDSDYMTGQSLLIDGGMVF  254 (255)
T ss_dssp             HHHSGGGTTCCSCEEEESSSSSC
T ss_pred             HHhCchhCCccCcEEEecCCEEe
Confidence            99999999999999999999754

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.6e-56  Score=363.61  Aligned_cols=237  Identities=23%  Similarity=0.323  Sum_probs=217.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +|+||++|||||++|||+++|++|+++|++|++++ ++++++++.+++.      .++.++.+|+++++  +++++++++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~~~~--~v~~~~~~~   74 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA------DAARYVHLDVTQPA--QWKAAVDTA   74 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG------GGEEEEECCTTCHH--HHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh------CcceEEEeecCCHH--HHHHHHHHH
Confidence            58999999999999999999999999999999999 7777777776663      47889999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .++||++|++|||||. ....++.+.+.++|++++++|+.++++++|.++|+|.+++ +|+||++||..+..+  .++..
T Consensus        75 ~~~~g~idilinnAG~-~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~--~~~~~  150 (244)
T d1nffa_          75 VTAFGGLHVLVNNAGI-LNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAG--TVACH  150 (244)
T ss_dssp             HHHHSCCCEEEECCCC-CCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC--CTTBH
T ss_pred             HHHhCCCeEEEECCcc-cCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-cceEEeccccccccc--ccccc
Confidence            9999999999999998 5668899999999999999999999999999999999887 799999999999877  68999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|+|+++|+|+++.|++++|||||+|+||+|+||+......       ...+.|++|+++|+ |+|+.++||+|+.
T Consensus       151 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~-------~~~~~pl~R~~~p~-diA~~v~fL~s~~  222 (244)
T d1nffa_         151 GYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPE-------DIFQTALGRAAEPV-EVSNLVVYLASDE  222 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCT-------TCSCCSSSSCBCHH-HHHHHHHHHHSGG
T ss_pred             chhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhH-------HHHhccccCCCCHH-HHHHHHHHHhChh
Confidence            999999999999999999999999999999999999998755422       13468999999998 9999999999999


Q ss_pred             CCcccccEEEEcCCcccc
Q 024517          241 SRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~~  258 (266)
                      ++++|||+|.+|||.+..
T Consensus       223 s~~itG~~i~vDGG~~ag  240 (244)
T d1nffa_         223 SSYSTGAEFVVDGGTVAG  240 (244)
T ss_dssp             GTTCCSCEEEESTTGGGS
T ss_pred             hCCCcCCEEEECCCeecc
Confidence            999999999999998753

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=7.7e-57  Score=369.68  Aligned_cols=246  Identities=25%  Similarity=0.350  Sum_probs=220.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +|+||++|||||++|||+++|++|+++|++|++++ +.++++++.+++      +.++.++.+|+++++  +++++++++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~~~~--~v~~~~~~~   73 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL------GDAARYQHLDVTIEE--DWQRVVAYA   73 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT------GGGEEEEECCTTCHH--HHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------CCceEEEEcccCCHH--HHHHHHHHH
Confidence            68999999999999999999999999999999999 666666665554      357899999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .++||+||++|||||. ....++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||+|||.++..+  .++..
T Consensus        74 ~~~~g~iDilVnnAg~-~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~isS~~~~~~--~~~~~  149 (254)
T d1hdca_          74 REEFGSVDGLVNNAGI-STGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMG--LALTS  149 (254)
T ss_dssp             HHHHSCCCEEEECCCC-CCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC--CTTCH
T ss_pred             HHHcCCccEEEecCcc-ccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-CCeecccccchhccc--ccchh
Confidence            9999999999999998 5668899999999999999999999999999999999887 799999999999877  68999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCC-ChhhHHHHHHHHccC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLD-VKNDLASTVIYLISD  239 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~~~~l~s~  239 (266)
                      +|+++|+|+++|+|+++.|++++|||||+|+||+|+|+++.+...+  ..+......|++|+++ |+ |+|++++||+|+
T Consensus       150 ~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~--~~~~~~~~~pl~R~g~~Pe-dvA~~v~fL~S~  226 (254)
T d1hdca_         150 SYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIR--QGEGNYPNTPMGRVGNEPG-EIAGAVVKLLSD  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCC--CSTTSCTTSTTSSCB-CHH-HHHHHHHHHHSG
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHH--HHHHHHhCCCCCCCCCCHH-HHHHHHHHHhch
Confidence            9999999999999999999999999999999999999988654322  2344556789999985 65 999999999999


Q ss_pred             CCCcccccEEEEcCCccccCCCcc
Q 024517          240 GSRYMTGTTIYVDGAQSITRPRMR  263 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~~~~~~  263 (266)
                      .++|+|||+|.+|||++. .|.++
T Consensus       227 ~a~~itG~~i~vDGG~t~-gp~~~  249 (254)
T d1hdca_         227 TSSYVTGAELAVDGGWTT-GPTVK  249 (254)
T ss_dssp             GGTTCCSCEEEESTTTTT-SCCHH
T ss_pred             hhCCCCCceEEeCCCccC-CCCcc
Confidence            999999999999999875 56554

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.8e-56  Score=365.56  Aligned_cols=240  Identities=26%  Similarity=0.406  Sum_probs=217.1

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |+|+||++|||||++|||+++|++|+++|++|++++ +.++++++.+++       ..+..+.+|+++++  +++++++ 
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-------~~~~~~~~Dv~~~~--~v~~~~~-   70 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-------PGIEPVCVDLGDWD--ATEKALG-   70 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-------TTCEEEECCTTCHH--HHHHHHT-
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-------CCCeEEEEeCCCHH--HHHHHHH-
Confidence            899999999999999999999999999999999999 656666655553       36788999999988  8776654 


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                         ++|+||++|||||. ....++.+.+.++|++.+++|+.++++++|.++|.|.+++.+|+||+++|..+..+  .++.
T Consensus        71 ---~~g~iDilVnnAg~-~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~--~~~~  144 (242)
T d1cyda_          71 ---GIGPVDLLVNNAAL-VIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT--FPNL  144 (242)
T ss_dssp             ---TCCCCSEEEECCCC-CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC--CTTB
T ss_pred             ---HcCCCeEEEECCcc-ccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcccc--CCcc
Confidence               57999999999998 46678999999999999999999999999999998776654799999999988777  6899


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      .+|+++|+|+.+|+|+++.|++++|||||+|+||+|+||+......+++..+...+..|++|+++|+ |+|+.+.||+|+
T Consensus       145 ~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-eva~~v~fL~S~  223 (242)
T d1cyda_         145 ITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVE-DVVNSILFLLSD  223 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHH-HHHHHHHHHHSG
T ss_pred             ccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCc
Confidence            9999999999999999999999999999999999999999887776777888888999999999998 999999999999


Q ss_pred             CCCcccccEEEEcCCccc
Q 024517          240 GSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~  257 (266)
                      .++|+|||+|.+|||++-
T Consensus       224 ~s~~itG~~i~vDGG~~a  241 (242)
T d1cyda_         224 RSASTSGGGILVDAGYLA  241 (242)
T ss_dssp             GGTTCCSSEEEESTTGGG
T ss_pred             hhcCcCCceEEeCcchhc
Confidence            999999999999999763

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=2.7e-55  Score=364.30  Aligned_cols=252  Identities=24%  Similarity=0.349  Sum_probs=221.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +|+||++|||||++|||+++|++|+++|++|++++ +.++++++.+++...    ..+.++.||+++++  +++++++++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~----~~~~~~~~Dv~~~~--~v~~~~~~~   76 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP----DVISFVHCDVTKDE--DVRNLVDTT   76 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT----TTEEEEECCTTCHH--HHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC----CceEEEEccCCCHH--HHHHHHHHH
Confidence            58999999999999999999999999999999999 778888888887542    56888999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCC-CCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           81 CQILGNLDAFVHCYTYEGKM-QDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      .+.||++|++|||||..... ..+.+.+.++|++++++|+.++++++|+++|+|.+++ .|+||+++|..+..+. .+..
T Consensus        77 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii~iss~~~~~~~-~~~~  154 (268)
T d2bgka1          77 IAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAG-EGVS  154 (268)
T ss_dssp             HHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCC-TTSC
T ss_pred             HHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-CCCccccccccccccc-cccc
Confidence            99999999999999985433 2477889999999999999999999999999999877 7999999999887763 2445


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccH--HHHHH-HhhccCCCCCCCChhhHHHHHHHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE--RAVKL-VREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      ..|+++|+|+++|+|+++.|++++|||||+|+||+|+||+.......+  ..... .....|.+|+++|+ |+|+.++||
T Consensus       155 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pe-dvA~~v~fL  233 (268)
T d2bgka1         155 HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAE-DVADAVAYL  233 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHH-HHHHHHHHH
T ss_pred             cccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHH-HHHHHHHHH
Confidence            689999999999999999999999999999999999999987765422  22222 22346788999998 999999999


Q ss_pred             ccCCCCcccccEEEEcCCccccCCCc
Q 024517          237 ISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      +|+.++|+|||+|.+|||++.+.|.+
T Consensus       234 ~S~~s~~itGq~i~VDGG~t~~~p~~  259 (268)
T d2bgka1         234 AGDESKYVSGLNLVIDGGYTRTNPAF  259 (268)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGCCTHH
T ss_pred             hChhhCCccCceEEECcCcccCCCCC
Confidence            99999999999999999999998864

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=8.8e-56  Score=365.66  Aligned_cols=250  Identities=19%  Similarity=0.276  Sum_probs=225.1

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |+++||++|||||++|||+++|++|+++|++|++++ +.+++++..+++.+..  +.++.++.||+++++  ++++++++
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~--g~~~~~~~~Dv~~~~--~v~~~~~~   80 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF--GVKTKAYQCDVSNTD--IVTKTIQQ   80 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH--TCCEEEEECCTTCHH--HHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh--CCceEEEEccCCCHH--HHHHHHHH
Confidence            678999999999999999999999999999999999 7788888888876554  368999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-----
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-----  154 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-----  154 (266)
                      +.++||+||++|||||. ....++.+.+.++|++.+++|+.++++++|.++|+|.+++.++.|++++|.......     
T Consensus        81 ~~~~~g~iDilVnnAg~-~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~  159 (260)
T d1h5qa_          81 IDADLGPISGLIANAGV-SVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLN  159 (260)
T ss_dssp             HHHHSCSEEEEEECCCC-CCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETT
T ss_pred             HHHHhCCCcEecccccc-cccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccc
Confidence            99999999999999998 566889999999999999999999999999999999766657888888887654321     


Q ss_pred             CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHH
Q 024517          155 LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI  234 (266)
Q Consensus       155 ~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (266)
                      ..++...|+++|+|+.+|+|+++.|++++|||||+|+||+|+|++....  .++..+...+..|++|+++|+ |+|+.++
T Consensus       160 ~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~R~g~pe-dvA~~v~  236 (260)
T d1h5qa_         160 GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPE-EMTGQAI  236 (260)
T ss_dssp             EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCGG-GGHHHHH
T ss_pred             cCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhcc--CHHHHHHHHhcCCCCCCcCHH-HHHHHHH
Confidence            1257789999999999999999999999999999999999999998764  456677788899999999998 9999999


Q ss_pred             HHccCCCCcccccEEEEcCCcccc
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      ||+|+.++|+|||+|.+|||++++
T Consensus       237 fL~S~~s~~itG~~i~VDGG~~~~  260 (260)
T d1h5qa_         237 LLLSDHATYMTGGEYFIDGGQLIW  260 (260)
T ss_dssp             HHHSGGGTTCCSCEEEECTTGGGC
T ss_pred             HHhcchhCCCcCceEEECCCeecC
Confidence            999999999999999999999874

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=7.7e-56  Score=360.49  Aligned_cols=233  Identities=23%  Similarity=0.310  Sum_probs=207.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++||++|||||++|||+++|++|+++|++|++++ +.+..              .++..+.+|+++++  +++++++++
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--------------~~~~~~~~Dv~~~~--~v~~~~~~~   67 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP--------------KGLFGVEVDVTDSD--AVDRAFTAV   67 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC--------------TTSEEEECCTTCHH--HHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh--------------cCceEEEEecCCHH--HHHHHHHHH
Confidence            68999999999999999999999999999999999 43322              46678999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .++||+||++|||||. ....++.+.+.++|++++++|+.++++++|.++|+|.+++ .|+||+|||.++..+  .++..
T Consensus        68 ~~~~g~iDiLVnnAG~-~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~~~--~~~~~  143 (237)
T d1uzma1          68 EEHQGPVEVLVSNAGL-SADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWG--IGNQA  143 (237)
T ss_dssp             HHHHSSCSEEEEECSC-CC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-------CCH
T ss_pred             HHhcCCceEEEeeecc-cccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhccC--CcccH
Confidence            9999999999999998 4667899999999999999999999999999999999887 799999999999877  68999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      +|+++|+|+++|+|+++.|++++|||||+|+||+|+|++....  ++...+...+..|++|+++|+ |+|+.+.||+|+.
T Consensus       144 ~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pe-dvA~~v~fL~S~~  220 (237)
T d1uzma1         144 NYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPA-EVAGVVSFLASED  220 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS--CHHHHHHHGGGCTTCSCBCHH-HHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc--CHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCch
Confidence            9999999999999999999999999999999999999987664  455667778899999999998 9999999999999


Q ss_pred             CCcccccEEEEcCCccc
Q 024517          241 SRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~  257 (266)
                      ++|+|||+|.+|||.++
T Consensus       221 s~~itG~~i~vdGG~~m  237 (237)
T d1uzma1         221 ASYISGAVIPVDGGMGM  237 (237)
T ss_dssp             GTTCCSCEEEESTTTTC
T ss_pred             hcCCcCCeEEECCCCCC
Confidence            99999999999999764

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-56  Score=362.49  Aligned_cols=239  Identities=24%  Similarity=0.364  Sum_probs=215.1

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |+|+||++|||||++|||+++|++|+++|++|++++ +.++++++.+++       ..+..+.+|++|++  +++++++ 
T Consensus         3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~-------~~~~~~~~Dv~d~~--~v~~~~~-   72 (244)
T d1pr9a_           3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC-------PGIEPVCVDLGDWE--ATERALG-   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-------TTCEEEECCTTCHH--HHHHHHT-
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc-------CCCeEEEEeCCCHH--HHHHHHH-
Confidence            456999999999999999999999999999999999 666666666554       35788999999988  8776664 


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                         ++|+||++|||||. ....++.+.+.++|++.+++|+.++++++|.++|.|.+++..|+||++||..+..+  .++.
T Consensus        73 ---~~g~iDilVnnAg~-~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~--~~~~  146 (244)
T d1pr9a_          73 ---SVGPVDLLVNNAAV-ALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA--VTNH  146 (244)
T ss_dssp             ---TCCCCCEEEECCCC-CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC--CTTB
T ss_pred             ---HhCCceEEEecccc-ccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccc--ccch
Confidence               57999999999998 56678999999999999999999999999999998765544799999999999877  6899


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      ..|+++|+|+++|+|+++.|++++|||||+|+||+|+|++......+.+..+...+..|++|+++|+ |+|+.+.||+|+
T Consensus       147 ~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-evA~~v~fL~S~  225 (244)
T d1pr9a_         147 SVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVE-HVVNAILFLLSD  225 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHH-HHHHHHHHHHSG
T ss_pred             hhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCc
Confidence            9999999999999999999999999999999999999999877666667777788899999999998 999999999999


Q ss_pred             CCCcccccEEEEcCCcc
Q 024517          240 GSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~  256 (266)
                      .++|+|||+|.+|||++
T Consensus       226 ~a~~itG~~i~vDGG~~  242 (244)
T d1pr9a_         226 RSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             GGTTCCSCEEEESTTGG
T ss_pred             hhCCcCCcEEEECccHh
Confidence            99999999999999986

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=1.3e-54  Score=357.76  Aligned_cols=248  Identities=24%  Similarity=0.354  Sum_probs=222.1

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++|+||++|||||++|||+++|++|+++|++|++++ +.++++++.+++.+.   +.++.++.||+++.+  ++++++++
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~---~~~~~~~~~D~s~~~--~~~~~~~~   76 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK---GLNVEGSVCDLLSRT--ERDKLMQT   76 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHH--HHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCCceEEEeecCCHH--HHHHHHHH
Confidence            478999999999999999999999999999999999 777888888888665   468889999999999  99999999


Q ss_pred             HHHHh-CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           80 ACQIL-GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        80 ~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      +.+.+ +.+|++|||||. ....++.+.+.++|++++++|+.+++.+.++++|+|.+++ .|+||++||.++..+  .++
T Consensus        77 ~~~~~~g~idilinnag~-~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-~g~ii~isS~~~~~~--~~~  152 (258)
T d1ae1a_          77 VAHVFDGKLNILVNNAGV-VIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSA--LPS  152 (258)
T ss_dssp             HHHHTTSCCCEEEECCCC-CCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSC--CTT
T ss_pred             HHHHhCCCcEEEeccccc-cccCccccCCHHHHhhhhhhcccccccccccccccccccc-ccccccccccccccc--ccc
Confidence            99998 679999999998 4667899999999999999999999999999999999887 899999999999877  689


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----cHHHHHHHhhccCCCCCCCChhhHHHHHH
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKLVREAAPLHRWLDVKNDLASTVI  234 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (266)
                      ...|+++|+|+++|+|.+++|++++|||||+|+||+|+||+......    ..+..+.+....|++|+++|+ |+|++++
T Consensus       153 ~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pe-diA~~v~  231 (258)
T d1ae1a_         153 VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQ-EVSALIA  231 (258)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHH-HHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHH-HHHHHHH
Confidence            99999999999999999999999999999999999999998766543    345667778899999999998 9999999


Q ss_pred             HHccCCCCcccccEEEEcCCcccc
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      ||+|+.++++|||.|.+|||++..
T Consensus       232 fL~S~~s~~itG~~i~vDGG~s~~  255 (258)
T d1ae1a_         232 FLCFPAASYITGQIIWADGGFTAN  255 (258)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHhChhhCCCcCcEEEeCCCeecc
Confidence            999999999999999999999864

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.5e-55  Score=365.16  Aligned_cols=253  Identities=21%  Similarity=0.300  Sum_probs=226.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccC--CCCCeEEEEEecCCCchHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLK--GGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      .|+||++|||||++|||+++|++|+++|++|++++ +.+++++..+++.+...  .+.++..+.||+++++  +++++++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~--~v~~~~~   86 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEE--EVNNLVK   86 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHH--HHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHH--HHHHHHH
Confidence            37999999999999999999999999999999999 77888999988876543  2468999999999999  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++.+.||+||++|||||. ....++.+.+.++|++++++|+.++++++|+++|.|.+++ .+.||++|+. +..+  .++
T Consensus        87 ~~~~~~G~iDiLVnnAg~-~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss~-~~~~--~~~  161 (297)
T d1yxma1          87 STLDTFGKINFLVNNGGG-QFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVP-TKAG--FPL  161 (297)
T ss_dssp             HHHHHHSCCCEEEECCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCC-CTTC--CTT
T ss_pred             HHHHHhCCeEEEEeeccc-cccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-cccccccccc-cccc--ccc
Confidence            999999999999999998 5678899999999999999999999999999999998887 7889888764 3333  689


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--cHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      ...|+++|+|+++|+|+++.|++++|||||+|+||+|+|++......  .++..+......|++|+++|+ |+|+.++||
T Consensus       162 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pe-dvA~~v~fL  240 (297)
T d1yxma1         162 AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPE-EVSSVVCFL  240 (297)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTH-HHHHHHHHH
T ss_pred             cccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHH
Confidence            99999999999999999999999999999999999999998765443  234455667789999999998 999999999


Q ss_pred             ccCCCCcccccEEEEcCCccccCCCc
Q 024517          237 ISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                      +|+.++|+|||+|.+|||+++....+
T Consensus       241 ~Sd~s~~iTG~~i~VDGG~sl~~~~~  266 (297)
T d1yxma1         241 LSPAASFITGQSVDVDGGRSLYTHSY  266 (297)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGCBTTC
T ss_pred             hCchhcCcCCcEEEeCcChhhhcCCC
Confidence            99999999999999999999875543

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=6.1e-55  Score=361.38  Aligned_cols=249  Identities=22%  Similarity=0.317  Sum_probs=209.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      .|+||++|||||++|||+++|++|+++|++|++++ +.++++++.+++.+......++.++.+|+++++  +++++++++
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~--~v~~~~~~~   79 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDA--GQDEILSTT   79 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHH--HHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHH--HHHHHHHHH
Confidence            47999999999999999999999999999999999 778889999988765333357999999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCC---CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc-cccCCC
Q 024517           81 CQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG-AERGLY  156 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~-~~~~~~  156 (266)
                      .++||+||++|||||...+   ..++.+.+.++|++.+++|+.++++++|+++|+|++++  |.+|+++|..+ ..+  .
T Consensus        80 ~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~--g~iI~~~S~~~~~~~--~  155 (264)
T d1spxa_          80 LGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHA--T  155 (264)
T ss_dssp             HHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSSC--C
T ss_pred             HHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc--Ccceeeeeecccccc--C
Confidence            9999999999999997432   23456678999999999999999999999999998765  67777777654 444  6


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc-------HHHHHHHhhccCCCCCCCChhhH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ-------ERAVKLVREAAPLHRWLDVKNDL  229 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~dv  229 (266)
                      ++...|+++|+|+++|+|+++.|++++|||||+|+||+|+|++......+       ......+.+..|++|+++|+ |+
T Consensus       156 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe-dv  234 (264)
T d1spxa_         156 PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQ-DI  234 (264)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHH-HH
T ss_pred             CCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHH-HH
Confidence            88999999999999999999999999999999999999999987654322       22334566789999999998 99


Q ss_pred             HHHHHHHccCC-CCcccccEEEEcCCccc
Q 024517          230 ASTVIYLISDG-SRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       230 a~~~~~l~s~~-~~~~~G~~i~~dgG~~~  257 (266)
                      |++++||+|++ ++|+|||.|.+|||+++
T Consensus       235 A~~v~fL~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         235 AEVIAFLADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             HHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHhCCcccCCccCceEEeCCChhh
Confidence            99999999954 78999999999999986

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=9.6e-55  Score=361.81  Aligned_cols=253  Identities=20%  Similarity=0.311  Sum_probs=220.7

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      .|+||++|||||++|||+++|++|+++|++|++++ +.++++++.+++.+....+.++.++.+|+++++  +++++++++
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~--~v~~~~~~~   78 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEAS--GQDDIINTT   78 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHH--HHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHH--HHHHHHHHH
Confidence            47899999999999999999999999999999999 778889999888765433457899999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCC-CCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           81 CQILGNLDAFVHCYTYEGKM-QDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      .++||+||++|||||..... .+..+.+.++|++.+++|+.++++++|+++|+|++++ ++.|+++||.++..+  .++.
T Consensus        79 ~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~ii~~ss~~~~~~--~~~~  155 (274)
T d1xhla_          79 LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA--HSGY  155 (274)
T ss_dssp             HHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC--CTTS
T ss_pred             HHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc-cccccchhhhhcccc--CCCC
Confidence            99999999999999974332 2445678899999999999999999999999998876 788888888887666  6889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccH-------HHHHHHhhccCCCCCCCChhhHHHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE-------RAVKLVREAAPLHRWLDVKNDLAST  232 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~dva~~  232 (266)
                      ..|+++|+|+.+|+|+++.|++++|||||+|+||+|+||+.......+       +......+..|++|+++|+ |+|+.
T Consensus       156 ~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pe-diA~~  234 (274)
T d1xhla_         156 PYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPE-EIANI  234 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHH-HHHHH
T ss_pred             ceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHH-HHHHH
Confidence            999999999999999999999999999999999999999876543222       1223334668999999998 99999


Q ss_pred             HHHHccC-CCCcccccEEEEcCCccccCC
Q 024517          233 VIYLISD-GSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       233 ~~~l~s~-~~~~~~G~~i~~dgG~~~~~~  260 (266)
                      ++||+|+ .++|+|||+|.+|||+++...
T Consensus       235 v~fL~S~d~s~~itG~~i~vDGG~~l~~g  263 (274)
T d1xhla_         235 IVFLADRNLSSYIIGQSIVADGGSTLVMG  263 (274)
T ss_dssp             HHHHHCHHHHTTCCSCEEEESTTGGGCCG
T ss_pred             HHHHcCCccccCccCcEEEeCcCHHHhcC
Confidence            9999995 689999999999999998754

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1e-54  Score=361.35  Aligned_cols=250  Identities=22%  Similarity=0.334  Sum_probs=215.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      .|+||++|||||++|||+++|++|+++|++|++++ +.++++++.+++.+....+.++.++.||+++++  +++++++++
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~--~v~~~~~~~   79 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTED--GQDQIINST   79 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHH--HHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHH--HHHHHHHHH
Confidence            47899999999999999999999999999999999 788889999998765333457999999999999  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCC---CCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEec-ccccccCCC
Q 024517           81 CQILGNLDAFVHCYTYEGKM---QDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTS-IIGAERGLY  156 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss-~~~~~~~~~  156 (266)
                      .++||+||++|||||...+.   ....+.+.++|++++++|+.+++.++|+++|+|++++  |.+|+++| .++..+  .
T Consensus        80 ~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~--g~iI~~~Ss~a~~~~--~  155 (272)
T d1xkqa_          80 LKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVNVSSIVAGPQA--Q  155 (272)
T ss_dssp             HHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGSSSC--C
T ss_pred             HHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC--CccccccchhccccC--C
Confidence            99999999999999984331   2234677889999999999999999999999998765  55666655 455555  6


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHH-------HHHHHhhccCCCCCCCChhhH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQER-------AVKLVREAAPLHRWLDVKNDL  229 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~dv  229 (266)
                      ++...|+++|+|+++|+|+++.|++++|||||+|+||+|+||+.......+.       .........|++|+++|+ |+
T Consensus       156 ~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe-di  234 (272)
T d1xkqa_         156 PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPE-HI  234 (272)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHH-HH
T ss_pred             CCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHH-HH
Confidence            8999999999999999999999999999999999999999998766543322       223445678999999998 99


Q ss_pred             HHHHHHHccCC-CCcccccEEEEcCCcccc
Q 024517          230 ASTVIYLISDG-SRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       230 a~~~~~l~s~~-~~~~~G~~i~~dgG~~~~  258 (266)
                      |++++||+|++ +.|+|||+|.+|||.++.
T Consensus       235 A~~v~fL~S~~as~~iTG~~i~vDGG~~l~  264 (272)
T d1xkqa_         235 ANIILFLADRNLSFYILGQSIVADGGTSLV  264 (272)
T ss_dssp             HHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHhCcchhCCccCeEEEeCcCHHHh
Confidence            99999999965 579999999999999885

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=5.2e-55  Score=359.08  Aligned_cols=242  Identities=23%  Similarity=0.241  Sum_probs=214.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +|+||++|||||++|||+++|++|+++|++|++++ +.++++++.+++      +.+..++.+|+++.+  +++++++++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~--~~~~~~~~~   74 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL------GERSMFVRHDVSSEA--DWTLVMAAV   74 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH------CTTEEEECCCTTCHH--HHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------CCCeEEEEeecCCHH--HHHHHHHHH
Confidence            58999999999999999999999999999999999 777777777776      357889999999988  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .++||++|++|||||.. ...++.+.+.++|++++++|+.++++++|+++|+|+++  +|+||+|||..+..+  .++..
T Consensus        75 ~~~~g~iDilVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~--~G~Iv~isS~~~~~~--~~~~~  149 (253)
T d1hxha_          75 QRRLGTLNVLVNNAGIL-LPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET--GGSIINMASVSSWLP--IEQYA  149 (253)
T ss_dssp             HHHHCSCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--CEEEEEECCGGGTSC--CTTBH
T ss_pred             HHHhCCCCeEEeccccc-CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc--CCceecccchhhhcC--ccccc
Confidence            99999999999999984 55788999999999999999999999999999999764  599999999999877  68999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCC--CcEEEEEecCcccCCCccccccc---HHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          161 AYGACAASIHQLVRTAAMEIGKH--KIRVNGIARGLHLQDEYPIAVGQ---ERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~--~i~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      +|+++|+|+.+|+|+++.|++++  |||||+|+||+|+||++.....+   ++.........|++|+++|+ |+|+.++|
T Consensus       150 ~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pe-dvA~~v~f  228 (253)
T d1hxha_         150 GYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPE-RIAQLVLF  228 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHH-HHHHHHHH
T ss_pred             cccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHH-HHHHHHHH
Confidence            99999999999999999999874  59999999999999987654432   23333334456778888888 99999999


Q ss_pred             HccCCCCcccccEEEEcCCccc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      |+|+.++|+|||+|.+|||+.-
T Consensus       229 L~S~~s~~itG~~i~VDGG~~~  250 (253)
T d1hxha_         229 LASDESSVMSGSELHADNSILG  250 (253)
T ss_dssp             HHSGGGTTCCSCEEEESSSCTT
T ss_pred             HhChhhCCCcCcEEEECccHhh
Confidence            9999999999999999999754

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3.3e-54  Score=355.76  Aligned_cols=247  Identities=21%  Similarity=0.296  Sum_probs=213.7

Q ss_pred             CCCCCcEEEEecCCC--chHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGD--EISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~--giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      ++|+||++|||||++  |||+++|++|+++|++|+++++.++..+..+++...   +.+..++.+|+++++  +++++++
T Consensus         4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~--~v~~~~~   78 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEA---LGGALLFRADVTQDE--ELDALFA   78 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH---TTCCEEEECCTTCHH--HHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhc---cCcccccccccCCHH--HHHHHHH
Confidence            468999999999986  999999999999999999998666666666555444   356788999999999  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCC---CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC
Q 024517           79 KACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL  155 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~  155 (266)
                      ++.++||+||++|||||....   ..++.+.+.++|+..+++|+.+++.++|.+.|+|++   +|+||++||..+..+  
T Consensus        79 ~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~G~Iv~isS~~~~~~--  153 (256)
T d1ulua_          79 GVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGIVTLTYYASEKV--  153 (256)
T ss_dssp             HHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEEECGGGTSB--
T ss_pred             HHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc---CCEEEEEeehHhcCC--
Confidence            999999999999999997432   245678889999999999999999999999999875   589999999999877  


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      .+++.+|+++|+|+++|+|+++.|++++|||||+|+||+|+|++.......++..+...+..|++|+++|+ |+|+++.|
T Consensus       154 ~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-dvA~~v~f  232 (256)
T d1ulua_         154 VPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQE-EVGNLGLF  232 (256)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHH-HHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHH-HHHHHHHH
Confidence            68999999999999999999999999999999999999999999887766677778888899999999998 99999999


Q ss_pred             HccCCCCcccccEEEEcCCcccc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      |+|+.++++|||+|.+|||++++
T Consensus       233 L~S~~s~~itG~~i~VDGG~~~~  255 (256)
T d1ulua_         233 LLSPLASGITGEVVYVDAGYHIM  255 (256)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HhCchhCCccCCeEEECcCEeCc
Confidence            99999999999999999999986

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=7.5e-54  Score=356.74  Aligned_cols=243  Identities=19%  Similarity=0.286  Sum_probs=212.6

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |+|+||++|||||++|||+++|++|+++|++|++++ +.++++++.+++      +.++..+.+|+++.+  ++++++++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~------~~~~~~~~~Dv~~~~--~~~~~~~~   72 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH------GDNVLGIVGDVRSLE--DQKQAASR   72 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------GGGEEEEECCTTCHH--HHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc------CCCeeEEecccccHH--HHHHHHHH
Confidence            999999999999999999999999999999999999 666666666554      358899999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCC----CCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQD----PLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL  155 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~  155 (266)
                      +.++||++|++|||||.......    ..+.+.++|++++++|+.++++++|+++|+|++++  |.||+++|..+..+  
T Consensus        73 ~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--g~iI~i~S~~~~~~--  148 (276)
T d1bdba_          73 CVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR--GNVIFTISNAGFYP--  148 (276)
T ss_dssp             HHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTST--
T ss_pred             HHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC--CCceeeeechhccC--
Confidence            99999999999999997543332    23455678999999999999999999999998764  89999999988877  


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--------cHHHHHHHhhccCCCCCCCChh
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--------QERAVKLVREAAPLHRWLDVKN  227 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~  227 (266)
                      .++...|+++|+|+.+|+|+++.|+++ +||||+|+||+|+|++......        .++..+.+.+..|++|+++|+ 
T Consensus       149 ~~~~~~Y~asKaal~~ltr~lA~ela~-~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe-  226 (276)
T d1bdba_         149 NGGGPLYTAAKHAIVGLVRELAFELAP-YVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVE-  226 (276)
T ss_dssp             TSSCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGG-
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhhc-ceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHH-
Confidence            689999999999999999999999997 4999999999999998754321        233456677889999999998 


Q ss_pred             hHHHHHHHHccC-CCCcccccEEEEcCCccc
Q 024517          228 DLASTVIYLISD-GSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       228 dva~~~~~l~s~-~~~~~~G~~i~~dgG~~~  257 (266)
                      |+|+.++||+|+ .++|+|||+|.+|||.++
T Consensus       227 eva~~v~fL~S~~~a~~itG~~i~VDGG~~~  257 (276)
T d1bdba_         227 EYTGAYVFFATRGDAAPATGALLNYDGGLGV  257 (276)
T ss_dssp             GGSHHHHHHHCHHHHTTCSSCEEEESSSGGG
T ss_pred             HHHHHHHHHcCCcccCCeeCcEEEECcChhh
Confidence            999999999984 689999999999999886

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=1.8e-53  Score=350.06  Aligned_cols=238  Identities=19%  Similarity=0.277  Sum_probs=212.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      ++|||||++|||+++|++|+++|++|++++ +.+.++++..... .        +..+|+++.+  +++++++++.++||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~-~--------~~~~dv~~~~--~~~~~~~~~~~~~G   70 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE-T--------YPQLKPMSEQ--EPAELIEAVTSAYG   70 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH-H--------CTTSEECCCC--SHHHHHHHHHHHHS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhC-c--------EEEeccCCHH--HHHHHHHHHHHHcC
Confidence            799999999999999999999999999999 6666665543322 2        2348999999  99999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhHHh
Q 024517           86 NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGAC  165 (266)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~s  165 (266)
                      +||++|||||+.....++.+.+.++|++.+++|+.++++++|+++|+|++++ .|+||++||..+..+  .++..+|+++
T Consensus        71 ~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~~--~~~~~~Y~as  147 (252)
T d1zmta1          71 QVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGP--WKELSTYTSA  147 (252)
T ss_dssp             CCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSC--CTTCHHHHHH
T ss_pred             CCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeecccccccccc--cccccccccc
Confidence            9999999999855667899999999999999999999999999999999887 799999999998776  6889999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc------cHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          166 AASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG------QERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       166 K~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      |+|+++|+|+++.|++++|||||+|+||+|+|++......      .++..+...+..|++|+++|+ |+|++++||+|+
T Consensus       148 Kaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pe-dvA~~v~fL~S~  226 (252)
T d1zmta1         148 RAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQK-ELGELVAFLASG  226 (252)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHH-HHHHHHHHHHTT
T ss_pred             cccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCc
Confidence            9999999999999999999999999999999998766532      344566778899999999998 999999999999


Q ss_pred             CCCcccccEEEEcCCccccC
Q 024517          240 GSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~~  259 (266)
                      .++|+|||+|.+|||+++..
T Consensus       227 ~s~~iTG~~i~vdGG~~~~~  246 (252)
T d1zmta1         227 SCDYLTGQVFWLAGGFPMIE  246 (252)
T ss_dssp             SCGGGTTCEEEESTTCCCCC
T ss_pred             hhcCCcCCeEEECCCceeCC
Confidence            99999999999999998754

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=1.7e-53  Score=347.68  Aligned_cols=238  Identities=26%  Similarity=0.383  Sum_probs=207.4

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      .|+||++|||||++|||+++|++|+++|++|++++ +.+++++..+++      +.++.++++|+++++  +++++++++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dls~~~--~i~~~~~~i   73 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL------EAEAIAVVADVSDPK--AVEAVFAEA   73 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC------CSSEEEEECCTTSHH--HHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc------CCceEEEEecCCCHH--HHHHHHHHH
Confidence            57999999999999999999999999999999999 555554444333      368899999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.||++|++|||||. ....++.+.+.++|++++++|+.+++.++|.+.|+|.+   ++.++++||.+. .+  .+++.
T Consensus        74 ~~~~g~iDiLinnAg~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~---~~~i~~~ss~a~-~~--~~~~~  146 (241)
T d2a4ka1          74 LEEFGRLHGVAHFAGV-AHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE---GGSLVLTGSVAG-LG--AFGLA  146 (241)
T ss_dssp             HHHHSCCCEEEEGGGG-TTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT---TCEEEEECCCTT-CC--HHHHH
T ss_pred             HHHhCCccEecccccc-ccccchhhhhcccccccccccccccccccccccccccc---ccceeecccccc-cc--ccCcc
Confidence            9999999999999998 56788999999999999999999999999999999875   356666665543 33  37899


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|+++|+|+++|+|++++|++++|||||+|+||+|+|++....  +++..+.+.+..|++|+++|+ |+|++++||+|+.
T Consensus       147 ~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~p~-dva~~v~fL~S~~  223 (241)
T d2a4ka1         147 HYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPE-EVAQAALFLLSEE  223 (241)
T ss_dssp             HHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS--CHHHHHHHHHTSTTCSCBCHH-HHHHHHHHHHSGG
T ss_pred             ccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhh--hHhHHHHHHhCCCCCCCcCHH-HHHHHHHHHhcch
Confidence            9999999999999999999999999999999999999987654  355667777889999999998 9999999999999


Q ss_pred             CCcccccEEEEcCCccc
Q 024517          241 SRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       241 ~~~~~G~~i~~dgG~~~  257 (266)
                      ++++|||+|.+|||+++
T Consensus       224 s~~itG~~i~vDGG~s~  240 (241)
T d2a4ka1         224 SAYITGQALYVDGGRSI  240 (241)
T ss_dssp             GTTCCSCEEEESTTTTT
T ss_pred             hCCCcCceEEeCCCccc
Confidence            99999999999999986

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.8e-52  Score=345.58  Aligned_cols=242  Identities=24%  Similarity=0.335  Sum_probs=216.2

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cc-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      |.||++|||||++|||+++|++|+++|++|++++ +. +..+++.+++.+.   +.++.++.||+++++  +++++++++
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~---g~~~~~~~~D~~~~~--~v~~~~~~~   78 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL---GAQGVAIQADISKPS--EVVALFDKA   78 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTSHH--HHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc---CCCceEecCCCCCHH--HHHHHHHHH
Confidence            7899999999999999999999999999999876 44 4467777777654   568999999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+++|+||++|||||. ....++.+.+.++|++.+++|+.++++++|.++|+|++   .+.+++++|..+...+ .+++.
T Consensus        79 ~~~~g~idilinnag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~g~~iii~s~~~~~~~-~~~~~  153 (259)
T d1ja9a_          79 VSHFGGLDFVMSNSGM-EVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR---GGRIILTSSIAAVMTG-IPNHA  153 (259)
T ss_dssp             HHHHSCEEEEECCCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE---EEEEEEECCGGGTCCS-CCSCH
T ss_pred             HHHcCCCcEEEecccc-ccccccccchHHHHHHHHhhccceeeeehhhhhhhhhc---CCcccccccccccccC-CCCch
Confidence            9999999999999998 56788889999999999999999999999999999976   4688888887776543 68999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc-----------ccHHHHHHHhhccCCCCCCCChhhH
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV-----------GQERAVKLVREAAPLHRWLDVKNDL  229 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~dv  229 (266)
                      .|+++|+|+++|+|++++|++++|||||+|+||+|+||+.....           .+++..+......|++|+++|+ |+
T Consensus       154 ~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~-eV  232 (259)
T d1ja9a_         154 LYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPA-DI  232 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHH-HH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHH-HH
Confidence            99999999999999999999999999999999999999764321           2355667778899999999998 99


Q ss_pred             HHHHHHHccCCCCcccccEEEEcCCc
Q 024517          230 ASTVIYLISDGSRYMTGTTIYVDGAQ  255 (266)
Q Consensus       230 a~~~~~l~s~~~~~~~G~~i~~dgG~  255 (266)
                      |++++||+|+.++++|||+|.+|||.
T Consensus       233 a~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         233 GRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHhCchhcCCcCceEEeCCCC
Confidence            99999999999999999999999995

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=5e-52  Score=337.84  Aligned_cols=231  Identities=22%  Similarity=0.272  Sum_probs=203.0

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      |+||++|||||++|||+++|++|+++|++|+++++.+   +..++        ....++.||+++.        ++.+.+
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~---~~l~~--------~~~~~~~~Dv~~~--------~~~~~~   62 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE---ELLKR--------SGHRYVVCDLRKD--------LDLLFE   62 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH---HHHHH--------TCSEEEECCTTTC--------HHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH---HHHHh--------cCCcEEEcchHHH--------HHHHHH
Confidence            6899999999999999999999999999999999432   22222        2345778999863        334556


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhh
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY  162 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y  162 (266)
                      ++++||++|||||. ....++.+.+.++|++.+++|+.+++.++|+++|+|++++ .|+||+++|..+..+  .++...|
T Consensus        63 ~~g~iD~lVnnAG~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~~~--~~~~~~Y  138 (234)
T d1o5ia_          63 KVKEVDILVLNAGG-PKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISP--IENLYTS  138 (234)
T ss_dssp             HSCCCSEEEECCCC-CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC--CTTBHHH
T ss_pred             HhCCCcEEEecccc-cCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-ccccccccccccccc--ccccccc
Confidence            78999999999998 5667888999999999999999999999999999999877 799999999988776  6899999


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCC
Q 024517          163 GACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR  242 (266)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  242 (266)
                      +++|+|+++|+|++++|++++|||||+|+||+++|++..... .+...+...+..|++|+++|+ |+|+.++||+|+.++
T Consensus       139 ~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~-~~~~~~~~~~~~pl~R~~~pe-diA~~v~fL~S~~s~  216 (234)
T d1o5ia_         139 NSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL-SEEKKKQVESQIPMRRMAKPE-EIASVVAFLCSEKAS  216 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS-CHHHHHHHHTTSTTSSCBCHH-HHHHHHHHHHSGGGT
T ss_pred             hhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhc-CHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhChhhc
Confidence            999999999999999999999999999999999999987654 344556777899999999998 999999999999999


Q ss_pred             cccccEEEEcCCcccc
Q 024517          243 YMTGTTIYVDGAQSIT  258 (266)
Q Consensus       243 ~~~G~~i~~dgG~~~~  258 (266)
                      |+|||+|.+|||++.+
T Consensus       217 ~itG~~i~vDGG~s~~  232 (234)
T d1o5ia_         217 YLTGQTIVVDGGLSKF  232 (234)
T ss_dssp             TCCSCEEEESTTCCCC
T ss_pred             CCcCcEEEECcccccC
Confidence            9999999999998753

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=7.9e-52  Score=344.22  Aligned_cols=246  Identities=24%  Similarity=0.380  Sum_probs=216.7

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-c-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-N-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      ++|+||++|||||++|||+++|++|+++|++|++++ + .+.++++.+++.+.   +.++.++.+|+++++  +++++++
T Consensus        14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~---g~~~~~~~~D~~~~~--~v~~~~~   88 (272)
T d1g0oa_          14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN---GSDAACVKANVGVVE--DIVRMFE   88 (272)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTCHH--HHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh---CCceeeEeCCCCCHH--HHHHHHH
Confidence            368999999999999999999999999999999998 4 35566777777654   468999999999999  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++.+.+|++|++|||+|. ....++.+.+.++|++.+++|+.+++.++|.++|+|.+   .|++++|+|..+.... .+.
T Consensus        89 ~~~~~~g~idilV~nag~-~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~---~g~~i~i~s~~~~~~~-~~~  163 (272)
T d1g0oa_          89 EAVKIFGKLDIVCSNSGV-VSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI---GGRLILMGSITGQAKA-VPK  163 (272)
T ss_dssp             HHHHHHSCCCEEEECCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT---TCEEEEECCGGGTCSS-CSS
T ss_pred             HHHHHhCCCCcccccccc-chhhhhhhhhhhHHHHHhhhccceeeeecccccccccc---cccccccccccccccc-ccc
Confidence            999999999999999998 56678999999999999999999999999999999976   5799999988765543 578


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----------cH-HHHHHHhhccCCCCCCCChh
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----------QE-RAVKLVREAAPLHRWLDVKN  227 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----------~~-~~~~~~~~~~~~~~~~~~~~  227 (266)
                      ...|+++|+|+++|+|+++.|++++|||||+|+||+|+|++......          .+ ..........|++|+++|+ 
T Consensus       164 ~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~pe-  242 (272)
T d1g0oa_         164 HAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPI-  242 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHH-
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHH-
Confidence            89999999999999999999999999999999999999997644321          12 2223456789999999998 


Q ss_pred             hHHHHHHHHccCCCCcccccEEEEcCCccc
Q 024517          228 DLASTVIYLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       228 dva~~~~~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      |+|++++||+|+.++++||++|.+|||+++
T Consensus       243 evA~~v~fL~s~~s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         243 DIARVVCFLASNDGGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHHHhCchhcCccCceEeECCCCCC
Confidence            999999999999999999999999999864

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-52  Score=343.91  Aligned_cols=242  Identities=19%  Similarity=0.242  Sum_probs=212.1

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .+||++|||||++|||+++|++|+++|++|++++ +.+++++..+++.+..+ +.++.++.||+++++  +++++++++.
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~--~v~~~~~~~~   77 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE-PQKTLFIQCDVADQQ--QLRDTFRKVV   77 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSC-GGGEEEEECCTTSHH--HHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcC-CCcEEEEEeecCCHH--HHHHHHHHHH
Confidence            3699999999999999999999999999999999 77888888888876544 368999999999998  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC--CCCeEEEEecccccccCCCCCc
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK--AGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      ++||+||++|||||...         .++|++++++|+.+++.+++.++|+|.+++  .+|+||+|||.++..+  .++.
T Consensus        78 ~~~G~iDilVnnAg~~~---------~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~--~~~~  146 (254)
T d2gdza1          78 DHFGRLDILVNNAGVNN---------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP--VAQQ  146 (254)
T ss_dssp             HHHSCCCEEEECCCCCC---------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC--CTTC
T ss_pred             HHcCCcCeecccccccc---------cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccC--CCCc
Confidence            99999999999999832         245899999999999999999999998764  2488999999999887  6899


Q ss_pred             hhhHHhHHHHHHHHHH--HHHHhCCCCcEEEEEecCcccCCCcccccccH------HHHHHHhhccCCCCCCCChhhHHH
Q 024517          160 AAYGACAASIHQLVRT--AAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE------RAVKLVREAAPLHRWLDVKNDLAS  231 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~--la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~  231 (266)
                      .+|+++|+|+.+|+|+  |+.|++++|||||+|+||+|+||++.....++      +..+.+.+..|++|+++|+ |+|+
T Consensus       147 ~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~  225 (254)
T d2gdza1         147 PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPP-LIAN  225 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHH-HHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHH-HHHH
Confidence            9999999999999997  68899999999999999999999886654322      2344566778999999998 9999


Q ss_pred             HHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          232 TVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       232 ~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      .++||+|+.  ++|||.|.+|||.++.=++
T Consensus       226 ~v~fL~s~~--~itG~~i~VdGG~~~~~~~  253 (254)
T d2gdza1         226 GLITLIEDD--ALNGAIMKITTSKGIHFQD  253 (254)
T ss_dssp             HHHHHHHCT--TCSSCEEEEETTTEEEECC
T ss_pred             HHHHHHcCC--CCCCCEEEECCCCeeeccc
Confidence            999999974  5999999999999875443

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-52  Score=339.87  Aligned_cols=239  Identities=21%  Similarity=0.350  Sum_probs=207.1

Q ss_pred             CC-CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 ME-NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~-l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |+ |+||++|||||++|||+++|+.|+++|++|++++ +++++++    +.+.    ..+....+|+++.+  .    ++
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~----~~~~----~~~~~~~~d~~~~~--~----~~   66 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE----LEKY----PGIQTRVLDVTKKK--Q----ID   66 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGG----GGGS----TTEEEEECCTTCHH--H----HH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH----HHhc----cCCceeeeeccccc--c----cc
Confidence            66 8999999999999999999999999999999999 5444433    3322    46778888887654  4    44


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ...+.++++|++|||+|. .+..++.+.+.++|+..+++|+.+++.++|.++|+|.+++ .|+||+++|..+...+ .+.
T Consensus        67 ~~~~~~~~id~lVn~ag~-~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~~~~~~-~~~  143 (245)
T d2ag5a1          67 QFANEVERLDVLFNVAGF-VHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKG-VVN  143 (245)
T ss_dssp             HHHHHCSCCSEEEECCCC-CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBC-CTT
T ss_pred             ccccccccceeEEecccc-cCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC-CceeeeeechhhccCC-ccc
Confidence            555667899999999998 4667888999999999999999999999999999998887 7999999998775432 688


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----cHHHHHHHhhccCCCCCCCChhhHHHHHH
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKLVREAAPLHRWLDVKNDLASTVI  234 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (266)
                      +.+|+++|+|+++|+|+++.|++++|||||+|+||+|+||+..+...    .+...+...+..|++|+++|+ |+|+.+.
T Consensus       144 ~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-dva~~v~  222 (245)
T d2ag5a1         144 RCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAE-EIAMLCV  222 (245)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHH-HHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHH-HHHHHHH
Confidence            99999999999999999999999999999999999999998765432    344566677899999999998 9999999


Q ss_pred             HHccCCCCcccccEEEEcCCccc
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~  257 (266)
                      ||+|+.++++|||+|.+|||+++
T Consensus       223 fL~s~~s~~iTG~~i~VDGG~sl  245 (245)
T d2ag5a1         223 YLASDESAYVTGNPVIIDGGWSL  245 (245)
T ss_dssp             HHHSGGGTTCCSCEEEECTTGGG
T ss_pred             HHhChhhCCCcCceEEeCCCcCC
Confidence            99999999999999999999985

