Query         024518
Match_columns 266
No_of_seqs    249 out of 1638
Neff          8.5 
Searched_HMMs 29240
Date          Mon Mar 25 09:39:58 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024518.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024518hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1mvh_A Cryptic LOCI regulator  100.0 1.6E-56 5.4E-61  393.4  18.7  227    3-266    54-298 (299)
  2 3hna_A Histone-lysine N-methyl 100.0 2.9E-57 9.8E-62  395.6  13.4  211    5-264    69-287 (287)
  3 1ml9_A Histone H3 methyltransf 100.0 8.6E-57   3E-61  396.4  13.0  241    2-266    34-302 (302)
  4 2r3a_A Histone-lysine N-methyl 100.0 1.3E-54 4.4E-59  380.9  16.4  220    2-265    66-299 (300)
  5 3bo5_A Histone-lysine N-methyl 100.0 1.1E-53 3.9E-58  373.7  19.7  221    3-265    46-285 (290)
  6 3ope_A Probable histone-lysine 100.0   2E-50   7E-55  341.2  17.1  186   12-265    21-213 (222)
  7 3ooi_A Histone-lysine N-methyl 100.0 1.9E-50 6.5E-55  343.3  14.0  161   57-265    64-231 (232)
  8 3h6l_A Histone-lysine N-methyl 100.0 5.5E-50 1.9E-54  347.7  15.0  163   56-266    89-257 (278)
  9 2w5y_A Histone-lysine N-methyl 100.0 7.4E-43 2.5E-47  287.6   9.6  150   69-265    37-191 (192)
 10 3f9x_A Histone-lysine N-methyl 100.0 1.2E-36 3.9E-41  246.3  10.9  130   74-241    20-156 (166)
 11 2f69_A Histone-lysine N-methyl 100.0 2.2E-32 7.6E-37  235.3  14.7  143   56-240    81-235 (261)
 12 1n3j_A A612L, histone H3 lysin 100.0 1.6E-31 5.5E-36  204.5   7.8  111   83-243     3-113 (119)
 13 2qpw_A PR domain zinc finger p 100.0 5.6E-31 1.9E-35  208.2  10.5  122   73-241    19-147 (149)
 14 1h3i_A Histone H3 lysine 4 spe 100.0 2.3E-29 7.8E-34  221.1  13.3  117   83-240   162-289 (293)
 15 3s8p_A Histone-lysine N-methyl 100.0 3.4E-30 1.1E-34  221.0   5.5  130   84-265   131-268 (273)
 16 3rq4_A Histone-lysine N-methyl  99.9 3.1E-27 1.1E-31  200.6   2.9  122   84-257   103-231 (247)
 17 3ep0_A PR domain zinc finger p  99.9 1.9E-23 6.6E-28  167.9  11.3  120   81-242    24-150 (170)
 18 3db5_A PR domain zinc finger p  99.9 7.3E-23 2.5E-27  162.2   9.9  120   82-242    21-146 (151)
 19 3dal_A PR domain zinc finger p  99.9 1.8E-22 6.3E-27  165.4   7.2  117   82-241    56-179 (196)
 20 3ray_A PR domain-containing pr  99.8 2.3E-19 7.9E-24  150.0   7.2  112   83-241    71-188 (237)
 21 3ihx_A PR domain zinc finger p  99.7 7.7E-18 2.6E-22  133.1   4.3  117   84-241    23-144 (152)
 22 3n71_A Histone lysine methyltr  99.0 4.9E-11 1.7E-15  111.3   0.8   50  189-240   201-257 (490)
 23 3qwp_A SET and MYND domain-con  99.0 2.5E-10 8.5E-15  104.9   4.0   45  188-240   201-245 (429)
 24 3qww_A SET and MYND domain-con  98.9 2.6E-10 8.8E-15  104.9   1.0   60  189-256   202-264 (433)
 25 3qxy_A N-lysine methyltransfer  97.5 8.5E-05 2.9E-09   68.3   4.7   41  189-237   223-263 (449)
 26 2h21_A Ribulose-1,5 bisphospha  97.1 0.00026 8.9E-09   64.8   3.6   51  188-238   189-242 (440)
 27 3smt_A Histone-lysine N-methyl  96.9 0.00049 1.7E-08   64.0   3.7   33   85-117    94-126 (497)
 28 3qww_A SET and MYND domain-con  91.3    0.17 5.9E-06   45.9   4.4   33   84-116     7-39  (433)
 29 3n71_A Histone lysine methyltr  90.2    0.28 9.7E-06   45.2   4.9   35   83-117     6-40  (490)
 30 3qwp_A SET and MYND domain-con  90.0    0.29   1E-05   44.3   4.7   35   83-117     4-38  (429)
 31 3smt_A Histone-lysine N-methyl  83.7    0.98 3.3E-05   41.7   4.5   42  189-237   273-314 (497)
 32 1rju_V Metallothionein; Cu(I)-  76.4     1.2 4.2E-05   24.2   1.5   19   13-31     17-35  (36)
 33 1wvo_A Sialic acid synthase; a  74.0     1.4 4.7E-05   30.0   1.6   19  216-234     6-24  (79)
 34 3qxy_A N-lysine methyltransfer  72.9     2.4 8.1E-05   38.5   3.5   33   85-117    39-72  (449)
 35 1aqs_A Cu-MT, Cu-metallothione  59.1     5.9  0.0002   23.3   2.0   24   12-35     20-43  (53)
 36 2h21_A Ribulose-1,5 bisphospha  57.2     4.9 0.00017   36.2   2.3   25   93-117    31-55  (440)
 37 2lua_A Protein MALE-specific l  50.0      14 0.00049   22.6   2.8   23   13-36      4-34  (52)
 38 3k3s_A Altronate hydrolase; st  44.6      14 0.00046   26.5   2.4   16  219-234    34-49  (105)
 39 1n3j_A A612L, histone H3 lysin  43.9     9.4 0.00032   27.5   1.6   20  216-236    15-34  (119)
 40 3rq4_A Histone-lysine N-methyl  43.5      24 0.00082   29.2   4.2   37  197-233   100-136 (247)
 41 3s8p_A Histone-lysine N-methyl  40.9      35  0.0012   28.7   4.8   37  197-233   128-164 (273)
 42 1kvd_B SMK toxin; halotolerant  40.5      15 0.00051   23.2   1.9   15   95-109     6-20  (77)
 43 3f9x_A Histone-lysine N-methyl  33.7      24 0.00084   26.8   2.6   18  215-232    40-57  (166)
 44 1qjl_A Metallothionein; metal-  32.8      20 0.00069   19.1   1.3   12   62-73      8-19  (28)
 45 3g8r_A Probable spore coat pol  32.4      14 0.00048   32.3   1.1   19  216-234   279-297 (350)
 46 3k3s_A Altronate hydrolase; st  30.8      25 0.00085   25.1   2.0   16   99-114    65-80  (105)
 47 3laz_A D-galactarate dehydrata  28.0      30   0.001   24.4   2.0   19   99-118    58-76  (99)
 48 2wqp_A Polysialic acid capsule  27.9      18 0.00061   31.6   1.0   19  216-234   290-308 (349)
 49 2l61_A EC protein I/II; metall  27.8      32  0.0011   17.8   1.5   17   14-30      6-22  (26)
 50 2w5y_A Histone-lysine N-methyl  26.0      39  0.0013   26.7   2.6   18  215-232    62-79  (192)
 51 1vli_A Spore coat polysacchari  26.0      20 0.00069   31.7   1.0   19  216-234   315-333 (385)
 52 3ooi_A Histone-lysine N-methyl  23.2      46  0.0016   27.0   2.6   17  216-232   103-119 (232)
 53 4gtw_A Ectonucleotide pyrophos  22.6      18 0.00062   35.4   0.0   20   12-32     16-35  (823)
 54 3ope_A Probable histone-lysine  21.6      66  0.0023   25.8   3.2   17   95-111   170-186 (222)
 55 1df6_A Cycloviolacin O1; cycli  21.4      13 0.00044   20.0  -0.7   17   12-28     11-28  (30)

No 1  
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=100.00  E-value=1.6e-56  Score=393.36  Aligned_cols=227  Identities=33%  Similarity=0.694  Sum_probs=170.1

Q ss_pred             cCCCCCCC--CCCCCcccCC--CCCC--CCCcccccccccCCCCCCCcccccCCCeee-eccceEEEcCCCCCCCCCCCC
Q 024518            3 VAKGVKLP--TTAIGCDCRG--NCLN--SHDCSCAKLNSTDSKHYDFPYVHRDGGRLV-EAKAVVFECGPKCGCGPDCIN   75 (266)
Q Consensus         3 ~~~~~~~~--~~~~gC~C~~--~C~~--~~~C~C~~~~~~~~~~~~~~y~~~~~g~l~-~~~~~~~EC~~~C~C~~~C~N   75 (266)
                      +..|+...  .+..||+|.+  +|.+  +.+|+|.++....   ..|+|.  .+|+|. ....++|||++.|+|+..|+|
T Consensus        54 ~~~~~~~~~~~~~~gC~C~~~~~C~~~~~~~C~C~~~~~~~---~~~~y~--~~g~l~~~~~~~i~EC~~~C~C~~~C~N  128 (299)
T 1mvh_A           54 LTQGVIPPDPNFQSGCNCSSLGGCDLNNPSRCECLDDLDEP---THFAYD--AQGRVRADTGAVIYECNSFCSCSMECPN  128 (299)
T ss_dssp             ECTTCCCCCGGGCCCCCCCCSSSSCTTCTTTCSSSTTCCSS---CCCSBC--TTSSBCTTCCSEEECCCTTSCSCTTCTT
T ss_pred             cCCCcCcCCCcCCCCCcCcCCCCcCCCCCCCCccccccccc---cccccC--CCCceeecCCCCeEeCCCCCCCCCCcCC
Confidence            45566633  3569999996  8987  4789999876321   267886  577773 456789999999999999999


Q ss_pred             cccccCCcccEEEEEeCCCceeEEeCCCCCCCCeEEEeeeEEeChhhhhhhcc----CCCceEEecchhhhhccCCCcee
Q 024518           76 RTSQRGLKYRLEVYRTPKKGWAVRSWDFIPAGAPVCEYIGVLRRTEDLDNACD----NENNFIFDIDCLQTMRGLGGRER  151 (266)
Q Consensus        76 r~~q~~~~~~l~v~~t~~kG~Gv~a~~~I~~G~~I~ey~Gevi~~~e~~~~~~----~~~~y~~~l~~~~~~~~~~~~~~  151 (266)
                      |++|+|.+.+|+|++++.+||||||+++|++|+||+||+|||++.+|++++..    ....|+|+++...          
T Consensus       129 r~~q~g~~~~l~v~~t~~~G~Gv~A~~~I~kG~~I~EY~Gevi~~~ea~~R~~~y~~~~~~Y~f~l~~~~----------  198 (299)
T 1mvh_A          129 RVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKNYDDDGITYLFDLDMFD----------  198 (299)
T ss_dssp             CTGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCCEEEEHHHHHHHHTTCCSCSCCCEEEECSSC----------
T ss_pred             ccccccccccEEEEEcCCCcceEeeCceeCCCCEEEEeeeEECcHHHHHHHHHhhhccCceEEEEecCCC----------
Confidence            99999999999999999999999999999999999999999999999886543    2467888774210          


Q ss_pred             ecccccceeecCCCCCCCcccCCCCceEEeCCCCCceeeeeccCCCCCceEEEEEeccCCCCccEEEEEEcCCCCCCCee
Q 024518          152 RLRDVSISTIYNSDRPDDQKVENTPDYCIDAGAVGNVARFINHSCEPNLFVQCVLSSHHDLKLARVVLFAADNIPPLQEL  231 (266)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~IDa~~~Gn~~RfiNHSC~PN~~~~~v~~~~~~~~~~~i~~fA~rdI~~GeEL  231 (266)
                                            ....++|||+.+||+||||||||+||+.++.|+.+..++..++|+|||+|||++||||
T Consensus       199 ----------------------~~~~~~IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~~~~~~~i~~~A~rdI~~GEEL  256 (299)
T 1mvh_A          199 ----------------------DASEYTVDAQNYGDVSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEEL  256 (299)
T ss_dssp             ----------------------SSSCEEEECSSEECGGGGCEECSSCSEEEEEEESCTTCTTSCEEEEEESSCBCTTCBC
T ss_pred             ----------------------CCccEEEeCcccCChhheEeecCCCCeEEEEEEeecCCCCceEEEEEEccCcCCCCEE
Confidence                                  0124899999999999999999999999988888777778899999999999999999


Q ss_pred             EeecCCCCCCCCC-CC------CCccCeeeeeCCCCcccccC
Q 024518          232 TYDYGYELDSVHG-PD------GKVKQMVCYCGAEGCRGRLF  266 (266)
Q Consensus       232 T~dYg~~~~~~~~-~~------~~~~~~~C~Cgs~~Crg~l~  266 (266)
                      ||||++.+|.... .+      .....+.|+|||++|||+||
T Consensus       257 t~dY~~~~~~~~~~~~~~~~~~~~k~~~~C~CGs~~Crg~l~  298 (299)
T 1mvh_A          257 TFDYAGAKDFSPVQSQKSQQNRISKLRRQCKCGSANCRGWLF  298 (299)
T ss_dssp             EECCCTTSSSSCCC----------------------------
T ss_pred             EEEcCCcccccccccccccccccccCCcCcCCCCCCCccccC
Confidence            9999998872110 00      00123699999999999997


No 2  
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=100.00  E-value=2.9e-57  Score=395.65  Aligned_cols=211  Identities=38%  Similarity=0.773  Sum_probs=180.8

Q ss_pred             CCCCCCC---CCCCcccCCCCCCCCCcccccccccCCCCCCCcccccCCCeeee-----ccceEEEcCCCCCCCCCCCCc
Q 024518            5 KGVKLPT---TAIGCDCRGNCLNSHDCSCAKLNSTDSKHYDFPYVHRDGGRLVE-----AKAVVFECGPKCGCGPDCINR   76 (266)
Q Consensus         5 ~~~~~~~---~~~gC~C~~~C~~~~~C~C~~~~~~~~~~~~~~y~~~~~g~l~~-----~~~~~~EC~~~C~C~~~C~Nr   76 (266)
                      .++.++.   +..||+|.++|.+ .+|+|.+++..      ++|+  .+|+|..     ...++|||++.|+|+..|+||
T Consensus        69 ~~~~~~~~~~~~~gC~C~~~C~~-~~C~C~~~~~~------~~y~--~~g~l~~~~~~~~~~~i~EC~~~C~C~~~C~Nr  139 (287)
T 3hna_A           69 SPMNIDRNITHLQYCVCIDDCSS-SNCMCGQLSMR------CWYD--KDGRLLPEFNMAEPPLIFECNHACSCWRNCRNR  139 (287)
T ss_dssp             SCCCCCCBGGGCCCCCCSSSSCS-TTCHHHHHTSS------CCBC--TTSCBCTTCCSSSCCCEECCCTTSSSCTTCSSC
T ss_pred             CCccccccCCCCCCCcCcCCCCC-CCCcCcccCcc------cccC--CCCcccccccccCCceEEecCCCCCCCCCCCCc
Confidence            4454432   5679999999986 68999987743      5665  5788764     346799999999999999999


Q ss_pred             ccccCCcccEEEEEeCCCceeEEeCCCCCCCCeEEEeeeEEeChhhhhhhccCCCceEEecchhhhhccCCCceeecccc
Q 024518           77 TSQRGLKYRLEVYRTPKKGWAVRSWDFIPAGAPVCEYIGVLRRTEDLDNACDNENNFIFDIDCLQTMRGLGGRERRLRDV  156 (266)
Q Consensus        77 ~~q~~~~~~l~v~~t~~kG~Gv~a~~~I~~G~~I~ey~Gevi~~~e~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~  156 (266)
                      ++|++.+.+|+|++++.+||||||+++|++|+||+||+|||++.+|++.+..  ..|+|+++...               
T Consensus       140 ~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~eY~Gevi~~~e~~~r~~--~~Y~f~l~~~~---------------  202 (287)
T 3hna_A          140 VVQNGLRARLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELISDSEADVREE--DSYLFDLDNKD---------------  202 (287)
T ss_dssp             SGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEEECEEEEEHHHHHTCSC--CTTEEESCCSS---------------
T ss_pred             ccCcCCcccEEEEEcCCCceEEEeCcccCCCCEEEEeeeEEccHHHHhhhcc--cceEEEeccCC---------------
Confidence            9999999999999999999999999999999999999999999999886643  78998875311               


