Query 024521
Match_columns 266
No_of_seqs 154 out of 1283
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 05:12:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024521.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024521hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 4.7E-73 1E-77 508.9 24.1 254 1-260 112-454 (454)
2 PLN02213 sinapoylglucose-malat 100.0 8.6E-64 1.9E-68 439.6 24.0 242 6-256 1-319 (319)
3 PLN02209 serine carboxypeptida 100.0 4.6E-63 1E-67 448.3 24.7 247 1-256 112-437 (437)
4 PF00450 Peptidase_S10: Serine 100.0 2.6E-64 5.7E-69 458.7 16.4 247 1-253 80-415 (415)
5 PLN03016 sinapoylglucose-malat 100.0 1.5E-62 3.2E-67 444.9 23.3 247 1-256 110-433 (433)
6 PTZ00472 serine carboxypeptida 100.0 6.9E-60 1.5E-64 432.2 22.4 251 1-257 116-462 (462)
7 KOG1283 Serine carboxypeptidas 100.0 4.3E-47 9.3E-52 318.2 13.0 246 1-251 66-411 (414)
8 COG2939 Carboxypeptidase C (ca 100.0 1.4E-40 3.1E-45 296.5 10.6 248 1-255 141-492 (498)
9 PLN02824 hydrolase, alpha/beta 99.4 1.3E-12 2.8E-17 113.7 9.0 61 164-253 233-293 (294)
10 TIGR03611 RutD pyrimidine util 99.4 4.2E-12 9.1E-17 106.8 10.6 60 164-252 197-256 (257)
11 PRK10673 acyl-CoA esterase; Pr 99.3 6E-12 1.3E-16 106.7 9.9 185 5-253 41-254 (255)
12 TIGR02240 PHA_depoly_arom poly 99.3 8.2E-12 1.8E-16 107.7 10.7 61 163-253 205-265 (276)
13 TIGR03056 bchO_mg_che_rel puta 99.3 2.9E-11 6.2E-16 103.4 13.8 60 164-252 219-278 (278)
14 PRK03204 haloalkane dehalogena 99.3 1.2E-11 2.7E-16 107.4 11.1 58 165-251 227-285 (286)
15 TIGR03343 biphenyl_bphD 2-hydr 99.3 2.8E-11 6.1E-16 104.1 13.2 61 163-252 221-281 (282)
16 PRK00870 haloalkane dehalogena 99.3 2.9E-11 6.3E-16 105.6 13.2 68 160-254 234-301 (302)
17 PLN02965 Probable pheophorbida 99.3 1.8E-11 3.9E-16 104.3 11.5 60 164-252 192-251 (255)
18 PHA02857 monoglyceride lipase; 99.3 3.1E-11 6.6E-16 103.9 11.7 63 163-253 207-272 (276)
19 PLN02679 hydrolase, alpha/beta 99.3 5.6E-11 1.2E-15 106.6 13.1 65 164-253 291-356 (360)
20 PRK10349 carboxylesterase BioH 99.2 1.7E-11 3.7E-16 104.3 7.7 63 161-252 192-254 (256)
21 TIGR01250 pro_imino_pep_2 prol 99.2 1.8E-10 3.8E-15 98.3 13.6 64 6-77 53-116 (288)
22 PRK03592 haloalkane dehalogena 99.2 4.2E-11 9.1E-16 104.2 9.8 65 164-256 227-291 (295)
23 TIGR02427 protocat_pcaD 3-oxoa 99.2 1E-10 2.2E-15 97.4 11.5 61 163-252 191-251 (251)
24 PLN02385 hydrolase; alpha/beta 99.2 1.3E-10 2.9E-15 103.7 12.6 64 164-254 278-345 (349)
25 PLN03084 alpha/beta hydrolase 99.2 2.7E-10 5.7E-15 102.8 13.2 59 165-253 325-383 (383)
26 PLN02578 hydrolase 99.2 2.6E-10 5.5E-15 102.1 12.3 65 4-79 110-174 (354)
27 PRK11126 2-succinyl-6-hydroxy- 99.2 1.8E-10 3.9E-15 96.9 9.8 60 6-77 27-86 (242)
28 PF12697 Abhydrolase_6: Alpha/ 99.2 1.1E-11 2.3E-16 101.6 2.2 64 5-77 23-86 (228)
29 TIGR01738 bioH putative pimelo 99.2 2.3E-10 5.1E-15 95.0 9.9 62 161-251 184-245 (245)
30 TIGR01607 PST-A Plasmodium sub 99.2 6E-10 1.3E-14 98.9 13.0 62 165-253 270-332 (332)
31 PLN02298 hydrolase, alpha/beta 99.1 8.6E-10 1.9E-14 97.6 13.3 64 163-253 249-316 (330)
32 PRK14875 acetoin dehydrogenase 99.1 5.5E-10 1.2E-14 100.0 10.9 62 160-253 309-370 (371)
33 TIGR03695 menH_SHCHC 2-succiny 99.1 8.2E-10 1.8E-14 91.7 10.5 60 163-252 192-251 (251)
34 PRK10749 lysophospholipase L2; 99.1 1.2E-09 2.6E-14 96.9 11.0 69 164-254 258-329 (330)
35 KOG1454 Predicted hydrolase/ac 99.1 3.1E-09 6.7E-14 93.9 13.0 60 165-253 264-323 (326)
36 PRK08775 homoserine O-acetyltr 99.0 1.3E-09 2.7E-14 97.2 9.5 62 165-254 277-339 (343)
37 PRK07581 hypothetical protein; 99.0 2.1E-09 4.5E-14 95.5 10.7 63 161-252 271-334 (339)
38 PRK06489 hypothetical protein; 99.0 5.1E-09 1.1E-13 93.9 11.0 61 163-253 290-356 (360)
39 TIGR01392 homoserO_Ac_trn homo 99.0 1.3E-08 2.8E-13 91.0 13.2 65 163-252 286-351 (351)
40 KOG4409 Predicted hydrolase/ac 99.0 4.4E-09 9.6E-14 91.2 9.6 72 5-83 115-186 (365)
41 PLN02894 hydrolase, alpha/beta 98.9 4.4E-09 9.5E-14 95.7 9.8 60 164-252 324-383 (402)
42 PLN03087 BODYGUARD 1 domain co 98.9 8.6E-09 1.9E-13 95.3 11.7 67 158-253 410-478 (481)
43 PLN02652 hydrolase; alpha/beta 98.9 1.4E-08 3.1E-13 92.1 11.1 63 164-253 323-386 (395)
44 PLN02980 2-oxoglutarate decarb 98.9 7.3E-09 1.6E-13 108.5 9.3 79 161-257 1564-1642(1655)
45 KOG4178 Soluble epoxide hydrol 98.8 6.6E-08 1.4E-12 83.5 12.4 67 6-81 71-137 (322)
46 PRK00175 metX homoserine O-ace 98.8 4.8E-08 1E-12 88.3 12.2 65 164-253 308-373 (379)
47 PLN02511 hydrolase 98.7 1.5E-08 3.2E-13 91.9 6.3 65 5-76 128-192 (388)
48 KOG1455 Lysophospholipase [Lip 98.7 8.2E-08 1.8E-12 82.0 9.9 162 7-190 83-271 (313)
49 COG2267 PldB Lysophospholipase 98.7 2E-07 4.2E-12 81.5 12.0 65 163-254 226-294 (298)
50 PLN02211 methyl indole-3-aceta 98.7 1.6E-07 3.6E-12 81.0 10.7 59 165-253 211-269 (273)
51 PF00561 Abhydrolase_1: alpha/ 98.7 1.5E-08 3.1E-13 83.9 3.6 57 163-248 173-229 (230)
52 TIGR01249 pro_imino_pep_1 prol 98.6 6.2E-07 1.3E-11 78.6 13.4 65 5-78 52-116 (306)
53 PRK05855 short chain dehydroge 98.6 2.7E-07 5.8E-12 87.4 11.3 63 5-75 50-112 (582)
54 PRK05077 frsA fermentation/res 98.6 4.8E-08 1E-12 89.3 5.8 184 5-253 221-411 (414)
55 PRK06765 homoserine O-acetyltr 98.6 3.8E-07 8.2E-12 82.6 11.1 71 159-254 317-388 (389)
56 PF00326 Peptidase_S9: Prolyl 98.5 6.3E-07 1.4E-11 74.2 8.5 190 4-252 12-207 (213)
57 TIGR03100 hydr1_PEP hydrolase, 98.5 3.9E-06 8.5E-11 72.5 13.0 62 6-75 57-118 (274)
58 PRK10566 esterase; Provisional 98.4 4.1E-06 9E-11 70.8 11.2 61 165-252 186-246 (249)
59 PRK13604 luxD acyl transferase 98.3 1.7E-05 3.8E-10 69.0 13.2 64 159-250 196-259 (307)
60 COG1506 DAP2 Dipeptidyl aminop 98.2 4.8E-06 1E-10 80.0 9.5 191 4-252 421-614 (620)
61 KOG2382 Predicted alpha/beta h 98.2 7.3E-06 1.6E-10 71.0 9.4 60 164-252 252-311 (315)
62 PRK10985 putative hydrolase; P 98.2 1.1E-05 2.4E-10 71.3 10.2 50 161-239 251-300 (324)
63 KOG1552 Predicted alpha/beta h 98.1 2.5E-05 5.4E-10 65.6 9.6 163 6-253 88-251 (258)
64 PRK11071 esterase YqiA; Provis 98.1 1.6E-05 3.5E-10 64.9 7.9 55 164-252 135-189 (190)
65 COG0596 MhpC Predicted hydrola 98.1 4.4E-05 9.5E-10 62.8 10.4 61 163-251 219-279 (282)
66 COG3208 GrsT Predicted thioest 98.0 4.7E-05 1E-09 63.5 10.0 188 7-252 34-234 (244)
67 KOG2564 Predicted acetyltransf 98.0 8.6E-05 1.9E-09 63.0 10.8 61 9-76 105-165 (343)
68 PRK11460 putative hydrolase; P 97.9 9.7E-05 2.1E-09 62.2 9.4 62 165-251 148-209 (232)
69 TIGR01838 PHA_synth_I poly(R)- 97.9 0.0002 4.2E-09 67.3 12.1 50 164-242 414-463 (532)
70 PLN02442 S-formylglutathione h 97.8 0.00029 6.4E-09 61.1 11.9 49 163-236 215-264 (283)
71 PF12695 Abhydrolase_5: Alpha/ 97.7 4.7E-05 1E-09 58.4 4.1 42 165-234 104-145 (145)
72 PF06500 DUF1100: Alpha/beta h 97.6 1.3E-05 2.8E-10 72.2 0.1 64 5-76 217-280 (411)
73 PLN02872 triacylglycerol lipas 97.6 0.00018 3.9E-09 65.3 7.5 60 165-252 325-387 (395)
74 COG1647 Esterase/lipase [Gener 97.6 0.00011 2.4E-09 60.3 5.4 62 165-253 181-243 (243)
75 KOG2984 Predicted hydrolase [G 97.5 0.00051 1.1E-08 55.8 7.2 60 165-253 216-275 (277)
76 TIGR02821 fghA_ester_D S-formy 97.4 0.0042 9.2E-08 53.5 12.8 49 165-238 211-260 (275)
77 PF02230 Abhydrolase_2: Phosph 97.2 0.00094 2E-08 55.4 6.6 59 165-252 155-213 (216)
78 PF10230 DUF2305: Uncharacteri 97.2 0.0024 5.1E-08 55.0 8.9 71 5-83 31-106 (266)
79 PF08386 Abhydrolase_4: TAP-li 97.1 0.0016 3.5E-08 47.6 6.4 65 165-258 34-98 (103)
80 TIGR03101 hydr2_PEP hydrolase, 97.0 0.0012 2.5E-08 56.8 4.8 64 6-77 56-119 (266)
81 COG0400 Predicted esterase [Ge 96.9 0.0087 1.9E-07 49.4 9.6 127 34-252 77-203 (207)
82 PRK05371 x-prolyl-dipeptidyl a 96.8 0.014 3E-07 57.6 11.4 30 163-192 453-482 (767)
83 PF03583 LIP: Secretory lipase 96.8 0.049 1.1E-06 47.5 13.6 68 165-258 219-289 (290)
84 TIGR01840 esterase_phb esteras 96.7 0.039 8.4E-07 45.5 12.2 28 167-194 170-197 (212)
85 TIGR03230 lipo_lipase lipoprot 96.6 0.005 1.1E-07 56.6 6.5 67 6-77 73-139 (442)
86 PF08840 BAAT_C: BAAT / Acyl-C 96.1 0.0077 1.7E-07 50.0 4.4 35 44-78 9-43 (213)
87 cd00707 Pancreat_lipase_like P 96.1 0.006 1.3E-07 52.7 3.7 70 5-79 65-134 (275)
88 COG2945 Predicted hydrolase of 95.8 0.052 1.1E-06 43.9 7.7 62 8-77 62-123 (210)
89 PF00975 Thioesterase: Thioest 95.7 0.013 2.9E-07 48.5 4.0 63 7-81 28-90 (229)
90 PF05677 DUF818: Chlamydia CHL 95.6 0.047 1E-06 48.1 7.0 60 5-72 170-230 (365)
91 PF05728 UPF0227: Uncharacteri 95.5 0.35 7.6E-06 39.3 11.7 24 55-78 57-80 (187)
92 TIGR03502 lipase_Pla1_cef extr 95.1 0.05 1.1E-06 53.4 6.4 71 6-77 476-575 (792)
93 TIGR00976 /NonD putative hydro 94.8 0.039 8.4E-07 52.5 4.7 65 5-76 52-116 (550)
94 PF01738 DLH: Dienelactone hyd 94.7 0.099 2.1E-06 43.2 6.3 49 163-236 143-191 (218)
95 KOG4627 Kynurenine formamidase 94.6 0.087 1.9E-06 43.2 5.6 44 32-77 113-156 (270)
96 cd00741 Lipase Lipase. Lipase 94.2 0.087 1.9E-06 41.0 4.7 44 35-81 9-52 (153)
97 PLN02733 phosphatidylcholine-s 93.9 0.12 2.5E-06 47.8 5.6 55 13-76 127-181 (440)
98 PF03096 Ndr: Ndr family; Int 93.9 0.19 4E-06 43.4 6.4 34 223-256 248-281 (283)
99 PF07519 Tannase: Tannase and 93.8 0.32 6.9E-06 45.4 8.2 78 158-254 346-427 (474)
100 KOG2100 Dipeptidyl aminopeptid 93.7 0.36 7.8E-06 47.7 8.8 186 7-257 559-749 (755)
101 PLN02454 triacylglycerol lipas 93.5 0.13 2.9E-06 46.7 5.0 47 34-81 206-252 (414)
102 TIGR01836 PHA_synth_III_C poly 93.3 0.16 3.4E-06 45.3 5.3 63 163-253 284-349 (350)
103 PF01764 Lipase_3: Lipase (cla 93.2 0.12 2.5E-06 39.4 3.8 44 36-82 46-89 (140)
104 PF10142 PhoPQ_related: PhoPQ- 93.1 2.1 4.6E-05 38.5 12.0 151 41-257 156-327 (367)
105 PLN02571 triacylglycerol lipas 93.0 0.19 4.1E-06 45.8 5.2 46 34-80 204-249 (413)
106 PF10503 Esterase_phd: Esteras 92.7 0.39 8.5E-06 40.1 6.4 28 165-192 169-196 (220)
107 PRK10115 protease 2; Provision 92.7 1.5 3.1E-05 43.1 11.3 28 165-192 605-633 (686)
108 smart00824 PKS_TE Thioesterase 92.5 0.49 1.1E-05 37.9 6.8 65 5-81 24-88 (212)
109 KOG4667 Predicted esterase [Li 92.4 3.1 6.7E-05 34.6 10.9 179 8-241 64-246 (269)
110 PF06028 DUF915: Alpha/beta hy 92.2 1.2 2.5E-05 38.2 8.8 65 164-254 183-255 (255)
111 PLN00021 chlorophyllase 92.1 0.41 8.9E-06 42.2 6.2 65 6-78 79-147 (313)
112 COG4757 Predicted alpha/beta h 92.0 2.8 6E-05 35.3 10.4 65 6-74 57-122 (281)
113 KOG2931 Differentiation-relate 91.9 3.7 8.1E-05 35.7 11.4 34 223-256 275-308 (326)
114 cd00519 Lipase_3 Lipase (class 91.8 0.25 5.4E-06 41.2 4.4 40 39-81 113-152 (229)
115 PF11288 DUF3089: Protein of u 91.7 0.27 5.8E-06 40.5 4.3 39 37-77 77-115 (207)
116 PF11144 DUF2920: Protein of u 91.4 0.29 6.3E-06 44.3 4.5 43 35-78 161-204 (403)
117 PF05448 AXE1: Acetyl xylan es 91.3 0.15 3.3E-06 45.1 2.5 55 165-247 262-317 (320)
118 KOG4391 Predicted alpha/beta h 91.2 0.2 4.4E-06 41.5 3.0 65 6-78 106-170 (300)
119 PF00151 Lipase: Lipase; Inte 90.9 0.05 1.1E-06 48.4 -0.9 71 5-80 103-173 (331)
120 PLN02719 triacylglycerol lipas 90.7 0.41 8.9E-06 44.6 4.9 48 34-81 273-322 (518)
