Query 024520
Match_columns 266
No_of_seqs 150 out of 983
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 09:41:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024520.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024520hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2hcz_X Beta-expansin 1A; domai 100.0 4.2E-66 1.4E-70 462.5 23.1 214 37-266 16-245 (245)
2 1n10_A PHL P I, pollen allerge 100.0 2.1E-65 7.2E-70 456.8 26.1 210 37-262 16-241 (241)
3 3d30_A YOAJ, expansin like pro 100.0 7.8E-54 2.7E-58 375.1 25.0 194 38-266 4-207 (208)
4 1wc2_A Endoglucanase; hydrolas 100.0 1E-33 3.6E-38 239.1 8.8 125 38-173 12-164 (181)
5 3ft1_A PHL P 3 allergen; beta- 100.0 1.2E-29 4E-34 197.6 12.0 93 171-266 3-100 (100)
6 2jnz_A PHL P 3 allergen; timot 99.9 3.7E-27 1.3E-31 185.5 12.0 90 171-263 14-108 (108)
7 1bmw_A PHL P II, pollen allerg 99.9 3.7E-27 1.3E-31 182.4 -1.5 89 171-263 3-96 (96)
8 1bw3_A Barwin, basic barley SE 99.7 3.8E-17 1.3E-21 131.2 5.9 104 41-167 4-124 (125)
9 4avr_A PA4485; unknown functio 99.3 3.7E-11 1.3E-15 92.0 11.6 92 41-164 2-94 (95)
10 3sul_A Cerato-platanin-like pr 98.0 1.9E-05 6.6E-10 62.8 8.6 68 74-165 45-116 (122)
11 2kqa_A Cerato-platanin; elicit 98.0 1.7E-05 5.7E-10 63.6 7.8 67 74-165 51-120 (129)
12 3m3g_A EPL1 protein; fungal, p 98.0 1.6E-05 5.4E-10 63.2 7.1 66 74-165 45-114 (120)
13 3suj_A Cerato-platanin 1; doub 97.9 1.9E-05 6.4E-10 63.3 5.7 71 74-165 45-119 (127)
14 3suk_A Cerato-platanin-like pr 97.8 4.1E-05 1.4E-09 61.2 6.6 70 74-165 46-119 (125)
15 3sum_A Cerato-platanin-like pr 97.7 0.00014 4.9E-09 58.6 8.0 65 74-165 49-121 (136)
16 2eng_A Endoglucanase V; cellul 94.7 0.022 7.6E-07 48.9 3.7 53 75-143 72-124 (210)
17 3nrl_A Uncharacterized protein 50.7 16 0.00053 26.6 3.6 20 78-97 22-41 (81)
18 3pe9_A Fibronectin(III)-like m 28.5 1.1E+02 0.0038 22.5 5.4 46 193-242 29-76 (98)
19 2kct_A Cytochrome C-type bioge 27.7 49 0.0017 24.5 3.3 30 229-258 30-62 (94)
20 2c9r_A COPC, copper resistance 22.9 49 0.0017 24.5 2.5 27 151-177 73-102 (102)
21 1lyq_A PCOC copper resistance 21.8 52 0.0018 24.5 2.5 27 151-177 75-104 (104)
22 1sr3_A APO-CCME; OB fold, beta 21.5 71 0.0024 25.3 3.3 30 229-258 50-79 (136)
23 2a9d_A Sulfite oxidase; molybd 21.2 1.4E+02 0.0047 27.4 5.7 24 189-212 278-302 (372)
24 1ogp_A Sulfite oxidase; oxidor 21.2 1E+02 0.0036 28.4 4.9 24 189-212 291-315 (393)
25 3uto_A Twitchin; kinase, muscl 21.0 98 0.0034 29.6 4.9 41 198-238 45-86 (573)
26 2blf_A SORA, sulfite\:cytochro 20.1 1E+02 0.0034 28.4 4.5 50 191-241 289-347 (373)
27 1j6q_A Cytochrome C maturation 20.0 93 0.0032 24.6 3.7 30 229-258 54-84 (136)
No 1
>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}
Probab=100.00 E-value=4.2e-66 Score=462.46 Aligned_cols=214 Identities=36% Similarity=0.623 Sum_probs=199.6
Q ss_pred CCCceEEEEEEeCCCCCCCC--CccccCCCCCCCCCCCCeEEEechhccCCCCcCCceEEEEeCCCCcccCCCCeEEEEE
Q 024520 37 PGPWRLAHATFYGDESASET--MGGACGYGNLFSNGYGTDTAALSSTLFNNGYACGTCYQIKCYNSPHCYKYVPFTTVTA 114 (266)
Q Consensus 37 ~~~w~~g~aT~Yg~~~~~g~--~~GACGyg~~~~~~~~~~~aA~s~~~~~~g~~CG~C~ev~c~~~~~C~~~~~sv~V~i 114 (266)
.++|++|+||||+++++.++ ++|||||++++..|++.++||+|+.+|++|..||+||||+|.+++.|.. ++|+|+|
T Consensus 16 ~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~~~~C~~--~sv~V~V 93 (245)
T 2hcz_X 16 NGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSG--NPVTVYI 93 (245)
T ss_dssp CCCCEEEEEEECSCTTSCSSTTSCCTTCCCCTTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCSSSSBCS--SCEEEEE
T ss_pred CCceeeeEEEEeCCCCCCCcCCCCccCCCCCCCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCCCCccCC--CCEEEEE
Confidence 46799999999999998887 8999999998888899999999999999999999999999998788975 4899999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCCCceeeChHHHHhhcc-------ccCCeeEEEEEEeecCCCC--CeeEEEc--CCCceE
Q 024520 115 TNLCPPNWSQDSNNGGWCNPPRAHFDMSKPAFMKIGA-------WKAGIVPVLFRRVPCIKPG--GIRFAFQ--GNGYWL 183 (266)
Q Consensus 115 tD~CP~~~~~~~~~~~~C~~~~~hfDLs~~AF~~ia~-------~~~G~v~i~~r~V~C~~~g--~i~~~v~--sn~~w~ 183 (266)
||+|| |++++.|||||+.||.+||+ ++.|+|+|+||||+|+++| ||+|+++ ||+||+
T Consensus 94 tD~C~------------C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~ni~f~v~~Gs~~~~~ 161 (245)
T 2hcz_X 94 TDMNY------------EPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYL 161 (245)
T ss_dssp EEECC------------CTTSSSEEEECHHHHHHTBCTTCHHHHTTTCCEEEEEEEECCCCSTTCCCEEEECCCCSSSCC
T ss_pred EeccC------------CCCCCccEEcCHHHHHHHhccccccccccCCEEEEEEEEEecCCCCCCcEEEEEcCCCCcceE
Confidence 99998 54568999999999999999 7899999999999999984 6999998 799999
Q ss_pred EEEEEecCCCcceEEEEEEecCc-ceEEccCCCCceEEeccC--CCCCceEEEEEEccCCeEEEEceeeCCCCCCCcEEe
Q 024520 184 LVYVMNVAGGGDIASMWVKGTRT-GWISMSHNWGASYQAFAT--LGGQALSFKIQSYSTKETIIAYNVAPANWNVGLTYK 260 (266)
Q Consensus 184 ~v~v~n~~G~~~I~sVeV~~~~~-~W~~m~r~~g~~W~~~~~--l~g~p~s~RvTs~~~G~~i~~~~viP~~w~~G~ty~ 260 (266)
+|+|.|++|+++|++|||+++++ .|++|+|+|||+|+++.. |.+ ||+||||+.+ ||+|++.||||++|++|+||+
T Consensus 162 avlv~n~~g~g~V~~V~ik~~~~~~W~~m~r~~G~~W~~~~~~~l~g-pls~RvT~~~-G~~v~~~nViP~~w~~g~ty~ 239 (245)
T 2hcz_X 162 AVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKG-PFSIRLTSES-GKKVIAKDVIPANWRPDAVYT 239 (245)
T ss_dssp CEEEECCCTTCCEEEEEBCCSSSCSCBCCEEEETTEEECSCCSSCCS-SCCEEEEETT-SCEEEESCSCCSSCCTTCEEE
T ss_pred EEEEEecCCCCCEEEEEEEeCCCCceeECccCCCCEEEECCCCCCCC-CEEEEEEEeC-CcEEEEeeeecCCCCCCCEEe
Confidence 99999999999999999999876 799999999999999875 666 9999999999 999999999999999999999
Q ss_pred cCcccC