Q ss_pred             cceeecCCCCCCCcccCCCCceEEeCCCCCceeeeeccCCCCCceEEEEEeccCCCCccEEEEEEcCCCCCCCeeEeecC
Q 024518          157 SISTIYNSDRPDDQKVENTPDYCIDAGAVGNVARFINHSCEPNLFVQCVLSSHHDLKLARVVLFAADNIPPLQELTYDYG  236 (266)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~IDa~~~Gn~~RfiNHSC~PN~~~~~v~~~~~~~~~~~i~~fA~rdI~~GeELT~dYg  236 (266)
                                        ...++|||+.+||++|||||||+||+.++.|+..+.++..++|+|||+|||++||||||||+
T Consensus       203 ------------------~~~~~IDa~~~GN~aRFiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~RdI~~GEELT~dYg  264 (287)
T 3hna_A          203 ------------------GEVYCIDARFYGNVSRFINHHCEPNLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGFDYG  264 (287)
T ss_dssp             ------------------SSCEEEEEEEEECGGGGCEECSSCSEEEEEEESSCCCTTCCEEEEEESSCBCTTCBCEECCC
T ss_pred             ------------------CceEEEeccccCCchheeeecCCCCceeEEEEEecCCCCceeEEEEEcceeCCCCeEEEeCC
Confidence                              01389999999999999999999999999999888888899999999999999999999999


Q ss_pred             CCCCCCCCCCCCccCeeeeeCCCCcccc
Q 024518          237 YELDSVHGPDGKVKQMVCYCGAEGCRGR  264 (266)
Q Consensus       237 ~~~~~~~~~~~~~~~~~C~Cgs~~Crg~  264 (266)
                      ..+|....     +.+.|+|||++|||.
T Consensus       265 ~~~~~~~~-----~~~~C~CGs~~CRgs  287 (287)
T 3hna_A          265 ERFWDIKG-----KLFSCRCGSPKCRHS  287 (287)
T ss_dssp             HHHHHHHT-----TTCCCCCCCTTCSCC
T ss_pred             CcccccCC-----CcCEeeCCCCCCCCC
Confidence            87764321     358999999999984


No 3  
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=100.00  E-value=8.6e-57  Score=396.43  Aligned_cols=241  Identities=29%  Similarity=0.626  Sum_probs=166.9

Q ss_pred             ccCCCCCCCC--CCCCcccCC--CCCCCCCcccccccccCC--------CCCCCcccccC--CCee----eeccceEEEc
Q 024518            2 QVAKGVKLPT--TAIGCDCRG--NCLNSHDCSCAKLNSTDS--------KHYDFPYVHRD--GGRL----VEAKAVVFEC   63 (266)
Q Consensus         2 ~~~~~~~~~~--~~~gC~C~~--~C~~~~~C~C~~~~~~~~--------~~~~~~y~~~~--~g~l----~~~~~~~~EC   63 (266)
                      ++.+++.++.  +..||+|.+  +|.. .+|+|.+.++.++        ....|+|....  .|.|    +..+.++|||
T Consensus        34 ~~~~~~~~~~~~~~~gC~C~~~~~C~~-~~C~C~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~g~l~~~~~~~~~~i~EC  112 (302)
T 1ml9_A           34 IIGKNVPVADQSFRVGCSCASDEECMY-STCQCLDEMAPDSDEEADPYTRKKRFAYYSQGAKKGLLRDRVLQSQEPIYEC  112 (302)
T ss_dssp             EECTTCCCCCGGGCCCCCCSSTTGGGS-TTSGGGTTSCCC-----------CCSSBBCSSTTBTSBCHHHHHHCCCEECC
T ss_pred             ecCCCccccCcccCCCccCcCCCCcCC-CCCcChhhccccccccccccccccccccccCCcccceeehhcccCCCCeEec
Confidence            3566777653  679999998  8984 6899999876421        12357886432  3444    2356889999


Q ss_pred             CCCCCCCCCCCCcccccCCcccEEEEEeCCCceeEEeCCCCCCCCeEEEeeeEEeChhhhhhhcc------CCCceEEec
Q 024518           64 GPKCGCGPDCINRTSQRGLKYRLEVYRTPKKGWAVRSWDFIPAGAPVCEYIGVLRRTEDLDNACD------NENNFIFDI  137 (266)
Q Consensus        64 ~~~C~C~~~C~Nr~~q~~~~~~l~v~~t~~kG~Gv~a~~~I~~G~~I~ey~Gevi~~~e~~~~~~------~~~~y~~~l  137 (266)
                      ++.|+|+..|+||++|+|++.+|+|++++.+||||||+++|++|+||+||+|||++.+|++++..      ....|+|.+
T Consensus       113 ~~~C~C~~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~~~~~~~~~~Y~f~l  192 (302)
T 1ml9_A          113 HQGCACSKDCPNRVVERGRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLGEIITSEEADRRRAESTIARRKDVYLFAL  192 (302)
T ss_dssp             CTTCSSCTTCTTCHHHHCCCSCEEEEECSSSCEEEECSSCBCTTCEEEECCCEEECHHHHHHHHHHSCGGGCHHHHEEEC
T ss_pred             CCCCCCCCCCCCcccccCCccceEEEEcCCCceEEEECCeeCCCCEEEEEeeEEeCHHHHHHHHHHHhhhcCCceEEEEe
Confidence            99999999999999999999999999999999999999999999999999999999999886532      235688887


Q ss_pred             chhhhhccCCCceeecccccceeecCCCCCCCcccCCCCceEEeCCCCCceeeeeccCCCCCceEEEEEeccCCCCccEE
Q 024518          138 DCLQTMRGLGGRERRLRDVSISTIYNSDRPDDQKVENTPDYCIDAGAVGNVARFINHSCEPNLFVQCVLSSHHDLKLARV  217 (266)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IDa~~~Gn~~RfiNHSC~PN~~~~~v~~~~~~~~~~~i  217 (266)
                      +........                       ........++|||+.+||++|||||||+||+.++.++.+..+...++|
T Consensus       193 ~~~~~~~~~-----------------------d~~~~~~~~~IDa~~~GN~arfiNHSC~PN~~~~~~~~~~~~~~~~~i  249 (302)
T 1ml9_A          193 DKFSDPDSL-----------------------DPLLAGQPLEVDGEYMSGPTRFINHSCDPNMAIFARVGDHADKHIHDL  249 (302)
T ss_dssp             CSSCCSSSS-----------------------CHHHHSCCCEEECSSEECGGGGCEECSSCSEEEEEEESSGGGGGGCEE
T ss_pred             ccccCcccc-----------------------cccccCCcEEEeCcccCCHHHhcccCCCCCeeEEEEEeccCCCCceEE
Confidence            532100000                       000001248999999999999999999999998877666556667899


Q ss_pred             EEEEcCCCCCCCeeEeecCCCCCCCCCC---CCC-ccCeeeeeCCCCcccccC
Q 024518          218 VLFAADNIPPLQELTYDYGYELDSVHGP---DGK-VKQMVCYCGAEGCRGRLF  266 (266)
Q Consensus       218 ~~fA~rdI~~GeELT~dYg~~~~~~~~~---~~~-~~~~~C~Cgs~~Crg~l~  266 (266)
                      +|||+|||++||||||||++.+|.....   ..+ ...+.|+|||++|||+||
T Consensus       250 ~~~A~rdI~~GeELt~dY~~~~~~~~~~~~~~~k~~~~~~C~CGs~~Crg~l~  302 (302)
T 1ml9_A          250 ALFAIKDIPKGTELTFDYVNGLTGLESDAHDPSKISEMTKCLCGTAKCRGYLW  302 (302)
T ss_dssp             EEEESSCBCTTCEEEECTTC---------------------------------
T ss_pred             EEEECCCcCCCCEEEEEECCCccccccccccccccCCCcEeeCCCCcCccccC
Confidence            9999999999999999999887753210   011 134799999999999998


No 4  
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=100.00  E-value=1.3e-54  Score=380.88  Aligned_cols=220  Identities=34%  Similarity=0.711  Sum_probs=176.4

Q ss_pred             ccCCCCCCC-CCCCCcccCCCCCCCCCcccccccccCCCCCCCcccccCCCeee-eccceEEEcCCCCCCCCCCCCcccc
Q 024518            2 QVAKGVKLP-TTAIGCDCRGNCLNSHDCSCAKLNSTDSKHYDFPYVHRDGGRLV-EAKAVVFECGPKCGCGPDCINRTSQ   79 (266)
Q Consensus         2 ~~~~~~~~~-~~~~gC~C~~~C~~~~~C~C~~~~~~~~~~~~~~y~~~~~g~l~-~~~~~~~EC~~~C~C~~~C~Nr~~q   79 (266)
                      .+.+|+.++ ....||+|.+ |.+ ..| |......     .++|+  .+|+|. ....++|||++.|+|+..|+||++|
T Consensus        66 ~~~~~~~~~~~~~~gC~C~~-C~~-~~c-c~~~~~~-----~~~Y~--~~g~l~~~~~~~i~EC~~~C~C~~~C~Nr~~q  135 (300)
T 2r3a_A           66 KPAPGISLVNEATFGCSCTD-CFF-QKC-CPAEAGV-----LLAYN--KNQQIKIPPGTPIYECNSRCQCGPDCPNRIVQ  135 (300)
T ss_dssp             EECTTCCCC---CCCCCCSS-TTT-SSC-HHHHTTS-----CCSBC--TTSCBCSCTTCCEECCCTTSSCCTTCTTCSGG
T ss_pred             ccCCCCccCCCCCCCcCCcC-CCC-CCc-chhhccC-----ccccc--cCCcEeccCCCcEEeCCCCCCCCCcCCCcccc
Confidence            356778874 5889999984 875 345 6555554     67886  467764 5567899999999999999999999


Q ss_pred             cCCcccEEEEEeC-CCceeEEeCCCCCCCCeEEEeeeEEeChhhhhhhcc----CCCceEEecchhhhhccCCCceeecc
Q 024518           80 RGLKYRLEVYRTP-KKGWAVRSWDFIPAGAPVCEYIGVLRRTEDLDNACD----NENNFIFDIDCLQTMRGLGGRERRLR  154 (266)
Q Consensus        80 ~~~~~~l~v~~t~-~kG~Gv~a~~~I~~G~~I~ey~Gevi~~~e~~~~~~----~~~~y~~~l~~~~~~~~~~~~~~~~~  154 (266)
                      +|.+.+|+||++. .+||||||+++|++|+||+||+|||++.++++++..    .+..|+|+++..              
T Consensus       136 ~g~~~~l~vfrt~~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~ea~~R~~~y~~~~~~Y~f~l~~~--------------  201 (300)
T 2r3a_A          136 KGTQYSLCIFRTSNGRGWGVKTLVKIKRMSFVMEYVGEVITSEEAERRGQFYDNKGITYLFDLDYE--------------  201 (300)
T ss_dssp             GCCCSCEEEEECSSSCCEEEEESSCBCTTCEEEEECCEEEEHHHHHHHHHTCCHHHHHTEEECCSS--------------
T ss_pred             ccccccEEEEEeCCCceEEEEeCccccCCCEeEEEeeEEecHHHHHHHHHHhhhccccEEEEeecC--------------
Confidence            9999999999996 699999999999999999999999999999886543    134677766421              


Q ss_pred             cccceeecCCCCCCCcccCCCCceEEeCCCCCceeeeeccCCCCCceEEEEEeccCCCCccEEEEEEcCCCCCCCeeEee
Q 024518          155 DVSISTIYNSDRPDDQKVENTPDYCIDAGAVGNVARFINHSCEPNLFVQCVLSSHHDLKLARVVLFAADNIPPLQELTYD  234 (266)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~IDa~~~Gn~~RfiNHSC~PN~~~~~v~~~~~~~~~~~i~~fA~rdI~~GeELT~d  234 (266)
                                          ...++|||+.+||++|||||||+||+.+..|+.++.+...++|+|||+|||++|||||||
T Consensus       202 --------------------~~~~~IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~rdI~~GEELt~d  261 (300)
T 2r3a_A          202 --------------------SDEFTVDAARYGNVSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTINAGEELTFD  261 (300)
T ss_dssp             --------------------CSSEEEECSSEECGGGGCEECSSCSEEEEEEESSCCCTTSCEEEEEESSCBCTTCEEEEC
T ss_pred             --------------------CceEEEecccccChHHheecCCCCCEEEEEEEeccCCCCceEEEEEEccCCCCCCEEEEE
Confidence                                013899999999999999999999999999988877778899999999999999999999


Q ss_pred             cCCCCCCCC-----C--CCCCccCeeeeeCCCCccccc
Q 024518          235 YGYELDSVH-----G--PDGKVKQMVCYCGAEGCRGRL  265 (266)
Q Consensus       235 Yg~~~~~~~-----~--~~~~~~~~~C~Cgs~~Crg~l  265 (266)
                      |++......     +  ...+...+.|+|||++|||+|
T Consensus       262 Y~~~~~~~~~~~~~d~~~~~~~~~~~C~CGs~~Crg~l  299 (300)
T 2r3a_A          262 YQMKGSGDISSDSIDHSPAKKRVRTVCKCGAVTCRGYL  299 (300)
T ss_dssp             GGGSSCC--------------CCCCBCCCCCTTCCSBC
T ss_pred             CCCCccccccccccccccccccCCCEeeCCCccccccC
Confidence            998732110     0  011123579999999999997


No 5  
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=100.00  E-value=1.1e-53  Score=373.71  Aligned_cols=221  Identities=34%  Similarity=0.655  Sum_probs=172.9

Q ss_pred             cCCCCCCCC---CCCCcccCCCCCCCCCcccccccccCCCCCCCcccccCCCee------eeccceEEEcCCCCCCCCCC
Q 024518            3 VAKGVKLPT---TAIGCDCRGNCLNSHDCSCAKLNSTDSKHYDFPYVHRDGGRL------VEAKAVVFECGPKCGCGPDC   73 (266)
Q Consensus         3 ~~~~~~~~~---~~~gC~C~~~C~~~~~C~C~~~~~~~~~~~~~~y~~~~~g~l------~~~~~~~~EC~~~C~C~~~C   73 (266)
                      +.+|+.++.   ...||+|.++++++.+|+|.+.+..        |+  .+++|      .....++|||++.|+|+..|
T Consensus        46 ~~~~~~~~~~~~~~~gC~C~~~~C~~~~C~C~~~~~~--------y~--~~~~l~~~~~~~~~~~~~~EC~~~C~C~~~C  115 (290)
T 3bo5_A           46 VGPGADIDPTQITFPGCICVKTPCLPGTCSCLRHGEN--------YD--DNSCLRDIGSGGKYAEPVFECNVLCRCSDHC  115 (290)
T ss_dssp             ECTTCSSCTTSCCCCCCCCCSSCCCTTTCGGGTTSCS--------BC--TTSCBCC-----CCCCCEECCCTTCCSCTTC
T ss_pred             cCCCCcCCcccccCCCCCCCCCCcCCCCCcchhhcCc--------cC--ccccccccccccccCCceEeCCCCCCCCCCC
Confidence            345665532   4579999975445678999986543        32  12332      23457899999999999999