121 PLN02753 triacylglycerol lipas 90.3 0.48 1E-05 44.3 4.9 49 32-80 285-335 (531)
122 PF05577 Peptidase_S28: Serine 89.6 0.39 8.5E-06 44.2 3.8 48 31-82 87-134 (434)
123 KOG2183 Prolylcarboxypeptidase 88.7 0.89 1.9E-05 41.2 5.2 67 6-75 111-185 (492)
124 PLN02408 phospholipase A1 88.7 0.78 1.7E-05 41.2 4.9 46 35-81 179-224 (365)
125 PLN02324 triacylglycerol lipas 88.2 0.91 2E-05 41.4 5.1 47 34-81 193-239 (415)
126 PF02129 Peptidase_S15: X-Pro 88.1 0.73 1.6E-05 39.5 4.3 64 6-76 57-120 (272)
127 PF05057 DUF676: Putative seri 88.1 1 2.2E-05 37.4 5.0 48 33-81 55-102 (217)
128 PRK10252 entF enterobactin syn 87.5 1.6 3.5E-05 45.7 7.2 65 5-81 1093-1157(1296)
129 TIGR01836 PHA_synth_III_C poly 87.3 1.2 2.7E-05 39.6 5.4 61 6-76 94-155 (350)
130 KOG3101 Esterase D [General fu 87.1 0.73 1.6E-05 38.1 3.4 17 54-70 138-154 (283)
131 KOG3253 Predicted alpha/beta h 86.9 1.1 2.4E-05 42.5 4.9 124 32-237 224-348 (784)
132 PLN00413 triacylglycerol lipas 86.9 0.74 1.6E-05 42.6 3.7 38 39-79 269-306 (479)
133 PRK10162 acetyl esterase; Prov 86.5 1.9 4.2E-05 37.9 6.2 60 166-252 249-313 (318)
134 PLN02934 triacylglycerol lipas 86.5 1.1 2.4E-05 41.8 4.6 39 38-79 305-343 (515)
135 KOG4569 Predicted lipase [Lipi 86.1 0.84 1.8E-05 40.7 3.7 43 38-83 155-197 (336)
136 PLN02761 lipase class 3 family 85.8 1.5 3.2E-05 41.1 5.1 47 34-80 268-317 (527)
137 PRK07868 acyl-CoA synthetase; 85.7 1.5 3.3E-05 44.9 5.6 61 164-253 296-360 (994)
138 PF07819 PGAP1: PGAP1-like pro 85.6 1.8 4E-05 36.1 5.3 33 37-69 63-97 (225)
139 PF06057 VirJ: Bacterial virul 85.5 1.2 2.7E-05 36.1 3.9 49 31-82 45-93 (192)
140 PLN02162 triacylglycerol lipas 85.5 1.1 2.4E-05 41.4 4.1 38 39-79 263-300 (475)
141 KOG2551 Phospholipase/carboxyh 85.0 2.8 6E-05 34.9 5.8 57 165-251 163-221 (230)
142 KOG1515 Arylacetamide deacetyl 84.9 2.7 5.8E-05 37.5 6.2 49 42-96 152-201 (336)
143 PF06821 Ser_hydrolase: Serine 83.7 1.7 3.6E-05 34.7 4.0 44 165-238 114-157 (171)
144 PLN02802 triacylglycerol lipas 83.5 1.7 3.7E-05 40.6 4.4 46 35-81 309-354 (509)
145 PLN02310 triacylglycerol lipas 83.1 1.8 3.9E-05 39.4 4.4 46 35-80 186-232 (405)
146 COG1073 Hydrolases of the alph 83.0 2.8 6.1E-05 35.3 5.5 61 166-253 233-296 (299)
147 COG2021 MET2 Homoserine acetyl 83.0 23 0.00049 31.9 11.0 69 158-253 299-367 (368)
148 PLN02847 triacylglycerol lipas 82.6 2 4.3E-05 40.9 4.5 35 42-79 239-273 (633)
149 PF05990 DUF900: Alpha/beta hy 82.5 2.4 5.2E-05 35.6 4.7 39 37-78 76-114 (233)
150 PLN03037 lipase class 3 family 82.1 2.1 4.7E-05 40.0 4.5 47 35-81 295-342 (525)
151 KOG2369 Lecithin:cholesterol a 80.2 2.1 4.5E-05 39.5 3.7 47 32-78 156-203 (473)
152 PF12146 Hydrolase_4: Putative 78.9 3.2 7E-05 28.5 3.6 38 5-45 42-79 (79)
153 PF11187 DUF2974: Protein of u 78.4 3.9 8.5E-05 34.2 4.6 35 41-79 72-106 (224)
154 KOG1838 Alpha/beta hydrolase [ 78.3 3.6 7.9E-05 37.4 4.6 50 14-69 161-210 (409)
155 KOG3724 Negative regulator of 76.8 3.3 7.1E-05 40.7 4.0 31 43-73 165-198 (973)
156 PF02450 LCAT: Lecithin:choles 76.6 3.5 7.6E-05 37.5 4.1 41 38-78 100-140 (389)
157 PF07859 Abhydrolase_3: alpha/ 76.4 1.6 3.4E-05 35.5 1.7 46 35-81 47-95 (211)
158 PRK04940 hypothetical protein; 75.8 5.2 0.00011 32.2 4.4 22 57-78 60-81 (180)
159 PF03959 FSH1: Serine hydrolas 75.4 1.6 3.4E-05 36.1 1.4 48 165-241 161-208 (212)
160 COG3319 Thioesterase domains o 74.4 12 0.00026 32.1 6.5 44 32-81 46-89 (257)
161 COG0429 Predicted hydrolase of 73.0 7.3 0.00016 34.5 4.9 38 38-81 132-169 (345)
162 KOG2281 Dipeptidyl aminopeptid 71.7 29 0.00063 33.7 8.8 41 153-193 790-830 (867)
163 PF10081 Abhydrolase_9: Alpha/ 71.3 5.9 0.00013 34.2 3.9 36 34-69 86-121 (289)
164 PF08237 PE-PPE: PE-PPE domain 71.1 11 0.00024 31.5 5.6 69 7-80 3-71 (225)
165 KOG3043 Predicted hydrolase re 70.4 14 0.0003 31.0 5.7 34 159-192 158-191 (242)
166 KOG3975 Uncharacterized conser 69.4 7.1 0.00015 33.3 3.9 44 148-191 224-268 (301)
167 PF10340 DUF2424: Protein of u 66.9 8.6 0.00019 34.7 4.2 28 55-82 193-220 (374)
168 COG3571 Predicted hydrolase of 66.2 8.5 0.00018 30.6 3.5 26 53-78 85-110 (213)
169 COG0657 Aes Esterase/lipase [L 66.1 27 0.00058 30.4 7.2 28 54-81 149-176 (312)
170 COG3509 LpqC Poly(3-hydroxybut 65.6 14 0.0003 32.3 5.0 68 170-241 213-282 (312)
171 PF06259 Abhydrolase_8: Alpha/ 64.6 17 0.00036 29.3 5.1 37 35-73 89-125 (177)
172 PF06342 DUF1057: Alpha/beta h 64.2 19 0.00041 31.3 5.6 217 7-251 63-296 (297)
173 KOG2565 Predicted hydrolases o 63.6 11 0.00025 33.9 4.2 64 7-80 189-252 (469)
174 COG0627 Predicted esterase [Ge 58.4 16 0.00036 32.2 4.4 62 15-78 106-173 (316)
175 KOG4540 Putative lipase essent 57.8 11 0.00023 32.8 3.0 33 44-76 263-295 (425)
176 COG5153 CVT17 Putative lipase 57.8 11 0.00023 32.8 3.0 33 44-76 263-295 (425)
177 COG1075 LipA Predicted acetylt 57.4 18 0.00038 32.2 4.5 44 33-79 106-149 (336)
178 COG0412 Dienelactone hydrolase 57.0 26 0.00055 29.5 5.2 42 34-76 90-131 (236)
179 KOG2182 Hydrolytic enzymes of 55.3 30 0.00065 32.4 5.6 46 31-80 146-191 (514)
180 PRK10439 enterobactin/ferric e 55.0 18 0.00039 33.2 4.2 20 57-76 288-307 (411)
181 KOG1553 Predicted alpha/beta h 54.5 38 0.00082 30.4 5.9 62 8-77 270-331 (517)
182 cd00312 Esterase_lipase Estera 54.4 13 0.00029 34.5 3.4 37 39-76 159-195 (493)
183 TIGR01849 PHB_depoly_PhaZ poly 53.6 20 0.00044 32.8 4.3 63 166-252 339-404 (406)
184 PLN02517 phosphatidylcholine-s 53.5 12 0.00027 35.8 2.9 39 38-76 193-232 (642)
185 TIGR01839 PHA_synth_II poly(R) 53.4 20 0.00044 34.2 4.3 27 165-191 441-467 (560)
186 PF10609 ParA: ParA/MinD ATPas 51.6 9.8 0.00021 26.4 1.5 12 8-19 2-13 (81)
187 PF00756 Esterase: Putative es 51.2 7.6 0.00017 32.4 1.1 35 42-77 100-135 (251)
188 PF07389 DUF1500: Protein of u 49.7 11 0.00025 26.2 1.6 34 39-80 8-41 (100)
189 COG3150 Predicted esterase [Ge 49.7 36 0.00078 27.3 4.5 39 32-77 41-79 (191)
190 COG4425 Predicted membrane pro 49.4 27 0.00058 32.4 4.3 37 33-69 373-409 (588)
191 COG3673 Uncharacterized conser 47.7 21 0.00046 31.6 3.2 67 7-78 66-143 (423)
192 PF11713 Peptidase_C80: Peptid 47.1 28 0.0006 27.4 3.6 65 16-81 62-133 (157)
193 PF01083 Cutinase: Cutinase; 46.7 26 0.00056 28.1 3.5 56 12-77 45-101 (179)
194 PF12715 Abhydrolase_7: Abhydr 46.1 26 0.00056 31.8 3.6 33 44-76 213-245 (390)
195 KOG3877 NADH:ubiquinone oxidor 46.0 29 0.00064 30.2 3.8 49 4-69 68-116 (393)
196 COG4782 Uncharacterized protei 45.1 49 0.0011 29.8 5.2 31 37-70 174-204 (377)
197 COG2819 Predicted hydrolase of 44.8 32 0.00069 29.5 3.9 31 38-69 114-149 (264)
198 PF07224 Chlorophyllase: Chlor 42.8 29 0.00063 29.9 3.3 45 35-79 94-142 (307)
199 PF09752 DUF2048: Uncharacteri 42.3 27 0.00059 31.2 3.2 32 42-76 163-194 (348)
200 PF05277 DUF726: Protein of un 41.7 58 0.0013 29.2 5.2 39 42-81 206-244 (345)
201 PF01674 Lipase_2: Lipase (cla 39.7 16 0.00035 30.4 1.4 36 42-81 60-95 (219)
202 PF12532 DUF3732: Protein of u 39.0 53 0.0011 26.8 4.2 45 6-50 100-151 (193)
203 PF07859 Abhydrolase_3: alpha/ 38.3 38 0.00083 27.1 3.4 43 166-235 167-209 (211)
204 PF12740 Chlorophyllase2: Chlo 37.7 52 0.0011 28.2 4.1 45 33-77 63-111 (259)
205 PF01555 N6_N4_Mtase: DNA meth 37.4 33 0.00072 27.7 2.9 40 8-50 2-41 (231)
206 PRK14566 triosephosphate isome 37.1 78 0.0017 27.2 5.1 47 33-82 187-233 (260)
207 PF04446 Thg1: tRNAHis guanyly 36.9 52 0.0011 25.2 3.6 50 9-65 23-73 (135)
208 PRK07868 acyl-CoA synthetase; 36.2 42 0.0009 34.6 3.9 21 56-76 140-160 (994)
209 PF08060 NOSIC: NOSIC (NUC001) 35.0 42 0.00091 21.0 2.4 21 35-55 14-35 (53)
210 KOG2112 Lysophospholipase [Lip 34.9 92 0.002 25.7 4.9 59 165-252 144-202 (206)
211 COG4099 Predicted peptidase [G 34.8 71 0.0015 28.2 4.4 28 165-192 315-342 (387)
212 COG4188 Predicted dienelactone 33.9 52 0.0011 29.7 3.6 24 53-76 155-178 (365)
213 PF05576 Peptidase_S37: PS-10 33.5 1.5E+02 0.0032 27.4 6.4 79 154-263 340-423 (448)
214 KOG2682 NAD-dependent histone 33.5 21 0.00045 30.2 1.0 58 16-81 43-114 (314)
215 COG3946 VirJ Type IV secretory 33.4 81 0.0018 29.0 4.7 48 30-80 302-349 (456)
216 PRK10949 protease 4; Provision 31.7 33 0.00072 33.3 2.2 50 38-96 132-183 (618)
217 COG3509 LpqC Poly(3-hydroxybut 30.7 1.4E+02 0.003 26.2 5.6 24 54-77 141-164 (312)
218 KOG3967 Uncharacterized conser 29.3 1.1E+02 0.0024 25.6 4.5 25 54-78 187-211 (297)
219 PF14020 DUF4236: Protein of u 29.1 35 0.00077 21.7 1.3 15 8-23 40-54 (55)
220 COG0218 Predicted GTPase [Gene 28.7 96 0.0021 25.5 4.1 36 9-54 72-107 (200)
221 PF03403 PAF-AH_p_II: Platelet 28.1 24 0.00052 32.0 0.6 30 223-252 304-333 (379)
222 PRK14567 triosephosphate isome 27.3 1.4E+02 0.0031 25.4 5.1 47 33-82 177-223 (253)
223 PF10929 DUF2811: Protein of u 26.9 71 0.0015 20.5 2.4 22 35-56 5-26 (57)
224 TIGR00190 thiC thiamine biosyn 26.7 59 0.0013 29.7 2.7 31 225-256 258-288 (423)
225 KOG2541 Palmitoyl protein thio 25.9 4.4E+02 0.0096 22.9 8.2 44 46-96 82-125 (296)
226 PF10605 3HBOH: 3HB-oligomer h 25.9 1.2E+02 0.0025 29.5 4.6 72 165-257 555-641 (690)
227 PF07849 DUF1641: Protein of u 25.7 28 0.0006 20.8 0.4 16 113-128 17-32 (42)
228 KOG1424 Predicted GTP-binding 25.6 55 0.0012 30.9 2.4 23 231-254 446-468 (562)
229 COG4814 Uncharacterized protei 25.3 1.4E+02 0.003 25.8 4.5 73 163-253 214-286 (288)
230 PF02273 Acyl_transf_2: Acyl t 25.1 2.6E+02 0.0057 24.0 6.1 186 5-250 56-252 (294)
231 TIGR02883 spore_cwlD N-acetylm 24.3 2.9E+02 0.0062 22.1 6.2 51 9-65 2-52 (189)
232 COG3545 Predicted esterase of 23.9 70 0.0015 25.7 2.4 58 165-252 117-177 (181)
233 PRK10162 acetyl esterase; Prov 23.7 2.8E+02 0.0061 24.2 6.5 41 39-80 137-177 (318)
234 TIGR02679 conserved hypothetic 22.7 1.5E+02 0.0033 27.0 4.7 32 155-192 288-319 (385)
235 COG4569 MhpF Acetaldehyde dehy 22.2 81 0.0018 26.1 2.5 26 213-239 257-282 (310)
236 COG4814 Uncharacterized protei 22.2 2.5E+02 0.0054 24.3 5.4 25 54-81 133-157 (288)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-73 Score=508.93 Aligned_cols=254 Identities=47% Similarity=0.885 Sum_probs=227.8
Q ss_pred CCcccccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHH
Q 024521 1 MSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (266)
Q Consensus 1 ~sW~~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~ 80 (266)
|||||.||||||||||||||||+++...+..+|+.+|+|++.||+.||++||||++++|||+||||||||||+||++|++
T Consensus 112 ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~ 191 (454)
T KOG1282|consen 112 YSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILK 191 (454)
T ss_pred ccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHh
Confidence 79999999999999999999999988878789999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCceeeechhhcc---------------------------------c----------------------------
Q 024521 81 HNAHSKGFKFNIKGVAAT---------------------------------K---------------------------- 99 (266)
Q Consensus 81 ~~~~~~~~~~nl~Gi~~~---------------------------------~---------------------------- 99 (266)
.|+....+.|||||+++. .