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-51  Score=337.95  Aligned_cols=247  Identities=16%  Similarity=0.163  Sum_probs=215.4

Q ss_pred             CC-CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            1 ME-NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         1 m~-l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |+ +++|++|||||++|||+++|++|+++|++|++++ +.++++++.+++++...+ .++.++.||+++++  +++++++
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~-~~~~~~~~Dls~~~--~v~~~v~   81 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYP-GTLIPYRCDLSNEE--DILSMFS   81 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEEECCTTCHH--HHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC-ceEEEEEccCCCHH--HHHHHHH
Confidence            66 8999999999999999999999999999999999 778889999999876432 57899999999998  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC-CCCeEEEEecccccccCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK-AGGSIVFLTSIIGAERGLYP  157 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~  157 (266)
                      ++.++||+||++|||||. ....++.+.+.++|+..+++|+.+++++.+.++|+|++.+ .+|+||++||.++....+.+
T Consensus        82 ~~~~~~g~iD~lVnnAg~-~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~  160 (257)
T d1xg5a_          82 AIRSQHSGVDICINNAGL-ARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLS  160 (257)
T ss_dssp             HHHHHHCCCSEEEECCCC-CCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCG
T ss_pred             HHHHhcCCCCEEEecccc-cCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCc
Confidence            999999999999999998 5668899999999999999999999999999999987654 36899999999886553356


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHh--CCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          158 GAAAYGACAASIHQLVRTAAMEI--GKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~--~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      ....|+++|+|+.+|+|+++.|+  ++.|||||+|+||+++|++......  ...+......|.+|+++|+ |+|++++|
T Consensus       161 ~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~--~~~~~~~~~~~~~r~~~pe-dvA~~v~f  237 (257)
T d1xg5a_         161 VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHD--KDPEKAAATYEQMKCLKPE-DVAEAVIY  237 (257)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTT--TCHHHHHHHHC---CBCHH-HHHHHHHH
T ss_pred             ccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcCh--hhHHHHHhcCCCCCCcCHH-HHHHHHHH
Confidence            67889999999999999999998  7889999999999999998765432  2234556678999999998 99999999


Q ss_pred             HccCCCCcccccEEEEcCC
Q 024517          236 LISDGSRYMTGTTIYVDGA  254 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG  254 (266)
                      |+|+.++++|||++.-++|
T Consensus       238 L~s~~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         238 VLSTPAHIQIGDIQMRPTG  256 (257)
T ss_dssp             HHHSCTTEEEEEEEEEETT
T ss_pred             HhCChhcCeECCEEEEeCC
Confidence            9999999999997555555

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=2.8e-50  Score=328.30  Aligned_cols=229  Identities=18%  Similarity=0.278  Sum_probs=204.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCe-------EEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCR-------LVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEA   76 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~-------v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~   76 (266)
                      ++++|||||++|||+++|++|+++|++       |++++ +.++++++.+++.+.   +.++.++.||++|++  +++++
T Consensus         1 K~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~---g~~~~~~~~Dvt~~~--~v~~~   75 (240)
T d2bd0a1           1 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE---GALTDTITADISDMA--DVRRL   75 (240)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT---TCEEEEEECCTTSHH--HHHHH
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEecCCCHH--HHHHH
Confidence            357899999999999999999999998       88888 777888888888765   568999999999999  99999


Q ss_pred             HHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC
Q 024517           77 VDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY  156 (266)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  156 (266)
                      ++++.++||++|++|||||. ....++.+.+.++|++++++|+.++++++|+++|+|++++ +|+||++||.++..+  .
T Consensus        76 ~~~~~~~~g~iDilvnnAg~-~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~--~  151 (240)
T d2bd0a1          76 TTHIVERYGHIDCLVNNAGV-GRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKA--F  151 (240)
T ss_dssp             HHHHHHHTSCCSEEEECCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC--C
T ss_pred             HHHHHHHcCCcceeeccccc-ccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhcCC--C
Confidence            99999999999999999998 5678899999999999999999999999999999999887 799999999999887  6


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      ++...|+++|+|+.+|+|+++.|++++|||||+|+||+|+||++.....+.           ..++.+|+ |+|+.++||
T Consensus       152 ~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~~-----------~~~~~~Pe-dvA~~v~~l  219 (240)
T d2bd0a1         152 RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM-----------QALMMMPE-DIAAPVVQA  219 (240)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT-----------GGGSBCHH-HHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHhh-----------HhcCCCHH-HHHHHHHHH
Confidence            899999999999999999999999999999999999999999987643211           13456676 999999999


Q ss_pred             ccCCCCcccccE-EEEcCC
Q 024517          237 ISDGSRYMTGTT-IYVDGA  254 (266)
Q Consensus       237 ~s~~~~~~~G~~-i~~dgG  254 (266)
                      +++++++++|+. +..+||
T Consensus       220 ~s~~~~~~~~~~~i~p~~G  238 (240)
T d2bd0a1         220 YLQPSRTVVEEIILRPTSG  238 (240)
T ss_dssp             HTSCTTEEEEEEEEEETTC
T ss_pred             HcCCccCccCCEEEEecCC
Confidence            998888888874 557776

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=3.3e-50  Score=338.15  Aligned_cols=249  Identities=18%  Similarity=0.259  Sum_probs=220.5

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +|+||++|||||++|||+++|++|+++|++|++++ +.+++++..+++.+..+  .++.++.+|+++.+  +++++++.+
T Consensus        22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g--~~~~~~~~D~~~~~--~v~~~~~~~   97 (294)
T d1w6ua_          22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG--NKVHAIQCDVRDPD--MVQNTVSEL   97 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS--SCEEEEECCTTCHH--HHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcC--CceEEEEecccChH--HHHHHhhhh
Confidence            78999999999999999999999999999999999 77888888888876543  68899999999998  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .+.++++|++|||||. ....++...+.++++..+.+|+.+.+.+.+...+.+......+.+++++|..+..+  .++..
T Consensus        98 ~~~~g~iDilvnnAg~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~--~~~~~  174 (294)
T d1w6ua_          98 IKVAGHPNIVINNAAG-NFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG--SGFVV  174 (294)
T ss_dssp             HHHTCSCSEEEECCCC-CCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC--CTTCH
T ss_pred             hhhccccchhhhhhhh-ccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhc--ccccc
Confidence            9999999999999998 56678889999999999999999999999998888776655788888988887766  58899


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-cHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-QERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      +|+++|+|+++|+|.++.|++++|||||+|+||+|+|++...... .+...+...+..|++|+++|+ |+|+++.||+|+
T Consensus       175 ~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-diA~~v~fL~sd  253 (294)
T d1w6ua_         175 PSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVE-ELANLAAFLCSD  253 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHH-HHHHHHHHHTSG
T ss_pred             hHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHH-HHHHHHHHHhCc
Confidence            999999999999999999999999999999999999999866543 345667778899999999998 999999999999


Q ss_pred             CCCcccccEEEEcCCcccc
Q 024517          240 GSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       240 ~~~~~~G~~i~~dgG~~~~  258 (266)
                      .++|+|||+|.+|||.++.
T Consensus       254 ~s~~itG~~i~vDGG~~l~  272 (294)
T d1w6ua_         254 YASWINGAVIKFDGGEEVL  272 (294)
T ss_dssp             GGTTCCSCEEEESTTHHHH
T ss_pred             hhcCCCCcEEEECCChhhe
Confidence            9999999999999998754

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.2e-49  Score=331.93  Aligned_cols=230  Identities=19%  Similarity=0.230  Sum_probs=199.9

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cc---------cccHHHHHHHhcccCCCCCeEEEEEecCCCch
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE---------RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDRE   70 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   70 (266)
                      |+|+||++|||||++|||+++|++|+++|++|++++ +.         +.++++.+++..      +...+.+|+++.+ 
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~d~~~~~-   75 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR------RGGKAVANYDSVE-   75 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH------TTCEEEEECCCGG-
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh------cccccccccchHH-
Confidence            899999999999999999999999999999999987 32         223444455432      4456778999998 


Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccc
Q 024517           71 GAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG  150 (266)
Q Consensus        71 ~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~  150 (266)
                       +++++++++.++||+||+||||||+ ....++.+.+.++|+.++++|+.++++++|+++|+|++++ .|+||++||..+
T Consensus        76 -~~~~~v~~~~~~~G~iDiLVnNAGi-~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~  152 (302)
T d1gz6a_          76 -AGEKLVKTALDTFGRIDVVVNNAGI-LRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASG  152 (302)
T ss_dssp             -GHHHHHHHHHHHTSCCCEEEECCCC-CCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHH
T ss_pred             -HHHHHHHHHHHHcCCCCEEEECCcc-CCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhh
Confidence             9999999999999999999999998 4668899999999999999999999999999999999887 799999999999


Q ss_pred             cccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHH
Q 024517          151 AERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLA  230 (266)
Q Consensus       151 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  230 (266)
                      ..+  .++...|+++|+|+.+|+|+++.|++++|||||+|+||++.|++....  ++...          +..+|+ |+|
T Consensus       153 ~~~--~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~--~~~~~----------~~~~Pe-dvA  217 (302)
T d1gz6a_         153 IYG--NFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM--PEDLV----------EALKPE-YVA  217 (302)
T ss_dssp             HHC--CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS--CHHHH----------HHSCGG-GTH
T ss_pred             cCC--CCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC--cHhhH----------hcCCHH-HHH
Confidence            887  689999999999999999999999999999999999999988765443  22222          224566 999


Q ss_pred             HHHHHHccCCCCcccccEEEEcCCcc
Q 024517          231 STVIYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      +.++||+|+. +++|||+|.+|||+.
T Consensus       218 ~~v~fL~S~~-a~itG~~i~vdGG~~  242 (302)
T d1gz6a_         218 PLVLWLCHES-CEENGGLFEVGAGWI  242 (302)
T ss_dssp             HHHHHHTSTT-CCCCSCEEEEETTEE
T ss_pred             HHHHHHcCCC-cCCCCcEEEeCCCce
Confidence            9999999875 489999999999963

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=6.9e-48  Score=316.62  Aligned_cols=239  Identities=14%  Similarity=0.113  Sum_probs=194.9

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |+|+||++|||||++|||+++|++|+++|++|++++ +.++.++. +++....+ +.++.++.+|++... +++++++++
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~-~~~~~~~~-~~~~~~~~~d~~~~~-~~~~~~~~~   77 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL-AELKAINP-KVNITFHTYDVTVPV-AESKKLLKK   77 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHH-HHHHHHCT-TSEEEEEECCTTSCH-HHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHH-HHHHhhCC-CCCEEEEEeecCCCH-HHHHHHHHH
Confidence            899999999999999999999999999999999887 66665444 34433333 368999999998432 279999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC--CCCeEEEEecccccccCCCC
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK--AGGSIVFLTSIIGAERGLYP  157 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~g~iv~iss~~~~~~~~~~  157 (266)
                      +.+++|+||+||||||.         .+.++|++++++|+.+++++++.++|+|.+++  .+|+||+++|..+..+  .+
T Consensus        78 ~~~~~g~iDilvnnAG~---------~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~--~~  146 (254)
T d1sbya1          78 IFDQLKTVDILINGAGI---------LDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA--IH  146 (254)
T ss_dssp             HHHHHSCCCEEEECCCC---------CCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC--CT
T ss_pred             HHHHcCCCCEEEeCCCC---------CCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccC--CC
Confidence            99999999999999996         24577999999999999999999999997753  2589999999999877  68


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHc
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI  237 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
                      ++.+|+++|+|+.+|+++|+.|++++|||||+|+||+|+||+.+......+..+.... .+.++...+++++|+.+++++
T Consensus       147 ~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~va~~~~~~~  225 (254)
T d1sbya1         147 QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAE-LLLSHPTQTSEQCGQNFVKAI  225 (254)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHH-HHTTSCCEEHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHh-ccccCCCCCHHHHHHHHHHhh
Confidence            9999999999999999999999999999999999999999976544322222222222 233433444559999998888


Q ss_pred             cCCCCcccccEEEEcCCccc
Q 024517          238 SDGSRYMTGTTIYVDGAQSI  257 (266)
Q Consensus       238 s~~~~~~~G~~i~~dgG~~~  257 (266)
                      +.   ..||+++.+|||...
T Consensus       226 ~~---~~tG~vi~vdgG~l~  242 (254)
T d1sbya1         226 EA---NKNGAIWKLDLGTLE  242 (254)
T ss_dssp             HH---CCTTCEEEEETTEEE
T ss_pred             hC---CCCCCEEEECCCEeC
Confidence            54   359999999999643

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1e-46  Score=311.03  Aligned_cols=246  Identities=22%  Similarity=0.273  Sum_probs=215.0

Q ss_pred             CCCCcEEEEecCCC--chHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGD--EISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~--giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      .|+||++|||||++  |||+++|+.|+++|++|+++++.++..+..+++...   ..+...+.+|+++..  ++...+++
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~   76 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ---LGSDIVLQCDVAEDA--SIDTMFAE   76 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHH---TTCCCEEECCTTCHH--HHHHHHHH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhh---cCCcceeecccchHH--HHHHHHHH
Confidence            37899999999998  899999999999999999999556666655555444   246778888999988  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCC----CCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQ----DPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL  155 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~  155 (266)
                      +.+.++++|++|||++......    .......+.|...+.+|+.+.+.+++.+.++|.+   ++.|+++||..+..+  
T Consensus        77 ~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Ii~iss~~~~~~--  151 (258)
T d1qsga_          77 LGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAERA--  151 (258)
T ss_dssp             HHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSB--
T ss_pred             hhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEecchhhccC--
Confidence            9999999999999998742211    1234567889999999999999999999999865   568999999988777  


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      .+.+..|+++|+|+++|+|++++|++++|||||+|+||+|+|++.......+.......+..|++|+++|+ |+|+.+.|
T Consensus       152 ~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-eia~~v~f  230 (258)
T d1qsga_         152 IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIE-DVGNSAAF  230 (258)
T ss_dssp             CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHH-HHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHH-HHHHHHHH
Confidence            68889999999999999999999999999999999999999999887666677777788899999999998 99999999


Q ss_pred             HccCCCCcccccEEEEcCCcccc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      |+|+.++++|||+|.+|||++++
T Consensus       231 L~s~~s~~itG~~i~vDGG~~i~  253 (258)
T d1qsga_         231 LCSDLSAGISGEVVHVDGGFSIA  253 (258)
T ss_dssp             HTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HhCchhcCccCceEEECcCHHHh
Confidence            99999999999999999999876

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.6e-47  Score=313.87  Aligned_cols=241  Identities=15%  Similarity=0.144  Sum_probs=209.6

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHH---cCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAK---RGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAV   77 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~---~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~   77 (266)
                      .|+||++|||||++|||+++|++|++   +|++|++++ +.++++++.+++....+ +.++.++.||+++++  ++++++
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~-~~~~~~~~~Dvs~~~--~v~~l~   79 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQP-DLKVVLAAADLGTEA--GVQRLL   79 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCT-TSEEEEEECCTTSHH--HHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcC-CceEEEEEccCCCHH--HHHHHH
Confidence            47899999999999999999999996   799999999 77889999999877654 368999999999999  999999


Q ss_pred             HHHHHH----hCCCCEEEEcCCCCC--CCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC-CCCeEEEEecccc
Q 024517           78 DKACQI----LGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK-AGGSIVFLTSIIG  150 (266)
Q Consensus        78 ~~~~~~----~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~iv~iss~~~  150 (266)
                      +.+.+.    ++.+|++|||||...  +..++.+.+.++|++++++|+.++++++|.++|+|++++ ..|+||++||.++
T Consensus        80 ~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~  159 (259)
T d1oaaa_          80 SAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCA  159 (259)
T ss_dssp             HHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGG
T ss_pred             HHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccc
Confidence            998763    457899999999743  335677889999999999999999999999999998764 2489999999999


Q ss_pred             cccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccc---ccHHHHHHHhhccCCCCCCCChh
Q 024517          151 AERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV---GQERAVKLVREAAPLHRWLDVKN  227 (266)
Q Consensus       151 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  227 (266)
                      ..+  .+++..|+++|+|+++|+|+++.|  .+|||||+|+||+|+|++.....   .+++..+.+....|.++.++|+ 
T Consensus       160 ~~~--~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~-  234 (259)
T d1oaaa_         160 LQP--YKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCG-  234 (259)
T ss_dssp             TSC--CTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHH-
T ss_pred             cCC--CccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHH-
Confidence            887  689999999999999999999999  57999999999999999875432   2345556666777889999998 


Q ss_pred             hHHHHHHHHccCCCCcccccEEEE
Q 024517          228 DLASTVIYLISDGSRYMTGTTIYV  251 (266)
Q Consensus       228 dva~~~~~l~s~~~~~~~G~~i~~  251 (266)
                      |+|+.+++|+++ .+++|||.|.+
T Consensus       235 evA~~i~~ll~~-~s~~TG~~idv  257 (259)
T d1oaaa_         235 TSAQKLLGLLQK-DTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHHHHHHH-CCSCTTEEEET
T ss_pred             HHHHHHHHHhhh-ccCCCCCeEEe
Confidence            999999999986 47999999875

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=8.5e-46  Score=309.58  Aligned_cols=242  Identities=24%  Similarity=0.312  Sum_probs=196.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-c-ccccHHHHHHHhcccCCCCCeEE-----------------EEEecC
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-N-ERRLSSVAEKMMGSLKGGQPVEV-----------------VGLDME   66 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~D~~   66 (266)
                      .++|||||++|||+++|++|+++|++|++++ + .+..+++.+++.+..+  .....                 +.+|++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~dv~   80 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP--NSAITVQADLSNVATAPVSGADGSAPVT   80 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSSSCBCCCC----CCCBC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcC--CceEEEEeecccccccccccccccccCC
Confidence            5799999999999999999999999999987 4 3556667777765543  24444                 445688


Q ss_pred             CCchHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHH--------------HHHHccchHHHHHHHHHHHH
Q 024517           67 EDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFK--------------KLVKINFVAPWFLLKAVGRR  132 (266)
Q Consensus        67 ~~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~--------------~~~~~n~~~~~~l~~~~~~~  132 (266)
                      +.+  +++++++++.++||+||+||||||.. ...++.+.+.++|+              .++.+|+.+++++.|.+.+.
T Consensus        81 ~~~--~v~~~~~~~~~~~G~iDiLVnnAG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  157 (284)
T d1e7wa_          81 LFT--RCAELVAACYTHWGRCDVLVNNASSF-YPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  157 (284)
T ss_dssp             HHH--HHHHHHHHHHHHHSCCCEEEECCCCC-CCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CHH--HHHHHHHHHHHHhCCCCEEEecCCcc-CCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccch
Confidence            888  99999999999999999999999984 44566655555444              57899999999999999987


Q ss_pred             Hhc-----cCCCCeEEEEecccccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccH
Q 024517          133 MKE-----SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE  207 (266)
Q Consensus       133 ~~~-----~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~  207 (266)
                      +..     +...+.|++++|..+..+  .+++.+|+++|+|+++|+|++++|++++|||||+|+||++.+...    .++
T Consensus       158 ~~~~~~~~~~~~~~ii~~~s~~~~~~--~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~----~~~  231 (284)
T d1e7wa_         158 VAGTPAKHRGTNYSIINMVDAMTNQP--LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD----MPP  231 (284)
T ss_dssp             HHTSCGGGSCSCEEEEEECCTTTTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG----SCH
T ss_pred             hhhhHHHhcCCCCcccccccccccCC--ccceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc----CCH
Confidence            643     222578999999887666  688999999999999999999999999999999999998655432    134


Q ss_pred             HHHHHHhhccCC-CCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccC
Q 024517          208 RAVKLVREAAPL-HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       208 ~~~~~~~~~~~~-~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      +..+...+..|+ +|+++|+ |+|++++||+|+.++|+|||+|.+|||+++++
T Consensus       232 ~~~~~~~~~~pl~~R~~~pe-eiA~~v~fL~S~~s~~itG~~i~VDGG~sl~r  283 (284)
T d1e7wa_         232 AVWEGHRSKVPLYQRDSSAA-EVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR  283 (284)
T ss_dssp             HHHHHHHTTCTTTTSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHHHHHHhcCCCCCCCCCHH-HHHHHHHHHhCchhcCccCCeEEECcChhccC
Confidence            556667777886 8999998 99999999999999999999999999999986

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-45  Score=302.68  Aligned_cols=235  Identities=20%  Similarity=0.275  Sum_probs=201.5

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +|+||++|||||++|||+++|++|+++|++|++++ +.+.+++..+++.      .+.....+|+.+.+  .++...+++
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~------~~~~~~~~~~~~~~--~~~~~~~~~   73 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG------NNCVFAPADVTSEK--DVQTALALA   73 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC------TTEEEEECCTTCHH--HHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC------CCcccccccccccc--ccccccccc
Confidence            68999999999999999999999999999999999 7888888877773      57889999999988  999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCC-----CCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhcc-----CCCCeEEEEecccc
Q 024517           81 CQILGNLDAFVHCYTYEGK-----MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES-----KAGGSIVFLTSIIG  150 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~g~iv~iss~~~  150 (266)
                      ...++.+|.++++++....     ..++.+.+.++|++++++|+.++++++|++.|+|...     .++|+||++||..+
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~  153 (248)
T d2o23a1          74 KGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAA  153 (248)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH
T ss_pred             ccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhh
Confidence            9999999999999865322     2456678899999999999999999999999998654     12689999999999


Q ss_pred             cccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCC-CCCCCChhhH
Q 024517          151 AERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPL-HRWLDVKNDL  229 (266)
Q Consensus       151 ~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dv  229 (266)
                      ..+  .+++.+|+++|+|+++|+|++++|++++|||||+|+||+++|++....  .++..+...+..|+ +|+++|+ |+
T Consensus       154 ~~~--~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~~R~g~pe-ev  228 (248)
T d2o23a1         154 FEG--QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL--PEKVCNFLASQVPFPSRLGDPA-EY  228 (248)
T ss_dssp             HHC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHTCSSSCSCBCHH-HH
T ss_pred             ccC--CCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcC--CHHHHHHHHhcCCCCCCCcCHH-HH
Confidence            877  689999999999999999999999999999999999999999998764  34455666677886 8999998 99


Q ss_pred             HHHHHHHccCCCCcccccEEEE
Q 024517          230 ASTVIYLISDGSRYMTGTTIYV  251 (266)
Q Consensus       230 a~~~~~l~s~~~~~~~G~~i~~  251 (266)
                      |++++||++  ++|+|||+|.|
T Consensus       229 A~~v~fL~s--~~~itGq~I~v  248 (248)
T d2o23a1         229 AHLVQAIIE--NPFLNGEVIRL  248 (248)
T ss_dssp             HHHHHHHHH--CTTCCSCEEEE
T ss_pred             HHHHHHHHh--CCCCCceEeEC
Confidence            999999997  47999999976

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1.1e-45  Score=310.93  Aligned_cols=252  Identities=21%  Similarity=0.228  Sum_probs=205.9

Q ss_pred             CCCCCcEEEEecCCC--chHHHHHHHHHHcCCeEEEEecccccHHHHHHHhccc-------CCC---CCeEEEEEe----
Q 024517            1 MENQAKRVLLTSDGD--EISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSL-------KGG---QPVEVVGLD----   64 (266)
Q Consensus         1 m~l~~k~vlItGa~~--giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-------~~~---~~~~~~~~D----   64 (266)
                      |+|+||++|||||++  |||+++|++|+++|++|+++++...............       ..+   .......+|    
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            789999999999875  9999999999999999999985444333333322110       000   111344444    


Q ss_pred             ----------------cCCCchHHHHHHHHHHHHHhCCCCEEEEcCCCCCC-CCCCCCCCHHHHHHHHHccchHHHHHHH
Q 024517           65 ----------------MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINFVAPWFLLK  127 (266)
Q Consensus        65 ----------------~~~~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~  127 (266)
                                      .++..  +++++++++.++||+||++|||||.... ..++.+.+.++|++.+++|+.+++.+++
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~--~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNW--TVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCC--SHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccchhhhhhhhhhhhccHH--HHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence                            34555  7789999999999999999999997432 3578889999999999999999999999


Q ss_pred             HHHHHHhccCCCCeEEEEecccccccCCCCCchhhHHhHHHHHHHHHHHHHHhC-CCCcEEEEEecCcccCCCccccccc
Q 024517          128 AVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG-KHKIRVNGIARGLHLQDEYPIAVGQ  206 (266)
Q Consensus       128 ~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~pG~v~t~~~~~~~~~  206 (266)
                      +++|.|.+   ++.++++++....... .+....|+++|+++..+++.++.+++ ++|||||+|+||+|+|++.......
T Consensus       162 ~~~~~~~~---~g~~~~~~~~~~~~~~-~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~  237 (297)
T d1d7oa_         162 HFLPIMNP---GGASISLTYIASERII-PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFI  237 (297)
T ss_dssp             HHGGGEEE---EEEEEEEECGGGTSCC-TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHH
T ss_pred             HHHHHhhc---CCcceeeeehhhcccc-cccccceecccccccccccccchhccccceEEecccccccccchhhhhccCC
Confidence            99998876   4567777776655442 47778899999999999999999996 5799999999999999998876556


Q ss_pred             HHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccC
Q 024517          207 ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      ++..+...+..|++|+++|+ |+|++++||+|+.++|+|||+|.+|||++.+.
T Consensus       238 ~~~~~~~~~~~PlgR~~~pe-evA~~v~fL~S~~a~~itGq~i~vDGG~s~~G  289 (297)
T d1d7oa_         238 DTMIEYSYNNAPIQKTLTAD-EVGNAAAFLVSPLASAITGATIYVDNGLNSMG  289 (297)
T ss_dssp             HHHHHHHHHHSSSCCCBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTGGGCS
T ss_pred             HHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCchhcCCcCceEEECcCHhhcC
Confidence            67778888899999999998 99999999999999999999999999987654

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.4e-45  Score=314.15  Aligned_cols=248  Identities=21%  Similarity=0.266  Sum_probs=200.7

Q ss_pred             CCcEEEEec--CCCchHHHHHHHHHHcCCeEEEEecccccHH-HHHHHhcccC---------CCCCeEEEEE--------
Q 024517            4 QAKRVLLTS--DGDEISKNIAFHLAKRGCRLVLVGNERRLSS-VAEKMMGSLK---------GGQPVEVVGL--------   63 (266)
Q Consensus         4 ~~k~vlItG--a~~giG~~ia~~l~~~g~~v~~~~~~~~~~~-~~~~~~~~~~---------~~~~~~~~~~--------   63 (266)
                      ++|++||||  +++|||+++|++|+++|++|+++++...... ......+.+.         .......+.+        
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            479999999  5589999999999999999999984433332 2222221110         0111233333        


Q ss_pred             ------------ecCCCchHHHHHHHHHHHHHhCCCCEEEEcCCCCCCC-CCCCCCCHHHHHHHHHccchHHHHHHHHHH
Q 024517           64 ------------DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM-QDPLQVGEDEFKKLVKINFVAPWFLLKAVG  130 (266)
Q Consensus        64 ------------D~~~~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  130 (266)
                                  |+++.+  +++++++++.+.||+||++|||+|...+. .++.+.+.++|+..+++|+++++.++|+++
T Consensus        81 ~~~~~~~~~~~~d~~~~~--~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~  158 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNY--TIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFV  158 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCC--SHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             ccchhhhhhhhhhhhhHH--HHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHH
Confidence                        566777  89999999999999999999999975432 578889999999999999999999999999


Q ss_pred             HHHhccCCCCeEEEEecccccccCCCCC-chhhHHhHHHHHHHHHHHHHHhCC-CCcEEEEEecCcccCCCccc------
Q 024517          131 RRMKESKAGGSIVFLTSIIGAERGLYPG-AAAYGACAASIHQLVRTAAMEIGK-HKIRVNGIARGLHLQDEYPI------  202 (266)
Q Consensus       131 ~~~~~~~~~g~iv~iss~~~~~~~~~~~-~~~y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~pG~v~t~~~~~------  202 (266)
                      |+|++   +|+||++||..+..+  .|+ ...|+++|+|+++|+|+++.||++ +|||||+|+||+|+|+....      
T Consensus       159 ~~m~~---~GsIv~iss~~~~~~--~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~  233 (329)
T d1uh5a_         159 NIMKP---QSSIISLTYHASQKV--VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNN  233 (329)
T ss_dssp             GGEEE---EEEEEEEECGGGTSC--CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC----
T ss_pred             hhccc---ccccccceeehhccc--ccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhh
Confidence            99965   589999999988766  565 457899999999999999999986 59999999999999953321      


Q ss_pred             -------------------------------------ccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCCCCccc
Q 024517          203 -------------------------------------AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMT  245 (266)
Q Consensus       203 -------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  245 (266)
                                                           ....+...+......|++|+++|+ |+|++++||+|+.++++|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pe-dvA~~v~fLaSd~s~~iT  312 (329)
T d1uh5a_         234 TYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLST-DIGSVASFLLSRESRAIT  312 (329)
T ss_dssp             --------------------------------------CHHHHHHHHHHHHSSSCSCCCHH-HHHHHHHHHHSGGGTTCC
T ss_pred             hhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHH-HHHHHHHHHhCchhCCcc
Confidence                                                 111345566777889999999998 999999999999999999


Q ss_pred             ccEEEEcCCccccC
Q 024517          246 GTTIYVDGAQSITR  259 (266)
Q Consensus       246 G~~i~~dgG~~~~~  259 (266)
                      ||+|.+|||++++.
T Consensus       313 Gq~i~VDGG~~~~g  326 (329)
T d1uh5a_         313 GQTIYVDNGLNIMF  326 (329)
T ss_dssp             SCEEEESTTGGGCS
T ss_pred             CCeEEECCCccccc
Confidence            99999999998864

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-46  Score=303.46  Aligned_cols=218  Identities=19%  Similarity=0.220  Sum_probs=193.6

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++++||++|||||++|||+++|++|+++|++|++++ +.++++++.+++...   +.++.++.||++|.+  ++++++++
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~---~~~~~~~~~Dvs~~~--~v~~~~~~   77 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL---GAKVHTFVVDCSNRE--DIYSSAKK   77 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHH--HHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEeeCCCHH--HHHHHHHH
Confidence            478999999999999999999999999999999999 888899999998754   468999999999999  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                      +.+.+|++|++|||||. ....++.+.+.++|++++++|+.++++++++++|+|.+++ .|+||++||..+..+  .+++
T Consensus        78 i~~~~g~idilinnag~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~~~--~~~~  153 (244)
T d1yb1a_          78 VKAEIGDVSILVNNAGV-VYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVS--VPFL  153 (244)
T ss_dssp             HHHHTCCCSEEEECCCC-CCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCC--HHHH
T ss_pred             HHHHcCCCceeEeeccc-cccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhcCC--CCCc
Confidence            99999999999999998 5667788899999999999999999999999999999887 799999999999877  6899


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCC---CCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGK---HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~---~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      +.|+++|+|+.+|+++|+.|+++   +||+||+|+||+|+|++.....            .+..+..+|+ ++|+.+...
T Consensus       154 ~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~------------~~~~~~~~pe-~va~~i~~~  220 (244)
T d1yb1a_         154 LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS------------TSLGPTLEPE-EVVNRLMHG  220 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH------------HHHCCCCCHH-HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC------------ccccCCCCHH-HHHHHHHHH
Confidence            99999999999999999999865   5899999999999999876521            0123445666 999999887


Q ss_pred             ccCC
Q 024517          237 ISDG  240 (266)
Q Consensus       237 ~s~~  240 (266)
                      +...
T Consensus       221 ~~~~  224 (244)
T d1yb1a_         221 ILTE  224 (244)
T ss_dssp             HHTT
T ss_pred             HhcC
Confidence            6443

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=1.2e-44  Score=301.15  Aligned_cols=246  Identities=20%  Similarity=0.268  Sum_probs=201.4

Q ss_pred             CCCCcEEEEecCCC--chHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGD--EISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~--giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      .|+||++|||||++  |||+++|++|+++|++|+++++++++++..+++.+.   +....++.+|+++.+  ++++++++
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~---~~~~~~~~~d~~~~~--~~~~~~~~   76 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQE---LNSPYVYELDVSKEE--HFKSLYNS   76 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHH---TTCCCEEECCTTCHH--HHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh---CCceeEeeecccchh--hHHHHHHH
Confidence            37899999999765  999999999999999999999667777777777665   356788999999988  99999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCC---CCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCC
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQ---DPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY  156 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  156 (266)
                      +.+.+|++|++|||+|......   .........+...+.++..+...+.+...+.+..   ++.|+++++.+...+  .
T Consensus        77 ~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~s~~~~~~~--~  151 (274)
T d2pd4a1          77 VKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN---GASVLTLSYLGSTKY--M  151 (274)
T ss_dssp             HHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSB--C
T ss_pred             HHHHcCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccccc---Ccceeeecccccccc--c
Confidence            9999999999999999754322   3333445555555555555555555555443322   345555555544443  5


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL  236 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
                      +....|+++|+|+++|+|+++.|++++|||||+|+||++.|++.......+..........|++|+++|+ |+|+.+.||
T Consensus       152 ~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dIA~~v~fL  230 (274)
T d2pd4a1         152 AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLE-EVGNAGMYL  230 (274)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHH-HHHHHHHHH
T ss_pred             ccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHH-HHHHHHHHH
Confidence            7889999999999999999999999999999999999999999887766677777778889999999998 999999999


Q ss_pred             ccCCCCcccccEEEEcCCcccc
Q 024517          237 ISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       237 ~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      +|+.+.++|||+|.+|||++++
T Consensus       231 ~S~~s~~itG~~i~vDGG~~~~  252 (274)
T d2pd4a1         231 LSSLSSGVSGEVHFVDAGYHVM  252 (274)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGB
T ss_pred             hChhhCCCcCceEEECCChhhc
Confidence            9999999999999999999875

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-44  Score=297.38  Aligned_cols=236  Identities=17%  Similarity=0.180  Sum_probs=187.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe----cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG----NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      .|++|||||++|||+++|++|+++|++|++++    +.+..+++.+..++....+.++..+.||++|.+  +++++++++
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~--~~~~~~~~~   79 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSK--SVAAARERV   79 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHH--HHHHHHHTC
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchH--hhhhhhhhc
Confidence            68899999999999999999999999866543    223344444444433333578999999999999  999999887


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                      .  .|++|++|||+|. ....++.+.+.++|+.++++|+.++++++|+++|+|++++ .|+||++||.++..+  .++..
T Consensus        80 ~--~g~idilvnnag~-~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~~~--~~~~~  153 (285)
T d1jtva_          80 T--EGRVDVLVCNAGL-GLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMG--LPFND  153 (285)
T ss_dssp             T--TSCCSEEEECCCC-CCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSC--CTTCH
T ss_pred             c--ccchhhhhhcccc-cccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhcCC--CCCch
Confidence            4  3889999999998 5668888999999999999999999999999999999887 799999999999887  68999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHH-------------HHHH--HhhccCCCCCCCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQER-------------AVKL--VREAAPLHRWLDV  225 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~-------------~~~~--~~~~~~~~~~~~~  225 (266)
                      .|+++|+|+.+|+++++.|++++|||||+|+||+|+|++........+             +.+.  .....|..+.++|
T Consensus       154 ~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P  233 (285)
T d1jtva_         154 VYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNP  233 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCH
Confidence            999999999999999999999999999999999999999866543211             1111  1123344566777


Q ss_pred             hhhHHHHHHHHccCC---CCcccccEE
Q 024517          226 KNDLASTVIYLISDG---SRYMTGTTI  249 (266)
Q Consensus       226 ~~dva~~~~~l~s~~---~~~~~G~~i  249 (266)
                      + |+|+.++++++..   .+|++|+.+
T Consensus       234 e-eVA~~v~~~~~~~~p~~ry~~g~~~  259 (285)
T d1jtva_         234 E-EVAEVFLTALRAPKPTLRYFTTERF  259 (285)
T ss_dssp             H-HHHHHHHHHHHCSSCCSEEESCSTT
T ss_pred             H-HHHHHHHHHHhCCCCCeEEecHHHH
Confidence            7 9999999998653   367887654

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=4.7e-42  Score=284.10  Aligned_cols=245  Identities=24%  Similarity=0.332  Sum_probs=199.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccc-cHHHHHHHhcccCCCCCeEEEEEecCCCc--hHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERR-LSSVAEKMMGSLKGGQPVEVVGLDMEEDR--EGAFDEAVDKAC   81 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--~~~v~~~~~~~~   81 (266)
                      .++|||||++|||+++|++|+++|++|++++ +.++ .+++.+++.+..+  .+...+.+|+.+..  ++.++++++++.
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA--GSAVLCKGDLSLSSSLLDCCEDIIDCSF   79 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcC--CceEEEecccccchhHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999 5444 4566777766543  57777777776543  336788888899


Q ss_pred             HHhCCCCEEEEcCCCCCCCCC----------CCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC----CCCeEEEEec
Q 024517           82 QILGNLDAFVHCYTYEGKMQD----------PLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK----AGGSIVFLTS  147 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~----------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~~g~iv~iss  147 (266)
                      ++||+||++|||||+..+...          ........+...+..|+.+.+...+...+.+....    ..+.++++++
T Consensus        80 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (266)
T d1mxha_          80 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD  159 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred             HHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhh
Confidence            999999999999998433211          12234566888999999999999998888775432    2478888888


Q ss_pred             ccccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCC-CCCh
Q 024517          148 IIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRW-LDVK  226 (266)
Q Consensus       148 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  226 (266)
                      ..+..+  .+++..|+++|+|+++|+|.++.|++++|||||+|+||+++|++...    ++..+.+.+..|++|. ++|+
T Consensus       160 ~~~~~~--~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~----~~~~~~~~~~~pl~r~~~~pe  233 (266)
T d1mxha_         160 AMTDLP--LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP----QETQEEYRRKVPLGQSEASAA  233 (266)
T ss_dssp             GGGGSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC----HHHHHHHHTTCTTTSCCBCHH
T ss_pred             cccccc--CcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC----HHHHHHHHhcCCCCCCCCCHH
Confidence            887666  68999999999999999999999999999999999999999987643    5566677788999764 7887


Q ss_pred             hhHHHHHHHHccCCCCcccccEEEEcCCccccC
Q 024517          227 NDLASTVIYLISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       227 ~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                       |+|++++||+|+.+.|+|||+|.+|||+++.+
T Consensus       234 -eva~~v~fL~s~~s~~itG~~i~vDGG~~l~~  265 (266)
T d1mxha_         234 -QIADAIAFLVSKDAGYITGTTLKVDGGLILAR  265 (266)
T ss_dssp             -HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             -HHHHHHHHHhCchhCCccCCeEEECccHhhhC
Confidence             99999999999999999999999999999875

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.7e-42  Score=281.57  Aligned_cols=230  Identities=23%  Similarity=0.314  Sum_probs=189.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      .|++|||||++|||+++|++|+++|++|+++++.+.              +.+.....+|+++..  .+..+.......+
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~--------------~~~~~~~~~d~~~~~--~~~~~~~~~~~~~   64 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--------------GEDLIYVEGDVTREE--DVRRAVARAQEEA   64 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--------------SSSSEEEECCTTCHH--HHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc--------------cccceEeeccccchh--hhHHHHHhhhccc
Confidence            589999999999999999999999999999994321              246678889999988  8888888877665


Q ss_pred             CCCCEEEEcCCCCC---CCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhcc-----CCCCeEEEEecccccccCCC
Q 024517           85 GNLDAFVHCYTYEG---KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES-----KAGGSIVFLTSIIGAERGLY  156 (266)
Q Consensus        85 g~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~g~iv~iss~~~~~~~~~  156 (266)
                      . .+.++++++...   ........+.+.|++++++|+.+++.+++.+.+.+.+.     ...|+||++||..+..+  .
T Consensus        65 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~--~  141 (241)
T d1uaya_          65 P-LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG--Q  141 (241)
T ss_dssp             C-EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC--C
T ss_pred             c-ccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccC--C
Confidence            4 455555555422   22345567789999999999999999999999985432     12699999999999887  6


Q ss_pred             CCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCC-CCCCCChhhHHHHHHH
Q 024517          157 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPL-HRWLDVKNDLASTVIY  235 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~  235 (266)
                      ++..+|+++|+|+++|+|+++.|++++|||||+|+||+|+|++.....  +..........|+ +|+++|+ |+|+.++|
T Consensus       142 ~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~--~~~~~~~~~~~~~~~R~g~pe-dvA~~v~f  218 (241)
T d1uaya_         142 IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP--EKAKASLAAQVPFPPRLGRPE-EYAALVLH  218 (241)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC--HHHHHHHHTTCCSSCSCCCHH-HHHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhh--hhHHHHHHhcCCCCCCCcCHH-HHHHHHHH
Confidence            899999999999999999999999999999999999999999887653  3334444555565 8999998 99999999


Q ss_pred             HccCCCCcccccEEEEcCCcccc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      |+|+  +|+|||+|.+|||+++.
T Consensus       219 L~s~--~~iTG~~i~VDGG~~m~  239 (241)
T d1uaya_         219 ILEN--PMLNGEVVRLDGALRMA  239 (241)
T ss_dssp             HHHC--TTCCSCEEEESTTCCCC
T ss_pred             HHhC--CCCCCCEEEECCcccCC
Confidence            9984  79999999999998753

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=9.1e-42  Score=279.61  Aligned_cols=226  Identities=18%  Similarity=0.229  Sum_probs=187.2

Q ss_pred             cEEEEecCCCchHHHHHHHHH---HcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLA---KRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~---~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      |+||||||++|||+++|++|+   ++|++|++++ +.++++++.+....    +.++.++.||++|++  +++++++++.
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dvs~~~--~v~~~~~~i~   76 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN----HSNIHILEIDLRNFD--AYDKLVADIE   76 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHH----CTTEEEEECCTTCGG--GHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhc----CCcEEEEEEEeccHH--HHHHHHhhhH
Confidence            689999999999999999997   5799999999 77777776544332    368999999999999  9999999985


Q ss_pred             H--HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC----------CCCeEEEEeccc
Q 024517           82 Q--ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK----------AGGSIVFLTSII  149 (266)
Q Consensus        82 ~--~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----------~~g~iv~iss~~  149 (266)
                      +  .+++||++|||||+.....++.+.+.++|+.++++|+.+++.++++++|+|+++.          ..|++|+++|..
T Consensus        77 ~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~  156 (248)
T d1snya_          77 GVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL  156 (248)
T ss_dssp             HHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred             HHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccc
Confidence            4  6789999999999866666788899999999999999999999999999997641          258999999998


Q ss_pred             ccccC-CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhh
Q 024517          150 GAERG-LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKND  228 (266)
Q Consensus       150 ~~~~~-~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  228 (266)
                      +.... +.+++.+|++||+|+.+|+++++.|++++|||||+|+||+|+|++.....             |    .+++ +
T Consensus       157 g~~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~-------------~----~~~~-~  218 (248)
T d1snya_         157 GSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSA-------------P----LDVP-T  218 (248)
T ss_dssp             GCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTC-------------S----BCHH-H
T ss_pred             cccCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccC-------------C----CCch-H
Confidence            76432 24678899999999999999999999999999999999999999875421             1    1233 4


Q ss_pred             HHHHHHHHccCCCCcccccEEEEcCCc
Q 024517          229 LASTVIYLISDGSRYMTGTTIYVDGAQ  255 (266)
Q Consensus       229 va~~~~~l~s~~~~~~~G~~i~~dgG~  255 (266)
                      .++.++.++.......+|++|.+||+.
T Consensus       219 ~~~~i~~~i~~l~~~~tG~~i~~dG~~  245 (248)
T d1snya_         219 STGQIVQTISKLGEKQNGGFVNYDGTP  245 (248)
T ss_dssp             HHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHHHHHHHhcCccCCCcEEEECCeE
Confidence            455555555444456799999999974

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=1.3e-41  Score=281.83  Aligned_cols=242  Identities=21%  Similarity=0.257  Sum_probs=197.0

Q ss_pred             CCCcEEEEec--CCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            3 NQAKRVLLTS--DGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         3 l~~k~vlItG--a~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |+||++||||  |++|||+++|++|+++|++|++++ +.++   ..+++.+..  +.+...++||+++.+  +++.+++.
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~---~~~~~~~~~--~~~~~~~~~dv~~~~--~~~~~~~~   76 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLR---LIQRITDRL--PAKAPLLELDVQNEE--HLASLAGR   76 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHH---HHHHHHTTS--SSCCCEEECCTTCHH--HHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHH---HHHHHHHHc--CCceeeEeeeccccc--ccccccch
Confidence            6899999999  467999999999999999999998 4433   334444443  357888999999988  99999999


Q ss_pred             HHHHh---CCCCEEEEcCCCCC----CCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccc
Q 024517           80 ACQIL---GNLDAFVHCYTYEG----KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAE  152 (266)
Q Consensus        80 ~~~~~---g~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~  152 (266)
                      +.+.+   +.+|+++||+|+..    ...++.+.+.++|...+.+|+...+...+...+++..    +.+++++|.....
T Consensus        77 v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~s~~~~~  152 (268)
T d2h7ma1          77 VTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP----GGSIVGMDFDPSR  152 (268)
T ss_dssp             HHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE----EEEEEEEECCCSS
T ss_pred             hhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc----ccccccccccccc
Confidence            98765   56999999999742    2235667889999999999999999999888776543    4455555555544


Q ss_pred             cCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----------cHHHHHHHhhccCCCC-
Q 024517          153 RGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----------QERAVKLVREAAPLHR-  221 (266)
Q Consensus       153 ~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----------~~~~~~~~~~~~~~~~-  221 (266)
                      .  .|.+..|+++|+|+.+|+|++++|++++|||||+|+||+|.|++......          .+...+......|++| 
T Consensus       153 ~--~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr  230 (268)
T d2h7ma1         153 A--MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWN  230 (268)
T ss_dssp             C--CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCC
T ss_pred             c--CcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCC
Confidence            4  68899999999999999999999999999999999999999987643321          1223345567788876 


Q ss_pred             CCCChhhHHHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          222 WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       222 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      +++|+ |+|+.+.||+|+.++++|||+|.+|||++..
T Consensus       231 ~~~p~-dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~~  266 (268)
T d2h7ma1         231 MKDAT-PVAKTVCALLSDWLPATTGDIIYADGGAHTQ  266 (268)
T ss_dssp             TTCCH-HHHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             CCCHH-HHHHHHHHHhCchhcCccCCEEEECcCcccc
Confidence            78888 9999999999999999999999999999753

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.4e-42  Score=280.90  Aligned_cols=228  Identities=15%  Similarity=0.153  Sum_probs=187.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +||++|||||++|||+++|++|+++|++|+++++.+..+            ......+.+|.++.+  +++.+.+++.+.
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~--~~~~~~~~~~~~   66 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------ASASVIVKMTDSFTE--QADQVTAEVGKL   66 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------SSEEEECCCCSCHHH--HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccccceeecccCcHH--HHHHHHHHHHHH
Confidence            589999999999999999999999999999998322211            124455667777766  888888888776


Q ss_pred             hC--CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           84 LG--NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        84 ~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      ++  +||++|||||......++.+.+.++|+.++++|+.+++.+++.++|+|++   +|+||++||.++..+  .+++.+
T Consensus        67 ~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~~~--~~~~~~  141 (236)
T d1dhra_          67 LGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAALDG--TPGMIG  141 (236)
T ss_dssp             HTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSC--CTTBHH
T ss_pred             hCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc---ccceeEEccHHHcCC--ccCCcc
Confidence            54  69999999997555566677778999999999999999999999999965   589999999999877  689999


Q ss_pred             hHHhHHHHHHHHHHHHHHhC--CCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccC
Q 024517          162 YGACAASIHQLVRTAAMEIG--KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD  239 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  239 (266)
                      |++||+|+++|+|+++.|++  ++|||||+|+||+|+||+.+....+          .+..++..|+ ++|+.+.+|+++
T Consensus       142 Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~----------~~~~~~~~pe-~va~~~~~l~s~  210 (236)
T d1dhra_         142 YGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE----------ADFSSWTPLE-FLVETFHDWITG  210 (236)
T ss_dssp             HHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT----------SCGGGSEEHH-HHHHHHHHHHTT
T ss_pred             cHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCcc----------chhhcCCCHH-HHHHHHHHHhCC
Confidence            99999999999999999998  5799999999999999986443211          1223444455 999999999999


Q ss_pred             CCCcccccEEEE--cCCccccCCC
Q 024517          240 GSRYMTGTTIYV--DGAQSITRPR  261 (266)
Q Consensus       240 ~~~~~~G~~i~~--dgG~~~~~~~  261 (266)
                      ...+++|+.+.+  ++|.+...|.
T Consensus       211 ~~~~i~G~~i~v~~~~g~t~~~p~  234 (236)
T d1dhra_         211 NKRPNSGSLIQVVTTDGKTELTPA  234 (236)
T ss_dssp             TTCCCTTCEEEEEEETTEEEEEEE
T ss_pred             CccCCCCCeEEEEEECCEEEEEec
Confidence            999999997765  5666655554

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-42  Score=283.98  Aligned_cols=222  Identities=18%  Similarity=0.148  Sum_probs=187.2

Q ss_pred             Cc-EEEEecCCCchHHHHHHHHHHc-CCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            5 AK-RVLLTSDGDEISKNIAFHLAKR-GCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         5 ~k-~vlItGa~~giG~~ia~~l~~~-g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      || ++|||||++|||+++|++|+++ |++|++++ +.+++++..+++++.   +.++.++.||+++.+  +++++++++.
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dvs~~~--sv~~~~~~~~   76 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE---GLSPRFHQLDIDDLQ--SIRALRDFLR   76 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT---TCCCEEEECCTTCHH--HHHHHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEEecCCHH--HHHHHHHHHH
Confidence            55 5599999999999999999987 89999999 788889999998766   468899999999999  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-------
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-------  154 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-------  154 (266)
                      +++|+||+||||||+. ...++.+.+.++|+.++++|+.+++++++.++|+|++   .|+||+++|..+..+.       
T Consensus        77 ~~~g~iDiLVnNAGi~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~---~g~ivnisS~~~~~~~~~~~~y~  152 (275)
T d1wmaa1          77 KEYGGLDVLVNNAGIA-FKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMSVRALKSCSPEL  152 (275)
T ss_dssp             HHHSSEEEEEECCCCC-CCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHHHHTSCHHH
T ss_pred             HhcCCcEEEEEcCCcC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCcccccccceeccccccchhh
Confidence            9999999999999984 5566677788999999999999999999999999965   5899999998664220       