Q ss_pred             CCcccccCCcccEEEEEeCCCceeEEeCCCCCCCCeEEEeeeEEeChhhhhhhcc----CCCceEEecchhhhhccCCCc
Q 024518           74 INRTSQRGLKYRLEVYRTPKKGWAVRSWDFIPAGAPVCEYIGVLRRTEDLDNACD----NENNFIFDIDCLQTMRGLGGR  149 (266)
Q Consensus        74 ~Nr~~q~~~~~~l~v~~t~~kG~Gv~a~~~I~~G~~I~ey~Gevi~~~e~~~~~~----~~~~y~~~l~~~~~~~~~~~~  149 (266)
                      +||++|+|++.+|+|++++.+||||||+++|++|+||+||+||||+.+|++++..    ....|+|.++...        
T Consensus       116 ~Nr~~q~g~~~~l~V~~s~~~G~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~~~~~~~~Y~~~l~~~~--------  187 (290)
T 3bo5_A          116 RNRVVQKGLQFHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEVLGFSEVQRRIHLQTKSDSNYIIAIREHV--------  187 (290)
T ss_dssp             TTCCGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHTTCCSSCCCCCEEEEECC--------
T ss_pred             CCeEcccCCcccEEEEEcCCCcceEeECCccCCCCEEEEEeeEEeCHHHHHHHHHhhcccCCcceeeecccc--------
Confidence            9999999999999999999999999999999999999999999999999886543    2457888764210        


Q ss_pred             eeecccccceeecCCCCCCCcccCCCCceEEeCCCCCceeeeeccCCCCCceEEEEEeccCCCCccEEEEEEcCCCCCCC
Q 024518          150 ERRLRDVSISTIYNSDRPDDQKVENTPDYCIDAGAVGNVARFINHSCEPNLFVQCVLSSHHDLKLARVVLFAADNIPPLQ  229 (266)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IDa~~~Gn~~RfiNHSC~PN~~~~~v~~~~~~~~~~~i~~fA~rdI~~Ge  229 (266)
                          ...                 ....++|||+.+||++|||||||+||+.++.|..+.   ..++|+|||+|||++||
T Consensus       188 ----~~~-----------------~~~~~~IDa~~~GN~arfiNHSC~PN~~~~~~~~~~---~~~~i~~~A~rdI~~GE  243 (290)
T 3bo5_A          188 ----YNG-----------------QVMETFVDPTYIGNIGRFLNHSCEPNLLMIPVRIDS---MVPKLALFAAKDIVPEE  243 (290)
T ss_dssp             --------------------------EEEEEEEEEEECGGGGCEECSSCSEEEEEEESSS---SSCEEEEEESSCBCTTC
T ss_pred             ----cCC-----------------ccceeEEeeeecCCchheeeecCCCCEEEEEEEeCC---CceEEEEEEccccCCCC
Confidence                000                 001378999999999999999999999998776543   35899999999999999


Q ss_pred             eeEeecCCCCCCCCCCC------CCccCeeeeeCCCCccccc
Q 024518          230 ELTYDYGYELDSVHGPD------GKVKQMVCYCGAEGCRGRL  265 (266)
Q Consensus       230 ELT~dYg~~~~~~~~~~------~~~~~~~C~Cgs~~Crg~l  265 (266)
                      ||||||+..+|......      .....+.|+|||++|||+|
T Consensus       244 ELt~dY~~~~~~~~~~~~~~~~~~~~~~~~C~CGs~~CrG~l  285 (290)
T 3bo5_A          244 ELSYDYSGRYLNLTVSASKERLDHGKLRKPCYCGAKSCTAFL  285 (290)
T ss_dssp             EEEECTTSCTTCCSSSEEEEEEECSSCCCBCCCCCTTCCSBC
T ss_pred             EEEEECCCccccccccccccccccCCCCccccCCCcCCCccC
Confidence            99999999887643211      0123579999999999998


No 6  
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=100.00  E-value=2e-50  Score=341.22  Aligned_cols=186  Identities=34%  Similarity=0.658  Sum_probs=153.4

Q ss_pred             CCCCcccCCCCCCCCCcccccccccCCCCCCCcccccCCCeeeeccceEEEcCC-CCCCCCCCCCcccccCCcc-cEEEE
Q 024518           12 TAIGCDCRGNCLNSHDCSCAKLNSTDSKHYDFPYVHRDGGRLVEAKAVVFECGP-KCGCGPDCINRTSQRGLKY-RLEVY   89 (266)
Q Consensus        12 ~~~gC~C~~~C~~~~~C~C~~~~~~~~~~~~~~y~~~~~g~l~~~~~~~~EC~~-~C~C~~~C~Nr~~q~~~~~-~l~v~   89 (266)
                      ....|+|...+.+ ..|.|..   .                 ..++..++||++ .|+|+..|+||++|++... +|+|+
T Consensus        21 ~~~~C~C~~~~~~-~~~~c~~---~-----------------C~nr~~~~EC~~~~C~C~~~C~Nr~~q~~~~~~~lev~   79 (222)
T 3ope_A           21 EATTCNCKKPDDD-TRKGCVD---D-----------------CLNRMIFAECSPNTCPCGEQCCNQRIQRHEWVQCLERF   79 (222)
T ss_dssp             CCCCCCCCCCSCS-SSCSSCS---C-----------------CTTGGGTBCCCTTTCTTTTSCSSCTTTTTCCCSCCEEE
T ss_pred             cCccccCcCCCcC-CCCCCcc---c-----------------CcCcCeEeEeCCCCCcCCCCCCCceEeCCCccccEEEE
Confidence            6688999865432 3344432   0                 124556799998 7999999999999998765 59999


Q ss_pred             EeCCCceeEEeCCCCCCCCeEEEeeeEEeChhhhhhhcc-----CCCceEEecchhhhhccCCCceeecccccceeecCC
Q 024518           90 RTPKKGWAVRSWDFIPAGAPVCEYIGVLRRTEDLDNACD-----NENNFIFDIDCLQTMRGLGGRERRLRDVSISTIYNS  164 (266)
Q Consensus        90 ~t~~kG~Gv~a~~~I~~G~~I~ey~Gevi~~~e~~~~~~-----~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (266)
                      +++.+||||||+++|++|+||+||+|||++.+|+.++..     ....|+|.++.                         
T Consensus        80 ~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~y~~~l~~-------------------------  134 (222)
T 3ope_A           80 RAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRMIEQYHNHSDHYCLNLDS-------------------------  134 (222)
T ss_dssp             ECTTSSEEEECSSCBCTTCEEEECCSEEECHHHHHHHHHHTSTTCCSCCEEEEET-------------------------
T ss_pred             EcCCCceEEEECceECCCCEEEEecceecCHHHHHHHHHHHhcccCCeEEEecCC-------------------------
Confidence            999999999999999999999999999999998875421     23456665531                         


Q ss_pred             CCCCCcccCCCCceEEeCCCCCceeeeeccCCCCCceEEEEEeccCCCCccEEEEEEcCCCCCCCeeEeecCCCCCCCCC
Q 024518          165 DRPDDQKVENTPDYCIDAGAVGNVARFINHSCEPNLFVQCVLSSHHDLKLARVVLFAADNIPPLQELTYDYGYELDSVHG  244 (266)
Q Consensus       165 ~~~~~~~~~~~~~~~IDa~~~Gn~~RfiNHSC~PN~~~~~v~~~~~~~~~~~i~~fA~rdI~~GeELT~dYg~~~~~~~~  244 (266)
                                  .++|||+.+||+||||||||+||+.++.|..+    ..++|+|||+|||++||||||||++++|... 
T Consensus       135 ------------~~~IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~----~~~~i~~~A~RdI~~GEELT~dY~~~~~~~~-  197 (222)
T 3ope_A          135 ------------GMVIDSYRMGNEARFINHSCDPNCEMQKWSVN----GVYRIGLYALKDMPAGTELTYDYNFHSFNVE-  197 (222)
T ss_dssp             ------------TEEEECSSEECGGGGCEECSSCSEEEEEEEET----TEEEEEEEESSCBCTTCBCEECTTSSBCCCS-
T ss_pred             ------------CEEEeCccccccceeeccCCCCCeEeEEEEEC----CeEEEEEEECCccCCCCEEEEECCCcccCCc-
Confidence                        38999999999999999999999999887664    3589999999999999999999999887542 


Q ss_pred             CCCCccCeeeeeCCCCccccc
Q 024518          245 PDGKVKQMVCYCGAEGCRGRL  265 (266)
Q Consensus       245 ~~~~~~~~~C~Cgs~~Crg~l  265 (266)
                           ..+.|+|||++|||+|
T Consensus       198 -----~~~~C~CGs~~Crg~i  213 (222)
T 3ope_A          198 -----KQQLCKCGFEKCRGII  213 (222)
T ss_dssp             -----CCCBCCCCCTTCCSBC
T ss_pred             -----CCCEeeCCCcCCCCcc
Confidence                 3589999999999987


No 7  
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=100.00  E-value=1.9e-50  Score=343.26  Aligned_cols=161  Identities=36%  Similarity=0.615  Sum_probs=140.5

Q ss_pred             cceEEEcCC-CCCCCCCCCCcccccCCcccEEEEEeCCCceeEEeCCCCCCCCeEEEeeeEEeChhhhhhhcc------C
Q 024518           57 KAVVFECGP-KCGCGPDCINRTSQRGLKYRLEVYRTPKKGWAVRSWDFIPAGAPVCEYIGVLRRTEDLDNACD------N  129 (266)
Q Consensus        57 ~~~~~EC~~-~C~C~~~C~Nr~~q~~~~~~l~v~~t~~kG~Gv~a~~~I~~G~~I~ey~Gevi~~~e~~~~~~------~  129 (266)
                      +.++|||++ .|+|+..|+||++|++...+|+|++++.+||||||+++|++|+||+||+|||++.++++.+..      .
T Consensus        64 r~~~~EC~~~~C~c~~~C~Nr~~q~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~  143 (232)
T 3ooi_A           64 RMLLYECHPTVCPAGGRCQNQCFSKRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRYAQEHDI  143 (232)
T ss_dssp             HHTTBCCCTTTCTTGGGCCCCHHHHTCCCCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHHHHHHTTC
T ss_pred             cCceeEeCCCCCCCCCCcCCccccCCCCccEEEEEcCCceeEEEECceecCCceeeEeeeeccCHHHHHHHHHHHhhcCC
Confidence            446799998 699999999999999999999999999999999999999999999999999999998875432      1


Q ss_pred             CCceEEecchhhhhccCCCceeecccccceeecCCCCCCCcccCCCCceEEeCCCCCceeeeeccCCCCCceEEEEEecc
Q 024518          130 ENNFIFDIDCLQTMRGLGGRERRLRDVSISTIYNSDRPDDQKVENTPDYCIDAGAVGNVARFINHSCEPNLFVQCVLSSH  209 (266)
Q Consensus       130 ~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IDa~~~Gn~~RfiNHSC~PN~~~~~v~~~~  209 (266)
                      ...|+|.++                                     ..++|||+..||++|||||||+||+.++.|.+.+
T Consensus       144 ~~~y~~~l~-------------------------------------~~~~IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~  186 (232)
T 3ooi_A          144 TNFYMLTLD-------------------------------------KDRIIDAGPKGNYARFMNHCCQPNCETQKWSVNG  186 (232)
T ss_dssp             CCCCEEEEE-------------------------------------TTEEEEEEEEECGGGGCEECSSCSEEEEEEEETT
T ss_pred             CceeeeecC-------------------------------------cceEEeccccccccccccccCCCCeEEEEEEECC
Confidence            234555442                                     1389999999999999999999999998877653


Q ss_pred             CCCCccEEEEEEcCCCCCCCeeEeecCCCCCCCCCCCCCccCeeeeeCCCCccccc
Q 024518          210 HDLKLARVVLFAADNIPPLQELTYDYGYELDSVHGPDGKVKQMVCYCGAEGCRGRL  265 (266)
Q Consensus       210 ~~~~~~~i~~fA~rdI~~GeELT~dYg~~~~~~~~~~~~~~~~~C~Cgs~~Crg~l  265 (266)
                          .++|+|||+|||++||||||||+.++|..       ..+.|+|||++|||+|
T Consensus       187 ----~~~i~~~A~RdI~~GEELT~dY~~~~~~~-------~~~~C~CGs~~CrG~l  231 (232)
T 3ooi_A          187 ----DTRVGLFALSDIKAGTELTFNYNLECLGN-------GKTVCKCGAPNCSGFL  231 (232)
T ss_dssp             ----EEEEEEEESSCBCTTCBCEECCTTCSTTC-------TTCBCCCCCTTCCSBC
T ss_pred             ----ceEEEEEECCccCCCCEEEEECCCCcCCC-------CCcEeECCCCcCcCcC
Confidence                48999999999999999999999987642       2589999999999997


No 8  
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=100.00  E-value=5.5e-50  Score=347.70  Aligned_cols=163  Identities=34%  Similarity=0.595  Sum_probs=140.9

Q ss_pred             ccceEEEcCCCCCCCCCCCCcccccCCcccEEEEEeCCCceeEEeCCCCCCCCeEEEeeeEEeChhhhhhhcc------C
Q 024518           56 AKAVVFECGPKCGCGPDCINRTSQRGLKYRLEVYRTPKKGWAVRSWDFIPAGAPVCEYIGVLRRTEDLDNACD------N  129 (266)
Q Consensus        56 ~~~~~~EC~~~C~C~~~C~Nr~~q~~~~~~l~v~~t~~kG~Gv~a~~~I~~G~~I~ey~Gevi~~~e~~~~~~------~  129 (266)
                      ++..+|||++.|+|+..|+||++|++...+|+|++++.+||||||+++|++|+||+||+||||+.++++.+..      .
T Consensus        89 nr~~~~EC~~~C~C~~~C~Nr~~q~g~~~~leV~~t~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~y~~~~~  168 (278)
T 3h6l_A           89 NRLLMIECSSRCPNGDYCSNRRFQRKQHADVEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVLDHKEFKARVKEYARNKN  168 (278)
T ss_dssp             TGGGTBCCCTTCTTGGGCSSCTTTTTCCCCEEEEECSSSCEEEEESSCBCTTCEEEECCCEEECHHHHHHHHHHHHHTTC
T ss_pred             CcceEeccCCCCCcCCCCCCccccCCCccCEEEEEcCCCceEEEeCCccCCCCEeEEeeeeecCHHHHHHHHHHHHhccC
Confidence            4456799999999999999999999999999999999999999999999999999999999999999875432      1


Q ss_pred             CCceEEecchhhhhccCCCceeecccccceeecCCCCCCCcccCCCCceEEeCCCCCceeeeeccCCCCCceEEEEEecc
Q 024518          130 ENNFIFDIDCLQTMRGLGGRERRLRDVSISTIYNSDRPDDQKVENTPDYCIDAGAVGNVARFINHSCEPNLFVQCVLSSH  209 (266)
Q Consensus       130 ~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IDa~~~Gn~~RfiNHSC~PN~~~~~v~~~~  209 (266)
                      ...|++.++                                     ..++|||+.+||++|||||||+||+.++.|.+++
T Consensus       169 ~~~y~~~l~-------------------------------------~~~~IDa~~~GN~aRFiNHSC~PN~~~~~~~v~g  211 (278)
T 3h6l_A          169 IHYYFMALK-------------------------------------NDEIIDATQKGNCSRFMNHSCEPNCETQKWTVNG  211 (278)
T ss_dssp             CCCCEEEEE-------------------------------------TTEEEECSSEECGGGGCEECSSCSEEEEEEEETT
T ss_pred             ccceeeccc-------------------------------------CCeEEeCcccCChhhhcccCCCCCceeEEEEeCC
Confidence            122333321                                     1378999999999999999999999998877753