T Consensus 192 ~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~~~C~~~~~~~~~~ 271 (454)
T KOG1282|consen 192 GNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSNTKCNKAVEEFDSK 271 (454)
T ss_pred ccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCCchhHHHHHHHHHHHH
Confidence 997654578999999910 0
Q ss_pred ---------------c-----------ccCcCCCchhhhhhhcCcHHHHHHhCCCCCCCCCCCccccccccccCCCCCCC
Q 024521 100 ---------------M-----------SVGVDVCMTLERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSDTDSNIN 153 (266)
Q Consensus 100 ---------------~-----------~~~~~~c~~~~~~~yln~~~V~~aL~v~~~~~~~~~~~~~~~v~~~~~d~~~~ 153 (266)
. ...+++|.....+.|+|+++||+|||++....| +|..|+..+...+.+...+
T Consensus 272 ~~~~i~~y~i~~~~C~~~~~~~~~~~~~~~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~-~W~~Cn~~v~~~~~~~~~s 350 (454)
T KOG1282|consen 272 TTGDIDNYYILTPDCYPTSYELKKPTDCYGYDPCLSDYAEKYLNRPEVRKALHANKTSIG-KWERCNDEVNYNYNDDIKS 350 (454)
T ss_pred HhccCchhhhcchhhccccccccccccccccCCchhhhHHHhcCCHHHHHHhCCCCCCCC-cccccChhhhcccccCccc
Confidence 0 011244555555779999999999999876544 8999999998777788889
Q ss_pred hHHHHHHHHhCC-CcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccC-CeeeeEEEEeCCeeEEEEEcCC
Q 024521 154 ILPVLKRIIQNG-IPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHK-QQVGGWGTEYGNLLTFVTVRGA 231 (266)
Q Consensus 154 ~~~~l~~Ll~~~-i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~-~~~~G~~~~~~~~ltf~~V~~A 231 (266)
+++.+..++.++ +|||||+||.|++||+.|++.|+++ ++++..++|+||+.+ +|+|||+++|++ |+|++|+||
T Consensus 351 m~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~----L~~~~~~~~~pW~~~~~qvaG~~~~Y~~-ltf~tVrGa 425 (454)
T KOG1282|consen 351 MLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKS----LNLSITDEWRPWYHKGGQVAGYTKTYGG-LTFATVRGA 425 (454)
T ss_pred hHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHh----ccCccccCccCCccCCCceeeeEEEecC-EEEEEEeCC
Confidence 999999998755 9999999999999999999999999 678889999999995 899999999999 999999999
Q ss_pred cccCCccChHHHHHHHHHHhCCCCCCCCC
Q 024521 232 AHMVPYAQPSRALHLFSSFVHGRRLPNNT 260 (266)
Q Consensus 232 GH~vp~dqP~~~~~~i~~fl~~~~~~~~~ 260 (266)
|||||.|||++|+.|+++||.|+++++.+
T Consensus 426 GH~VP~~~p~~al~m~~~fl~g~~l~~~~ 454 (454)
T KOG1282|consen 426 GHMVPYDKPESALIMFQRFLNGQPLPSTP 454 (454)
T ss_pred cccCCCCCcHHHHHHHHHHHcCCCCCCCC
Confidence 99999999999999999999999998753
No 2
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=8.6e-64 Score=439.57 Aligned_cols=242 Identities=26% Similarity=0.547 Sum_probs=197.9
Q ss_pred ccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHhcccC
Q 024521 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS 85 (266)
Q Consensus 6 ~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~~~~~ 85 (266)
.||||||||||||||||+++...+ .+++++|+|++.||++||++||+|+++||||+||||||||||+||.+|+++|+..
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~-~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~ 79 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYIC 79 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCc-cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccc
Confidence 489999999999999998765444 3566677999999999999999999999999999999999999999999988754
Q ss_pred CCceeeechhhcc--------------------------------c-c-------------c-----------cC-----
Q 024521 86 KGFKFNIKGVAAT--------------------------------K-M-------------S-----------VG----- 103 (266)
Q Consensus 86 ~~~~~nl~Gi~~~--------------------------------~-~-------------~-----------~~----- 103 (266)
..++||||||++. + + + ..
T Consensus 80 ~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~ 159 (319)
T PLN02213 80 CEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIHH 159 (319)
T ss_pred cCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcCCHhh
Confidence 4568999999910 0 0 0 00
Q ss_pred -c-CCCch-------------hhhhhhcCcHHHHHHhCCCCCCCCCCCccccccccccCCCCCCChHHHHHHHHhCCCcE
Q 024521 104 -V-DVCMT-------------LERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSDTDSNINILPVLKRIIQNGIPV 168 (266)
Q Consensus 104 -~-~~c~~-------------~~~~~yln~~~V~~aL~v~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~l~~Ll~~~i~V 168 (266)
+ +.|.. ..+..|||+++||++||++... ..+|..|+..+.. ..|.+ +..+.+..++..++||
T Consensus 160 ~~~~~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~-~~~w~~c~~~v~~-~~d~~-~~~~~~~~~l~~~i~V 236 (319)
T PLN02213 160 ILTPDCDVTNVTSPDCYYYPYHLIECWANDESVREALHIEKGS-KGKWARCNRTIPY-NHDIV-SSIPYHMNNSISGYRS 236 (319)
T ss_pred cccCcccCccCCCCCcccchhHHHHHHhCCHHHHHHhCcCCCC-CCCCccCCccccc-ccccc-cchHHHHHHHhcCceE
Confidence 1 11321 2357799999999999997521 1479999987762 24544 3344444455568999
Q ss_pred EEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHHHHHHHH
Q 024521 169 WVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRALHLFS 248 (266)
Q Consensus 169 Liy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~~~~~i~ 248 (266)
|||+||.|.+||+.|++.|+++ ++|+...+|++|+.+++++||+|+|+|+|||++|++|||||| +||+++++|++
T Consensus 237 liY~Gd~D~icn~~g~~~wi~~----L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 237 LIYSGDHDIAVPFLATQAWIRS----LNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred EEEECCcCeeCCcHhHHHHHHh----cCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 9999999999999999999999 567777789999999999999999985599999999999998 69999999999
Q ss_pred HHhCCCCC
Q 024521 249 SFVHGRRL 256 (266)
Q Consensus 249 ~fl~~~~~ 256 (266)
+||.+++|
T Consensus 312 ~fi~~~~~ 319 (319)
T PLN02213 312 RWISGQPL 319 (319)
T ss_pred HHHcCCCC
Confidence 99999864
No 3
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=4.6e-63 Score=448.26 Aligned_cols=247 Identities=27% Similarity=0.530 Sum_probs=201.9
Q ss_pred CCcccccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHH
Q 024521 1 MSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (266)
Q Consensus 1 ~sW~~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~ 80 (266)
||||+.||||||||||||||||++..... .++++.|+++++||+.||+.||+|+++|+||+||||||||||.||.+|++
T Consensus 112 ~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~ 190 (437)
T PLN02209 112 YSWTKTANIIFLDQPVGSGFSYSKTPIER-TSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISK 190 (437)
T ss_pred CchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHh
Confidence 69999999999999999999998765444 35667789999999999999999999999999999999999999999999
Q ss_pred hcccCCCceeeechhhcc---------------------------------cc-------------c-------------
Q 024521 81 HNAHSKGFKFNIKGVAAT---------------------------------KM-------------S------------- 101 (266)
Q Consensus 81 ~~~~~~~~~~nl~Gi~~~---------------------------------~~-------------~------------- 101 (266)
++++....+|||+||+.. .+ +
T Consensus 191 ~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~~~~~~~~C~~~i~~~~~~~~~ 270 (437)
T PLN02209 191 GNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFSVDPSNKKCLKLVEEYHKCTDN 270 (437)
T ss_pred hcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccccCCCChHHHHHHHHHHHHHhhc
Confidence 886544568999999910 00 0
Q ss_pred -c----CcCC------------Cch---hhhhhhcCcHHHHHHhCCCCCCCCCCCccccccccccCCCCCCChHHHHHHH
Q 024521 102 -V----GVDV------------CMT---LERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSDTDSNINILPVLKRI 161 (266)
Q Consensus 102 -~----~~~~------------c~~---~~~~~yln~~~V~~aL~v~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~l~~L 161 (266)
. .... |.. .....|||+++||++||++.... ..|..|+..+.. ..|.+. ..+.+-.+
T Consensus 271 ~~~~~~~~~~c~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~-~~w~~~~~~~~~-~~d~~~-~~~~~~~~ 347 (437)
T PLN02209 271 INSHHTLIANCDDSNTQHISPDCYYYPYHLVECWANNESVREALHVDKGSI-GEWIRDHRGIPY-KSDIRS-SIPYHMNN 347 (437)
T ss_pred CCccccccccccccccccCCCCcccccHHHHHHHhCCHHHHHHhCCCCCCC-CCCccccchhhc-ccchhh-hHHHHHHH
Confidence 0 0111 321 13567999999999999974322 479999865432 244443 33444444
Q ss_pred HhCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChH
Q 024521 162 IQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPS 241 (266)
Q Consensus 162 l~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~ 241 (266)
|..++|||||+||.|.+||+.|++.|+++ ++|....+|++|+.+++++||+|+|+|+|||++|++|||||| +||+
T Consensus 348 l~~girVLiY~GD~D~icn~~Gte~wi~~----L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~ 422 (437)
T PLN02209 348 SINGYRSLIFSGDHDITMPFQATQAWIKS----LNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPE 422 (437)
T ss_pred HhcCceEEEEECCccccCCcHhHHHHHHh----cCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHH
Confidence 55699999999999999999999999999 677777889999999999999999985599999999999998 6999
Q ss_pred HHHHHHHHHhCCCCC
Q 024521 242 RALHLFSSFVHGRRL 256 (266)
Q Consensus 242 ~~~~~i~~fl~~~~~ 256 (266)
+|++|+++||.+++|
T Consensus 423 ~al~m~~~fi~~~~l 437 (437)
T PLN02209 423 ESSIMFQRWISGQPL 437 (437)
T ss_pred HHHHHHHHHHcCCCC
Confidence 999999999999875
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=2.6e-64 Score=458.73 Aligned_cols=247 Identities=40% Similarity=0.710 Sum_probs=200.1
Q ss_pred CCcccccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHH
Q 024521 1 MSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (266)
Q Consensus 1 ~sW~~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~ 80 (266)
||||+.||||||||||||||||++....+..+++++|+++++||+.||..||+++++|+||+||||||+|+|.+|.+|++
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~ 159 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQ 159 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhh
Confidence 79999999999999999999999887767778999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCceeeechhhcc---------------------------------cc--------------------c------
Q 024521 81 HNAHSKGFKFNIKGVAAT---------------------------------KM--------------------S------ 101 (266)
Q Consensus 81 ~~~~~~~~~~nl~Gi~~~---------------------------------~~--------------------~------ 101 (266)
++.....+.+|||||+.. .+ .
T Consensus 160 ~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~ 239 (415)
T PF00450_consen 160 QNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACPQCQKAITECAAALDELSCQYAIS 239 (415)
T ss_dssp HTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSHSSSCCHHHHHHHHHHHHHHCHHH
T ss_pred ccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccccccchhhHHHHHHHhhhhhcccc
Confidence 997654568999999910 00 0
Q ss_pred ---------cCcCCC-----------------chhhhhhhcCcHHHHHHhCCCCCCCCCCCccccccc-ccc-CCCCCCC
Q 024521 102 ---------VGVDVC-----------------MTLERFFYLNLPEVQKALHANRTNLPYGWSMCSGVL-NYS-DTDSNIN 153 (266)
Q Consensus 102 ---------~~~~~c-----------------~~~~~~~yln~~~V~~aL~v~~~~~~~~~~~~~~~v-~~~-~~d~~~~ 153 (266)
.....| .......|||+++||++||++... ..+|..|+..| ... ..|.+.+
T Consensus 240 ~~~~~~n~Ydi~~~~~~~~~~~~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~-~~~w~~~~~~V~~~~~~~d~~~~ 318 (415)
T PF00450_consen 240 QCNGGINPYDIRQPCYNPSRSSYDNSPSNDPPDDDYLEAYLNRPDVREALHVPVDS-NVNWQSCNDAVNFNWLYDDFMPS 318 (415)
T ss_dssp HHHTTSETTSTTSEETT-SHCTTCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STTT-SSS--SB-HHHHHHCCTCCC-SB
T ss_pred cccCCcceeeeeccccccccccccccccccccchhhHHHHhccHHHHHhhCCCccc-CCcccccCccccccccccccccc
Confidence 001122 224467899999999999997311 15899999977 333 3678899
Q ss_pred hHHHHHHHHhCCCcEEEEecCCccccCccchHHHHHHHHhccccccccccccccc--CCeeeeEEEEeCCeeEEEEEcCC
Q 024521 154 ILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFH--KQQVGGWGTEYGNLLTFVTVRGA 231 (266)
Q Consensus 154 ~~~~l~~Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~--~~~~~G~~~~~~~~ltf~~V~~A 231 (266)
+.+.++.||+.++|||||+|+.|++||+.|++.|+++ ++|....+|+.|.. +++++||+|+++| |||++|++|
T Consensus 319 ~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~----L~w~~~~~f~~~~~~~~~~~~G~~k~~~~-ltf~~V~~A 393 (415)
T PF00450_consen 319 SIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDN----LNWSGKDGFRQWPRKVNGQVAGYVKQYGN-LTFVTVRGA 393 (415)
T ss_dssp CHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHC----TECTEEEEEEEEEEETTCSEEEEEEEETT-EEEEEETT-
T ss_pred chhhhhhhhhccceeEEeccCCCEEEEeccchhhhhc----cccCcccccccccccccccccceeEEecc-EEEEEEcCC
Confidence 9999999999999999999999999999999999999 67777788888876 8999999999999 999999999
Q ss_pred cccCCccChHHHHHHHHHHhCC
Q 024521 232 AHMVPYAQPSRALHLFSSFVHG 253 (266)
Q Consensus 232 GH~vp~dqP~~~~~~i~~fl~~ 253 (266)
|||||.|||+++++||++||+|
T Consensus 394 GHmvP~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 394 GHMVPQDQPEAALQMFRRFLKG 415 (415)
T ss_dssp -SSHHHHSHHHHHHHHHHHHCT
T ss_pred cccChhhCHHHHHHHHHHHhcC
Confidence 9999999999999999999986
No 5
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=1.5e-62 Score=444.89 Aligned_cols=247 Identities=27% Similarity=0.565 Sum_probs=203.2
Q ss_pred CCcccccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHH
Q 024521 1 MSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (266)
Q Consensus 1 ~sW~~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~ 80 (266)
||||+.||||||||||||||||++..... .++.+.|+++++||+.||+.||+|+.+|+||+||||||+|||++|.+|++
T Consensus 110 ~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~ 188 (433)
T PLN03016 110 YSWTKMANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQ 188 (433)
T ss_pred CchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHh
Confidence 69999999999999999999998765444 35666779999999999999999999999999999999999999999999
Q ss_pred hcccCCCceeeechhhcc--------------------------------ccc-------------------------cC
Q 024521 81 HNAHSKGFKFNIKGVAAT--------------------------------KMS-------------------------VG 103 (266)
Q Consensus 81 ~~~~~~~~~~nl~Gi~~~--------------------------------~~~-------------------------~~ 103 (266)
+|+.....+|||||++.. +.+ ..
T Consensus 189 ~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~~C~~~~~~~~~~~~~ 268 (433)
T PLN03016 189 GNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAK 268 (433)
T ss_pred hcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchHHHHHHHHHHHHHhcC
Confidence 887544568999999910 000 00
Q ss_pred ------c-CCCch-------------hhhhhhcCcHHHHHHhCCCCCCCCCCCccccccccccCCCCCCChHHHHHHHHh
Q 024521 104 ------V-DVCMT-------------LERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSDTDSNINILPVLKRIIQ 163 (266)
Q Consensus 104 ------~-~~c~~-------------~~~~~yln~~~V~~aL~v~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~l~~Ll~ 163 (266)
+ +.|.. .....|+|+++||++||++.... .+|..|+..+.. ..|.+ +..+.+..++.
T Consensus 269 ~n~yni~~~~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~-~~w~~cn~~v~~-~~d~~-~~~~~~~~~l~ 345 (433)
T PLN03016 269 INIHHILTPDCDVTNVTSPDCYYYPYHLIECWANDESVREALHIEKGSK-GKWARCNRTIPY-NHDIV-SSIPYHMNNSI 345 (433)
T ss_pred CChhhccCCcccccccCCCcccccchHHHHHHhCCHHHHHHhCCCCCCC-CCCccCCccccc-ccccc-hhhHHHHHHHh
Confidence 0 11211 13467999999999999975311 479999987752 24444 33444445555
Q ss_pred CCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHHH
Q 024521 164 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 243 (266)
Q Consensus 164 ~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~~ 243 (266)
.++|||||+||.|.+||+.|++.|+++ ++|+...+|++|+.+++++||+|+|+|+|||++|++|||||| +||++|
T Consensus 346 ~~irVLiY~Gd~D~icn~~Gt~~wi~~----L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~a 420 (433)
T PLN03016 346 SGYRSLIYSGDHDIAVPFLATQAWIRS----LNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNET 420 (433)
T ss_pred cCceEEEEECCccccCCcHhHHHHHHh----CCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHH
Confidence 689999999999999999999999999 677777889999999999999999975599999999999998 799999
Q ss_pred HHHHHHHhCCCCC
Q 024521 244 LHLFSSFVHGRRL 256 (266)
Q Consensus 244 ~~~i~~fl~~~~~ 256 (266)
++|+++||.+++|
T Consensus 421 l~m~~~Fi~~~~l 433 (433)
T PLN03016 421 FIMFQRWISGQPL 433 (433)
T ss_pred HHHHHHHHcCCCC
Confidence 9999999999865
No 6
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=6.9e-60 Score=432.18 Aligned_cols=251 Identities=27% Similarity=0.506 Sum_probs=216.2
Q ss_pred CCcccccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHH
Q 024521 1 MSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (266)
Q Consensus 1 ~sW~~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~ 80 (266)
||||+.+||||||||+||||||++.. .+..++.++|+|+++||+.||++||+++.+|+||+||||||+|+|.+|.+|++
T Consensus 116 ~sW~~~~~~l~iDqP~G~G~S~~~~~-~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~ 194 (462)
T PTZ00472 116 YSWNNEAYVIYVDQPAGVGFSYADKA-DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINM 194 (462)
T ss_pred cccccccCeEEEeCCCCcCcccCCCC-CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHh
Confidence 69999999999999999999998654 45567899999999999999999999999999999999999999999999999
Q ss_pred hcccCCCceeeechhhcc------------------------------------ccc-----------c-------C---
Q 024521 81 HNAHSKGFKFNIKGVAAT------------------------------------KMS-----------V-------G--- 103 (266)
Q Consensus 81 ~~~~~~~~~~nl~Gi~~~------------------------------------~~~-----------~-------~--- 103 (266)
+|+.+...+||||||++. ++. . .