Q ss_pred             --------------------------------CCCCchhhHHhHHHHHHHHHHHHHHhCC----CCcEEEEEecCcccCC
Q 024517          155 --------------------------------LYPGAAAYGACAASIHQLVRTAAMEIGK----HKIRVNGIARGLHLQD  198 (266)
Q Consensus       155 --------------------------------~~~~~~~y~~sK~a~~~~~~~la~e~~~----~~i~v~~v~pG~v~t~  198 (266)
                                                      ...+...|++||+++..|++.+++++++    .||+||+|+||+|+|+
T Consensus       153 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~  232 (275)
T d1wmaa1         153 QQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD  232 (275)
T ss_dssp             HHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCST
T ss_pred             hhhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCC
Confidence                                            0123457999999999999999998864    5899999999999999


Q ss_pred             CcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHc--cCCCCcccccEEEEcCC
Q 024517          199 EYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI--SDGSRYMTGTTIYVDGA  254 (266)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~--s~~~~~~~G~~i~~dgG  254 (266)
                      +.....                 ..+|+ |+|+.+++++  ++.....+|+.+. |.+
T Consensus       233 m~~~~~-----------------~~~pe-e~A~~~~~~a~~~~~~~~~~G~~~~-~~~  271 (275)
T d1wmaa1         233 MAGPKA-----------------TKSPE-EGAETPVYLALLPPDAEGPHGQFVS-EKR  271 (275)
T ss_dssp             TTCTTC-----------------SBCHH-HHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             cccCcc-----------------cCCHH-HHHHHHHHHHcCChhhcCCCeEEEE-CCE
Confidence            875421                 12455 9999999986  4566788999886 543

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.5e-40  Score=272.65  Aligned_cols=226  Identities=15%  Similarity=0.153  Sum_probs=181.0

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |+.|+||||||++|||+++|++|+++|+  +|++++ +.++++++.+    ..  +.++.++.||+++.+  ++++++++
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~----~~--~~~~~~~~~Dvs~~~--~v~~~~~~   72 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----IK--DSRVHVLPLTVTCDK--SLDTFVSK   72 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----CC--CTTEEEEECCTTCHH--HHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH----hh--CCceEEEEEecCCHH--HHHHHHHH
Confidence            3479999999999999999999999997  577777 5566665432    22  358999999999998  99999999


Q ss_pred             HHHHhCC--CCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccC----------CCCeEEEEec
Q 024517           80 ACQILGN--LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK----------AGGSIVFLTS  147 (266)
Q Consensus        80 ~~~~~g~--id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----------~~g~iv~iss  147 (266)
                      +.+.++.  ||++|||||+..+..++.+.+.++|++.+++|+.+++.+++.++|+|++++          ..+.++++++
T Consensus        73 i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~  152 (250)
T d1yo6a1          73 VGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISS  152 (250)
T ss_dssp             HHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECC
T ss_pred             HHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccc
Confidence            9998764  999999999866667888899999999999999999999999999997642          1378999988


Q ss_pred             ccccccCC-----CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCC
Q 024517          148 IIGAERGL-----YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRW  222 (266)
Q Consensus       148 ~~~~~~~~-----~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  222 (266)
                      ........     ..+..+|++||+|+.+|+++++.|+++.||+||+|+||+|+|+|.....                 .
T Consensus       153 ~~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~~-----------------~  215 (250)
T d1yo6a1         153 GLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNA-----------------A  215 (250)
T ss_dssp             GGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------------
T ss_pred             ccccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCCC-----------------C
Confidence            76654321     2345679999999999999999999999999999999999999864311                 1


Q ss_pred             CCChhhHHHHHHHHccCCCCcccccEEEEcCC
Q 024517          223 LDVKNDLASTVIYLISDGSRYMTGTTIYVDGA  254 (266)
Q Consensus       223 ~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG  254 (266)
                      .+|+ |.++.++..+.......+|++|..||-
T Consensus       216 ~~~e-~~a~~~~~~~~~~~~~~sG~f~~~~g~  246 (250)
T d1yo6a1         216 LTVE-QSTAELISSFNKLDNSHNGRFFMRNLK  246 (250)
T ss_dssp             ---H-HHHHHHHHHHTTCCGGGTTCEEETTEE
T ss_pred             CCHH-HHHHHHHHHHhcCCCCCCeEEECCCCe
Confidence            3455 889999898887667789999988864

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-39  Score=269.41  Aligned_cols=216  Identities=22%  Similarity=0.256  Sum_probs=184.9

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      |+||++|||||++|||+++|++|+++|++|++++ +.++++++.+++....  +.....+.+|+++.+  ++...++++.
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~--~~~~~~~~~d~~~~~--~~~~~~~~~~   87 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG--AASAHYIAGTMEDMT--FAEQFVAQAG   87 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT--CSEEEEEECCTTCHH--HHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhh--cccchhhhhhhhhHH--HHHHHHHHHH
Confidence            7999999999999999999999999999999999 7788888887776553  357888999999988  9999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchh
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA  161 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  161 (266)
                      +.++.+|+++||||. ....++.+.+.++|++++++|+.+++.+++.++|+|++.  +|+||+|||.++..+  .++...
T Consensus        88 ~~~g~~~~li~nag~-~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~--~G~ii~isS~~~~~~--~p~~~~  162 (269)
T d1xu9a_          88 KLMGGLDMLILNHIT-NTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGKVA--YPMVAA  162 (269)
T ss_dssp             HHHTSCSEEEECCCC-CCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGTSC--CTTCHH
T ss_pred             HHhCCcccccccccc-ccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc--CCcceEeccchhcCC--CCCchH
Confidence            999999999999998 466778889999999999999999999999999999764  499999999999877  799999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCC--CCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          162 YGACAASIHQLVRTAAMEIGK--HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       162 y~~sK~a~~~~~~~la~e~~~--~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      |++||+|+++|+++|+.|+++  .||+||+|+||+|+|++........          +.....++ +++|+.+.....
T Consensus       163 Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~~----------~~~~~~~~-e~~a~~i~~~~~  230 (269)
T d1xu9a_         163 YSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGI----------VHMQAAPK-EECALEIIKGGA  230 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG----------GGGGCBCH-HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccCC----------ccccCCCH-HHHHHHHHHHhh
Confidence            999999999999999999974  4799999999999999865432111          01111233 488888877554

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2e-39  Score=263.51  Aligned_cols=223  Identities=12%  Similarity=0.100  Sum_probs=177.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH-
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI-   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~-   83 (266)
                      +++||||||++|||+++|++|+++|++|+++++.+...            ......+.+|+++.+  +.....+.+... 
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~   67 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------------ADSNILVDGNKNWTE--QEQSILEQTASSL   67 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------------SSEEEECCTTSCHHH--HHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc------------ccccceeccccCchh--HHHHHHHHHHHHh
Confidence            45679999999999999999999999999999433211            123445556777766  666666666653 


Q ss_pred             -hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhh
Q 024517           84 -LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY  162 (266)
Q Consensus        84 -~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y  162 (266)
                       +++||+||||||......++.+.+.++|+.++++|+.+++.++|.++|+|++   +|+|+++||..+..+  .+++.+|
T Consensus        68 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~g~Iv~isS~~~~~~--~~~~~~Y  142 (235)
T d1ooea_          68 QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAAAAMGP--TPSMIGY  142 (235)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSC--CTTBHHH
T ss_pred             cCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc---ceEEEEeccHHhcCC--cccccch
Confidence             5889999999998655556666677899999999999999999999999965   589999999998887  6899999


Q ss_pred             HHhHHHHHHHHHHHHHHhC--CCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHH-HccC
Q 024517          163 GACAASIHQLVRTAAMEIG--KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY-LISD  239 (266)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~-l~s~  239 (266)
                      +++|+|+++|+++++.|++  +.+|+||+|+||+++|++.+....          ..+..++.+|+ ++++.+++ +.++
T Consensus       143 ~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~----------~~~~~~~~~~~-~va~~~~~~l~~~  211 (235)
T d1ooea_         143 GMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP----------NADHSSWTPLS-FISEHLLKWTTET  211 (235)
T ss_dssp             HHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST----------TCCGGGCBCHH-HHHHHHHHHHHCG
T ss_pred             HHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCc----------CCccccCCCHH-HHHHHHHHHhcCc
Confidence            9999999999999999998  468999999999999987654321          12223445555 99999875 5556


Q ss_pred             CCCcccccEEEE---cCCccc
Q 024517          240 GSRYMTGTTIYV---DGAQSI  257 (266)
Q Consensus       240 ~~~~~~G~~i~~---dgG~~~  257 (266)
                      ..++++|+.+.+   ||+.++
T Consensus       212 ~~~~~tG~~i~v~~~~g~~~~  232 (235)
T d1ooea_         212 SSRPSSGALLKITTENGTSTI  232 (235)
T ss_dssp             GGCCCTTCEEEEEEETTEEEE
T ss_pred             cccCCCceEEEEEeeCCEEEE
Confidence            677899999988   454433

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=7e-39  Score=263.65  Aligned_cols=218  Identities=19%  Similarity=0.292  Sum_probs=162.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH-
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI-   83 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~-   83 (266)
                      |++|||||++|||+++|++|+++|++|++++ +.++                    ..+|+.+.+  ..+....++... 
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~--------------------~~~d~~~~~--~~~~~~~~~~~~~   59 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE--------------------VIADLSTAE--GRKQAIADVLAKC   59 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS--------------------EECCTTSHH--HHHHHHHHHHTTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH--------------------HHHHhcCHH--HHHHHHHHHHHHh
Confidence            7899999999999999999999999999999 4321                    235888877  777776665544 


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc---------------
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI---------------  148 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~---------------  148 (266)
                      .+.+|+++||||.. .       ..+.+.....+|..+...+.+...+.+.+.. ...+.++.+.               
T Consensus        60 ~~~id~lv~~Ag~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  130 (257)
T d1fjha_          60 SKGMDGLVLCAGLG-P-------QTKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALA  130 (257)
T ss_dssp             TTCCSEEEECCCCC-T-------TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHH
T ss_pred             CCCCcEEEEcCCCC-C-------cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCcceeeeeccccchhhhhhhhhhh
Confidence            46799999999873 2       2234788899999999999999999887654 3444444443               


Q ss_pred             ------------cccccCCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHH-hh
Q 024517          149 ------------IGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV-RE  215 (266)
Q Consensus       149 ------------~~~~~~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~-~~  215 (266)
                                  .+..+. .++..+|+++|+|+++|+|+++.||+++|||||+|+||+|+||+......+++..+.. ..
T Consensus       131 ~~~g~~~~i~s~~~~~~~-~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~  209 (257)
T d1fjha_         131 LEAGEEAKARAIVEHAGE-QGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKF  209 (257)
T ss_dssp             HHHTCHHHHHHHHHTCCT-THHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------C
T ss_pred             ccCCcEEEEeeehhccCC-CcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhc
Confidence                        222221 2345679999999999999999999999999999999999999987766555444443 34


Q ss_pred             ccCCCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCcc
Q 024517          216 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       216 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      ..|++|+++|+ |+|+.+.||+|+.++++|||+|.+|||++
T Consensus       210 ~~PlgR~g~p~-eva~~v~fL~S~~s~~itG~~i~vDGG~t  249 (257)
T d1fjha_         210 VPPMGRRAEPS-EMASVIAFLMSPAASYVHGAQIVIDGGID  249 (257)
T ss_dssp             CCSTTSCCCTH-HHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             CCCCCCCcCHH-HHHHHHHHHhCchhCCccCceEEeCCCcc
Confidence            57999999998 99999999999999999999999999986

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=1.7e-30  Score=213.55  Aligned_cols=224  Identities=15%  Similarity=0.143  Sum_probs=167.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEecc----cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNE----RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      .++++|||||++|||+++|++|+++|+ +|++++|.    +..++..+++...   +.++.++.||++|.+  +++++++
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~---g~~v~~~~~Dv~d~~--~~~~~~~   82 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL---GARTTVAACDVTDRE--SVRELLG   82 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT---TCEEEEEECCTTCHH--HHHHHHH
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc---cccccccccccchHH--HHHHhhc
Confidence            467999999999999999999999999 57777743    3445555555443   578999999999998  9999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCC
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG  158 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  158 (266)
                      ++.+. +++|.++||+|. ....++.+.+.++|+..+++|+.+++++.+.+    ...+ .+.||++||..+..+  .++
T Consensus        83 ~i~~~-~~i~~vv~~ag~-~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~-~~~iv~~SS~a~~~g--~~~  153 (259)
T d2fr1a1          83 GIGDD-VPLSAVFHAAAT-LDDGTVDTLTGERIERASRAKVLGARNLHELT----RELD-LTAFVLFSSFASAFG--APG  153 (259)
T ss_dssp             TSCTT-SCEEEEEECCCC-CCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSC-CSEEEEEEEHHHHTC--CTT
T ss_pred             ccccc-cccccccccccc-ccccccccccHHHHHHHhhhhccchhHHHHHh----hccC-CceEeeecchhhccC--Ccc
Confidence            87654 589999999998 46678889999999999999999999887753    3333 689999999999887  689


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHcc
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS  238 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (266)
                      ...|+++|++++.|++.++.    .|+++++|+||.+.++.+....    ....+ ..... ...+++ ++++.+..+++
T Consensus       154 ~~~YaAaka~l~~la~~~~~----~Gi~v~~I~pg~~~~~g~~~~~----~~~~~-~~~G~-~~~~~~-~~~~~l~~~l~  222 (259)
T d2fr1a1         154 LGGYAPGNAYLDGLAQQRRS----DGLPATAVAWGTWAGSGMAEGP----VADRF-RRHGV-IEMPPE-TACRALQNALD  222 (259)
T ss_dssp             CTTTHHHHHHHHHHHHHHHH----TTCCCEEEEECCBC----------------C-TTTTE-ECBCHH-HHHHHHHHHHH
T ss_pred             cHHHHHHHHhHHHHHHHHHh----CCCCEEECCCCcccCCccccch----HHHHH-HhcCC-CCCCHH-HHHHHHHHHHh
Confidence            99999999999988876654    5899999999999765443211    11111 11111 123454 99999999886


Q ss_pred             CCCCcccccEEEEcCC
Q 024517          239 DGSRYMTGTTIYVDGA  254 (266)
Q Consensus       239 ~~~~~~~G~~i~~dgG  254 (266)
                      ..  ......+.+|..
T Consensus       223 ~~--~~~~~v~~~d~~  236 (259)
T d2fr1a1         223 RA--EVCPIVIDVRWD  236 (259)
T ss_dssp             TT--CSSCEECEECHH
T ss_pred             CC--CceEEEEeCcHH
Confidence            53  234445566643

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=5.4e-19  Score=150.73  Aligned_cols=229  Identities=7%  Similarity=-0.005  Sum_probs=154.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEeccc------ccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNER------RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      .|+||||||+|.||++++++|+++|++|+.++|..      +.+......   .....++.++.+|++|.+  +++++++
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~--~~~~~~~   75 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDP---HTCNPKFHLHYGDLSDTS--NLTRILR   75 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC------------------------CCEEECCCCSSCHH--HHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhh---hhcCCCeEEEEeecCCHH--HHHHHHh
Confidence            48999999999999999999999999999988422      111111111   111358999999999998  9888887


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc-----
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER-----  153 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~-----  153 (266)
                      ..     .+|+++|+|+......     ..++.+..+++|+.++.++++++...-.+.  ..++|++||..-...     
T Consensus        76 ~~-----~~d~v~h~aa~~~~~~-----~~~~~~~~~~~Nv~gt~nllea~~~~~~~~--~~r~i~~SS~~vYG~~~~~~  143 (357)
T d1db3a_          76 EV-----QPDEVYNLGAMSHVAV-----SFESPEYTADVDAMGTLRLLEAIRFLGLEK--KTRFYQASTSELYGLVQEIP  143 (357)
T ss_dssp             HH-----CCSEEEECCCCCTTTT-----TTSCHHHHHHHHTHHHHHHHHHHHHTTCTT--TCEEEEEEEGGGGTTCCSSS
T ss_pred             cc-----CCCEEEEeecccccch-----hhhCHHHHHHHHHHHHHHHHHHHHHhCCCC--CcEEEEEEchhhhCCCCCCC
Confidence            65     6899999998743322     224456788999999999999886542221  357999998643211     


Q ss_pred             ----CCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHH----hhccCC-----C
Q 024517          154 ----GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV----REAAPL-----H  220 (266)
Q Consensus       154 ----~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~----~~~~~~-----~  220 (266)
                          .+..+...|+.+|.+.+.+++.+++.+   ++++..+.|+.+.+|..............+    ....+.     +
T Consensus       144 ~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~  220 (357)
T d1db3a_         144 QKETTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNM  220 (357)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCT
T ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCC
Confidence                012246689999999999999998874   688899999998888543322222221111    111111     0


Q ss_pred             ----CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          221 ----RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       221 ----~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                          .+... +|+++++..++..    -.|+.+++..|..++
T Consensus       221 ~~~r~~~~v-~D~~~a~~~~~~~----~~~~~yni~sg~~~s  257 (357)
T d1db3a_         221 DSLRDWGHA-KDYVKMQWMMLQQ----EQPEDFVIATGVQYS  257 (357)
T ss_dssp             TCEECCEEH-HHHHHHHHHTTSS----SSCCCEEECCCCCEE
T ss_pred             Ceeecceee-chHHHHHHHHHhC----CCCCeEEECCCCcee
Confidence                12223 4999999887754    256788887776654

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.80  E-value=1.9e-21  Score=151.71  Aligned_cols=152  Identities=16%  Similarity=0.115  Sum_probs=112.6

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +|+||++|||||++|||+++|++|+++|++|++++ +.+++++..+++...    .++.+..+|+++.+  ++++.+   
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~--~~~~~~---   90 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR----FKVNVTAAETADDA--SRAEAV---   90 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH----HTCCCEEEECCSHH--HHHHHT---
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc----cchhhhhhhcccHH--HHHHHh---
Confidence            68999999999999999999999999999999999 778888888888765    35567889999987  766554   


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                          +++|+||||||. +    +...+.++|+..+++|+.+.++....+.+.+....  .....+++....... ..+..
T Consensus        91 ----~~iDilin~Ag~-g----~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~-~~g~~  158 (191)
T d1luaa1          91 ----KGAHFVFTAGAI-G----LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT--DKGKEYGGKRAFGAL-GIGGL  158 (191)
T ss_dssp             ----TTCSEEEECCCT-T----CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT--CEEEEETTEEEECHH-HHHHH
T ss_pred             ----cCcCeeeecCcc-c----cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc--cCcEEecceEEEecc-CcCcH
Confidence                689999999986 2    23468899999999999888876655544333322  222233322221110 12345


Q ss_pred             hhHHhHHHHHHHHH
Q 024517          161 AYGACAASIHQLVR  174 (266)
Q Consensus       161 ~y~~sK~a~~~~~~  174 (266)
                      .|+++|+++..|++
T Consensus       159 ~y~~sk~a~~~l~~  172 (191)
T d1luaa1         159 KLKLHRACIAKLFE  172 (191)
T ss_dssp             HHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHh
Confidence            79999999887764

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.76  E-value=8.1e-18  Score=143.58  Aligned_cols=232  Identities=16%  Similarity=0.138  Sum_probs=156.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEE-EecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVL-VGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      +||||||+|.||++++++|++.|+.|++ +++...... .+.+... ....++.++.+|++|.+  .++++++..     
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~-~~~~~~~-~~~~~~~~~~~Dl~d~~--~l~~~~~~~-----   72 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN-LESLSDI-SESNRYNFEHADICDSA--EITRIFEQY-----   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC-GGGGTTT-TTCTTEEEEECCTTCHH--HHHHHHHHH-----
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc-HHHHHhh-hhcCCcEEEEccCCCHH--HHHHHHHhC-----
Confidence            4899999999999999999999997554 443211110 1112211 22368999999999998  888877653     


Q ss_pred             CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhcc----CCCCeEEEEecccccccC-------
Q 024517           86 NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES----KAGGSIVFLTSIIGAERG-------  154 (266)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~g~iv~iss~~~~~~~-------  154 (266)
                      ++|+|||+|+....     ..+.++....+++|+.++..+++.+.......    ....++|++||.......       
T Consensus        73 ~~d~VihlAa~~~~-----~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~  147 (361)
T d1kewa_          73 QPDAVMHLAAESHV-----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVE  147 (361)
T ss_dssp             CCSEEEECCSCCCH-----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSC
T ss_pred             CCCEEEECccccch-----hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccc
Confidence            79999999976321     12233446789999999999999998764321    013589999997644211       


Q ss_pred             ------------CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCC-
Q 024517          155 ------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHR-  221 (266)
Q Consensus       155 ------------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-  221 (266)
                                  +..+...|+.+|.+.+.+++.++..+   ++++..+.|+.+..|.......-..+........|..- 
T Consensus       148 ~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~  224 (361)
T d1kewa_         148 NSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIY  224 (361)
T ss_dssp             TTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEE
T ss_pred             cccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEe
Confidence                        01234569999999999999998874   68899999999988754321111223333333323211 


Q ss_pred             --------CCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccC
Q 024517          222 --------WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       222 --------~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                              +... +|+++++..++...   ..|+.+++.+|...+.
T Consensus       225 g~g~~~r~~i~v-~D~a~ai~~~~~~~---~~~~~~Ni~s~~~~s~  266 (361)
T d1kewa_         225 GKGDQIRDWLYV-EDHARALHMVVTEG---KAGETYNIGGHNEKKN  266 (361)
T ss_dssp             TTSCCEEEEEEH-HHHHHHHHHHHHHC---CTTCEEEECCCCEEEH
T ss_pred             CCCCeEEeCEEH-HHHHHHHHHHHhcC---CCCCeEEECCCCCcch
Confidence                    2233 49999999988653   3477899987765543

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.72  E-value=5.7e-16  Score=133.27  Aligned_cols=178  Identities=13%  Similarity=0.095  Sum_probs=127.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEeccc-----------------ccHHHHHHHhcccCCCCCeEEEEEecCC
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNER-----------------RLSSVAEKMMGSLKGGQPVEVVGLDMEE   67 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~   67 (266)
                      |++||||||+|.||.+++++|+++|++|+++|+-.                 ...+.........  +.++.++.+|++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~Dl~d   78 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT--GKSIELYVGDICD   78 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH--CCCCEEEESCTTS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhc--CCCcEEEEccCCC
Confidence            68999999999999999999999999999986211                 1111112221111  3578999999999


Q ss_pred             CchHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEec
Q 024517           68 DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTS  147 (266)
Q Consensus        68 ~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss  147 (266)
                      .+  .++++++..     ++|+|+|.|+...  .+....+.+.....+++|+.++.++++.+...-.    ...+++.||
T Consensus        79 ~~--~l~~~~~~~-----~~d~ViHlAa~~~--~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~----~~~~i~~ss  145 (393)
T d1i24a_          79 FE--FLAESFKSF-----EPDSVVHFGEQRS--APYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE----ECHLVKLGT  145 (393)
T ss_dssp             HH--HHHHHHHHH-----CCSEEEECCSCCC--HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT----TCEEEEECC
T ss_pred             HH--HHHHHHHhh-----cchheeccccccc--cccccccccccccccccccccccHHHHHHHHhcc----ccceeeccc
Confidence            98  888888764     7999999997632  1222345566778899999999999998865422    245666666


Q ss_pred             ccccccC----------------------CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCc
Q 024517          148 IIGAERG----------------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY  200 (266)
Q Consensus       148 ~~~~~~~----------------------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~  200 (266)
                      .......                      +..+...|+.+|.+.+.+++.+.+++   ++++..+.|+.+..+..
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~~~  217 (393)
T d1i24a_         146 MGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKT  217 (393)
T ss_dssp             GGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCC
T ss_pred             cccccccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCCCc
Confidence            5432110                      01233579999999999999888774   68888999888887643

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.72  E-value=4.8e-17  Score=137.62  Aligned_cols=224  Identities=12%  Similarity=0.107  Sum_probs=145.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .||+||||||+|.||.+++++|+++|++|+.+. +..+...+....... ........+..|+++.+  ++..++     
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~--~~~~~~-----   81 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK-YPGRFETAVVEDMLKQG--AYDEVI-----   81 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-STTTEEEEECSCTTSTT--TTTTTT-----
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhcc-ccccccEEEeccccchh--hhhhhc-----
Confidence            589999999999999999999999999999887 433333333222212 11234556778999988  655554     


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC-------
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL-------  155 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~-------  155 (266)
                        ..+|+++|+++....     ..+   ....+..|+.++.++++.+...    +.-.++|++||..+.....       
T Consensus        82 --~~~~~v~~~a~~~~~-----~~~---~~~~~~~nv~gt~~ll~~~~~~----~~v~~~i~~SS~~~~~~~~~~~~~~~  147 (342)
T d1y1pa1          82 --KGAAGVAHIASVVSF-----SNK---YDEVVTPAIGGTLNALRAAAAT----PSVKRFVLTSSTVSALIPKPNVEGIY  147 (342)
T ss_dssp             --TTCSEEEECCCCCSC-----CSC---HHHHHHHHHHHHHHHHHHHHTC----TTCCEEEEECCGGGTCCCCTTCCCCE
T ss_pred             --ccchhhhhhcccccc-----ccc---ccccccchhhhHHHHHHhhhcc----cccccccccccceeeccCCCCCCCcc
Confidence              368999999876321     122   3456778999988888887543    1136899999975432110       


Q ss_pred             ----------------------CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc---HHHH
Q 024517          156 ----------------------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ---ERAV  210 (266)
Q Consensus       156 ----------------------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~---~~~~  210 (266)
                                            ......|+.+|.+.+.+++.+.+.+. .++++..|+|+.+..|........   ..+.
T Consensus       148 ~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~  226 (342)
T d1y1pa1         148 LDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTIFDPETQSGSTSGWM  226 (342)
T ss_dssp             ECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCCSCTTTCCCHHHHHH
T ss_pred             ccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCCCCccccccchHHHH
Confidence                                  11234699999999999999988875 468999999998887754332211   1111


Q ss_pred             HHHhh--------ccCCCCCCCChhhHHHHHHHHccCCCCcccccEEEEcC
Q 024517          211 KLVRE--------AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG  253 (266)
Q Consensus       211 ~~~~~--------~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg  253 (266)
                      ..+..        ..+...+..+. |+|++++..+..  ....|+.+...+
T Consensus       227 ~~l~~g~~~~~~~~~~~~~~v~v~-Dva~~~i~~l~~--~~~~g~~~~~~~  274 (342)
T d1y1pa1         227 MSLFNGEVSPALALMPPQYYVSAV-DIGLLHLGCLVL--PQIERRRVYGTA  274 (342)
T ss_dssp             HHHHTTCCCHHHHTCCSEEEEEHH-HHHHHHHHHHHC--TTCCSCEEEECC
T ss_pred             HHHHcCCcCcccCCccceeeeeHH-HHHHHHHHhhcC--ccccceEEEEcC
Confidence            11111        11111234455 999998777654  235666664433

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=2.6e-16  Score=132.85  Aligned_cols=229  Identities=13%  Similarity=0.118  Sum_probs=152.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecc-cccH---HHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-RRLS---SVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++|||||+|.||++++++|+++|++|+++++. ...+   ...+.+.     ..++.++.+|++|.+  .+.++++.   
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~--~l~~~~~~---   71 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-----GKHPTFVEGDIRNEA--LMTEILHD---   71 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-----TSCCEEEECCTTCHH--HHHHHHHH---
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc-----CCCCEEEEeecCCHH--HHHHHHhc---
Confidence            49999999999999999999999999998732 1111   2222222     258899999999988  88777765   


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC--------
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG--------  154 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~--------  154 (266)
                        .++|+|||+|+....     ..+.++....+++|+.++..+++++...-     -.++|++||.......        
T Consensus        72 --~~~d~ViHlAa~~~~-----~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~-----v~~~i~~Ss~~vy~~~~~~~~~e~  139 (338)
T d1udca_          72 --HAIDTVIHFAGLKAV-----GESVQKPLEYYDNNVNGTLRLISAMRAAN-----VKNFIFSSSATVYGDQPKIPYVES  139 (338)
T ss_dssp             --TTCSEEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHHT-----CCEEEEEEEGGGGCSCCSSSBCTT
T ss_pred             --cCCCEEEECCCccch-----hhHHhCHHHHHHhHHHHHHHHHHHHHHhC-----CCEEEecCcceEEccccccccccc
Confidence              369999999986211     12334567889999999999999886642     3588898887654221        


Q ss_pred             --CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc------cH----HHHHHHh-hccCCC-
Q 024517          155 --LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG------QE----RAVKLVR-EAAPLH-  220 (266)
Q Consensus       155 --~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~------~~----~~~~~~~-~~~~~~-  220 (266)
                        ...+...|+.+|.+.+.+++....++  .++.+..+.|+.+.++.......      ..    ....... ...|.. 
T Consensus       140 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i  217 (338)
T d1udca_         140 FPTGTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAI  217 (338)
T ss_dssp             SCCCCCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEE
T ss_pred             cccCCCcchHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEE
Confidence              12357789999999999999887774  36788888888887764322111      11    1111111 111110 


Q ss_pred             --------------CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCC
Q 024517          221 --------------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       221 --------------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                                    .+.... |+++++..+.........++.+++.++..++..
T Consensus       218 ~g~~~~~~~g~~~rd~i~v~-D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~  270 (338)
T d1udca_         218 FGNDYPTEDGTGVRDYIHVM-DLADGHVVAMEKLANKPGVHIYNLGAGVGNSVL  270 (338)
T ss_dssp             ECSCSSSTTSSCEECEEEHH-HHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHH
T ss_pred             eCCCcccCCCCceeeEEEEe-ehhhhccccccccccccCcceeeecCCCCCcHH
Confidence                          012233 888776665543344567788999887766543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=7.4e-16  Score=128.63  Aligned_cols=218  Identities=15%  Similarity=0.137  Sum_probs=141.5

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-c-cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-E-RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|+||||||+|.||++++++|+++|++|+++++ . .+.+... ...    ...++.+...|+.+..             
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~-~~~----~~~~~d~~~~~~~~~~-------------   62 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE-HWI----GHENFELINHDVVEPL-------------   62 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTG-GGT----TCTTEEEEECCTTSCC-------------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHH-Hhc----CCCceEEEehHHHHHH-------------
Confidence            478999999999999999999999999999872 2 2222211 111    1134444443333222             


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC--------
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG--------  154 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~--------  154 (266)
                       +.++|+|||+|+.....     ...++....+++|+.++..+++++...      +.++|++||.+.....        
T Consensus        63 -~~~~d~VihlAa~~~~~-----~~~~~~~~~~~~Nv~g~~~ll~~~~~~------~~k~I~~SS~~vy~~~~~~~~~e~  130 (312)
T d2b69a1          63 -YIEVDQIYHLASPASPP-----NYMYNPIKTLKTNTIGTLNMLGLAKRV------GARLLLASTSEVYGDPEVHPQSED  130 (312)
T ss_dssp             -CCCCSEEEECCSCCSHH-----HHTTCHHHHHHHHHHHHHHHHHHHHHH------TCEEEEEEEGGGGBSCSSSSBCTT
T ss_pred             -HcCCCEEEECcccCCch-----hHHhCHHHHHHHHHHHHHHHHHHHHHc------CCcEEEEEChheecCCCCCCCCcc
Confidence             23699999999863211     111345677899999999999877432      2589999986543211        


Q ss_pred             ------CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--cHHHHHHHhhccCCC------
Q 024517          155 ------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKLVREAAPLH------  220 (266)
Q Consensus       155 ------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~------  220 (266)
                            +..+...|+.+|.+.+.+++..++.+   |+++..+.|+.|..|.......  -..+........+..      
T Consensus       131 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~  207 (312)
T d2b69a1         131 YWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGS  207 (312)
T ss_dssp             CCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSC
T ss_pred             ccCCCCCCCCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCC
Confidence                  11246789999999999999998874   6899999999999876543211  112222222222211      


Q ss_pred             ---CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCC
Q 024517          221 ---RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       221 ---~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                         .+... +|+++++..++...    .+..+++.+|..++..
T Consensus       208 ~~r~~i~v-~D~~~~~~~~~~~~----~~~~~n~~~~~~~~~~  245 (312)
T d2b69a1         208 QTRAFQYV-SDLVNGLVALMNSN----VSSPVNLGNPEEHTIL  245 (312)
T ss_dssp             CEEECEEH-HHHHHHHHHHHTSS----CCSCEEESCCCEEEHH
T ss_pred             eeEccEEH-HHHHHHHHHHHhhc----cCCceEecCCcccchh
Confidence               12223 49999998888542    3556888888776543

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.67  E-value=1.1e-15  Score=128.59  Aligned_cols=218  Identities=10%  Similarity=-0.007  Sum_probs=144.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEecc-c-----ccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-R-----RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      .|++|||||+|.||++++++|+++|++|+.+++. .     +...+.......  ....+.++.+|+++.+  ++.+.++
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Di~~~~--~~~~~~~   76 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV--NKALMKLHYADLTDAS--SLRRWID   76 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHH--HHHHHHH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhc--cccceEEEEccccCHH--HHHHHHh
Confidence            4899999999999999999999999999998842 1     111111111110  1257889999999988  8888877


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC----
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG----  154 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~----  154 (266)
                      ..     ++|+++|+|+....     ....++....++.|+.+...+..++.....+.....++++.||.......    
T Consensus        77 ~~-----~~D~Vih~Aa~~~~-----~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~  146 (339)
T d1n7ha_          77 VI-----KPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQ  146 (339)
T ss_dssp             HH-----CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSB
T ss_pred             hh-----ccchhhhccccccc-----cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCC
Confidence            53     79999999986322     12234567788999999999998887765443323455555554322111    


Q ss_pred             ----CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHH----HHHhhccCCC------
Q 024517          155 ----LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV----KLVREAAPLH------  220 (266)
Q Consensus       155 ----~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~----~~~~~~~~~~------  220 (266)
                          +..+...|+.+|.+.+.+++...+.+   ++++..+.|+.|..|............    .......+.-      
T Consensus       147 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~  223 (339)
T d1n7ha_         147 SETTPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQ  223 (339)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTT
T ss_pred             CCCCCCCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCC
Confidence                12346789999999999999988874   689999999999887644322211111    1111111110      


Q ss_pred             ---CCCCChhhHHHHHHHHccCC
Q 024517          221 ---RWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       221 ---~~~~~~~dva~~~~~l~s~~  240 (266)
                         .+... +|+++++..++...
T Consensus       224 ~~rd~~~v-~D~a~~~~~~~~~~  245 (339)
T d1n7ha_         224 ASRDWGFA-GDYVEAMWLMLQQE  245 (339)
T ss_dssp             CEEECEEH-HHHHHHHHHHHTSS
T ss_pred             ccccceee-ehHHHHHHHHHhcC
Confidence               12233 49999999888653

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=1e-15  Score=129.10  Aligned_cols=217  Identities=10%  Similarity=0.076  Sum_probs=146.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      +||||||+|.||++++++|+++|+ +|+.++ +.+...+..        ...++.++.+|+++.+  ++.+.+.      
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~--------~~~~~~~i~~Di~~~~--~~~~~~~------   65 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDISIHS--EWIEYHV------   65 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT--------TCTTEEEEECCTTTCS--HHHHHHH------
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc--------cCCCeEEEECccCChH--HHHHHHH------
Confidence            489999999999999999999995 898887 433322211        1368999999999887  5544322      


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC---------
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL---------  155 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~---------  155 (266)
                      .++|+++|+|+.....     ...++....+.+|+.++.++++.+...      +.+.+++||........         
T Consensus        66 ~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~gt~~ll~~~~~~------~~~~~~~ss~~~~~~~~~~~~~~~~~  134 (342)
T d2blla1          66 KKCDVVLPLVAIATPI-----EYTRNPLRVFELDFEENLRIIRYCVKY------RKRIIFPSTSEVYGMCSDKYFDEDHS  134 (342)
T ss_dssp             HHCSEEEECBCCCCHH-----HHHHSHHHHHHHHTHHHHHHHHHHHHT------TCEEEEECCGGGGBTCCCSSBCTTTC
T ss_pred             hCCCcccccccccccc-----ccccCCccccccccccccccccccccc------cccccccccccccccccccccccccc
Confidence            1489999999873221     222344678999999999999997442      34667777655432210         


Q ss_pred             -------CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc--------cHHHHHHHhhccCCC
Q 024517          156 -------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--------QERAVKLVREAAPLH  220 (266)
Q Consensus       156 -------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~  220 (266)
                             ..+...|+.+|.+.+.+++..++.+   |+++..+.|..+..+.......        ...+........+..
T Consensus       135 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  211 (342)
T d2blla1         135 NLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIK  211 (342)
T ss_dssp             CCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEE
T ss_pred             cccccccCCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCcc
Confidence                   1234679999999999999998874   6888888888888764433221        112222222211111


Q ss_pred             ---------CCCCChhhHHHHHHHHccCCCCcccccEEEEcCC
Q 024517          221 ---------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA  254 (266)
Q Consensus       221 ---------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG  254 (266)
                               .+...+ |+++++..++........|+.+++.+|
T Consensus       212 ~~~~g~~~r~~i~v~-D~~~a~~~~~~~~~~~~~g~~~Nig~~  253 (342)
T d2blla1         212 LIDGGKQKRCFTDIR-DGIEALYRIIENAGNRCDGEIINIGNP  253 (342)
T ss_dssp             EGGGSCCEEECEEHH-HHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             ccCCCCeeeeecccc-cccceeeeehhhccccCCCeEEEEecc
Confidence                     133444 999999999876555667999999654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.67  E-value=2.5e-15  Score=125.52  Aligned_cols=225  Identities=11%  Similarity=0.001  Sum_probs=147.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEecccc--cHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERR--LSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      |+||||||+|.||++++++|+++|++|+.+++...  ..+..+.+..    ..++.++.+|++|.+  ++.+.+...   
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~----~~~~~~~~~Dl~d~~--~~~~~~~~~---   71 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGI----EGDIQYEDGDMADAC--SVQRAVIKA---   71 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTC----GGGEEEEECCTTCHH--HHHHHHHHH---
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcc----cCCcEEEEccccChH--Hhhhhhccc---
Confidence            78999999999999999999999999999883222  1122223221    247899999999988  777777664   


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---------
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---------  154 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------  154 (266)
                        ..++++|+++.... .    ...++....+..|+.++.+++.++...-.    ..++++.||. ...+.         
T Consensus        72 --~~~~~~~~a~~~~~-~----~~~~~~~~~~~~n~~g~~~~l~~~~~~~~----~~~~i~~Ss~-~~~~~~~~~~~~E~  139 (321)
T d1rpna_          72 --QPQEVYNLAAQSFV-G----ASWNQPVTTGVVDGLGVTHLLEAIRQFSP----ETRFYQASTS-EMFGLIQAERQDEN  139 (321)
T ss_dssp             --CCSEEEECCSCCCH-H----HHTTSHHHHHHHHTHHHHHHHHHHHHHCT----TSEEEEEEEG-GGGCSCSSSSBCTT
T ss_pred             --cccccccccccccc-c----ccccchHHHHhhhhhchHHHHHHHHHhCC----Ccccccccch-hhcCcccCCCCCCC
Confidence              57888888765211 1    11133577889999999999888755421    2456666654 33321         


Q ss_pred             -CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHH----HHHHHhhccCC---C------
Q 024517          155 -LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQER----AVKLVREAAPL---H------  220 (266)
Q Consensus       155 -~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~----~~~~~~~~~~~---~------  220 (266)
                       +..+...|+.+|.+.+.+++.+..++   ++++..+.|+.+..|..........    ..+......+.   +      
T Consensus       140 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r  216 (321)
T d1rpna_         140 TPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKR  216 (321)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEE
T ss_pred             CCccccChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEE
Confidence             12356889999999999999998874   5888888888887775433211111    11111111111   1      


Q ss_pred             CCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccC
Q 024517          221 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       221 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      .+... +|+++++..++...    .+..+.+.+|...+.
T Consensus       217 ~~i~v-~D~~~~~~~~~~~~----~~~~~ni~~~~~~s~  250 (321)
T d1rpna_         217 DWGFA-GDYVEAMWLMLQQD----KADDYVVATGVTTTV  250 (321)
T ss_dssp             ECEEH-HHHHHHHHHHHHSS----SCCCEEECCSCEEEH
T ss_pred             ccEEe-HHHHHHHHHHHhcC----CcCCceeccccccee
Confidence            12333 49999999988643    234566766655543

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.8e-15  Score=127.70  Aligned_cols=215  Identities=10%  Similarity=0.022  Sum_probs=140.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEec-cc-----ccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ER-----RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++|||||+|.||++++++|+++|++|+.+++ ..     +.+.+.......  ...++.++.+|++|.+  .+.++++.
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~--~~~~~~~~   77 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH--IEGNMKLHYGDLTDST--CLVKIINE   77 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC-----------CEEEEECCTTCHH--HHHHHHHH
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhh--ccCCcEEEEeecCCch--hhHHHHhh
Confidence            44599999999999999999999999999884 22     112111111111  1257899999999998  88888766


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc------
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER------  153 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~------  153 (266)
                      .     .+++++|+++....     ....++....+++|+.++.+++.++...-...  ..++|++||.+-...      
T Consensus        78 ~-----~~~~v~~~~a~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~--~~~~i~~SS~~vyg~~~~~~~  145 (347)
T d1t2aa_          78 V-----KPTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVKTCGLIN--SVKFYQASTSELYGKVQEIPQ  145 (347)
T ss_dssp             H-----CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT--TCEEEEEEEGGGTCSCSSSSB
T ss_pred             c-----ccceeeeeeecccc-----chhhccchhhhhhHHHHHHHHHHHHHHcCCCC--CcEEEEecchheecCCCCCCC
Confidence            4     68899998875321     12234456678999999999998886653221  358999998653211      


Q ss_pred             ---CCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHH----HHHHHhhccCCCC-----
Q 024517          154 ---GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQER----AVKLVREAAPLHR-----  221 (266)
Q Consensus       154 ---~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~----~~~~~~~~~~~~~-----  221 (266)
                         .+..+...|+.+|.+.+.+++.+.+.+   ++.+..+.|+.+..|..........    .........+...     
T Consensus       146 ~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~  222 (347)
T d1t2aa_         146 KETTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLD  222 (347)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTT
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCc
Confidence               012245679999999999999988774   6788888988887764332221111    1122222222211     


Q ss_pred             ----CCCChhhHHHHHHHHccCC
Q 024517          222 ----WLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       222 ----~~~~~~dva~~~~~l~s~~  240 (266)
                          +...+ |+++++..++...
T Consensus       223 ~~r~~i~v~-D~~~a~~~~~~~~  244 (347)
T d1t2aa_         223 AKRDWGHAK-DYVEAMWLMLQND  244 (347)
T ss_dssp             CEECCEEHH-HHHHHHHHHHHSS
T ss_pred             ceeeeeEec-HHHHHHHHHhhcC
Confidence                22334 9999999888653

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.67  E-value=1.3e-15  Score=128.89  Aligned_cols=172  Identities=14%  Similarity=0.123  Sum_probs=122.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEec--ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN--ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|+||||||+|.||++++++|+++|++|+++++  ....+..... ....  ..++.++.+|++|.+  +++++++..  
T Consensus         1 ~K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~-~~~~--~~~v~~~~~Dl~d~~--~l~~~~~~~--   73 (347)
T d1z45a2           1 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARL-EVLT--KHHIPFYEVDLCDRK--GLEKVFKEY--   73 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHH-HHHH--TSCCCEEECCTTCHH--HHHHHHHHS--
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhH-Hhhc--ccCCeEEEeecCCHH--HHHHHHhcc--
Confidence            489999999999999999999999999999873  2222222211 1111  257889999999988  888777642  


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC--------
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG--------  154 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~--------  154 (266)
                         ++|+++|+|+.....     ...++-.....+|+.++..+++++...-     -.+++++||.......        
T Consensus        74 ---~~d~VihlAa~~~~~-----~~~~~~~~~~~~N~~~t~~ll~~~~~~~-----i~~~i~~SS~~vyg~~~~~~~~~~  140 (347)
T d1z45a2          74 ---KIDSVIHFAGLKAVG-----ESTQIPLRYYHNNILGTVVLLELMQQYN-----VSKFVFSSSATVYGDATRFPNMIP  140 (347)
T ss_dssp             ---CCCEEEECCSCCCHH-----HHHHSHHHHHHHHHHHHHHHHHHHHHHT-----CCEEEEEEEGGGGCCGGGSTTCCS
T ss_pred             ---CCCEEEEcccccccc-----ccccCcccccccchhhhHHHHHHHHhcc-----cceEEeecceeeecCcccCCCCCc
Confidence               699999999863211     1223446778899999999999986532     2589999996554211        


Q ss_pred             -----CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccC
Q 024517          155 -----LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQ  197 (266)
Q Consensus       155 -----~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t  197 (266)
                           +..+...|+.+|.+.+.+++.+.+... .++++..+.|+.+..
T Consensus       141 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~lR~~~v~g  187 (347)
T d1z45a2         141 IPEECPLGPTNPYGHTKYAIENILNDLYNSDK-KSWKFAILRYFNPIG  187 (347)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHST-TSCEEEEEEECEEEC
T ss_pred             cccccCCCCCChhHhHHHHHHHHHHHHHHhhc-cCCcEEEEeecceEe
Confidence                 122456799999999999999876533 467777777665554

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=2.7e-15  Score=126.74  Aligned_cols=233  Identities=14%  Similarity=0.126  Sum_probs=153.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEec-------ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-------ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      |+||||||+|.||++++++|+++|++|+.+++       .....+..+.+....  ..++.++.+|++|.+  ++++++.
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~--~l~~~~~   78 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT--GRSVEFEEMDILDQG--ALQRLFK   78 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH--TCCCEEEECCTTCHH--HHHHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhc--CCCcEEEEeeccccc--ccccccc
Confidence            68899999999999999999999999998852       111222222222111  258899999999988  8777775


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC---
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL---  155 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~---  155 (266)
                      .     ..+++++|.|+....     ....++....+++|+.++..+++++...    + -.+++++||........   
T Consensus        79 ~-----~~~~~i~h~Aa~~~~-----~~~~~~p~~~~~~Nv~gt~~l~~~~~~~----~-v~~~i~~ss~~~~~~~~~~~  143 (346)
T d1ek6a_          79 K-----YSFMAVIHFAGLKAV-----GESVQKPLDYYRVNLTGTIQLLEIMKAH----G-VKNLVFSSSATVYGNPQYLP  143 (346)
T ss_dssp             H-----CCEEEEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEEEEGGGGCSCSSSS
T ss_pred             c-----cccccccccccccCc-----HhhHhCHHHHHHhhhcccccccchhhhc----C-cccccccccceeeecccccc
Confidence            5     478899999986321     1223445678899999999988887442    2 24788888875543321   


Q ss_pred             -------CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc------c----HHHHHHHh-hcc
Q 024517          156 -------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG------Q----ERAVKLVR-EAA  217 (266)
Q Consensus       156 -------~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~------~----~~~~~~~~-~~~  217 (266)
                             ......|+.+|...+..++.+++.  ..++....+.|+.+.++.......      .    ........ ...
T Consensus       144 ~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (346)
T d1ek6a_         144 LDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRRE  221 (346)
T ss_dssp             BCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSS
T ss_pred             ccccccccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCC
Confidence                   134557999999999999887664  346777778887776653221110      1    11111111 111


Q ss_pred             C---------C------CCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCC
Q 024517          218 P---------L------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       218 ~---------~------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                      +         .      ..+...+ |+|+++..++........++.+++.+|..++..
T Consensus       222 ~i~i~g~~~~~~~g~~~Rdfi~v~-D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~  278 (346)
T d1ek6a_         222 ALNVFGNDYDTEDGTGVRDYIHVV-DLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVL  278 (346)
T ss_dssp             CEEEECSCSSSSSSSCEECEEEHH-HHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHH
T ss_pred             cEEEcCCcccCCCCCeeEeEEEEE-eccchhhhhccccccccCceEEEeCCCCcccHH
Confidence            1         0      1134444 999988877655555667889999888776543

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.64  E-value=4.3e-15  Score=124.55  Aligned_cols=223  Identities=16%  Similarity=0.134  Sum_probs=139.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecc--cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE--RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      +||||||+|.||++++++|+++|++|+.+++.  ....+....+...    .++.++.+|+++.+  ++.++++..    
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~----~~~~~i~~Di~~~~--~l~~~~~~~----   71 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL----GNFEFVHGDIRNKN--DVTRLITKY----   71 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT----CCCEEEECCTTCHH--HHHHHHHHH----
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhcc----CCcEEEEcccCCHH--HHHHHHHhc----
Confidence            58999999999999999999999999998732  2222222333322    58899999999988  888887754    


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC----------
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG----------  154 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~----------  154 (266)
                       ++|++||+|+....     ....++....+++|+.++.++++++...-     ..+.++.||.......          
T Consensus        72 -~~d~Vih~aa~~~~-----~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-----~~~~i~~sS~~~~~~~~~~~~~~~~~  140 (338)
T d1orra_          72 -MPDSCFHLAGQVAM-----TTSIDNPCMDFEINVGGTLNLLEAVRQYN-----SNCNIIYSSTNKVYGDLEQYKYNETE  140 (338)
T ss_dssp             -CCSEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHHC-----TTCEEEEEEEGGGGTTCTTSCEEECS
T ss_pred             -CCceEEeecccccc-----cccccChHHHHHHHHHHHHHHHHhhhccc-----cccccccccccccccccccccccccc
Confidence             68999999976321     12234557889999999999998876532     2355555554433221          