Q ss_pred             CCCCccEEEEEEcCCCCCCCeeEeecCCCCCCCCCCCCCccCeeeeeCCCCcccccC
Q 024518          210 HDLKLARVVLFAADNIPPLQELTYDYGYELDSVHGPDGKVKQMVCYCGAEGCRGRLF  266 (266)
Q Consensus       210 ~~~~~~~i~~fA~rdI~~GeELT~dYg~~~~~~~~~~~~~~~~~C~Cgs~~Crg~l~  266 (266)
                          .++|+|||+|||++||||||||++.++..       ..+.|+|||++|||+|.
T Consensus       212 ----~~ri~~fA~RdI~~GEELT~dY~~~~~~~-------~~~~C~CGs~~Crg~l~  257 (278)
T 3h6l_A          212 ----QLRVGFFTTKLVPSGSELTFDYQFQRYGK-------EAQKCFCGSANCRGYLG  257 (278)
T ss_dssp             ----EEEEEEEESSCBCTTCBCEECCTTTEECS-------SCEECCCCCTTCCSEEC
T ss_pred             ----ceEEEEEECCccCCCCEEEEecCCCcCCC-------CCcEeECCCCCCeeecC
Confidence                48999999999999999999999987642       35899999999999984


No 9  
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=100.00  E-value=7.4e-43  Score=287.64  Aligned_cols=150  Identities=34%  Similarity=0.528  Sum_probs=123.8

Q ss_pred             CCCCCCCcccccCCcccEEEEEeCCCceeEEeCCCCCCCCeEEEeeeEEeChhhhhhhcc-----CCCceEEecchhhhh
Q 024518           69 CGPDCINRTSQRGLKYRLEVYRTPKKGWAVRSWDFIPAGAPVCEYIGVLRRTEDLDNACD-----NENNFIFDIDCLQTM  143 (266)
Q Consensus        69 C~~~C~Nr~~q~~~~~~l~v~~t~~kG~Gv~a~~~I~~G~~I~ey~Gevi~~~e~~~~~~-----~~~~y~~~l~~~~~~  143 (266)
                      +...|+++.+|++.+.+|+|++++.+||||||+++|++|++|+||+|||++..+++.+..     ....|+|.++.    
T Consensus        37 ~~~~~~~~~l~~~~~~~l~V~~s~~~G~GlfA~~~I~~G~~I~EY~Gevi~~~e~~~R~~~y~~~~~~~Y~f~l~~----  112 (192)
T 2w5y_A           37 LPMPMRFRHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGNVIRSIQTDKREKYYDSKGIGCYMFRIDD----  112 (192)
T ss_dssp             CCHHHHHTTHHHHHHHHEEEEECSSSSEEEEESSCBCTTCEEEECCSEEEEGGGHHHHHHHHHHHTCCCCEEECSS----
T ss_pred             CCcchhHHHHhccCCCcEEEEEcCCceeEEEECcccCCCCEEEEeeeeEechHHHHHHHHHHhhcCCceeeeeecC----
Confidence            334678888999999999999999999999999999999999999999999988775432     12356665531    


Q ss_pred             ccCCCceeecccccceeecCCCCCCCcccCCCCceEEeCCCCCceeeeeccCCCCCceEEEEEeccCCCCccEEEEEEcC
Q 024518          144 RGLGGRERRLRDVSISTIYNSDRPDDQKVENTPDYCIDAGAVGNVARFINHSCEPNLFVQCVLSSHHDLKLARVVLFAAD  223 (266)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IDa~~~Gn~~RfiNHSC~PN~~~~~v~~~~~~~~~~~i~~fA~r  223 (266)
                                                       .++|||+..||++|||||||+||+.+..|..++    .++|+|||+|
T Consensus       113 ---------------------------------~~~IDa~~~Gn~arfiNHSC~PN~~~~~~~~~g----~~~i~i~A~r  155 (192)
T 2w5y_A          113 ---------------------------------SEVVDATMHGNAARFINHSCEPNCYSRVINIDG----QKHIVIFAMR  155 (192)
T ss_dssp             ---------------------------------SEEEECTTTCCGGGGCEECSSCSEEEEEEEETT----EEEEEEEESS
T ss_pred             ---------------------------------ceEEECccccChhHhhccCCCCCEEEEEEEECC----cEEEEEEECc
Confidence                                             379999999999999999999999988776643    4799999999


Q ss_pred             CCCCCCeeEeecCCCCCCCCCCCCCccCeeeeeCCCCccccc
Q 024518          224 NIPPLQELTYDYGYELDSVHGPDGKVKQMVCYCGAEGCRGRL  265 (266)
Q Consensus       224 dI~~GeELT~dYg~~~~~~~~~~~~~~~~~C~Cgs~~Crg~l  265 (266)
                      ||++|||||+||+..+|...      ..+.|.|||++|||+|
T Consensus       156 dI~~GEELt~dY~~~~~~~~------~~~~C~Cgs~~Crg~l  191 (192)
T 2w5y_A          156 KIYRGEELTYDYKFPIEDAS------NKLPCNCGAKKCRKFL  191 (192)
T ss_dssp             CBCTTCEEEECCCC-------------CCBCCCCCTTCCSBC
T ss_pred             ccCCCCEEEEEcCCchhcCC------CCceeECCCCCCcCcC
Confidence            99999999999999887532      3589999999999997


No 10 
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=100.00  E-value=1.2e-36  Score=246.34  Aligned_cols=130  Identities=24%  Similarity=0.341  Sum_probs=109.4

Q ss_pred             CCcccccCCcccEEEEEeCCCceeEEeCCCCCCCCeEEEeeeEEeChhhhhhhcc------CCCceEEecchhhhhccCC
Q 024518           74 INRTSQRGLKYRLEVYRTPKKGWAVRSWDFIPAGAPVCEYIGVLRRTEDLDNACD------NENNFIFDIDCLQTMRGLG  147 (266)
Q Consensus        74 ~Nr~~q~~~~~~l~v~~t~~kG~Gv~a~~~I~~G~~I~ey~Gevi~~~e~~~~~~------~~~~y~~~l~~~~~~~~~~  147 (266)
                      .++++|+|...+|+|++++++||||||+++|++|++|+||+|++++..+++.+..      ....|+|.+...       
T Consensus        20 ~~~~~q~g~~~~l~v~~~~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~y~~~~~~~-------   92 (166)
T 3f9x_A           20 IDELIESGKEEGMKIDLIDGKGRGVIATKQFSRGDFVVEYHGDLIEITDAKKREALYAQDPSTGCYMYYFQYL-------   92 (166)
T ss_dssp             HHHHHHHTCCTTEEEEEETTTEEEEEESSCBCTTCEEEECCSEEEEHHHHHHHHHHHTTCTTSCCCEEEEEET-------
T ss_pred             HHHHHHcCCccCeEEEECCCceeEEEECCCcCCCCEEEEeeceEcCHHHHHHHHHHHhhccCCCceEEEEecC-------
Confidence            3578999999999999999999999999999999999999999999998875532      233455543211       


Q ss_pred             CceeecccccceeecCCCCCCCcccCCCCceEEeCCCC-CceeeeeccCCCCCceEEEEEeccCCCCccEEEEEEcCCCC
Q 024518          148 GRERRLRDVSISTIYNSDRPDDQKVENTPDYCIDAGAV-GNVARFINHSCEPNLFVQCVLSSHHDLKLARVVLFAADNIP  226 (266)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IDa~~~-Gn~~RfiNHSC~PN~~~~~v~~~~~~~~~~~i~~fA~rdI~  226 (266)
                                                 ...++|||+.. ||++|||||||.||+.+..+..+    ..++|+|||+|||+
T Consensus        93 ---------------------------~~~~~iDa~~~~Gn~aRfiNHSC~PN~~~~~~~~~----~~~~i~~~A~rdI~  141 (166)
T 3f9x_A           93 ---------------------------SKTYCVDATRETNRLGRLINHSKCGNCQTKLHDID----GVPHLILIASRDIA  141 (166)
T ss_dssp             ---------------------------TEEEEEECCSCCSCSGGGCEECTTCSEEEEEEEET----TEEEEEEEESSCBC
T ss_pred             ---------------------------CCCeEEechhcCCChhheeecCCCCCeeEEEEEEC----CeeEEEEEECCcCC
Confidence                                       01389999996 99999999999999999877664    46899999999999


Q ss_pred             CCCeeEeecCCCCCC
Q 024518          227 PLQELTYDYGYELDS  241 (266)
Q Consensus       227 ~GeELT~dYg~~~~~  241 (266)
                      +||||||||++.++.
T Consensus       142 ~GEELt~dY~~~~~~  156 (166)
T 3f9x_A          142 AGEELLFDYGDRSKA  156 (166)
T ss_dssp             TTCBCEECCCCCCHH
T ss_pred             CCCEEEEEcCCChhh
Confidence            999999999988753


No 11 
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=99.98  E-value=2.2e-32  Score=235.29  Aligned_cols=143  Identities=17%  Similarity=0.158  Sum_probs=112.8

Q ss_pred             ccceEEEcCCCCCCCCCCCCcccccCC-cccEEEEEeCC--CceeEEeCCCCCCCCeEEEeeeEEeChhhhhhhccCCCc
Q 024518           56 AKAVVFECGPKCGCGPDCINRTSQRGL-KYRLEVYRTPK--KGWAVRSWDFIPAGAPVCEYIGVLRRTEDLDNACDNENN  132 (266)
Q Consensus        56 ~~~~~~EC~~~C~C~~~C~Nr~~q~~~-~~~l~v~~t~~--kG~Gv~a~~~I~~G~~I~ey~Gevi~~~e~~~~~~~~~~  132 (266)
                      +..++|+|+..+.. ..|.|..+..+. ...++|.+++.  +||||||+++|++|+||+||+||+|+.++++.+......
T Consensus        81 ~~~~~~~~d~~~~~-~i~~~~~~~~~~~~~~~~v~~S~i~~kG~GvfA~~~I~~G~~I~eY~Gevi~~~e~~~R~~~~~~  159 (261)
T 2f69_A           81 PGNSVYHFDKSTSS-CISTNALLPDPYESERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALNG  159 (261)
T ss_dssp             SSCCEECCCCCCSS-CSCSCTTSCCHHHHTTEEEEECSSTTCCEEEEESSCBCTTCEEEEECCEEECHHHHHTSCGGGCS
T ss_pred             CCCceEecCcccCc-ceeCccccCCcccCceEEEEecCCCCCceEEEECcccCCCCEEEEEeeEEeCHHHHHHHhhhhcc
Confidence            45689999987652 357777766543 46799999875  599999999999999999999999999999866543334


Q ss_pred             eEEecchhhhhccCCCceeecccccceeecCCCCCCCcccCCCCceEEeCC--------CCCceeeeeccCCCCCceEEE
Q 024518          133 FIFDIDCLQTMRGLGGRERRLRDVSISTIYNSDRPDDQKVENTPDYCIDAG--------AVGNVARFINHSCEPNLFVQC  204 (266)
Q Consensus       133 y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IDa~--------~~Gn~~RfiNHSC~PN~~~~~  204 (266)
                      |.|.++                                     ..++||+.        ..||++|||||||+||+.+..
T Consensus       160 ~~f~l~-------------------------------------~~~~IDa~~~~~~~~~~~Gn~aRfiNHSC~PN~~~~~  202 (261)
T 2f69_A          160 NTLSLD-------------------------------------EETVIDVPEPYNHVSKYCASLGHKANHSFTPNCIYDM  202 (261)
T ss_dssp             SCEECS-------------------------------------SSCEEECCTTTTSTTTCCSCCGGGCEECSSCSEEEEE
T ss_pred             ceeeec-------------------------------------CCeEEEccccccccccccccceeeEeeCCCCCeEEEE
Confidence            444332                                     13789995        599999999999999999987


Q ss_pred             EEeccCCCCc-cEEEEEEcCCCCCCCeeEeecCCCCC
Q 024518          205 VLSSHHDLKL-ARVVLFAADNIPPLQELTYDYGYELD  240 (266)
Q Consensus       205 v~~~~~~~~~-~~i~~fA~rdI~~GeELT~dYg~~~~  240 (266)
                      +..    +.. ..|+|||+|||++|||||+||++.+.
T Consensus       203 ~~~----~~~~~~i~i~A~RdI~~GEELt~dYg~~~~  235 (261)
T 2f69_A          203 FVH----PRFGPIKCIRTLRAVEADEELTVAYGYDHS  235 (261)
T ss_dssp             EEE----TTTEEEEEEEESSCBCTTCEEEECCCCCSC
T ss_pred             EEc----CCCCcEEEEEECcccCCCCEEEEEcCCccc
Confidence            632    222 44599999999999999999998765


No 12 
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=99.97  E-value=1.6e-31  Score=204.47  Aligned_cols=111  Identities=23%  Similarity=0.325  Sum_probs=95.1

Q ss_pred             cccEEEEEeCCCceeEEeCCCCCCCCeEEEeeeEEeChhhhhhhccCCCceEEecchhhhhccCCCceeecccccceeec
Q 024518           83 KYRLEVYRTPKKGWAVRSWDFIPAGAPVCEYIGVLRRTEDLDNACDNENNFIFDIDCLQTMRGLGGRERRLRDVSISTIY  162 (266)
Q Consensus        83 ~~~l~v~~t~~kG~Gv~a~~~I~~G~~I~ey~Gevi~~~e~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  162 (266)
                      ..+++|++++.+||||||+++|++|++|+||.|++++.++++..   ...|+|.++                        
T Consensus         3 ~~~~~v~~s~~~G~GvfA~~~I~~G~~I~ey~g~vi~~~e~~~~---~~~y~f~~~------------------------   55 (119)
T 1n3j_A            3 NDRVIVKKSPLGGYGVFARKSFEKGELVEECLCIVRHNDDWGTA---LEDYLFSRK------------------------   55 (119)
T ss_dssp             CSSEEEECSCSSCCEEEECCCBCSCEEECCCCCEEECSHHHHHH---SCSEEEEET------------------------
T ss_pred             CCCEEEEECCCceeEEEECCcCCCCCEEEEeeEEEECHHHHhhc---cCCeEEEeC------------------------
Confidence            46899999999999999999999999999999999999888752   356877542                        


Q ss_pred             CCCCCCCcccCCCCceEEeCCCCCceeeeeccCCCCCceEEEEEeccCCCCccEEEEEEcCCCCCCCeeEeecCCCCCCC
Q 024518          163 NSDRPDDQKVENTPDYCIDAGAVGNVARFINHSCEPNLFVQCVLSSHHDLKLARVVLFAADNIPPLQELTYDYGYELDSV  242 (266)
Q Consensus       163 ~~~~~~~~~~~~~~~~~IDa~~~Gn~~RfiNHSC~PN~~~~~v~~~~~~~~~~~i~~fA~rdI~~GeELT~dYg~~~~~~  242 (266)
                                    .   |+...+|.+|||||||+||+.+..+      ....++.++|+|||++|||||+||+..+|..
T Consensus        56 --------------~---d~~~~~~~~~~~NHsc~pN~~~~~~------~~~~~~~~~A~rdI~~GeElt~~Y~~~~~~~  112 (119)
T 1n3j_A           56 --------------N---MSAMALGFGAIFNHSKDPNARHELT------AGLKRMRIFTIKPIAIGEEITISYGDDYWLS  112 (119)
T ss_dssp             --------------T---EEEEESSSHHHHHSCSSCCCEEEEC------SSSSCEEEEECSCBCSSEEECCCCCCCCCCC
T ss_pred             --------------C---ccccccCceeeeccCCCCCeeEEEE------CCCeEEEEEEccccCCCCEEEEecCchhhcC
Confidence                          1   6677899999999999999987642      2357999999999999999999999999865


Q ss_pred             C
Q 024518          243 H  243 (266)
Q Consensus       243 ~  243 (266)
                      .
T Consensus       113 r  113 (119)
T 1n3j_A          113 R  113 (119)
T ss_dssp             C
T ss_pred             c
Confidence            3


No 13 
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=99.97  E-value=5.6e-31  Score=208.17  Aligned_cols=122  Identities=22%  Similarity=0.327  Sum_probs=99.5