T Consensus 195 ~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~~~~ 274 (462)
T PTZ00472 195 GNKKGDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDADSS 274 (462)
T ss_pred hccccCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCcchH
Confidence 987655578999999810 000 0 0
Q ss_pred ----------------------c--------CCCch-hhhhhhcCcHHHHHHhCCCCCCCCCCCccccccccccC-CCCC
Q 024521 104 ----------------------V--------DVCMT-LERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSD-TDSN 151 (266)
Q Consensus 104 ----------------------~--------~~c~~-~~~~~yln~~~V~~aL~v~~~~~~~~~~~~~~~v~~~~-~d~~ 151 (266)
+ +.|.. ..+..|||+++||++||++. .+|..|+..|...+ .|.+
T Consensus 275 c~~a~~~c~~~~~~~~~~g~n~Ydi~~~c~~~~c~~~~~~~~yLN~~~Vq~AL~v~~----~~w~~c~~~V~~~~~~D~~ 350 (462)
T PTZ00472 275 CSVARALCNEYIAVYSATGLNNYDIRKPCIGPLCYNMDNTIAFMNREDVQSSLGVKP----ATWQSCNMEVNLMFEMDWM 350 (462)
T ss_pred HHHHHHHHHHHHHHHHhcCCChhheeccCCCCCccCHHHHHHHhCCHHHHHHhCCCC----CCceeCCHHHHHHhhhccc
Confidence 0 01211 23567999999999999973 48999999887665 6888
Q ss_pred CChHHHHHHHHhCCCcEEEEecCCccccCccchHHHHHHHHhc-ccccccccccccc-cCCeeeeEEEEeC-----CeeE
Q 024521 152 INILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARD-LNFEVTVPYGAWF-HKQQVGGWGTEYG-----NLLT 224 (266)
Q Consensus 152 ~~~~~~l~~Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~-~~~~~~~~~~~w~-~~~~~~G~~~~~~-----~~lt 224 (266)
.++.+.++.||+.++|||||+||.|++||+.|+++|+++|+|. ...+..++|++|+ .+++++||+|+++ | |+
T Consensus 351 ~~~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~-l~ 429 (462)
T PTZ00472 351 KNFNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSG-FS 429 (462)
T ss_pred cchHHHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCC-eE
Confidence 8999999999999999999999999999999999999998874 3334578899994 6889999999999 8 99
Q ss_pred EEEEcCCcccCCccChHHHHHHHHHHhCCCCCC
Q 024521 225 FVTVRGAAHMVPYAQPSRALHLFSSFVHGRRLP 257 (266)
Q Consensus 225 f~~V~~AGH~vp~dqP~~~~~~i~~fl~~~~~~ 257 (266)
|++|++||||||.|||+++++|+++|+.|++++
T Consensus 430 ~~~V~~AGH~vp~d~P~~~~~~i~~fl~~~~~~ 462 (462)
T PTZ00472 430 FVQVYNAGHMVPMDQPAVALTMINRFLRNRPLS 462 (462)
T ss_pred EEEECCCCccChhhHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999998764
No 7
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.3e-47 Score=318.21 Aligned_cols=246 Identities=27% Similarity=0.430 Sum_probs=204.7
Q ss_pred CCcccccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHH
Q 024521 1 MSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (266)
Q Consensus 1 ~sW~~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~ 80 (266)
++|-+.|+|||||.|||+||||.+..+.|+.+++++|.|+.+.|+.||..||+|+..||||+-|||||+.++.+|..+.+
T Consensus 66 ~TWlk~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~ 145 (414)
T KOG1283|consen 66 WTWLKDADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDD 145 (414)
T ss_pred chhhhhccEEEecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHH
Confidence 57999999999999999999999999889999999999999999999999999999999999999999999999999988
Q ss_pred hcccCCCceeeechhhc-------c-----------c-----------------------------------------c-
Q 024521 81 HNAHSKGFKFNIKGVAA-------T-----------K-----------------------------------------M- 100 (266)
Q Consensus 81 ~~~~~~~~~~nl~Gi~~-------~-----------~-----------------------------------------~- 100 (266)
..+.+ ..+.|+.|++. . + +
T Consensus 146 aIk~G-~i~~nf~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~ 224 (414)
T KOG1283|consen 146 AIKRG-EIKLNFIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLIS 224 (414)
T ss_pred HHhcC-ceeecceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCccee
Confidence 87765 56789999880 0 0 0
Q ss_pred --ccCcC-----------C------------------Cc-------hhhhhhhcCcHHHHHHhCCCCCCCCCCCcccccc
Q 024521 101 --SVGVD-----------V------------------CM-------TLERFFYLNLPEVQKALHANRTNLPYGWSMCSGV 142 (266)
Q Consensus 101 --~~~~~-----------~------------------c~-------~~~~~~yln~~~V~~aL~v~~~~~~~~~~~~~~~ 142 (266)
+...+ + |. .+.+..++|-+ ||+.|++.+.+ ..|...+..
T Consensus 225 ~~sn~VdfYNil~~t~~d~~~~ss~~~~~~~~~~rrl~~~~~~~~~~D~L~~lM~g~-vrkkLgIip~~--~~wGgqsg~ 301 (414)
T KOG1283|consen 225 RESNGVDFYNILTKTLGDQYSLSSRAAMTPEEVMRRLLVRFVGDEDRDKLSDLMNGP-VRKKLGIIPGG--VKWGGQSGD 301 (414)
T ss_pred ecccCcceeeeeccCCCcchhhhhhhhcchHHHHHHHHhccCcchhHHHHHHHhccc-ccccccccCCC--CcccCcCCc
Confidence 00000 0 00 01234455544 78889887664 589999887
Q ss_pred ccccC-CCCCCChHHHHHHHHhCCCcEEEEecCCccccCccchHHHHHHHHhcccc-cccccccccccCCeeeeEEEEeC
Q 024521 143 LNYSD-TDSNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNF-EVTVPYGAWFHKQQVGGWGTEYG 220 (266)
Q Consensus 143 v~~~~-~d~~~~~~~~l~~Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~-~~~~~~~~w~~~~~~~G~~~~~~ 220 (266)
++..+ .|+|+|+...+..||+++++|.||+|++|.||++.|+++|++.|.|.-.- +...+|...+.+-..+||.|+|+
T Consensus 302 vFt~lq~dFMKPvi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktyk 381 (414)
T KOG1283|consen 302 VFTKLQGDFMKPVISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYK 381 (414)
T ss_pred hHHHhhhhhcccHHHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhc
Confidence 77655 89999999999999999999999999999999999999999998774322 23345555556778999999999
Q ss_pred CeeEEEEEcCCcccCCccChHHHHHHHHHHh
Q 024521 221 NLLTFVTVRGAAHMVPYAQPSRALHLFSSFV 251 (266)
Q Consensus 221 ~~ltf~~V~~AGH~vp~dqP~~~~~~i~~fl 251 (266)
| |.|.+|..||||||.|+|+.|.+|++-+.
T Consensus 382 n-l~f~wilraghmvp~Dnp~~a~hmlr~vt 411 (414)
T KOG1283|consen 382 N-LSFFWILRAGHMVPADNPAAASHMLRHVT 411 (414)
T ss_pred c-ceeEEeecccCcccCCCHHHHhhheeecc
Confidence 9 99999999999999999999999998665
No 8
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-40 Score=296.51 Aligned_cols=248 Identities=25% Similarity=0.384 Sum_probs=188.9
Q ss_pred CCcccccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCC--CeEEEeeCCCCccHHHHHHHH
Q 024521 1 MSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSR--ELFLTGESYAGHYIPQLADVL 78 (266)
Q Consensus 1 ~sW~~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~--~~~i~GeSYgG~yvp~la~~i 78 (266)
+||+.++||||||||||||||++. ......+...+.+|++.|++-||+.||++.+. |+||+||||||+|+|.||.+|
T Consensus 141 ~SW~~~adLvFiDqPvGTGfS~a~-~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L 219 (498)
T COG2939 141 GSWLDFADLVFIDQPVGTGFSRAL-GDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHEL 219 (498)
T ss_pred cccccCCceEEEecCcccCccccc-ccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHH
Confidence 599999999999999999999972 22334566788899999999999999999887 999999999999999999999
Q ss_pred HHhcccCCCceeeechhhcc-------------------------------c----------------cccC--------
Q 024521 79 LDHNAHSKGFKFNIKGVAAT-------------------------------K----------------MSVG-------- 103 (266)
Q Consensus 79 ~~~~~~~~~~~~nl~Gi~~~-------------------------------~----------------~~~~-------- 103 (266)
++++... +..+||+++++. . +...
T Consensus 220 ~~~~~~~-~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~ 298 (498)
T COG2939 220 LEDNIAL-NGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQP 298 (498)
T ss_pred HHhcccc-CCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhH
Confidence 9986322 336788888710 0 0000
Q ss_pred --------------------------c---CCC---------ch--hhhhhhcCcHHHHHHhCCCCCCCCCCCccccccc
Q 024521 104 --------------------------V---DVC---------MT--LERFFYLNLPEVQKALHANRTNLPYGWSMCSGVL 143 (266)
Q Consensus 104 --------------------------~---~~c---------~~--~~~~~yln~~~V~~aL~v~~~~~~~~~~~~~~~v 143 (266)
+ ..| .+ .....|++-..+++.++... ..|..|+..+
T Consensus 299 c~~~~~~~~~~~~~~~~r~~~~~~n~y~~r~~~~d~g~~~~~y~~~~~~ld~~~~~~~~~~~~~~~----d~~~~c~t~a 374 (498)
T COG2939 299 CENASAYLTGLMREYVGRAGGRLLNVYDIREECRDPGLGGSCYDTLSTSLDYFNFDPEQEVNDPEV----DNISGCTTDA 374 (498)
T ss_pred HHHHHHHHHhcchhhhccccccccccccchhhcCCCCcccccccceeeccccccccchhccccccc----cchhccchHH
Confidence 0 011 11 11244566556666654432 3799999765
Q ss_pred cccC----CCCCCChHHHHHHHHhCCCcEEEEecCCccccCccchHHHHHHHHhc--ccccccccccccc-cCCeeeeEE
Q 024521 144 NYSD----TDSNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARD--LNFEVTVPYGAWF-HKQQVGGWG 216 (266)
Q Consensus 144 ~~~~----~d~~~~~~~~l~~Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~--~~~~~~~~~~~w~-~~~~~~G~~ 216 (266)
...+ .+++.+....+..++.+++++++|.|+.|.+|++.+++.|..+|+|. .++...+.+--|. ...+..|-.
T Consensus 375 ~~~f~~~~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~ 454 (498)
T COG2939 375 MTDFLTFTGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGYFDASTPFFWSRLTLEEMGGY 454 (498)
T ss_pred HHhhhhhcCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecchhhhcCCCcccccchhhcccc
Confidence 5433 67788888889999999999999999999999999999999998863 3444333322222 255666666
Q ss_pred EEeCCeeEEEEEcCCcccCCccChHHHHHHHHHHhCCCC
Q 024521 217 TEYGNLLTFVTVRGAAHMVPYAQPSRALHLFSSFVHGRR 255 (266)
Q Consensus 217 ~~~~~~ltf~~V~~AGH~vp~dqP~~~~~~i~~fl~~~~ 255 (266)
++++| ++|+.+++||||||+|+|+.+..|++.|+.+..
T Consensus 455 ~s~~n-~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~~~ 492 (498)
T COG2939 455 KSYRN-LTFLRIYEAGHMVPYDRPESSLEMVNLWINGYG 492 (498)
T ss_pred cccCC-ceEEEEecCcceeecCChHHHHHHHHHHHhhcc
Confidence 67778 999999999999999999999999999998743
No 9
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.39 E-value=1.3e-12 Score=113.67 Aligned_cols=61 Identities=23% Similarity=0.284 Sum_probs=50.0
Q ss_pred CCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHHH
Q 024521 164 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 243 (266)
Q Consensus 164 ~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~~ 243 (266)
..+|||+++|..|.++|....+. +.++ . .+ .+++++.+|||+++.++|+++
T Consensus 233 i~~P~lvi~G~~D~~~~~~~~~~-~~~~---~------------------------~~-~~~~~i~~~gH~~~~e~p~~~ 283 (294)
T PLN02824 233 VKCPVLIAWGEKDPWEPVELGRA-YANF---D------------------------AV-EDFIVLPGVGHCPQDEAPELV 283 (294)
T ss_pred cCCCeEEEEecCCCCCChHHHHH-HHhc---C------------------------Cc-cceEEeCCCCCChhhhCHHHH
Confidence 37899999999999999876655 3331 0 22 667899999999999999999
Q ss_pred HHHHHHHhCC
Q 024521 244 LHLFSSFVHG 253 (266)
Q Consensus 244 ~~~i~~fl~~ 253 (266)
.+.+.+|+.+
T Consensus 284 ~~~i~~fl~~ 293 (294)
T PLN02824 284 NPLIESFVAR 293 (294)
T ss_pred HHHHHHHHhc
Confidence 9999999964
No 10
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.37 E-value=4.2e-12 Score=106.76 Aligned_cols=60 Identities=20% Similarity=0.238 Sum_probs=51.5
Q ss_pred CCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHHH
Q 024521 164 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 243 (266)
Q Consensus 164 ~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~~ 243 (266)
..+|||+.+|+.|.+||....+.+.+.+ .+ .++..+.++||+.+.++|+..
T Consensus 197 i~~P~l~i~g~~D~~~~~~~~~~~~~~~----------------------------~~-~~~~~~~~~gH~~~~~~~~~~ 247 (257)
T TIGR03611 197 IQHPVLLIANRDDMLVPYTQSLRLAAAL----------------------------PN-AQLKLLPYGGHASNVTDPETF 247 (257)
T ss_pred cCccEEEEecCcCcccCHHHHHHHHHhc----------------------------CC-ceEEEECCCCCCccccCHHHH
Confidence 4789999999999999988777666652 23 667889999999999999999
Q ss_pred HHHHHHHhC
Q 024521 244 LHLFSSFVH 252 (266)
Q Consensus 244 ~~~i~~fl~ 252 (266)
.+.+.+||.
T Consensus 248 ~~~i~~fl~ 256 (257)
T TIGR03611 248 NRALLDFLK 256 (257)
T ss_pred HHHHHHHhc
Confidence 999999985
No 11
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.34 E-value=6e-12 Score=106.68 Aligned_cols=185 Identities=17% Similarity=0.178 Sum_probs=107.6
Q ss_pred cccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHhccc
Q 024521 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH 84 (266)
Q Consensus 5 ~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~~~~ 84 (266)
+..+++.+|+| |.|.|.... . .+..+.++|+.+++.. +...+++|+|+|+||..+..+|....+.
T Consensus 41 ~~~~vi~~D~~-G~G~s~~~~--~--~~~~~~~~d~~~~l~~-------l~~~~~~lvGhS~Gg~va~~~a~~~~~~--- 105 (255)
T PRK10673 41 NDHDIIQVDMR-NHGLSPRDP--V--MNYPAMAQDLLDTLDA-------LQIEKATFIGHSMGGKAVMALTALAPDR--- 105 (255)
T ss_pred hCCeEEEECCC-CCCCCCCCC--C--CCHHHHHHHHHHHHHH-------cCCCceEEEEECHHHHHHHHHHHhCHhh---
Confidence 56799999999 999886432 2 3567778888888875 3446799999999999888887653332
Q ss_pred CCCceeeechhhccccc-cCc-----------------CCCch-----hhhhhhcCcHHHHHHhCCCCCCCCCCCccccc
Q 024521 85 SKGFKFNIKGVAATKMS-VGV-----------------DVCMT-----LERFFYLNLPEVQKALHANRTNLPYGWSMCSG 141 (266)
Q Consensus 85 ~~~~~~nl~Gi~~~~~~-~~~-----------------~~c~~-----~~~~~yln~~~V~~aL~v~~~~~~~~~~~~~~ 141 (266)
+++++.-... ..+ ..+.. ......+....+.+.+.-... ...|.....
T Consensus 106 -------v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 176 (255)
T PRK10673 106 -------IDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVIQFLLKSFV--DGEWRFNVP 176 (255)
T ss_pred -------cceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHHHHHHhcCC--cceeEeeHH
Confidence 2332200000 000 00000 000111122222222210000 000100000
Q ss_pred cccccCCCCCCChHHHHHH------HHhCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeE
Q 024521 142 VLNYSDTDSNINILPVLKR------IIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGW 215 (266)
Q Consensus 142 ~v~~~~~d~~~~~~~~l~~------Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~ 215 (266)
. ....... +.....|||+..|+.|..++....+.+.+.
T Consensus 177 ~-----------~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~------------------------- 220 (255)
T PRK10673 177 V-----------LWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQ------------------------- 220 (255)
T ss_pred H-----------HHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHh-------------------------
Confidence 0 0001111 112357999999999998886655555444
Q ss_pred EEEeCCeeEEEEEcCCcccCCccChHHHHHHHHHHhCC
Q 024521 216 GTEYGNLLTFVTVRGAAHMVPYAQPSRALHLFSSFVHG 253 (266)
Q Consensus 216 ~~~~~~~ltf~~V~~AGH~vp~dqP~~~~~~i~~fl~~ 253 (266)
..+ .++.++.++||+.+.++|+...+.+.+||..