Q 024520 261 SNVNFH 266 (266)
Q Consensus 261 ~~~qf~ 266 (266)
+++||+
T Consensus 240 ~~~qf~ 245 (245)
T 2hcz_X 240 SNVQFY 245 (245)
T ss_dssp CSCCCC
T ss_pred CccccC
Confidence 999994
No 2
>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3
Probab=100.00 E-value=2.1e-65 Score=456.79 Aligned_cols=210 Identities=28% Similarity=0.548 Sum_probs=188.5
Q ss_pred CCCceEEEEEEeCCCCCCCC--CccccCCCCCCCCCCCCeEEEechhccCCCCcCCceEEEEeCCCCcccCCCCeEEEEE
Q 024520 37 PGPWRLAHATFYGDESASET--MGGACGYGNLFSNGYGTDTAALSSTLFNNGYACGTCYQIKCYNSPHCYKYVPFTTVTA 114 (266)
Q Consensus 37 ~~~w~~g~aT~Yg~~~~~g~--~~GACGyg~~~~~~~~~~~aA~s~~~~~~g~~CG~C~ev~c~~~~~C~~~~~sv~V~i 114 (266)
.++|++|+||||++++++|+ ++|||||++++..|++.++||+|+.+|++|+.||+||||+|.+.+.|.++ +|+|+|
T Consensus 16 ~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~~~~C~~~--~v~V~V 93 (241)
T 1n10_A 16 GDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPEACSGE--PVVVHI 93 (241)
T ss_dssp CCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSSTTBCSC--CEEEEE
T ss_pred cCCceeeEEEEeCCCCCCCcCCCCeeCCCCCcCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCCCCccCCC--CEEEEE
Confidence 56799999999999998887 89999999988889999999999999999999999999999987789754 899999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCCCceeeChHHHHhhcc-------ccCCeeEEEEEEeecCCCC--CeeEEEc--CCCceE
Q 024520 115 TNLCPPNWSQDSNNGGWCNPPRAHFDMSKPAFMKIGA-------WKAGIVPVLFRRVPCIKPG--GIRFAFQ--GNGYWL 183 (266)
Q Consensus 115 tD~CP~~~~~~~~~~~~C~~~~~hfDLs~~AF~~ia~-------~~~G~v~i~~r~V~C~~~g--~i~~~v~--sn~~w~ 183 (266)
||+|+ |++++.|||||++||.+||+ ++.|+|+|+||||+|+++| ||+|+|+ ||+||+
T Consensus 94 tD~C~------------C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~~i~f~v~~Gs~~~~~ 161 (241)
T 1n10_A 94 TDDNE------------EPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPNYL 161 (241)
T ss_dssp EEECS------------SCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEECCCCCCTTCCCEEEECTTCBTTEE
T ss_pred eEecC------------CCCCCcceecCHHHHHHhhccCcccccccCCEEEEEEEEEeCCCCCCCceEEEEcCCCCcceE
Confidence 99996 76678999999999999999 7899999999999999984 8999998 899999
Q ss_pred EEEEEecCCCcceEEEEEEecCc-ceEEccCCCCceEEeccC--CCCCceEEEEEEccCCeEEEEceeeCCCCCCCcEEe
Q 024520 184 LVYVMNVAGGGDIASMWVKGTRT-GWISMSHNWGASYQAFAT--LGGQALSFKIQSYSTKETIIAYNVAPANWNVGLTYK 260 (266)
Q Consensus 184 ~v~v~n~~G~~~I~sVeV~~~~~-~W~~m~r~~g~~W~~~~~--l~g~p~s~RvTs~~~G~~i~~~~viP~~w~~G~ty~ 260 (266)
+|+|+|++|.++|++|||+++++ .|++|+|+|||+|+++.. |.+ ||+||||+.+ ||+|+++||||++|++|+||+
T Consensus 162 ~vlv~n~~g~g~V~~V~ik~~~~~~W~~m~r~wG~~W~~~~~~~l~g-pls~RvT~~~-G~~v~~~nViP~~w~~g~ty~ 239 (241)
T 1n10_A 162 ALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTG-PFTVRYTTEG-GTKTEAEDVIPEGWKADTSYE 239 (241)
T ss_dssp EEEEECCCCSSCEEEEEEEETTCCCCEECBCCTTTCEEEECSSCCCS-CEEEEEEESS-SCEEEEEEEECSSCCSSEEEE
T ss_pred EEEEEecCCCCCEEEEEEEeCCCCCeEECccCcCcEEEeCCCCCCCC-CEEEEEEEeC-CcEEEEccccCCCCCCCCEEe
Confidence 99999999999999999999874 899999999999999875 676 9999999999 999999999999999999999
Q ss_pred cC
Q 024520 261 SN 262 (266)
Q Consensus 261 ~~ 262 (266)
++
T Consensus 240 ~~ 241 (241)
T 1n10_A 240 SK 241 (241)
T ss_dssp C-
T ss_pred CC
Confidence 74
No 3
>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A
Probab=100.00 E-value=7.8e-54 Score=375.12 Aligned_cols=194 Identities=22% Similarity=0.297 Sum_probs=174.8
Q ss_pred CCceEEEEEEeCCCCCCCCCccccCCCCCCCCCCCCeEEEechhccCCC----CcCCceEEEEeCCCCcccCCCCeEEEE
Q 024520 38 GPWRLAHATFYGDESASETMGGACGYGNLFSNGYGTDTAALSSTLFNNG----YACGTCYQIKCYNSPHCYKYVPFTTVT 113 (266)
Q Consensus 38 ~~w~~g~aT~Yg~~~~~g~~~GACGyg~~~~~~~~~~~aA~s~~~~~~g----~~CG~C~ev~c~~~~~C~~~~~sv~V~ 113 (266)
++.+.|+||||++.. .+||||+.. .|++.++||+|+.+|++| ..||+||||+|. + ++|+|+
T Consensus 4 ~~~~~G~aT~Y~~g~----~~GACG~~~---~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~~-------~-gsv~V~ 68 (208)
T 3d30_A 4 DDLHEGYATYTGSGY----SGGAFLLDP---IPSDMEITAINPADLNYGGVKAALAGSYLEVEGP-------K-GKTTVY 68 (208)
T ss_dssp TCCEEEEEEECSTTS----SSCTTCCCC---CCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEET-------T-EEEEEE
T ss_pred CCcEEEEEEEcCCCC----CCCcCCCCC---CCCCCEEEEeCHHHhCCCCcCccccCCEEEEEeC-------C-CcEEEE
Confidence 456899999999854 479999863 457789999999999988 899999999982 2 489999
Q ss_pred EecCCCCCCCCCCCCCCCCCCCCCceeeChHHHHhhccccCCeeEEEEEEeecCCCCCeeEEEc--CCCceEEEEEEecC
Q 024520 114 ATNLCPPNWSQDSNNGGWCNPPRAHFDMSKPAFMKIGAWKAGIVPVLFRRVPCIKPGGIRFAFQ--GNGYWLLVYVMNVA 191 (266)
Q Consensus 114 itD~CP~~~~~~~~~~~~C~~~~~hfDLs~~AF~~ia~~~~G~v~i~~r~V~C~~~g~i~~~v~--sn~~w~~v~v~n~~ 191 (266)
|+|+||+ |. ..|||||+.||.+||.++.|+++|+||+|+|+++|+|+|+++ +|+||++|||+|++
T Consensus 69 v~D~CP~-----------C~--~~~~DLS~~aF~~la~~~~G~i~v~~~~V~C~~~G~i~f~v~~Gs~~~~~~v~v~n~~ 135 (208)
T 3d30_A 69 VTDLYPE-----------GA--RGALDLSPNAFRKIGNMKDGKINIKWRVVKAPITGNFTYRIKEGSSRWWAAIQVRNHK 135 (208)
T ss_dssp EEEECTT-----------CC--TTCEEECHHHHHHHSCGGGSSEEEEEEEECCCCCSCCEEEECTTCSSSEEEEEEESCS
T ss_pred EEECCCC-----------CC--CCeEECCHHHHHHhcccCCCEEEEEEEEeCCCCCCceeEEEcCCCCCceEEEEEEecC
Confidence 9999998 84 689999999999999999999999999999999999999998 89999999999998
Q ss_pred CCcceEEEEEEecCcceEEccCCCCceEEeccCCCCCceEEEEEEccCCeEEEEceeeCCCCCC----CcEEecCcccC
Q 024520 192 GGGDIASMWVKGTRTGWISMSHNWGASYQAFATLGGQALSFKIQSYSTKETIIAYNVAPANWNV----GLTYKSNVNFH 266 (266)
Q Consensus 192 G~~~I~sVeV~~~~~~W~~m~r~~g~~W~~~~~l~g~p~s~RvTs~~~G~~i~~~~viP~~w~~----G~ty~~~~qf~ 266 (266)
++|++|||+++ +.|++|+|+|+|+|..+. +.++||+||||+.+ ||+| .++||++|++ |.+|++++||.