Q ss_pred             CCCcccccCCcccEEEEEeC--CCceeEEeCCCCCCCCeEEEeeeEEeChhhhhhhccCCCceEEecchhhhhccCCCce
Q 024518           73 CINRTSQRGLKYRLEVYRTP--KKGWAVRSWDFIPAGAPVCEYIGVLRRTEDLDNACDNENNFIFDIDCLQTMRGLGGRE  150 (266)
Q Consensus        73 C~Nr~~q~~~~~~l~v~~t~--~kG~Gv~a~~~I~~G~~I~ey~Gevi~~~e~~~~~~~~~~y~~~l~~~~~~~~~~~~~  150 (266)
                      +++|++ ++++..|+|.++.  ++||||||+++|++|++|++|.|++++.+++.     ...|+|.++...         
T Consensus        19 ~~~~~~-~~lp~~l~l~~S~i~~~G~GVfA~~~I~kG~~~gey~Ge~i~~~e~~-----~~~Y~f~i~~~~---------   83 (149)
T 2qpw_A           19 VPEHVL-RGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFVGDKKKRSQVK-----NNVYMWEVYYPN---------   83 (149)
T ss_dssp             SCHHHH-HTCCTTEEEEECSSCTTSEEEEESSCBCTTCEECCCCCEEECGGGCC-----CSSSEEEEEETT---------
T ss_pred             hhHHHH-hCCCCCeEEEEcCCCCCceEEEECCccCCCCEEEEEeCEEcCHHHhc-----cCceEEEEecCC---------
Confidence            455544 4567889999985  58999999999999999999999999887654     367998774210         


Q ss_pred             eecccccceeecCCCCCCCcccCCCCceEEeCCC--CCceeeeeccCCCC---CceEEEEEeccCCCCccEEEEEEcCCC
Q 024518          151 RRLRDVSISTIYNSDRPDDQKVENTPDYCIDAGA--VGNVARFINHSCEP---NLFVQCVLSSHHDLKLARVVLFAADNI  225 (266)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IDa~~--~Gn~~RfiNHSC~P---N~~~~~v~~~~~~~~~~~i~~fA~rdI  225 (266)
                                              ...++|||+.  .||++|||||||+|   |+.....        ..+|.|||+|||
T Consensus        84 ------------------------~~~~~IDa~~~~~gn~~RfINhSc~p~eqNl~~~~~--------~~~I~~~A~RdI  131 (149)
T 2qpw_A           84 ------------------------LGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLEI--------NRAIYYKTLKPI  131 (149)
T ss_dssp             ------------------------TEEEEEECSSGGGSCGGGGCEECBTTBTCCEEEEEE--------TTEEEEEESSCB
T ss_pred             ------------------------CeeEEEeCCCCCCCcceeeeeccCChhhcCEEEEEE--------CCEEEEEEccCC
Confidence                                    0027899998  99999999999999   8876421        259999999999


Q ss_pred             CCCCeeEeecCCCCCC
Q 024518          226 PPLQELTYDYGYELDS  241 (266)
Q Consensus       226 ~~GeELT~dYg~~~~~  241 (266)
                      ++|||||+||+..+++
T Consensus       132 ~~GEEL~~dY~~~~~~  147 (149)
T 2qpw_A          132 APGEELLVWYNGEDNP  147 (149)
T ss_dssp             CTTCBCEECCCCCCCC
T ss_pred             CCCCEEEEccCCccCC
Confidence            9999999999988764


No 14 
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=99.96  E-value=2.3e-29  Score=221.09  Aligned_cols=117  Identities=20%  Similarity=0.204  Sum_probs=96.2

Q ss_pred             cccEEEEEeCC--CceeEEeCCCCCCCCeEEEeeeEEeChhhhhhhccCCCceEEecchhhhhccCCCceeeccccccee
Q 024518           83 KYRLEVYRTPK--KGWAVRSWDFIPAGAPVCEYIGVLRRTEDLDNACDNENNFIFDIDCLQTMRGLGGRERRLRDVSIST  160 (266)
Q Consensus        83 ~~~l~v~~t~~--kG~Gv~a~~~I~~G~~I~ey~Gevi~~~e~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~  160 (266)
                      ...++|.+++.  |||||||+++|++|++|+||+||+++.++++.+......|.|.++.                     
T Consensus       162 ~~~~~v~~S~i~GkG~Gvfa~~~I~~G~~I~ey~Ge~i~~~~~~~r~~~~~~~~~~l~~---------------------  220 (293)
T 1h3i_A          162 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALNGNTLSLDE---------------------  220 (293)
T ss_dssp             HTTEEEEECSSSSSSEEEEESSCBCTTCEEEEECCEEECHHHHHHSCGGGCTTEEECSS---------------------
T ss_pred             ceeEEEeeeecCCCcceEEECCcCCCCCEEEEeccEEcCHHHHhHHhhhcccCEEecCC---------------------
Confidence            36799999875  5599999999999999999999999999998765433455554421                     


Q ss_pred             ecCCCCCCCcccCCCCceEEeC--------CCCCceeeeeccCCCCCceEEEEEeccCCCCccE-EEEEEcCCCCCCCee
Q 024518          161 IYNSDRPDDQKVENTPDYCIDA--------GAVGNVARFINHSCEPNLFVQCVLSSHHDLKLAR-VVLFAADNIPPLQEL  231 (266)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~IDa--------~~~Gn~~RfiNHSC~PN~~~~~v~~~~~~~~~~~-i~~fA~rdI~~GeEL  231 (266)
                                      .++|||        +..||+||||||||+||+.++.|..    +...+ ++|||+|||++||||
T Consensus       221 ----------------~~~iDa~~~~~~~~~~~gn~ar~iNHsc~pN~~~~~~~~----~~~~~~~~~~a~r~I~~geEl  280 (293)
T 1h3i_A          221 ----------------ETVIDVPEPYNHVSKYCASLGHKANHSFTPNCIYDMFVH----PRFGPIKCIRTLRAVEADEEL  280 (293)
T ss_dssp             ----------------SCEEECCTTTTSTTTCCSCCGGGSEEESSCSEEEEEEEE----TTTEEEEEEEESSCBCTTCEE
T ss_pred             ----------------CEEEeCcccccccceeeccceeeeccCCCCCeEEEEEEc----CCCCcEEEEEECCccCCCCEE
Confidence                            378999        7799999999999999999987633    33345 599999999999999


Q ss_pred             EeecCCCCC
Q 024518          232 TYDYGYELD  240 (266)
Q Consensus       232 T~dYg~~~~  240 (266)
                      ||||+++..
T Consensus       281 t~~Yg~~~~  289 (293)
T 1h3i_A          281 TVAYGYDHS  289 (293)
T ss_dssp             EEEEETTBC
T ss_pred             EEecCCCCC
Confidence            999998764


No 15 
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=99.96  E-value=3.4e-30  Score=220.98  Aligned_cols=130  Identities=19%  Similarity=0.222  Sum_probs=96.2

Q ss_pred             ccEEEEEe-----CCCceeEEeCCCCCCCCeEEEeeeEEeChhhhhhhc--c-CCCceEEecchhhhhccCCCceeeccc
Q 024518           84 YRLEVYRT-----PKKGWAVRSWDFIPAGAPVCEYIGVLRRTEDLDNAC--D-NENNFIFDIDCLQTMRGLGGRERRLRD  155 (266)
Q Consensus        84 ~~l~v~~t-----~~kG~Gv~a~~~I~~G~~I~ey~Gevi~~~e~~~~~--~-~~~~y~~~l~~~~~~~~~~~~~~~~~~  155 (266)
                      -+++|..+     +.+||||||+++|++|++|+||.|+++...+++...  . ..+.|.++..                 
T Consensus       131 ~gfeV~~~~ry~~e~~G~GlfA~~~I~kGe~I~EY~Geii~~~e~ee~~~~~~~~~dF~i~~s-----------------  193 (273)
T 3s8p_A          131 SGFEILPCNRYSSEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEENMLLRHGENDFSVMYS-----------------  193 (273)
T ss_dssp             GCEEEEEECCCTTCSSEEEEEESSCBCTTCEEEEEEEEEEEECHHHHHHHCCTTTSCTTEEEE-----------------
T ss_pred             CCceEEeccceeecCCCceEEECCccCCCCEEEEEEEEEccccHHHHHHHhhhcccccceecc-----------------
Confidence            45666655     459999999999999999999999998665554221  0 0111111110                 


Q ss_pred             ccceeecCCCCCCCcccCCCCceEEeCCCCCceeeeeccCCCCCceEEEEEeccCCCCccEEEEEEcCCCCCCCeeEeec
Q 024518          156 VSISTIYNSDRPDDQKVENTPDYCIDAGAVGNVARFINHSCEPNLFVQCVLSSHHDLKLARVVLFAADNIPPLQELTYDY  235 (266)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~IDa~~~Gn~~RfiNHSC~PN~~~~~v~~~~~~~~~~~i~~fA~rdI~~GeELT~dY  235 (266)
                                           ....++..+||.+|||||||+||+.+.  +.+     ..+|.|+|+|||++|||||+||
T Consensus       194 ---------------------~~~~~a~~~g~~arfiNHSC~PN~~~~--~~~-----~~~i~i~A~RdI~~GEELt~~Y  245 (273)
T 3s8p_A          194 ---------------------TRKNCAQLWLGPAAFINHDCRPNCKFV--STG-----RDTACVKALRDIEPGEEISCYY  245 (273)
T ss_dssp             ---------------------TTTTEEEEEESGGGGCEECSSCSEEEE--EEE-----TTEEEEEESSCBCTTCBCEECC
T ss_pred             ---------------------ccccccceecchHHhhCCCCCCCeEEE--EcC-----CCEEEEEECceeCCCCEEEEec
Confidence                                 011246778999999999999999764  222     2589999999999999999999


Q ss_pred             CCCCCCCCCCCCCccCeeeeeCCCCccccc
Q 024518          236 GYELDSVHGPDGKVKQMVCYCGAEGCRGRL  265 (266)
Q Consensus       236 g~~~~~~~~~~~~~~~~~C~Cgs~~Crg~l  265 (266)
                      +..+|..       ..+.|.||+.+|+|+.
T Consensus       246 ~~~~~~~-------~~f~C~C~~c~crG~g  268 (273)
T 3s8p_A          246 GDGFFGE-------NNEFCECYTCERRGTG  268 (273)
T ss_dssp             CTTTTSG-------GGTTCCCHHHHHHTCG
T ss_pred             CchhcCC-------CCeEEECCCCcCCCCC
Confidence            9988753       2478999999999975


No 16 
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=99.93  E-value=3.1e-27  Score=200.59  Aligned_cols=122  Identities=20%  Similarity=0.205  Sum_probs=88.2

Q ss_pred             ccEEEEEe-----CCCceeEEeCCCCCCCCeEEEeeeEEeChhhhhhhcc--CCCceEEecchhhhhccCCCceeecccc
Q 024518           84 YRLEVYRT-----PKKGWAVRSWDFIPAGAPVCEYIGVLRRTEDLDNACD--NENNFIFDIDCLQTMRGLGGRERRLRDV  156 (266)
Q Consensus        84 ~~l~v~~t-----~~kG~Gv~a~~~I~~G~~I~ey~Gevi~~~e~~~~~~--~~~~y~~~l~~~~~~~~~~~~~~~~~~~  156 (266)
                      -.++|..+     ..+||||||+++|++|++|.+|.|+++...+++....  ..+.|.+..+                  
T Consensus       103 ~g~eV~~~~Ry~~~~~G~Gv~A~~~I~kGE~I~ey~Geli~~t~~e~~~~~~~~n~f~i~~~------------------  164 (247)
T 3rq4_A          103 SGFTILPCTRYSMETNGAKIVSTRAWKKNEKLELLVGCIAELREADEGLLRAGENDFSIMYS------------------  164 (247)
T ss_dssp             GCEEEEECCCCTTCSSCEEEEESSCBCTTCEEEEEEEEEEECCGGGGGGCCTTTSCTTEEEE------------------
T ss_pred             CCcEEEeeeeeeecCCcceEEeCCccCCCCEEEEEEeEEEeCcHHHHHhhhccCCcEEEEec------------------
Confidence            45667654     4689999999999999999999999986555443211  0111111000                  


Q ss_pred             cceeecCCCCCCCcccCCCCceEEeCCCCCceeeeeccCCCCCceEEEEEeccCCCCccEEEEEEcCCCCCCCeeEeecC
Q 024518          157 SISTIYNSDRPDDQKVENTPDYCIDAGAVGNVARFINHSCEPNLFVQCVLSSHHDLKLARVVLFAADNIPPLQELTYDYG  236 (266)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~IDa~~~Gn~~RfiNHSC~PN~~~~~v~~~~~~~~~~~i~~fA~rdI~~GeELT~dYg  236 (266)
                                          ...+++..+||.+|||||||.||+.+..+  +     ..++.|+|+|||++|||||+||+
T Consensus       165 --------------------~~~~~~~l~~~~ar~iNHSC~PN~~~~~~--~-----~~~i~v~A~rdI~~GEElt~~Y~  217 (247)
T 3rq4_A          165 --------------------TRKRSAQLWLGPAAFINHDCKPNCKFVPA--D-----GNAACVKVLRDIEPGDEVTCFYG  217 (247)
T ss_dssp             --------------------TTTTEEEEEESGGGGCEECSSCSEEEEEE--T-----TTEEEEEESSCBCTTCBCEECCC
T ss_pred             --------------------CCcccceeecchhhhcCCCCCCCEEEEEe--C-----CCEEEEEECCcCCCCCEEEEecC
Confidence                                01135666789999999999999976533  2     25999999999999999999999


Q ss_pred             CCCCCCCCCCCCccCeeeeeC
Q 024518          237 YELDSVHGPDGKVKQMVCYCG  257 (266)
Q Consensus       237 ~~~~~~~~~~~~~~~~~C~Cg  257 (266)
                      ..+|..       ..+.|.|+
T Consensus       218 ~~~~~~-------~~f~C~C~  231 (247)
T 3rq4_A          218 EGFFGE-------KNEHCECH  231 (247)
T ss_dssp             TTSSSG-------GGTTCCCH
T ss_pred             chhcCC-------CCCEEECC
Confidence            998753       34678886


No 17 
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=99.90  E-value=1.9e-23  Score=167.88  Aligned_cols=120  Identities=24%  Similarity=0.294  Sum_probs=83.1

Q ss_pred             CCcccEEEEEeC--CCceeEEeCCCCCCCCeEEEeeeEEeChhhhhhhccCCCceEEecchhhhhccCCCceeecccccc
Q 024518           81 GLKYRLEVYRTP--KKGWAVRSWDFIPAGAPVCEYIGVLRRTEDLDNACDNENNFIFDIDCLQTMRGLGGRERRLRDVSI  158 (266)
Q Consensus        81 ~~~~~l~v~~t~--~kG~Gv~a~~~I~~G~~I~ey~Gevi~~~e~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~  158 (266)
                      .+...|+|.++.  ++|+||||+++||+|+++++|.|++++.+++....  ...|+|.+....              .  
T Consensus        24 sLP~~l~l~~S~i~~~G~GVfA~~~IpkGt~fGpY~Ge~i~~~ea~~~~--~~~y~w~i~~~~--------------G--   85 (170)
T 3ep0_A           24 VLPAEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDICK--NNNLMWEVFNED--------------G--   85 (170)
T ss_dssp             SCCTTEEEEECSSSSCSEEEEESSCBCTTCEEEEECCEEECC------------CEEEEECTT--------------S--
T ss_pred             CCCCCeEEEEcCCCCCceEEEECcccCCCCEEEecCceecCHHHhcccc--CCceEEEEecCC--------------C--
Confidence            455779999884  56999999999999999999999999998876432  367888763100              0  