Q ss_pred             ----------------CCCCchhhHHhHHHHHHHHHHHHHHhCCCC--cEEEEEecCcccCCCcccccccHHHHHHHhh-
Q 024517          155 ----------------LYPGAAAYGACAASIHQLVRTAAMEIGKHK--IRVNGIARGLHLQDEYPIAVGQERAVKLVRE-  215 (266)
Q Consensus       155 ----------------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~-  215 (266)
                                      ...+...|+.+|...+.+.......+....  ++...+.+|...........  ..+...... 
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  218 (338)
T d1orra_         141 TRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWV--GWFCQKAVEI  218 (338)
T ss_dssp             SCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHH--HHHHHHHHHH
T ss_pred             ccccccccccCcccCCccccccccccccchhhhhhhhhhhccCcccccccccceeecccccccccccc--chhhHHHHHH
Confidence                            012467899999999999999888864322  12222222322222111111  111111111 


Q ss_pred             ----ccCCC---------CCCCChhhHHHHHHHHccCCCCcccccEEEEcCC
Q 024517          216 ----AAPLH---------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA  254 (266)
Q Consensus       216 ----~~~~~---------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG  254 (266)
                          ..|..         .+... +|+++++..++... ....|+.+.+.+|
T Consensus       219 ~~~~~~~~~~~g~g~~~r~~~~v-~D~~~~~~~~l~~~-~~~~~~~~~i~~~  268 (338)
T d1orra_         219 KNGINKPFTISGNGKQVRDVLHA-EDMISLYFTALANV-SKIRGNAFNIGGT  268 (338)
T ss_dssp             HTTCCCCEEEESSSCCEEECEEH-HHHHHHHHHHHHTH-HHHTTCEEEESSC
T ss_pred             HhccCCceEEeCCCceeEeeecc-cchhhHHHHHHhcc-ccccCcccccccc
Confidence                11111         12223 49999998887542 3467888887554

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.64  E-value=6.1e-16  Score=131.65  Aligned_cols=227  Identities=11%  Similarity=0.029  Sum_probs=151.0

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      |+ ++.+||||||+|.||++++++|.++|+.|+++++...... ...       -....+..+|+.+.+  .+.+++   
T Consensus        12 ~~-~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~-~~~-------~~~~~~~~~D~~~~~--~~~~~~---   77 (363)
T d2c5aa1          12 PS-ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM-TED-------MFCDEFHLVDLRVME--NCLKVT---   77 (363)
T ss_dssp             TT-SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS-CGG-------GTCSEEEECCTTSHH--HHHHHH---
T ss_pred             CC-CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch-hhh-------cccCcEEEeechhHH--HHHHHh---
Confidence            44 5778999999999999999999999999999983221110 000       135567778988876  544443   


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC------
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG------  154 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~------  154 (266)
                          ..+|.+||.|+.....    ....+.....+..|+.++..++.++...    + -.++|++||.......      
T Consensus        78 ----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~~n~~gt~~ll~~~~~~----~-vk~~i~~SS~~~~~~~~~~~~~  144 (363)
T d2c5aa1          78 ----EGVDHVFNLAADMGGM----GFIQSNHSVIMYNNTMISFNMIEAARIN----G-IKRFFYASSACIYPEFKQLETT  144 (363)
T ss_dssp             ----TTCSEEEECCCCCCCH----HHHTTCHHHHHHHHHHHHHHHHHHHHHT----T-CSEEEEEEEGGGSCGGGSSSSS
T ss_pred             ----hcCCeEeecccccccc----cccccccccccccccchhhHHHHhHHhh----C-cccccccccccccccccccccc
Confidence                3689999999763221    1112345777888999999888887553    2 3589999997654321      


Q ss_pred             ----------CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc-----cHHHHHHHhhccC-
Q 024517          155 ----------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-----QERAVKLVREAAP-  218 (266)
Q Consensus       155 ----------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-----~~~~~~~~~~~~~-  218 (266)
                                +..+...|+.+|.+.+.+++.+.+++   |+++..+.|+.+..+.......     ............+ 
T Consensus       145 ~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (363)
T d2c5aa1         145 NVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRF  221 (363)
T ss_dssp             SCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCE
T ss_pred             ccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCCcccccccccccccccccccccccc
Confidence                      01235679999999999999988774   6899999999998765322211     1111111111111 


Q ss_pred             --------CCCCCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCCc
Q 024517          219 --------LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM  262 (266)
Q Consensus       219 --------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  262 (266)
                              ...+...+ |+++++..++...    .|+.+++.+|..++..++
T Consensus       222 ~~~g~g~~~rd~i~v~-D~~~~~~~~~~~~----~~~~~ni~~~~~~s~~~l  268 (363)
T d2c5aa1         222 EMWGDGLQTRSFTFID-ECVEGVLRLTKSD----FREPVNIGSDEMVSMNEM  268 (363)
T ss_dssp             EEESCSCCEECCEEHH-HHHHHHHHHHHSS----CCSCEEECCCCCEEHHHH
T ss_pred             cccCCCCeEEEEeehh-HHHHHHHHHHhCC----CCCeEEEecCCcccHHHH
Confidence                    11234444 9999999888542    467788888877665443

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.63  E-value=1.2e-14  Score=122.57  Aligned_cols=231  Identities=10%  Similarity=-0.008  Sum_probs=153.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec-ccccHHHHHHHhccc--CCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN-ERRLSSVAEKMMGSL--KGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +-|++|||||+|.||++++++|.++|++|+.+++ .....+....+....  ....++.++.+|..|..  ......   
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~--~~~~~~---   89 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLD--DCNNAC---   89 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHH--HHHHHH---
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccc--cccccc---
Confidence            5689999999999999999999999999999873 222222222221111  01257889999998866  433222   


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC------
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG------  154 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~------  154 (266)
                          ...+.++|.+.....     ....++....+++|+.++..+++++...    + -.++|++||.......      
T Consensus        90 ----~~~~~v~~~~a~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~-~~~~i~~SS~~vyg~~~~~~~~  155 (341)
T d1sb8a_          90 ----AGVDYVLHQAALGSV-----PRSINDPITSNATNIDGFLNMLIAARDA----K-VQSFTYAASSSTYGDHPGLPKV  155 (341)
T ss_dssp             ----TTCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGGTTCCCSSBC
T ss_pred             ----ccccccccccccccc-----cccccCccchhheeehhHHHHHHHHHhc----C-CceEEEcccceeeCCCCCCCcc
Confidence                468899988765221     1244667889999999999999988543    2 3589999997654221      


Q ss_pred             ---CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCccccccc----HHHHHHHhhccCCCC------
Q 024517          155 ---LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ----ERAVKLVREAAPLHR------  221 (266)
Q Consensus       155 ---~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~------  221 (266)
                         +..+...|+.+|.+.+.+++.+.+..   ++++..+.|+.+.++........    ...........|..-      
T Consensus       156 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~  232 (341)
T d1sb8a_         156 EDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGET  232 (341)
T ss_dssp             TTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCC
T ss_pred             CCCCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCE
Confidence               12345789999999999999998874   58888999988887654322111    122233332222221      


Q ss_pred             ---CCCChhhHHHHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          222 ---WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       222 ---~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                         +... +|++.++..++... ....|+.+.+..+..++
T Consensus       233 ~r~~i~v-~D~~~a~~~~~~~~-~~~~~~~~~~~~~~~~s  270 (341)
T d1sb8a_         233 SRDFCYI-ENTVQANLLAATAG-LDARNQVYNIAVGGRTS  270 (341)
T ss_dssp             EECCEEH-HHHHHHHHHHHTCC-GGGCSEEEEESCSCCEE
T ss_pred             EEEEEEE-eccchhhhhhhhcc-ccccceeeeecccccch
Confidence               2223 49999988877543 33567888887666554

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.63  E-value=4.6e-15  Score=125.39  Aligned_cols=220  Identities=15%  Similarity=0.167  Sum_probs=140.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEE--EEeccc--ccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLV--LVGNER--RLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      -|+||||||+|.||++++++|.++|+.|.  ..++..  ........+    . ..++.++.+|++|.+  .+..++   
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~----~-~~~i~~~~~Di~d~~--~~~~~~---   71 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI----L-GDRVELVVGDIADAE--LVDKLA---   71 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG----C-SSSEEEEECCTTCHH--HHHHHH---
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHh----h-cCCeEEEEccCCCHH--HHHHHH---
Confidence            47899999999999999999999998654  443211  111111111    1 358999999999987  666654   


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc-------
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER-------  153 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~-------  153 (266)
                          ...+.++|.|+.....     ....+....+++|+.++.+++..+...      +.+++++||......       
T Consensus        72 ----~~~~~v~~~a~~~~~~-----~~~~~~~~~~~~N~~g~~nll~~~~~~------~~k~i~~ss~~vyg~~~~~~~~  136 (346)
T d1oc2a_          72 ----AKADAIVHYAAESHND-----NSLNDPSPFIHTNFIGTYTLLEAARKY------DIRFHHVSTDEVYGDLPLREDL  136 (346)
T ss_dssp             ----TTCSEEEECCSCCCHH-----HHHHCCHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGGCCBCCGGGS
T ss_pred             ----hhhhhhhhhhhccccc-----chhhCcccceeeehHhHHhhhhhhccc------cccccccccceEecccCccccc
Confidence                3578899998763221     112334677899999999999877443      247788877654311       


Q ss_pred             --------------CCCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCC
Q 024517          154 --------------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPL  219 (266)
Q Consensus       154 --------------~~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~  219 (266)
                                    ....+...|+.+|.+.+.+++...+++   ++++..+.|+.+..|.......-..+........+.
T Consensus       137 ~~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~  213 (346)
T d1oc2a_         137 PGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKP  213 (346)
T ss_dssp             TTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCC
T ss_pred             cccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCCCCccchhHHHHHHHHcCCce
Confidence                          011234679999999999999988773   799999999999887543211112222222222222


Q ss_pred             CC---------CCCChhhHHHHHHHHccCCCCcccccEEEEcCCcc
Q 024517          220 HR---------WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS  256 (266)
Q Consensus       220 ~~---------~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~  256 (266)
                      .-         +... +|+++++..++...   ..|..+.+.+|..
T Consensus       214 ~i~~~g~~~r~~i~v-~D~a~a~~~~~~~~---~~~~~~~~~~~~~  255 (346)
T d1oc2a_         214 KLYGEGKNVRDWIHT-NDHSTGVWAILTKG---RMGETYLIGADGE  255 (346)
T ss_dssp             EEETTSCCEEECEEH-HHHHHHHHHHHHHC---CTTCEEEECCSCE
T ss_pred             eEeCCCCccccccch-hhHHHHHHHHHhhc---ccCcccccccccc
Confidence            11         2223 49999998877543   2344445544443

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.61  E-value=7.7e-15  Score=122.75  Aligned_cols=225  Identities=13%  Similarity=0.104  Sum_probs=150.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeE------EEEecc--cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRL------VLVGNE--RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      +||||||+|.||++++++|+++|+.|      +..++.  .........+    ....++.++..|+++..  .....  
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~----~~~~~~~~~~~d~~~~~--~~~~~--   73 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV----DADPRLRFVHGDIRDAG--LLARE--   73 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG----TTCTTEEEEECCTTCHH--HHHHH--
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh----hcCCCeEEEEeccccch--hhhcc--
Confidence            48999999999999999999999754      333311  1111111111    11357899999998876  43332  


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC----
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG----  154 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~----  154 (266)
                           ...+|.++|+|+....     .....+.+..+++|+.++..+++++...    + ..++|++||.......    
T Consensus        74 -----~~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~~~~~~----~-~~~~I~~Ss~~~yg~~~~~~  138 (322)
T d1r6da_          74 -----LRGVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAVDA----G-VGRVVHVSTNQVYGSIDSGS  138 (322)
T ss_dssp             -----TTTCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHT----T-CCEEEEEEEGGGGCCCSSSC
T ss_pred             -----ccccceEEeecccccc-----cccccchHHHhhhhHHHHHHHHHHHHHc----C-CceEEEeecceeecCCCCCC
Confidence                 2478999999976321     1233445777899999999999988543    2 3689999987653221    


Q ss_pred             -----CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCC--------
Q 024517          155 -----LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHR--------  221 (266)
Q Consensus       155 -----~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--------  221 (266)
                           +..+...|+.+|.+.+.+++.+++++   ++++..+.|+.+..|.......-..+........|..-        
T Consensus       139 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r  215 (322)
T d1r6da_         139 WTESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVR  215 (322)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEE
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEE
Confidence                 12345689999999999999998874   68999999999988754321112223333323223221        


Q ss_pred             -CCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCCC
Q 024517          222 -WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       222 -~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                       +... +|+|+++..++....   .|+.+++..|..++..+
T Consensus       216 ~~i~v-~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s~~e  252 (322)
T d1r6da_         216 EWVHT-DDHCRGIALVLAGGR---AGEIYHIGGGLELTNRE  252 (322)
T ss_dssp             EEEEH-HHHHHHHHHHHHHCC---TTCEEEECCCCEEEHHH
T ss_pred             ccEEH-HHHHHHHHHHHhCCC---CCCeeEEeecccchhHH
Confidence             1223 499999999987543   57889998887766443

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=3.8e-14  Score=110.94  Aligned_cols=198  Identities=14%  Similarity=0.133  Sum_probs=122.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ..|+++||||+|+||++++++|+++|++|.++. +++++.+.         ...++.++.+|++|.+  ++.++++    
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~---------~~~~~~~~~gD~~d~~--~l~~al~----   66 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE---------GPRPAHVVVGDVLQAA--DVDKTVA----   66 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS---------SCCCSEEEESCTTSHH--HHHHHHT----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc---------cccccccccccccchh--hHHHHhc----
Confidence            467899999999999999999999999999998 44443211         1256889999999988  7766653    


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC--CCCch
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL--YPGAA  160 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~--~~~~~  160 (266)
                         +.|++|+++|......   ...         ++..+    .+.+++.+++++ -.++|++||........  .+...
T Consensus        67 ---~~d~vi~~~g~~~~~~---~~~---------~~~~~----~~~l~~aa~~~~-v~r~i~~ss~~~~~~~~~~~~~~~  126 (205)
T d1hdoa_          67 ---GQDAVIVLLGTRNDLS---PTT---------VMSEG----ARNIVAAMKAHG-VDKVVACTSAFLLWDPTKVPPRLQ  126 (205)
T ss_dssp             ---TCSEEEECCCCTTCCS---CCC---------HHHHH----HHHHHHHHHHHT-CCEEEEECCGGGTSCTTCSCGGGH
T ss_pred             ---CCCEEEEEeccCCchh---hhh---------hhHHH----HHHHHHHHHhcC-CCeEEEEeeeeccCCCcccccccc
Confidence               6899999998632211   111         11223    333444555554 46899999865433211  11223


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHHHccCC
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  240 (266)
                      .|...|...+.+.       ...+++...|.||.+..........      ...+......+...+ |+|+.++.++...
T Consensus       127 ~~~~~~~~~e~~l-------~~~~~~~tiirp~~~~~~~~~~~~~------~~~~~~~~~~~i~~~-DvA~~~~~~l~~~  192 (205)
T d1hdoa_         127 AVTDDHIRMHKVL-------RESGLKYVAVMPPHIGDQPLTGAYT------VTLDGRGPSRVISKH-DLGHFMLRCLTTD  192 (205)
T ss_dssp             HHHHHHHHHHHHH-------HHTCSEEEEECCSEEECCCCCSCCE------EESSSCSSCSEEEHH-HHHHHHHHTTSCS
T ss_pred             ccchHHHHHHHHH-------HhcCCceEEEecceecCCCCcccEE------EeeCCCCCCCcCCHH-HHHHHHHHHhCCC
Confidence            4455555544332       2358999999999886432211100      000011111233444 9999999999653


Q ss_pred             CCcccccEEEEc
Q 024517          241 SRYMTGTTIYVD  252 (266)
Q Consensus       241 ~~~~~G~~i~~d  252 (266)
                        ...|+.+.+-
T Consensus       193 --~~~g~~~~~s  202 (205)
T d1hdoa_         193 --EYDGHSTYPS  202 (205)
T ss_dssp             --TTTTCEEEEE
T ss_pred             --CCCCEEEecC
Confidence              3558877663

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.57  E-value=8.6e-15  Score=121.90  Aligned_cols=156  Identities=13%  Similarity=0.131  Sum_probs=117.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +.|+||||||+|.||++++++|+++|+.|+++++..                      .+|+.+.+  .+..+++.    
T Consensus         1 ~kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~----------------------~~~~~~~~--~~~~~~~~----   52 (315)
T d1e6ua_           1 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSR--AVHDFFAS----   52 (315)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHH--HHHHHHHH----
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch----------------------hccccCHH--HHHHHHhh----
Confidence            367899999999999999999999999998876321                      05788877  77777653    


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---------
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---------  154 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------  154 (266)
                       ..+|.++|+|+.....    .....+....++.|+.++.++++++...    + -.++|++||.+...+.         
T Consensus        53 -~~~d~v~~~a~~~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~-v~~~i~~SS~~vyg~~~~~~~~E~~  122 (315)
T d1e6ua_          53 -ERIDQVYLAAAKVGGI----VANNTYPADFIYQNMMIESNIIHAAHQN----D-VNKLLFLGSSCIYPKLAKQPMAESE  122 (315)
T ss_dssp             -HCCSEEEECCCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEECCGGGSCTTCCSSBCGGG
T ss_pred             -cCCCEEEEcchhcccc----ccchhhHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEECCceEcCCCCCCCccCCc
Confidence             3699999998653211    1223445666888999999998887553    1 2589999998754321         


Q ss_pred             -----CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCc
Q 024517          155 -----LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY  200 (266)
Q Consensus       155 -----~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~  200 (266)
                           +.+....|+.+|.+.+.+++.+.++.   |+++..+.|+.|..|..
T Consensus       123 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~~  170 (315)
T d1e6ua_         123 LLQGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHD  170 (315)
T ss_dssp             TTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTC
T ss_pred             cccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCC
Confidence                 01124579999999999999998874   79999999999988754

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.57  E-value=4e-14  Score=119.65  Aligned_cols=177  Identities=14%  Similarity=0.089  Sum_probs=128.5

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .++|+||||||+|.||.++++.|+++|++|++++ +........+....    ...+.++.+|++|.+  .+.++++.. 
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~----~~~i~~~~~Dl~d~~--~l~~~~~~~-   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV----ADGMQSEIGDIRDQN--KLLESIREF-   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT----TTTSEEEECCTTCHH--HHHHHHHHH-
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc----ccCCeEEEeeccChH--hhhhhhhhc-
Confidence            3789999999999999999999999999999998 44444444333321    247899999999988  777777653 


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC-------
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-------  154 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~-------  154 (266)
                          .+|+++|+|+....     ..+.+..+..+++|+.++..+++++...-.    ...+++.|+.......       
T Consensus        79 ----~~~~v~~~aa~~~~-----~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~----~~~~~~~s~~~~~~~~~~~~~~~  145 (356)
T d1rkxa_          79 ----QPEIVFHMAAQPLV-----RLSYSEPVETYSTNVMGTVYLLEAIRHVGG----VKAVVNITSDKCYDNKEWIWGYR  145 (356)
T ss_dssp             ----CCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHHCC----CCEEEEECCGGGBCCCCSSSCBC
T ss_pred             ----hhhhhhhhhccccc-----cccccCCccccccccccchhhhhhhhcccc----ccccccccccccccccccccccc
Confidence                78999999975311     122345677889999999999988865321    2345555544333211       


Q ss_pred             ---CCCCchhhHHhHHHHHHHHHHHHHHhCC------CCcEEEEEecCcccCCC
Q 024517          155 ---LYPGAAAYGACAASIHQLVRTAAMEIGK------HKIRVNGIARGLHLQDE  199 (266)
Q Consensus       155 ---~~~~~~~y~~sK~a~~~~~~~la~e~~~------~~i~v~~v~pG~v~t~~  199 (266)
                         ...+...|+.+|...+.+++..+.++..      .++.+..+.|+.+..|.
T Consensus       146 ~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~  199 (356)
T d1rkxa_         146 ENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGG  199 (356)
T ss_dssp             TTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTT
T ss_pred             cccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCC
Confidence               1224667999999999999998887643      36788899998887664

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.56  E-value=1.2e-14  Score=115.82  Aligned_cols=226  Identities=14%  Similarity=0.046  Sum_probs=134.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe--cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG--NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ++||||||+|.||++++++|+++|+.|.+.+  |...   ....+      ..++.++.+|+++.+  +..+++      
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~---~~~~~------~~~~~~~~~d~~~~~--~~~~~~------   66 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQ---GKEKI------GGEADVFIGDITDAD--SINPAF------   66 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHH---HHHHT------TCCTTEEECCTTSHH--HHHHHH------
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHH---HHHhc------cCCcEEEEeeecccc--cccccc------
Confidence            6899999999999999999999998755444  3321   12222      246789999999988  766655      


Q ss_pred             hCCCCEEEEcCCCCCCCCC--------CCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC
Q 024517           84 LGNLDAFVHCYTYEGKMQD--------PLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL  155 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~--------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~  155 (266)
                       .++|.++|+++.......        ........+.....+|+.++..+........     .+...+.++.....+. 
T Consensus        67 -~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~s~~~~~~~~-  139 (252)
T d2q46a1          67 -QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-----VKHIVVVGSMGGTNPD-  139 (252)
T ss_dssp             -TTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-----CSEEEEEEETTTTCTT-
T ss_pred             -ccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc-----ccccccccccccCCCC-
Confidence             468999999876332111        1111223345566788888888777665543     3677777776554432 


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCCCCCCChhhHHHHHHH
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY  235 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
                      .+....+...+.....+...+..+   .|+++..+.||.+..+............... ... ...+... +|+|++++.
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-~~~-~~~~i~~-~Dva~a~~~  213 (252)
T d2q46a1         140 HPLNKLGNGNILVWKRKAEQYLAD---SGTPYTIIRAGGLLDKEGGVRELLVGKDDEL-LQT-DTKTVPR-ADVAEVCIQ  213 (252)
T ss_dssp             CGGGGGGGCCHHHHHHHHHHHHHH---SSSCEEEEEECEEECSCTTSSCEEEESTTGG-GGS-SCCEEEH-HHHHHHHHH
T ss_pred             cccccccccchhhhhhhhhhhhhc---ccccceeecceEEECCCcchhhhhhccCccc-ccC-CCCeEEH-HHHHHHHHH
Confidence            222222222333333333333333   5789999999999876532211000000000 001 1122334 499999999


Q ss_pred             HccCCCCcccccEEEEcCCccccCCCcc
Q 024517          236 LISDGSRYMTGTTIYVDGAQSITRPRMR  263 (266)
Q Consensus       236 l~s~~~~~~~G~~i~~dgG~~~~~~~~~  263 (266)
                      ++..+  ...|+.+.+.++...+...++
T Consensus       214 ~l~~~--~~~g~~~~i~~~~~~~~~~~~  239 (252)
T d2q46a1         214 ALLFE--EAKNKAFDLGSKPEGTSTPTK  239 (252)
T ss_dssp             HTTCG--GGTTEEEEEEECCTTTSCCCC
T ss_pred             HhCCc--cccCcEEEEeeCCCCCChhHH
Confidence            88653  467899988655444433333

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.54  E-value=2.2e-13  Score=116.43  Aligned_cols=178  Identities=17%  Similarity=0.120  Sum_probs=125.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHH-cCCeEEEEec----------ccccHHHHHHHhccc-----CCCCCeEEEEEecCCC
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAK-RGCRLVLVGN----------ERRLSSVAEKMMGSL-----KGGQPVEVVGLDMEED   68 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~-~g~~v~~~~~----------~~~~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~   68 (266)
                      +-+||||||+|.||++++++|++ .|++|+++|+          .+..+.....+....     ....+..++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            44699999999999999999996 5899998862          122333333332211     1135688999999998


Q ss_pred             chHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           69 REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                      +  .++++++.    ..++|+|+|.|+....     ....+.....+++|+.++..++.++...-     ...++++++.
T Consensus        82 ~--~l~~~~~~----~~~~d~ViH~Aa~~~~-----~~~~~~~~~~~~~N~~~t~~~l~~~~~~~-----~~~~~~~~s~  145 (383)
T d1gy8a_          82 D--FLNGVFTR----HGPIDAVVHMCAFLAV-----GESVRDPLKYYDNNVVGILRLLQAMLLHK-----CDKIIFSSSA  145 (383)
T ss_dssp             H--HHHHHHHH----SCCCCEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEEEEG
T ss_pred             H--Hhhhhhhc----cceeehhhcccccccc-----cccccccccccccccccccccchhhhccC-----Cccccccccc
Confidence            8  77777754    4679999999986322     12234456778899999999988886432     3466666665


Q ss_pred             cccccC----------------CCCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcc
Q 024517          149 IGAERG----------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYP  201 (266)
Q Consensus       149 ~~~~~~----------------~~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~  201 (266)
                      ......                ...+...|+.+|.+.+.+++.+...   .|+.+..+.|+.+..|...
T Consensus       146 ~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~gl~~~~lR~~~vyG~~~~  211 (383)
T d1gy8a_         146 AIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEA---YGIKGICLRYFNACGAHED  211 (383)
T ss_dssp             GGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECCCTT
T ss_pred             ccccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHH---hCCCEEEEecceeeccCcc
Confidence            443211                1224678999999999999998876   4688888998888776543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=5.6e-14  Score=112.10  Aligned_cols=195  Identities=14%  Similarity=0.100  Sum_probs=128.4

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC--eEEEEec-ccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC--RLVLVGN-ERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |++|+||||||||.||++++++|+++|.  +|++++| +......      .   ..++....+|+.+.+  ++.+.+  
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~------~---~~~i~~~~~D~~~~~--~~~~~~--   78 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE------A---YKNVNQEVVDFEKLD--DYASAF--   78 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG------G---GGGCEEEECCGGGGG--GGGGGG--
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc------c---cceeeeeeecccccc--cccccc--
Confidence            5789999999999999999999999996  7888884 3322210      0   146677778888766  544333  


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCc
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA  159 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  159 (266)
                           ..+|+++|++|..        ....+.....++|+.++..+++.+..    .+ -.+++++|+.....    ...
T Consensus        79 -----~~~d~vi~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~----~~-v~~fi~~Ss~~~~~----~~~  136 (232)
T d2bkaa1          79 -----QGHDVGFCCLGTT--------RGKAGAEGFVRVDRDYVLKSAELAKA----GG-CKHFNLLSSKGADK----SSN  136 (232)
T ss_dssp             -----SSCSEEEECCCCC--------HHHHHHHHHHHHHTHHHHHHHHHHHH----TT-CCEEEEECCTTCCT----TCS
T ss_pred             -----ccccccccccccc--------ccccchhhhhhhcccccceeeecccc----cC-ccccccCCcccccc----Ccc
Confidence                 5789999999862        22345566778899999998887743    22 35899999976533    334


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCCc-EEEEEecCcccCCCcccccccHHHHHHHhhccCCCCC---CCChhhHHHHHHH
Q 024517          160 AAYGACAASIHQLVRTAAMEIGKHKI-RVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRW---LDVKNDLASTVIY  235 (266)
Q Consensus       160 ~~y~~sK~a~~~~~~~la~e~~~~~i-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~dva~~~~~  235 (266)
                      ..|+.+|...+...+.       .+. ++.-+.||.+..+...... .+..........|....   .-+.+|+|++++.
T Consensus       137 ~~Y~~~K~~~E~~l~~-------~~~~~~~IlRP~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~  208 (232)
T d2bkaa1         137 FLYLQVKGEVEAKVEE-------LKFDRYSVFRPGVLLCDRQESRP-GEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLN  208 (232)
T ss_dssp             SHHHHHHHHHHHHHHT-------TCCSEEEEEECCEEECTTGGGSH-HHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHH
T ss_pred             chhHHHHHHhhhcccc-------ccccceEEecCceeecCCCcCcH-HHHHHHHHhhccCCcccCCCeEEHHHHHHHHHH
Confidence            6799999888765532       233 4677899999887543321 12222233222222211   1122599999888


Q ss_pred             HccCC
Q 024517          236 LISDG  240 (266)
Q Consensus       236 l~s~~  240 (266)
                      ++...
T Consensus       209 ~~~~~  213 (232)
T d2bkaa1         209 NVVRP  213 (232)
T ss_dssp             HHTSC
T ss_pred             HHhcC
Confidence            87543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.21  E-value=8.1e-11  Score=96.66  Aligned_cols=215  Identities=12%  Similarity=0.080  Sum_probs=114.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccc-c-HHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERR-L-SSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +.++||||||+|.||++++++|+++|++|+++.|... . ....+.+... . ..++.++.+|+++.+  ++.+.+    
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~-~-~~~v~~v~~d~~d~~--~~~~~~----   73 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYF-K-QLGAKLIEASLDDHQ--RLVDAL----   73 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHH-H-TTTCEEECCCSSCHH--HHHHHH----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhh-c-cCCcEEEEeecccch--hhhhhc----
Confidence            3456999999999999999999999999998884322 1 1112222111 1 257889999999987  655554    


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC---CCC
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL---YPG  158 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~---~~~  158 (266)
                         ...+.++++++....                ..|..+...++..+    .+.. ..++++.||........   ...
T Consensus        74 ---~~~~~~~~~~~~~~~----------------~~~~~~~~~~l~~a----~~~~-~~~~v~~Ss~g~~~~~~~~~~~~  129 (312)
T d1qyda_          74 ---KQVDVVISALAGGVL----------------SHHILEQLKLVEAI----KEAG-NIKRFLPSEFGMDPDIMEHALQP  129 (312)
T ss_dssp             ---TTCSEEEECCCCSSS----------------STTTTTHHHHHHHH----HHSC-CCSEEECSCCSSCTTSCCCCCSS
T ss_pred             ---cCcchhhhhhhhccc----------------ccchhhhhHHHHHH----HHhc-CCcEEEEeeccccCCCcccccch
Confidence               467899998865211                12223333333333    2222 35667777653322211   122


Q ss_pred             chhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccC------CC-CCCCChhhHHH
Q 024517          159 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAP------LH-RWLDVKNDLAS  231 (266)
Q Consensus       159 ~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~dva~  231 (266)
                      ...|...|...    +....+   .++....+.|+.+..+...................+      .. .+... +|+|+
T Consensus       130 ~~~~~~~~~~~----~~~~~~---~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v-~Dva~  201 (312)
T d1qyda_         130 GSITFIDKRKV----RRAIEA---ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDE-DDVGT  201 (312)
T ss_dssp             TTHHHHHHHHH----HHHHHH---TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECH-HHHHH
T ss_pred             hhhhhHHHHHH----HHhhcc---cccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeH-HHHHH
Confidence            33344444433    333333   467777888887754322111000000000000000      01 12333 49999


Q ss_pred             HHHHHccCCCCcccccEEEEcCCccccC
Q 024517          232 TVIYLISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       232 ~~~~l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      +++.++... ...++..+.+.++..++-
T Consensus       202 a~~~~l~~~-~~~~~~~~~~~~~~~~s~  228 (312)
T d1qyda_         202 YTIKSIDDP-QTLNKTMYIRPPMNILSQ  228 (312)
T ss_dssp             HHHHHTTCG-GGSSSEEECCCGGGEEEH
T ss_pred             HHHHHhcCc-cccCceEEEeCCCcCCCH
Confidence            999988653 233334445555555443

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.19  E-value=1.1e-10  Score=98.14  Aligned_cols=215  Identities=13%  Similarity=0.065  Sum_probs=123.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +.|+|+||||||.||++++++|+++|++|+++.|...... ...+...    ..+.++..|+.|..  +..   +   ..
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~-~~~~~~~----~~v~~~~gD~~d~~--~~~---~---~a   68 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI-AEELQAI----PNVTLFQGPLLNNV--PLM---D---TL   68 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH-HHHHHTS----TTEEEEESCCTTCH--HHH---H---HH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhh-hhhhccc----CCCEEEEeeCCCcH--HHH---H---HH
Confidence            5799999999999999999999999999999884332222 2233222    57899999999876  432   2   22


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhhH
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG  163 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y~  163 (266)
                      +...|.++.+.... .      ..          ++.....++.++.    +.+ ..+++++||..............|.
T Consensus        69 ~~~~~~~~~~~~~~-~------~~----------~~~~~~~~~~aa~----~ag-v~~~v~~Ss~~~~~~~~~~~~~~~~  126 (350)
T d1xgka_          69 FEGAHLAFINTTSQ-A------GD----------EIAIGKDLADAAK----RAG-TIQHYIYSSMPDHSLYGPWPAVPMW  126 (350)
T ss_dssp             HTTCSEEEECCCST-T------SC----------HHHHHHHHHHHHH----HHS-CCSEEEEEECCCGGGTSSCCCCTTT
T ss_pred             hcCCceEEeecccc-c------ch----------hhhhhhHHHHHHH----HhC-CCceEEEeeccccccCCcccchhhh
Confidence            35688888775431 1      11          1122233344332    222 3577777876554433233445566


Q ss_pred             HhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc---cHHHH-HHHhhccCCC-----CCCCChhhHHHHHH
Q 024517          164 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---QERAV-KLVREAAPLH-----RWLDVKNDLASTVI  234 (266)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~---~~~~~-~~~~~~~~~~-----~~~~~~~dva~~~~  234 (266)
                      .+|...+.+.+.       .++....+.|+.+..........   ..... ....-..|..     .+....+|+++.+.
T Consensus       127 ~~k~~~~~~~~~-------~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~  199 (350)
T d1xgka_         127 APKFTVENYVRQ-------LGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALL  199 (350)
T ss_dssp             HHHHHHHHHHHT-------SSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHH
T ss_pred             hhHHHHHHHHHh-------hccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHH
Confidence            777665544332       35677788888765432211110   00000 0000011111     11223359999999


Q ss_pred             HHccCCCCcccccEEEEcCCccccCCC
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSITRPR  261 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~~~~~  261 (266)
                      .++.+..+...|+.+.+.| ..++-.+
T Consensus       200 ~~l~~~~~~~~G~~~~~~g-~~~T~~e  225 (350)
T d1xgka_         200 QIFKDGPQKWNGHRIALTF-ETLSPVQ  225 (350)
T ss_dssp             HHHHHCHHHHTTCEEEECS-EEECHHH
T ss_pred             HHHhCChhhcCCeEEEEeC-CcCCHHH
Confidence            9886555567899998865 4555443

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.19  E-value=2.6e-10  Score=92.44  Aligned_cols=196  Identities=16%  Similarity=0.198  Sum_probs=123.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      ++|||||+|.||++++++|.++|++|+.+++.+                       +|++|.+  +++++++..     +
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------------~D~~d~~--~~~~~l~~~-----~   52 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNVL--AVNKFFNEK-----K   52 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------CCTTCHH--HHHHHHHHH-----C
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------------ccCCCHH--HHHHHHHHc-----C
Confidence            589999999999999999999999999987421                       4889988  888877654     6


Q ss_pred             CCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---------CCC
Q 024517           87 LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---------LYP  157 (266)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~~~  157 (266)
                      +|++||+++.....     ......+..+..|+.....+.......      ...+++.||.......         ...
T Consensus        53 ~d~vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~ss~~v~~~~~~~~~~e~~~~~  121 (281)
T d1vl0a_          53 PNVVINCAAHTAVD-----KCEEQYDLAYKINAIGPKNLAAAAYSV------GAEIVQISTDYVFDGEAKEPITEFDEVN  121 (281)
T ss_dssp             CSEEEECCCCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGSCSCCSSCBCTTSCCC
T ss_pred             CCEEEeeccccccc-----cccccchhhcccccccccccccccccc------cccccccccceeeecccccccccccccc
Confidence            89999998763211     122334566677777776666555443      2456666654332111         124


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHHHHHhhccCCC-------CCCCChhhHH
Q 024517          158 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH-------RWLDVKNDLA  230 (266)
Q Consensus       158 ~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~dva  230 (266)
                      +...|+.+|...+.+++..       +.+...+.|+.+..+.....   ...........+..       .+... +|++
T Consensus       122 ~~~~~~~~k~~~e~~~~~~-------~~~~~i~R~~~vyG~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v-~D~~  190 (281)
T d1vl0a_         122 PQSAYGKTKLEGENFVKAL-------NPKYYIVRTAWLYGDGNNFV---KTMINLGKTHDELKVVHDQVGTPTST-VDLA  190 (281)
T ss_dssp             CCSHHHHHHHHHHHHHHHH-------CSSEEEEEECSEESSSSCHH---HHHHHHHHHCSEEEEESSCEECCEEH-HHHH
T ss_pred             chhhhhhhhhHHHHHHHHh-------CCCccccceeEEeCCCcccc---cchhhhhccCCceeecCCceeccchh-hhhh
Confidence            5677888888877665432       45677899999977643221   11222221211111       12233 4999


Q ss_pred             HHHHHHccCCCCcccccEEEEcCCcccc
Q 024517          231 STVIYLISDGSRYMTGTTIYVDGAQSIT  258 (266)
Q Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgG~~~~  258 (266)
                      +++..++...   .+| .+.+.++..++
T Consensus       191 ~~~~~~~~~~---~~g-~~~~~~~~~~s  214 (281)
T d1vl0a_         191 RVVLKVIDEK---NYG-TFHCTCKGICS  214 (281)
T ss_dssp             HHHHHHHHHT---CCE-EEECCCBSCEE
T ss_pred             hhhhhhhhhc---ccC-ceeEeCCCccc
Confidence            9999998653   244 45555555444

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.15  E-value=1.9e-11  Score=95.59  Aligned_cols=189  Identities=12%  Similarity=0.123  Sum_probs=111.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCC--eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGC--RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|++|||||||.||++++++|+++|+  +|+...|....+            ..++   ..+..|..  ++   .+   .
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~------------~~~~---~~~~~d~~--~~---~~---~   58 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE------------HPRL---DNPVGPLA--EL---LP---Q   58 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC------------CTTE---ECCBSCHH--HH---GG---G
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh------------cccc---cccccchh--hh---hh---c
Confidence            58999999999999999999999998  444444322110            1222   22333322  21   11   1


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhh
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY  162 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y  162 (266)
                      ..+.+|.+++++|....       ....-+...++|+.++..+++.+..    .+ -.+++++||..+..    .....|
T Consensus        59 ~~~~~d~vi~~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~~----~~-v~~~i~~Ss~~~~~----~~~~~y  122 (212)
T d2a35a1          59 LDGSIDTAFCCLGTTIK-------EAGSEEAFRAVDFDLPLAVGKRALE----MG-ARHYLVVSALGADA----KSSIFY  122 (212)
T ss_dssp             CCSCCSEEEECCCCCHH-------HHSSHHHHHHHHTHHHHHHHHHHHH----TT-CCEEEEECCTTCCT----TCSSHH
T ss_pred             cccchheeeeeeeeecc-------ccccccccccchhhhhhhccccccc----cc-cccccccccccccc----ccccch
Confidence            23578999999976311       1112356778899999888887643    22 36899999875532    445679


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCCc-EEEEEecCcccCCCcccccccHHHHHHHhhccCCC-CCCCChhhHHHHHHHHccCC
Q 024517          163 GACAASIHQLVRTAAMEIGKHKI-RVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH-RWLDVKNDLASTVIYLISDG  240 (266)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~  240 (266)
                      ..+|...+.+.+       ..+. +...+.|+.|..+....... ...........+.+ +.... +|+|+++..++...
T Consensus       123 ~~~K~~~E~~l~-------~~~~~~~~I~Rp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~i~v-~DvA~ai~~~~~~~  193 (212)
T d2a35a1         123 NRVKGELEQALQ-------EQGWPQLTIARPSLLFGPREEFRLA-EILAAPIARILPGKYHGIEA-CDLARALWRLALEE  193 (212)
T ss_dssp             HHHHHHHHHHHT-------TSCCSEEEEEECCSEESTTSCEEGG-GGTTCCCC----CHHHHHHH-HHHHHHHHHHHTCC
T ss_pred             hHHHHHHhhhcc-------ccccccceeeCCcceeCCcccccHH-HHHHHHHhhccCCCCcEEEH-HHHHHHHHHHHcCC
Confidence            999988776543       2233 57788999998765332111 00000000000000 01122 59999999998654


Q ss_pred             C
Q 024517          241 S  241 (266)
Q Consensus       241 ~  241 (266)
                      .
T Consensus       194 ~  194 (212)
T d2a35a1         194 G  194 (212)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.13  E-value=5e-10  Score=91.61  Aligned_cols=217  Identities=13%  Similarity=0.127  Sum_probs=126.0

Q ss_pred             EEEecCCCchHHHHHHHHHHcCC-eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH--Hh
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGC-RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ--IL   84 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~--~~   84 (266)
                      ||||||+|.||++++++|+++|+ .|+++++-.+..+......      ..    .+|..+.     ....+....  .+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~------~~----~~~~~~~-----~~~~~~~~~~~~~   66 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD------LN----IADYMDK-----EDFLIQIMAGEEF   66 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHT------SC----CSEEEEH-----HHHHHHHHTTCCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccc------cc----hhhhccc-----hHHHHHHhhhhcc
Confidence            79999999999999999999997 6877763322222222211      01    1222222     223333332  34


Q ss_pred             CCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCC---------
Q 024517           85 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL---------  155 (266)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~---------  155 (266)
                      ..+++++|.|+.....    ..   +.+...+.|+.+...+.+.+...      +-++++.||.....+..         
T Consensus        67 ~~~~~i~~~aa~~~~~----~~---~~~~~~~~~~~~~~~~l~~~~~~------~i~~v~~ss~~~~~~~~~~~~~~~~~  133 (307)
T d1eq2a_          67 GDVEAIFHEGACSSTT----EW---DGKYMMDNNYQYSKELLHYCLER------EIPFLYASSAATYGGRTSDFIESREY  133 (307)
T ss_dssp             SSCCEEEECCSCCCTT----CC---CHHHHHHHTHHHHHHHHHHHHHH------TCCEEEEEEGGGGTTCCSCBCSSGGG
T ss_pred             cchhhhhhhccccccc----cc---ccccccccccccccccccccccc------cccccccccccccccccccccccccc
Confidence            5689999998752211    11   23556677788887777765443      23466666655443211         


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccc----cHHHHHHHhhc-cC---------CCC
Q 024517          156 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKLVREA-AP---------LHR  221 (266)
Q Consensus       156 ~~~~~~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~-~~---------~~~  221 (266)
                      ......|+.+|.+.+.+++.+..+   .++.+..+.|..+..|.......    ........... .+         ...
T Consensus       134 ~~~~~~Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~  210 (307)
T d1eq2a_         134 EKPLNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRD  210 (307)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBC
T ss_pred             cccccccccccchhhhhccccccc---cccccccccceeEeeccccccccccccccccccccccccceeeecCccceeee
Confidence            235678999999999999888666   46778888888877765432211    11111211111 11         011


Q ss_pred             CCCChhhHHHHHHHHccCCCCcccccEEEEcCCccccCC
Q 024517          222 WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP  260 (266)
Q Consensus       222 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~  260 (266)
                      +... +|+++++..++...    ....+.+.+|...+..
T Consensus       211 ~~~v-~d~~~~~~~~~~~~----~~~~~~~~~~~~~si~  244 (307)
T d1eq2a_         211 FVYV-GDVADVNLWFLENG----VSGIFNLGTGRAESFQ  244 (307)
T ss_dssp             EEEH-HHHHHHHHHHHHHC----CCEEEEESCSCCBCHH
T ss_pred             eeec-ccHHHHHHHHhhhc----cccccccccccchhHH
Confidence            2223 48999998887543    2346777777665543

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.09  E-value=1.4e-11  Score=100.75  Aligned_cols=213  Identities=15%  Similarity=0.095  Sum_probs=113.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecc-ccc--HHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE-RRL--SSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +.|+||||||+|.||++++++|+++|++|++++|. ...  .+....+....  ...+.++.+|+.+..  ...+.++  
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~--~~~~~~~--   75 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHA--SLVEAVK--   75 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHH--HHHHHHH--
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc--cCCcEEEEeecccch--hhhhhhh--
Confidence            46889999999999999999999999999998843 221  11122222111  246788889999877  6555543  


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCch
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA  160 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  160 (266)
                           ..+.++++++...                    ..+...+.+++.    ... ...+++.||......  .....
T Consensus        76 -----~~~~vi~~~~~~~--------------------~~~~~~~~~a~~----~~~-~~~~~~~s~~~~~~~--~~~~~  123 (307)
T d1qyca_          76 -----NVDVVISTVGSLQ--------------------IESQVNIIKAIK----EVG-TVKRFFPSEFGNDVD--NVHAV  123 (307)
T ss_dssp             -----TCSEEEECCCGGG--------------------SGGGHHHHHHHH----HHC-CCSEEECSCCSSCTT--SCCCC
T ss_pred             -----hceeeeecccccc--------------------cchhhHHHHHHH----Hhc-cccceeeeccccccc--ccccc
Confidence                 5789999886521                    112223333332    222 346666666433222  12222


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCCcEEEEEecCcccCCCcccccccHHHH-H-----HHhhccCCCCCCCChhhHHHHHH
Q 024517          161 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV-K-----LVREAAPLHRWLDVKNDLASTVI  234 (266)
Q Consensus       161 ~y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~dva~~~~  234 (266)
                      .+...+............+   .++....+.|+.+..+............ +     ..........+... +|+|+++.
T Consensus       124 ~~~~~~~~~~~~~~~~~~~---~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v-~Dva~~~~  199 (307)
T d1qyca_         124 EPAKSVFEVKAKVRRAIEA---EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKE-EDIGTFTI  199 (307)
T ss_dssp             TTHHHHHHHHHHHHHHHHH---HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECH-HHHHHHHH
T ss_pred             ccccccccccccccchhhc---cCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcH-HHHHHHHH
Confidence            3333333333333333333   3677788888887654322111000000 0     00000001112334 49999999


Q ss_pred             HHccCCCCcccccEEEEcCCccccC
Q 024517          235 YLISDGSRYMTGTTIYVDGAQSITR  259 (266)
Q Consensus       235 ~l~s~~~~~~~G~~i~~dgG~~~~~  259 (266)
                      .++... ...++..+.+.++..++-
T Consensus       200 ~~l~~~-~~~~~~~~~~~~~~~~s~  223 (307)
T d1qyca_         200 KAVDDP-RTLNKTLYLRLPANTLSL  223 (307)
T ss_dssp             TTSSCG-GGTTEEEECCCGGGEEEH
T ss_pred             HHhcCh-hhcCceeEEeCCCCccCH
Confidence            998643 233344444455555543

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.02  E-value=1.9e-10  Score=93.77  Aligned_cols=130  Identities=15%  Similarity=0.130  Sum_probs=90.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      +||||||+|.||++++++|.++|.. +.++ +...                    +..|++|.+  .++++++..     
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~-v~~~~~~~~--------------------~~~Dl~~~~--~~~~~i~~~-----   53 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNL-IALDVHSKE--------------------FCGDFSNPK--GVAETVRKL-----   53 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEE-EEECTTCSS--------------------SCCCTTCHH--HHHHHHHHH-----
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCE-EEEECCCcc--------------------ccCcCCCHH--HHHHHHHHc-----
Confidence            4999999999999999999998864 4444 3211                    225899988  888888764     


Q ss_pred             CCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccC---------CC
Q 024517           86 NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---------LY  156 (266)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~~  156 (266)
                      ++|+|||+||.....     ...++-+..++.|+.++..+.+++..    .  +.+++++||.......         ..
T Consensus        54 ~~D~Vih~Aa~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~~~~~ss~~~~~~~~~~~~~E~~~~  122 (298)
T d1n2sa_          54 RPDVIVNAAAHTAVD-----KAESEPELAQLLNATSVEAIAKAANE----T--GAWVVHYSTDYVFPGTGDIPWQETDAT  122 (298)
T ss_dssp             CCSEEEECCCCCCHH-----HHTTCHHHHHHHHTHHHHHHHHHHTT----T--TCEEEEEEEGGGSCCCTTCCBCTTSCC
T ss_pred             CCCEEEEeccccccc-----ccccCccccccccccccccchhhhhc----c--ccccccccccccccCCCCCCCcccccc
Confidence            699999999874221     11123356778899999888887632    2  4678888876543221         12


Q ss_pred             CCchhhHHhHHHHHHHHHH
Q 024517          157 PGAAAYGACAASIHQLVRT  175 (266)
Q Consensus       157 ~~~~~y~~sK~a~~~~~~~  175 (266)
                      .+...|+.+|.+.+.+.+.
T Consensus       123 ~p~~~y~~~k~~~e~~~~~  141 (298)
T d1n2sa_         123 SPLNVYGKTKLAGEKALQD  141 (298)
T ss_dssp             CCSSHHHHHHHHHHHHHHH
T ss_pred             CCCchHhhhhhhhhhhHHh
Confidence            2456899999888766543

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.78  E-value=1.2e-13  Score=106.90  Aligned_cols=45  Identities=24%  Similarity=0.327  Sum_probs=39.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcc
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGS   51 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~   51 (266)
                      ++.|+||+|++|+++|+.|+++|++|++.+ ++++++++.+++...
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~   47 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI   47 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            367888889999999999999999999999 778888888887654

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.91  E-value=3.7e-05  Score=57.55  Aligned_cols=81  Identities=19%  Similarity=0.247  Sum_probs=57.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHH---HHHHhcccCCCCCeEEEEEecCCCchHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSV---AEKMMGSLKGGQPVEVVGLDMEEDREGAFDEA   76 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~   76 (266)
                      ++++|+++|.|+ ||.|++++..|.++|. +++++. +.++.++.   .+++...    ........|+.+.+  ++...
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~--~~~~~   87 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNEN----TDCVVTVTDLADQQ--AFAEA   87 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH----SSCEEEEEETTCHH--HHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhh----cCcceEeeeccccc--chhhh
Confidence            468999999999 5799999999999999 677777 44544443   3344333    34456667888766  44433


Q ss_pred             HHHHHHHhCCCCEEEEcCCC
Q 024517           77 VDKACQILGNLDAFVHCYTY   96 (266)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~   96 (266)
                      .       ...|++||+...
T Consensus        88 ~-------~~~diiIN~Tp~  100 (182)
T d1vi2a1          88 L-------ASADILTNGTKV  100 (182)
T ss_dssp             H-------HTCSEEEECSST
T ss_pred             h-------cccceeccccCC
Confidence            3       368999999865