T Consensus 136 --g~v~~v~i~~~-~~W~~m~r~~~n~~~~~~-~~~~pls~rvT~~~-G~~v--~~vip~~w~~~~~~~~~~~~~~Qf~ 207 (208)
T 3d30_A 136 --YPVMKMEYEKD-GKWINMEKMDYNHFVSTN-LGTGSLKVRMTDIR-GKVV--KDTIPKLPESGTSKAYTVPGHVQFP 207 (208)
T ss_dssp --SCEEEEEEEET-TEEEEEEECTTSCEEEEC-CCSSSEEEEEEETT-CCEE--EEEECCCCSSCCSSCEEEECCCCCC
T ss_pred --CCEEEEEEecC-CcEEEccccccceeecCC-CCCCCEEEEEEECC-CCEE--EEEECCCCccCcccceEEeCcCccC
Confidence 49999999987 579999999998887654 44569999999999 9998 8999999997 89999999994
No 4
>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1
Probab=100.00 E-value=1e-33 Score=239.11 Aligned_cols=125 Identities=26% Similarity=0.396 Sum_probs=106.3
Q ss_pred CCceEEEEEEeCCCCCCCCCccccCCC-----CCCCCCCCCeEEEechhccCCC------CcCCceEEEEeCCC------
Q 024520 38 GPWRLAHATFYGDESASETMGGACGYG-----NLFSNGYGTDTAALSSTLFNNG------YACGTCYQIKCYNS------ 100 (266)
Q Consensus 38 ~~w~~g~aT~Yg~~~~~g~~~GACGyg-----~~~~~~~~~~~aA~s~~~~~~g------~~CG~C~ev~c~~~------ 100 (266)
.+|..++||||++. ++|||||+ ++.+.+++.++||||++||++| +.||+||||+|++.
T Consensus 12 ~g~~~A~aT~Yg~~-----~gGACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~~c~~cg 86 (181)
T 1wc2_A 12 NGKSCASTTNYHDS-----HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQG 86 (181)
T ss_dssp TTEEEEEEEEECCC-----BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSC
T ss_pred CCccccceeEecCC-----CCcccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCCCCccccc
Confidence 35999999999986 47999999 5556678999999999999997 89999999999763
Q ss_pred CcccCCCCeEEEEEecCCCCCCCCCCCCCCCCCCC-----------CCceeeChHHHHhhccccCCeeEEEEEEeecCCC
Q 024520 101 PHCYKYVPFTTVTATNLCPPNWSQDSNNGGWCNPP-----------RAHFDMSKPAFMKIGAWKAGIVPVLFRRVPCIKP 169 (266)
Q Consensus 101 ~~C~~~~~sv~V~itD~CP~~~~~~~~~~~~C~~~-----------~~hfDLs~~AF~~ia~~~~G~v~i~~r~V~C~~~ 169 (266)
.+|.++ ++|+|||||+||++ .+|++||.++ +.||||+.+| .+|+....|+++|+||||+|+..
T Consensus 87 ~~~~~g-~SI~VtaTN~CPpn----~~nggWCn~pp~~~~~n~~G~~~HFDLs~pa-~~Ia~~~~GivpV~yrrV~C~~~ 160 (181)
T 1wc2_A 87 GPVREG-LSKTFMITNLCPNI----YPNQDWCNQGSQYGGHNKYGYELHLDLENGR-SQVTGMGWNNPETTWEVVNCDSE 160 (181)
T ss_dssp CCCCTT-CEEEEEEEEEECSS----TTSTTTSCCSSSSSCCCTTSCSEEEEEECTT-STTGGGTCSSEEEEEEEECHHHH
T ss_pred ccCCCC-CeEEEEEecCCCCC----CCCCCccCCCcccCcccccCccccccccchH-HHhhhhcCCCceeEEEEEeCCCC
Confidence 234444 69999999999974 3678999764 7899999999 89999999999999999999975
Q ss_pred CCee
Q 024520 170 GGIR 173 (266)
Q Consensus 170 g~i~ 173 (266)
+++.
T Consensus 161 ~~~~ 164 (181)
T 1wc2_A 161 HNHD 164 (181)
T ss_dssp HHHC
T ss_pred CCcC
Confidence 4443
No 5
>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A
Probab=99.96 E-value=1.2e-29 Score=197.59 Aligned_cols=93 Identities=18% Similarity=0.329 Sum_probs=88.3
Q ss_pred CeeEEEc--CCCceEEEEEEecCCCcceEEEEEEecCc-ceEEccCCCCceEEecc--CCCCCceEEEEEEccCCeEEEE
Q 024520 171 GIRFAFQ--GNGYWLLVYVMNVAGGGDIASMWVKGTRT-GWISMSHNWGASYQAFA--TLGGQALSFKIQSYSTKETIIA 245 (266)
Q Consensus 171 ~i~~~v~--sn~~w~~v~v~n~~G~~~I~sVeV~~~~~-~W~~m~r~~g~~W~~~~--~l~g~p~s~RvTs~~~G~~i~~ 245 (266)
+|+|+|+ +++||++|+|.|++|+++|.+||||++++ .|++|+| ||++|++++ +|.+ ||+||||+.+ |+++++
T Consensus 3 ~i~F~V~~gs~~~~l~vlv~nv~G~gdI~~V~ik~s~t~~W~~M~r-wGa~W~~~s~~~l~G-plSfRvt~~~-G~~~v~ 79 (100)
T 3ft1_A 3 QVTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTK-KGNVWEVKSSKPLVG-PFNFRFMSKG-GMRNVF 79 (100)
T ss_dssp EEEEEECTTCBTTEEEEEEEEECTTCCEEEEEEECTTCCCCEECEE-ETTEEEEECSSCCCS-SEEEEEEETT-CCEEEE
T ss_pred CEEEEEecCCCcceEEEEEEEcCCCccEEEEEEEeCCCCCeEEecc-cCCEeEeCCCCCCCC-CEEEEEEEcC-CcEEEE
Confidence 7999998 89999999999999999999999999987 7999999 999999986 6777 9999999998 999999
Q ss_pred ceeeCCCCCCCcEEecCcccC
Q 024520 246 YNVAPANWNVGLTYKSNVNFH 266 (266)
Q Consensus 246 ~~viP~~w~~G~ty~~~~qf~ 266 (266)
.||||++|++|+||++++||.