T Consensus 221 ---~~~-~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 221 ---FPQ-ARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred ---CCC-cEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 234 7889999999999999999999999999965
No 12
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.34 E-value=8.2e-12 Score=107.66 Aligned_cols=61 Identities=20% Similarity=0.400 Sum_probs=50.3
Q ss_pred hCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHH
Q 024521 163 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 242 (266)
Q Consensus 163 ~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~ 242 (266)
+-.+|||+++|+.|.++|....+...+.+ .+ .+++++. +|||.+.|+|++
T Consensus 205 ~i~~P~lii~G~~D~~v~~~~~~~l~~~~----------------------------~~-~~~~~i~-~gH~~~~e~p~~ 254 (276)
T TIGR02240 205 KIQQPTLVLAGDDDPIIPLINMRLLAWRI----------------------------PN-AELHIID-DGHLFLITRAEA 254 (276)
T ss_pred cCCCCEEEEEeCCCCcCCHHHHHHHHHhC----------------------------CC-CEEEEEc-CCCchhhccHHH
Confidence 33789999999999999988776665552 23 6667775 599999999999
Q ss_pred HHHHHHHHhCC
Q 024521 243 ALHLFSSFVHG 253 (266)
Q Consensus 243 ~~~~i~~fl~~ 253 (266)
..+.+.+|+.+
T Consensus 255 ~~~~i~~fl~~ 265 (276)
T TIGR02240 255 VAPIIMKFLAE 265 (276)
T ss_pred HHHHHHHHHHH
Confidence 99999999975
No 13
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.33 E-value=2.9e-11 Score=103.41 Aligned_cols=60 Identities=23% Similarity=0.335 Sum_probs=50.7
Q ss_pred CCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHHH
Q 024521 164 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 243 (266)
Q Consensus 164 ~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~~ 243 (266)
..+|+|+++|+.|.++|....+.+.+.+ .+ ..+..+.++||+++.++|++.
T Consensus 219 i~~P~lii~g~~D~~vp~~~~~~~~~~~----------------------------~~-~~~~~~~~~gH~~~~e~p~~~ 269 (278)
T TIGR03056 219 ITIPLHLIAGEEDKAVPPDESKRAATRV----------------------------PT-ATLHVVPGGGHLVHEEQADGV 269 (278)
T ss_pred CCCCEEEEEeCCCcccCHHHHHHHHHhc----------------------------cC-CeEEEECCCCCcccccCHHHH
Confidence 3689999999999999987766665552 23 666889999999999999999
Q ss_pred HHHHHHHhC
Q 024521 244 LHLFSSFVH 252 (266)
Q Consensus 244 ~~~i~~fl~ 252 (266)
.++|.+|+.
T Consensus 270 ~~~i~~f~~ 278 (278)
T TIGR03056 270 VGLILQAAE 278 (278)
T ss_pred HHHHHHHhC
Confidence 999999984
No 14
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.32 E-value=1.2e-11 Score=107.37 Aligned_cols=58 Identities=16% Similarity=0.155 Sum_probs=47.8
Q ss_pred CCcEEEEecCCccccCccchHH-HHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHHH
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRT-LIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 243 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~-~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~~ 243 (266)
.+|||++.|+.|.+++...... +.+. ..+ .++.+|.+|||+++.|+|+++
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~----------------------------ip~-~~~~~i~~aGH~~~~e~Pe~~ 277 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRAT----------------------------FPD-HVLVELPNAKHFIQEDAPDRI 277 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHh----------------------------cCC-CeEEEcCCCcccccccCHHHH
Confidence 6999999999999887654333 3333 134 788999999999999999999
Q ss_pred HHHHHHHh
Q 024521 244 LHLFSSFV 251 (266)
Q Consensus 244 ~~~i~~fl 251 (266)
.++|.+|+
T Consensus 278 ~~~i~~~~ 285 (286)
T PRK03204 278 AAAIIERF 285 (286)
T ss_pred HHHHHHhc
Confidence 99999997
No 15
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.32 E-value=2.8e-11 Score=104.15 Aligned_cols=61 Identities=16% Similarity=0.217 Sum_probs=52.3
Q ss_pred hCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHH
Q 024521 163 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 242 (266)
Q Consensus 163 ~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~ 242 (266)
+..+|||++.|+.|.+++...++.+.+.+ .+ .++.+|.+|||+++.|+|+.
T Consensus 221 ~i~~Pvlli~G~~D~~v~~~~~~~~~~~~----------------------------~~-~~~~~i~~agH~~~~e~p~~ 271 (282)
T TIGR03343 221 EIKAKTLVTWGRDDRFVPLDHGLKLLWNM----------------------------PD-AQLHVFSRCGHWAQWEHADA 271 (282)
T ss_pred hCCCCEEEEEccCCCcCCchhHHHHHHhC----------------------------CC-CEEEEeCCCCcCCcccCHHH
Confidence 44789999999999999987666665552 34 77799999999999999999
Q ss_pred HHHHHHHHhC
Q 024521 243 ALHLFSSFVH 252 (266)
Q Consensus 243 ~~~~i~~fl~ 252 (266)
+.++|.+||.
T Consensus 272 ~~~~i~~fl~ 281 (282)
T TIGR03343 272 FNRLVIDFLR 281 (282)
T ss_pred HHHHHHHHhh
Confidence 9999999985
No 16
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.32 E-value=2.9e-11 Score=105.64 Aligned_cols=68 Identities=13% Similarity=0.148 Sum_probs=51.3
Q ss_pred HHHhCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccC
Q 024521 160 RIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQ 239 (266)
Q Consensus 160 ~Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dq 239 (266)
.+.+..+|||+++|+.|.+|+... +.+.+.+.. ..+ .++..+.++||+++.++
T Consensus 234 ~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~-------------------------~~~-~~~~~i~~~gH~~~~e~ 286 (302)
T PRK00870 234 VLERWDKPFLTAFSDSDPITGGGD-AILQKRIPG-------------------------AAG-QPHPTIKGAGHFLQEDS 286 (302)
T ss_pred hhhcCCCceEEEecCCCCcccCch-HHHHhhccc-------------------------ccc-cceeeecCCCccchhhC
Confidence 344558999999999999999754 444333210 011 44688999999999999
Q ss_pred hHHHHHHHHHHhCCC
Q 024521 240 PSRALHLFSSFVHGR 254 (266)
Q Consensus 240 P~~~~~~i~~fl~~~ 254 (266)
|+.+.+.+.+|+.+.
T Consensus 287 p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 287 GEELAEAVLEFIRAT 301 (302)
T ss_pred hHHHHHHHHHHHhcC
Confidence 999999999999654
No 17
>PLN02965 Probable pheophorbidase
Probab=99.31 E-value=1.8e-11 Score=104.32 Aligned_cols=60 Identities=8% Similarity=0.176 Sum_probs=50.6
Q ss_pred CCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHHH
Q 024521 164 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 243 (266)
Q Consensus 164 ~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~~ 243 (266)
..+|+|+..|..|.++|....+.+.+.+ .+ .+++++.+|||+++.++|+++
T Consensus 192 i~vP~lvi~g~~D~~~~~~~~~~~~~~~----------------------------~~-a~~~~i~~~GH~~~~e~p~~v 242 (255)
T PLN02965 192 EKVPRVYIKTAKDNLFDPVRQDVMVENW----------------------------PP-AQTYVLEDSDHSAFFSVPTTL 242 (255)
T ss_pred CCCCEEEEEcCCCCCCCHHHHHHHHHhC----------------------------Cc-ceEEEecCCCCchhhcCHHHH
Confidence 4799999999999999986665555552 33 667889999999999999999
Q ss_pred HHHHHHHhC
Q 024521 244 LHLFSSFVH 252 (266)
Q Consensus 244 ~~~i~~fl~ 252 (266)
.++|.+|++
T Consensus 243 ~~~l~~~~~ 251 (255)
T PLN02965 243 FQYLLQAVS 251 (255)
T ss_pred HHHHHHHHH
Confidence 999999985
No 18
>PHA02857 monoglyceride lipase; Provisional
Probab=99.29 E-value=3.1e-11 Score=103.90 Aligned_cols=63 Identities=11% Similarity=0.272 Sum_probs=51.4
Q ss_pred hCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChH-
Q 024521 163 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPS- 241 (266)
Q Consensus 163 ~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~- 241 (266)
+..+|||+++|+.|.+||...++.+.+.+. .+ .++.++.+|||+++.|+|+
T Consensus 207 ~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~---------------------------~~-~~~~~~~~~gH~~~~e~~~~ 258 (276)
T PHA02857 207 KIKTPILILQGTNNEISDVSGAYYFMQHAN---------------------------CN-REIKIYEGAKHHLHKETDEV 258 (276)
T ss_pred cCCCCEEEEecCCCCcCChHHHHHHHHHcc---------------------------CC-ceEEEeCCCcccccCCchhH
Confidence 447899999999999999999988887731 12 5678999999999999984
Q ss_pred --HHHHHHHHHhCC
Q 024521 242 --RALHLFSSFVHG 253 (266)
Q Consensus 242 --~~~~~i~~fl~~ 253 (266)
++++-+.+||.+
T Consensus 259 ~~~~~~~~~~~l~~ 272 (276)
T PHA02857 259 KKSVMKEIETWIFN 272 (276)
T ss_pred HHHHHHHHHHHHHH
Confidence 566777778865
No 19
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.28 E-value=5.6e-11 Score=106.64 Aligned_cols=65 Identities=23% Similarity=0.381 Sum_probs=51.9
Q ss_pred CCCcEEEEecCCccccCccchH-HHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHH
Q 024521 164 NGIPVWVFSGDQDSVVPLLGSR-TLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 242 (266)
Q Consensus 164 ~~i~VLiy~G~~D~iv~~~g~~-~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~ 242 (266)
..+||||+.|+.|.++|..+.. .+++.+... ..+ .++.+|.+|||+++.|+|++
T Consensus 291 i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~------------------------ip~-~~l~~i~~aGH~~~~E~Pe~ 345 (360)
T PLN02679 291 ISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQ------------------------LPN-VTLYVLEGVGHCPHDDRPDL 345 (360)
T ss_pred cCCCEEEEEeCCCCCcCchhhHHHHHHhhhcc------------------------CCc-eEEEEcCCCCCCccccCHHH
Confidence 3799999999999999987532 344443211 134 77899999999999999999
Q ss_pred HHHHHHHHhCC
Q 024521 243 ALHLFSSFVHG 253 (266)
Q Consensus 243 ~~~~i~~fl~~ 253 (266)
+.+.|.+||..
T Consensus 346 ~~~~I~~FL~~ 356 (360)
T PLN02679 346 VHEKLLPWLAQ 356 (360)
T ss_pred HHHHHHHHHHh
Confidence 99999999964
No 20
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.25 E-value=1.7e-11 Score=104.32 Aligned_cols=63 Identities=19% Similarity=0.202 Sum_probs=51.1
Q ss_pred HHhCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccCh
Q 024521 161 IIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP 240 (266)
Q Consensus 161 Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP 240 (266)
|.+..+||||++|+.|.++|....+...+. ..+ ..++++.++||+++.|+|
T Consensus 192 l~~i~~P~lii~G~~D~~~~~~~~~~~~~~----------------------------i~~-~~~~~i~~~gH~~~~e~p 242 (256)
T PRK10349 192 LQNVSMPFLRLYGYLDGLVPRKVVPMLDKL----------------------------WPH-SESYIFAKAAHAPFISHP 242 (256)
T ss_pred HhhcCCCeEEEecCCCccCCHHHHHHHHHh----------------------------CCC-CeEEEeCCCCCCccccCH
Confidence 334479999999999999987665544444 134 778999999999999999
Q ss_pred HHHHHHHHHHhC
Q 024521 241 SRALHLFSSFVH 252 (266)
Q Consensus 241 ~~~~~~i~~fl~ 252 (266)
+...+.+.+|-.
T Consensus 243 ~~f~~~l~~~~~ 254 (256)
T PRK10349 243 AEFCHLLVALKQ 254 (256)
T ss_pred HHHHHHHHHHhc
Confidence 999999999854
No 21
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.24 E-value=1.8e-10 Score=98.27 Aligned_cols=64 Identities=16% Similarity=0.214 Sum_probs=45.1
Q ss_pred ccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHH
Q 024521 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADV 77 (266)
Q Consensus 6 ~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~ 77 (266)
..+++.+|.| |+|.|..........+.+..++++..++.. +...+++|+|+||||..+..+|..
T Consensus 53 g~~vi~~d~~-G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~liG~S~Gg~ia~~~a~~ 116 (288)
T TIGR01250 53 GREVIMYDQL-GCGYSDQPDDSDELWTIDYFVDELEEVREK-------LGLDKFYLLGHSWGGMLAQEYALK 116 (288)
T ss_pred CCEEEEEcCC-CCCCCCCCCcccccccHHHHHHHHHHHHHH-------cCCCcEEEEEeehHHHHHHHHHHh
Confidence 4899999999 999987532221013456666666555543 344579999999999888887764
No 22
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.24 E-value=4.2e-11 Score=104.16 Aligned_cols=65 Identities=12% Similarity=0.247 Sum_probs=52.8
Q ss_pred CCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHHH
Q 024521 164 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 243 (266)
Q Consensus 164 ~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~~ 243 (266)
..+|||+++|+.|.+++......++.... .+ .++.++.+|||+++.++|+++
T Consensus 227 i~~P~lii~G~~D~~~~~~~~~~~~~~~~---------------------------~~-~~~~~i~~~gH~~~~e~p~~v 278 (295)
T PRK03592 227 SDVPKLLINAEPGAILTTGAIRDWCRSWP---------------------------NQ-LEITVFGAGLHFAQEDSPEEI 278 (295)
T ss_pred CCCCeEEEeccCCcccCcHHHHHHHHHhh---------------------------hh-cceeeccCcchhhhhcCHHHH
Confidence 37899999999999997666666665521 23 666888999999999999999
Q ss_pred HHHHHHHhCCCCC
Q 024521 244 LHLFSSFVHGRRL 256 (266)
Q Consensus 244 ~~~i~~fl~~~~~ 256 (266)
.+.+.+|+.+...
T Consensus 279 ~~~i~~fl~~~~~ 291 (295)
T PRK03592 279 GAAIAAWLRRLRL 291 (295)
T ss_pred HHHHHHHHHHhcc
Confidence 9999999975443
No 23
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.23 E-value=1e-10 Score=97.45 Aligned_cols=61 Identities=25% Similarity=0.376 Sum_probs=51.2
Q ss_pred hCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHH
Q 024521 163 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 242 (266)
Q Consensus 163 ~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~ 242 (266)
+..+||++++|+.|.++|....+.+.+.+ .+ .++.++.++||+++.++|+.
T Consensus 191 ~~~~Pvlii~g~~D~~~~~~~~~~~~~~~----------------------------~~-~~~~~~~~~gH~~~~~~p~~ 241 (251)
T TIGR02427 191 AIAVPTLCIAGDQDGSTPPELVREIADLV----------------------------PG-ARFAEIRGAGHIPCVEQPEA 241 (251)
T ss_pred hcCCCeEEEEeccCCcCChHHHHHHHHhC----------------------------CC-ceEEEECCCCCcccccChHH
Confidence 34789999999999999987666655551 33 67789999999999999999
Q ss_pred HHHHHHHHhC
Q 024521 243 ALHLFSSFVH 252 (266)
Q Consensus 243 ~~~~i~~fl~ 252 (266)
..+.+.+|+.
T Consensus 242 ~~~~i~~fl~ 251 (251)
T TIGR02427 242 FNAALRDFLR 251 (251)
T ss_pred HHHHHHHHhC
Confidence 9999999984
No 24
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.22 E-value=1.3e-10 Score=103.67 Aligned_cols=64 Identities=17% Similarity=0.259 Sum_probs=52.3
Q ss_pred CCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHH-
Q 024521 164 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR- 242 (266)
Q Consensus 164 ~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~- 242 (266)
-.+|+||++|+.|.+|+...++.+.+++. . .+ .++.++.++||+++.++|++
T Consensus 278 i~~P~Lii~G~~D~vv~~~~~~~l~~~~~----~----------------------~~-~~l~~i~~~gH~l~~e~p~~~ 330 (349)
T PLN02385 278 VSLPLLILHGEADKVTDPSVSKFLYEKAS----S----------------------SD-KKLKLYEDAYHSILEGEPDEM 330 (349)
T ss_pred CCCCEEEEEeCCCCccChHHHHHHHHHcC----C----------------------CC-ceEEEeCCCeeecccCCChhh
Confidence 47899999999999999888877777631 1 13 67788999999999999987
Q ss_pred ---HHHHHHHHhCCC
Q 024521 243 ---ALHLFSSFVHGR 254 (266)
Q Consensus 243 ---~~~~i~~fl~~~ 254 (266)
+++.+.+||...
T Consensus 331 ~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 331 IFQVLDDIISWLDSH 345 (349)
T ss_pred HHHHHHHHHHHHHHh
Confidence 888888999643
No 25
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.20 E-value=2.7e-10 Score=102.82 Aligned_cols=59 Identities=15% Similarity=0.140 Sum_probs=49.8
Q ss_pred CCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHHHH
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 244 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~~~ 244 (266)
.+||||+.|+.|.+++....+.+.+. .+ .++.+|.+|||+++.|+|+++.
T Consensus 325 ~vPvLiI~G~~D~~v~~~~~~~~a~~-----------------------------~~-a~l~vIp~aGH~~~~E~Pe~v~ 374 (383)
T PLN03084 325 KTPITVCWGLRDRWLNYDGVEDFCKS-----------------------------SQ-HKLIELPMAGHHVQEDCGEELG 374 (383)
T ss_pred CCCEEEEeeCCCCCcCHHHHHHHHHh-----------------------------cC-CeEEEECCCCCCcchhCHHHHH
Confidence 68999999999999888766655554 12 5668999999999999999999
Q ss_pred HHHHHHhCC
Q 024521 245 HLFSSFVHG 253 (266)
Q Consensus 245 ~~i~~fl~~ 253 (266)
++|.+|+.+
T Consensus 375 ~~I~~Fl~~ 383 (383)
T PLN03084 375 GIISGILSK 383 (383)
T ss_pred HHHHHHhhC
Confidence 999999863
No 26
>PLN02578 hydrolase
Probab=99.18 E-value=2.6e-10 Score=102.11 Aligned_cols=65 Identities=17% Similarity=0.169 Sum_probs=48.4
Q ss_pred ccccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHH
Q 024521 4 NKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLL 79 (266)
Q Consensus 4 ~~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~ 79 (266)
.+..+|+.+|.| |.|.|..... .++....++++..|+++ ....+++|+|+|+||..+..+|....