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=3e-05  Score=57.56  Aligned_cols=77  Identities=12%  Similarity=0.137  Sum_probs=52.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +|.+|||+||++++|...++.....|++|+.++ ++++. +..+++      |...   ..|.++.+  -.+    ++.+
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~-~~~~~~------Ga~~---vi~~~~~~--~~~----~i~~   91 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ-KIVLQN------GAHE---VFNHREVN--YID----KIKK   91 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHT------TCSE---EEETTSTT--HHH----HHHH
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccc-cccccc------Cccc---cccccccc--HHH----Hhhh
Confidence            588999999999999999999989999999888 44333 333332      2222   24777665  333    3333


Q ss_pred             Hh--CCCCEEEEcCCC
Q 024517           83 IL--GNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~--g~id~li~~ag~   96 (266)
                      ..  ..+|+++.+.|.
T Consensus        92 ~t~~~g~d~v~d~~g~  107 (174)
T d1yb5a2          92 YVGEKGIDIIIEMLAN  107 (174)
T ss_dssp             HHCTTCEEEEEESCHH
T ss_pred             hhccCCceEEeecccH
Confidence            32  358999998763

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.81  E-value=1.7e-05  Score=59.38  Aligned_cols=80  Identities=14%  Similarity=0.250  Sum_probs=53.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +|.+|||+||++++|...++.....|++|+.+.+.++..+..+++      +....   +|-++.+  ..+...+..  .
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~------Ga~~v---i~~~~~~--~~~~~~~~~--~   95 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI------GFDAA---FNYKTVN--SLEEALKKA--S   95 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT------TCSEE---EETTSCS--CHHHHHHHH--C
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhh------hhhhh---ccccccc--HHHHHHHHh--h
Confidence            588999999999999999999999999999988333223333332      22222   3555555  333333222  1


Q ss_pred             hCCCCEEEEcCCC
Q 024517           84 LGNLDAFVHCYTY   96 (266)
Q Consensus        84 ~g~id~li~~ag~   96 (266)
                      ...+|+++++.|.
T Consensus        96 ~~Gvd~v~D~vG~  108 (182)
T d1v3va2          96 PDGYDCYFDNVGG  108 (182)
T ss_dssp             TTCEEEEEESSCH
T ss_pred             cCCCceeEEecCc
Confidence            2469999999874

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.80  E-value=6.4e-05  Score=55.83  Aligned_cols=77  Identities=10%  Similarity=0.100  Sum_probs=54.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|++|||+||++++|..+++.....|++|+.++ ++++. +..+++      |..   ..+|.++.+  -.+    ++++
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~-~~~~~l------Ga~---~vi~~~~~d--~~~----~v~~   91 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA-QSALKA------GAW---QVINYREED--LVE----RLKE   91 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHH-HHHHHH------TCS---EEEETTTSC--HHH----HHHH
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHH-HHHHhc------CCe---EEEECCCCC--HHH----HHHH
Confidence            488999999999999999999999999999998 54444 334443      222   224777766  333    3333


Q ss_pred             Hh--CCCCEEEEcCCC
Q 024517           83 IL--GNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~--g~id~li~~ag~   96 (266)
                      ..  ..+|+++.+.|.
T Consensus        92 ~t~g~g~d~v~d~~g~  107 (179)
T d1qora2          92 ITGGKKVRVVYDSVGR  107 (179)
T ss_dssp             HTTTCCEEEEEECSCG
T ss_pred             HhCCCCeEEEEeCccH
Confidence            22  358999999875

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.80  E-value=3.6e-05  Score=56.91  Aligned_cols=74  Identities=16%  Similarity=0.276  Sum_probs=52.0

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|++||.|+ ||.+++++..|.+.|++++++. +.++.+++.+.+...    ..+..  .+..+.+           
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~----~~~~~--~~~~~~~-----------   76 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT----GSIQA--LSMDELE-----------   76 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG----SSEEE--CCSGGGT-----------
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhc----ccccc--ccccccc-----------
Confidence            468999999998 5689999999999999988888 556666666665433    22222  2222211           


Q ss_pred             HHHhCCCCEEEEcCCC
Q 024517           81 CQILGNLDAFVHCYTY   96 (266)
Q Consensus        81 ~~~~g~id~li~~ag~   96 (266)
                         ..+.|++||+...
T Consensus        77 ---~~~~dliIN~Tp~   89 (170)
T d1nyta1          77 ---GHEFDLIINATSS   89 (170)
T ss_dssp             ---TCCCSEEEECCSC
T ss_pred             ---ccccceeeccccc
Confidence               1368999999755

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.78  E-value=0.00017  Score=51.70  Aligned_cols=117  Identities=17%  Similarity=0.223  Sum_probs=68.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcC--CeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRG--CRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g--~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +++++.|.|+ |.+|..+|..|+.+|  .+|+++| ++++.+.....+...............|..+             
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~~-------------   69 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSD-------------   69 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGG-------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHHH-------------
Confidence            4567888896 889999999999998  4899999 7666655555554321111233333333221             


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                         ...-|++|.++|.. . .+     ..+-...+..|    ..+.+...+.+.+....+.++++|.+
T Consensus        70 ---~~~adivvitag~~-~-~~-----g~~r~~l~~~N----~~i~~~~~~~i~~~~p~aivivvtNP  123 (146)
T d1ez4a1          70 ---CKDADLVVITAGAP-Q-KP-----GESRLDLVNKN----LNILSSIVKPVVDSGFDGIFLVAANP  123 (146)
T ss_dssp             ---GTTCSEEEECCCC-----------------CHHHH----HHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred             ---hccccEEEEecccc-c-CC-----CCCHHHHHHHH----HHHHHHHHHHHhhcCCCcEEEEeCCc
Confidence               13579999999862 2 11     11122233333    45666677766666545666666653

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.76  E-value=6e-05  Score=56.21  Aligned_cols=77  Identities=13%  Similarity=0.100  Sum_probs=52.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +|++|||+||++++|...++.+...|++|+++. ++++. +   .+++.   +.. .  ..|-.+.+      +.+++.+
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~-~---~l~~~---Ga~-~--vi~~~~~~------~~~~v~~   88 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR-E---MLSRL---GVE-Y--VGDSRSVD------FADEILE   88 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH-H---HHHTT---CCS-E--EEETTCST------HHHHHHH
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccc-c---ccccc---ccc-c--cccCCccC------HHHHHHH
Confidence            478999999999999999999989999999888 44332 2   33322   223 1  24556655      3334444


Q ss_pred             Hh--CCCCEEEEcCCC
Q 024517           83 IL--GNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~--g~id~li~~ag~   96 (266)
                      ..  .++|+++.++|.
T Consensus        89 ~t~~~g~d~v~d~~g~  104 (183)
T d1pqwa_          89 LTDGYGVDVVLNSLAG  104 (183)
T ss_dssp             HTTTCCEEEEEECCCT
T ss_pred             HhCCCCEEEEEecccc
Confidence            33  359999999874

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.76  E-value=2.3e-05  Score=58.32  Aligned_cols=105  Identities=21%  Similarity=0.140  Sum_probs=66.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +|.+|||+||+||+|...++.....|++|+.+.++++..+.++++      +.+..+   |-++..    .+....+  .
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~l------Ga~~vi---~~~~~~----~~~~~~~--~   95 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVL------GAKEVL---AREDVM----AERIRPL--D   95 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHT------TCSEEE---ECC-------------C--C
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhc------ccceee---ecchhH----HHHHHHh--h
Confidence            478899999999999999999889999999988544445555554      233222   322211    1111111  1


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccccc
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER  153 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~  153 (266)
                      -+++|+++.+.|.. .                          ....+..++.   +|+++.++...+...
T Consensus        96 ~~gvD~vid~vgg~-~--------------------------~~~~l~~l~~---~Griv~~G~~~g~~~  135 (176)
T d1xa0a2          96 KQRWAAAVDPVGGR-T--------------------------LATVLSRMRY---GGAVAVSGLTGGAEV  135 (176)
T ss_dssp             SCCEEEEEECSTTT-T--------------------------HHHHHHTEEE---EEEEEECSCCSSSCC
T ss_pred             ccCcCEEEEcCCch-h--------------------------HHHHHHHhCC---CceEEEeecccCccc
Confidence            24799999999862 1                          2334444544   689999998765443

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.75  E-value=0.00013  Score=53.64  Aligned_cols=82  Identities=16%  Similarity=0.208  Sum_probs=55.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      .|.+++|+| +|++|...++.+...|++|+++++.+...+.++++      +... .+..|-.+.+   .....+++.+.
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~------ga~~-~~~~~~~~~~---~~~~~~~~~~~   94 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNC------GADV-TLVVDPAKEE---ESSIIERIRSA   94 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT------TCSE-EEECCTTTSC---HHHHHHHHHHH
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHc------CCcE-EEeccccccc---cchhhhhhhcc
Confidence            478899997 67899999999989999999999433333444443      2232 2333433333   44555666665


Q ss_pred             hC-CCCEEEEcCCC
Q 024517           84 LG-NLDAFVHCYTY   96 (266)
Q Consensus        84 ~g-~id~li~~ag~   96 (266)
                      .| .+|++|.++|.
T Consensus        95 ~g~g~D~vid~~g~  108 (170)
T d1e3ja2          95 IGDLPNVTIDCSGN  108 (170)
T ss_dssp             SSSCCSEEEECSCC
T ss_pred             cccCCceeeecCCC
Confidence            54 59999999975

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.72  E-value=0.00017  Score=52.58  Aligned_cols=72  Identities=19%  Similarity=0.250  Sum_probs=51.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      +++++++||.|+ |++|..+++.|..+|+ ++.++. +.++.+++++++.        ...  .   ..+  ++...+  
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~--------~~~--~---~~~--~~~~~l--   82 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG--------GEA--V---RFD--ELVDHL--   82 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT--------CEE--C---CGG--GHHHHH--
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh--------ccc--c---cch--hHHHHh--
Confidence            478999999998 8899999999999999 577777 4466666666542        111  1   223  333333  


Q ss_pred             HHHHhCCCCEEEEcCCC
Q 024517           80 ACQILGNLDAFVHCYTY   96 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~   96 (266)
                           ...|++|++.+.
T Consensus        83 -----~~~Divi~atss   94 (159)
T d1gpja2          83 -----ARSDVVVSATAA   94 (159)
T ss_dssp             -----HTCSEEEECCSS
T ss_pred             -----ccCCEEEEecCC
Confidence                 368999999875

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.72  E-value=4.7e-05  Score=56.30  Aligned_cols=75  Identities=17%  Similarity=0.264  Sum_probs=49.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++|+++|.|+ |.+|+.+|+.|.++|++|++++ +.++.+++.+.+       ........+.....  .....+     
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~-------~~~~~~~~~~~~~~--~~~~~i-----   65 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV-------QHSTPISLDVNDDA--ALDAEV-----   65 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC-------TTEEEEECCTTCHH--HHHHHH-----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc-------cccccccccccchh--hhHhhh-----
Confidence            4789999987 7899999999999999999999 555555544332       23344444444433  332322     


Q ss_pred             HhCCCCEEEEcCC
Q 024517           83 ILGNLDAFVHCYT   95 (266)
Q Consensus        83 ~~g~id~li~~ag   95 (266)
                        ...|.++....
T Consensus        66 --~~~~~~i~~~~   76 (182)
T d1e5qa1          66 --AKHDLVISLIP   76 (182)
T ss_dssp             --TTSSEEEECSC
T ss_pred             --hccceeEeecc
Confidence              35677776653

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.70  E-value=0.00012  Score=54.12  Aligned_cols=74  Identities=16%  Similarity=0.230  Sum_probs=53.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++++|+++|.|+ ||.+++++..|.+.+.+|+++. +.++.+++++.+...    ..+..+..|  +..           
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~----~~~~~~~~~--~~~-----------   76 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY----GNIQAVSMD--SIP-----------   76 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG----SCEEEEEGG--GCC-----------
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc----cccchhhhc--ccc-----------
Confidence            357899999987 5589999999998888999998 667777777777543    233333322  211           


Q ss_pred             HHHhCCCCEEEEcCCC
Q 024517           81 CQILGNLDAFVHCYTY   96 (266)
Q Consensus        81 ~~~~g~id~li~~ag~   96 (266)
                         ....|++||+...
T Consensus        77 ---~~~~diiIN~tp~   89 (171)
T d1p77a1          77 ---LQTYDLVINATSA   89 (171)
T ss_dssp             ---CSCCSEEEECCCC
T ss_pred             ---ccccceeeecccc
Confidence               1468999999865

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.69  E-value=0.00059  Score=48.91  Aligned_cols=118  Identities=19%  Similarity=0.226  Sum_probs=72.6

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccC-CCCCeEEEEEecCCCchHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLK-GGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      ..++++.|+|+ |.+|..+|..++.+|.  ++++.| ++++++.....+..... ....+.+...|..+           
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~-----------   71 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDD-----------   71 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGG-----------
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHHH-----------
Confidence            35678889997 8899999999999985  699999 76666665555543211 12233333333221           


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                           ...-|++|.++|....  + .+...+.+    .    ....+.+.+.+.+.+..+.+.++++|.+
T Consensus        72 -----l~daDvvvitag~~~~--~-~~~R~dl~----~----~N~~i~~~i~~~i~~~~p~a~~ivvtNP  125 (148)
T d1ldna1          72 -----CRDADLVVICAGANQK--P-GETRLDLV----D----KNIAIFRSIVESVMASGFQGLFLVATNP  125 (148)
T ss_dssp             -----TTTCSEEEECCSCCCC--T-TTCSGGGH----H----HHHHHHHHHHHHHHHHTCCSEEEECSSS
T ss_pred             -----hccceeEEEecccccc--c-CcchhHHH----H----HHHHHHHHHHHHHHhhCCCceEEEecCc
Confidence                 1357999999987321  1 11111212    2    3345666777776665546778877764

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.60  E-value=8.6e-05  Score=55.76  Aligned_cols=86  Identities=14%  Similarity=0.144  Sum_probs=55.6

Q ss_pred             CcEEEE-ecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            5 AKRVLL-TSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         5 ~k~vlI-tGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      |.+++| +||++++|.+.++..-..|++|+.+. +.+..++..+.+.+.   |... ++..|-.+..  +....+.++..
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~l---Gad~-vi~~~~~~~~--~~~~~v~~~~~  102 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL---GATQ-VITEDQNNSR--EFGPTIKEWIK  102 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH---TCSE-EEEHHHHHCG--GGHHHHHHHHH
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhc---cccE-EEeccccchh--HHHHHHHHHHh
Confidence            454555 79999999999998888899999877 666666666666544   2232 2222222333  34444555444


Q ss_pred             H-hCCCCEEEEcCCC
Q 024517           83 I-LGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~-~g~id~li~~ag~   96 (266)
                      . .+.+|+++.+.|.
T Consensus       103 ~~g~~vdvv~D~vg~  117 (189)
T d1gu7a2         103 QSGGEAKLALNCVGG  117 (189)
T ss_dssp             HHTCCEEEEEESSCH
T ss_pred             hccCCceEEEECCCc
Confidence            3 3579999999874

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.57  E-value=7.5e-05  Score=47.29  Aligned_cols=43  Identities=19%  Similarity=0.237  Sum_probs=34.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEK   47 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~   47 (266)
                      ++.++||+||++|+|....+.+...|++|+.+. ++++. +..++
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~-~~~~~   74 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH-EYLKS   74 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH-HHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHH-HHHHH
Confidence            577899999999999999998888899999887 54444 44443

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.52  E-value=0.00035  Score=51.88  Aligned_cols=80  Identities=14%  Similarity=0.179  Sum_probs=53.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|.++||+|+ |+||...++.+...|+ +|+++++.+...+.++++      |...   ..|.++.+   .....+++.+
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~l------Ga~~---vi~~~~~~---~~~~~~~i~~   94 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI------GADL---TLNRRETS---VEERRKAIMD   94 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT------TCSE---EEETTTSC---HHHHHHHHHH
T ss_pred             CCCEEEEECC-Cccchhheecccccccccccccccccccccccccc------cceE---EEeccccc---hHHHHHHHHH
Confidence            5889999987 7899999999999998 788888433333444444      2222   23666544   3334444554


Q ss_pred             Hh--CCCCEEEEcCCC
Q 024517           83 IL--GNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~--g~id~li~~ag~   96 (266)
                      ..  ..+|++|.++|.
T Consensus        95 ~~~~~g~Dvvid~vG~  110 (182)
T d1vj0a2          95 ITHGRGADFILEATGD  110 (182)
T ss_dssp             HTTTSCEEEEEECSSC
T ss_pred             hhCCCCceEEeecCCc
Confidence            43  249999999876

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.50  E-value=0.0006  Score=48.50  Aligned_cols=114  Identities=17%  Similarity=0.139  Sum_probs=65.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ++.|+|+ |.+|..+|..++.++.  ++++.| +++..+.....+.....-.........   +.+             .
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~-------------~   65 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYS-------------D   65 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG-------------G
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHH-------------H
Confidence            4566686 9999999999999976  799999 777776666666543221122222221   111             1


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                      ...-|++|..||.. . .+  ..+   -...+..|    ..+.+.+.+.+.+...++.++.+|.+
T Consensus        66 ~~~adivvitag~~-~-~~--~~~---r~~l~~~N----~~i~~~i~~~i~~~~p~ai~ivvtNP  119 (142)
T d1y6ja1          66 VKDCDVIVVTAGAN-R-KP--GET---RLDLAKKN----VMIAKEVTQNIMKYYNHGVILVVSNP  119 (142)
T ss_dssp             GTTCSEEEECCCC----------C---HHHHHHHH----HHHHHHHHHHHHHHCCSCEEEECSSS
T ss_pred             hCCCceEEEecccc-c-Cc--Ccc---hhHHhhHH----HHHHHHHHHHhhccCCCceEEEecCh
Confidence            23579999999863 2 11  122   23334444    45666777777665545777777664

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.49  E-value=0.00023  Score=54.78  Aligned_cols=78  Identities=18%  Similarity=0.226  Sum_probs=55.8

Q ss_pred             CCCCcEEEEecC----------------CCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEec
Q 024517            2 ENQAKRVLLTSD----------------GDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDM   65 (266)
Q Consensus         2 ~l~~k~vlItGa----------------~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   65 (266)
                      +|+|++||||+|                ||..|.++|+++..+|++|.++..+...         ..+  ..+..+.  +
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~---------~~p--~~~~~~~--~   69 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL---------PTP--PFVKRVD--V   69 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC---------CCC--TTEEEEE--C
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc---------Ccc--cccccce--e
Confidence            589999999998                5789999999999999999988722211         011  2344433  2


Q ss_pred             CCCchHHHHHHHHHHHHHhCCCCEEEEcCCCC
Q 024517           66 EEDREGAFDEAVDKACQILGNLDAFVHCYTYE   97 (266)
Q Consensus        66 ~~~~~~~v~~~~~~~~~~~g~id~li~~ag~~   97 (266)
                      .     +...+.+.+.+.+...|++|++|.+.
T Consensus        70 ~-----t~~~m~~~~~~~~~~~D~~i~aAAvs   96 (223)
T d1u7za_          70 M-----TALEMEAAVNASVQQQNIFIGCAAVA   96 (223)
T ss_dssp             C-----SHHHHHHHHHHHGGGCSEEEECCBCC
T ss_pred             h-----hhHHHHHHHHhhhccceeEeeeechh
Confidence            2     34456666666777889999999873

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=0.00069  Score=49.66  Aligned_cols=80  Identities=19%  Similarity=0.258  Sum_probs=52.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .+.+++|.|+ |++|...++.+...|+ +|+++++.+...+.++++      |... +  .+..+.   +.....+.+..
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~------Ga~~-~--~~~~~~---~~~~~~~~~~~   92 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI------GADL-V--LQISKE---SPQEIARKVEG   92 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT------TCSE-E--EECSSC---CHHHHHHHHHH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHh------CCcc-c--cccccc---ccccccccccc
Confidence            4778999986 8999999999999999 788888444334444444      2222 1  123322   33444555555


Q ss_pred             HhC-CCCEEEEcCCC
Q 024517           83 ILG-NLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g-~id~li~~ag~   96 (266)
                      .++ .+|++|.++|.
T Consensus        93 ~~g~g~Dvvid~~G~  107 (171)
T d1pl8a2          93 QLGCKPEVTIECTGA  107 (171)
T ss_dssp             HHTSCCSEEEECSCC
T ss_pred             cCCCCceEEEeccCC
Confidence            554 69999999985

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.47  E-value=0.0001  Score=51.97  Aligned_cols=71  Identities=13%  Similarity=0.268  Sum_probs=52.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      +++|.|+ |.+|+.+++.|.++|+.|++++ +++..++..++        ....++..|.++++  ..+++      ...
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~--------~~~~vi~Gd~~~~~--~l~~~------~i~   64 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE--------IDALVINGDCTKIK--TLEDA------GIE   64 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--------CSSEEEESCTTSHH--HHHHT------TTT
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhh--------hhhhhccCcccchh--hhhhc------Chh
Confidence            5788998 7799999999999999999999 66655554433        24567888999877  33322      123


Q ss_pred             CCCEEEEcC
Q 024517           86 NLDAFVHCY   94 (266)
Q Consensus        86 ~id~li~~a   94 (266)
                      ..|.++...
T Consensus        65 ~a~~vv~~t   73 (132)
T d1lssa_          65 DADMYIAVT   73 (132)
T ss_dssp             TCSEEEECC
T ss_pred             hhhhhcccC
Confidence            578888764

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.43  E-value=0.00024  Score=52.30  Aligned_cols=73  Identities=15%  Similarity=0.235  Sum_probs=49.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|+++||+||++++|...++.....|++|+.++ ++++.+ ..+++      |....   .|..+    ..    ++.. 
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~-~~~~l------Ga~~~---i~~~~----~~----~~~~-   87 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA-LPLAL------GAEEA---ATYAE----VP----ERAK-   87 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSH-HHHHT------TCSEE---EEGGG----HH----HHHH-
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccccccccc-ccccc------cccee---eehhh----hh----hhhh-
Confidence            688999999999999999998888899999888 555544 33333      22221   24332    22    1222 


Q ss_pred             HhCCCCEEEEcCC
Q 024517           83 ILGNLDAFVHCYT   95 (266)
Q Consensus        83 ~~g~id~li~~ag   95 (266)
                      ...++|+++.+.|
T Consensus        88 ~~~g~D~v~d~~G  100 (171)
T d1iz0a2          88 AWGGLDLVLEVRG  100 (171)
T ss_dssp             HTTSEEEEEECSC
T ss_pred             ccccccccccccc
Confidence            2356999999765

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.39  E-value=0.0003  Score=52.56  Aligned_cols=78  Identities=12%  Similarity=0.239  Sum_probs=51.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEE-Ee-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVL-VG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +++|||+||+||+|...++..-..|+++++ ++ ++++..++.+++      +..   ...|..+.+   ..+.++++. 
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~------gad---~vi~~~~~~---~~~~~~~~~-   97 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL------GFD---AAVNYKTGN---VAEQLREAC-   97 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS------CCS---EEEETTSSC---HHHHHHHHC-
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc------cce---EEeeccchh---HHHHHHHHh-
Confidence            478999999999999999988888996554 44 555555554443      122   234677665   333333332 


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                       ...+|+++.+.|.
T Consensus        98 -~~GvDvv~D~vGg  110 (187)
T d1vj1a2          98 -PGGVDVYFDNVGG  110 (187)
T ss_dssp             -TTCEEEEEESSCH
T ss_pred             -ccCceEEEecCCc
Confidence             1359999999874

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.36  E-value=0.0015  Score=46.45  Aligned_cols=116  Identities=12%  Similarity=0.148  Sum_probs=67.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ++.|+||+|.+|.++|..++.+|.  ++++.| +..  +.....+...    ........-+. ..  +..+.+      
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~--~~~a~Dl~~~----~~~~~~~~~~~-~~--~~~~~~------   66 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT--PGVAADLSHI----ETRATVKGYLG-PE--QLPDCL------   66 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH--HHHHHHHTTS----SSSCEEEEEES-GG--GHHHHH------
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEecccc--chhhHHHhhh----hhhcCCCeEEc-CC--ChHHHh------
Confidence            688999999999999999999886  688888 543  2223333321    11112222222 22  222222      


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                       ..-|++|..+|.. . .+  .++.   ...++.|.    .+.+.+.+.+.+...++.++.+|.+.
T Consensus        67 -~~aDivVitag~~-~-~~--g~sR---~~ll~~N~----~i~~~i~~~i~~~~p~~iiivvtNPv  120 (144)
T d1mlda1          67 -KGCDVVVIPAGVP-R-KP--GMTR---DDLFNTNA----TIVATLTAACAQHCPDAMICIISNPV  120 (144)
T ss_dssp             -TTCSEEEECCSCC-C-CT--TCCG---GGGHHHHH----HHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred             -CCCCEEEECCCcC-C-CC--CCCc---chHHHHHH----HHHHHHHHHHHhcCCCeEEEEecCch
Confidence             4689999999862 2 22  1222   22333443    45566666666655467888888753

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.34  E-value=0.0034  Score=44.30  Aligned_cols=114  Identities=13%  Similarity=0.172  Sum_probs=68.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ++.|.|+ |++|..++..++.++.  ++++.| ++++++.....+....+-.........   +.+  +    +      
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~---~~~--~----~------   65 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG---DYA--D----L------   65 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEEC---CGG--G----G------
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCC---cHH--H----h------
Confidence            4667786 8899999999998874  799999 776666555555432211123333322   222  1    1      


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                       ..-|++|.++|....    ...+..+   .+..|    ..+.+.+.+.+.+..+++.++++|.+
T Consensus        66 -~~adivvitag~~~~----~g~~r~d---l~~~N----~~I~~~i~~~i~~~~p~aivivvtNP  118 (140)
T d1a5za1          66 -KGSDVVIVAAGVPQK----PGETRLQ---LLGRN----ARVMKEIARNVSKYAPDSIVIVVTNP  118 (140)
T ss_dssp             -TTCSEEEECCCCCCC----SSCCHHH---HHHHH----HHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             -cCCCEEEEecccccC----CCcchhh---hhccc----cchHHHHHHHHHhcCCCcEEEEeCCc
Confidence             357999999987321    1233322   23333    34677777777776546777776654

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.34  E-value=0.001  Score=47.47  Aligned_cols=119  Identities=16%  Similarity=0.214  Sum_probs=70.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCC-CCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKG-GQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      |++.|+|+ |.+|..+|..++.+|.  ++++.| ++++++.....+...... ........   .+.+  .    +    
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~---~d~~--~----l----   67 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDWA--A----L----   67 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCGG--G----G----
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceec---cCHH--H----h----
Confidence            67778895 8899999999999984  799999 777666555555433211 12333332   2222  1    1    


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                         ..-|++|.+||.......   ....+-...++.    ...+.+.+.+.+.+...++.++.+|.+
T Consensus        68 ---~~adiVVitaG~~~~~~~---~~g~~R~~l~~~----N~~i~~~i~~~i~~~~p~aivivvtNP  124 (146)
T d1hyha1          68 ---ADADVVISTLGNIKLQQD---NPTGDRFAELKF----TSSMVQSVGTNLKESGFHGVLVVISNP  124 (146)
T ss_dssp             ---TTCSEEEECCSCGGGTC----------CTTHHH----HHHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred             ---ccccEEEEeccccccccc---cCCccHHHHHHH----HHHHHHHHHHHHhhcCCCeEEEEecCc
Confidence               257999999986321111   111111122233    345667777777766546777777764

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.33  E-value=0.0026  Score=45.99  Aligned_cols=119  Identities=13%  Similarity=0.096  Sum_probs=74.1

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhccc-CCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSL-KGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      +..+++.|.|+ |.+|..+|..++.+|.  ++++.| +++..+..+..+.... ..........   .+.+  .      
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~---~d~~--~------   85 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVAD---KDYS--V------   85 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEEC---SSGG--G------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEec---cchh--h------
Confidence            35678888896 8899999999999986  799999 7666665555554321 1112222222   2222  1      


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                           ...-|++|..||.. . .+  ..+..   ..+    .....+.+.+.+.+.+...++.++++|.+.
T Consensus        86 -----~~~adiVVitAg~~-~-~~--g~tR~---~l~----~~N~~i~~~i~~~i~~~~p~aiiivvtNPv  140 (160)
T d1i0za1          86 -----TANSKIVVVTAGVR-Q-QE--GESRL---NLV----QRNVNVFKFIIPQIVKYSPDCIIIVVSNPV  140 (160)
T ss_dssp             -----GTTCSEEEECCSCC-C-CT--TCCGG---GGH----HHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred             -----cccccEEEEecCCc-c-cc--CcchH---HHH----HHHHHHHHHHHHHHHhcCCCcEEEEeCCch
Confidence                 13679999999973 2 11  12221   122    234557788888877766567888888753

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.32  E-value=0.0016  Score=47.09  Aligned_cols=118  Identities=14%  Similarity=0.150  Sum_probs=71.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCC-CCCeEEEEEecCCCchHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKG-GQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      ++..++.|+|+ |.+|..+|..++.+|.  ++++.| +.+.++..+..+...... +........|..+.          
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~~----------   85 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNVS----------   85 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGGG----------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhhh----------
Confidence            34456888886 8899999999999976  799999 766666666566533211 12222222222211          


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           79 KACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                            ..-|++|..||.. ........  +.        +.....+.+.+.+.+.+...++.++.+|.+
T Consensus        86 ------~~adivvitag~~-~~~~~~R~--dl--------l~~N~~i~~~i~~~i~~~~p~~ivivvtNP  138 (159)
T d2ldxa1          86 ------ANSKLVIITAGAR-MVSGQTRL--DL--------LQRNVAIMKAIVPGVIQNSPDCKIIVVTNP  138 (159)
T ss_dssp             ------TTEEEEEECCSCC-CCTTTCSS--CT--------THHHHHHHHHHTTTHHHHSTTCEEEECSSS
T ss_pred             ------ccccEEEEecccc-cCCCCCHH--HH--------HHHHHHHHHHHHHHHhccCCCeEEEEeCCc
Confidence                  3579999999873 22211111  11        223445567777777666656888888774

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.28  E-value=0.00059  Score=49.94  Aligned_cols=80  Identities=11%  Similarity=0.095  Sum_probs=52.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .+.+++|+|+++++|..+++.+...|+ +|+++++.+...+..+++      |..   ...|.++.+  ..++..+... 
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~------Ga~---~~i~~~~~~--~~~~~~~~~~-   94 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA------GAD---YVINASMQD--PLAEIRRITE-   94 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH------TCS---EEEETTTSC--HHHHHHHHTT-
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHc------CCc---eeeccCCcC--HHHHHHHHhh-
Confidence            477999999999999999999999996 777777333333344443      222   224566655  4334332221 


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                       -+.+|+++.++|.
T Consensus        95 -~~~~d~vid~~g~  107 (170)
T d1jvba2          95 -SKGVDAVIDLNNS  107 (170)
T ss_dssp             -TSCEEEEEESCCC
T ss_pred             -cccchhhhccccc
Confidence             1359999999875

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.27  E-value=0.00088  Score=49.27  Aligned_cols=77  Identities=12%  Similarity=0.170  Sum_probs=50.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEE-EecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVL-VGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|.+++|.|+ +++|...++.+...|+++++ +++.+...+.++++      +.. .+  .|.++.+  .    .+++.+
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~------Ga~-~~--i~~~~~~--~----~~~i~~   91 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL------GAT-HV--INSKTQD--P----VAAIKE   91 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH------TCS-EE--EETTTSC--H----HHHHHH
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHc------CCe-EE--EeCCCcC--H----HHHHHH
Confidence            5778999987 79999999999889996654 45444334444444      222 22  4666654  2    333333


Q ss_pred             Hh-CCCCEEEEcCCC
Q 024517           83 IL-GNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~-g~id~li~~ag~   96 (266)
                      .. +++|++|.++|.
T Consensus        92 ~t~gg~D~vid~~G~  106 (174)
T d1f8fa2          92 ITDGGVNFALESTGS  106 (174)
T ss_dssp             HTTSCEEEEEECSCC
T ss_pred             HcCCCCcEEEEcCCc
Confidence            32 579999999986

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.19  E-value=0.0085  Score=42.23  Aligned_cols=115  Identities=10%  Similarity=0.052  Sum_probs=68.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cc--cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NE--RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++.|+|++|.+|.++|..+..++.  ++++.| ..  +..+.....+.....-.....+...|   .+  +         
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~--~---------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---YE--D---------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---GG--G---------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC---HH--H---------
Confidence            678999999999999999999986  688887 32  22322333333211111233333222   22  1         


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                        ...-|++|..||.. . .+  ..+.   ...++.    ...+.+.+.+.+.+...++.++.+|.+
T Consensus        68 --~~~aDiVvitaG~~-~-~~--g~~R---~dl~~~----N~~I~~~i~~~i~~~~p~~i~ivvtNP  121 (142)
T d1o6za1          68 --TAGSDVVVITAGIP-R-QP--GQTR---IDLAGD----NAPIMEDIQSSLDEHNDDYISLTTSNP  121 (142)
T ss_dssp             --GTTCSEEEECCCCC-C-CT--TCCH---HHHHHH----HHHHHHHHHHHHHTTCSCCEEEECCSS
T ss_pred             --hhhcCEEEEecccc-c-cc--CCch---hhHHHH----HHHHHHHHHHHHHhcCCCceEEEecCh
Confidence              13679999999862 2 11  1333   233333    345677788887776646777777664

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.17  E-value=0.00015  Score=51.06  Aligned_cols=72  Identities=14%  Similarity=0.182  Sum_probs=50.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      |.++|.|. |.+|+.+++.|.++|++|++++ ++++.++    +...     ....+..|.++++  ..+++      ..
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~----~~~~-----~~~~~~gd~~~~~--~l~~a------~i   62 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNA----YASY-----ATHAVIANATEEN--ELLSL------GI   62 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHH----TTTT-----CSEEEECCTTCTT--HHHHH------TG
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHH----HHHh-----CCcceeeecccch--hhhcc------CC
Confidence            56778876 5699999999999999999999 6554443    3322     3456678999988  43332      12


Q ss_pred             CCCCEEEEcCC
Q 024517           85 GNLDAFVHCYT   95 (266)
Q Consensus        85 g~id~li~~ag   95 (266)
                      .+.|.+|...+
T Consensus        63 ~~a~~vi~~~~   73 (134)
T d2hmva1          63 RNFEYVIVAIG   73 (134)
T ss_dssp             GGCSEEEECCC
T ss_pred             ccccEEEEEcC
Confidence            35788887764

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.11  E-value=0.0054  Score=43.48  Aligned_cols=117  Identities=15%  Similarity=0.191  Sum_probs=67.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHc-C--CeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKR-G--CRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~-g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ++.|+|++|.+|.++|..|..+ +  .++++.|..+..+..+..+....   .......  +...+  ..+ .+      
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~---~~~~~~~--~~~~~--~~~-~~------   67 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIP---TAVKIKG--FSGED--ATP-AL------   67 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSC---SSCEEEE--ECSSC--CHH-HH------
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCc---cccCCcE--EEcCC--Ccc-cc------
Confidence            4789999999999999988644 4  58999994344444444554321   1111111  22222  111 12      


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccc
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII  149 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~  149 (266)
                       ..-|++|..+|.. . ++  ..+..   ..+..|    ..+.+...+.+.+..+++.++.+|.+.
T Consensus        68 -~~aDvvvitaG~~-~-k~--g~~R~---dl~~~N----~~i~~~v~~~i~~~~p~aivivvtNPv  121 (145)
T d2cmda1          68 -EGADVVLISAGVR-R-KP--GMDRS---DLFNVN----AGIVKNLVQQVAKTCPKACIGIITNPV  121 (145)
T ss_dssp             -TTCSEEEECCSCC-C-CT--TCCGG---GGHHHH----HHHHHHHHHHHHHHCTTSEEEECSSSH
T ss_pred             -CCCCEEEECCCcc-C-CC--Ccchh---hHHHHH----HHHHHHHHHHHHhhCCCcEEEEccCCc
Confidence             2569999999873 2 21  12322   223334    445666666666655467788887753

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.09  E-value=0.0013  Score=48.43  Aligned_cols=77  Identities=14%  Similarity=0.102  Sum_probs=51.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|.+|+|.|+ |++|...++.+...|+ +|+++++.+...+.++++      |..   ..+|..+.+  -.    +++.+
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~l------Ga~---~~i~~~~~~--~~----~~v~~   90 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFY------GAT---DILNYKNGH--IE----DQVMK   90 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHH------TCS---EEECGGGSC--HH----HHHHH
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhh------Ccc---ccccccchh--HH----HHHHH
Confidence            5778999976 8999999999998998 688888444334455554      222   224666655  33    33333


Q ss_pred             Hh--CCCCEEEEcCCC
Q 024517           83 IL--GNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~--g~id~li~~ag~   96 (266)
                      ..  ..+|++|.++|.
T Consensus        91 ~t~g~G~D~vid~~g~  106 (174)
T d1jqba2          91 LTNGKGVDRVIMAGGG  106 (174)
T ss_dssp             HTTTSCEEEEEECSSC
T ss_pred             HhhccCcceEEEccCC
Confidence            32  249999999986

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.03  E-value=0.014  Score=41.17  Aligned_cols=115  Identities=17%  Similarity=0.185  Sum_probs=67.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ++.|+|+ |.+|.++|..++.+|.  ++++.| ++++.+.....++....-.....+...  .+.+      .+      
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~------~~------   67 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPE------IC------   67 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGG------GG------
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHH------Hh------
Confidence            4667786 8999999999999986  799999 666655544444432110112222211  1222      01      


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                       ..-|++|..+|...  .+  ..+..   ..+..|    ..+.+.+.+.+.+...++.++.+|.+
T Consensus        68 -~daDvVVitaG~~~--~~--g~~R~---dl~~~N----~~i~~~i~~~i~~~~p~ai~ivvtNP  120 (143)
T d1llda1          68 -RDADMVVITAGPRQ--KP--GQSRL---ELVGAT----VNILKAIMPNLVKVAPNAIYMLITNP  120 (143)
T ss_dssp             -TTCSEEEECCCCCC--CT--TCCHH---HHHHHH----HHHHHHHHHHHHHHCTTSEEEECCSS
T ss_pred             -hCCcEEEEeccccc--CC--CCchh---hhhhhh----HHHHHHHHHHHHhhCCCeEEEEeCCc
Confidence             24699999998621  11  23332   334444    35666666766666545777777764

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.02  E-value=0.0014  Score=48.01  Aligned_cols=80  Identities=10%  Similarity=0.113  Sum_probs=51.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCe-EEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCR-LVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|.+|+|.|++ |+|...++.+...|+. |+.+++.+...+.++++-      ..- +  .|..+.++ .+.+.+.+.  
T Consensus        28 ~G~tVlI~GaG-GvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lG------a~~-~--i~~~~~~~-~~~~~~~~~--   94 (176)
T d2fzwa2          28 PGSVCAVFGLG-GVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFG------ATE-C--INPQDFSK-PIQEVLIEM--   94 (176)
T ss_dssp             TTCEEEEECCS-HHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHT------CSE-E--ECGGGCSS-CHHHHHHHH--
T ss_pred             CCCEEEEecch-hHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhC------CcE-E--EeCCchhh-HHHHHHHHH--
Confidence            57899999985 8999999999999985 555555555566666652      222 2  24433221 333444332  


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                      ..+.+|+++.++|.
T Consensus        95 ~~~g~D~vid~~G~  108 (176)
T d2fzwa2          95 TDGGVDYSFECIGN  108 (176)
T ss_dssp             TTSCBSEEEECSCC
T ss_pred             cCCCCcEeeecCCC
Confidence            12469999999875

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.00  E-value=0.0026  Score=46.79  Aligned_cols=79  Identities=9%  Similarity=0.151  Sum_probs=51.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .|.+|+|+|+ +|+|...++.+...|+ +|+.++ +++++ +.++++      |....+   |..+.+. ..+...+.. 
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl-~~Ak~~------GA~~~i---n~~~~~~-~~~~~~~~~-   95 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKF-EKAMAV------GATECI---SPKDSTK-PISEVLSEM-   95 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHH------TCSEEE---CGGGCSS-CHHHHHHHH-
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHH-HHHHhc------CCcEEE---Cccccch-HHHHHHHHh-
Confidence            5889999986 7899999999999996 799999 55554 455555      233222   4444330 122222221 


Q ss_pred             HHhCCCCEEEEcCCC
Q 024517           82 QILGNLDAFVHCYTY   96 (266)
Q Consensus        82 ~~~g~id~li~~ag~   96 (266)
                       ..+.+|++|.+.|.
T Consensus        96 -~g~G~d~vi~~~g~  109 (176)
T d1d1ta2          96 -TGNNVGYTFEVIGH  109 (176)
T ss_dssp             -HTSCCCEEEECSCC
T ss_pred             -ccccceEEEEeCCc
Confidence             12469999999876

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.99  E-value=0.00042  Score=47.25  Aligned_cols=35  Identities=23%  Similarity=0.384  Sum_probs=32.5

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      ++++||++||.|++. +|..-++.|++.|++|++.+
T Consensus         8 l~l~~k~vlVvG~G~-va~~ka~~ll~~ga~v~v~~   42 (113)
T d1pjqa1           8 CQLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNA   42 (113)
T ss_dssp             ECCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEE
T ss_pred             EEeCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEe
Confidence            468999999999987 99999999999999999887

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.98  E-value=0.003  Score=45.74  Aligned_cols=76  Identities=9%  Similarity=0.195  Sum_probs=48.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|.+++|.|+ +++|...++.+...|++|++++ +++++ +.++++      |...   ..|.++.+  ..+++    .+
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~-~~a~~~------Ga~~---~i~~~~~~--~~~~~----~~   89 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKL-ELARKL------GASL---TVNARQED--PVEAI----QR   89 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHT------TCSE---EEETTTSC--HHHHH----HH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHH-Hhhhcc------Cccc---cccccchh--HHHHH----HH
Confidence            5789999886 8899999988888899999998 44443 344443      2222   24666665  43333    33


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                      ..+..+..|.+++.
T Consensus        90 ~~~g~~~~i~~~~~  103 (166)
T d1llua2          90 DIGGAHGVLVTAVS  103 (166)
T ss_dssp             HHSSEEEEEECCSC
T ss_pred             hhcCCccccccccc
Confidence            33456666666543

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.98  E-value=0.00037  Score=45.76  Aligned_cols=34  Identities=18%  Similarity=0.179  Sum_probs=31.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      +++||+++|.|.+. .|.++|+.|.++|++|.+.|
T Consensus         2 ~~~~K~v~ViGlG~-sG~s~a~~L~~~g~~v~~~D   35 (93)
T d2jfga1           2 DYQGKNVVIIGLGL-TGLSCVDFFLARGVTPRVMD   35 (93)
T ss_dssp             CCTTCCEEEECCSH-HHHHHHHHHHHTTCCCEEEE
T ss_pred             CcCCCEEEEEeECH-HHHHHHHHHHHCCCEEEEee
Confidence            57899999999854 79999999999999999999

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.98  E-value=0.0013  Score=47.04  Aligned_cols=84  Identities=8%  Similarity=0.114  Sum_probs=54.6

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      |+.+=|++.|.||.|.+|..+|+.|.++|++|.+.+ +.....+..  +.     .....+..   ....  ++...+.+
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~--~~-----~~~~v~~~---~~~~--~~~~v~~~   72 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI--LA-----NADVVIVS---VPIN--LTLETIER   72 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH--HT-----TCSEEEEC---SCGG--GHHHHHHH
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh--hh-----hccccccc---cchh--hheeeeec
Confidence            556678999999999999999999999999999999 444333322  11     13333332   2334  56666766


Q ss_pred             HHHHhCCCCEEEEcCCC
Q 024517           80 ACQILGNLDAFVHCYTY   96 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~   96 (266)
                      +.....+=.+++..++.
T Consensus        73 ~~~~~~~~~iiiD~~Sv   89 (152)
T d2pv7a2          73 LKPYLTENMLLADLTSV   89 (152)
T ss_dssp             HGGGCCTTSEEEECCSC
T ss_pred             ccccccCCceEEEeccc
Confidence            65554333456666543

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.97  E-value=0.0031  Score=44.59  Aligned_cols=115  Identities=18%  Similarity=0.195  Sum_probs=67.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccC-CCCCeEEEEE-ecCCCchHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLK-GGQPVEVVGL-DMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~-D~~~~~~~~v~~~~~~~~   81 (266)
                      |++.|+|+ |.+|.++|..|+.++. ++++.| +++..+.....+..... ......+..+ |..+.             
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~~-------------   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADT-------------   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGG-------------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHHh-------------
Confidence            46677786 8899999999999886 899999 77665555544432110 0122222221 22221             


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                         ..-|++|-+||.... .   ..+   -...+..|    ..+.+...+.+.+..+++.++.+|.+
T Consensus        68 ---~~advvvitag~~~~-~---~~~---r~dl~~~N----~~i~~~i~~~i~k~~p~aivivvtNP  120 (142)
T d1uxja1          68 ---ANSDVIVVTSGAPRK-P---GMS---REDLIKVN----ADITRACISQAAPLSPNAVIIMVNNP  120 (142)
T ss_dssp             ---TTCSEEEECCSCC----------------CHHHH----HHHHHHHHHHHGGGCTTCEEEECSSS
T ss_pred             ---cCCCEEEEeeeccCC-c---Ccc---hhHHHhHH----HHHHHHHHHHHhccCCCceEEEeCCc
Confidence               257999999987321 1   111   12223333    35778888888776646777776653

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.91  E-value=0.03  Score=39.38  Aligned_cols=116  Identities=20%  Similarity=0.254  Sum_probs=64.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEecccc---cHHHHHHHhcccC-CCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC--RLVLVGNERR---LSSVAEKMMGSLK-GGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~--~v~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++.|+||+|.+|..+|..++.+|.  ++++.+..+.   .+.....+..... ....+.....--.+.+           
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~-----------   70 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLR-----------   70 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHH-----------
Confidence            488999999999999999999984  8999983332   3333444432211 1122332221111221           


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEec
Q 024517           81 CQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTS  147 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss  147 (266)
                        .+..-|++|-+||.. .   ....+..   ..++.|.    .+.+.+.+.+.+.. +..|+.+|.
T Consensus        71 --~l~~aDvVVitAG~~-~---~~g~sR~---dl~~~Na----~iv~~i~~~i~~~~-~~~iivVtN  123 (145)
T d1hyea1          71 --IIDESDVVIITSGVP-R---KEGMSRM---DLAKTNA----KIVGKYAKKIAEIC-DTKIFVITN  123 (145)
T ss_dssp             --GGTTCSEEEECCSCC-C---CTTCCHH---HHHHHHH----HHHHHHHHHHHHHC-CCEEEECSS
T ss_pred             --HhccceEEEEecccc-c---CCCCChh---hhhhhhH----HHHHHHHHHHhccC-CCeEEEEcC
Confidence              113579999999872 2   1123332   3344443    45666666665544 344554533

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.88  E-value=0.0022  Score=47.05  Aligned_cols=80  Identities=11%  Similarity=0.147  Sum_probs=50.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|.+|+|.|+ +|+|...+..+...|+ +|+++++.+...+...++      +....   .|..+.++ .+.+..+..  
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~------Ga~~~---i~~~~~~~-~~~~~~~~~--   94 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV------GATEC---VNPQDYKK-PIQEVLTEM--   94 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT------TCSEE---ECGGGCSS-CHHHHHHHH--
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHh------CCeeE---EecCCchh-HHHHHHHHH--
Confidence            5789999999 6799999999999987 677777444445555554      12211   23333220 333333333  


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                      ..+.+|++|.+.|.
T Consensus        95 ~~~G~D~vid~~G~  108 (176)
T d2jhfa2          95 SNGGVDFSFEVIGR  108 (176)
T ss_dssp             TTSCBSEEEECSCC
T ss_pred             hcCCCCEEEecCCc
Confidence            22579999999886

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.84  E-value=0.0029  Score=46.06  Aligned_cols=44  Identities=14%  Similarity=0.255  Sum_probs=34.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKM   48 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~   48 (266)
                      ++|+|+|.|+ ||.+++++..|.+.|+ ++.++. +.++.+++++.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            5788999988 6699999999999998 788887 555555555443

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.84  E-value=0.018  Score=41.00  Aligned_cols=115  Identities=15%  Similarity=0.176  Sum_probs=63.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-------eEEEEe---cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC-------RLVLVG---NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEA   76 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~-------~v~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~   76 (266)
                      +|.|+||+|.+|..++..|+..+.       ...+.+   +.+..+.....+....  ......+...  +..    ...
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~----~~~   77 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA--FPLLAGLEAT--DDP----KVA   77 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT--CTTEEEEEEE--SCH----HHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccc--cccccccccC--Cch----hhh
Confidence            799999999999999999998753       122333   2233333333333221  1233333322  211    112


Q ss_pred             HHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhcc-CCCCeEEEEec
Q 024517           77 VDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES-KAGGSIVFLTS  147 (266)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~g~iv~iss  147 (266)
                             +...|++|..+|.. .   -...+..++   +.    ....+++.+.+.+.+. ++.+.++.+|.
T Consensus        78 -------~~~advViitaG~~-~---~pg~~r~dl---~~----~N~~i~~~~~~~i~k~a~~~~~vivvsN  131 (154)
T d1y7ta1          78 -------FKDADYALLVGAAP-R---KAGMERRDL---LQ----VNGKIFTEQGRALAEVAKKDVKVLVVGN  131 (154)
T ss_dssp             -------TTTCSEEEECCCCC-C---CTTCCHHHH---HH----HHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             -------cccccEEEeecCcC-C---CCCCcHHHH---HH----HHHHHHHHHHHHHHHhCCCCcEEEEecC
Confidence                   24689999999873 1   123444433   22    3455667777776663 22456666665