T Consensus 80 ~nViPa~W~~G~ty~s~vq~~ 100 (100)
T 3ft1_A 80 DEVIPTAFSIGKTYKPEEQEF 100 (100)
T ss_dssp EEEECTTCCTTCEECCCCBCC
T ss_pred CeEeCCCCCCCcEEecccccC
Confidence 999999999999999999983
No 6
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=99.94 E-value=3.7e-27 Score=185.47 Aligned_cols=90 Identities=19% Similarity=0.362 Sum_probs=83.9
Q ss_pred CeeEEEc--CCCceEEEEEEecCCCcceEEEEEEe-cCcceEEccCCCCceEEecc--CCCCCceEEEEEEccCCeEEEE
Q 024520 171 GIRFAFQ--GNGYWLLVYVMNVAGGGDIASMWVKG-TRTGWISMSHNWGASYQAFA--TLGGQALSFKIQSYSTKETIIA 245 (266)
Q Consensus 171 ~i~~~v~--sn~~w~~v~v~n~~G~~~I~sVeV~~-~~~~W~~m~r~~g~~W~~~~--~l~g~p~s~RvTs~~~G~~i~~ 245 (266)
+|.|+|+ +++||++|+|.|++|+++|.+||||+ +.+.|++|+|+ |++|+++. +|.+ ||+||||+.+ |+++++
T Consensus 14 ~v~f~V~~~snp~~l~VlV~nv~G~GdI~~V~Ik~~~~~~W~~M~rn-Ga~W~~~s~~~L~G-plSfRvtts~-G~~~va 90 (108)
T 2jnz_A 14 QVTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GNVWEVKSSKPLVG-PFNFRFMSKG-GMRNVF 90 (108)
T ss_dssp EEEEEECTTCCSSEEEEEEEEEBTTBCEEEEEEECTTCCCCEECEEE-TTEEEEECSSCCCS-SEEEEEEETT-TEEEEE
T ss_pred cEEEEEecCCCccEEEEEEEEeCCCCCEEEEEEEeCCCCcEeEcccc-CCEeEeCCCCCCCC-CEEEEEEEcC-CcEEEE
Confidence 8999997 89999999999999999999999997 44579999999 99999986 6887 9999999998 999999
Q ss_pred ceeeCCCCCCCcEEecCc
Q 024520 246 YNVAPANWNVGLTYKSNV 263 (266)
Q Consensus 246 ~~viP~~w~~G~ty~~~~ 263 (266)
.||||++|++|+||++++
T Consensus 91 ~nViPa~W~~Gqty~s~v 108 (108)
T 2jnz_A 91 DEVIPTAFSIGKTYKPEE 108 (108)
T ss_dssp EEEECSSCCTTCEECCCC
T ss_pred CeEECCCCCCCCEEeCCC
Confidence 999999999999999874
No 7
>1bmw_A PHL P II, pollen allergen PHL P2; allergy, immunoglobulins, immunology,; NMR {Phleum pratense} SCOP: b.7.3.1 PDB: 1who_A 1whp_A 2vxq_A
Probab=99.92 E-value=3.7e-27 Score=182.36 Aligned_cols=89 Identities=19% Similarity=0.365 Sum_probs=81.8
Q ss_pred CeeEEEc--CCCceEEEEEEecCCCcceEEEEEEec-CcceEEccCCCCceEEecc--CCCCCceEEEEEEccCCeEEEE
Q 024520 171 GIRFAFQ--GNGYWLLVYVMNVAGGGDIASMWVKGT-RTGWISMSHNWGASYQAFA--TLGGQALSFKIQSYSTKETIIA 245 (266)
Q Consensus 171 ~i~~~v~--sn~~w~~v~v~n~~G~~~I~sVeV~~~-~~~W~~m~r~~g~~W~~~~--~l~g~p~s~RvTs~~~G~~i~~ 245 (266)
+|+|+|+ |++||++|+|.|++ ++|++||||++ .+.|++|+|+||++|+++. +|.| ||+||||+.+ |+++++
T Consensus 3 ~i~F~V~~gs~~~~l~vlv~nv~--gdI~~V~ik~~~~~~W~~M~r~wGa~W~~~~~~~L~G-plSfRvt~~~-G~~~v~ 78 (96)
T 1bmw_A 3 KVTFTVEKGSNEKHLAVLVKYEG--DTMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQG-PFNFRFLTEK-GMKNVF 78 (96)
T ss_dssp CCCCCCCTTCSSSBCCBCCCCSS--SCCCCCEECCSSSSSCEECBCCSSSSBBCBCCSSCCC-CCCBCCEETT-TEECCB
T ss_pred CEEEEEecCCCCceEEEEEEEeC--CCEEEEEEEECCCCcEEECccCcCceeEeCCCCCCCC-CEEEEEEEcC-CcEEEE
Confidence 7999998 99999999999998 89999999995 4579999999999999987 6777 9999999998 999999
Q ss_pred ceeeCCCCCCCcEEecCc
Q 024520 246 YNVAPANWNVGLTYKSNV 263 (266)
Q Consensus 246 ~~viP~~w~~G~ty~~~~ 263 (266)
.||||++|++|+||++++
T Consensus 79 ~nViP~~W~~G~ty~~~~ 96 (96)
T 1bmw_A 79 DDVVPEKYTIGATYAPEE 96 (96)
T ss_dssp SSCSCSSCCSSSCCCC--
T ss_pred eeEeCCCCCCCCEEeCCC
Confidence 999999999999999863
No 8
>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A
Probab=99.67 E-value=3.8e-17 Score=131.24 Aligned_cols=104 Identities=19% Similarity=0.313 Sum_probs=73.0
Q ss_pred eEEEEEE--eCCC-CCCC----CCccccCCCCCCCCCC----CCeEEEechhcc-CCCCcCCceEEEEeCCCCcccCCCC
Q 024520 41 RLAHATF--YGDE-SASE----TMGGACGYGNLFSNGY----GTDTAALSSTLF-NNGYACGTCYQIKCYNSPHCYKYVP 108 (266)
Q Consensus 41 ~~g~aT~--Yg~~-~~~g----~~~GACGyg~~~~~~~----~~~~aA~s~~~~-~~g~~CG~C~ev~c~~~~~C~~~~~ 108 (266)
..-|||| |.+. ..+. +..++|+--+. ..|. ...-.|+..++. +++..||+|++|++.. +++
T Consensus 4 ~~~~~ty~~y~~~~~~~~~~~~~~s~~C~t~da-~~~~~~~~~y~wtA~~g~~gp~~g~~CG~cv~Vtn~~------nGk 76 (125)
T 1bw3_A 4 NDVRATYHYYRPAQNNWDLGAPAVSAYCATWDA-SKPLSWRSKYGWTAFCGPAGPRGQAACGKCLRVTNPA------TGA 76 (125)
T ss_dssp EEEEEECCCSSCGGGTTCTTSTTTCCTTHHHHT-TSCHHHHHHSCCEESCSTTCCCSGGGTTCEEEEEETT------TTE
T ss_pred cceEEEEEEecCCCcCcccccceeeEeeecccC-CCceeEecCCCceEeccCCCCCCCcccCCEEEeEeCC------CCC
Confidence 4568884 5442 1121 24589986221 1111 011123333333 7789999999999843 468
Q ss_pred eEEEEEecCCCCCCCCCCCCCCCCCCCCCceeeC-hHHHHhhcc----ccCCeeEEEEEEeecC
Q 024520 109 FTTVTATNLCPPNWSQDSNNGGWCNPPRAHFDMS-KPAFMKIGA----WKAGIVPVLFRRVPCI 167 (266)
Q Consensus 109 sv~V~itD~CP~~~~~~~~~~~~C~~~~~hfDLs-~~AF~~ia~----~~~G~v~i~~r~V~C~ 167 (266)
+|+|+|+|+||. | +|||| +.||++|+. ...|+++|+|++|+|+
T Consensus 77 sV~V~VvD~CP~-----------g-----gLDLS~~~AF~~Ia~~g~G~~~G~i~V~w~~V~C~ 124 (125)
T 1bw3_A 77 QITARIVDQCAN-----------G-----GLDLDWDTVFTKIDTNGIGYQQGHLNVNYQFVDCR 124 (125)
T ss_dssp EEEEEEEECCSS-----------S-----SCCSCSSSSHHHHCSSCHHHHHSEEEEEEEEECCC
T ss_pred EEEEEEEEeCCC-----------C-----CCCCCCHHHHHHHhccCCcccCcEEEEEEEEEeCC