T Consensus 110 ~~~~~v~~~D~~-G~G~S~~~~~---~~~~~~~a~~l~~~i~~-------~~~~~~~lvG~S~Gg~ia~~~A~~~p 174 (354)
T PLN02578 110 AKKYKVYALDLL-GFGWSDKALI---EYDAMVWRDQVADFVKE-------VVKEPAVLVGNSLGGFTALSTAVGYP 174 (354)
T ss_pred hcCCEEEEECCC-CCCCCCCccc---ccCHHHHHHHHHHHHHH-------hccCCeEEEEECHHHHHHHHHHHhCh
Confidence 356899999999 9999865322 23556667787777775 33468999999999987777777543
No 27
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.16 E-value=1.8e-10 Score=96.88 Aligned_cols=60 Identities=22% Similarity=0.236 Sum_probs=44.5
Q ss_pred ccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHH
Q 024521 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADV 77 (266)
Q Consensus 6 ~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~ 77 (266)
.++++.+|.| |.|.|..... .+-...++++.+++.. +...+++++|+||||..+..+|..
T Consensus 27 ~~~vi~~D~~-G~G~S~~~~~----~~~~~~~~~l~~~l~~-------~~~~~~~lvG~S~Gg~va~~~a~~ 86 (242)
T PRK11126 27 DYPRLYIDLP-GHGGSAAISV----DGFADVSRLLSQTLQS-------YNILPYWLVGYSLGGRIAMYYACQ 86 (242)
T ss_pred CCCEEEecCC-CCCCCCCccc----cCHHHHHHHHHHHHHH-------cCCCCeEEEEECHHHHHHHHHHHh
Confidence 4899999999 9999864321 2445666676666653 445799999999999777777765
No 28
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.16 E-value=1.1e-11 Score=101.62 Aligned_cols=64 Identities=19% Similarity=0.238 Sum_probs=47.4
Q ss_pred cccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHH
Q 024521 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADV 77 (266)
Q Consensus 5 ~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~ 77 (266)
+..+++.+|.| |+|.|..... ....+..+.++++.++++. +...+++|+|+|+||.++..+|..
T Consensus 23 ~~~~v~~~d~~-G~G~s~~~~~-~~~~~~~~~~~~l~~~l~~-------~~~~~~~lvG~S~Gg~~a~~~a~~ 86 (228)
T PF12697_consen 23 RGYRVIAFDLP-GHGRSDPPPD-YSPYSIEDYAEDLAELLDA-------LGIKKVILVGHSMGGMIALRLAAR 86 (228)
T ss_dssp TTSEEEEEECT-TSTTSSSHSS-GSGGSHHHHHHHHHHHHHH-------TTTSSEEEEEETHHHHHHHHHHHH
T ss_pred CCCEEEEEecC-Cccccccccc-cCCcchhhhhhhhhhcccc-------cccccccccccccccccccccccc
Confidence 56899999999 9999876542 1123556667777777764 444789999999999877777765
No 29
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.15 E-value=2.3e-10 Score=95.03 Aligned_cols=62 Identities=18% Similarity=0.140 Sum_probs=50.8
Q ss_pred HHhCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccCh
Q 024521 161 IIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP 240 (266)
Q Consensus 161 Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP 240 (266)
+.+...|||+.+|+.|.+++....+.+.+.+ .+ .++.++.++||+++.++|
T Consensus 184 l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~----------------------------~~-~~~~~~~~~gH~~~~e~p 234 (245)
T TIGR01738 184 LQNISVPFLRLYGYLDGLVPAKVVPYLDKLA----------------------------PH-SELYIFAKAAHAPFLSHA 234 (245)
T ss_pred HhcCCCCEEEEeecCCcccCHHHHHHHHHhC----------------------------CC-CeEEEeCCCCCCccccCH
Confidence 3344789999999999999977666554441 23 667889999999999999
Q ss_pred HHHHHHHHHHh
Q 024521 241 SRALHLFSSFV 251 (266)
Q Consensus 241 ~~~~~~i~~fl 251 (266)
++..+++.+||
T Consensus 235 ~~~~~~i~~fi 245 (245)
T TIGR01738 235 EAFCALLVAFK 245 (245)
T ss_pred HHHHHHHHhhC
Confidence 99999999986
No 30
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.15 E-value=6e-10 Score=98.90 Aligned_cols=62 Identities=16% Similarity=0.331 Sum_probs=50.6
Q ss_pred CCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccC-hHHH
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQ-PSRA 243 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dq-P~~~ 243 (266)
.+|+|+++|+.|.+|+..+++.+.+++ .. .+ .++.++.+++|++..+. ++++
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~~----~~----------------------~~-~~l~~~~g~~H~i~~E~~~~~v 322 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNKL----SI----------------------SN-KELHTLEDMDHVITIEPGNEEV 322 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhc----cC----------------------CC-cEEEEECCCCCCCccCCCHHHH
Confidence 589999999999999999888877762 11 12 56678999999999986 6889
Q ss_pred HHHHHHHhCC
Q 024521 244 LHLFSSFVHG 253 (266)
Q Consensus 244 ~~~i~~fl~~ 253 (266)
++-+.+||.+
T Consensus 323 ~~~i~~wL~~ 332 (332)
T TIGR01607 323 LKKIIEWISN 332 (332)
T ss_pred HHHHHHHhhC
Confidence 9988899853
No 31
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.13 E-value=8.6e-10 Score=97.56 Aligned_cols=64 Identities=23% Similarity=0.282 Sum_probs=51.2
Q ss_pred hCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHH
Q 024521 163 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 242 (266)
Q Consensus 163 ~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~ 242 (266)
+..+||||.+|+.|.+||...++.+.+.+. . .+ .++..+.++||++..++|+.
T Consensus 249 ~i~~PvLii~G~~D~ivp~~~~~~l~~~i~----~----------------------~~-~~l~~~~~a~H~~~~e~pd~ 301 (330)
T PLN02298 249 DVSIPFIVLHGSADVVTDPDVSRALYEEAK----S----------------------ED-KTIKIYDGMMHSLLFGEPDE 301 (330)
T ss_pred hcCCCEEEEecCCCCCCCHHHHHHHHHHhc----c----------------------CC-ceEEEcCCcEeeeecCCCHH
Confidence 347899999999999999998888877732 1 13 67788999999999999964
Q ss_pred ----HHHHHHHHhCC
Q 024521 243 ----ALHLFSSFVHG 253 (266)
Q Consensus 243 ----~~~~i~~fl~~ 253 (266)
+.+-+.+||..
T Consensus 302 ~~~~~~~~i~~fl~~ 316 (330)
T PLN02298 302 NIEIVRRDILSWLNE 316 (330)
T ss_pred HHHHHHHHHHHHHHH
Confidence 56667778864
No 32
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.11 E-value=5.5e-10 Score=100.04 Aligned_cols=62 Identities=26% Similarity=0.435 Sum_probs=49.3
Q ss_pred HHHhCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccC
Q 024521 160 RIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQ 239 (266)
Q Consensus 160 ~Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dq 239 (266)
.+.+..+|||+.+|+.|.+||....+ .+ +++ +++.++.++||+.+.++
T Consensus 309 ~l~~i~~Pvlii~g~~D~~vp~~~~~----~l---------------------------~~~-~~~~~~~~~gH~~~~e~ 356 (371)
T PRK14875 309 RLASLAIPVLVIWGEQDRIIPAAHAQ----GL---------------------------PDG-VAVHVLPGAGHMPQMEA 356 (371)
T ss_pred HHhcCCCCEEEEEECCCCccCHHHHh----hc---------------------------cCC-CeEEEeCCCCCChhhhC
Confidence 34345789999999999999864322 21 123 77889999999999999
Q ss_pred hHHHHHHHHHHhCC
Q 024521 240 PSRALHLFSSFVHG 253 (266)
Q Consensus 240 P~~~~~~i~~fl~~ 253 (266)
|+.+.+.|.+|+.+
T Consensus 357 p~~~~~~i~~fl~~ 370 (371)
T PRK14875 357 AADVNRLLAEFLGK 370 (371)
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999999964
No 33
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.09 E-value=8.2e-10 Score=91.67 Aligned_cols=60 Identities=23% Similarity=0.414 Sum_probs=44.7
Q ss_pred hCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHH
Q 024521 163 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 242 (266)
Q Consensus 163 ~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~ 242 (266)
....|+|+.+|..|..++- ..+.+... ..+ .++.++.++||+++.++|+.
T Consensus 192 ~~~~P~l~i~g~~D~~~~~-----~~~~~~~~------------------------~~~-~~~~~~~~~gH~~~~e~~~~ 241 (251)
T TIGR03695 192 ALTIPVLYLCGEKDEKFVQ-----IAKEMQKL------------------------LPN-LTLVIIANAGHNIHLENPEA 241 (251)
T ss_pred CCCCceEEEeeCcchHHHH-----HHHHHHhc------------------------CCC-CcEEEEcCCCCCcCccChHH
Confidence 3478999999999976531 11221110 133 77789999999999999999
Q ss_pred HHHHHHHHhC
Q 024521 243 ALHLFSSFVH 252 (266)
Q Consensus 243 ~~~~i~~fl~ 252 (266)
..+.+.+|++
T Consensus 242 ~~~~i~~~l~ 251 (251)
T TIGR03695 242 FAKILLAFLE 251 (251)
T ss_pred HHHHHHHHhC
Confidence 9999999984
No 34
>PRK10749 lysophospholipase L2; Provisional
Probab=99.06 E-value=1.2e-09 Score=96.89 Aligned_cols=69 Identities=14% Similarity=0.172 Sum_probs=52.5
Q ss_pred CCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccCh---
Q 024521 164 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP--- 240 (266)
Q Consensus 164 ~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP--- 240 (266)
..+||||.+|+.|.+|+..+++.+.+.++..... ..+ .++.++.+|||++..|+|
T Consensus 258 i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~---------------------~~~-~~l~~~~gagH~~~~E~~~~r 315 (330)
T PRK10749 258 ITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHP---------------------CEG-GKPLVIKGAYHEILFEKDAMR 315 (330)
T ss_pred CCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCC---------------------CCC-ceEEEeCCCcchhhhCCcHHH
Confidence 4689999999999999999998888875421111 123 567999999999999987
Q ss_pred HHHHHHHHHHhCCC
Q 024521 241 SRALHLFSSFVHGR 254 (266)
Q Consensus 241 ~~~~~~i~~fl~~~ 254 (266)
+.+++-+.+||...
T Consensus 316 ~~v~~~i~~fl~~~ 329 (330)
T PRK10749 316 SVALNAIVDFFNRH 329 (330)
T ss_pred HHHHHHHHHHHhhc
Confidence 55667777788653
No 35
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.05 E-value=3.1e-09 Score=93.90 Aligned_cols=60 Identities=30% Similarity=0.515 Sum_probs=52.1
Q ss_pred CCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHHHH
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 244 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~~~ 244 (266)
+.||||..|+.|.++|...++...++ ..| ..+..|.+|||.++.++|++..
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~----------------------------~pn-~~~~~I~~~gH~~h~e~Pe~~~ 314 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKK----------------------------LPN-AELVEIPGAGHLPHLERPEEVA 314 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhh----------------------------CCC-ceEEEeCCCCcccccCCHHHHH
Confidence 48999999999999999966555555 235 8999999999999999999999
Q ss_pred HHHHHHhCC
Q 024521 245 HLFSSFVHG 253 (266)
Q Consensus 245 ~~i~~fl~~ 253 (266)
.+|..|+..
T Consensus 315 ~~i~~Fi~~ 323 (326)
T KOG1454|consen 315 ALLRSFIAR 323 (326)
T ss_pred HHHHHHHHH
Confidence 999999964
No 36
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.02 E-value=1.3e-09 Score=97.19 Aligned_cols=62 Identities=18% Similarity=0.232 Sum_probs=52.0
Q ss_pred CCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcC-CcccCCccChHHH
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRG-AAHMVPYAQPSRA 243 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~-AGH~vp~dqP~~~ 243 (266)
.+|+||+.|+.|.++|....+.+.+.+. .+ .++++|.+ |||+++.|+|+++
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~---------------------------p~-a~l~~i~~~aGH~~~lE~Pe~~ 328 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG---------------------------PR-GSLRVLRSPYGHDAFLKETDRI 328 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC---------------------------CC-CeEEEEeCCccHHHHhcCHHHH
Confidence 6799999999999999887777777631 13 66788984 9999999999999
Q ss_pred HHHHHHHhCCC
Q 024521 244 LHLFSSFVHGR 254 (266)
Q Consensus 244 ~~~i~~fl~~~ 254 (266)
..++.+||...
T Consensus 329 ~~~l~~FL~~~ 339 (343)
T PRK08775 329 DAILTTALRST 339 (343)
T ss_pred HHHHHHHHHhc
Confidence 99999999643
No 37
>PRK07581 hypothetical protein; Validated
Probab=99.02 E-value=2.1e-09 Score=95.49 Aligned_cols=63 Identities=10% Similarity=0.119 Sum_probs=52.8
Q ss_pred HHhCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcC-CcccCCccC
Q 024521 161 IIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRG-AAHMVPYAQ 239 (266)
Q Consensus 161 Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~-AGH~vp~dq 239 (266)
|-+..+|||+++|+.|.++|....+.+.+.+ .+ .++++|.+ |||+++.+|
T Consensus 271 L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~i----------------------------p~-a~l~~i~~~~GH~~~~~~ 321 (339)
T PRK07581 271 LGSITAKTFVMPISTDLYFPPEDCEAEAALI----------------------------PN-AELRPIESIWGHLAGFGQ 321 (339)
T ss_pred HhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC----------------------------CC-CeEEEeCCCCCccccccC
Confidence 3334789999999999999988777665552 23 67789998 999999999
Q ss_pred hHHHHHHHHHHhC
Q 024521 240 PSRALHLFSSFVH 252 (266)
Q Consensus 240 P~~~~~~i~~fl~ 252 (266)
|+....++++||.
T Consensus 322 ~~~~~~~~~~~~~ 334 (339)
T PRK07581 322 NPADIAFIDAALK 334 (339)
T ss_pred cHHHHHHHHHHHH
Confidence 9999999999984
No 38
>PRK06489 hypothetical protein; Provisional
Probab=98.96 E-value=5.1e-09 Score=93.93 Aligned_cols=61 Identities=11% Similarity=0.157 Sum_probs=48.3
Q ss_pred hCCCcEEEEecCCccccCccch--HHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCC----cccCC
Q 024521 163 QNGIPVWVFSGDQDSVVPLLGS--RTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGA----AHMVP 236 (266)
Q Consensus 163 ~~~i~VLiy~G~~D~iv~~~g~--~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~A----GH~vp 236 (266)
+..+||||++|+.|.++|.... +.+.+.+ .+ .++++|.+| ||+++
T Consensus 290 ~I~~PvLvI~G~~D~~~p~~~~~~~~la~~i----------------------------p~-a~l~~i~~a~~~~GH~~~ 340 (360)
T PRK06489 290 KIKAPVLAINSADDERNPPETGVMEAALKRV----------------------------KH-GRLVLIPASPETRGHGTT 340 (360)
T ss_pred hCCCCEEEEecCCCcccChhhHHHHHHHHhC----------------------------cC-CeEEEECCCCCCCCcccc
Confidence 3478999999999999987654 3333331 33 677999996 99986
Q ss_pred ccChHHHHHHHHHHhCC
Q 024521 237 YAQPSRALHLFSSFVHG 253 (266)
Q Consensus 237 ~dqP~~~~~~i~~fl~~ 253 (266)
++|++..++|.+|+..
T Consensus 341 -e~P~~~~~~i~~FL~~ 356 (360)
T PRK06489 341 -GSAKFWKAYLAEFLAQ 356 (360)
T ss_pred -cCHHHHHHHHHHHHHh
Confidence 8999999999999964
No 39
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.95 E-value=1.3e-08 Score=91.03 Aligned_cols=65 Identities=22% Similarity=0.301 Sum_probs=51.3
Q ss_pred hCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEE-cCCcccCCccChH
Q 024521 163 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTV-RGAAHMVPYAQPS 241 (266)
Q Consensus 163 ~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V-~~AGH~vp~dqP~ 241 (266)
+..+|+|++.|+.|.++|....+...+.+... +. . .+|+.| .+|||+++.++|+
T Consensus 286 ~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~-~~-----------------------~-v~~~~i~~~~GH~~~le~p~ 340 (351)
T TIGR01392 286 RIKAPFLVVSITSDWLFPPAESRELAKALPAA-GL-----------------------R-VTYVEIESPYGHDAFLVETD 340 (351)
T ss_pred hCCCCEEEEEeCCccccCHHHHHHHHHHHhhc-CC-----------------------c-eEEEEeCCCCCcchhhcCHH
Confidence 33789999999999999998888777765321 00 1 355566 4899999999999
Q ss_pred HHHHHHHHHhC
Q 024521 242 RALHLFSSFVH 252 (266)
Q Consensus 242 ~~~~~i~~fl~ 252 (266)
+..+.|.+||+
T Consensus 341 ~~~~~l~~FL~ 351 (351)
T TIGR01392 341 QVEELIRGFLR 351 (351)
T ss_pred HHHHHHHHHhC
Confidence 99999999984
No 40
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.95 E-value=4.4e-09 Score=91.23 Aligned_cols=72 Identities=17% Similarity=0.327 Sum_probs=52.3
Q ss_pred cccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHhcc
Q 024521 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNA 83 (266)
Q Consensus 5 ~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~~~ 83 (266)
+.-||..||+| |-|+|.... +..+.+..-..+++-+.+|....- + .+.+|+|||+||..+...|.+-.++.+
T Consensus 115 ~~~~vyaiDll-G~G~SSRP~---F~~d~~~~e~~fvesiE~WR~~~~-L--~KmilvGHSfGGYLaa~YAlKyPerV~ 186 (365)
T KOG4409|consen 115 KIRNVYAIDLL-GFGRSSRPK---FSIDPTTAEKEFVESIEQWRKKMG-L--EKMILVGHSFGGYLAAKYALKYPERVE 186 (365)
T ss_pred hcCceEEeccc-CCCCCCCCC---CCCCcccchHHHHHHHHHHHHHcC-C--cceeEeeccchHHHHHHHHHhChHhhc
Confidence 46789999999 999997643 222333444578888888888762 3 479999999999777777776655543
No 41
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.94 E-value=4.4e-09 Score=95.75 Aligned_cols=60 Identities=15% Similarity=0.105 Sum_probs=45.9
Q ss_pred CCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHHH
Q 024521 164 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 243 (266)
Q Consensus 164 ~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~~ 243 (266)
-.+||+++.|+.|.+++ ...+.+.+.+ + .+ .++++|.+|||+++.|+|+..