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.83  E-value=0.00062  Score=49.86  Aligned_cols=45  Identities=20%  Similarity=0.254  Sum_probs=34.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKM   48 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~   48 (266)
                      .+.+|||+||++|+|...++.....|++|+.+.+.++-.+.++++
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~l   67 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQL   67 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhh
Confidence            356899999999999999988888899999988443334444444

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.80  E-value=0.0025  Score=46.33  Aligned_cols=73  Identities=14%  Similarity=0.150  Sum_probs=49.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|.+|+|.|+ |++|...++.+...|+++++++ ++++ .+.++++      +... +  +|..+.+  ..       ..
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~-~~~a~~l------Gad~-~--i~~~~~~--~~-------~~   89 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAK-REAAKAL------GADE-V--VNSRNAD--EM-------AA   89 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHH------TCSE-E--EETTCHH--HH-------HT
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhH-HHHHhcc------CCcE-E--EECchhh--HH-------HH
Confidence            5789999986 8899999988888899999888 5554 4555555      2222 2  3544433  11       11


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                      ..+.+|+++.++|.
T Consensus        90 ~~~~~D~vid~~g~  103 (168)
T d1uufa2          90 HLKSFDFILNTVAA  103 (168)
T ss_dssp             TTTCEEEEEECCSS
T ss_pred             hcCCCceeeeeeec
Confidence            22579999999986

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.79  E-value=0.0035  Score=45.56  Aligned_cols=74  Identities=18%  Similarity=0.213  Sum_probs=49.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|.+++|.|+ |++|...++.+...|++|++++ ++++++ .++++      |... +  .|..+..  ...      ..
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~-~a~~l------Ga~~-~--i~~~~~~--~~~------~~   87 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRE-DAMKM------GADH-Y--IATLEEG--DWG------EK   87 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHH-HHHHH------TCSE-E--EEGGGTS--CHH------HH
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHH-Hhhcc------CCcE-E--eeccchH--HHH------Hh
Confidence            5889999987 7999998888778899999999 655554 44444      2232 2  2333332  111      12


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                      ..+.+|.++.+.+.
T Consensus        88 ~~~~~d~vi~~~~~  101 (168)
T d1piwa2          88 YFDTFDLIVVCASS  101 (168)
T ss_dssp             SCSCEEEEEECCSC
T ss_pred             hhcccceEEEEecC
Confidence            23578999999875

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.73  E-value=0.0043  Score=45.47  Aligned_cols=80  Identities=10%  Similarity=0.108  Sum_probs=51.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|.+|+|.|+ |+||...++.+...|+ +|++++..+...+.++++-      ... +  .|....++ .+....+..  
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~G------a~~-~--i~~~~~~~-~~~~~~~~~--   94 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALG------ATD-C--LNPRELDK-PVQDVITEL--   94 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTT------CSE-E--ECGGGCSS-CHHHHHHHH--
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhC------CCc-c--cCCccchh-hhhhhHhhh--
Confidence            5789999975 8999999999999999 5666774444456666652      222 2  23332220 233333332  


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                      ..+.+|++|.++|.
T Consensus        95 ~~~G~d~vie~~G~  108 (174)
T d1e3ia2          95 TAGGVDYSLDCAGT  108 (174)
T ss_dssp             HTSCBSEEEESSCC
T ss_pred             hcCCCcEEEEeccc
Confidence            23579999999986

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.71  E-value=0.00096  Score=48.10  Aligned_cols=123  Identities=14%  Similarity=0.102  Sum_probs=70.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccC-CCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLK-GGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      +.+++.|.|+ |.+|..+|..++.++. ++++.| +++.++.....+..... .........  -++.+     ..+   
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~--~~~~~-----~~~---   74 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA--EYSYE-----AAL---   74 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE--ECSHH-----HHH---
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEec--cCchh-----hhh---
Confidence            5667888897 8899999999998885 899999 77766666555542210 011111211  11111     122   


Q ss_pred             HHHhCCCCEEEEcCCCCCCCC-CCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           81 CQILGNLDAFVHCYTYEGKMQ-DPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                          ..-|++|.++|...... +-...+..+   .+.    ....+++.+.+.+.+...++.++.+|..
T Consensus        75 ----~~adiVvitag~~~~~g~~~~~~tR~~---l~~----~n~~iv~~i~~~i~~~~p~aiviivsNP  132 (154)
T d1pzga1          75 ----TGADCVIVTAGLTKVPGKPDSEWSRND---LLP----FNSKIIREIGQNIKKYCPKTFIIVVTNP  132 (154)
T ss_dssp             ----TTCSEEEECCSCSSCTTCCGGGCCGGG---GHH----HHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred             ----cCCCeEEEecccccCCCCCCcccchhh---hhh----hhHHHHHHHHHHHHhcCCCcEEEEeCCc
Confidence                35799999998732211 111123211   122    3344566677766665546777777764

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.70  E-value=0.0017  Score=46.56  Aligned_cols=76  Identities=14%  Similarity=0.233  Sum_probs=55.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      ..++|.|.+ .+|..+++.|.++|.+|++++ ++++..+..++...     ..+.++..|.++++  .    ++++.  .
T Consensus         4 nHiII~G~g-~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~-----~~~~vi~Gd~~d~~--~----L~~a~--i   69 (153)
T d1id1a_           4 DHFIVCGHS-ILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-----DNADVIPGDSNDSS--V----LKKAG--I   69 (153)
T ss_dssp             SCEEEECCS-HHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-----TTCEEEESCTTSHH--H----HHHHT--T
T ss_pred             CEEEEECCC-HHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc-----CCcEEEEccCcchH--H----HHHhc--c
Confidence            357888875 699999999999999999998 66665555555542     46888999999977  3    33321  2


Q ss_pred             CCCCEEEEcCC
Q 024517           85 GNLDAFVHCYT   95 (266)
Q Consensus        85 g~id~li~~ag   95 (266)
                      .+.+.+|...+
T Consensus        70 ~~a~~vi~~~~   80 (153)
T d1id1a_          70 DRCRAILALSD   80 (153)
T ss_dssp             TTCSEEEECSS
T ss_pred             ccCCEEEEccc
Confidence            36788887753

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.70  E-value=0.0012  Score=48.64  Aligned_cols=99  Identities=16%  Similarity=0.148  Sum_probs=62.7

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +.++||+||+||+|...++..-..|++|+.+. ++++ .+..+++-      .+ .+  .|-.+.+  ..+. +.     
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k-~~~~~~lG------ad-~v--i~~~~~~--~~~~-l~-----   93 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST-HEYLKSLG------AS-RV--LPRDEFA--ESRP-LE-----   93 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG-HHHHHHHT------EE-EE--EEGGGSS--SCCS-SC-----
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhH-HHHHHhhc------cc-cc--cccccHH--HHHH-HH-----
Confidence            45899999999999999999889999999888 4444 44444542      12 12  3444433  1111 11     


Q ss_pred             hCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEeccccc
Q 024517           84 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGA  151 (266)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~  151 (266)
                      ....|.++.++|..                           .+...++.+..   +|+++.++...+.
T Consensus        94 ~~~~~~vvD~Vgg~---------------------------~~~~~l~~l~~---~Griv~~G~~~~~  131 (177)
T d1o89a2          94 KQVWAGAIDTVGDK---------------------------VLAKVLAQMNY---GGCVAACGLAGGF  131 (177)
T ss_dssp             CCCEEEEEESSCHH---------------------------HHHHHHHTEEE---EEEEEECCCTTCS
T ss_pred             hhcCCeeEEEcchH---------------------------HHHHHHHHhcc---ccceEeecccCCc
Confidence            13468888887540                           13345555544   6899999887654

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.70  E-value=0.011  Score=42.06  Aligned_cols=120  Identities=14%  Similarity=0.153  Sum_probs=70.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccC-CCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLK-GGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .++.|.|+ |++|..++..+..++. ++++.| ++++.+.....+..... .+.+..+...+  +.+             
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~-------------   67 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYD-------------   67 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGG-------------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--ccc-------------
Confidence            46777785 8999999998888876 889999 77766666555543210 01333443332  111             


Q ss_pred             HhCCCCEEEEcCCCCCCCCCC-CCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDP-LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                      ....-|++|.++|........ ...+..   ..+..|    ..+.+.+.+.+.+...++.++++|.+
T Consensus        68 ~~~~advvvitag~~~~~g~~~~~~~R~---~l~~~N----~~iv~~i~~~i~~~~p~aivivvtNP  127 (150)
T d1t2da1          68 DLAGADVVIVTAGFTKAPGKSDKEWNRD---DLLPLN----NKIMIEIGGHIKKNCPNAFIIVVTNP  127 (150)
T ss_dssp             GGTTCSEEEECCSCSSCTTCCSTTCCGG---GGHHHH----HHHHHHHHHHHHHHCTTSEEEECSSS
T ss_pred             ccCCCcEEEEecccccCCCCCccccchh---HHHHHH----HHHHHHHHHHHHhcCCCeEEEEecCc
Confidence            113579999999873221111 112221   122233    45667777777666546777777764

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.69  E-value=0.034  Score=38.94  Aligned_cols=115  Identities=19%  Similarity=0.192  Sum_probs=66.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccC-CCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLK-GGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++.|+|+ |.+|..++..++.+|.  ++++.| ++++++.....+..... ......+...  .+.+  .          
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~--~----------   66 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYA--D----------   66 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGG--G----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHH--H----------
Confidence            3677786 8999999999999984  899999 77666555444432210 0123333322  2222  1          


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                       +..-|++|.++|....  +  ..+..   ..++.|    ..+.+...+.+.+..+.+.++++|.+
T Consensus        67 -~~dadvvvitag~~~~--~--g~~r~---~l~~~N----~~i~~~i~~~i~~~~p~aivivvtNP  120 (142)
T d1guza1          67 -TANSDIVIITAGLPRK--P--GMTRE---DLLMKN----AGIVKEVTDNIMKHSKNPIIIVVSNP  120 (142)
T ss_dssp             -GTTCSEEEECCSCCCC--T--TCCHH---HHHHHH----HHHHHHHHHHHHHHCSSCEEEECCSS
T ss_pred             -hcCCeEEEEEEecCCC--C--CCchH---HHHHHH----HHHHHHHHHHhhccCCCeEEEEecCC
Confidence             1367999999987221  1  12222   223333    33456666666555435777777664

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.69  E-value=0.0041  Score=45.51  Aligned_cols=80  Identities=15%  Similarity=0.167  Sum_probs=50.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|.+|+|.|+ +++|...++.+...|+ +|+++++.+...+.++++      |....   .|.++.+. .+.+.....  
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~l------Ga~~~---i~~~~~d~-~~~~~~~~~--   93 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL------GATEC---LNPKDYDK-PIYEVICEK--   93 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT------TCSEE---ECGGGCSS-CHHHHHHHH--
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHc------CCcEE---EcCCCchh-HHHHHHHHh--
Confidence            5789999986 8999999999999998 677777444444555554      22222   34444330 122222222  


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                      .-+.+|++|.++|.
T Consensus        94 ~~~G~d~vid~~g~  107 (174)
T d1p0fa2          94 TNGGVDYAVECAGR  107 (174)
T ss_dssp             TTSCBSEEEECSCC
T ss_pred             cCCCCcEEEEcCCC
Confidence            22469999999875

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.67  E-value=0.0021  Score=47.33  Aligned_cols=48  Identities=17%  Similarity=0.410  Sum_probs=38.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcc
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGS   51 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~   51 (266)
                      ++++|++||.|++ |.+++++..|.+.| +|.++. +.++.+++++.+...
T Consensus        15 ~~~~k~vlIlGaG-G~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~   63 (177)
T d1nvta1          15 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEK   63 (177)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCc-HHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHh
Confidence            4789999999875 58999999997766 888888 667788887777644

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.58  E-value=0.0049  Score=46.03  Aligned_cols=117  Identities=12%  Similarity=0.056  Sum_probs=64.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|.+|||.|+ +++|...+......|+ +|+++++.+...+.++++      +  ... ..|-.+.+  -.++.. ++. 
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~------G--a~~-~~~~~~~~--~~~~i~-~~t-   90 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ------G--FEI-ADLSLDTP--LHEQIA-ALL-   90 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT------T--CEE-EETTSSSC--HHHHHH-HHH-
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhc------c--ccE-EEeCCCcC--HHHHHH-HHh-
Confidence            5889999986 7899888888878888 677777433333444443      1  222 23434443  222222 221 


Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                      .-..+|++|.+.|......+...           .+..+.-..++.++..++.   +|+|+.++-.
T Consensus        91 ~g~g~D~vid~vG~~~~~~~~~~-----------~~~~~~~~~l~~~~~~~r~---gG~v~~~G~~  142 (195)
T d1kola2          91 GEPEVDCAVDAVGFEARGHGHEG-----------AKHEAPATVLNSLMQVTRV---AGKIGIPGLY  142 (195)
T ss_dssp             SSSCEEEEEECCCTTCBCSSTTG-----------GGSBCTTHHHHHHHHHEEE---EEEEEECSCC
T ss_pred             CCCCcEEEEECccccccCCcccc-----------eeecCcHHHHHHHHHHHhc---CCEEEEeeec
Confidence            12359999999986322111110           0112222344555555554   6899888753

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.47  E-value=0.065  Score=37.42  Aligned_cols=114  Identities=13%  Similarity=0.119  Sum_probs=68.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcccC-CCCCeEEEEE-ecCCCchHHHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGSLK-GGQPVEVVGL-DMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~-D~~~~~~~~v~~~~~~~~   81 (266)
                      ++.|.|+ |.+|.++|..++.+|.  ++++.| ++++.+..+..++.... -.....+... |..+         +    
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~---------~----   67 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSL---------L----   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGG---------G----
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHH---------h----
Confidence            4667786 8899999999998885  699999 77666555554542211 0122233222 2221         1    


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecc
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI  148 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~  148 (266)
                         ..-|++|..+|.. . .+  ..+..   ..+.    ....+.+.+.+.+.+....+.++.+|.+
T Consensus        68 ---~~adiVvitag~~-~-~~--g~~r~---~l~~----~n~~i~~~i~~~i~~~~p~aivivvtNP  120 (142)
T d1ojua1          68 ---KGSEIIVVTAGLA-R-KP--GMTRL---DLAH----KNAGIIKDIAKKIVENAPESKILVVTNP  120 (142)
T ss_dssp             ---TTCSEEEECCCCC-C-CS--SCCHH---HHHH----HHHHHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred             ---ccccEEEEecccc-C-CC--CCchH---HHHH----HhhHHHHHHHHHHHhhCCCcEEEEecCC
Confidence               3579999999862 2 11  22322   2222    3455667777777776546777777764

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.45  E-value=0.01  Score=43.42  Aligned_cols=116  Identities=19%  Similarity=0.227  Sum_probs=64.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcC---C----eEEEEecc---cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRG---C----RLVLVGNE---RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDE   75 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g---~----~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~   75 (266)
                      .+|.|+||+|+||.+++..|++..   .    .+.+.+..   +.++...-+++....  .....+.  .++..    .+
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~--~~~~~~~--~~~~~----~~   96 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLY--PLLREVS--IGIDP----YE   96 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC--TTEEEEE--EESCH----HH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhccccc--ccccCcc--ccccc----hh
Confidence            369999999999999999999743   2    34455522   223344444433211  1222222  22221    11


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhcc-CCCCeEEEEec
Q 024517           76 AVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES-KAGGSIVFLTS  147 (266)
Q Consensus        76 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~g~iv~iss  147 (266)
                      .       +...|++|..+|...    -..++.+|   .+..|    ..+++...+.+.+. ++...|+.++.
T Consensus        97 ~-------~~~aDvVvi~ag~~r----kpg~tR~D---ll~~N----~~I~k~~~~~i~~~a~~~~~vlvv~N  151 (175)
T d7mdha1          97 V-------FEDVDWALLIGAKPR----GPGMERAA---LLDIN----GQIFADQGKALNAVASKNVKVLVVGN  151 (175)
T ss_dssp             H-------TTTCSEEEECCCCCC----CTTCCHHH---HHHHH----HHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             h-------ccCCceEEEeeccCC----CCCCcHHH---HHHHH----HHHHHHHHHHHHhhCCCCcEEEEecC
Confidence            2       347899999998731    12344444   33334    55667777777664 32455666654

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.42  E-value=0.013  Score=42.21  Aligned_cols=76  Identities=14%  Similarity=0.153  Sum_probs=47.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|.++||.|+ |++|...++.+...|++|++++ ++++.+ .++++      |..   ...|-++.+  .    .+.+..
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~-~~k~~------Ga~---~~~~~~~~~--~----~~~~~~   89 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLE-LAKEL------GAD---LVVNPLKED--A----AKFMKE   89 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHH-HHHHT------TCS---EEECTTTSC--H----HHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhh-hhhhc------Ccc---eecccccch--h----hhhccc
Confidence            5788999875 8899999888888899999988 554443 33333      222   223555544  2    222333


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                      .....+.+|.+++.
T Consensus        90 ~~~~~~~~v~~~~~  103 (168)
T d1rjwa2          90 KVGGVHAAVVTAVS  103 (168)
T ss_dssp             HHSSEEEEEESSCC
T ss_pred             ccCCCceEEeecCC
Confidence            33456666667654

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.39  E-value=0.0047  Score=43.98  Aligned_cols=34  Identities=32%  Similarity=0.659  Sum_probs=31.5

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      +++||++||+||+. +|..-++.|++.|++|.+++
T Consensus        10 ~l~gkrvLViGgG~-va~~ka~~Ll~~GA~VtVva   43 (150)
T d1kyqa1          10 QLKDKRILLIGGGE-VGLTRLYKLMPTGCKLTLVS   43 (150)
T ss_dssp             CCTTCEEEEEEESH-HHHHHHHHHGGGTCEEEEEE
T ss_pred             eeCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEe
Confidence            57999999999966 99999999999999999886

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.27  E-value=0.0026  Score=47.46  Aligned_cols=43  Identities=28%  Similarity=0.314  Sum_probs=36.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMM   49 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~   49 (266)
                      |++.|.|++ -+|..+|..|+.+|++|++.+ +++.++...+.+.
T Consensus         5 kkvaViGaG-~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2           5 KHVTVIGGG-LMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             CEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEEEECcC-HHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence            688999994 599999999999999999999 7776666665554

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.18  E-value=0.051  Score=38.52  Aligned_cols=116  Identities=16%  Similarity=0.221  Sum_probs=61.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC-------eEEEEe-cc--cccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGC-------RLVLVG-NE--RRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDE   75 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~-------~v~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~   75 (266)
                      -+|.|+||+|.+|.+++..|+..+.       .+++.+ +.  +..+....++....  ......  ...++..    ..
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~--~~~~~~--~~~~~~~----~~   75 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCA--LPLLKD--VIATDKE----EI   75 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTC--CTTEEE--EEEESCH----HH
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccc--cccccc--cccCccc----cc
Confidence            3789999999999999999986542       355555 22  12222222222221  122222  2223222    11


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhcc-CCCCeEEEEec
Q 024517           76 AVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES-KAGGSIVFLTS  147 (266)
Q Consensus        76 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~g~iv~iss  147 (266)
                      .+       ...|++|..+|.... .   ..+..+   .+    .....+++...+.+.+. +..+.++.+|.
T Consensus        76 ~~-------~~~dvVVitag~~~~-~---g~sr~d---ll----~~N~~i~k~~~~~i~k~a~~~~~iivvsN  130 (154)
T d5mdha1          76 AF-------KDLDVAILVGSMPRR-D---GMERKD---LL----KANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (154)
T ss_dssp             HT-------TTCSEEEECCSCCCC-T---TCCTTT---TH----HHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             cc-------CCceEEEEecccCCC-C---CCchhH---HH----HHhHHHHHHHHHHHHhhCCCceEEEEecC
Confidence            22       468999999987321 1   122221   12    23446677777776553 32344555554

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.06  E-value=0.011  Score=42.97  Aligned_cols=78  Identities=9%  Similarity=0.084  Sum_probs=47.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|.+++|.|+ +++|...++.+...|+ +|+++++.+...+.++++      +.. .+  .|.++ +  .+++..+... 
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~------ga~-~~--i~~~~-~--~~~~~~~~~~-   97 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERL------GAD-HV--VDARR-D--PVKQVMELTR-   97 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHT------TCS-EE--EETTS-C--HHHHHHHHTT-
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhc------ccc-ee--ecCcc-c--HHHHHHHhhC-
Confidence            4788999886 8899999998888897 555666433333333333      122 22  34433 3  3444333211 


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                       ...+|++|.++|.
T Consensus        98 -~~g~d~vid~~g~  110 (172)
T d1h2ba2          98 -GRGVNVAMDFVGS  110 (172)
T ss_dssp             -TCCEEEEEESSCC
T ss_pred             -CCCceEEEEecCc
Confidence             1359999999986

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.05  E-value=0.0043  Score=46.58  Aligned_cols=40  Identities=18%  Similarity=0.282  Sum_probs=34.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLS   42 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~   42 (266)
                      +|+||+++|-| .|.+|..+|+.|.+.|++|++++ +.+...
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~   64 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVA   64 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHH
Confidence            58999999987 66799999999999999999998 554443

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.03  E-value=0.013  Score=43.48  Aligned_cols=86  Identities=7%  Similarity=0.045  Sum_probs=53.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHH---------HHHHhcccCCCCCeEEEEEecCCCchH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSV---------AEKMMGSLKGGQPVEVVGLDMEEDREG   71 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~---------~~~~~~~~~~~~~~~~~~~D~~~~~~~   71 (266)
                      ++.||++.|.|-+. ||+.+|+.+...|++|+..+ ........         .+++-+    ..++..+.+.+++..  
T Consensus        46 eL~gktvgIiG~G~-IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~l~~ll~----~sD~i~~~~plt~~T--  118 (193)
T d1mx3a1          46 RIRGETLGIIGLGR-VGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLF----HSDCVTLHCGLNEHN--  118 (193)
T ss_dssp             CCTTCEEEEECCSH-HHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHH----HCSEEEECCCCCTTC--
T ss_pred             eeeCceEEEecccc-ccccceeeeeccccceeeccCcccccchhhhccccccchhhccc----cCCEEEEeecccccc--
Confidence            47899999997655 99999999999999999988 32221110         111111    157788888887655  


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEcCCC
Q 024517           72 AFDEAVDKACQILGNLDAFVHCYTY   96 (266)
Q Consensus        72 ~v~~~~~~~~~~~g~id~li~~ag~   96 (266)
                        ..+++.-.=..-+.+.++-|.+.
T Consensus       119 --~~li~~~~l~~mk~~a~lIN~sR  141 (193)
T d1mx3a1         119 --HHLINDFTVKQMRQGAFLVNTAR  141 (193)
T ss_dssp             --TTSBSHHHHTTSCTTEEEEECSC
T ss_pred             --hhhhhHHHHhccCCCCeEEecCC
Confidence              22333211111245666666655

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.02  E-value=0.021  Score=41.34  Aligned_cols=80  Identities=13%  Similarity=0.180  Sum_probs=49.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|.+|+|.|+ +++|...+..+...|+ +|+.+++.+...+.+.++      |..- +  .|.++.+. .+++...... 
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~------GAd~-~--in~~~~~~-~~~~~~~~~~-   95 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF------GATD-F--VNPNDHSE-PISQVLSKMT-   95 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT------TCCE-E--ECGGGCSS-CHHHHHHHHH-
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHc------CCcE-E--EcCCCcch-hHHHHHHhhc-
Confidence            5788999986 6688888888888888 566777544444555554      2222 2  34444330 1222332221 


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                       -+.+|+++.++|.
T Consensus        96 -~~G~d~vid~~G~  108 (175)
T d1cdoa2          96 -NGGVDFSLECVGN  108 (175)
T ss_dssp             -TSCBSEEEECSCC
T ss_pred             -cCCcceeeeecCC
Confidence             2469999999986

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.01  E-value=0.0025  Score=46.48  Aligned_cols=35  Identities=17%  Similarity=0.281  Sum_probs=33.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      +++||+++|.|-|.=+|+-++..|+++|+.|..++
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~   60 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVD   60 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEEC
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEec
Confidence            57899999999999999999999999999999887

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.94  E-value=0.013  Score=43.23  Aligned_cols=89  Identities=15%  Similarity=0.107  Sum_probs=54.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHH--------hcccCCCCCeEEEEEecCCCchHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKM--------MGSLKGGQPVEVVGLDMEEDREGAF   73 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~D~~~~~~~~v   73 (266)
                      +++++++.|.|.+. ||+++++.+...|.+|+..++...........        .+... ..++..+.+.+++..    
T Consensus        41 ~l~~~~vgiiG~G~-IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l~-~sD~v~~~~plt~~T----  114 (188)
T d2naca1          41 DLEAMHVGTVAAGR-IGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYP-VCDVVTLNCPLHPET----  114 (188)
T ss_dssp             CCTTCEEEEECCSH-HHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGG-GCSEEEECSCCCTTT----
T ss_pred             eccccceeeccccc-cchhhhhhhhccCceEEEEeeccccccccccccccccCCHHHHHH-hccchhhcccccccc----
Confidence            46789999998655 99999999999999999988443333332221        11111 257777777777644    


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCC
Q 024517           74 DEAVDKACQILGNLDAFVHCYTY   96 (266)
Q Consensus        74 ~~~~~~~~~~~g~id~li~~ag~   96 (266)
                      +.++++-.=..-+-+.++-|++.
T Consensus       115 ~~li~~~~l~~mk~ga~lIN~aR  137 (188)
T d2naca1         115 EHMINDETLKLFKRGAYIVNTAR  137 (188)
T ss_dssp             TTCBSHHHHTTSCTTEEEEECSC
T ss_pred             hhhhHHHHHHhCCCCCEEEecCc
Confidence            23433321111245666555554

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.93  E-value=0.018  Score=38.58  Aligned_cols=72  Identities=18%  Similarity=0.250  Sum_probs=52.0

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ....++.|.||++ +|+-++....+.|+++++.+ +.+....   .        .--.++..|..|.+  .+.++.... 
T Consensus         9 ~~~~kigIlGgGQ-L~rMla~aA~~lG~~v~v~d~~~~~PA~---~--------va~~~i~~~~~d~~--~l~~~~~~~-   73 (111)
T d1kjqa2           9 PAATRVMLLGSGE-LGKEVAIECQRLGVEVIAVDRYADAPAM---H--------VAHRSHVINMLDGD--ALRRVVELE-   73 (111)
T ss_dssp             TTCCEEEEESCSH-HHHHHHHHHHTTTCEEEEEESSTTCGGG---G--------GSSEEEECCTTCHH--HHHHHHHHH-
T ss_pred             CCCCEEEEEeCCH-HHHHHHHHHHHCCCEEEEEcCCCCCchh---h--------cCCeEEECCCCCHH--HHHHHHHhh-
Confidence            3567899999665 99999999999999999998 5443321   1        12256778999988  776666542 


Q ss_pred             HHhCCCCEEEEc
Q 024517           82 QILGNLDAFVHC   93 (266)
Q Consensus        82 ~~~g~id~li~~   93 (266)
                          .+|++-.-
T Consensus        74 ----~~DviT~E   81 (111)
T d1kjqa2          74 ----KPHYIVPE   81 (111)
T ss_dssp             ----CCSEEEEC
T ss_pred             ----CCceEEEE
Confidence                67888543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.93  E-value=0.03  Score=40.64  Aligned_cols=88  Identities=10%  Similarity=0.123  Sum_probs=59.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcc------------cCCCCCeEEEEEecCCCchHH
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGS------------LKGGQPVEVVGLDMEEDREGA   72 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~------------~~~~~~~~~~~~D~~~~~~~~   72 (266)
                      +++-|.|- |.+|..+|+.|+++|++|++.+ ++++.+++.+.-...            .........+...+.+.+  .
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~--~   79 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQ--A   79 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTH--H
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchH--H
Confidence            45667776 5699999999999999999999 666666654331100            000123344555567767  8


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCC
Q 024517           73 FDEAVDKACQILGNLDAFVHCYTY   96 (266)
Q Consensus        73 v~~~~~~~~~~~g~id~li~~ag~   96 (266)
                      +....+.+.....+=+++|.+...
T Consensus        80 v~~v~~~l~~~~~~g~iiid~sT~  103 (176)
T d2pgda2          80 VDNFIEKLVPLLDIGDIIIDGGNS  103 (176)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECSCC
T ss_pred             HHHHHHHHHhccccCcEEEecCcc
Confidence            888888877766555778877644

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.89  E-value=0.015  Score=43.38  Aligned_cols=62  Identities=13%  Similarity=0.062  Sum_probs=43.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-ccccc-------HHHHHHHhcccCCCCCeEEEEEecCCCc
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRL-------SSVAEKMMGSLKGGQPVEVVGLDMEEDR   69 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~   69 (266)
                      ++.+|++.|.|.+. ||+.+++.+...|++|+..+ .....       .++.+.+. .    .++..+.+.+++..
T Consensus        42 ~l~~ktvgIiG~G~-IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~~l~~-~----~D~v~~~~plt~~T  111 (199)
T d1dxya1          42 ELGQQTVGVMGTGH-IGQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFK-Q----SDVIDLHVPGIEQN  111 (199)
T ss_dssp             CGGGSEEEEECCSH-HHHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHH-H----CSEEEECCCCCGGG
T ss_pred             cccceeeeeeeccc-ccccccccccccceeeeccCCccchhhhcchhHHHHHHHHH-h----cccceeeecccccc
Confidence            46789999998766 99999999999999999988 33211       11222222 1    57777777777643

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.86  E-value=0.0093  Score=43.01  Aligned_cols=42  Identities=10%  Similarity=0.270  Sum_probs=36.3

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSS   43 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~   43 (266)
                      +++||+++|.|-+.=+|+-++..|.++|++|.++. +...+.+
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~   76 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRH   76 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHH
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHH
Confidence            47899999999999999999999999999999988 4444443

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.85  E-value=0.011  Score=44.07  Aligned_cols=34  Identities=15%  Similarity=0.202  Sum_probs=30.8

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      +++||++.|.|-+. ||+.+|+.+...|++|+..+
T Consensus        40 el~gk~vgIiG~G~-IG~~va~~l~~fg~~V~~~d   73 (197)
T d1j4aa1          40 EVRDQVVGVVGTGH-IGQVFMQIMEGFGAKVITYD   73 (197)
T ss_dssp             CGGGSEEEEECCSH-HHHHHHHHHHHTTCEEEEEC
T ss_pred             cccCCeEEEecccc-cchhHHHhHhhhcccccccC
Confidence            46899999998765 99999999999999999888

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.82  E-value=0.017  Score=42.57  Aligned_cols=89  Identities=16%  Similarity=0.045  Sum_probs=53.0

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHH------HhcccCCCCCeEEEEEecCCCchHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEK------MMGSLKGGQPVEVVGLDMEEDREGAFDE   75 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~D~~~~~~~~v~~   75 (266)
                      ++.+|++.|.|. |.||+.+++.+...|++|+..++....+.....      +.+..+ ..++..+.|.++...    +.
T Consensus        41 ~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~~l~ell~-~sDiv~~~~Plt~~T----~~  114 (184)
T d1ygya1          41 EIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLA-RADFISVHLPKTPET----AG  114 (184)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHH-HCSEEEECCCCSTTT----TT
T ss_pred             cccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHhhcCceeccHHHHHh-hCCEEEEcCCCCchh----hh
Confidence            467899999885 569999999999999999998832222211111      000111 157777788777644    23


Q ss_pred             HHHHHHHHhCCCCEEEEcCCC
Q 024517           76 AVDKACQILGNLDAFVHCYTY   96 (266)
Q Consensus        76 ~~~~~~~~~g~id~li~~ag~   96 (266)
                      ++++-.=..-+.+.++-|++.
T Consensus       115 lin~~~l~~mk~~a~lIN~sR  135 (184)
T d1ygya1         115 LIDKEALAKTKPGVIIVNAAR  135 (184)
T ss_dssp             CBCHHHHTTSCTTEEEEECSC
T ss_pred             hhhHHHHhhhCCCceEEEecc
Confidence            443211111245666666655

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.79  E-value=0.0022  Score=47.37  Aligned_cols=33  Identities=21%  Similarity=0.243  Sum_probs=31.2

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      ++||++.|.|.+. ||+.+++.+...|++|+..+
T Consensus        40 l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d   72 (181)
T d1qp8a1          40 IQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFS   72 (181)
T ss_dssp             CTTCEEEEESCST-HHHHHHHHHHHTTCEEEEEC
T ss_pred             ccCceEEEecccc-ccccceeeeecccccccccc
Confidence            6899999999887 99999999999999999988

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.69  E-value=0.0085  Score=43.48  Aligned_cols=41  Identities=5%  Similarity=0.038  Sum_probs=36.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLS   42 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~   42 (266)
                      +++||+++|.|-+.=+|+-++..|.++|++|.+++ +...+.
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            57899999999999999999999999999999998 444443

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.68  E-value=0.018  Score=41.32  Aligned_cols=81  Identities=14%  Similarity=0.091  Sum_probs=48.7

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHH--h------cccCCCCCeEEEEEecCCCchHHHHHHHH
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKM--M------GSLKGGQPVEVVGLDMEEDREGAFDEAVD   78 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~--~------~~~~~~~~~~~~~~D~~~~~~~~v~~~~~   78 (266)
                      +.|.|. |.+|.++|+.|.++|++|++.+ +++..++..+.-  .      +... ..++.++.+   ..+  +++++++
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~-~~DiIilav---p~~--~~~~vl~   75 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQ-TAKIIFLCT---PIQ--LILPTLE   75 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGT-TCSEEEECS---CHH--HHHHHHH
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeeccccc-ccccccccC---cHh--hhhhhhh
Confidence            666755 7799999999999999999998 444444333211  0      0111 234333322   233  6778888


Q ss_pred             HHHHHhCCCCEEEEcCC
Q 024517           79 KACQILGNLDAFVHCYT   95 (266)
Q Consensus        79 ~~~~~~g~id~li~~ag   95 (266)
                      ++.....+=.++++.++
T Consensus        76 ~l~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          76 KLIPHLSPTAIVTDVAS   92 (165)
T ss_dssp             HHGGGSCTTCEEEECCS
T ss_pred             hhhhhcccccceeeccc
Confidence            87665544445555543

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.66  E-value=0.0042  Score=46.05  Aligned_cols=43  Identities=16%  Similarity=0.282  Sum_probs=35.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMM   49 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~   49 (266)
                      |++.|.|+ |-+|..+|..|+.+|++|++.+ +++.+++..+.+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   48 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA   48 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence            46889998 5599999999999999999999 7776666555554

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.49  E-value=0.02  Score=42.41  Aligned_cols=34  Identities=12%  Similarity=0.046  Sum_probs=30.6

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      +++||++.|.|.+. ||+.+++.+...|++|+..+
T Consensus        44 ~l~g~tvgIiG~G~-IG~~va~~l~~fg~~v~~~d   77 (191)
T d1gdha1          44 KLDNKTLGIYGFGS-IGQALAKRAQGFDMDIDYFD   77 (191)
T ss_dssp             CCTTCEEEEECCSH-HHHHHHHHHHTTTCEEEEEC
T ss_pred             eecccceEEeeccc-chHHHHHHHHhhcccccccc
Confidence            46799999998766 99999999999999999887

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.47  E-value=0.0091  Score=43.57  Aligned_cols=39  Identities=15%  Similarity=0.176  Sum_probs=32.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSV   44 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~   44 (266)
                      +|++.|.|+ |.+|.++|..|+++|++|.+.+ ++++.+..
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~   40 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEI   40 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            478999998 5699999999999999999999 44444443

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.46  E-value=0.023  Score=39.08  Aligned_cols=74  Identities=15%  Similarity=0.197  Sum_probs=52.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      ++.|.|++|.+|+.+++.+.++|+.++..-+....+        ... ..+   +..|+|.++  .+.+.++.+.+.  +
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~--------~~~-~~D---VvIDFS~p~--~~~~~l~~~~~~--~   65 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE--------ELD-SPD---VVIDFSSPE--ALPKTVDLCKKY--R   65 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE--------ECS-CCS---EEEECSCGG--GHHHHHHHHHHH--T
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH--------Hhc-cCC---EEEEecCHH--HHHHHHHHHHhc--C
Confidence            489999999999999999999999877543111111        111 123   356999999  999999888766  4


Q ss_pred             CCEEEEcCCC
Q 024517           87 LDAFVHCYTY   96 (266)
Q Consensus        87 id~li~~ag~   96 (266)
                      +-+++-..|+
T Consensus        66 ~p~ViGTTG~   75 (128)
T d1vm6a3          66 AGLVLGTTAL   75 (128)
T ss_dssp             CEEEECCCSC
T ss_pred             CCEEEEcCCC
Confidence            5566666664

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.33  E-value=0.0034  Score=48.10  Aligned_cols=45  Identities=20%  Similarity=0.335  Sum_probs=36.7

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEK   47 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~   47 (266)
                      +|+||+++|-|-+ .+|..+|+.|.+.|++|++++ +....+.....
T Consensus        36 ~l~g~~v~IqG~G-nVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~   81 (230)
T d1leha1          36 SLEGLAVSVQGLG-NVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE   81 (230)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence            4789999998765 599999999999999999998 76665555444

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.30  E-value=0.059  Score=39.57  Aligned_cols=62  Identities=8%  Similarity=0.119  Sum_probs=42.7

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-ccccc-------HHHHHHHhcccCCCCCeEEEEEecCCCc
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRL-------SSVAEKMMGSLKGGQPVEVVGLDMEEDR   69 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~   69 (266)
                      ++.++++.|.|- |.||+.+++.+...|++|+..+ .....       +.+.+-+. .    .++..+.+.++...
T Consensus        41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~ell~-~----sDii~i~~plt~~T  110 (188)
T d1sc6a1          41 EARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLN-M----SDVVSLHVPENPST  110 (188)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHH-H----CSEEEECCCSSTTT
T ss_pred             cccceEEEEeec-ccchhhhhhhcccccceEeeccccccchhhhhhhhhhHHHHHh-h----ccceeecccCCcch
Confidence            468999999965 5599999999999999999988 32211       11222222 1    57777777777644

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.02  E-value=0.075  Score=36.75  Aligned_cols=76  Identities=13%  Similarity=0.089  Sum_probs=51.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHc-CCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            7 RVLLTSDGDEISKNIAFHLAKR-GCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~-g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      ++.|.|++|.+|+.+++...+. ++.++..- +.+.+....    ..   ..+   +..|+|.++  .+...++.+.+. 
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~----~~---~~D---vvIDFS~p~--~~~~~~~~~~~~-   67 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLT----DG---NTE---VVIDFTHPD--VVMGNLEFLIDN-   67 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHH----TT---TCS---EEEECCCTT--THHHHHHHHHHT-
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhc----cc---cCC---EEEEcccHH--HHHHHHHHHHhc-
Confidence            5789999999999999988775 55666443 444433321    11   123   456999999  888888877764 


Q ss_pred             CCCCEEEEcCCC
Q 024517           85 GNLDAFVHCYTY   96 (266)
Q Consensus        85 g~id~li~~ag~   96 (266)
                       ++-+++-..|+
T Consensus        68 -~~~~ViGTTG~   78 (135)
T d1yl7a1          68 -GIHAVVGTTGF   78 (135)
T ss_dssp             -TCEEEECCCCC
T ss_pred             -CCCEEEecccc
Confidence             46667756555

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.99  E-value=0.016  Score=41.67  Aligned_cols=36  Identities=19%  Similarity=0.302  Sum_probs=32.1

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cc
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE   38 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~   38 (266)
                      .+.||+++|.|=+ .||+.+|+.+...|++|++++ ++
T Consensus        21 ~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~V~v~e~dp   57 (163)
T d1li4a1          21 MIAGKVAVVAGYG-DVGKGCAQALRGFGARVIITEIDP   57 (163)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             eecCCEEEEeccc-cccHHHHHHHHhCCCeeEeeeccc
Confidence            4689999999876 599999999999999999998 54

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.86  E-value=0.042  Score=40.76  Aligned_cols=70  Identities=14%  Similarity=0.216  Sum_probs=49.7

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      +++||+||=.|+++|+   ++..++..|+ +|+.++ +++..+...+.       ..++.++.+|+.+.+          
T Consensus        46 dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N-------~~~~~~~~~D~~~l~----------  105 (197)
T d1ne2a_          46 NIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRN-------CGGVNFMVADVSEIS----------  105 (197)
T ss_dssp             SSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHH-------CTTSEEEECCGGGCC----------
T ss_pred             CCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHc-------cccccEEEEehhhcC----------
Confidence            4689999999999883   3455777786 699998 55444332222       246788888987654          


Q ss_pred             HHHHhCCCCEEEEcCCC
Q 024517           80 ACQILGNLDAFVHCYTY   96 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~   96 (266)
                           +++|++|.|..+
T Consensus       106 -----~~fD~Vi~NPPf  117 (197)
T d1ne2a_         106 -----GKYDTWIMNPPF  117 (197)
T ss_dssp             -----CCEEEEEECCCC
T ss_pred             -----CcceEEEeCccc
Confidence                 579999999654

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=94.79  E-value=0.064  Score=38.47  Aligned_cols=76  Identities=18%  Similarity=0.249  Sum_probs=52.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +.-+++|.|++- .|..-++.....|+.|.+.| |.++++++.....      .++..   -.++.+  .+.+.+.    
T Consensus        31 ~pa~V~ViGaGv-aG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~------~~~~~---~~~~~~--~l~~~~~----   94 (168)
T d1pjca1          31 KPGKVVILGGGV-VGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG------SRVEL---LYSNSA--EIETAVA----   94 (168)
T ss_dssp             CCCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG------GGSEE---EECCHH--HHHHHHH----
T ss_pred             CCcEEEEECCCh-HHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhc------cccee---ehhhhh--hHHHhhc----
Confidence            456789999876 79999999999999999999 8777776655543      22332   233333  4443333    


Q ss_pred             HhCCCCEEEEcCCCCC
Q 024517           83 ILGNLDAFVHCYTYEG   98 (266)
Q Consensus        83 ~~g~id~li~~ag~~~   98 (266)
                         .-|++|.++-+.+
T Consensus        95 ---~aDivI~aalipG  107 (168)
T d1pjca1          95 ---EADLLIGAVLVPG  107 (168)
T ss_dssp             ---TCSEEEECCCCTT
T ss_pred             ---cCcEEEEeeecCC
Confidence               5799999986633

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.58  E-value=0.11  Score=38.46  Aligned_cols=74  Identities=14%  Similarity=0.168  Sum_probs=52.5

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      +++|++||=.|++.|.   ++..++.+|+ +|+.++ +++..+...+.+...   +.+..++..|+.+..          
T Consensus        44 dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~---~~~~~~~~~d~~~~~----------  107 (201)
T d1wy7a1          44 DIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEF---KGKFKVFIGDVSEFN----------  107 (201)
T ss_dssp             SSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGG---TTSEEEEESCGGGCC----------
T ss_pred             CCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHc---CCCceEEECchhhhC----------
Confidence            4689999999988772   3344567786 899999 766666555555432   457788877776544          


Q ss_pred             HHHHhCCCCEEEEcCCC
Q 024517           80 ACQILGNLDAFVHCYTY   96 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~   96 (266)
                           +++|++|.|..+
T Consensus       108 -----~~fD~Vi~nPP~  119 (201)
T d1wy7a1         108 -----SRVDIVIMNPPF  119 (201)
T ss_dssp             -----CCCSEEEECCCC
T ss_pred             -----CcCcEEEEcCcc
Confidence                 579999999765

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.21  E-value=0.058  Score=36.13  Aligned_cols=34  Identities=15%  Similarity=0.293  Sum_probs=29.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEeccc
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNER   39 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~   39 (266)
                      .|.++|.||+- +|..+|..|.+.|.+|.++.+.+
T Consensus        22 p~~v~IiGgG~-ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          22 PKSLVVIGGGY-IGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             CSEEEEECCSH-HHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECCCc-cceeeeeeecccccEEEEEEecc
Confidence            47888888865 99999999999999999997433

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.07  E-value=0.072  Score=40.53  Aligned_cols=74  Identities=15%  Similarity=0.114  Sum_probs=54.5

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .++++||=.|.+.|.   ++..|+++|.+|+.+| +++.++...+.....   +.++.++..|+.+.+       .    
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~---~~~v~~~~~d~~~~~-------~----   98 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ---GLKPRLACQDISNLN-------I----   98 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHT---TCCCEEECCCGGGCC-------C----
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhcccccccc---Cccceeeccchhhhc-------c----
Confidence            457889999999874   7888999999999999 766666555554432   357889888888765       1    


Q ss_pred             HHhCCCCEEEEcCC
Q 024517           82 QILGNLDAFVHCYT   95 (266)
Q Consensus        82 ~~~g~id~li~~ag   95 (266)
                        .+++|+++...+
T Consensus        99 --~~~fD~i~~~~~  110 (246)
T d1y8ca_          99 --NRKFDLITCCLD  110 (246)
T ss_dssp             --SCCEEEEEECTT
T ss_pred             --cccccccceeee
Confidence              146899887543

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.03  E-value=0.049  Score=45.46  Aligned_cols=33  Identities=18%  Similarity=0.323  Sum_probs=28.4

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG   36 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~   36 (266)
                      |++.+|||.|+++ +|..+++.|+..|. ++.++|
T Consensus        35 l~~~kVlvvG~Gg-lG~ei~k~L~~~Gvg~i~lvD   68 (426)
T d1yovb1          35 LDTCKVLVIGAGG-LGCELLKNLALSGFRQIHVID   68 (426)
T ss_dssp             HHHCCEEEECSST-THHHHHHHHHTTTCCCEEEEC
T ss_pred             HhcCeEEEECCCH-HHHHHHHHHHHcCCCeEEEEE
Confidence            3466899999955 99999999999999 788887

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.02  E-value=0.02  Score=44.58  Aligned_cols=31  Identities=26%  Similarity=0.339  Sum_probs=28.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      +|+|+|.||+- -|..+|.+|+++|++|.++.
T Consensus         1 ~KkV~IIGaG~-aGL~aA~~La~~G~~V~vlE   31 (373)
T d1seza1           1 AKRVAVIGAGV-SGLAAAYKLKIHGLNVTVFE   31 (373)
T ss_dssp             CCEEEEECCSH-HHHHHHHHHHTTSCEEEEEC
T ss_pred             CCEEEEECcCH-HHHHHHHHHHhCCCCEEEEe
Confidence            68899999887 49999999999999999997

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=93.98  E-value=0.014  Score=40.09  Aligned_cols=69  Identities=16%  Similarity=0.160  Sum_probs=45.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      |.++|.|. +.+|..+++.|.  |.+|++++ +++..+..    ..     ..+.++..|.++++  .    ++++  ..
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~----~~-----~~~~~i~Gd~~~~~--~----L~~a--~i   60 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKV----LR-----SGANFVHGDPTRVS--D----LEKA--NV   60 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHH----HH-----TTCEEEESCTTSHH--H----HHHT--TC
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHH----Hh-----cCccccccccCCHH--H----HHHh--hh
Confidence            46778876 559999999994  55677777 55544332    21     35678889999876  3    3332  22


Q ss_pred             CCCCEEEEcC
Q 024517           85 GNLDAFVHCY   94 (266)
Q Consensus        85 g~id~li~~a   94 (266)
                      .+-+.+|...
T Consensus        61 ~~A~~vi~~~   70 (129)
T d2fy8a1          61 RGARAVIVNL   70 (129)
T ss_dssp             TTCSEEEECC
T ss_pred             hcCcEEEEec
Confidence            4677887654

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=93.96  E-value=0.16  Score=36.90  Aligned_cols=42  Identities=14%  Similarity=0.101  Sum_probs=34.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEK   47 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~   47 (266)
                      .-+|+|.||+- .|..-++.....|+.|.+.| |.++++++.+.
T Consensus        29 pa~VvViGaGv-aG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l   71 (183)
T d1l7da1          29 PARVLVFGVGV-AGLQAIATAKRLGAVVMATDVRAATKEQVESL   71 (183)
T ss_dssp             CCEEEEECCSH-HHHHHHHHHHHTTCEEEEECSCSTTHHHHHHT
T ss_pred             CcEEEEEcCcH-HHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh
Confidence            34788998876 79999999999999999999 77776665543

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.94  E-value=0.053  Score=38.63  Aligned_cols=86  Identities=13%  Similarity=0.102  Sum_probs=47.7

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCC----CCCeEEEEEecCCCchHHHHHHH---HH
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKG----GQPVEVVGLDMEEDREGAFDEAV---DK   79 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~v~~~~---~~   79 (266)
                      +-|.|- |-+|..+|+.|+++|++|++.+ ++++.+++.+.-......    ..+..++.+=+.+.+  +++.++   +.
T Consensus         3 IgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~--~v~~v~~~~~~   79 (161)
T d1vpda2           3 VGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSP--HVKEVALGENG   79 (161)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHH--HHHHHHHSTTC
T ss_pred             EEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHH--HHHHHHhCCcc
Confidence            556655 6699999999999999999998 555554443211000000    012223333355555  666665   23


Q ss_pred             HHHHhCCCCEEEEcCCC
Q 024517           80 ACQILGNLDAFVHCYTY   96 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~   96 (266)
                      +.....+=+++|.+...
T Consensus        80 ~~~~~~~g~iiid~sT~   96 (161)
T d1vpda2          80 IIEGAKPGTVLIDMSSI   96 (161)
T ss_dssp             HHHHCCTTCEEEECSCC
T ss_pred             hhhccCCCCEEEECCCC
Confidence            44333334566666543

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.88  E-value=0.1  Score=39.81  Aligned_cols=33  Identities=24%  Similarity=0.276  Sum_probs=28.6

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG   36 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~   36 (266)
                      |++++|+|.|+ ||+|..++..|+..|. ++.++|
T Consensus        28 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD   61 (247)
T d1jw9b_          28 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLD   61 (247)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEC
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEEC
Confidence            56789999995 5599999999999999 788876

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=93.65  E-value=0.041  Score=39.14  Aligned_cols=31  Identities=10%  Similarity=0.005  Sum_probs=27.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecc
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE   38 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~   38 (266)
                      +++|.|+ |.+|..++..|++.|++|.+++|.
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~   32 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRV   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcC
Confidence            4888888 889999999999999999999843