Confidence 999999999996 4 49999 999999998 7899999999999997
No 9
>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}
Probab=99.28 E-value=3.7e-11 Score=92.03 Aligned_cols=92 Identities=20% Similarity=0.255 Sum_probs=73.4
Q ss_pred eEEEEEEeCCC-CCCCCCccccCCCCCCCCCCCCeEEEechhccCCCCcCCceEEEEeCCCCcccCCCCeEEEEEecCCC
Q 024520 41 RLAHATFYGDE-SASETMGGACGYGNLFSNGYGTDTAALSSTLFNNGYACGTCYQIKCYNSPHCYKYVPFTTVTATNLCP 119 (266)
Q Consensus 41 ~~g~aT~Yg~~-~~~g~~~GACGyg~~~~~~~~~~~aA~s~~~~~~g~~CG~C~ev~c~~~~~C~~~~~sv~V~itD~CP 119 (266)
..|.|+|||.. .+ ...|||-... ...|+||-.+ ..||...+|+... ++++|+|+|.|+||
T Consensus 2 ~~G~ASwYg~~f~G---~~TA~Ge~~~----~~~~tAAH~t------lP~gt~vrVtNl~------nGksVvVrVnDRGP 62 (95)
T 4avr_A 2 DTGEASYYGSRHAG---LRTASGERYN----PNAMTAAHRT------LPFGARVRVTNLD------NRRSVVVRINDRGP 62 (95)
T ss_dssp EEEEEEECCGGGTT---SBCTTSCBCC----TTSCEEECSS------SCTTCEEEEEETT------TCCEEEEEEEECCC
T ss_pred CEEEEEEECCccCC---CCCCCccCcC----CCCCEEEcCC------CCCCcEEEEEECC------CCcEEEEEEccCCC
Confidence 47999999974 22 2578874332 2357888763 4799999999643 67899999999999
Q ss_pred CCCCCCCCCCCCCCCCCCceeeChHHHHhhccccCCeeEEEEEEe
Q 024520 120 PNWSQDSNNGGWCNPPRAHFDMSKPAFMKIGAWKAGIVPVLFRRV 164 (266)
Q Consensus 120 ~~~~~~~~~~~~C~~~~~hfDLs~~AF~~ia~~~~G~v~i~~r~V 164 (266)
. |. ...+|||+.||++|+..+.|+.+|+|+.+
T Consensus 63 ~-----------~~--griIDLS~aAa~~Lg~~~~G~~~V~ve~~ 94 (95)
T 4avr_A 63 F-----------RR--GRIIDVSRKAAEGLGMIRSGVAPVRIESL 94 (95)
T ss_dssp C-----------ST--TEEEEECHHHHHHHTCTTTSCEEEEEEEC
T ss_pred C-----------CC--CCEEEeCHHHHHHhCCcCCCEEEEEEEEe
Confidence 7 65 36899999999999999999999999976
No 10
>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}
Probab=98.04 E-value=1.9e-05 Score=62.83 Aligned_cols=68 Identities=24% Similarity=0.324 Sum_probs=53.1
Q ss_pred eEEEech-hccCCCCcCCceEEEEeCCCCcccCCCCeEEEEEecCCCCCCCCCCCCCCCCCCCCCceeeChHHHHhhcc-
Q 024520 74 DTAALSS-TLFNNGYACGTCYQIKCYNSPHCYKYVPFTTVTATNLCPPNWSQDSNNGGWCNPPRAHFDMSKPAFMKIGA- 151 (266)
Q Consensus 74 ~~aA~s~-~~~~~g~~CG~C~ev~c~~~~~C~~~~~sv~V~itD~CP~~~~~~~~~~~~C~~~~~hfDLs~~AF~~ia~- 151 (266)
+|.+... +-|++ ..||.|+||+-.. .+++|.|..+|.=+ ..|+|+.+||+.|.+
T Consensus 45 FIGg~~~V~gwnS-~~CGtC~~lty~~------~g~si~vlaID~a~-----------------~Gfnis~~Amn~LT~G 100 (122)
T 3sul_A 45 YVGAVDTITGWNS-ESCGTCYQITWSG------TGKTIHVVGVDVAG-----------------NGFNVGQRAMDDLTNG 100 (122)
T ss_dssp EEEEETTCCSTTC-TTTTCEEEEEETT------TTEEEEEEEEEECS-----------------SSEEECHHHHHHHHTS
T ss_pred ccccccccccCCC-CCCCceEEEEEcC------CCcEEEEEEEecCC-----------------CceeehHHHHHHhcCC
Confidence 3655544 44655 9999999999521 25799999999844 359999999999975
Q ss_pred --ccCCeeEEEEEEee
Q 024520 152 --WKAGIVPVLFRRVP 165 (266)
Q Consensus 152 --~~~G~v~i~~r~V~ 165 (266)
...|+|+++|++|+
T Consensus 101 ~a~~lG~V~a~~~qV~ 116 (122)
T 3sul_A 101 QAVALGNIDVTATLVD 116 (122)
T ss_dssp CHHHHSEEEEEEEEEC
T ss_pred cceecceEeEEEEEcC
Confidence 24599999999996
No 11
>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}
Probab=98.00 E-value=1.7e-05 Score=63.57 Aligned_cols=67 Identities=19% Similarity=0.351 Sum_probs=54.1
Q ss_pred eEEEech-hccCCCCcCCceEEEEeCCCCcccCCCCeEEEEEecCCCCCCCCCCCCCCCCCCCCCceeeChHHHHhhcc-
Q 024520 74 DTAALSS-TLFNNGYACGTCYQIKCYNSPHCYKYVPFTTVTATNLCPPNWSQDSNNGGWCNPPRAHFDMSKPAFMKIGA- 151 (266)
Q Consensus 74 ~~aA~s~-~~~~~g~~CG~C~ev~c~~~~~C~~~~~sv~V~itD~CP~~~~~~~~~~~~C~~~~~hfDLs~~AF~~ia~- 151 (266)
++.+... .-|+ ...||.|+||+-. ++++|.|..+|.=+ ..|+++.+||+.|..
T Consensus 51 ~IGga~~iagWN-S~~CGtC~~lty~-------ng~sI~vlaID~A~-----------------~gFnIs~~Amn~LT~G 105 (129)
T 2kqa_A 51 NVGGIPDIAGWD-SPSCGTCWKVTIP-------NGNSIFIRGVDSGR-----------------GGFNVNPTAFTKLVGS 105 (129)
T ss_dssp SEEEETTCCSTT-CTTCSCEEEEEET-------TTEEEEEEEEEECS-----------------SSEEECHHHHHHHHSS
T ss_pred eeccchhhccCC-CCCCCceEEEEEc-------CCCEEEEEEEccCC-----------------CceeehHHHHHHhcCC
Confidence 4555554 3466 6999999999952 45799999999844 469999999999977
Q ss_pred ccCCee-EEEEEEee
Q 024520 152 WKAGIV-PVLFRRVP 165 (266)
Q Consensus 152 ~~~G~v-~i~~r~V~ 165 (266)
...|+| +++|++|+
T Consensus 106 ~~lG~V~~a~~~qV~ 120 (129)
T 2kqa_A 106 TEAGRVDNVNYVQVD 120 (129)
T ss_dssp SSSCCBCSCEEEECC
T ss_pred cccCcEeEEEEEEcC
Confidence 678999 99999996
No 12
>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}
Probab=97.98 E-value=1.6e-05 Score=63.17 Aligned_cols=66 Identities=20% Similarity=0.332 Sum_probs=52.0
Q ss_pred eEEEech-hccCCCCcCCceEEEEeCCCCcccCCCCeEEEEEecCCCCCCCCCCCCCCCCCCCCCceeeChHHHHhhcc-
Q 024520 74 DTAALSS-TLFNNGYACGTCYQIKCYNSPHCYKYVPFTTVTATNLCPPNWSQDSNNGGWCNPPRAHFDMSKPAFMKIGA- 151 (266)
Q Consensus 74 ~~aA~s~-~~~~~g~~CG~C~ev~c~~~~~C~~~~~sv~V~itD~CP~~~~~~~~~~~~C~~~~~hfDLs~~AF~~ia~- 151 (266)
+|.+... .-|+ ...||.|+||+- ++++|.|..+|.=+ ..|+|+.+||+.|..