Q ss_pred             eeecCCCCCCCcccCCCCceEEeCCC--CCceeeeeccCCC---CCceEEEEEeccCCCCccEEEEEEcCCCCCCCeeEe
Q 024518          159 STIYNSDRPDDQKVENTPDYCIDAGA--VGNVARFINHSCE---PNLFVQCVLSSHHDLKLARVVLFAADNIPPLQELTY  233 (266)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~IDa~~--~Gn~~RfiNHSC~---PN~~~~~v~~~~~~~~~~~i~~fA~rdI~~GeELT~  233 (266)
                                      ...++||++.  .||++|||||||.   +|+....+        ..+|.|+|+|||.|||||++
T Consensus        86 ----------------~~~~~IDa~~e~~~NWmR~Vn~A~~~~eqNl~a~q~--------~~~I~~~a~RdI~pGeELlv  141 (170)
T 3ep0_A           86 ----------------TVRYFIDASQEDHRSWMTYIKCARNEQEQNLEVVQI--------GTSIFYKAIEMIPPDQELLV  141 (170)
T ss_dssp             ----------------SEEEEEECC------GGGGCEECSSTTTCCEEEEEE--------TTEEEEEESSCBCTTCBCEE
T ss_pred             ----------------cEEEEEECCCCCCcceeeeEEecCCcccCCeeeEEE--------CCEEEEEECcCcCCCCEEEE
Confidence                            0027899998  8999999999996   78765432        25999999999999999999


Q ss_pred             ecCCCCCCC
Q 024518          234 DYGYELDSV  242 (266)
Q Consensus       234 dYg~~~~~~  242 (266)
                      +|+..|...
T Consensus       142 wYg~~y~~~  150 (170)
T 3ep0_A          142 WYGNSHNTF  150 (170)
T ss_dssp             EECC-----
T ss_pred             eeCHHHHHH
Confidence            999988653


No 18 
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=99.88  E-value=7.3e-23  Score=162.21  Aligned_cols=120  Identities=19%  Similarity=0.254  Sum_probs=82.6

Q ss_pred             CcccEEEEEe-CCCceeEEeCCCCCCCCeEEEeeeEEeChhhhhhhccCCCceEEecchhhhhccCCCceeeccccccee
Q 024518           82 LKYRLEVYRT-PKKGWAVRSWDFIPAGAPVCEYIGVLRRTEDLDNACDNENNFIFDIDCLQTMRGLGGRERRLRDVSIST  160 (266)
Q Consensus        82 ~~~~l~v~~t-~~kG~Gv~a~~~I~~G~~I~ey~Gevi~~~e~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~  160 (266)
                      +...|+|..+ +++|+||||++.|++|+.+++|.|++++.+++..+.+.+..|+|.+....                   
T Consensus        21 lP~~l~l~~S~~~~g~GVfa~~~Ip~G~~fGPy~Ge~~~~~e~~~~~~~~~~y~w~i~~~~-------------------   81 (151)
T 3db5_A           21 LPKQLVLRQSIVGAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYHNG-------------------   81 (151)
T ss_dssp             CCTTEEEEECC---CEEEEESSCBCTTCEECCCCCEEEC-----------CCSEEEEEETT-------------------
T ss_pred             CCCCeEEEEccCCCceEEEEecccCCCCEEEEeccEEeCHHHhhcccccCCCceEEEEeCC-------------------
Confidence            4466888875 46899999999999999999999999999888654333356777542100                   


Q ss_pred             ecCCCCCCCcccCCCCceEEeCCC--CCceeeeeccCCCC---CceEEEEEeccCCCCccEEEEEEcCCCCCCCeeEeec
Q 024518          161 IYNSDRPDDQKVENTPDYCIDAGA--VGNVARFINHSCEP---NLFVQCVLSSHHDLKLARVVLFAADNIPPLQELTYDY  235 (266)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~IDa~~--~Gn~~RfiNHSC~P---N~~~~~v~~~~~~~~~~~i~~fA~rdI~~GeELT~dY  235 (266)
                                    ...++||++.  .||++|||||||.+   |+.....        ..+|.|+|+|||.+||||+++|
T Consensus        82 --------------~~~~~iD~~~~~~~NWmR~Vn~A~~~~eqNl~a~q~--------~~~I~~~a~rdI~pGeELlv~Y  139 (151)
T 3db5_A           82 --------------VLEFCIITTDENECNWMMFVRKARNREEQNLVAYPH--------DGKIFFCTSQDIPPENELLFYY  139 (151)
T ss_dssp             --------------EEEEEEECCCTTTSCGGGGCEECSSTTTCCEEEEEE--------TTEEEEEESSCBCTTCBCEEEE
T ss_pred             --------------CEEEEEECcCCCCCcceeEEEecCCcccCceEEEEE--------CCEEEEEEccccCCCCEEEEec
Confidence                          0026899987  59999999999965   8876432        2589999999999999999999


Q ss_pred             CCCCCCC
Q 024518          236 GYELDSV  242 (266)
Q Consensus       236 g~~~~~~  242 (266)
                      +.+|+..
T Consensus       140 g~~y~~~  146 (151)
T 3db5_A          140 SRDYAQQ  146 (151)
T ss_dssp             CC-----
T ss_pred             CHHHHHH
Confidence            9998753


No 19 
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=99.86  E-value=1.8e-22  Score=165.35  Aligned_cols=117  Identities=20%  Similarity=0.233  Sum_probs=92.0

Q ss_pred             CcccEEEEEeC--CCceeEEeCCCCCCCCeEEEeeeEEeChhhhhhhccCCCceEEecchhhhhccCCCceeecccccce
Q 024518           82 LKYRLEVYRTP--KKGWAVRSWDFIPAGAPVCEYIGVLRRTEDLDNACDNENNFIFDIDCLQTMRGLGGRERRLRDVSIS  159 (266)
Q Consensus        82 ~~~~l~v~~t~--~kG~Gv~a~~~I~~G~~I~ey~Gevi~~~e~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~  159 (266)
                      +...|.|..+.  .+|+||||++.||+|+.+++|.|++++.+++....  ...|+|.+....                  
T Consensus        56 LP~~L~lr~S~i~~~G~GVfa~~~IpkGt~fGPY~Ge~~~~~e~~~~~--~~~y~w~i~~~g------------------  115 (196)
T 3dal_A           56 LPRNLLFKYATNSEEVIGVMSKEYIPKGTRFGPLIGEIYTNDTVPKNA--NRKYFWRIYSRG------------------  115 (196)
T ss_dssp             CCTTEEEEECTTSCCEEEEEESSCBCTTEEECCCCCEEECTTTCC-----CCTTEEEEEETT------------------
T ss_pred             CCCCeEEEECCCCCceeEEEEccccCCCCEEEeccceEcCHHHhhhcc--CCcceeeeccCC------------------
Confidence            44678888885  49999999999999999999999999988764322  256877652100                  


Q ss_pred             eecCCCCCCCcccCCCCceEEeCCC--CCceeeeeccCCC---CCceEEEEEeccCCCCccEEEEEEcCCCCCCCeeEee
Q 024518          160 TIYNSDRPDDQKVENTPDYCIDAGA--VGNVARFINHSCE---PNLFVQCVLSSHHDLKLARVVLFAADNIPPLQELTYD  234 (266)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~IDa~~--~Gn~~RfiNHSC~---PN~~~~~v~~~~~~~~~~~i~~fA~rdI~~GeELT~d  234 (266)
                                     ...++||++.  .||++|||||||.   +|+.....        ..+|.|+|+|||.|||||+++
T Consensus       116 ---------------~~~~~IDas~e~~gNWmRfVn~A~~~~eqNl~a~q~--------~~~I~y~a~RdI~pGeELlvw  172 (196)
T 3dal_A          116 ---------------ELHHFIDGFNEEKSNWMRYVNPAHSPREQNLAACQN--------GMNIYFYTIKPIPANQELLVW  172 (196)
T ss_dssp             ---------------EEEEEEECCCTTSSCGGGGCEECSSTTTCCEEEEEE--------TTEEEEEESSCBCTTCBCEEE
T ss_pred             ---------------CEEEEEECCCCCCCceEEeEEecCCcccCCcEEEEE--------CCEEEEEECcccCCCCEEEEe
Confidence                           0027899987  8999999999996   68766432        269999999999999999999


Q ss_pred             cCCCCCC
Q 024518          235 YGYELDS  241 (266)
Q Consensus       235 Yg~~~~~  241 (266)
                      |+.+|+.
T Consensus       173 Yg~~Y~~  179 (196)
T 3dal_A          173 YCRDFAE  179 (196)
T ss_dssp             ECHHHHH
T ss_pred             cCHHHHH
Confidence            9987753


No 20 
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=99.78  E-value=2.3e-19  Score=150.03  Aligned_cols=112  Identities=22%  Similarity=0.205  Sum_probs=87.2

Q ss_pred             cccEEEEEeCCCceeEEeC-CCCCCCCeEEEeeeEEeChhhhhhhccCCCceEEecchhhhhccCCCceeecccccceee
Q 024518           83 KYRLEVYRTPKKGWAVRSW-DFIPAGAPVCEYIGVLRRTEDLDNACDNENNFIFDIDCLQTMRGLGGRERRLRDVSISTI  161 (266)
Q Consensus        83 ~~~l~v~~t~~kG~Gv~a~-~~I~~G~~I~ey~Gevi~~~e~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
                      ...|+|.++...|+||++. +.|++|+.+++|.|++++..+++      ..|+|.+....                    
T Consensus        71 P~~L~vr~S~i~~~Gv~~~~~~IpkGt~fGPY~Ge~~s~~ea~------~~y~wei~~~~--------------------  124 (237)
T 3ray_A           71 PQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKSA------GFFSWLIVDKN--------------------  124 (237)
T ss_dssp             CTTEEEEECTTSCEEEEECSSCBCTTEEECCCCSEEECC-----------CCEEEEECTT--------------------
T ss_pred             CCCeEEEEcCCCCcceEEEeCcCCCCCEEEecccEEcChHHcc------ccceEEEEcCC--------------------
Confidence            3569999999899999987 89999999999999999876653      45776552100                    


Q ss_pred             cCCCCCCCcccCCCCceEEeCCC--CCceeeeeccCCC---CCceEEEEEeccCCCCccEEEEEEcCCCCCCCeeEeecC
Q 024518          162 YNSDRPDDQKVENTPDYCIDAGA--VGNVARFINHSCE---PNLFVQCVLSSHHDLKLARVVLFAADNIPPLQELTYDYG  236 (266)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~IDa~~--~Gn~~RfiNHSC~---PN~~~~~v~~~~~~~~~~~i~~fA~rdI~~GeELT~dYg  236 (266)
                                   ....+||+..  .||++|||||+|.   +|+.+...        ..+|.|+|+|||.+||||+++|+
T Consensus       125 -------------g~~~~IDgsde~~gNWmRfVn~Ar~~~EqNL~A~q~--------~~~Iyy~a~RdI~pGeELlVwYg  183 (237)
T 3ray_A          125 -------------NRYKSIDGSDETKANWMRYVVISREEREQNLLAFQH--------SERIYFRACRDIRPGEWLRVWYS  183 (237)
T ss_dssp             -------------SCEEEEECCCTTTSCGGGGCEECCCTTTCCEEEEEE--------TTEEEEEESSCBCTTCBCEEEEC
T ss_pred             -------------CcEEEEecCCCCCCcceeEEEcCCCcccccceeEEe--------CCEEEEEEccccCCCCEEEEeeC
Confidence                         0126899997  7999999999996   57665432        25999999999999999999999


Q ss_pred             CCCCC
Q 024518          237 YELDS  241 (266)
Q Consensus       237 ~~~~~  241 (266)
                      ..|+.
T Consensus       184 ~~Y~~  188 (237)
T 3ray_A          184 EDYMK  188 (237)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88753


No 21 
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=99.69  E-value=7.7e-18  Score=133.09  Aligned_cols=117  Identities=18%  Similarity=0.103  Sum_probs=81.1

Q ss_pred             ccEEEEEeCCCceeEEeCCCCCCCCeEEEeeeEEeChhhhhhhccCCCceEEecchhhhhccCCCceeecccccceeecC
Q 024518           84 YRLEVYRTPKKGWAVRSWDFIPAGAPVCEYIGVLRRTEDLDNACDNENNFIFDIDCLQTMRGLGGRERRLRDVSISTIYN  163 (266)
Q Consensus        84 ~~l~v~~t~~kG~Gv~a~~~I~~G~~I~ey~Gevi~~~e~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (266)
                      ..|+|.   ..|+||||++.|++|+.+++|.|++++.+++..     ..|.+.+...              +.       
T Consensus        23 ~~L~i~---~~g~GVfA~~~IpkGt~fGPy~Ge~~~~~e~~~-----~~~~~~v~~~--------------d~-------   73 (152)
T 3ihx_A           23 LVLYID---RFLGGVFSKRRIPKRTQFGPVEGPLVRGSELKD-----CYIHLKVSLD--------------KG-------   73 (152)
T ss_dssp             TTEEEC---TTTCSEEESSCBCSSCEECCCCSCEECSTTCCS-----SSCCCBC--------------------------
T ss_pred             cceEEe---ecCCeEEECceecCCCEEEeeccEEcCHHHhcc-----CcceEEEEcc--------------cc-------
Confidence            456664   358999999999999999999999999876531     2232221100              00       


Q ss_pred             CCCCCCcccCCCCceEEeCCC--CCceeeeeccCCC---CCceEEEEEeccCCCCccEEEEEEcCCCCCCCeeEeecCCC
Q 024518          164 SDRPDDQKVENTPDYCIDAGA--VGNVARFINHSCE---PNLFVQCVLSSHHDLKLARVVLFAADNIPPLQELTYDYGYE  238 (266)
Q Consensus       164 ~~~~~~~~~~~~~~~~IDa~~--~Gn~~RfiNHSC~---PN~~~~~v~~~~~~~~~~~i~~fA~rdI~~GeELT~dYg~~  238 (266)
                        ..+  .......++||++.  .||++|||||+|.   +|+....   .     ..+|.+.|+|||.+||||+++|+.+
T Consensus        74 --~~~--~~~~~~~~~iD~~~~~~~NWmr~vn~a~~~~eqNl~a~q---~-----~~~I~~~~~r~I~pGeELlv~Y~~~  141 (152)
T 3ihx_A           74 --DRK--ERDLHEDLWFELSDETLCNWMMFVRPAQNHLEQNLVAYQ---Y-----GHHVYYTTIKNVEPKQELKVWYAAS  141 (152)
T ss_dssp             --------------CEECCCCTTTSCGGGGCCBCCSTTTCCEEEEE---C-----SSSEEEEESSCBCTTCBCCEEECHH
T ss_pred             --ccc--cccCCccEEEEccCCCCCcceeeeeccCCccCCCcEEEE---e-----CCeEEEEEeeecCCCCEEEEechHH
Confidence              000  00001137899987  5999999999997   6776542   1     2589999999999999999999987


Q ss_pred             CCC
Q 024518          239 LDS  241 (266)
Q Consensus       239 ~~~  241 (266)
                      |..
T Consensus       142 y~~  144 (152)
T 3ihx_A          142 YAE  144 (152)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            643


No 22 
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.00  E-value=4.9e-11  Score=111.34  Aligned_cols=50  Identities=30%  Similarity=0.316  Sum_probs=37.9

Q ss_pred             eeeeccCCCCCceEEEEEeccCC-------CCccEEEEEEcCCCCCCCeeEeecCCCCC
Q 024518          189 ARFINHSCEPNLFVQCVLSSHHD-------LKLARVVLFAADNIPPLQELTYDYGYELD  240 (266)
Q Consensus       189 ~RfiNHSC~PN~~~~~v~~~~~~-------~~~~~i~~fA~rdI~~GeELT~dYg~~~~  240 (266)
                      +.||||||.||+.+..  .+...       ....++.|+|+|||++||||||+|....+
T Consensus       201 ~s~~NHSC~PN~~~~~--~~~~~~~~~~~~~~~~~~~v~A~rdI~~GEEltisY~~~~~  257 (490)
T 3n71_A          201 LGLVNHDCWPNCTVIF--NNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFLH  257 (490)
T ss_dssp             GGGCEECSSCSEEEEE--ECCCCSSSCCCGGGSCEEEEEESSCBCTTCBCEECSSCSCS
T ss_pred             hhhcccCCCCCeeEEe--cCCccccccccccccceEEEEECCCCCCCCEEEEeecCCCC
Confidence            4679999999998653  22210       01239999999999999999999997654