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=93.60  E-value=0.088  Score=37.82  Aligned_cols=124  Identities=10%  Similarity=0.145  Sum_probs=64.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHc-----CCeEEEEe-cccccHHHHHHHhcccCC-CCCeEEEEEecCCCchHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKR-----GCRLVLVG-NERRLSSVAEKMMGSLKG-GQPVEVVGLDMEEDREGAFDEAV   77 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~-----g~~v~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~v~~~~   77 (266)
                      ..++.|.||++.-...+...++.+     +.++++.| ++++++...+.+...... +....+...  +|.     .+.+
T Consensus         3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~-----~eal   75 (167)
T d1u8xx1           3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDP-----EEAF   75 (167)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCH-----HHHH
T ss_pred             CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CCh-----hhcc
Confidence            345777788664333344444432     23799999 777776444443321110 123333221  121     1223


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccc----------------hHHHHHHHHHHHHHhccCCCCe
Q 024517           78 DKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINF----------------VAPWFLLKAVGRRMKESKAGGS  141 (266)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~----------------~~~~~l~~~~~~~~~~~~~~g~  141 (266)
                             ..-|++|..+|.. .      ....+-+..+..|.                ....-..+.+.+.+.+..+++-
T Consensus        76 -------~~AD~Vvitag~~-~------~~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~  141 (167)
T d1u8xx1          76 -------TDVDFVMAHIRVG-K------YAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAW  141 (167)
T ss_dssp             -------SSCSEEEECCCTT-H------HHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred             -------CCCCEEEECCCcC-C------CCceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeE
Confidence                   3679999999872 1      11122233333331                2334556677777777665678


Q ss_pred             EEEEeccc
Q 024517          142 IVFLTSII  149 (266)
Q Consensus       142 iv~iss~~  149 (266)
                      ++++|.+.
T Consensus       142 li~~TNPv  149 (167)
T d1u8xx1         142 MLNYSNPA  149 (167)
T ss_dssp             EEECCSCH
T ss_pred             EEEeCCHH
Confidence            88877743

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.40  E-value=0.2  Score=37.85  Aligned_cols=73  Identities=23%  Similarity=0.264  Sum_probs=52.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +.+++|=.|++.|   .++..|+++|++|+.++ ++..++...+.....   +.++.++..|+.+.+       +     
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~---~~~i~~~~~d~~~l~-------~-----  102 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKER---NLKIEFLQGDVLEIA-------F-----  102 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCCEEEESCGGGCC-------C-----
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccc---cccchheehhhhhcc-------c-----
Confidence            4678999999986   45667899999999999 665555555554432   357889999988765       1     


Q ss_pred             HhCCCCEEEEcCC
Q 024517           83 ILGNLDAFVHCYT   95 (266)
Q Consensus        83 ~~g~id~li~~ag   95 (266)
                       -+.+|.++..-+
T Consensus       103 -~~~fD~I~~~~~  114 (251)
T d1wzna1         103 -KNEFDAVTMFFS  114 (251)
T ss_dssp             -CSCEEEEEECSS
T ss_pred             -ccccchHhhhhh
Confidence             136898887643

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.38  E-value=0.17  Score=35.86  Aligned_cols=87  Identities=11%  Similarity=0.098  Sum_probs=47.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccC----CCCCeEEEEEecCCCchHHHHHHHHH--
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLK----GGQPVEVVGLDMEEDREGAFDEAVDK--   79 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~v~~~~~~--   79 (266)
                      +|-+.| .|-+|.++|++|+++|++|.+.+ +.++.+.....-.....    ......++..-+.+..  .++.++..  
T Consensus         3 kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~--~~~~v~~~~~   79 (162)
T d3cuma2           3 QIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQ--HVEGLYLDDD   79 (162)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHH--HHHHHHHSTT
T ss_pred             EEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchh--hHHHHHhccc
Confidence            455665 46699999999999999999988 54444333221100000    0112233334455555  56655543  


Q ss_pred             -HHHHhCCCCEEEEcCCC
Q 024517           80 -ACQILGNLDAFVHCYTY   96 (266)
Q Consensus        80 -~~~~~g~id~li~~ag~   96 (266)
                       +.....+=+++|.+...
T Consensus        80 ~~~~~l~~g~iiid~st~   97 (162)
T d3cuma2          80 GLLAHIAPGTLVLECSTI   97 (162)
T ss_dssp             CHHHHSCTTCEEEECSCC
T ss_pred             cccccCCCCCEEEECCCC
Confidence             33333333567766544

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.17  E-value=0.067  Score=36.24  Aligned_cols=32  Identities=22%  Similarity=0.361  Sum_probs=28.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      ++|+++|.||+ .+|..+|..|.+.|.+|.++.
T Consensus        29 ~~k~vvViGgG-~iG~E~A~~l~~~g~~Vtlie   60 (123)
T d1nhpa2          29 EVNNVVVIGSG-YIGIEAAEAFAKAGKKVTVID   60 (123)
T ss_dssp             TCCEEEEECCS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCEEEEECCh-HHHHHHHHHhhccceEEEEEE
Confidence            56788888765 599999999999999999987

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.16  E-value=0.58  Score=33.89  Aligned_cols=77  Identities=16%  Similarity=0.107  Sum_probs=52.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .+++||=.|++.|   .++..+++.+.+|+.++ ++...+...+.+....-...++.++..|+.+.-        .    
T Consensus        52 ~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~--------~----  116 (194)
T d1dusa_          52 KDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV--------K----  116 (194)
T ss_dssp             TTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC--------T----
T ss_pred             CCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhh--------c----
Confidence            5778898888877   34556777888999999 766555555544432222356888888886533        0    


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                       -+.+|.++.+..+
T Consensus       117 -~~~fD~Ii~~~p~  129 (194)
T d1dusa_         117 -DRKYNKIITNPPI  129 (194)
T ss_dssp             -TSCEEEEEECCCS
T ss_pred             -cCCceEEEEcccE
Confidence             1468999988644

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=92.87  E-value=0.072  Score=36.02  Aligned_cols=32  Identities=25%  Similarity=0.369  Sum_probs=28.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      .+|+++|.||+- +|..+|..|.++|.+|.++.
T Consensus        29 ~~~~vvIIGgG~-iG~E~A~~l~~~g~~Vtli~   60 (121)
T d1d7ya2          29 PQSRLLIVGGGV-IGLELAATARTAGVHVSLVE   60 (121)
T ss_dssp             TTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEE
T ss_pred             cCCeEEEECcch-hHHHHHHHhhcccceEEEEe
Confidence            367888888765 99999999999999999998

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=92.85  E-value=0.11  Score=37.63  Aligned_cols=78  Identities=19%  Similarity=0.123  Sum_probs=53.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccC----------CCCCeEEEEEecCCCchHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLK----------GGQPVEVVGLDMEEDREGA   72 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~   72 (266)
                      .+++||..|.+.|   ..+..|+++|++|+.+| +++.++...+.......          .+....++..|..+..  .
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~   94 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT--A   94 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST--H
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccc--c
Confidence            5789999999987   36779999999999999 77776666555532210          1345678888888766  1


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCC
Q 024517           73 FDEAVDKACQILGNLDAFVHCYT   95 (266)
Q Consensus        73 v~~~~~~~~~~~g~id~li~~ag   95 (266)
                          ...     ..+|.++....
T Consensus        95 ----~~~-----~~~D~i~~~~~  108 (201)
T d1pjza_          95 ----RDI-----GHCAAFYDRAA  108 (201)
T ss_dssp             ----HHH-----HSEEEEEEESC
T ss_pred             ----ccc-----cceeEEEEEee
Confidence                111     25677776543

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.75  E-value=0.23  Score=36.71  Aligned_cols=75  Identities=19%  Similarity=0.138  Sum_probs=52.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++.+||=.|++.|.   ++..|++.|++|+.+| +.+.++...+.....   +..+..+..|..+..       +.    
T Consensus        37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~---~~~~~~~~~d~~~l~-------~~----   99 (226)
T d1ve3a1          37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSR---ESNVEFIVGDARKLS-------FE----   99 (226)
T ss_dssp             SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCCEEEECCTTSCC-------SC----
T ss_pred             CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccc---ccccccccccccccc-------cc----
Confidence            34578999999875   6678889999999999 766666665555443   346777777877644       11    


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                       .+.+|+++.....
T Consensus       100 -~~~fD~I~~~~~l  112 (226)
T d1ve3a1         100 -DKTFDYVIFIDSI  112 (226)
T ss_dssp             -TTCEEEEEEESCG
T ss_pred             -CcCceEEEEecch
Confidence             1468998887544

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.67  E-value=0.2  Score=39.56  Aligned_cols=76  Identities=18%  Similarity=0.216  Sum_probs=51.8

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .++|+||-.|++.|+   ++..++++|+ +|+.++..+......+..... +...++.++..|+.+..  .         
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~~a~~~~~~~-~~~~~i~~~~~~~~~l~--~---------   98 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILYQAMDIIRLN-KLEDTITLIKGKIEEVH--L---------   98 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHHHHHHHHHHT-TCTTTEEEEESCTTTSC--C---------
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHHHHHHHHHHh-CCCccceEEEeeHHHhc--C---------
Confidence            478999999999885   6677888897 788888444444433333322 32467889988888765  1         


Q ss_pred             HHhCCCCEEEEcC
Q 024517           82 QILGNLDAFVHCY   94 (266)
Q Consensus        82 ~~~g~id~li~~a   94 (266)
                       ...++|+++...
T Consensus        99 -~~~~~D~Ivse~  110 (311)
T d2fyta1          99 -PVEKVDVIISEW  110 (311)
T ss_dssp             -SCSCEEEEEECC
T ss_pred             -ccccceEEEEee
Confidence             014789998763

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=92.66  E-value=0.56  Score=36.95  Aligned_cols=82  Identities=11%  Similarity=0.047  Sum_probs=48.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++++||=..+.+| |.  +..++..|++|+.++ +...++...+.+....-...++.++..|+.        +.+++...
T Consensus       132 ~~~rVLdlf~~tG-~~--sl~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~--------~~l~~~~~  200 (309)
T d2igta1         132 RPLKVLNLFGYTG-VA--SLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM--------KFIQREER  200 (309)
T ss_dssp             SCCEEEEETCTTC-HH--HHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH--------HHHHHHHH
T ss_pred             CCCeEEEecCCCc-HH--HHHHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH--------HhHHHHhh
Confidence            4677776666655 22  334567899999999 655555554444322111235677765554        34444444


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                      .-.++|+||.....
T Consensus       201 ~~~~fD~IilDPP~  214 (309)
T d2igta1         201 RGSTYDIILTDPPK  214 (309)
T ss_dssp             HTCCBSEEEECCCS
T ss_pred             cCCCCCEEEECCCc
Confidence            44679999998653

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.65  E-value=0.044  Score=39.94  Aligned_cols=33  Identities=21%  Similarity=0.297  Sum_probs=28.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEec
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGN   37 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~   37 (266)
                      .+|+|+|.||+- .|..+|..|+++|+ .|.++.+
T Consensus         3 ~~~kVaIIGaGp-aGl~aA~~l~~~G~~~V~v~E~   36 (196)
T d1gtea4           3 YSAKIALLGAGP-ASISCASFLARLGYSDITIFEK   36 (196)
T ss_dssp             GGCCEEEECCSH-HHHHHHHHHHHTTCCCEEEEES
T ss_pred             CCCEEEEECChH-HHHHHHHHHHHCCCCeEEEEEe
Confidence            578899999876 79999999999999 5888873

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.61  E-value=0.1  Score=35.16  Aligned_cols=32  Identities=22%  Similarity=0.338  Sum_probs=27.5

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      +|.++|.||+- +|..+|..|.+.|.+|.++.+
T Consensus        32 ~~~vvIiGgG~-iG~E~A~~l~~~g~~Vtlv~~   63 (122)
T d1xhca2          32 SGEAIIIGGGF-IGLELAGNLAEAGYHVKLIHR   63 (122)
T ss_dssp             HSEEEEEECSH-HHHHHHHHHHHTTCEEEEECS
T ss_pred             CCcEEEECCcH-HHHHHHHHhhcccceEEEEec
Confidence            46788887765 999999999999999999874

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=92.57  E-value=0.066  Score=39.00  Aligned_cols=34  Identities=24%  Similarity=0.323  Sum_probs=30.5

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      .++|+|+|.||+. -|.+.|..|+++|++|.+..+
T Consensus        41 ~~~k~V~IIGaGP-AGL~AA~~la~~G~~Vtl~E~   74 (179)
T d1ps9a3          41 VQKKNLAVVGAGP-AGLAFAINAAARGHQVTLFDA   74 (179)
T ss_dssp             SSCCEEEEECCSH-HHHHHHHHHHTTTCEEEEEES
T ss_pred             CCCcEEEEECccH-HHHHHHHHHHhhccceEEEec
Confidence            3678999999987 699999999999999999983

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.50  E-value=0.36  Score=36.05  Aligned_cols=42  Identities=21%  Similarity=0.188  Sum_probs=33.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKM   48 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~   48 (266)
                      .+.+||..|.+.|   ..+..|+++|++|+.+| +++..+...++.
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~   87 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ   87 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence            5678999999986   45888999999999999 777666555543

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=92.48  E-value=1.9  Score=33.85  Aligned_cols=82  Identities=13%  Similarity=-0.010  Sum_probs=51.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      +|++||=..+..| |.++  ..+..|+ .|+.++ +...++-..+.++...-...++.++..|+.+        .+++..
T Consensus       144 ~g~~VLdlf~~~G-~~sl--~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~--------~l~~~~  212 (317)
T d2b78a2         144 AGKTVLNLFSYTA-AFSV--AAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFD--------YFKYAR  212 (317)
T ss_dssp             BTCEEEEETCTTT-HHHH--HHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHH--------HHHHHH
T ss_pred             CCCceeecCCCCc-HHHH--HHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHH--------HHHHHH
Confidence            5788887766655 3333  3455787 688999 6666666555554322122467777766643        344444


Q ss_pred             HHhCCCCEEEEcCCC
Q 024517           82 QILGNLDAFVHCYTY   96 (266)
Q Consensus        82 ~~~g~id~li~~ag~   96 (266)
                      ....++|+||.....
T Consensus       213 ~~~~~fD~Ii~DPP~  227 (317)
T d2b78a2         213 RHHLTYDIIIIDPPS  227 (317)
T ss_dssp             HTTCCEEEEEECCCC
T ss_pred             hhcCCCCEEEEcChh
Confidence            444679999999654

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=92.44  E-value=0.35  Score=38.37  Aligned_cols=81  Identities=16%  Similarity=-0.004  Sum_probs=51.2

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .+|++||=.+++.| |.++  +++..+.+|+.++ +++.++...+.++.. + -.++.++..|..+.        .+...
T Consensus       144 ~~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~n-g-l~~~~~i~~d~~~~--------~~~~~  210 (318)
T d1wxxa2         144 FRGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLN-G-LGNVRVLEANAFDL--------LRRLE  210 (318)
T ss_dssp             CCEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHT-T-CTTEEEEESCHHHH--------HHHHH
T ss_pred             hCCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHc-C-CCCcceeeccHHHH--------hhhhH
Confidence            36788887777765 4444  3455567999999 766666655555432 2 13677777766542        23333


Q ss_pred             HHhCCCCEEEEcCCC
Q 024517           82 QILGNLDAFVHCYTY   96 (266)
Q Consensus        82 ~~~g~id~li~~ag~   96 (266)
                      ..-+++|.||.+...
T Consensus       211 ~~~~~fD~Vi~DpP~  225 (318)
T d1wxxa2         211 KEGERFDLVVLDPPA  225 (318)
T ss_dssp             HTTCCEEEEEECCCC
T ss_pred             hhhcCCCEEEEcCCc
Confidence            334579999999754

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=92.40  E-value=0.22  Score=35.37  Aligned_cols=85  Identities=18%  Similarity=0.120  Sum_probs=48.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEe-cccccHHHHHHHhcc---c-----CCCCCeEEEEEecCCCchHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC--RLVLVG-NERRLSSVAEKMMGS---L-----KGGQPVEVVGLDMEEDREGAFDE   75 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~--~v~~~~-~~~~~~~~~~~~~~~---~-----~~~~~~~~~~~D~~~~~~~~v~~   75 (266)
                      +++|.|. |-||.++|+.|.+.|+  +|+..+ +.+..+... +....   .     .......++.+ .+-++  ++.+
T Consensus         3 ~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~-~~~~~~~~~~~~~~~~~~~~dlIil-a~p~~--~~~~   77 (171)
T d2g5ca2           3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTTSIAKVEDFSPDFVML-SSPVR--TFRE   77 (171)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEESCGGGGGGTCCSEEEE-CSCHH--HHHH
T ss_pred             EEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHH-Hhhcchhhhhhhhhhhccccccccc-cCCch--hhhh
Confidence            5888875 7899999999999996  677777 444443332 22100   0     00011122222 12233  6777


Q ss_pred             HHHHHHHHhCCCCEEEEcCCC
Q 024517           76 AVDKACQILGNLDAFVHCYTY   96 (266)
Q Consensus        76 ~~~~~~~~~g~id~li~~ag~   96 (266)
                      .++++.....+=.+++...+.
T Consensus        78 vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhhccccccccccccccc
Confidence            888877766544566666544

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=92.40  E-value=0.11  Score=34.89  Aligned_cols=33  Identities=12%  Similarity=0.189  Sum_probs=28.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      ..+.++|.||+- ||..+|..|++.|.+|.++.+
T Consensus        21 ~p~~i~IiG~G~-ig~E~A~~l~~~G~~Vtiv~~   53 (119)
T d3lada2          21 VPGKLGVIGAGV-IGLELGSVWARLGAEVTVLEA   53 (119)
T ss_dssp             CCSEEEEECCSH-HHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCeEEEECCCh-HHHHHHHHHHHcCCceEEEEe
Confidence            357889998866 999999999999999999873

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=92.39  E-value=0.079  Score=40.08  Aligned_cols=33  Identities=27%  Similarity=0.453  Sum_probs=29.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      +.|+|+|.||+- .|.++|.+|+++|++|.++++
T Consensus         5 ~~~kVvVIGaGi-aGl~~A~~L~~~G~~V~vier   37 (268)
T d1c0pa1           5 SQKRVVVLGSGV-IGLSSALILARKGYSVHILAR   37 (268)
T ss_dssp             CSCEEEEECCSH-HHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCcEEEECccH-HHHHHHHHHHHCCCCEEEEeC
Confidence            556799999876 799999999999999999984

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.32  E-value=0.31  Score=38.13  Aligned_cols=22  Identities=9%  Similarity=0.045  Sum_probs=20.1

Q ss_pred             CchHHHHHHHHHHcCCeEEEEe
Q 024517           15 DEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus        15 ~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      |..|.++|++|..+|+.|+++.
T Consensus        46 Gk~G~alA~~~~~~Ga~V~li~   67 (290)
T d1p9oa_          46 GRRGATSAEAFLAAGYGVLFLY   67 (290)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEE
T ss_pred             hHHHHHHHHHHHHcCCEEEEEe
Confidence            5689999999999999999886

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=92.28  E-value=0.44  Score=34.02  Aligned_cols=85  Identities=11%  Similarity=0.124  Sum_probs=50.0

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccC---------------CCCCeEEEEEecCCCchH
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLK---------------GGQPVEVVGLDMEEDREG   71 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~D~~~~~~~   71 (266)
                      +-|. |.|.+|.++|++|+++|++|.+.+ ++++.+++.++-.....               .-.....+..-+....  
T Consensus         4 IGvI-GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   80 (178)
T d1pgja2           4 VGVV-GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGA--   80 (178)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSH--
T ss_pred             EEEE-eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcc--
Confidence            4444 456699999999999999999998 66666665544221000               0011122233333434  


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEcCC
Q 024517           72 AFDEAVDKACQILGNLDAFVHCYT   95 (266)
Q Consensus        72 ~v~~~~~~~~~~~g~id~li~~ag   95 (266)
                      .+...+......+.+=+++++...
T Consensus        81 ~~~~~~~~~~~~~~~~~iii~~st  104 (178)
T d1pgja2          81 ATDSTIEQLKKVFEKGDILVDTGN  104 (178)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEECCC
T ss_pred             hhhhhhhhhhhhccccceecccCc
Confidence            566666666665555566766653

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=92.25  E-value=0.089  Score=36.98  Aligned_cols=39  Identities=15%  Similarity=0.322  Sum_probs=29.5

Q ss_pred             EEEecCCCchHHHHHHHHHHcC-CeEEEEe-cccccHHHHHH
Q 024517            8 VLLTSDGDEISKNIAFHLAKRG-CRLVLVG-NERRLSSVAEK   47 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g-~~v~~~~-~~~~~~~~~~~   47 (266)
                      +.+.|+ |.+|.++++.|.+.| ++|++.+ ++++.+++.++
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            667766 779999999999988 7899888 55555554443

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=92.11  E-value=1.5  Score=31.84  Aligned_cols=94  Identities=12%  Similarity=0.086  Sum_probs=51.7

Q ss_pred             HhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEecccccccCCCCCchhh
Q 024517           83 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY  162 (266)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~y  162 (266)
                      ..+.++.+|+..+............        ...+...+.++|.+..    .....++++++.......   ..-..-
T Consensus        74 ~~~~~~~vv~l~~~~~~~~~~~~~~--------~~~~~~~l~l~qal~~----~~~~~~l~~vT~~a~~~~---~~d~~~  138 (209)
T d2fr1a2          74 SVGEVAGVLSLLAVDEAEPEEAPLA--------LASLADTLSLVQAMVS----AELGCPLWTVTESAVATG---PFERVR  138 (209)
T ss_dssp             TSCCCSEEEECTTTTCCCCSSCGGG--------CHHHHHHHHHHHHHHH----TTCCCCEEEEEESCSCSS---TTSCCS
T ss_pred             ccCCCCeEEEeCCCCCCCCcchhHH--------HHHHHHHHHHHHHHHh----CCCCCcEEEEEcCCcccC---CCcccC
Confidence            4467899999876532211111111        1113344555555432    222467777776433222   222233


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCCcEEEEEe
Q 024517          163 GACAASIHQLVRTAAMEIGKHKIRVNGIA  191 (266)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~  191 (266)
                      ....+++-+|+|.++.|+..-.++...+.
T Consensus       139 ~p~~A~l~Gl~r~~~~E~P~l~~~~vDl~  167 (209)
T d2fr1a2         139 NAAHGALWGVGRVIALENPAVWGGLVDVP  167 (209)
T ss_dssp             CGGGHHHHHHHHHHHHHCGGGEEEEEEEC
T ss_pred             CHhHHhHHHHHHHHHHhCCCceEEEEECC
Confidence            56789999999999999876445555553

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=91.95  E-value=0.083  Score=35.46  Aligned_cols=33  Identities=12%  Similarity=0.226  Sum_probs=28.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEecc
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE   38 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~   38 (266)
                      .|+++|.||+- +|..+|..|.+.|.+|.++.+.
T Consensus        22 p~~v~IiGgG~-iG~E~A~~l~~~g~~Vtlv~~~   54 (117)
T d1onfa2          22 SKKIGIVGSGY-IAVELINVIKRLGIDSYIFARG   54 (117)
T ss_dssp             CSEEEEECCSH-HHHHHHHHHHTTTCEEEEECSS
T ss_pred             CCEEEEECCch-HHHHHHHHHHhccccceeeehh
Confidence            46788888765 9999999999999999999843

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=91.91  E-value=0.092  Score=37.36  Aligned_cols=35  Identities=23%  Similarity=0.342  Sum_probs=31.0

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cc
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NE   38 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~   38 (266)
                      +.||+++|.|=+. +|+.+|+++...|++|+++. ++
T Consensus        21 laGk~vvV~GYG~-vGrG~A~~~rg~Ga~V~V~E~DP   56 (163)
T d1v8ba1          21 ISGKIVVICGYGD-VGKGCASSMKGLGARVYITEIDP   56 (163)
T ss_dssp             CTTSEEEEECCSH-HHHHHHHHHHHHTCEEEEECSCH
T ss_pred             ecCCEEEEecccc-cchhHHHHHHhCCCEEEEEecCc
Confidence            6799999998655 99999999999999999998 54

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.85  E-value=0.095  Score=40.40  Aligned_cols=34  Identities=24%  Similarity=0.200  Sum_probs=30.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      ++++|+++|-| .|.+|..+++.|.+.|++|+.++
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            57899999998 68899999999999999998775

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.71  E-value=0.1  Score=35.37  Aligned_cols=33  Identities=21%  Similarity=0.250  Sum_probs=28.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEecc
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNE   38 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~   38 (266)
                      .|+++|.||+- ||..+|..|.+.|.+|.++.+.
T Consensus        22 pk~vvIvGgG~-iG~E~A~~l~~~G~~Vtlv~~~   54 (125)
T d3grsa2          22 PGRSVIVGAGY-IAVEMAGILSALGSKTSLMIRH   54 (125)
T ss_dssp             CSEEEEECCSH-HHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCEEEEEcCCc-cHHHHHHHHhcCCcEEEEEeec
Confidence            47888998875 9999999999999999999843

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=91.50  E-value=0.11  Score=39.76  Aligned_cols=34  Identities=21%  Similarity=0.354  Sum_probs=30.5

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      +++||+++|-| .|.+|..+|+.|.+.|++|+.++
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            57899999997 67799999999999999998776

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=91.50  E-value=0.56  Score=31.03  Aligned_cols=81  Identities=20%  Similarity=0.201  Sum_probs=55.5

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ||++||.=-..-+-..+...|.+.|+.|+... +.   ++..+.+++.     +..++.+|+.-++.+. -.+++++++.
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~---~~al~~~~~~-----~~dliilD~~mp~~~G-~e~~~~ir~~   71 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNG---REAVEKYKEL-----KPDIVTMDITMPEMNG-IDAIKEIMKI   71 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSH---HHHHHHHHHH-----CCSEEEEECSCGGGCH-HHHHHHHHHH
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCH---HHHHHHHHhc-----cCCEEEEecCCCCCCH-HHHHHHHHHh
Confidence            78999999999999999999999999987543 33   3333344332     3455667776555323 3566777777


Q ss_pred             hCCCCEEEEcC
Q 024517           84 LGNLDAFVHCY   94 (266)
Q Consensus        84 ~g~id~li~~a   94 (266)
                      ..++-+++..+
T Consensus        72 ~~~~pvi~ls~   82 (118)
T d1u0sy_          72 DPNAKIIVCSA   82 (118)
T ss_dssp             CTTCCEEEEEC
T ss_pred             CCCCcEEEEEc
Confidence            77777777653

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=91.42  E-value=0.063  Score=39.47  Aligned_cols=31  Identities=13%  Similarity=0.247  Sum_probs=27.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      +++.|.|++. .|.++|..|++.|++|.+.++
T Consensus         8 ~KI~ViGaG~-wGtAlA~~La~~g~~V~l~~r   38 (189)
T d1n1ea2           8 NKAVVFGSGA-FGTALAMVLSKKCREVCVWHM   38 (189)
T ss_dssp             EEEEEECCSH-HHHHHHHHHHTTEEEEEEECS
T ss_pred             ceEEEECCCH-HHHHHHHHHHHcCCeEEEEEe
Confidence            3588888877 899999999999999999884

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.26  E-value=0.17  Score=34.12  Aligned_cols=32  Identities=19%  Similarity=0.311  Sum_probs=28.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      .|+++|.||+- ||..+|..|.+.|++|.++.+
T Consensus        23 p~~~vIiG~G~-ig~E~A~~l~~lG~~Vtii~~   54 (122)
T d1v59a2          23 PKRLTIIGGGI-IGLEMGSVYSRLGSKVTVVEF   54 (122)
T ss_dssp             CSEEEEECCSH-HHHHHHHHHHHTTCEEEEECS
T ss_pred             CCeEEEECCCc-hHHHHHHHHHhhCcceeEEEe
Confidence            46788888765 999999999999999999873

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=91.19  E-value=0.14  Score=34.20  Aligned_cols=32  Identities=13%  Similarity=0.218  Sum_probs=28.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      .+|.++|.||+- ||..+|..|.+.|.+|.++.
T Consensus        21 ~~~~vvVvGgG~-ig~E~A~~l~~~g~~vt~i~   52 (121)
T d1mo9a2          21 PGSTVVVVGGSK-TAVEYGCFFNATGRRTVMLV   52 (121)
T ss_dssp             CCSEEEEECCSH-HHHHHHHHHHHTTCEEEEEC
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHhcchhheEee
Confidence            468888888765 99999999999999999987

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=91.17  E-value=0.13  Score=34.32  Aligned_cols=32  Identities=19%  Similarity=0.216  Sum_probs=27.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      .|+++|.||+- +|..+|..|.+.|.+|.++.+
T Consensus        21 p~~vvIiGgG~-ig~E~A~~l~~~G~~Vtlve~   52 (116)
T d1gesa2          21 PERVAVVGAGY-IGVELGGVINGLGAKTHLFEM   52 (116)
T ss_dssp             CSEEEEECCSH-HHHHHHHHHHHTTCEEEEECS
T ss_pred             CCEEEEECCCh-hhHHHHHHhhccccEEEEEee
Confidence            36778877755 999999999999999999984

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=91.13  E-value=0.086  Score=38.98  Aligned_cols=32  Identities=22%  Similarity=0.253  Sum_probs=28.1

Q ss_pred             CcEEEEecCCCchHHH-----HHHHHHHcCCeEEEEe
Q 024517            5 AKRVLLTSDGDEISKN-----IAFHLAKRGCRLVLVG   36 (266)
Q Consensus         5 ~k~vlItGa~~giG~~-----ia~~l~~~g~~v~~~~   36 (266)
                      .|++.|||.++|+|+.     +|..|+++|++|.+++
T Consensus         1 ~~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           1 SKRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             CEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             CceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            3889999999999985     6788999999999876

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.06  E-value=0.35  Score=34.80  Aligned_cols=43  Identities=14%  Similarity=0.285  Sum_probs=32.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcc
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGS   51 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~   51 (266)
                      ++.|.|++. .|.++|..|++.|.+|.+.+|... ++..+.+.+.
T Consensus         2 kI~ViGaG~-~GtalA~~la~~g~~V~l~~r~~~-~~~~~~i~~~   44 (180)
T d1txga2           2 IVSILGAGA-MGSALSVPLVDNGNEVRIWGTEFD-TEILKSISAG   44 (180)
T ss_dssp             EEEEESCCH-HHHHHHHHHHHHCCEEEEECCGGG-HHHHHHHHTT
T ss_pred             EEEEECCCH-HHHHHHHHHHHCCCEEEEEEeccc-HHHHHHHhhh
Confidence            467888755 899999999999999999885332 3455666543

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=90.96  E-value=0.078  Score=41.10  Aligned_cols=37  Identities=16%  Similarity=0.252  Sum_probs=31.9

Q ss_pred             CCCcEEEEecCCCchHHHH-----HHHHHHcCCeEEEEe-ccc
Q 024517            3 NQAKRVLLTSDGDEISKNI-----AFHLAKRGCRLVLVG-NER   39 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~i-----a~~l~~~g~~v~~~~-~~~   39 (266)
                      -++++++|+.|=||+|+..     |..|+++|.+|+++| ++.
T Consensus        17 ~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          17 RNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             cCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            3678888998899999986     799999999999999 654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=90.95  E-value=0.13  Score=34.23  Aligned_cols=32  Identities=16%  Similarity=0.342  Sum_probs=27.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      .|+++|.||+- +|..+|..|.+.|++|.++.+
T Consensus        21 p~~vvIiGgG~-~G~E~A~~l~~~g~~Vtlve~   52 (115)
T d1lvla2          21 PQHLVVVGGGY-IGLELGIAYRKLGAQVSVVEA   52 (115)
T ss_dssp             CSEEEEECCSH-HHHHHHHHHHHHTCEEEEECS
T ss_pred             CCeEEEECCCH-HHHHHHHHHhhcccceEEEee
Confidence            46778887654 999999999999999999873

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=90.66  E-value=0.15  Score=31.40  Aligned_cols=52  Identities=15%  Similarity=0.172  Sum_probs=38.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCc
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDR   69 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   69 (266)
                      |++.|.|+++ +|+-++.+-.+.|.+|++.+ +.+....           .....++.++..+..
T Consensus         2 k~vgIlG~GQ-LgrMl~~Aa~~LG~~v~vldp~~~~pa~-----------~~a~dvIT~e~E~~~   54 (78)
T d3etja2           2 KQVCVLGNGQ-LGRMLRQAGEPLGIAVWPVGLDAEPAAV-----------PFQQSVITAEIERWP   54 (78)
T ss_dssp             EEEEEEBCSH-HHHHHHHHHGGGTEEEEEECTTSCGGGS-----------CGGGSEEEESSSCCC
T ss_pred             CEEEEEcCCH-HHHHHHHHHHHcCCEEEEEcCCCCCccc-----------ccccceEEEeeccCC
Confidence            6889999877 99999999999999999998 4433221           023357777888765

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.60  E-value=0.3  Score=34.08  Aligned_cols=33  Identities=27%  Similarity=0.398  Sum_probs=27.0

Q ss_pred             CcEEEEe-cCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            5 AKRVLLT-SDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         5 ~k~vlIt-Ga~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      ++.++|. .+++.||..+|..|+++|++|.++.+
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~   72 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSG   72 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEec
Confidence            4555555 46688999999999999999999973

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.59  E-value=0.099  Score=35.32  Aligned_cols=32  Identities=16%  Similarity=0.151  Sum_probs=27.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      .+.++|.||+- ||..+|..|.+.|.+|.++.+
T Consensus        20 P~~vvIIGgG~-iG~E~A~~l~~lG~~Vtii~~   51 (122)
T d1h6va2          20 PGKTLVVGASY-VALECAGFLAGIGLDVTVMVR   51 (122)
T ss_dssp             CCSEEEECCSH-HHHHHHHHHHHTTCCEEEEES
T ss_pred             CCeEEEECCCc-cHHHHHHHHhhcCCeEEEEEe
Confidence            35688888765 999999999999999998873

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.56  E-value=0.14  Score=37.84  Aligned_cols=32  Identities=16%  Similarity=0.139  Sum_probs=26.4

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEe-cccc
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERR   40 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~   40 (266)
                      +.|. |.|.+|..+|..|+++|++|++.| +.++
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~   35 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTK   35 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHH
Confidence            5566 556699999999999999999999 5443

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=90.55  E-value=0.11  Score=40.60  Aligned_cols=33  Identities=21%  Similarity=0.359  Sum_probs=29.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      +.|+|+|+||+- -|..+|.+|+++|++|.++..
T Consensus        29 ~pkkV~IIGaG~-aGLsaA~~L~~~G~~V~vlE~   61 (370)
T d2iida1          29 NPKHVVIVGAGM-AGLSAAYVLAGAGHQVTVLEA   61 (370)
T ss_dssp             SCCEEEEECCBH-HHHHHHHHHHHHTCEEEEECS
T ss_pred             CCCeEEEECCCH-HHHHHHHHHHHCCCCEEEEeC
Confidence            457899999987 599999999999999999983

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=90.41  E-value=0.73  Score=32.14  Aligned_cols=44  Identities=11%  Similarity=0.167  Sum_probs=31.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHc--CCeEEEEecccccHHHHHHHh
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKR--GCRLVLVGNERRLSSVAEKMM   49 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~--g~~v~~~~~~~~~~~~~~~~~   49 (266)
                      |++.|.|+||.||.....-..++  .++|+.+.-....+.+.+++.
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~   47 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCL   47 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHH
Confidence            57999999999999999988887  467876652222334444443

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=90.16  E-value=0.19  Score=34.33  Aligned_cols=33  Identities=18%  Similarity=0.295  Sum_probs=28.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      ++|+++|.||+- +|..+|..|.+.|.+|.++.+
T Consensus        34 ~~k~v~VIGgG~-iG~E~A~~l~~~g~~Vtvie~   66 (133)
T d1q1ra2          34 ADNRLVVIGGGY-IGLEVAATAIKANMHVTLLDT   66 (133)
T ss_dssp             TTCEEEEECCSH-HHHHHHHHHHHTTCEEEEECS
T ss_pred             cCCEEEEECCch-HHHHHHHHHHhhCcceeeeee
Confidence            467888887755 999999999999999999883

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=90.12  E-value=0.48  Score=34.56  Aligned_cols=79  Identities=16%  Similarity=0.207  Sum_probs=52.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      ++=+|.|+||...++.+.+ . +.+|+.+| +++.++...+.+.. +  +.++.++..+.++..  .   .++..  ..+
T Consensus        27 ~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~-~--~~r~~~~~~~f~~~~--~---~~~~~--~~~   94 (192)
T d1m6ya2          27 ILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKE-F--SDRVSLFKVSYREAD--F---LLKTL--GIE   94 (192)
T ss_dssp             EEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGG-G--TTTEEEEECCGGGHH--H---HHHHT--TCS
T ss_pred             EEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhcc-c--cccccchhHHHhhHH--H---HHHHc--CCC
Confidence            3445777787778887776 3 46899999 66665555555543 3  357899998887644  2   22221  135


Q ss_pred             CCCEEEEcCCCC
Q 024517           86 NLDAFVHCYTYE   97 (266)
Q Consensus        86 ~id~li~~ag~~   97 (266)
                      ++|.++...|++
T Consensus        95 ~vdgIl~DlGvS  106 (192)
T d1m6ya2          95 KVDGILMDLGVS  106 (192)
T ss_dssp             CEEEEEEECSCC
T ss_pred             Ccceeeeccchh
Confidence            899999999884

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.04  E-value=0.17  Score=38.04  Aligned_cols=32  Identities=22%  Similarity=0.282  Sum_probs=29.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      ++|+++|.||+- .|...|..|+++|++|.++.
T Consensus        48 ~~k~VvIIGaGp-AGl~aA~~l~~~G~~v~l~E   79 (233)
T d1djqa3          48 NKDSVLIVGAGP-SGSEAARVLMESGYTVHLTD   79 (233)
T ss_dssp             SCCEEEEECCSH-HHHHHHHHHHHTTCEEEEEC
T ss_pred             CCceEEEEcccH-HHHHHHHHHHHhccceeeEe
Confidence            578999999987 59999999999999999997

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.03  E-value=0.56  Score=36.94  Aligned_cols=75  Identities=17%  Similarity=0.204  Sum_probs=50.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      +||+||-.|++.|+   ++..++++|+ +|+.++..+......+.+. ..+-..++.++..|+.+.+  .          
T Consensus        33 ~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~~~~a~~~~~-~n~~~~~v~~~~~~~~~~~--~----------   96 (316)
T d1oria_          33 KDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSISDYAVKIVK-ANKLDHVVTIIKGKVEEVE--L----------   96 (316)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTTHHHHHHHHH-HTTCTTTEEEEESCTTTCC--C----------
T ss_pred             CcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHHHhhhhhHHH-HhCCccccceEeccHHHcc--c----------
Confidence            68999999999885   5667888887 6888884344444333333 2222357889988888765  1          


Q ss_pred             HhCCCCEEEEcC
Q 024517           83 ILGNLDAFVHCY   94 (266)
Q Consensus        83 ~~g~id~li~~a   94 (266)
                      ..+++|+++...
T Consensus        97 ~~~~~D~ivs~~  108 (316)
T d1oria_          97 PVEKVDIIISEW  108 (316)
T ss_dssp             SSSCEEEEEECC
T ss_pred             ccceeEEEeeee
Confidence            014689998764

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=89.72  E-value=0.87  Score=30.08  Aligned_cols=81  Identities=16%  Similarity=0.163  Sum_probs=55.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      +|+|||.=-...+-..+.+.|.+.|+.|..+.+.+.   ..+.+++.     +...+.+|+.-++.+. -.+++++++..
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~e---al~~~~~~-----~~dlillD~~mP~~~G-~el~~~lr~~~   71 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQ---ALDIVTKE-----RPDLVLLDMKIPGMDG-IEILKRMKVID   71 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHH---HHHHHHHH-----CCSEEEEESCCTTCCH-HHHHHHHHHHC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHH---HHHHHHhC-----CCCEEEEeccCCCCCH-HHHHHHHHHhC
Confidence            578999999999999999999999999987764332   33333332     3345666777554323 35677777776


Q ss_pred             CCCCEEEEcC
Q 024517           85 GNLDAFVHCY   94 (266)
Q Consensus        85 g~id~li~~a   94 (266)
                      ..+-+++..+
T Consensus        72 ~~~pvi~lt~   81 (119)
T d1peya_          72 ENIRVIIMTA   81 (119)
T ss_dssp             TTCEEEEEES
T ss_pred             CCCcEEEEec
Confidence            6676776654

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=89.69  E-value=0.19  Score=38.04  Aligned_cols=34  Identities=12%  Similarity=0.136  Sum_probs=29.8

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      ...++|+|.||+- -|..+|..|+++|.+|+++.+
T Consensus         2 ~~~~kV~IiGaG~-aGl~~A~~L~~~G~~v~v~Er   35 (265)
T d2voua1           2 PTTDRIAVVGGSI-SGLTAALMLRDAGVDVDVYER   35 (265)
T ss_dssp             CCCSEEEEECCSH-HHHHHHHHHHHTTCEEEEECS
T ss_pred             CCCCcEEEECcCH-HHHHHHHHHHHCCCCEEEEeC
Confidence            3567899999987 599999999999999999983

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=89.64  E-value=0.17  Score=35.47  Aligned_cols=40  Identities=18%  Similarity=0.282  Sum_probs=29.9

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHH
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKM   48 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~   48 (266)
                      +.+. |.|.+|.++++.|.+.|+++++.+ +.++.+++.++.
T Consensus         3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            4555 556699999999999999999988 555555554443

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=89.62  E-value=0.17  Score=34.12  Aligned_cols=32  Identities=16%  Similarity=0.279  Sum_probs=28.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      .|+++|.||+- ||..+|..|.+.|.+|.++.+
T Consensus        25 p~~~viiG~G~-iglE~A~~~~~~G~~Vtvi~~   56 (123)
T d1dxla2          25 PKKLVVIGAGY-IGLEMGSVWGRIGSEVTVVEF   56 (123)
T ss_dssp             CSEEEESCCSH-HHHHHHHHHHHHTCEEEEECS
T ss_pred             CCeEEEEccch-HHHHHHHHHHhcCCeEEEEEE
Confidence            56788888765 999999999999999999873

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=89.57  E-value=0.83  Score=36.14  Aligned_cols=118  Identities=18%  Similarity=0.079  Sum_probs=63.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      .|++||=.+++.| |.++  .++..|+ +|+.++ +++.++...+.+... +-..++.++..|+.+        ......
T Consensus       145 ~g~~VLDl~~g~G-~~si--~~a~~ga~~V~~vD~s~~al~~a~~N~~~n-gl~~~~~~~~~d~~~--------~~~~~~  212 (324)
T d2as0a2         145 PGDRVLDVFTYTG-GFAI--HAAIAGADEVIGIDKSPRAIETAKENAKLN-GVEDRMKFIVGSAFE--------EMEKLQ  212 (324)
T ss_dssp             TTCEEEETTCTTT-HHHH--HHHHTTCSEEEEEESCHHHHHHHHHHHHHT-TCGGGEEEEESCHHH--------HHHHHH
T ss_pred             CCCeeecccCccc-chhh--hhhhcCCcEEEeecCCHHHHHHHHHHHHHc-CCCccceeeechhhh--------hhHHHH
Confidence            4788888887755 2222  3456677 799999 666555555554422 111356666655443        233333


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHccchHHHHHHHHHHHHHhccCCCCeEEEEec
Q 024517           82 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTS  147 (266)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~iss  147 (266)
                      ....++|+||.+......       ..++....    ......+++.+.+.++.   +|.+++.|.
T Consensus       213 ~~~~~fD~Vi~DpP~~~~-------~~~~~~~~----~~~y~~l~~~a~~ll~p---GG~lv~~s~  264 (324)
T d2as0a2         213 KKGEKFDIVVLDPPAFVQ-------HEKDLKAG----LRAYFNVNFAGLNLVKD---GGILVTCSC  264 (324)
T ss_dssp             HTTCCEEEEEECCCCSCS-------SGGGHHHH----HHHHHHHHHHHHTTEEE---EEEEEEEEC
T ss_pred             hccCCCCchhcCCccccC-------CHHHHHHH----HHHHHHHHHHHHHHcCC---CcEEEEEeC
Confidence            344679999998754321       11122211    12334456666665543   566666554

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=89.49  E-value=0.14  Score=39.25  Aligned_cols=29  Identities=28%  Similarity=0.355  Sum_probs=26.0

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      |+|.||+- +|.++|.+|+++|.+|+++++
T Consensus         7 vvIIGaGi-~Gls~A~~La~~G~~V~vlE~   35 (276)
T d1ryia1           7 AVVIGGGI-IGSAIAYYLAKENKNTALFES   35 (276)
T ss_dssp             EEEECCSH-HHHHHHHHHHHTTCCEEEECS
T ss_pred             EEEECcCH-HHHHHHHHHHHCCCcEEEEeC
Confidence            78888766 899999999999999999984

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=89.45  E-value=0.19  Score=35.48  Aligned_cols=32  Identities=13%  Similarity=0.180  Sum_probs=27.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC--eEEEEe
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC--RLVLVG   36 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~--~v~~~~   36 (266)
                      .||+++|.||+- +|..+|..|.+++.  +|++++
T Consensus         1 ~gkrivIvGgG~-~G~e~A~~l~~~~~~~~Vtlie   34 (186)
T d1fcda1           1 AGRKVVVVGGGT-GGATAAKYIKLADPSIEVTLIE   34 (186)
T ss_dssp             CCCEEEEECCSH-HHHHHHHHHHHHCTTSEEEEEC
T ss_pred             CCCcEEEECccH-HHHHHHHHHHHcCCCCcEEEEE
Confidence            489999999987 79999999999885  677776

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=89.42  E-value=0.43  Score=34.08  Aligned_cols=124  Identities=11%  Similarity=0.091  Sum_probs=64.6

Q ss_pred             cEEEEecCCCchHHH--HHHHHHHc----CCeEEEEe-cccccHHHHHHHhcccC-CCCCeEEEEEecCCCchHHHHHHH
Q 024517            6 KRVLLTSDGDEISKN--IAFHLAKR----GCRLVLVG-NERRLSSVAEKMMGSLK-GGQPVEVVGLDMEEDREGAFDEAV   77 (266)
Q Consensus         6 k~vlItGa~~giG~~--ia~~l~~~----g~~v~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~v~~~~   77 (266)
                      -++.|.|| |.+|..  +...++..    +.++++.| ++++++.....++.... .+....+..  .+|.+     +.+
T Consensus         3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~--~td~~-----eaL   74 (171)
T d1obba1           3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK--TMNLD-----DVI   74 (171)
T ss_dssp             CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE--ESCHH-----HHH
T ss_pred             cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEE--eCChh-----hcc
Confidence            35778886 446654  44445533    35899999 77766554433332111 012333322  22322     233


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHH-----------cc---------chHHHHHHHHHHHHHhccC
Q 024517           78 DKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVK-----------IN---------FVAPWFLLKAVGRRMKESK  137 (266)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~-----------~n---------~~~~~~l~~~~~~~~~~~~  137 (266)
                             ...|++++.++.. ....   . ..+....+.           .+         .....-..+.+.+.+.+..
T Consensus        75 -------~dad~Vv~~~~~g-~~~~---~-~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~  142 (171)
T d1obba1          75 -------IDADFVINTAMVG-GHTY---L-EKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLS  142 (171)
T ss_dssp             -------TTCSEEEECCCTT-HHHH---H-HHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHC
T ss_pred             -------cCCCeEeeecccc-cccc---e-eeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHC
Confidence                   3679999998762 1100   0 000111111           11         2346677888888887766


Q ss_pred             CCCeEEEEeccc
Q 024517          138 AGGSIVFLTSII  149 (266)
Q Consensus       138 ~~g~iv~iss~~  149 (266)
                      +++.++++|.+.
T Consensus       143 p~a~~i~~TNPv  154 (171)
T d1obba1         143 PKAWYLQAANPI  154 (171)
T ss_dssp             TTCEEEECSSCH
T ss_pred             cCeEEEEECChH
Confidence            567888888753

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.33  E-value=2.2  Score=30.02  Aligned_cols=121  Identities=12%  Similarity=0.058  Sum_probs=60.8

Q ss_pred             EEEEecC-CCchHHHHHHHHHHcC----CeEEEEe-ccccc-HHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            7 RVLLTSD-GDEISKNIAFHLAKRG----CRLVLVG-NERRL-SSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         7 ~vlItGa-~~giG~~ia~~l~~~g----~~v~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++.|.|| +.|.+..++..+....    .++++.| ++++. .+..+...+...............+|..     +.+  
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~-----~al--   75 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRR-----RAL--   75 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHH-----HHH--
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCch-----hhc--
Confidence            4667776 4566677766666432    3788888 55331 2222222111100011222222334322     122  


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCCCCCCHHHHHHHHHc--c----------------chHHHHHHHHHHHHHhccCCCCe
Q 024517           80 ACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKI--N----------------FVAPWFLLKAVGRRMKESKAGGS  141 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~--n----------------~~~~~~l~~~~~~~~~~~~~~g~  141 (266)
                           ..-|++|+.++....         +.+.....+  |                .....-+.+.+.+.+.+..+++.
T Consensus        76 -----~gaDvVv~ta~~~~~---------~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~  141 (169)
T d1s6ya1          76 -----DGADFVTTQFRVGGL---------EARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAW  141 (169)
T ss_dssp             -----TTCSEEEECCCTTHH---------HHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred             -----CCCCEEEEccccCCC---------CCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeE
Confidence                 357999999987311         111111111  1                13445667777887777665677


Q ss_pred             EEEEecc
Q 024517          142 IVFLTSI  148 (266)
Q Consensus       142 iv~iss~  148 (266)
                      ++++|.+
T Consensus       142 ~i~vtNP  148 (169)
T d1s6ya1         142 LINFTNP  148 (169)
T ss_dssp             EEECSSS
T ss_pred             EEEeCCh
Confidence            7777764

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=89.28  E-value=0.24  Score=38.70  Aligned_cols=34  Identities=18%  Similarity=0.132  Sum_probs=30.2