T Consensus 324 I~vP~liI~G~~D~i~~-~~~~~~~~~~----~-----------------------~~-~~~~~i~~aGH~~~~E~P~~f 374 (402)
T PLN02894 324 WKVPTTFIYGRHDWMNY-EGAVEARKRM----K-----------------------VP-CEIIRVPQGGHFVFLDNPSGF 374 (402)
T ss_pred CCCCEEEEEeCCCCCCc-HHHHHHHHHc----C-----------------------CC-CcEEEeCCCCCeeeccCHHHH
Confidence 37899999999998765 3343343331 0 12 567999999999999999999
Q ss_pred HHHHHHHhC
Q 024521 244 LHLFSSFVH 252 (266)
Q Consensus 244 ~~~i~~fl~ 252 (266)
.+++.+|+.
T Consensus 375 ~~~l~~~~~ 383 (402)
T PLN02894 375 HSAVLYACR 383 (402)
T ss_pred HHHHHHHHH
Confidence 999888875
No 42
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.94 E-value=8.6e-09 Score=95.26 Aligned_cols=67 Identities=13% Similarity=0.187 Sum_probs=54.6
Q ss_pred HHHHH-hCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCC
Q 024521 158 LKRII-QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVP 236 (266)
Q Consensus 158 l~~Ll-~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp 236 (266)
+..++ +..+||||++|+.|.++|....+.+.+.+ .+ .++.++.+|||+.+
T Consensus 410 l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~i----------------------------P~-a~l~vI~~aGH~~~ 460 (481)
T PLN03087 410 LDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKV----------------------------PR-ARVKVIDDKDHITI 460 (481)
T ss_pred HHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhC----------------------------CC-CEEEEeCCCCCcch
Confidence 34444 24789999999999999988887766652 23 67789999999999
Q ss_pred c-cChHHHHHHHHHHhCC
Q 024521 237 Y-AQPSRALHLFSSFVHG 253 (266)
Q Consensus 237 ~-dqP~~~~~~i~~fl~~ 253 (266)
. ++|+...+.+.+|...
T Consensus 461 v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 461 VVGRQKEFARELEEIWRR 478 (481)
T ss_pred hhcCHHHHHHHHHHHhhc
Confidence 6 9999999999999864
No 43
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.89 E-value=1.4e-08 Score=92.11 Aligned_cols=63 Identities=19% Similarity=0.228 Sum_probs=52.0
Q ss_pred CCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCcc-ChHH
Q 024521 164 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYA-QPSR 242 (266)
Q Consensus 164 ~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~d-qP~~ 242 (266)
-.+|+||.+|+.|.+||...++.+.+++.. .. -++..+.+++|++..+ .|++
T Consensus 323 I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~--------------------------~~-k~l~~~~ga~H~l~~e~~~e~ 375 (395)
T PLN02652 323 VTVPFMVLHGTADRVTDPLASQDLYNEAAS--------------------------RH-KDIKLYDGFLHDLLFEPEREE 375 (395)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhcCC--------------------------CC-ceEEEECCCeEEeccCCCHHH
Confidence 478999999999999999999988887321 01 3446789999999887 8999
Q ss_pred HHHHHHHHhCC
Q 024521 243 ALHLFSSFVHG 253 (266)
Q Consensus 243 ~~~~i~~fl~~ 253 (266)
+++-+.+||.+
T Consensus 376 v~~~I~~FL~~ 386 (395)
T PLN02652 376 VGRDIIDWMEK 386 (395)
T ss_pred HHHHHHHHHHH
Confidence 99999999974
No 44
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.86 E-value=7.3e-09 Score=108.52 Aligned_cols=79 Identities=14% Similarity=0.229 Sum_probs=52.3
Q ss_pred HHhCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccCh
Q 024521 161 IIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP 240 (266)
Q Consensus 161 Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP 240 (266)
|-+...|+|++.|+.|.+++ ...+.+.+.+....... .. ..+.. ..+++|.+|||+++.|+|
T Consensus 1564 L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~-~~---------------~~~~~-a~lvvI~~aGH~~~lE~P 1625 (1655)
T PLN02980 1564 LKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESG-ND---------------KGKEI-IEIVEIPNCGHAVHLENP 1625 (1655)
T ss_pred HhhCCCCEEEEEECCCCccH-HHHHHHHHHcccccccc-cc---------------ccccc-eEEEEECCCCCchHHHCH
Confidence 33447899999999998775 22333333321100000 00 00122 578999999999999999
Q ss_pred HHHHHHHHHHhCCCCCC
Q 024521 241 SRALHLFSSFVHGRRLP 257 (266)
Q Consensus 241 ~~~~~~i~~fl~~~~~~ 257 (266)
++..+.|.+||.+..-+
T Consensus 1626 e~f~~~I~~FL~~~~~~ 1642 (1655)
T PLN02980 1626 LPVIRALRKFLTRLHNS 1642 (1655)
T ss_pred HHHHHHHHHHHHhcccc
Confidence 99999999999875543
No 45
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.83 E-value=6.6e-08 Score=83.55 Aligned_cols=67 Identities=13% Similarity=0.156 Sum_probs=50.9
Q ss_pred ccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHh
Q 024521 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 81 (266)
Q Consensus 6 ~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~ 81 (266)
...++.+|++ |-|+|..... -..++....+.|+..+|.. +..+.++++|++||+..+=.+|....+.
T Consensus 71 ~~rviA~Dlr-GyG~Sd~P~~-~~~Yt~~~l~~di~~lld~-------Lg~~k~~lvgHDwGaivaw~la~~~Per 137 (322)
T KOG4178|consen 71 GYRVIAPDLR-GYGFSDAPPH-ISEYTIDELVGDIVALLDH-------LGLKKAFLVGHDWGAIVAWRLALFYPER 137 (322)
T ss_pred ceEEEecCCC-CCCCCCCCCC-cceeeHHHHHHHHHHHHHH-------hccceeEEEeccchhHHHHHHHHhChhh
Confidence 3789999999 9999977543 1234677778888777774 6677899999999998777777665444
No 46
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.82 E-value=4.8e-08 Score=88.30 Aligned_cols=65 Identities=17% Similarity=0.166 Sum_probs=53.1
Q ss_pred CCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEc-CCcccCCccChHH
Q 024521 164 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVR-GAAHMVPYAQPSR 242 (266)
Q Consensus 164 ~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~-~AGH~vp~dqP~~ 242 (266)
..+|+||+.|+.|.++|....+...+.+.... .. .+++.|. ++||+.+.++|++
T Consensus 308 I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~------------------------~~-~~l~~i~~~~GH~~~le~p~~ 362 (379)
T PRK00175 308 IKARFLVVSFTSDWLFPPARSREIVDALLAAG------------------------AD-VSYAEIDSPYGHDAFLLDDPR 362 (379)
T ss_pred CCCCEEEEEECCccccCHHHHHHHHHHHHhcC------------------------CC-eEEEEeCCCCCchhHhcCHHH
Confidence 37899999999999999888877766653210 11 4678786 9999999999999
Q ss_pred HHHHHHHHhCC
Q 024521 243 ALHLFSSFVHG 253 (266)
Q Consensus 243 ~~~~i~~fl~~ 253 (266)
..+.|.+||.+
T Consensus 363 ~~~~L~~FL~~ 373 (379)
T PRK00175 363 YGRLVRAFLER 373 (379)
T ss_pred HHHHHHHHHHh
Confidence 99999999975
No 47
>PLN02511 hydrolase
Probab=98.74 E-value=1.5e-08 Score=91.86 Aligned_cols=65 Identities=22% Similarity=0.257 Sum_probs=44.7
Q ss_pred cccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHH
Q 024521 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLAD 76 (266)
Q Consensus 5 ~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~ 76 (266)
+..+++-+|.| |.|-|.......+ ....++|+..++...-..+| ..+++++|+|+||..+..++.
T Consensus 128 ~g~~vv~~d~r-G~G~s~~~~~~~~---~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~ 192 (388)
T PLN02511 128 KGWRVVVFNSR-GCADSPVTTPQFY---SASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLG 192 (388)
T ss_pred CCCEEEEEecC-CCCCCCCCCcCEE---cCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHH
Confidence 56799999999 9998865433222 22345577777666555565 468999999999976555443
No 48
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.73 E-value=8.2e-08 Score=81.96 Aligned_cols=162 Identities=18% Similarity=0.148 Sum_probs=95.4
Q ss_pred cceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHhcccCC
Q 024521 7 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 86 (266)
Q Consensus 7 an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~~~~~~ 86 (266)
.-|-.+|++ |+|.|.+ ...+..+-+.+++|+..|+..+. ..+++.+.|.|++||||||..+..++.+ ...
T Consensus 83 ~~v~a~D~~-GhG~SdG--l~~yi~~~d~~v~D~~~~~~~i~-~~~e~~~lp~FL~GeSMGGAV~Ll~~~k----~p~-- 152 (313)
T KOG1455|consen 83 FAVYAIDYE-GHGRSDG--LHAYVPSFDLVVDDVISFFDSIK-EREENKGLPRFLFGESMGGAVALLIALK----DPN-- 152 (313)
T ss_pred CeEEEeecc-CCCcCCC--CcccCCcHHHHHHHHHHHHHHHh-hccccCCCCeeeeecCcchHHHHHHHhh----CCc--
Confidence 346789999 9999986 44566677888888888777643 4557889999999999999555444443 221
Q ss_pred Cceeeechhh---cc-----c-------------cccCcCC----CchhhhhhhcCcHHHHHHhCCCCCCCCCCCccccc
Q 024521 87 GFKFNIKGVA---AT-----K-------------MSVGVDV----CMTLERFFYLNLPEVQKALHANRTNLPYGWSMCSG 141 (266)
Q Consensus 87 ~~~~nl~Gi~---~~-----~-------------~~~~~~~----c~~~~~~~yln~~~V~~aL~v~~~~~~~~~~~~~~ 141 (266)
-..|++ |. . +....+. -..+....-..+|+.|+.+.-++. |..
T Consensus 153 ----~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl--------~y~ 220 (313)
T KOG1455|consen 153 ----FWDGAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPL--------CYT 220 (313)
T ss_pred ----ccccceeeecccccCCccCCCcHHHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCc--------eec
Confidence 233332 10 0 0000000 001123345667777777755432 221
Q ss_pred c-ccccCCCCCCChHHHHHHHH-hCCCcEEEEecCCccccCccchHHHHHH
Q 024521 142 V-LNYSDTDSNINILPVLKRII-QNGIPVWVFSGDQDSVVPLLGSRTLIRE 190 (266)
Q Consensus 142 ~-v~~~~~d~~~~~~~~l~~Ll-~~~i~VLiy~G~~D~iv~~~g~~~~i~~ 190 (266)
. ......-.+..+...++..+ +-.+|++|.||+.|.+|-..+++.+.+.
T Consensus 221 g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~ 271 (313)
T KOG1455|consen 221 GKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEK 271 (313)
T ss_pred CCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHHHHHHHh
Confidence 1 00000001112222333333 3368999999999999999999998887
No 49
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.71 E-value=2e-07 Score=81.55 Aligned_cols=65 Identities=17% Similarity=0.254 Sum_probs=52.6
Q ss_pred hCCCcEEEEecCCccccC-ccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccCh-
Q 024521 163 QNGIPVWVFSGDQDSVVP-LLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP- 240 (266)
Q Consensus 163 ~~~i~VLiy~G~~D~iv~-~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP- 240 (266)
...+||||.+|..|.+|. ..+...++++ .+. .+ .++..+.||.|.+..|.+
T Consensus 226 ~~~~PvLll~g~~D~vv~~~~~~~~~~~~----~~~----------------------~~-~~~~~~~g~~He~~~E~~~ 278 (298)
T COG2267 226 AIALPVLLLQGGDDRVVDNVEGLARFFER----AGS----------------------PD-KELKVIPGAYHELLNEPDR 278 (298)
T ss_pred cccCCEEEEecCCCccccCcHHHHHHHHh----cCC----------------------CC-ceEEecCCcchhhhcCcch
Confidence 347899999999999999 6888888887 333 23 677999999999999875
Q ss_pred --HHHHHHHHHHhCCC
Q 024521 241 --SRALHLFSSFVHGR 254 (266)
Q Consensus 241 --~~~~~~i~~fl~~~ 254 (266)
+++++-+.+|+...
T Consensus 279 ~r~~~~~~~~~~l~~~ 294 (298)
T COG2267 279 AREEVLKDILAWLAEA 294 (298)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 58889999998653
No 50
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=98.68 E-value=1.6e-07 Score=81.00 Aligned_cols=59 Identities=14% Similarity=0.139 Sum_probs=47.8
Q ss_pred CCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHHHH
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 244 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~~~ 244 (266)
.+|++++.|..|.++|....+.+.+.+. . -+.+.+. +||+.++++|+...
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~----------------------------~-~~~~~l~-~gH~p~ls~P~~~~ 260 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP----------------------------P-SQVYELE-SDHSPFFSTPFLLF 260 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC----------------------------c-cEEEEEC-CCCCccccCHHHHH
Confidence 5799999999999999887776666621 1 3456774 99999999999999
Q ss_pred HHHHHHhCC
Q 024521 245 HLFSSFVHG 253 (266)
Q Consensus 245 ~~i~~fl~~ 253 (266)
.+|.++...
T Consensus 261 ~~i~~~a~~ 269 (273)
T PLN02211 261 GLLIKAAAS 269 (273)
T ss_pred HHHHHHHHH
Confidence 999988643
No 51
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.67 E-value=1.5e-08 Score=83.87 Aligned_cols=57 Identities=21% Similarity=0.375 Sum_probs=48.8
Q ss_pred hCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHH
Q 024521 163 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 242 (266)
Q Consensus 163 ~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~ 242 (266)
+..+|+|+++|+.|.++|....+.+.+.+ .+ .+++++.++||....+.|++
T Consensus 173 ~i~~p~l~i~~~~D~~~p~~~~~~~~~~~----------------------------~~-~~~~~~~~~GH~~~~~~~~~ 223 (230)
T PF00561_consen 173 NIKVPTLIIWGEDDPLVPPESSEQLAKLI----------------------------PN-SQLVLIEGSGHFAFLEGPDE 223 (230)
T ss_dssp TTTSEEEEEEETTCSSSHHHHHHHHHHHS----------------------------TT-EEEEEETTCCSTHHHHSHHH
T ss_pred ccCCCeEEEEeCCCCCCCHHHHHHHHHhc----------------------------CC-CEEEECCCCChHHHhcCHHh
Confidence 45789999999999999998888755551 34 77799999999999999999
Q ss_pred HHHHHH
Q 024521 243 ALHLFS 248 (266)
Q Consensus 243 ~~~~i~ 248 (266)
..++|.
T Consensus 224 ~~~~i~ 229 (230)
T PF00561_consen 224 FNEIII 229 (230)
T ss_dssp HHHHHH
T ss_pred hhhhhc
Confidence 999885
No 52
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.65 E-value=6.2e-07 Score=78.57 Aligned_cols=65 Identities=11% Similarity=0.138 Sum_probs=44.2
Q ss_pred cccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHH
Q 024521 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVL 78 (266)
Q Consensus 5 ~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i 78 (266)
+..+|+.+|+| |+|.|..... ....+..+.++++..++.. +...+++++|+||||..+..+|..-
T Consensus 52 ~~~~vi~~D~~-G~G~S~~~~~-~~~~~~~~~~~dl~~l~~~-------l~~~~~~lvG~S~GG~ia~~~a~~~ 116 (306)
T TIGR01249 52 ETYRIVLFDQR-GCGKSTPHAC-LEENTTWDLVADIEKLREK-------LGIKNWLVFGGSWGSTLALAYAQTH 116 (306)
T ss_pred cCCEEEEECCC-CCCCCCCCCC-cccCCHHHHHHHHHHHHHH-------cCCCCEEEEEECHHHHHHHHHHHHC
Confidence 45789999999 9999974321 1123344556665555443 3345799999999998777777653
No 53
>PRK05855 short chain dehydrogenase; Validated
Probab=98.63 E-value=2.7e-07 Score=87.44 Aligned_cols=63 Identities=13% Similarity=0.052 Sum_probs=44.4
Q ss_pred cccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHH
Q 024521 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLA 75 (266)
Q Consensus 5 ~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la 75 (266)
+..+|+.+|+| |+|.|...... ...+....++|+..+++..- ...|++|+|+||||..+-.++
T Consensus 50 ~~~~Vi~~D~~-G~G~S~~~~~~-~~~~~~~~a~dl~~~i~~l~------~~~~~~lvGhS~Gg~~a~~~a 112 (582)
T PRK05855 50 DRFRVVAYDVR-GAGRSSAPKRT-AAYTLARLADDFAAVIDAVS------PDRPVHLLAHDWGSIQGWEAV 112 (582)
T ss_pred cceEEEEecCC-CCCCCCCCCcc-cccCHHHHHHHHHHHHHHhC------CCCcEEEEecChHHHHHHHHH
Confidence 45789999999 99999753321 12466778888888887521 134799999999995554443
No 54
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=98.62 E-value=4.8e-08 Score=89.26 Aligned_cols=184 Identities=15% Similarity=0.152 Sum_probs=100.2
Q ss_pred cccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHhccc
Q 024521 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH 84 (266)
Q Consensus 5 ~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~~~~ 84 (266)
+..+||-+|.| |+|.|..... ..+ ...+...+.+++...|.....++.|+|+|+||.+++.+|..-.