T Consensus 45 ~IGg~~~i~gwn-s~~CGtC~~lty--------~g~si~vlaID~a~-----------------~Gfnis~~A~n~LT~G 98 (120)
T 3m3g_A 45 YIGGAAAVAGWN-SASCGTCWKLQY--------SGHTIYVLAVDHAA-----------------SGFNIALDAMNALTGG 98 (120)
T ss_dssp SEEEETTCCSTT-CTTTTCEEEEEE--------TTEEEEEEEEEECS-----------------SSEEECHHHHHHHHTS
T ss_pred ccccccccccCC-CCCCCceEEEEE--------CCeEEEEEEEecCC-----------------CceeecHHHHHHhhCC
Confidence 4555543 3464 488999999994 45799999999744 469999999999975
Q ss_pred --ccCCeeEEEEEEee
Q 024520 152 --WKAGIVPVLFRRVP 165 (266)
Q Consensus 152 --~~~G~v~i~~r~V~ 165 (266)
...|+|+++|++|+
T Consensus 99 ~a~~lG~V~a~~~~V~ 114 (120)
T 3m3g_A 99 QAVQLGRVSATATQVP 114 (120)
T ss_dssp CHHHHCEEECEEEEEC
T ss_pred cceeeeeEeEEEEEcC
Confidence 24599999999996
No 13
>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=97.86 E-value=1.9e-05 Score=63.32 Aligned_cols=71 Identities=24% Similarity=0.302 Sum_probs=51.8
Q ss_pred eEEEech-hccCCCCcCCceEEEEeCCCCcccCCCCeEEEEEecCCCCCCCCCCCCCCCCCCCCCceeeChHHHHhhcc-
Q 024520 74 DTAALSS-TLFNNGYACGTCYQIKCYNSPHCYKYVPFTTVTATNLCPPNWSQDSNNGGWCNPPRAHFDMSKPAFMKIGA- 151 (266)
Q Consensus 74 ~~aA~s~-~~~~~g~~CG~C~ev~c~~~~~C~~~~~sv~V~itD~CP~~~~~~~~~~~~C~~~~~hfDLs~~AF~~ia~- 151 (266)
+|.+... .-|+ ...||.|+||+-.++. ...++|.|..+|.=+ ..|+|+.+||+.|.+
T Consensus 45 ~IGg~~~i~gwn-s~~CGtC~~lty~g~~---~~~~si~vlaID~a~-----------------~Gfnis~~Amn~LT~g 103 (127)
T 3suj_A 45 CIGGSSDIAGYN-SPNCGSCYQLTYSSAH---TTPKSIYMVAIDRSA-----------------EGFTASKQAMDDLTNK 103 (127)
T ss_dssp SEEEETTCCSTT-CTTTTCEEEEEECCSS---SCCEEEEEEEEEECS-----------------SSEEECHHHHHHHHTS
T ss_pred eeccccccccCC-CCCCCceEEEEECCCC---CcceEEEEEEEecCC-----------------CceeecHHHHHHhcCC
Confidence 3554443 3464 4889999999953210 011699999999854 359999999999975
Q ss_pred --ccCCeeEEEEEEee
Q 024520 152 --WKAGIVPVLFRRVP 165 (266)
Q Consensus 152 --~~~G~v~i~~r~V~ 165 (266)
...|+|+++|++|+
T Consensus 104 ~a~~lG~V~~~~~~V~ 119 (127)
T 3suj_A 104 RAEELGTVNVDVRKVD 119 (127)
T ss_dssp CHHHHSSEEEEEEEEC
T ss_pred ccccceeEEEEEEEeC
Confidence 24589999999996
No 14
>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=97.79 E-value=4.1e-05 Score=61.23 Aligned_cols=70 Identities=23% Similarity=0.323 Sum_probs=52.6
Q ss_pred eEEEech-hccCCCCcCCceEEEEeCCCCcccCCCCeEEEEEecCCCCCCCCCCCCCCCCCCCCCceeeChHHHHhhcc-
Q 024520 74 DTAALSS-TLFNNGYACGTCYQIKCYNSPHCYKYVPFTTVTATNLCPPNWSQDSNNGGWCNPPRAHFDMSKPAFMKIGA- 151 (266)
Q Consensus 74 ~~aA~s~-~~~~~g~~CG~C~ev~c~~~~~C~~~~~sv~V~itD~CP~~~~~~~~~~~~C~~~~~hfDLs~~AF~~ia~- 151 (266)
+|.+... .-||+ ..||.|+||+-.++ ...++|.|..+|.=+ ..|+|+.+||+.|.+
T Consensus 46 ~IGg~~~i~gwnS-~~CGtC~~lty~g~----~~~~si~vlaID~a~-----------------~Gfnis~~Amn~LT~G 103 (125)
T 3suk_A 46 HIGASSDIGGFNS-PACGNCYTISFTFQ----GVTRSINLVAIDHAG-----------------NGFNVAQAAMDELTNG 103 (125)
T ss_dssp SEEEETTCCSTTC-TTTTCEEEEEEEET----TEEEEEEEEEEEECS-----------------SSEEECHHHHHHHHTS
T ss_pred eeccccccccCCC-CCCCeeEEEEEcCC----CcceEEEEEEEecCC-----------------CceeecHHHHHHhcCC
Confidence 4555544 44654 88999999996322 012799999999744 459999999999976
Q ss_pred --ccCCeeEEEEEEee
Q 024520 152 --WKAGIVPVLFRRVP 165 (266)
Q Consensus 152 --~~~G~v~i~~r~V~ 165 (266)
...|+|+++|++|+
T Consensus 104 ~a~~lG~V~~~~~~V~ 119 (125)
T 3suk_A 104 NAVALGTIDVQSQQVA 119 (125)
T ss_dssp CHHHHCEEEEEEEEEC
T ss_pred cccccceEeEEEEEcC
Confidence 34599999999996
No 15
>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}
Probab=97.67 E-value=0.00014 Score=58.57 Aligned_cols=65 Identities=14% Similarity=0.186 Sum_probs=50.9
Q ss_pred eEEEechhccCCCCcCCceEEEEeCCCCcccCCCCeEEEEEecCCCCCCCCCCCCCCCCCCCCCceeeChHHHHhhccc-
Q 024520 74 DTAALSSTLFNNGYACGTCYQIKCYNSPHCYKYVPFTTVTATNLCPPNWSQDSNNGGWCNPPRAHFDMSKPAFMKIGAW- 152 (266)
Q Consensus 74 ~~aA~s~~~~~~g~~CG~C~ev~c~~~~~C~~~~~sv~V~itD~CP~~~~~~~~~~~~C~~~~~hfDLs~~AF~~ia~~- 152 (266)
+|.+.. | +...||.|+||+- ++++|.|..+|.=.+ ..-|||+.+||+.|..-
T Consensus 49 ~igg~~---w-ns~~CGtCwkLtY--------~G~sI~vlaID~a~~---------------g~~FnIs~~Amn~LT~G~ 101 (136)
T 3sum_A 49 HFVAAP---E-AQTECGSCWKLRY--------KGNHAFVTVVDRVEE---------------ANLFVGGTDLVKNLTTFN 101 (136)
T ss_dssp SEEECC---B-TTBCTTCEEEEEE--------TTEEEEEEEEECCCS---------------TTEEEECHHHHHHHTCBT
T ss_pred cccccc---c-CCCCCCceEEEEE--------CCeEEEEEEEecCCC---------------cceEeehHHHHHHHhCCC
Confidence 455555 5 4588999999994 457999999997442 11399999999999752
Q ss_pred ------cCCeeEE-EEEEee
Q 024520 153 ------KAGIVPV-LFRRVP 165 (266)
Q Consensus 153 ------~~G~v~i-~~r~V~ 165 (266)
..|+|++ +|++|+
T Consensus 102 ~a~~a~elG~Vda~~~~qVd 121 (136)
T 3sum_A 102 GAPEGYDWGTAQLFSAYQVD 121 (136)
T ss_dssp TBCHHHHHSEEECSEEEEEC
T ss_pred ccccceecceeeeeEEEEcC
Confidence 3599999 999997
No 16
>2eng_A Endoglucanase V; cellulose degradation, hydrolase (endoglucanase), glycosidase; 1.50A {Humicola insolens} SCOP: b.52.1.1 PDB: 3eng_A* 4eng_A* 1hd5_A 1oa7_A* 1oa9_A 1l8f_A
Probab=94.66 E-value=0.022 Score=48.87 Aligned_cols=53 Identities=25% Similarity=0.248 Sum_probs=33.7
Q ss_pred EEEechhccCCCCcCCceEEEEeCCCCcccCCCCeEEEEEecCCCCCCCCCCCCCCCCCCCCCceeeCh
Q 024520 75 TAALSSTLFNNGYACGTCYQIKCYNSPHCYKYVPFTTVTATNLCPPNWSQDSNNGGWCNPPRAHFDMSK 143 (266)
Q Consensus 75 ~aA~s~~~~~~g~~CG~C~ev~c~~~~~C~~~~~sv~V~itD~CP~~~~~~~~~~~~C~~~~~hfDLs~ 143 (266)
+||.+-.--.....|++|||++=++.. ..+|+.+|+||+.... = ..+||||..