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      +++||+++|-|- |.+|..+|+.|.+.|++|+.++
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            478999999886 5799999999999999999776

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=89.20  E-value=0.46  Score=33.19  Aligned_cols=46  Identities=11%  Similarity=0.203  Sum_probs=33.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHc--CCeEEEEecccccHHHHHHHh
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKR--GCRLVLVGNERRLSSVAEKMM   49 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~--g~~v~~~~~~~~~~~~~~~~~   49 (266)
                      +-|++.|.|+||.||.....-+.++  .++|+.+.-....+.+.+++.
T Consensus         1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~   48 (150)
T d1r0ka2           1 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAK   48 (150)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHH
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHH
Confidence            4589999999999999999988876  578887662233444444444

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=89.17  E-value=1.4  Score=30.76  Aligned_cols=84  Identities=17%  Similarity=0.139  Sum_probs=53.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCc-hHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDR-EGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~v~~~~~~~~~   82 (266)
                      +|+++.|.+.++|.|--++-.+...|.++--.     .+++.+++++..+.. -..--++|++-.. .+...++++.+.+
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l-----~~~t~~~L~~~lp~~-~~~~NPlD~~~~~~~~~~~~~l~~~~~   75 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLATL-----EEKTIEELRSFLPPM-AAVKNPVDMIASARGEDYYRTAKLLLQ   75 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECCC-----CHHHHHHHHHHSCTT-CEESSEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCCC-----CHHHHHHHHHhCCCc-ccCCCcccccCCCCHHHHHHHHHHHHc
Confidence            68999999999999999999999999666533     245555665555532 2223356665322 1145555554444


Q ss_pred             HhCCCCEEEEcC
Q 024517           83 ILGNLDAFVHCY   94 (266)
Q Consensus        83 ~~g~id~li~~a   94 (266)
                      . +.+|.++...
T Consensus        76 d-~~vd~v~v~~   86 (163)
T d2csua3          76 D-PNVDMLIAIC   86 (163)
T ss_dssp             S-TTCSEEEEEE
T ss_pred             C-CCcCEEEEee
Confidence            3 6789876543

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=89.16  E-value=0.49  Score=36.19  Aligned_cols=73  Identities=19%  Similarity=0.245  Sum_probs=48.9

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ..|++||=.|.++|+   ++..+++.|++|+.+| +++..+...+.++..   +.+..++..|+.+        .+    
T Consensus       119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n---~~~~~~~~~d~~~--------~~----  180 (254)
T d2nxca1         119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRN---GVRPRFLEGSLEA--------AL----  180 (254)
T ss_dssp             CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHT---TCCCEEEESCHHH--------HG----
T ss_pred             CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHc---CCceeEEeccccc--------cc----
Confidence            468899999999985   3446778899999999 777776666555433   3455555544321        11    


Q ss_pred             HHhCCCCEEEEcC
Q 024517           82 QILGNLDAFVHCY   94 (266)
Q Consensus        82 ~~~g~id~li~~a   94 (266)
                       ..+++|.++.|.
T Consensus       181 -~~~~fD~V~ani  192 (254)
T d2nxca1         181 -PFGPFDLLVANL  192 (254)
T ss_dssp             -GGCCEEEEEEEC
T ss_pred             -cccccchhhhcc
Confidence             126799998773

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=89.07  E-value=0.18  Score=39.90  Aligned_cols=32  Identities=22%  Similarity=0.439  Sum_probs=28.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      +.|.++|.||+= -|..+|.+|+++|.+|.++.
T Consensus         1 k~KKI~IIGaG~-sGL~aA~~L~k~G~~V~viE   32 (314)
T d2bi7a1           1 KSKKILIVGAGF-SGAVIGRQLAEKGHQVHIID   32 (314)
T ss_dssp             CCCEEEEECCSH-HHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCEEEEECCcH-HHHHHHHHHHhCCCCEEEEE
Confidence            468899999886 59999999999999999998

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=89.03  E-value=0.29  Score=34.09  Aligned_cols=28  Identities=25%  Similarity=0.262  Sum_probs=23.8

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      +-|. |.|.+|.++++.|.++|+.|+..+
T Consensus         3 IgiI-G~G~mG~~ia~~l~~~g~~v~~~~   30 (152)
T d1i36a2           3 VGFI-GFGEVAQTLASRLRSRGVEVVTSL   30 (152)
T ss_dssp             EEEE-SCSHHHHHHHHHHHHTTCEEEECC
T ss_pred             EEEE-cHHHHHHHHHHHHHHCCCeEEEEc
Confidence            4455 558899999999999999998887

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=88.86  E-value=0.31  Score=32.89  Aligned_cols=31  Identities=23%  Similarity=0.336  Sum_probs=27.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      .+.++|.||+- ||..+|..|.+.|.+|.++.
T Consensus        26 p~~vvIiGgG~-IG~E~A~~~~~~G~~Vtive   56 (125)
T d1ojta2          26 PGKLLIIGGGI-IGLEMGTVYSTLGSRLDVVE   56 (125)
T ss_dssp             CSEEEEESCSH-HHHHHHHHHHHHTCEEEEEC
T ss_pred             CCeEEEECCCH-HHHHHHHHhhcCCCEEEEEE
Confidence            57888888765 99999999999999999987

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=88.84  E-value=0.91  Score=30.16  Aligned_cols=82  Identities=16%  Similarity=0.073  Sum_probs=58.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +..++||.--...+...+...|.+.|++|..+.+.   ++..+.+++     .....+.+|+.-++.+. ..++.++++.
T Consensus         2 ~k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~---~~a~~~l~~-----~~~dlii~D~~mp~~~G-~el~~~l~~~   72 (123)
T d1krwa_           2 QRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENG---NEVLAALAS-----KTPDVLLSDIRMPGMDG-LALLKQIKQR   72 (123)
T ss_dssp             CCCEEEEESSSHHHHHHHHHHHHHTTCEEEEESSS---HHHHHHHTT-----CCCSEEEECCSSSSSTT-HHHHHHHHHH
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCH---HHHHHHHHh-----CCCCEEEehhhcCCchH-HHHHHHHHHh
Confidence            35679999999999999999999999999877643   344444443     35567778877655323 3467777777


Q ss_pred             hCCCCEEEEcC
Q 024517           84 LGNLDAFVHCY   94 (266)
Q Consensus        84 ~g~id~li~~a   94 (266)
                      +..+-+++..+
T Consensus        73 ~~~~piI~~t~   83 (123)
T d1krwa_          73 HPMLPVIIMTA   83 (123)
T ss_dssp             SSSCCEEESCC
T ss_pred             CCCCeEEEEec
Confidence            76676666554

>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein FixJ, receiver domain
species: Rhizobium meliloti [TaxId: 382]

Probab=88.84  E-value=1.2  Score=29.54  Aligned_cols=82  Identities=16%  Similarity=0.131  Sum_probs=57.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      +..++||.=-...+...+...|...|+.|..+.+.   ++..+.+.+     .+...+.+|+.-++.+. -.+++++++.
T Consensus         2 ~~~~ILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~---~~al~~~~~-----~~~dlvi~D~~mp~~~G-~e~~~~lr~~   72 (123)
T d1dbwa_           2 QDYTVHIVDDEEPVRKSLAFMLTMNGFAVKMHQSA---EAFLAFAPD-----VRNGVLVTDLRMPDMSG-VELLRNLGDL   72 (123)
T ss_dssp             CCCEEEEEESSHHHHHHHHHHHHHTTCEEEEESCH---HHHHHHGGG-----CCSEEEEEECCSTTSCH-HHHHHHHHHT
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCH---HHHHHHHhh-----cCCcEEEEeccCccccc-hHHHHHHHhc
Confidence            46789999999999999999999999998876543   333444433     35567778887655333 3567777776


Q ss_pred             hCCCCEEEEcC
Q 024517           84 LGNLDAFVHCY   94 (266)
Q Consensus        84 ~g~id~li~~a   94 (266)
                      ...+-+++..+
T Consensus        73 ~~~~~iI~lt~   83 (123)
T d1dbwa_          73 KINIPSIVITG   83 (123)
T ss_dssp             TCCCCEEEEEC
T ss_pred             CCCCeEEEEEe
Confidence            66677776664

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=88.62  E-value=0.25  Score=38.94  Aligned_cols=31  Identities=26%  Similarity=0.563  Sum_probs=22.7

Q ss_pred             cEEEEecCCCchHH-----HHHHHHHHcCCeEEEEec
Q 024517            6 KRVLLTSDGDEISK-----NIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         6 k~vlItGa~~giG~-----~ia~~l~~~g~~v~~~~~   37 (266)
                      |++||++|+.| |.     +++++|.++|++|..+++
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~   36 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGT   36 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEe
Confidence            45666665444 54     689999999999987763

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=88.43  E-value=1.9  Score=27.23  Aligned_cols=33  Identities=15%  Similarity=0.166  Sum_probs=25.7

Q ss_pred             CCcEEEEecCCCchH-HHHHHHHHHcCCeEEEEec
Q 024517            4 QAKRVLLTSDGDEIS-KNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         4 ~~k~vlItGa~~giG-~~ia~~l~~~g~~v~~~~~   37 (266)
                      ..|++.+.|-++ +| .++|+.|.++|+.|...|.
T Consensus         7 ~~~~ihfiGigG-~GMs~LA~~L~~~G~~VsGSD~   40 (96)
T d1p3da1           7 RVQQIHFIGIGG-AGMSGIAEILLNEGYQISGSDI   40 (96)
T ss_dssp             TCCEEEEETTTS-TTHHHHHHHHHHHTCEEEEEES
T ss_pred             hCCEEEEEEECH-HHHHHHHHHHHhCCCEEEEEeC
Confidence            456677777654 56 6679999999999999983

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=88.15  E-value=0.25  Score=36.75  Aligned_cols=33  Identities=18%  Similarity=0.372  Sum_probs=29.4

Q ss_pred             CcEEEEecCCCchHHH-----HHHHHHHcCCeEEEEe-c
Q 024517            5 AKRVLLTSDGDEISKN-----IAFHLAKRGCRLVLVG-N   37 (266)
Q Consensus         5 ~k~vlItGa~~giG~~-----ia~~l~~~g~~v~~~~-~   37 (266)
                      +|++.|+|+-||+|+.     +|..|+++|.+|.++| +
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            6899999999999985     6788889999999998 5

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=88.08  E-value=1.2  Score=34.22  Aligned_cols=78  Identities=10%  Similarity=0.040  Sum_probs=48.0

Q ss_pred             cEEEEecCCCc-hHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            6 KRVLLTSDGDE-ISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         6 k~vlItGa~~g-iG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      ++++-.|+++| |+.+++ +  ...++|+.++ +++.++-..+.+.. ++-..++.+...|+.+..           ...
T Consensus       112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~-~~~~~~~~i~~~~~~~~~-----------~~~  176 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAER-HGVSDRFFVRKGEFLEPF-----------KEK  176 (271)
T ss_dssp             CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHH-TTCTTSEEEEESSTTGGG-----------GGG
T ss_pred             cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHH-cCCCceeEEeeccccccc-----------ccc
Confidence            45665666655 444433 3  3467899999 77766655555543 222245677777776543           112


Q ss_pred             hCCCCEEEEcCCCCC
Q 024517           84 LGNLDAFVHCYTYEG   98 (266)
Q Consensus        84 ~g~id~li~~ag~~~   98 (266)
                      ++++|++|.|-.+..
T Consensus       177 ~~~fDlIVsNPPYI~  191 (271)
T d1nv8a_         177 FASIEMILSNPPYVK  191 (271)
T ss_dssp             TTTCCEEEECCCCBC
T ss_pred             cCcccEEEEcccccC
Confidence            368999999987753

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=87.28  E-value=0.17  Score=35.98  Aligned_cols=86  Identities=15%  Similarity=0.144  Sum_probs=51.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHc-CCeEEEE-eccccc--HHHHHHHh----------cccCC-CCCeEEEEEecCCCch
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKR-GCRLVLV-GNERRL--SSVAEKMM----------GSLKG-GQPVEVVGLDMEEDRE   70 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~-g~~v~~~-~~~~~~--~~~~~~~~----------~~~~~-~~~~~~~~~D~~~~~~   70 (266)
                      =++.|.|++|.+|+++++...+. ++.++.. +++...  .+-..++.          ..... ..... +..|++.++ 
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D-ViIDFs~p~-   82 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPE-   82 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHH-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc-eEEEeccHH-
Confidence            36899999999999999999886 5565533 232110  00000000          00000 01222 457999999 


Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEcCCC
Q 024517           71 GAFDEAVDKACQILGNLDAFVHCYTY   96 (266)
Q Consensus        71 ~~v~~~~~~~~~~~g~id~li~~ag~   96 (266)
                       .+...++.+.+.  ++-+++-..|+
T Consensus        83 -~~~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          83 -GTLNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             -HHHHHHHHHHHT--TCEEEECCCCC
T ss_pred             -HHHHHHHHHHhc--cceeEEecCCC
Confidence             888888776654  57777777765

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.12  E-value=1.1  Score=33.10  Aligned_cols=79  Identities=13%  Similarity=-0.011  Sum_probs=52.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .|.+||-.|+++|--.++..++.....+|+.++ +++..+...+.+... . -.++.++..|..+..       .     
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~-~-~~n~~~~~~d~~~~~-------~-----  140 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL-G-IENVIFVCGDGYYGV-------P-----  140 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT-T-CCSEEEEESCGGGCC-------G-----
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhh-c-ccccccccCchHHcc-------c-----
Confidence            477899999998876666555665566899998 666666555555433 1 246777766665432       1     


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                      ..+.+|.++.+++.
T Consensus       141 ~~~~fD~I~~~~~~  154 (213)
T d1dl5a1         141 EFSPYDVIFVTVGV  154 (213)
T ss_dssp             GGCCEEEEEECSBB
T ss_pred             cccchhhhhhhccH
Confidence            12578999988765

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=87.09  E-value=0.65  Score=32.35  Aligned_cols=86  Identities=16%  Similarity=0.041  Sum_probs=49.6

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccC---CCCCeEEEEEecCCCchHHHHHHHHHHHHHh
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLK---GGQPVEVVGLDMEEDREGAFDEAVDKACQIL   84 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~   84 (266)
                      +-+.|- |.+|..+|++|++.|+.++..++.++.++..+.......   .-.+...+...+.+.+  ++....+.+....
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~v~~~~~~l~~~~   79 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTR--EVYEVAEALYPYL   79 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHH--HHHHHHHHHTTTC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEEEEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchh--hhhhhhccccccc
Confidence            455666 669999999999998876544355555555554421110   0112333334455555  6777777666554


Q ss_pred             CCCCEEEEcCCC
Q 024517           85 GNLDAFVHCYTY   96 (266)
Q Consensus        85 g~id~li~~ag~   96 (266)
                      .+-..+|.+...
T Consensus        80 ~~~~~iid~sT~   91 (156)
T d2cvza2          80 REGTYWVDATSG   91 (156)
T ss_dssp             CTTEEEEECSCC
T ss_pred             cccccccccccC
Confidence            445566666543

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.78  E-value=0.25  Score=36.53  Aligned_cols=29  Identities=14%  Similarity=0.186  Sum_probs=24.9

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      |+|.||+= -|..+|.+|+++|.+|.++.+
T Consensus         8 viViGaG~-~Gl~~A~~La~~G~~V~vlE~   36 (297)
T d2bcgg1           8 VIVLGTGI-TECILSGLLSVDGKKVLHIDK   36 (297)
T ss_dssp             EEEECCSH-HHHHHHHHHHHTTCCEEEECS
T ss_pred             EEEECcCH-HHHHHHHHHHHCCCCEEEEcC
Confidence            67777655 599999999999999999983

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.67  E-value=0.29  Score=38.08  Aligned_cols=32  Identities=19%  Similarity=0.266  Sum_probs=27.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      +.++|+|.||+= -|..+|.+|.++|++|.++-
T Consensus         4 ~~~kViVIGaG~-aGL~aA~~L~~~G~~V~VlE   35 (449)
T d2dw4a2           4 KTGKVIIIGSGV-SGLAAARQLQSFGMDVTLLE   35 (449)
T ss_dssp             CCCEEEEECCBH-HHHHHHHHHHHTTCEEEEEC
T ss_pred             CCCcEEEECCCH-HHHHHHHHHHhCCCCEEEEe
Confidence            456699999886 49999999999999999986

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=86.56  E-value=0.28  Score=37.59  Aligned_cols=29  Identities=28%  Similarity=0.581  Sum_probs=25.5

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      |+|.||+- .|.++|.+|+++|.+|+++++
T Consensus         6 vvIIGaGi-~Gls~A~~La~~G~~V~viE~   34 (281)
T d2gf3a1           6 VIVVGAGS-MGMAAGYQLAKQGVKTLLVDA   34 (281)
T ss_dssp             EEEECCSH-HHHHHHHHHHHTTCCEEEECS
T ss_pred             EEEECcCH-HHHHHHHHHHHCCCcEEEEeC
Confidence            67887765 799999999999999999983

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=86.19  E-value=0.33  Score=32.85  Aligned_cols=76  Identities=16%  Similarity=0.154  Sum_probs=48.7

Q ss_pred             CCcEEEEecCCC----------chHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHH
Q 024517            4 QAKRVLLTSDGD----------EISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGA   72 (266)
Q Consensus         4 ~~k~vlItGa~~----------giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   72 (266)
                      .-|++||.|++.          --+.+.+++|.++|++++++. |++... +...+        --+.|--.++ .+  .
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVs-td~d~--------aD~lYfePlt-~e--~   73 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIM-TDPEM--------ADATYIEPIH-WE--V   73 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGG-GCGGG--------SSEEECSCCC-HH--H
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhh-cChhh--------cceeeeecCC-HH--H
Confidence            457899999852          346778899999999999998 665432 11111        1122222333 44  5


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCC
Q 024517           73 FDEAVDKACQILGNLDAFVHCYTY   96 (266)
Q Consensus        73 v~~~~~~~~~~~g~id~li~~ag~   96 (266)
                      +.++++.     .++|.++...|.
T Consensus        74 v~~Ii~~-----E~pd~il~~~GG   92 (127)
T d1a9xa3          74 VRKIIEK-----ERPDAVLPTMGG   92 (127)
T ss_dssp             HHHHHHH-----HCCSEEECSSSH
T ss_pred             HHHHHHH-----hCcCCeEEEeee
Confidence            6666654     489999988775

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.82  E-value=0.36  Score=35.76  Aligned_cols=33  Identities=18%  Similarity=0.321  Sum_probs=28.5

Q ss_pred             cEEEEecCCCchHHH-----HHHHHHHcCCeEEEEe-cc
Q 024517            6 KRVLLTSDGDEISKN-----IAFHLAKRGCRLVLVG-NE   38 (266)
Q Consensus         6 k~vlItGa~~giG~~-----ia~~l~~~g~~v~~~~-~~   38 (266)
                      |++.|+++-||+|+.     +|..|+++|.+|.++| +.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            689999999999985     5778889999999998 54

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.23  E-value=1.3  Score=31.11  Aligned_cols=35  Identities=17%  Similarity=0.364  Sum_probs=32.9

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      +++|+++++.|..+.+-.+++..+...|+++.+++
T Consensus         1 sl~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~   35 (163)
T d1pvva2           1 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVAT   35 (163)
T ss_dssp             CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEec
Confidence            57899999999999999999999999999999987

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=85.12  E-value=1.6  Score=31.38  Aligned_cols=75  Identities=16%  Similarity=0.199  Sum_probs=50.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++.+||=.|++.|  . .+..|+++|++|+.++ ++..++...+.....  +-.++.+...|+.+..       .+    
T Consensus        30 ~~grvLDiGcG~G--~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~--~~~~~~~~~~d~~~~~-------~~----   93 (198)
T d2i6ga1          30 APGRTLDLGCGNG--R-NSLYLAANGYDVTAWDKNPASMANLERIKAAE--GLDNLQTDLVDLNTLT-------FD----   93 (198)
T ss_dssp             CSCEEEEETCTTS--H-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCTTEEEEECCTTTCC-------CC----
T ss_pred             CCCcEEEECCCCC--H-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhc--cccchhhhheeccccc-------cc----
Confidence            4567899998755  3 5678899999999999 666666555444432  1135677777877654       11    


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                        +.+|+++.+.-+
T Consensus        94 --~~fD~I~~~~~~  105 (198)
T d2i6ga1          94 --GEYDFILSTVVM  105 (198)
T ss_dssp             --CCEEEEEEESCG
T ss_pred             --ccccEEEEeeee
Confidence              468999876544

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.80  E-value=1.7  Score=32.10  Aligned_cols=77  Identities=9%  Similarity=0.011  Sum_probs=53.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHH-HHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSS-VAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .+.+||..|+++|--.++..++.  |.+|+.+...+.+.+ ..+.+.+ .+ -.++.++..|..+-.       .     
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~-~g-~~nv~~~~gd~~~g~-------~-----  141 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLER-AG-VKNVHVILGDGSKGF-------P-----  141 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHH-TT-CCSEEEEESCGGGCC-------G-----
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHH-cC-CceeEEEECccccCC-------c-----
Confidence            57789999999988888877776  467888884444444 3344433 22 268899998887632       0     


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                      ..+++|.++.+++.
T Consensus       142 ~~~pfD~Iiv~~a~  155 (215)
T d1jg1a_         142 PKAPYDVIIVTAGA  155 (215)
T ss_dssp             GGCCEEEEEECSBB
T ss_pred             ccCcceeEEeeccc
Confidence            12689999988876

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.73  E-value=0.64  Score=35.01  Aligned_cols=34  Identities=15%  Similarity=0.261  Sum_probs=29.0

Q ss_pred             CCCCcEEEEecCCCchHHHHHHHHHH-cCCeEEEEe
Q 024517            2 ENQAKRVLLTSDGDEISKNIAFHLAK-RGCRLVLVG   36 (266)
Q Consensus         2 ~l~~k~vlItGa~~giG~~ia~~l~~-~g~~v~~~~   36 (266)
                      ++++++++|-| .|.+|..+|+.|.+ .|++|+.++
T Consensus        28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            57899999886 77899999999985 599998765

>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional activator sigm54 (NtrC1), N-terminal domain
species: Aquifex aeolicus [TaxId: 63363]

Probab=84.53  E-value=2.4  Score=28.50  Aligned_cols=79  Identities=14%  Similarity=0.080  Sum_probs=53.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      ++||.--...+...+...|-..|+.|..+.+.   ++..+.+.+     .....+.+|+.-++.+.+ .++.++++....
T Consensus         2 kILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~---~eAl~~l~~-----~~~dlvilD~~mp~~~G~-e~~~~lr~~~~~   72 (137)
T d1ny5a1           2 NVLVIEDDKVFRGLLEEYLSMKGIKVESAERG---KEAYKLLSE-----KHFNVVLLDLLLPDVNGL-EILKWIKERSPE   72 (137)
T ss_dssp             EEEEECCCHHHHHHHHHHHHHHTCEEEEESSH---HHHHHHHHH-----SCCSEEEEESBCSSSBHH-HHHHHHHHHCTT
T ss_pred             EEEEEecCHHHHHHHHHHHHHCCCEEEEECCH---HHHHHHhhc-----cccccchHHHhhhhhhHH-HHHHHHHHhCCC
Confidence            47777788888889999999999999877643   333334433     245566677765554343 677778877767


Q ss_pred             CCEEEEcC
Q 024517           87 LDAFVHCY   94 (266)
Q Consensus        87 id~li~~a   94 (266)
                      +-+++..+
T Consensus        73 ~piI~lT~   80 (137)
T d1ny5a1          73 TEVIVITG   80 (137)
T ss_dssp             SEEEEEEE
T ss_pred             CCEEEEEC
Confidence            77776654

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.51  E-value=0.65  Score=32.41  Aligned_cols=32  Identities=22%  Similarity=0.277  Sum_probs=24.5

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCe-EEEEec
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGCR-LVLVGN   37 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~~-v~~~~~   37 (266)
                      +++|+|.||+ .+|..+|..+.++|++ |+++.+
T Consensus        45 ~~kVvVIGGG-dtA~D~A~~a~r~GA~~V~vi~r   77 (153)
T d1gtea3          45 RGAVIVLGAG-DTAFDCATSALRCGARRVFLVFR   77 (153)
T ss_dssp             CSEEEEECSS-HHHHHHHHHHHHTTCSEEEEECS
T ss_pred             CCEEEEECCC-hhHHHHHHHHHHcCCcceeEEEe
Confidence            4567777665 4899999999999985 666653

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=84.38  E-value=0.4  Score=37.20  Aligned_cols=29  Identities=24%  Similarity=0.512  Sum_probs=25.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-eEEEEe
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGC-RLVLVG   36 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~-~v~~~~   36 (266)
                      .|+|.||+- +|.++|.+|+++|. +|.+++
T Consensus         3 dViIIGaGi-~G~s~A~~La~~G~~~V~liE   32 (305)
T d1pj5a2           3 RIVIIGAGI-VGTNLADELVTRGWNNITVLD   32 (305)
T ss_dssp             CEEEECCSH-HHHHHHHHHHHTTCCCEEEEC
T ss_pred             CEEEECcCH-HHHHHHHHHHHcCCCcEEEEe
Confidence            478888875 89999999999997 699987

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=84.36  E-value=0.25  Score=32.25  Aligned_cols=33  Identities=12%  Similarity=0.160  Sum_probs=28.7

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      ..||+|+|.|++. -|..+|..|++.+.++++..
T Consensus        30 f~gK~VlVVG~g~-Sa~dia~~l~~~ak~v~~~~   62 (107)
T d2gv8a2          30 FVGESVLVVGGAS-SANDLVRHLTPVAKHPIYQS   62 (107)
T ss_dssp             GTTCCEEEECSSH-HHHHHHHHHTTTSCSSEEEE
T ss_pred             cCCCeEEEECCCC-CHHHHHHHHHHhcCEEEEEE
Confidence            5799999999985 69999999999988887776

>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoP receiver domain
species: Bacillus subtilis [TaxId: 1423]

Probab=83.51  E-value=3.3  Score=27.02  Aligned_cols=80  Identities=14%  Similarity=0.216  Sum_probs=53.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      |++||.=-..-+-..+...|-+.|+.|..+.+.+   +..+.+++.     ....+.+|+.-++.+.. .++.++++...
T Consensus         3 krILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~~---~al~~l~~~-----~~dlillD~~mp~~~G~-~~~~~~r~~~~   73 (121)
T d1mvoa_           3 KKILVVDDEESIVTLLQYNLERSGYDVITASDGE---EALKKAETE-----KPDLIVLDVMLPKLDGI-EVCKQLRQQKL   73 (121)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHH---HHHHHHHHH-----CCSEEEEESSCSSSCHH-HHHHHHHHTTC
T ss_pred             CCEEEEECCHHHHHHHHHHHHHCCCEEEEECCHH---HHHHHHhcc-----cccEEEecccccCCCCc-hhhhhhhccCC
Confidence            6899999999999999999999999999876433   333333332     34455567765553344 45666776655


Q ss_pred             CCCEEEEcC
Q 024517           86 NLDAFVHCY   94 (266)
Q Consensus        86 ~id~li~~a   94 (266)
                      .+-+++..+
T Consensus        74 ~~~ii~lt~   82 (121)
T d1mvoa_          74 MFPILMLTA   82 (121)
T ss_dssp             CCCEEEEEC
T ss_pred             CCEEEEEEe
Confidence            566666554

>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein PrrA, N-terminal domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=83.21  E-value=4.2  Score=26.54  Aligned_cols=80  Identities=13%  Similarity=0.120  Sum_probs=54.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhC
Q 024517            6 KRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILG   85 (266)
Q Consensus         6 k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g   85 (266)
                      .++||.=-...+...+...|.+.|+.|..+.+.+   +..+.+++.     +...+.+|+.-++.+. -.++.++++...
T Consensus         2 PkILiVDD~~~~~~~l~~~L~~~g~~v~~a~~~~---eal~~~~~~-----~~dlvl~D~~mP~~~G-~el~~~ir~~~~   72 (121)
T d1ys7a2           2 PRVLVVDDDSDVLASLERGLRLSGFEVATAVDGA---EALRSATEN-----RPDAIVLDINMPVLDG-VSVVTALRAMDN   72 (121)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHH---HHHHHHHHS-----CCSEEEEESSCSSSCH-HHHHHHHHHTTC
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHH---HHHHHHHhC-----CCCEEEEEeeccCccc-HHHHHHHHhcCC
Confidence            3688888888899999999999999998776433   333344332     4456667776554324 356677777666


Q ss_pred             CCCEEEEcC
Q 024517           86 NLDAFVHCY   94 (266)
Q Consensus        86 ~id~li~~a   94 (266)
                      .+-+++..+
T Consensus        73 ~~piI~lt~   81 (121)
T d1ys7a2          73 DVPVCVLSA   81 (121)
T ss_dssp             CCCEEEEEC
T ss_pred             CCEEEEEEe
Confidence            677776664

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=83.16  E-value=0.34  Score=36.92  Aligned_cols=29  Identities=31%  Similarity=0.420  Sum_probs=25.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      .|+|.||+- -|...|.+|+++|++|.++.
T Consensus         2 ~V~IIGaG~-aGL~aA~~L~~~G~~V~vlE   30 (347)
T d2ivda1           2 NVAVVGGGI-SGLAVAHHLRSRGTDAVLLE   30 (347)
T ss_dssp             CEEEECCBH-HHHHHHHHHHTTTCCEEEEC
T ss_pred             eEEEECCCH-HHHHHHHHHHhCCCCEEEEe
Confidence            378898865 59999999999999999997

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.00  E-value=2.1  Score=33.64  Aligned_cols=75  Identities=16%  Similarity=0.240  Sum_probs=49.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++++||-.|++.|+   ++..++++|+ +|+.++..+..+ .+++.........++.++..|+.+.+       +.    
T Consensus        38 ~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~~~~-~a~~~~~~~~~~~~i~~i~~~~~~l~-------~~----  102 (328)
T d1g6q1_          38 KDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSSIIE-MAKELVELNGFSDKITLLRGKLEDVH-------LP----  102 (328)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESSTHHH-HHHHHHHHTTCTTTEEEEESCTTTSC-------CS----
T ss_pred             CcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCHHHH-HHHHHHHHhCccccceEEEeehhhcc-------Cc----
Confidence            68999999999874   5667788898 688887434333 33333333333467889998888765       10    


Q ss_pred             HhCCCCEEEEcC
Q 024517           83 ILGNLDAFVHCY   94 (266)
Q Consensus        83 ~~g~id~li~~a   94 (266)
                       -.++|+++...
T Consensus       103 -~~~~D~i~se~  113 (328)
T d1g6q1_         103 -FPKVDIIISEW  113 (328)
T ss_dssp             -SSCEEEEEECC
T ss_pred             -ccceeEEEEEe
Confidence             14689998864

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=82.86  E-value=1.8  Score=32.09  Aligned_cols=75  Identities=16%  Similarity=0.054  Sum_probs=48.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQI   83 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~   83 (266)
                      .+.+||-.|.++|--.+   .|++.+.+|+.++..+.+.+.+++....   ..++.++..|..+--       .     .
T Consensus        70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~~---~~nv~~~~~d~~~g~-------~-----~  131 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLSY---YNNIKLILGDGTLGY-------E-----E  131 (224)
T ss_dssp             TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHTT---CSSEEEEESCGGGCC-------G-----G
T ss_pred             ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHhc---ccccccccCchhhcc-------h-----h
Confidence            57789999999875433   4566677899988444444444333222   358888888876522       0     1


Q ss_pred             hCCCCEEEEcCCC
Q 024517           84 LGNLDAFVHCYTY   96 (266)
Q Consensus        84 ~g~id~li~~ag~   96 (266)
                      .+++|.++.+++.
T Consensus       132 ~~pfD~Iiv~~a~  144 (224)
T d1vbfa_         132 EKPYDRVVVWATA  144 (224)
T ss_dssp             GCCEEEEEESSBB
T ss_pred             hhhHHHHHhhcch
Confidence            2578999988765

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=82.85  E-value=0.96  Score=30.98  Aligned_cols=85  Identities=15%  Similarity=0.172  Sum_probs=52.1

Q ss_pred             CCcEEEEecCC---CchHHHHHHHHHHcCCeEEEEe-cccccHH--HHHHHhcccCCCCCeEEEEEecCCCchHHHHHHH
Q 024517            4 QAKRVLLTSDG---DEISKNIAFHLAKRGCRLVLVG-NERRLSS--VAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAV   77 (266)
Q Consensus         4 ~~k~vlItGa~---~giG~~ia~~l~~~g~~v~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~   77 (266)
                      +.|.+.|.|+|   +..|..+.+.|.++|++|+.+. +.+...-  ....+.+. +  ..+..+.. +..++  .+..++
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dl-p--~~iD~v~i-~vp~~--~~~~~~   91 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDI-P--DKIEVVDL-FVKPK--LTMEYV   91 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGC-S--SCCSEEEE-CSCHH--HHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCccccccccc-C--ccceEEEE-EeCHH--HHHHHH
Confidence            46899999999   6799999999999999999887 4322211  00111111 1  12222211 23344  677777


Q ss_pred             HHHHHHhCCCCEEEEcCCC
Q 024517           78 DKACQILGNLDAFVHCYTY   96 (266)
Q Consensus        78 ~~~~~~~g~id~li~~ag~   96 (266)
                      +++.+.  ++..++...|.
T Consensus        92 ~e~~~~--g~k~v~~~~G~  108 (139)
T d2d59a1          92 EQAIKK--GAKVVWFQYNT  108 (139)
T ss_dssp             HHHHHH--TCSEEEECTTC
T ss_pred             HHHHHh--CCCEEEEeccc
Confidence            777665  46677777665

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=82.85  E-value=1.2  Score=29.24  Aligned_cols=32  Identities=22%  Similarity=0.139  Sum_probs=24.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHc---CCeEEEEec
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKR---GCRLVLVGN   37 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~---g~~v~~~~~   37 (266)
                      .++++|.|| |.+|..+|..|.+.   |.+|.++.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~   54 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYR   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEec
Confidence            578889988 56999999766654   456888873

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=82.72  E-value=0.71  Score=34.45  Aligned_cols=29  Identities=21%  Similarity=0.344  Sum_probs=25.5

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            8 VLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         8 vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      |+|.||+- .|..+|..|+++|.+|+++.+
T Consensus         5 ViIIGaG~-aGl~aA~~la~~G~~V~liEk   33 (251)
T d2i0za1           5 VIVIGGGP-SGLMAAIGAAEEGANVLLLDK   33 (251)
T ss_dssp             EEEECCSH-HHHHHHHHHHHTTCCEEEECS
T ss_pred             EEEECcCH-HHHHHHHHHHHCCCcEEEEeC
Confidence            67888775 699999999999999999983

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=82.64  E-value=2.2  Score=29.77  Aligned_cols=73  Identities=11%  Similarity=0.087  Sum_probs=39.1

Q ss_pred             EEEEecCCCchHHHHHHHHH-Hc-----CCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHH
Q 024517            7 RVLLTSDGDEISKNIAFHLA-KR-----GCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDK   79 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~-~~-----g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~   79 (266)
                      ++.|.||++ +|..++.... +.     ..++++.| ++++.+...+.......  .....   ..+...    .+.+  
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~--~~~~~---~~t~~~----~~~l--   69 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVK--DRFKV---LISDTF----EGAV--   69 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHT--TSSEE---EECSSH----HHHH--
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhc--cCceE---EEecCc----cccc--
Confidence            377888865 6666554333 21     24799999 77766544433332221  12222   222222    1122  


Q ss_pred             HHHHhCCCCEEEEcCCC
Q 024517           80 ACQILGNLDAFVHCYTY   96 (266)
Q Consensus        80 ~~~~~g~id~li~~ag~   96 (266)
                           ..-|++|..+|.
T Consensus        70 -----~~aDvVVita~~   81 (162)
T d1up7a1          70 -----VDAKYVIFQFRP   81 (162)
T ss_dssp             -----TTCSEEEECCCT
T ss_pred             -----CCCCEEEEeccc
Confidence                 367999999986

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.61  E-value=2  Score=36.29  Aligned_cols=33  Identities=15%  Similarity=0.222  Sum_probs=28.1

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG   36 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~   36 (266)
                      |++.+|+|.|+ +|+|..+++.|+..|. ++.++|
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD   56 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIID   56 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEEC
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEc
Confidence            45678999987 6799999999999998 777876

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=82.35  E-value=0.56  Score=33.18  Aligned_cols=31  Identities=19%  Similarity=0.262  Sum_probs=24.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEE
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLV   35 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~   35 (266)
                      .+++|+|.||+- +|..+|..|.+.|.+|.++
T Consensus         2 ~~~~VvIIGgG~-~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           2 ANDNVVIVGTGL-AGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             CSCEEEEECCSH-HHHHHHHHHHHTTCCSEEE
T ss_pred             CCCCEEEECCcH-HHHHHHHHHHHcCCceEEE
Confidence            467888888765 8999999999999865443

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=82.10  E-value=3.3  Score=28.33  Aligned_cols=78  Identities=22%  Similarity=0.313  Sum_probs=48.3

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHH
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKRGC-RLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKA   80 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~g~-~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~   80 (266)
                      ++|++||=.|+++|   .+..+.+.+|+ +|+.++ +++..+...+.++.. ....++.++..|..+        .++  
T Consensus        13 ~~g~~vlDl~~GtG---~~~iea~~rga~~v~~ve~~~~a~~~~~~n~~~~-~~~~~~~ii~~D~~~--------~l~--   78 (152)
T d2esra1          13 FNGGRVLDLFAGSG---GLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMT-KAENRFTLLKMEAER--------AID--   78 (152)
T ss_dssp             CCSCEEEEETCTTC---HHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTT-TCGGGEEEECSCHHH--------HHH--
T ss_pred             CCCCeEEEcCCccC---HHHHHHHHhCcceeeeehhchhhhhhhhhhhhhc-ccccchhhhcccccc--------ccc--
Confidence            47888887777766   23445677887 788888 666655555555433 222457777765432        222  


Q ss_pred             HHHhCCCCEEEEcCC
Q 024517           81 CQILGNLDAFVHCYT   95 (266)
Q Consensus        81 ~~~~g~id~li~~ag   95 (266)
                       ...++.|+++....
T Consensus        79 -~~~~~fDiIf~DPP   92 (152)
T d2esra1          79 -CLTGRFDLVFLDPP   92 (152)
T ss_dssp             -HBCSCEEEEEECCS
T ss_pred             -ccccccceeEechh
Confidence             22357899988753

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=81.99  E-value=0.98  Score=34.06  Aligned_cols=33  Identities=15%  Similarity=0.225  Sum_probs=28.1

Q ss_pred             CCCcEEEEecCCCchHHHHHHHHHHc-CCeEEEEe
Q 024517            3 NQAKRVLLTSDGDEISKNIAFHLAKR-GCRLVLVG   36 (266)
Q Consensus         3 l~~k~vlItGa~~giG~~ia~~l~~~-g~~v~~~~   36 (266)
                      ++||+++|-|- |.+|..+|+.|.++ |++|+.++
T Consensus        30 l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          30 LKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence            78999999987 55999999999865 99988765

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=81.81  E-value=1.3  Score=29.25  Aligned_cols=31  Identities=16%  Similarity=0.294  Sum_probs=27.9

Q ss_pred             cEEEEecCC---CchHHHHHHHHHHcCCeEEEEe
Q 024517            6 KRVLLTSDG---DEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         6 k~vlItGa~---~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      |.+.|.|+|   +..|..+.+.|.++|++|+.+.
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVn   35 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVN   35 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEc
Confidence            789999999   5589999999999999988876

>d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoP receiver domain
species: Escherichia coli [TaxId: 562]

Probab=81.48  E-value=5  Score=26.02  Aligned_cols=79  Identities=11%  Similarity=0.122  Sum_probs=53.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHHHhCC
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGNERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGN   86 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~~~g~   86 (266)
                      ++||.--...+...+...|.+.|+.|..+.+.+   +..+.+.+.     ....+.+|+.-++.+.+ .+++++++....
T Consensus         2 rILvVDDd~~~~~~l~~~L~~~G~~v~~a~~g~---eal~~l~~~-----~~dliilD~~mP~~~G~-e~~~~i~~~~~~   72 (119)
T d2pl1a1           2 RVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAK---EADYYLNEH-----IPDIAIVDLGLPDEDGL-SLIRRWRSNDVS   72 (119)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHTTCEEEEESSHH---HHHHHHHHS-----CCSEEEECSCCSSSCHH-HHHHHHHHTTCC
T ss_pred             EEEEEeCCHHHHHHHHHHHHHCCCEEEEECCHH---HHHHHHHhc-----ccceeehhccCCCchhH-HHHHHHHhcCcc
Confidence            477888888888999999999999998776433   333334332     44566677775553344 467778776666


Q ss_pred             CCEEEEcC
Q 024517           87 LDAFVHCY   94 (266)
Q Consensus        87 id~li~~a   94 (266)
                      +-+++..+
T Consensus        73 ~pvi~lt~   80 (119)
T d2pl1a1          73 LPILVLTA   80 (119)
T ss_dssp             SCEEEEES
T ss_pred             cceEeeec
Confidence            66666654

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.44  E-value=0.52  Score=36.14  Aligned_cols=30  Identities=20%  Similarity=0.221  Sum_probs=26.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 024517            7 RVLLTSDGDEISKNIAFHLAKRGCRLVLVGN   37 (266)
Q Consensus         7 ~vlItGa~~giG~~ia~~l~~~g~~v~~~~~   37 (266)
                      .|+|.||+- .|..+|..|.++|.+|+++.+
T Consensus         4 ~V~IvGaGp-~Gl~~A~~L~~~G~~v~vlE~   33 (292)
T d1k0ia1           4 QVAIIGAGP-SGLLLGQLLHKAGIDNVILER   33 (292)
T ss_dssp             SEEEECCSH-HHHHHHHHHHHHTCCEEEECS
T ss_pred             CEEEECcCH-HHHHHHHHHHHCCCCEEEEeC
Confidence            578888884 799999999999999999983

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.30  E-value=0.37  Score=34.82  Aligned_cols=35  Identities=17%  Similarity=0.295  Sum_probs=30.0

Q ss_pred             CCCCCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 024517            1 MENQAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG   36 (266)
Q Consensus         1 m~l~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~   36 (266)
                      |.-..+.|+|.||+. .|...|..+++.|.+|++++
T Consensus         1 m~~~~~~VvIIGgGp-aGl~aA~~~ar~g~~v~vie   35 (192)
T d1vdca1           1 LETHNTRLCIVGSGP-AAHTAAIYAARAELKPLLFE   35 (192)
T ss_dssp             CEEEEEEEEEECCSH-HHHHHHHHHHHTTCCCEEEC
T ss_pred             CCcccceEEEECCCH-HHHHHHHHHHHcCCcEEEEE
Confidence            444567899999886 79999999999999999987

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=81.26  E-value=0.82  Score=31.85  Aligned_cols=26  Identities=8%  Similarity=0.061  Sum_probs=23.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCC
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRGC   30 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g~   30 (266)
                      |-+|.|.||||-+|..+.+.|.+|.+
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCC
Confidence            45799999999999999999999865

>d1vb3a1 c.79.1.1 (A:1-428) Threonine synthase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Escherichia coli [TaxId: 562]

Probab=81.05  E-value=2.9  Score=34.26  Aligned_cols=71  Identities=17%  Similarity=0.204  Sum_probs=47.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcC-CeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHH
Q 024517            5 AKRVLLTSDGDEISKNIAFHLAKRG-CRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKAC   81 (266)
Q Consensus         5 ~k~vlItGa~~giG~~ia~~l~~~g-~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~   81 (266)
                      ++..++...||..|.+.+..+...+ .+++++. ...-......++.. .  +.++..+.+| .+.+  +++++++++.
T Consensus       125 ~~~~Il~ATSGDTG~Aa~~a~~~~~~i~~~vl~P~g~vS~~Q~~Qmtt-~--g~nv~vi~V~-G~fD--Dcq~lvk~~f  197 (428)
T d1vb3a1         125 KPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCT-L--GGNIETVAID-GDFD--ACQALVKQAF  197 (428)
T ss_dssp             CCEEEEEECSSSHHHHHHHHTTTCTTEEEEEEEETTCSCHHHHHHHHS-C--CTTEEEEEEE-SCHH--HHHHHHHHGG
T ss_pred             ccceeeecCCCCcchhHHHHHhCccccceEEEecCCCCcHHHHHHHhh-c--cCCceEEecC-CChh--HHHHHHHHHh
Confidence            4455677777999999999999885 5788776 33322222334433 3  4688888877 4456  7888888765

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=80.69  E-value=0.66  Score=35.31  Aligned_cols=33  Identities=21%  Similarity=0.360  Sum_probs=26.8

Q ss_pred             cEEEEecCCCchHHHH-----HHHHHHcCCeEEEEe-ccc
Q 024517            6 KRVLLTSDGDEISKNI-----AFHLAKRGCRLVLVG-NER   39 (266)
Q Consensus         6 k~vlItGa~~giG~~i-----a~~l~~~g~~v~~~~-~~~   39 (266)
                      |++.|+| =||+|+..     |..|+++|.+|.++| +..
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            5778897 88899864     568999999999999 653

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=80.66  E-value=2.2  Score=31.11  Aligned_cols=76  Identities=20%  Similarity=0.076  Sum_probs=51.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      .+++||=.|++.|.-   +..++++|++|+.++ +++..+...+.+... + ..++.++..|..+..       +.    
T Consensus        15 ~~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~-~-~~~i~~~~~d~~~l~-------~~----   78 (231)
T d1vl5a_          15 GNEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGN-G-HQQVEYVQGDAEQMP-------FT----   78 (231)
T ss_dssp             SCCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHT-T-CCSEEEEECCC-CCC-------SC----
T ss_pred             CcCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccc-c-ccccccccccccccc-------cc----
Confidence            357899999988743   466788899999999 766655544444332 1 257889998888754       11    


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                       .+.+|+++.....
T Consensus        79 -~~~fD~v~~~~~l   91 (231)
T d1vl5a_          79 -DERFHIVTCRIAA   91 (231)
T ss_dssp             -TTCEEEEEEESCG
T ss_pred             -ccccccccccccc
Confidence             1478999887655

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=80.44  E-value=1.5  Score=32.32  Aligned_cols=70  Identities=24%  Similarity=0.242  Sum_probs=44.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHHHHHHHHHHHH
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQ   82 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~v~~~~~~~~~   82 (266)
                      ++++||=.|.+.|.   .+..|++.|++|+.++ +++.++...+    ..    ...++..|..+..       +.    
T Consensus        42 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~l~~a~~----~~----~~~~~~~~~~~l~-------~~----   99 (246)
T d2avna1          42 NPCRVLDLGGGTGK---WSLFLQERGFEVVLVDPSKEMLEVARE----KG----VKNVVEAKAEDLP-------FP----   99 (246)
T ss_dssp             SCCEEEEETCTTCH---HHHHHHTTTCEEEEEESCHHHHHHHHH----HT----CSCEEECCTTSCC-------SC----
T ss_pred             CCCEEEEECCCCch---hcccccccceEEEEeeccccccccccc----cc----ccccccccccccc-------cc----
Confidence            46788888888763   4467788899999999 6554443322    21    1234556665543       11    


Q ss_pred             HhCCCCEEEEcCCC
Q 024517           83 ILGNLDAFVHCYTY   96 (266)
Q Consensus        83 ~~g~id~li~~ag~   96 (266)
                       .+.+|+++....+
T Consensus       100 -~~~fD~ii~~~~~  112 (246)
T d2avna1         100 -SGAFEAVLALGDV  112 (246)
T ss_dssp             -TTCEEEEEECSSH
T ss_pred             -cccccceeeecch
Confidence             1578999887654

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=80.30  E-value=1.6  Score=32.03  Aligned_cols=61  Identities=11%  Similarity=0.132  Sum_probs=43.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCc
Q 024517            4 QAKRVLLTSDGDEISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDR   69 (266)
Q Consensus         4 ~~k~vlItGa~~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   69 (266)
                      .|.+||=.|++.|.-......+...| +|+.++ +++..+.+.+..+..    .++.++..|..++.
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~----~ni~~i~~d~~~~~  117 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRER----NNIIPLLFDASKPW  117 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHC----SSEEEECSCTTCGG
T ss_pred             CCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhcc----CCceEEEeeccCcc
Confidence            47889999999875443333344444 899999 887777776666543    57888888888766

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=80.21  E-value=0.9  Score=30.26  Aligned_cols=76  Identities=12%  Similarity=0.114  Sum_probs=47.8

Q ss_pred             CCcEEEEecCCC----------chHHHHHHHHHHcCCeEEEEe-cccccHHHHHHHhcccCCCCCeEEEEEecCCCchHH
Q 024517            4 QAKRVLLTSDGD----------EISKNIAFHLAKRGCRLVLVG-NERRLSSVAEKMMGSLKGGQPVEVVGLDMEEDREGA   72 (266)
Q Consensus         4 ~~k~vlItGa~~----------giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   72 (266)
                      ..|.+||.|++.          --+.+.+++|.++|++++++. |++... +...+        --+.|.-.++ .+  .
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVs-td~d~--------aD~lYfeplt-~e--~   70 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVS-TDYDT--------SDRLYFEPVT-LE--D   70 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSST-TSTTS--------SSEEECCCCS-HH--H
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhh-cChhh--------cCceEEccCC-HH--H
Confidence            467899999863          346688999999999999998 665432 11111        1122222333 33  4


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCC
Q 024517           73 FDEAVDKACQILGNLDAFVHCYTY   96 (266)
Q Consensus        73 v~~~~~~~~~~~g~id~li~~ag~   96 (266)
                      +.++++.     .++|.++...|.
T Consensus        71 v~~Ii~~-----E~p~~ii~~~GG   89 (121)
T d1a9xa4          71 VLEIVRI-----EKPKGVIVQYGG   89 (121)
T ss_dssp             HHHHHHH-----HCCSEEECSSST
T ss_pred             HHHHHHH-----hCCCEEEeehhh
Confidence            5555543     378999988775