No 23 
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.96  E-value=2.5e-10  Score=104.87  Aligned_cols=45  Identities=31%  Similarity=0.412  Sum_probs=37.7

Q ss_pred             eeeeeccCCCCCceEEEEEeccCCCCccEEEEEEcCCCCCCCeeEeecCCCCC
Q 024518          188 VARFINHSCEPNLFVQCVLSSHHDLKLARVVLFAADNIPPLQELTYDYGYELD  240 (266)
Q Consensus       188 ~~RfiNHSC~PN~~~~~v~~~~~~~~~~~i~~fA~rdI~~GeELT~dYg~~~~  240 (266)
                      .++||||||.||+.+.  +.+      .++.|+|+|||++|||||++|....+
T Consensus       201 ~~s~~NHsC~PN~~~~--~~~------~~~~~~a~r~I~~GeEl~isY~~~~~  245 (429)
T 3qwp_A          201 SISLLNHSCDPNCSIV--FNG------PHLLLRAVRDIEVGEELTICYLDMLM  245 (429)
T ss_dssp             TGGGCEECSSCSEEEE--EET------TEEEEEECSCBCTTCEEEECCSCSSC
T ss_pred             hhHhhCcCCCCCeEEE--EeC------CEEEEEEeeeECCCCEEEEEecCCCC
Confidence            4678999999999765  222      47999999999999999999987654


No 24 
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.89  E-value=2.6e-10  Score=104.85  Aligned_cols=60  Identities=25%  Similarity=0.383  Sum_probs=43.1

Q ss_pred             eeeeccCCCCCceEEEEEeccCCCCccEEEEEEcCCCCCCCeeEeecCCCCCCCCCCCC---CccCeeeee
Q 024518          189 ARFINHSCEPNLFVQCVLSSHHDLKLARVVLFAADNIPPLQELTYDYGYELDSVHGPDG---KVKQMVCYC  256 (266)
Q Consensus       189 ~RfiNHSC~PN~~~~~v~~~~~~~~~~~i~~fA~rdI~~GeELT~dYg~~~~~~~~~~~---~~~~~~C~C  256 (266)
                      +.+|||||.||+.+.  +.+      ..+.|+|+|||++|||||++|+...+....+..   ....|.|.|
T Consensus       202 ~s~~NHsC~PN~~~~--~~~------~~~~~~a~r~I~~Geel~i~Y~~~~~~~~~R~~~L~~~~~F~C~C  264 (433)
T 3qww_A          202 VALMNHSCCPNVIVT--YKG------TLAEVRAVQEIHPGDEVFTSYIDLLYPTEDRNDRLRDSYFFTCEC  264 (433)
T ss_dssp             GGGSEECSSCSEEEE--EET------TEEEEEESSCBCTTCEEEECCSCTTSCHHHHHHHHHHHHSCCCCS
T ss_pred             ccccCCCCCCCceEE--EcC------CEEEEEeccCcCCCCEEEEeecCCcCCHHHHHHHHhCcCCEEeEC
Confidence            457999999998764  322      378999999999999999999986543211100   123578888


No 25 
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=97.46  E-value=8.5e-05  Score=68.33  Aligned_cols=41  Identities=27%  Similarity=0.350  Sum_probs=33.8

Q ss_pred             eeeeccCCCCCceEEEEEeccCCCCccEEEEEEcCCCCCCCeeEeecCC
Q 024518          189 ARFINHSCEPNLFVQCVLSSHHDLKLARVVLFAADNIPPLQELTYDYGY  237 (266)
Q Consensus       189 ~RfiNHSC~PN~~~~~v~~~~~~~~~~~i~~fA~rdI~~GeELT~dYg~  237 (266)
                      +-++||||.||+.+.   .+.     ..+.++|.|+|++||||+++||.
T Consensus       223 ~D~~NH~~~~~~~~~---~~~-----~~~~~~a~~~i~~Geei~~~YG~  263 (449)
T 3qxy_A          223 ADILNHLANHNANLE---YSA-----NCLRMVATQPIPKGHEIFNTYGQ  263 (449)
T ss_dssp             GGGCEECSSCSEEEE---ECS-----SEEEEEESSCBCTTCEEEECCSS
T ss_pred             HHHhcCCCCCCeEEE---EeC-----CeEEEEECCCcCCCchhhccCCC
Confidence            457899999998653   221     37899999999999999999996


No 26 
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=97.10  E-value=0.00026  Score=64.82  Aligned_cols=51  Identities=14%  Similarity=-0.024  Sum_probs=33.7

Q ss_pred             eeeeeccCCCCCceEEEEEecc---CCCCccEEEEEEcCCCCCCCeeEeecCCC
Q 024518          188 VARFINHSCEPNLFVQCVLSSH---HDLKLARVVLFAADNIPPLQELTYDYGYE  238 (266)
Q Consensus       188 ~~RfiNHSC~PN~~~~~v~~~~---~~~~~~~i~~fA~rdI~~GeELT~dYg~~  238 (266)
                      ++=++|||+.||.....+..+.   .......+.+.|.|+|++||||+++||..
T Consensus       189 ~~D~~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~i~~Geei~~sYG~~  242 (440)
T 2h21_A          189 MADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQVYIQYDLN  242 (440)
T ss_dssp             STTSCEECTTCCCCCCEEEC----------CEEEEEESSCBCTTSBCEECSCTT
T ss_pred             chHhhcCCCCcccccceeeecCcccccCCCceEEEEECCCCCCCCEEEEeCCCC
Confidence            3446899999875322222211   00123578999999999999999999964


No 27 
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=96.92  E-value=0.00049  Score=64.01  Aligned_cols=33  Identities=18%  Similarity=0.099  Sum_probs=28.8

Q ss_pred             cEEEEEeCCCceeEEeCCCCCCCCeEEEeeeEE
Q 024518           85 RLEVYRTPKKGWAVRSWDFIPAGAPVCEYIGVL  117 (266)
Q Consensus        85 ~l~v~~t~~kG~Gv~a~~~I~~G~~I~ey~Gev  117 (266)
                      .++|...++.|+||+|+++|++|+.|..-.-.+
T Consensus        94 ~v~i~~~~~~GrGl~A~~dI~~ge~ll~IP~~l  126 (497)
T 3smt_A           94 GFEMVNFKEEGFGLRATRDIKAEELFLWVPRKL  126 (497)
T ss_dssp             TEEEEEETTTEEEEEESSCBCTTCEEEEEEGGG
T ss_pred             ceEEEEcCCCccEEEEcccCCCCCEEEEcCHHH
Confidence            688888899999999999999999998765544


No 28 
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=91.31  E-value=0.17  Score=45.93  Aligned_cols=33  Identities=18%  Similarity=0.176  Sum_probs=29.6

Q ss_pred             ccEEEEEeCCCceeEEeCCCCCCCCeEEEeeeE
Q 024518           84 YRLEVYRTPKKGWAVRSWDFIPAGAPVCEYIGV  116 (266)
Q Consensus        84 ~~l~v~~t~~kG~Gv~a~~~I~~G~~I~ey~Ge  116 (266)
                      ..++++.++.+|.||+|+++|++|+.|..-...
T Consensus         7 ~~ve~~~~~~~GRgl~A~r~i~~Ge~Il~e~P~   39 (433)
T 3qww_A            7 GGLERFCSAGKGRGLRALRPFHVGDLLFSCPAY   39 (433)
T ss_dssp             TTEEEEECTTSCEEEEESSCBCTTCEEEEEECS
T ss_pred             CcEEEeecCCCcCeEEECCCCCCCCEEEecCCc
Confidence            679999999999999999999999999876553


No 29 
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=90.21  E-value=0.28  Score=45.23  Aligned_cols=35  Identities=14%  Similarity=0.083  Sum_probs=31.0

Q ss_pred             cccEEEEEeCCCceeEEeCCCCCCCCeEEEeeeEE
Q 024518           83 KYRLEVYRTPKKGWAVRSWDFIPAGAPVCEYIGVL  117 (266)
Q Consensus        83 ~~~l~v~~t~~kG~Gv~a~~~I~~G~~I~ey~Gev  117 (266)
                      -..++|..++.+|.||+|+++|++|+.|..-...+
T Consensus         6 ~~~v~v~~~~~~GR~lvAtr~i~~Ge~Il~e~P~~   40 (490)
T 3n71_A            6 MENVEVFTSEGKGRGLKATKEFWAADVIFAERAYS   40 (490)
T ss_dssp             CTTEEEEECSSSCEEEEESSCBCTTCEEEEECCSE
T ss_pred             CCceEEEecCCCCceEEeccCCCCCCEEEecCCce
Confidence            36799999999999999999999999998766643


No 30 
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=89.98  E-value=0.29  Score=44.29  Aligned_cols=35  Identities=14%  Similarity=0.216  Sum_probs=30.0

Q ss_pred             cccEEEEEeCCCceeEEeCCCCCCCCeEEEeeeEE
Q 024518           83 KYRLEVYRTPKKGWAVRSWDFIPAGAPVCEYIGVL  117 (266)
Q Consensus        83 ~~~l~v~~t~~kG~Gv~a~~~I~~G~~I~ey~Gev  117 (266)
                      ...++++.++++|.||+|+++|++|+.|..-...+
T Consensus         4 ~~~i~~~~~~~~GR~l~Atr~i~~Ge~Il~e~P~~   38 (429)
T 3qwp_A            4 PLKVEKFATANRGNGLRAVTPLRPGELLFRSDPLA   38 (429)
T ss_dssp             CCSEEEEECSSSSEEEEESSCBCTTCEEEEECCSE
T ss_pred             ccceeecccCCCCCeEEeCCCCCCCCEEEecCCce
Confidence            45788888999999999999999999998755544


No 31 
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=83.70  E-value=0.98  Score=41.73  Aligned_cols=42  Identities=14%  Similarity=0.022  Sum_probs=31.5

Q ss_pred             eeeeccCCCCCceEEEEEeccCCCCccEEEEEEcCCCCCCCeeEeecCC
Q 024518          189 ARFINHSCEPNLFVQCVLSSHHDLKLARVVLFAADNIPPLQELTYDYGY  237 (266)
Q Consensus       189 ~RfiNHSC~PN~~~~~v~~~~~~~~~~~i~~fA~rdI~~GeELT~dYg~  237 (266)
                      +=++||||.|+...   +..    ....+.++|.++|++||||+++||.
T Consensus       273 ~Dm~NH~~~~~~~~---~~~----~~~~~~~~a~~~i~~Geei~isYG~  314 (497)
T 3smt_A          273 WDMCNHTNGLITTG---YNL----EDDRCECVALQDFRAGEQIYIFYGT  314 (497)
T ss_dssp             GGGCEECSCSEEEE---EET----TTTEEEEEESSCBCTTCEEEECCCS
T ss_pred             HHhhcCCCccccee---eec----cCCeEEEEeCCccCCCCEEEEeCCC
Confidence            34689999996321   111    1246889999999999999999986


No 32 
>1rju_V Metallothionein; Cu(I)-thiolate, metal binding protein; 1.44A {Synthetic} SCOP: g.46.1.1 PDB: 1aoo_A 1aqq_A 1aqr_A 1fmy_A
Probab=76.45  E-value=1.2  Score=24.19  Aligned_cols=19  Identities=26%  Similarity=0.959  Sum_probs=12.0

Q ss_pred             CCCcccCCCCCCCCCcccc
Q 024518           13 AIGCDCRGNCLNSHDCSCA   31 (266)
Q Consensus        13 ~~gC~C~~~C~~~~~C~C~   31 (266)
                      +..|+|..+|....+|+|.
T Consensus        17 qkscscptgcnsddkcpcg   35 (36)
T 1rju_V           17 QKSCSCPTGCNSDDKCPCG   35 (36)
T ss_dssp             TTSCCSCTTCCCGGGCCTT
T ss_pred             hhcCCCCCCCCCCCcCCCC
Confidence            4566676667666666663


No 33 
>1wvo_A Sialic acid synthase; antifreeze protein like domain, N-acetylneuraminic acid phosphate synthase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.04  E-value=1.4  Score=29.98  Aligned_cols=19  Identities=32%  Similarity=0.218  Sum_probs=15.9

Q ss_pred             EEEEEEcCCCCCCCeeEee
Q 024518          216 RVVLFAADNIPPLQELTYD  234 (266)
Q Consensus       216 ~i~~fA~rdI~~GeELT~d  234 (266)
                      +-.++|.+||++||-||-+
T Consensus         6 rrslvA~rdI~~Gevit~~   24 (79)
T 1wvo_A            6 SGSVVAKVKIPEGTILTMD   24 (79)
T ss_dssp             CCEEEESSCBCTTCBCCGG
T ss_pred             cEEEEEeCccCCCCCcCHH
Confidence            4468899999999999875


No 34 
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=72.89  E-value=2.4  Score=38.54  Aligned_cols=33  Identities=15%  Similarity=0.222  Sum_probs=26.9

Q ss_pred             cEEEEEe-CCCceeEEeCCCCCCCCeEEEeeeEE
Q 024518           85 RLEVYRT-PKKGWAVRSWDFIPAGAPVCEYIGVL  117 (266)
Q Consensus        85 ~l~v~~t-~~kG~Gv~a~~~I~~G~~I~ey~Gev  117 (266)
                      +++|... +..|+||+|+++|++|+.|..-.-.+
T Consensus        39 ~v~i~~~~~~~G~Gv~A~~dI~~ge~ll~IP~~~   72 (449)
T 3qxy_A           39 KVAVSRQGTVAGYGMVARESVQAGELLFVVPRAA   72 (449)
T ss_dssp             TEEEESSSCSSSSEEEESSCBCTTCEEEEEEGGG
T ss_pred             ceEEEecCCCceEEEEECCCCCCCCEEEEeCcHH
Confidence            5777764 46899999999999999998866554


No 35 
>1aqs_A Cu-MT, Cu-metallothionein; copper detoxification, metal-thiolate cluster; NMR {Saccharomyces cerevisiae} SCOP: g.46.1.1
Probab=59.12  E-value=5.9  Score=23.34  Aligned_cols=24  Identities=21%  Similarity=0.750  Sum_probs=15.6

Q ss_pred             CCCCcccCCCCCCCCCcccccccc
Q 024518           12 TAIGCDCRGNCLNSHDCSCAKLNS   35 (266)
Q Consensus        12 ~~~gC~C~~~C~~~~~C~C~~~~~   35 (266)
                      -+..|+|..+|....+|+|...+.
T Consensus        20 cqkscscptgcnsddkcpcgnkse   43 (53)
T 1aqs_A           20 CQKSCSCPTGCNSDDKCPCGNKSE   43 (53)
T ss_dssp             STTSCSCCTTCSSSSSCCCCC---
T ss_pred             HhhcCCCCCCCCCCCcCCCCCcch
Confidence            456778877887777788876543


No 36 
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=57.19  E-value=4.9  Score=36.19  Aligned_cols=25  Identities=12%  Similarity=0.089  Sum_probs=21.6

Q ss_pred             CCceeEEeCCCCCCCCeEEEeeeEE
Q 024518           93 KKGWAVRSWDFIPAGAPVCEYIGVL  117 (266)
Q Consensus        93 ~kG~Gv~a~~~I~~G~~I~ey~Gev  117 (266)
                      ..|+||+|+++|++|+.|..-.-.+
T Consensus        31 ~~GrGl~A~~~I~~ge~ll~IP~~~   55 (440)
T 2h21_A           31 TEGLGLVALKDISRNDVILQVPKRL   55 (440)
T ss_dssp             TTEEEEEESSCBCTTEEEEEEEGGG
T ss_pred             CCCCEEEEcccCCCCCEEEEeChhH
Confidence            4699999999999999998876653


No 37 
>2lua_A Protein MALE-specific lethal-2; DNA binding protein, metal binding; NMR {Drosophila melanogaster}
Probab=49.98  E-value=14  Score=22.64  Aligned_cols=23  Identities=26%  Similarity=0.676  Sum_probs=14.5