T Consensus 72 FaA~~~~g~~e~~~Cc~C~~LtFt~~~---~~GKkmiVQ~TNtG~D-----------l--~~n~FDl~i 124 (210)
T 2eng_A 72 FAATSIAGSNEAGWCCACYELTFTSGP---VAGKKMVVQSTSTGGD-----------L--GSNHFDLNI 124 (210)
T ss_dssp EEEEECTTCCHHHHTTCEEEEEECSGG---GTTCEEEEEEEEC------------------CCEEEEEC
T ss_pred eeeeeccCCccccccceeEEEEEcCCC---cCCCEEEEEEecccCC-----------C--CCCceeEec
Confidence 566652211224679999999976532 2468999999998764 1 258999964
No 17
>3nrl_A Uncharacterized protein rumgna_01417; beta protein, structural genomics, PSI-2, protein structure initiative; 1.90A {Ruminococcus gnavus}
Probab=50.75 E-value=16 Score=26.57 Aligned_cols=20 Identities=30% Similarity=0.863 Sum_probs=15.6
Q ss_pred echhccCCCCcCCceEEEEe
Q 024520 78 LSSTLFNNGYACGTCYQIKC 97 (266)
Q Consensus 78 ~s~~~~~~g~~CG~C~ev~c 97 (266)
.+..-|..|..||.|+||.-
T Consensus 22 ~~~~~~ygGlHCGE~feV~v 41 (81)
T 3nrl_A 22 FDLESFYGGLHCGECFDVKV 41 (81)
T ss_dssp EETTEECCCCCTTCEEEEEE
T ss_pred eccccccCCcccccEEEEEE
Confidence 33445678999999999985
No 18
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=28.45 E-value=1.1e+02 Score=22.48 Aligned_cols=46 Identities=11% Similarity=0.046 Sum_probs=29.3
Q ss_pred CcceEEEEEEecCcc-eEEccCCCCceEEeccCCCCC-ceEEEEEEccCCeE
Q 024520 193 GGDIASMWVKGTRTG-WISMSHNWGASYQAFATLGGQ-ALSFKIQSYSTKET 242 (266)
Q Consensus 193 ~~~I~sVeV~~~~~~-W~~m~r~~g~~W~~~~~l~g~-p~s~RvTs~~~G~~ 242 (266)
++.|.+||+.-.+.. .....+.|.-.|... .|. .|..|.|+.. |++
T Consensus 29 dg~V~kVef~vdg~~vg~dt~apy~~~w~~~---~G~htl~a~AtD~~-G~~ 76 (98)
T 3pe9_A 29 DGKISRVDFLVDGEVIGSDREAPYEYEWKAV---EGNHEISVIAYDDD-DAA 76 (98)
T ss_dssp SSCEEEEEEEETTEEEEEECSSSEEEEEECC---SEEEEEEEEEEETT-CCB
T ss_pred CCCEEEEEEEECCEEecccccCCEEEEEEcC---CccEEEEEEEEECC-CCE
Confidence 357999999987652 445556655567654 221 4666668877 654
No 19
>2kct_A Cytochrome C-type biogenesis protein CCME; solution structure, heme chaperone, cytochrome C biogenesis, OB-fold domain, NESG, PSI-2; NMR {Desulfovibrio vulgaris str}
Probab=27.69 E-value=49 Score=24.49 Aligned_cols=30 Identities=10% Similarity=0.384 Sum_probs=21.5
Q ss_pred ceEEEEEEccC-Ce--EEEEceeeCCCCCCCcE
Q 024520 229 ALSFKIQSYST-KE--TIIAYNVAPANWNVGLT 258 (266)
Q Consensus 229 p~s~RvTs~~~-G~--~i~~~~viP~~w~~G~t 258 (266)
-++|+||+.++ ++ .|++..++|..++.|+-
T Consensus 30 ~v~F~vtD~~~~~~~v~V~Y~GilPDlFrEGqg 62 (94)
T 2kct_A 30 GVRFRLEDKDNTSKTVWVLYKGAVPDTFKPGVE 62 (94)
T ss_dssp EEEEEEECSSCTTCEEEEEEESCCCTTCCTTCE
T ss_pred EEEEEEEcCCCCCcEEEEEECCCCCccccCCCe
Confidence 58999998621 33 34556899999998863
No 20
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=22.92 E-value=49 Score=24.51 Aligned_cols=27 Identities=26% Similarity=0.395 Sum_probs=21.2
Q ss_pred cccCCeeEEEEEEeecCC---CCCeeEEEc
Q 024520 151 AWKAGIVPVLFRRVPCIK---PGGIRFAFQ 177 (266)
Q Consensus 151 ~~~~G~v~i~~r~V~C~~---~g~i~~~v~ 177 (266)
.+..|.+.|+||.|+=+- .|.+.|.|+
T Consensus 73 ~L~~G~YtV~WrvvS~DGH~~~G~~~FtV~ 102 (102)
T 2c9r_A 73 PLTAGTYKVDWRAVSSDTFPITGSVTFKVK 102 (102)
T ss_dssp CCCSEEEEEEEEECCTTCCCEEEEEEEEEC
T ss_pred CCCCceEEEEEEEEecCCCccCCEEEEEEC
Confidence 467899999999999773 457777764
No 21
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=21.82 E-value=52 Score=24.50 Aligned_cols=27 Identities=26% Similarity=0.348 Sum_probs=21.1
Q ss_pred cccCCeeEEEEEEeecCC---CCCeeEEEc
Q 024520 151 AWKAGIVPVLFRRVPCIK---PGGIRFAFQ 177 (266)
Q Consensus 151 ~~~~G~v~i~~r~V~C~~---~g~i~~~v~ 177 (266)
.+..|.+.|+||.|+=+- .|.+.|.|+
T Consensus 75 ~L~~G~YtV~WrvvS~DGH~~~G~~~FtV~ 104 (104)
T 1lyq_A 75 PLPAGTYRVDWRAVSSDTHPITGNYTFTVK 104 (104)
T ss_dssp CCCSEEEEEEEEECCTTSCCEEEEEEEEEC
T ss_pred CCCCceEEEEEEEEecCCCccCCEEEEEEC
Confidence 467899999999999773 457777764
No 22
>1sr3_A APO-CCME; OB fold, beta barrel, flexible C-terminal domain, chaperone; NMR {Escherichia coli} SCOP: b.40.9.1
Probab=21.47 E-value=71 Score=25.30 Aligned_cols=30 Identities=13% Similarity=0.189 Sum_probs=21.4
Q ss_pred ceEEEEEEccCCeEEEEceeeCCCCCCCcE
Q 024520 229 ALSFKIQSYSTKETIIAYNVAPANWNVGLT 258 (266)
Q Consensus 229 p~s~RvTs~~~G~~i~~~~viP~~w~~G~t 258 (266)
.++|+||+...--.|++..++|..|+-|+-
T Consensus 50 ~v~F~vtD~~~~v~V~Y~GilPDlFrEGqg 79 (136)
T 1sr3_A 50 KVTFTIYDAEGSVDVSYEGILPDLFREGQG 79 (136)
T ss_dssp EEEEEEECSSCEEEEEEESCCCTTCCTTSE
T ss_pred EEEEEEEeCCcEEEEEECCCCCccccCCCe
Confidence 588999986512345557899999988763
No 23
>2a9d_A Sulfite oxidase; molybdopterin, molybdenum, oxidoreductase; HET: MTE; 1.70A {Gallus gallus} SCOP: b.1.18.6 d.176.1.1 PDB: 2a9a_A* 2a99_A* 2a9b_A* 2a9c_A*
Probab=21.25 E-value=1.4e+02 Score=27.37 Aligned_cols=24 Identities=17% Similarity=0.228 Sum_probs=17.8
Q ss_pred ecCCCcceEEEEEEecCc-ceEEcc
Q 024520 189 NVAGGGDIASMWVKGTRT-GWISMS 212 (266)
Q Consensus 189 n~~G~~~I~sVeV~~~~~-~W~~m~ 212 (266)
..+|..+|+.|||...++ +|+...