Q ss_pred             CCCcccCC--------CCCCCCCccccccccc
Q 024518           13 AIGCDCRG--------NCLNSHDCSCAKLNST   36 (266)
Q Consensus        13 ~~gC~C~~--------~C~~~~~C~C~~~~~~   36 (266)
                      ..+|.|..        .|. +..|+|+.....
T Consensus         4 k~~CrCG~~~~~~~~~TC~-~~RCpCY~~~~s   34 (52)
T 2lua_A            4 KPKCRCGISGSSNTLTTCR-NSRCPCYKSYNS   34 (52)
T ss_dssp             CCCCCBTTBSCCCSSSTTT-STTCHHHHTTCC
T ss_pred             CcccccCcccCCCCceeEc-CCccceecCCCc
Confidence            45688842        365 467888875544


No 38 
>3k3s_A Altronate hydrolase; structural genomics, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 2.15A {Shigella flexneri 2a str}
Probab=44.64  E-value=14  Score=26.48  Aligned_cols=16  Identities=19%  Similarity=0.225  Sum_probs=11.9

Q ss_pred             EEEcCCCCCCCeeEee
Q 024518          219 LFAADNIPPLQELTYD  234 (266)
Q Consensus       219 ~fA~rdI~~GeELT~d  234 (266)
                      .+|++||++||+|+++
T Consensus        34 aVAl~~L~aG~~v~~~   49 (105)
T 3k3s_A           34 AVALADLAEGTEVSVD   49 (105)
T ss_dssp             EEESSCBCTTCEEEET
T ss_pred             EEecCccCCCCEEeeC
Confidence            3678888888888753


No 39 
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=43.95  E-value=9.4  Score=27.54  Aligned_cols=20  Identities=10%  Similarity=0.011  Sum_probs=16.7

Q ss_pred             EEEEEEcCCCCCCCeeEeecC
Q 024518          216 RVVLFAADNIPPLQELTYDYG  236 (266)
Q Consensus       216 ~i~~fA~rdI~~GeELT~dYg  236 (266)
                      =.++||+++|++||-|. .|.
T Consensus        15 G~GvfA~~~I~~G~~I~-ey~   34 (119)
T 1n3j_A           15 GYGVFARKSFEKGELVE-ECL   34 (119)
T ss_dssp             CCEEEECCCBCSCEEEC-CCC
T ss_pred             eeEEEECCcCCCCCEEE-Eee
Confidence            46899999999999986 454


No 40 
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=43.51  E-value=24  Score=29.23  Aligned_cols=37  Identities=5%  Similarity=0.020  Sum_probs=23.1

Q ss_pred             CCCceEEEEEeccCCCCccEEEEEEcCCCCCCCeeEe
Q 024518          197 EPNLFVQCVLSSHHDLKLARVVLFAADNIPPLQELTY  233 (266)
Q Consensus       197 ~PN~~~~~v~~~~~~~~~~~i~~fA~rdI~~GeELT~  233 (266)
                      .|++-+...-.........-.++||.++|++||.|..
T Consensus       100 ~~~~g~eV~~~~Ry~~~~~G~Gv~A~~~I~kGE~I~e  136 (247)
T 3rq4_A          100 LPESGFTILPCTRYSMETNGAKIVSTRAWKKNEKLEL  136 (247)
T ss_dssp             SGGGCEEEEECCCCTTCSSCEEEEESSCBCTTCEEEE
T ss_pred             CCCCCcEEEeeeeeeecCCcceEEeCCccCCCCEEEE
Confidence            4555444333322222234678999999999999865


No 41 
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=40.94  E-value=35  Score=28.73  Aligned_cols=37  Identities=3%  Similarity=-0.038  Sum_probs=22.9

Q ss_pred             CCCceEEEEEeccCCCCccEEEEEEcCCCCCCCeeEe
Q 024518          197 EPNLFVQCVLSSHHDLKLARVVLFAADNIPPLQELTY  233 (266)
Q Consensus       197 ~PN~~~~~v~~~~~~~~~~~i~~fA~rdI~~GeELT~  233 (266)
                      .|++-+...-.........-.++||.++|++||-|.-
T Consensus       128 ~~~~gfeV~~~~ry~~e~~G~GlfA~~~I~kGe~I~E  164 (273)
T 3s8p_A          128 ATDSGFEILPCNRYSSEQNGAKIVATKEWKRNDKIEL  164 (273)
T ss_dssp             SGGGCEEEEEECCCTTCSSEEEEEESSCBCTTCEEEE
T ss_pred             CCCCCceEEeccceeecCCCceEEECCccCCCCEEEE
Confidence            4444443333332222234689999999999998763


No 42 
>1kvd_B SMK toxin; halotolerant yeast; 1.80A {Pichia farinosa} SCOP: d.70.1.2 PDB: 1kve_B
Probab=40.49  E-value=15  Score=23.24  Aligned_cols=15  Identities=33%  Similarity=0.592  Sum_probs=13.7

Q ss_pred             ceeEEeCCCCCCCCe
Q 024518           95 GWAVRSWDFIPAGAP  109 (266)
Q Consensus        95 G~Gv~a~~~I~~G~~  109 (266)
                      =|||-|.+.|.+|++
T Consensus         6 iwgvgadeaidkgtp   20 (77)
T 1kvd_B            6 IWGVGADEAIDKGTP   20 (77)
T ss_dssp             EEEEEEESSCCCCCC
T ss_pred             EeeccchhhhhcCCC
Confidence            399999999999986


No 43 
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=33.66  E-value=24  Score=26.75  Aligned_cols=18  Identities=6%  Similarity=-0.086  Sum_probs=15.4

Q ss_pred             cEEEEEEcCCCCCCCeeE
Q 024518          215 ARVVLFAADNIPPLQELT  232 (266)
Q Consensus       215 ~~i~~fA~rdI~~GeELT  232 (266)
                      .=.++||+++|++||-|.
T Consensus        40 kG~Gl~A~~~I~~G~~I~   57 (166)
T 3f9x_A           40 KGRGVIATKQFSRGDFVV   57 (166)
T ss_dssp             TEEEEEESSCBCTTCEEE
T ss_pred             ceeEEEECCCcCCCCEEE
Confidence            357899999999999775


No 44 
>1qjl_A Metallothionein; metal-binding, detoxification, radical scavenger; NMR {Strongylocentrotus purpuratus} SCOP: g.46.1.1
Probab=32.77  E-value=20  Score=19.08  Aligned_cols=12  Identities=42%  Similarity=1.434  Sum_probs=7.0

Q ss_pred             EcCCCCCCCCCC
Q 024518           62 ECGPKCGCGPDC   73 (266)
Q Consensus        62 EC~~~C~C~~~C   73 (266)
                      +|++.|+|+..|
T Consensus         8 ~cg~~CkCgs~C   19 (28)
T 1qjl_A            8 KCANGCKCGSGC   19 (28)
T ss_dssp             CCCTTCCTTSCC
T ss_pred             ccCCCCccCCCc
Confidence            456666666544


No 45 
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=32.45  E-value=14  Score=32.34  Aligned_cols=19  Identities=32%  Similarity=0.352  Sum_probs=16.5

Q ss_pred             EEEEEEcCCCCCCCeeEee
Q 024518          216 RVVLFAADNIPPLQELTYD  234 (266)
Q Consensus       216 ~i~~fA~rdI~~GeELT~d  234 (266)
                      |-.++|.|||++||.||-+
T Consensus       279 rrSlva~~di~~Ge~lt~~  297 (350)
T 3g8r_A          279 RRGVFATRPVAAGEALTAD  297 (350)
T ss_dssp             SCEEEESSCBCTTCBCBTT
T ss_pred             ceEEEEccccCCCCCccHH
Confidence            4478999999999999875


No 46 
>3k3s_A Altronate hydrolase; structural genomics, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 2.15A {Shigella flexneri 2a str}
Probab=30.85  E-value=25  Score=25.08  Aligned_cols=16  Identities=31%  Similarity=0.241  Sum_probs=12.1

Q ss_pred             EeCCCCCCCCeEEEee
Q 024518           99 RSWDFIPAGAPVCEYI  114 (266)
Q Consensus        99 ~a~~~I~~G~~I~ey~  114 (266)
                      +|.++|++|+.|..|-
T Consensus        65 iAl~dI~~Ge~ViKYG   80 (105)
T 3k3s_A           65 FALTDIAKGANVIKYG   80 (105)
T ss_dssp             EESSCBCTTCEEEETT
T ss_pred             EEEcccCCCCeEEECC
Confidence            5677788888888773


No 47 
>3laz_A D-galactarate dehydratase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.92A {Escherichia coli}
Probab=27.97  E-value=30  Score=24.37  Aligned_cols=19  Identities=26%  Similarity=0.328  Sum_probs=14.5

Q ss_pred             EeCCCCCCCCeEEEeeeEEe
Q 024518           99 RSWDFIPAGAPVCEYIGVLR  118 (266)
Q Consensus        99 ~a~~~I~~G~~I~ey~Gevi  118 (266)
                      +|.++|++|+.|..| |++|
T Consensus        58 iAl~dI~~Ge~ViKY-G~~I   76 (99)
T 3laz_A           58 VALLDIPANGEIIRY-GEVI   76 (99)
T ss_dssp             EESSCBCTTCEEEET-TEEE
T ss_pred             EEEcccCCCCeEEEC-CcCh
Confidence            578888899999888 4444


No 48 
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=27.88  E-value=18  Score=31.64  Aligned_cols=19  Identities=21%  Similarity=0.109  Sum_probs=16.5

Q ss_pred             EEEEEEcCCCCCCCeeEee
Q 024518          216 RVVLFAADNIPPLQELTYD  234 (266)
Q Consensus       216 ~i~~fA~rdI~~GeELT~d  234 (266)
                      |-.++|.+||++||-||.+
T Consensus       290 rrsl~a~~di~~Ge~~t~~  308 (349)
T 2wqp_A          290 FASVVADKDIKKGELLSGD  308 (349)
T ss_dssp             SCEEEESSCBCTTCBCCTT
T ss_pred             eeEEEEccccCCCCEecHH
Confidence            4468999999999999975


No 49 
>2l61_A EC protein I/II; metallothionein, wheat EC-1, Zn binding, metal-thiolate CLUS metal binding protein; NMR {Triticum aestivum} PDB: 2l62_A
Probab=27.84  E-value=32  Score=17.76  Aligned_cols=17  Identities=29%  Similarity=0.901  Sum_probs=13.7

Q ss_pred             CCcccCCCCCCCCCccc
Q 024518           14 IGCDCRGNCLNSHDCSC   30 (266)
Q Consensus        14 ~gC~C~~~C~~~~~C~C   30 (266)
                      ..|.|...|--...|.|
T Consensus         6 d~cGCpvPCpGg~acRc   22 (26)
T 2l61_A            6 DKCGCAVPCPGGTGCRC   22 (26)
T ss_dssp             GGGSSCSSCSSSTTSGG
T ss_pred             CCCCCcccCCCCcceee
Confidence            46888888887778888


No 50 
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=26.00  E-value=39  Score=26.66  Aligned_cols=18  Identities=22%  Similarity=0.143  Sum_probs=15.5

Q ss_pred             cEEEEEEcCCCCCCCeeE
Q 024518          215 ARVVLFAADNIPPLQELT  232 (266)
Q Consensus       215 ~~i~~fA~rdI~~GeELT  232 (266)
                      .-.++||+++|++||-|.
T Consensus        62 ~G~GlfA~~~I~~G~~I~   79 (192)
T 2w5y_A           62 HGRGLFCKRNIDAGEMVI   79 (192)
T ss_dssp             SSEEEEESSCBCTTCEEE
T ss_pred             ceeEEEECcccCCCCEEE
Confidence            357899999999999876


No 51 
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=25.98  E-value=20  Score=31.74  Aligned_cols=19  Identities=16%  Similarity=0.155  Sum_probs=16.5

Q ss_pred             EEEEEEcCCCCCCCeeEee
Q 024518          216 RVVLFAADNIPPLQELTYD  234 (266)
Q Consensus       216 ~i~~fA~rdI~~GeELT~d  234 (266)
                      +-.++|.+||++||-||.+
T Consensus       315 rrSlva~~di~~Ge~it~~  333 (385)
T 1vli_A          315 YRGIFTTAPIQKGEAFSED  333 (385)
T ss_dssp             SCEEEESSCBCTTCBCCTT
T ss_pred             eeEEEEccccCCCCEecHH
Confidence            4468999999999999976


No 52 
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=23.17  E-value=46  Score=27.00  Aligned_cols=17  Identities=12%  Similarity=-0.099  Sum_probs=14.7

Q ss_pred             EEEEEEcCCCCCCCeeE
Q 024518          216 RVVLFAADNIPPLQELT  232 (266)
Q Consensus       216 ~i~~fA~rdI~~GeELT  232 (266)
                      =.++||+++|++|+-|.
T Consensus       103 G~Gl~A~~~I~~G~~I~  119 (232)
T 3ooi_A          103 GWGLRTKTDIKKGEFVN  119 (232)
T ss_dssp             SEEEEESSCBCTTCEEE
T ss_pred             eeEEEECceecCCceee
Confidence            46899999999999874


No 53 
>4gtw_A Ectonucleotide pyrophosphatase/phosphodiesterase member 2, alkaline phosphodiesterase...; bone mineralization, hydrolase; HET: NAG BMA MAN AMP; 2.70A {Mus musculus} PDB: 4gtx_A* 4gty_A* 4gtz_A* 4b56_A*
Probab=22.61  E-value=18  Score=35.37  Aligned_cols=20  Identities=30%  Similarity=0.943  Sum_probs=0.0

Q ss_pred             CCCCcccCCCCCCCCCccccc
Q 024518           12 TAIGCDCRGNCLNSHDCSCAK   32 (266)
Q Consensus        12 ~~~gC~C~~~C~~~~~C~C~~   32 (266)
                      ...+|.|...|.+..+| |.-
T Consensus        16 ~~~~~~~~~~~~~~~~~-~~~   35 (823)
T 4gtw_A           16 TFSNCRCDAACVSLGNC-CLD   35 (823)
T ss_dssp             ---------------------
T ss_pred             CCCCCccchhhcccccc-hhc
Confidence            34589998888877777 443


No 54 
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=21.57  E-value=66  Score=25.82  Aligned_cols=17  Identities=18%  Similarity=0.288  Sum_probs=14.4

Q ss_pred             ceeEEeCCCCCCCCeEE
Q 024518           95 GWAVRSWDFIPAGAPVC  111 (266)
Q Consensus        95 G~Gv~a~~~I~~G~~I~  111 (266)
                      -.+|||+++|++||=|.
T Consensus       170 ~i~~~A~RdI~~GEELT  186 (222)
T 3ope_A          170 RIGLYALKDMPAGTELT  186 (222)
T ss_dssp             EEEEEESSCBCTTCBCE
T ss_pred             EEEEEECCccCCCCEEE
Confidence            47899999999997654


No 55 
>1df6_A Cycloviolacin O1; cyclic cystine knot, backbone cyclic, 3-10 helix, double- stranded anti- parallel beta-sheet, hairpin bends, loops; NMR {Viola odorata} SCOP: g.3.3.2
Probab=21.43  E-value=13  Score=20.04  Aligned_cols=17  Identities=35%  Similarity=1.069  Sum_probs=10.7

Q ss_pred             CCCCcccCC-CCCCCCCc
Q 024518           12 TAIGCDCRG-NCLNSHDC   28 (266)
Q Consensus        12 ~~~gC~C~~-~C~~~~~C   28 (266)
                      ..+||+|++ .|..+.-|
T Consensus        11 ~~~GCsCk~kVCy~ns~~   28 (30)
T 1df6_A           11 ALLGCSCSNRVCYNGIPC   28 (30)
T ss_dssp             GGGTCEEETTEEESSSBC
T ss_pred             ccccceecCCeEEccccc
Confidence            456899986 46554444


Done!