T Consensus 278 ~sGgg~~I~rVEVS~DgG~tW~~A~ 302 (372)
T 2a9d_A 278 WSGGGREVVRVDVSLDGGRTWKVAR 302 (372)
T ss_dssp ECSTTCCEEEEEEESBSSSSCEECE
T ss_pred EcCCCCCEEEEEEEcCCCCcceEeE
Confidence 344435799999999877 798555
No 24
>1ogp_A Sulfite oxidase; oxidoreductase, molybdenum cofactor, molybdopterin, peroxisomes, intramolecular electron transfer, oxidoreductas; HET: MTQ; 2.60A {Arabidopsis thaliana} SCOP: b.1.18.6 d.176.1.1
Probab=21.18 E-value=1e+02 Score=28.43 Aligned_cols=24 Identities=21% Similarity=0.361 Sum_probs=18.5
Q ss_pred ecCCCcceEEEEEEecCc-ceEEcc
Q 024520 189 NVAGGGDIASMWVKGTRT-GWISMS 212 (266)
Q Consensus 189 n~~G~~~I~sVeV~~~~~-~W~~m~ 212 (266)
..+|...|+.|||...++ +|+...
T Consensus 291 ~sGgg~~I~rVEVS~DgG~tW~~A~ 315 (393)
T 1ogp_A 291 VSGGGRGIERVDISLDGGKNWVEAS 315 (393)
T ss_dssp ECSTTCCEEEEEEESSTTSSCEECE
T ss_pred EcCCCCCEEEEEEEcCCCCCceEee
Confidence 445457899999999877 798554
No 25
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=20.96 E-value=98 Score=29.61 Aligned_cols=41 Identities=10% Similarity=0.131 Sum_probs=29.7
Q ss_pred EEEEEecCc-ceEEccCCCCceEEeccCCCCCceEEEEEEcc
Q 024520 198 SMWVKGTRT-GWISMSHNWGASYQAFATLGGQALSFKIQSYS 238 (266)
Q Consensus 198 sVeV~~~~~-~W~~m~r~~g~~W~~~~~l~g~p~s~RvTs~~ 238 (266)
.||.+..++ .|+...+.....|.+.+...+..+.|||...+
T Consensus 45 ~vE~~~~~~~~W~~v~~~~~t~~~V~~L~~g~~Y~FRV~A~N 86 (573)
T 3uto_A 45 TIEKREAMGGSWSPCAKSRYTYTTIEGLRAGKQYEFRIIAEN 86 (573)
T ss_dssp EEEEEESSSCCCEEEEEESSSEEEECCCCTTCEEEEEEEEEE
T ss_pred EEEEEECCCCceEEeccccCCEEEeCCCCCCCcEeEEEEEEc
Confidence 456666555 58887776667788877656668999998755
No 26
>2blf_A SORA, sulfite\:cytochrome C oxidoreductase subunit A; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_A* 2c9x_A* 2ca3_A* 2ca4_A*
Probab=20.06 E-value=1e+02 Score=28.35 Aligned_cols=50 Identities=18% Similarity=0.314 Sum_probs=30.0
Q ss_pred CCCcceEEEEEEecCc-ceEEccCC-----CC-ceEEeccCCCCCc--eEEEEEEccCCe
Q 024520 191 AGGGDIASMWVKGTRT-GWISMSHN-----WG-ASYQAFATLGGQA--LSFKIQSYSTKE 241 (266)
Q Consensus 191 ~G~~~I~sVeV~~~~~-~W~~m~r~-----~g-~~W~~~~~l~g~p--~s~RvTs~~~G~ 241 (266)
+|...|+.|||...++ +|+...-. |- -.|++.-++..++ +.+|-|+.. |.
T Consensus 289 ~Gg~~I~rVEVS~DgG~tW~~A~l~~~~~~~~W~~W~~~~~~~~g~~~i~~RA~D~~-g~ 347 (373)
T 2blf_A 289 DGGYGITQVSVSADAGKSWTNATLDPGLGKYSFRGWKAVLPLTKGDHVLMCRATNAR-GE 347 (373)
T ss_dssp CSSSCEEEEEEESSTTSSCEECEECCCSCTTSCEEEEEEEEECSEEEEEEEEEEETT-SC
T ss_pred cCCCCEEEEEEEeCCCCCceEeEeCCCCCCCeEEEEEEEEEcCCCcEEEEEEEEcCC-CC
Confidence 4568999999999877 79854421 21 2566552222224 445667666 53
No 27
>1j6q_A Cytochrome C maturation protein E; all-beta protein, heme delivery,cytochrome C maturation, OB- (oligonucleotide binding)fold; NMR {Shewanella putrefaciens} SCOP: b.40.9.1 PDB: 1lm0_A
Probab=20.03 E-value=93 Score=24.56 Aligned_cols=30 Identities=10% Similarity=0.220 Sum_probs=21.9
Q ss_pred ceEEEEEE-ccCCeEEEEceeeCCCCCCCcE
Q 024520 229 ALSFKIQS-YSTKETIIAYNVAPANWNVGLT 258 (266)
Q Consensus 229 p~s~RvTs-~~~G~~i~~~~viP~~w~~G~t 258 (266)
.++|+||+ ...--.|++..++|..++-|+-
T Consensus 54 ~v~F~vtD~~~~~v~V~Y~GilPDlFrEGqg 84 (136)
T 1j6q_A 54 HVQFAVHDSLGGEILVTYDDLLPDLFREGQG 84 (136)
T ss_dssp CEEEEEECTTCCCEEEEECSCCTTSCCSSSE
T ss_pred EEEEEEEcCCCCEEEEEECCCCCccccCCCe
Confidence 58999999 4413445567899999988763
Done!