T Consensus 221 ~Gy~vl~~D~p-G~G~s~~~~~---~~d----~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p----- 287 (414)
T PRK05077 221 RGIAMLTIDMP-SVGFSSKWKL---TQD----SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEP----- 287 (414)
T ss_pred CCCEEEEECCC-CCCCCCCCCc---ccc----HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCC-----
Confidence 34899999999 9999854211 111 1122244556666677777788999999999988888775321
Q ss_pred CCCceeeechhhccccccCcCCCchhhhhhhcCcH-----HHHHHhCCCCCCCCCCCccccccccccCCCCCCChHHHHH
Q 024521 85 SKGFKFNIKGVAATKMSVGVDVCMTLERFFYLNLP-----EVQKALHANRTNLPYGWSMCSGVLNYSDTDSNINILPVLK 159 (266)
Q Consensus 85 ~~~~~~nl~Gi~~~~~~~~~~~c~~~~~~~yln~~-----~V~~aL~v~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~l~ 159 (266)
-.+++++.- ....+.... ....+-..+ .+...++.... .+......+ ...... ..
T Consensus 288 -----~ri~a~V~~--~~~~~~~~~-~~~~~~~~p~~~~~~la~~lg~~~~----~~~~l~~~l----~~~sl~----~~ 347 (414)
T PRK05077 288 -----PRLKAVACL--GPVVHTLLT-DPKRQQQVPEMYLDVLASRLGMHDA----SDEALRVEL----NRYSLK----VQ 347 (414)
T ss_pred -----cCceEEEEE--CCccchhhc-chhhhhhchHHHHHHHHHHhCCCCC----ChHHHHHHh----hhccch----hh
Confidence 124444300 000000000 000000011 11122222110 111100000 000000 01
Q ss_pred HHH--hCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCc
Q 024521 160 RII--QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPY 237 (266)
Q Consensus 160 ~Ll--~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~ 237 (266)
.++ ...+|||+++|+.|.+||....+.+.+.. .+ .+++.+.++ | .+
T Consensus 348 ~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~----------------------------~~-~~l~~i~~~-~--~~ 395 (414)
T PRK05077 348 GLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSS----------------------------AD-GKLLEIPFK-P--VY 395 (414)
T ss_pred hhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhC----------------------------CC-CeEEEccCC-C--cc
Confidence 112 23689999999999999999998665551 23 566888887 3 34
Q ss_pred cChHHHHHHHHHHhCC
Q 024521 238 AQPSRALHLFSSFVHG 253 (266)
Q Consensus 238 dqP~~~~~~i~~fl~~ 253 (266)
++|+.++..+.+||..
T Consensus 396 e~~~~~~~~i~~wL~~ 411 (414)
T PRK05077 396 RNFDKALQEISDWLED 411 (414)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 6999999999999964
No 55
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.61 E-value=3.8e-07 Score=82.61 Aligned_cols=71 Identities=11% Similarity=0.079 Sum_probs=56.0
Q ss_pred HHHHhCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcC-CcccCCc
Q 024521 159 KRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRG-AAHMVPY 237 (266)
Q Consensus 159 ~~Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~-AGH~vp~ 237 (266)
+.|.....|||++.|+.|.++|....+...+.+... ..+ .++.+|.+ +||+.+.
T Consensus 317 ~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~------------------------~~~-a~l~~I~s~~GH~~~l 371 (389)
T PRK06765 317 EALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQ------------------------GKY-AEVYEIESINGHMAGV 371 (389)
T ss_pred HHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhc------------------------CCC-eEEEEECCCCCcchhh
Confidence 334344799999999999999988777666664210 013 78899986 9999999
Q ss_pred cChHHHHHHHHHHhCCC
Q 024521 238 AQPSRALHLFSSFVHGR 254 (266)
Q Consensus 238 dqP~~~~~~i~~fl~~~ 254 (266)
++|++..++|.+|+..|
T Consensus 372 e~p~~~~~~I~~FL~~~ 388 (389)
T PRK06765 372 FDIHLFEKKIYEFLNRK 388 (389)
T ss_pred cCHHHHHHHHHHHHccc
Confidence 99999999999999764
No 56
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.48 E-value=6.3e-07 Score=74.24 Aligned_cols=190 Identities=15% Similarity=0.142 Sum_probs=99.7
Q ss_pred ccccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHhcc
Q 024521 4 NKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNA 83 (266)
Q Consensus 4 ~~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~~~ 83 (266)
.+.+.|+.+|...+.||+..-........-....+|+.++++...+.. ......+.|+|.||||+.+..++..-.+.-+
T Consensus 12 ~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~~~~~~f~ 90 (213)
T PF00326_consen 12 SQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAATQHPDRFK 90 (213)
T ss_dssp TTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHHHTCCGSS
T ss_pred hCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhcccceeee
Confidence 467889999999777766542221111223456778888887665554 5566789999999999766666552111000
Q ss_pred cCCCceeeechhhccccccCcCCCchhhhhhhcCcHHHHHHhCCCCCCCCCCCccccccccccCCCCCCChHHHHHHH--
Q 024521 84 HSKGFKFNIKGVAATKMSVGVDVCMTLERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSDTDSNINILPVLKRI-- 161 (266)
Q Consensus 84 ~~~~~~~nl~Gi~~~~~~~~~~~c~~~~~~~yln~~~V~~aL~v~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~l~~L-- 161 (266)
..+-..|+. |..........+... .....+. .|. + .........+
T Consensus 91 ----a~v~~~g~~--------d~~~~~~~~~~~~~~---~~~~~~~-----~~~--~-----------~~~~~~~s~~~~ 137 (213)
T PF00326_consen 91 ----AAVAGAGVS--------DLFSYYGTTDIYTKA---EYLEYGD-----PWD--N-----------PEFYRELSPISP 137 (213)
T ss_dssp ----EEEEESE-S--------STTCSBHHTCCHHHG---HHHHHSS-----TTT--S-----------HHHHHHHHHGGG
T ss_pred ----eeeccceec--------chhcccccccccccc---cccccCc-----cch--h-----------hhhhhhhccccc
Confidence 011222221 110000000000000 1111000 000 0 0011111111
Q ss_pred -Hh--CCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCcc
Q 024521 162 -IQ--NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYA 238 (266)
Q Consensus 162 -l~--~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~d 238 (266)
.+ ...||||++|+.|.+||...++.+.+.|... + .+ .++.+++++||-....
T Consensus 138 ~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~-g-----------------------~~-~~~~~~p~~gH~~~~~ 192 (213)
T PF00326_consen 138 ADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKA-G-----------------------KP-VELLIFPGEGHGFGNP 192 (213)
T ss_dssp GGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHT-T-----------------------SS-EEEEEETT-SSSTTSH
T ss_pred cccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhc-C-----------------------CC-EEEEEcCcCCCCCCCc
Confidence 12 4789999999999999999999999997631 1 13 8889999999955432
Q ss_pred C-hHHHHHHHHHHhC
Q 024521 239 Q-PSRALHLFSSFVH 252 (266)
Q Consensus 239 q-P~~~~~~i~~fl~ 252 (266)
+ .....+.+.+|+.
T Consensus 193 ~~~~~~~~~~~~f~~ 207 (213)
T PF00326_consen 193 ENRRDWYERILDFFD 207 (213)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHH
Confidence 2 2344555555553
No 57
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.45 E-value=3.9e-06 Score=72.45 Aligned_cols=62 Identities=19% Similarity=0.155 Sum_probs=43.7
Q ss_pred ccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHH
Q 024521 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLA 75 (266)
Q Consensus 6 ~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la 75 (266)
..+++.+|.| |+|.|.... .+.....+|+..+++.+-+..|.+ .+++++|+|+||..+..+|
T Consensus 57 G~~v~~~Dl~-G~G~S~~~~-----~~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a 118 (274)
T TIGR03100 57 GFPVLRFDYR-GMGDSEGEN-----LGFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYA 118 (274)
T ss_pred CCEEEEeCCC-CCCCCCCCC-----CCHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHh
Confidence 4799999999 999886432 133455677777777655555544 4699999999996555554
No 58
>PRK10566 esterase; Provisional
Probab=98.38 E-value=4.1e-06 Score=70.77 Aligned_cols=61 Identities=30% Similarity=0.387 Sum_probs=46.1
Q ss_pred CCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHHHH
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 244 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~~~ 244 (266)
..|+|+.+|+.|.++|...++.+.+.+... +. ..+ +++.++.++||.+. | ..+
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~-g~---------------------~~~-~~~~~~~~~~H~~~---~-~~~ 238 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRER-GL---------------------DKN-LTCLWEPGVRHRIT---P-EAL 238 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhc-CC---------------------Ccc-eEEEecCCCCCccC---H-HHH
Confidence 479999999999999999998888876421 11 013 88899999999974 4 356
Q ss_pred HHHHHHhC
Q 024521 245 HLFSSFVH 252 (266)
Q Consensus 245 ~~i~~fl~ 252 (266)
+-+.+||.
T Consensus 239 ~~~~~fl~ 246 (249)
T PRK10566 239 DAGVAFFR 246 (249)
T ss_pred HHHHHHHH
Confidence 66666875
No 59
>PRK13604 luxD acyl transferase; Provisional
Probab=98.30 E-value=1.7e-05 Score=69.02 Aligned_cols=64 Identities=16% Similarity=0.236 Sum_probs=47.1
Q ss_pred HHHHhCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCcc
Q 024521 159 KRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYA 238 (266)
Q Consensus 159 ~~Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~d 238 (266)
+.+-+.+.|||+++|+.|.+||..+++.+.+++.. ++ ..+..+.||+|... +
T Consensus 196 ~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s--------------------------~~-kkl~~i~Ga~H~l~-~ 247 (307)
T PRK13604 196 NKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRS--------------------------EQ-CKLYSLIGSSHDLG-E 247 (307)
T ss_pred HHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhcc--------------------------CC-cEEEEeCCCccccC-c
Confidence 33333369999999999999999999999988321 23 77899999999984 4
Q ss_pred ChHHHHHHHHHH
Q 024521 239 QPSRALHLFSSF 250 (266)
Q Consensus 239 qP~~~~~~i~~f 250 (266)
.+...-.+.+..
T Consensus 248 ~~~~~~~~~~~~ 259 (307)
T PRK13604 248 NLVVLRNFYQSV 259 (307)
T ss_pred chHHHHHHHHHH
Confidence 555544444433
No 60
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.25 E-value=4.8e-06 Score=80.02 Aligned_cols=191 Identities=14% Similarity=0.140 Sum_probs=101.7
Q ss_pred ccccceEEeeCCCCcccccc--cCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHh
Q 024521 4 NKASNLLFVESPAGVGWSYS--NTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 81 (266)
Q Consensus 4 ~~~an~l~iD~PvG~GfS~~--~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~ 81 (266)
.+.++||+++.---+||+.. ..... . --....+|+..++. |+...|..-...++|+|.|||| +++..++.+
T Consensus 421 ~~G~~V~~~n~RGS~GyG~~F~~~~~~-~-~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGG----ymtl~~~~~ 493 (620)
T COG1506 421 SAGYAVLAPNYRGSTGYGREFADAIRG-D-WGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGG----YMTLLAATK 493 (620)
T ss_pred cCCeEEEEeCCCCCCccHHHHHHhhhh-c-cCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHH----HHHHHHHhc
Confidence 56788999997744443321 11100 0 01133568888888 8899998888889999999999 555555544
Q ss_pred cccCCCceeeechhhccccccCcCCCchhhhhhhcCcHHHHHHhCCCCCCCCCCCccccccccccCCCCCCChHHHHHHH
Q 024521 82 NAHSKGFKFNIKGVAATKMSVGVDVCMTLERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSDTDSNINILPVLKRI 161 (266)
Q Consensus 82 ~~~~~~~~~nl~Gi~~~~~~~~~~~c~~~~~~~yln~~~V~~aL~v~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~l~~L 161 (266)
.. .++..+. ....+.. ....+..+...+-....... ..|. +.. .+. ..+.......+
T Consensus 494 ~~-------~f~a~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~--~~~---~~~--~~sp~~~~~~i 550 (620)
T COG1506 494 TP-------RFKAAVA-----VAGGVDW-LLYFGESTEGLRFDPEENGG---GPPE--DRE---KYE--DRSPIFYADNI 550 (620)
T ss_pred Cc-------hhheEEe-----ccCcchh-hhhccccchhhcCCHHHhCC---Cccc--ChH---HHH--hcChhhhhccc
Confidence 32 1111110 0000000 00001111111110000000 0010 000 000 01111122222
Q ss_pred HhCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCc-cCh
Q 024521 162 IQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPY-AQP 240 (266)
Q Consensus 162 l~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~-dqP 240 (266)
..|+||+||..|..|+...++++.+.|+. .+ .+ ..++++++.||-+.. +.-
T Consensus 551 ---~~P~LliHG~~D~~v~~~q~~~~~~aL~~-~g-----------------------~~-~~~~~~p~e~H~~~~~~~~ 602 (620)
T COG1506 551 ---KTPLLLIHGEEDDRVPIEQAEQLVDALKR-KG-----------------------KP-VELVVFPDEGHGFSRPENR 602 (620)
T ss_pred ---CCCEEEEeecCCccCChHHHHHHHHHHHH-cC-----------------------ce-EEEEEeCCCCcCCCCchhH
Confidence 67999999999999999999999999763 11 12 778999999999887 223
Q ss_pred HHHHHHHHHHhC
Q 024521 241 SRALHLFSSFVH 252 (266)
Q Consensus 241 ~~~~~~i~~fl~ 252 (266)
...+.-+.+|+.
T Consensus 603 ~~~~~~~~~~~~ 614 (620)
T COG1506 603 VKVLKEILDWFK 614 (620)
T ss_pred HHHHHHHHHHHH
Confidence 344444455553
No 61
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.24 E-value=7.3e-06 Score=70.98 Aligned_cols=60 Identities=22% Similarity=0.276 Sum_probs=46.4
Q ss_pred CCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHHH
Q 024521 164 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 243 (266)
Q Consensus 164 ~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~~ 243 (266)
...+||+..|..+.-++..-.....+. ..+ ..+..+++|||+|+.|+|+..
T Consensus 252 ~~~pvlfi~g~~S~fv~~~~~~~~~~~----------------------------fp~-~e~~~ld~aGHwVh~E~P~~~ 302 (315)
T KOG2382|consen 252 YTGPVLFIKGLQSKFVPDEHYPRMEKI----------------------------FPN-VEVHELDEAGHWVHLEKPEEF 302 (315)
T ss_pred cccceeEEecCCCCCcChhHHHHHHHh----------------------------ccc-hheeecccCCceeecCCHHHH
Confidence 356899999999887776544433333 123 666888999999999999999
Q ss_pred HHHHHHHhC
Q 024521 244 LHLFSSFVH 252 (266)
Q Consensus 244 ~~~i~~fl~ 252 (266)
.++|.+|+.
T Consensus 303 ~~~i~~Fl~ 311 (315)
T KOG2382|consen 303 IESISEFLE 311 (315)
T ss_pred HHHHHHHhc
Confidence 999999885
No 62
>PRK10985 putative hydrolase; Provisional
Probab=98.21 E-value=1.1e-05 Score=71.32 Aligned_cols=50 Identities=10% Similarity=0.001 Sum_probs=37.6
Q ss_pred HHhCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccC
Q 024521 161 IIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQ 239 (266)
Q Consensus 161 Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dq 239 (266)
+-+..+|+|+++|+.|.+++....+.+.+. ..+ ++++++.++||+.+.+.
T Consensus 251 l~~i~~P~lii~g~~D~~~~~~~~~~~~~~----------------------------~~~-~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 251 LNQIRKPTLIIHAKDDPFMTHEVIPKPESL----------------------------PPN-VEYQLTEHGGHVGFVGG 300 (324)
T ss_pred HhCCCCCEEEEecCCCCCCChhhChHHHHh----------------------------CCC-eEEEECCCCCceeeCCC
Confidence 333478999999999999987655543222 134 88899999999999875
No 63
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.11 E-value=2.5e-05 Score=65.58 Aligned_cols=163 Identities=16% Similarity=0.185 Sum_probs=98.3
Q ss_pred ccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCC-CCCCeEEEeeCCCCccHHHHHHHHHHhccc
Q 024521 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEF-KSRELFLTGESYAGHYIPQLADVLLDHNAH 84 (266)
Q Consensus 6 ~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~-~~~~~~i~GeSYgG~yvp~la~~i~~~~~~ 84 (266)
+.|+.=.|-- |-|.|.++..+. +.-.-.+.++++|++ .+ +..++.|+|.|+|-.-.-.+|.+-
T Consensus 88 n~nv~~~DYS-GyG~S~G~psE~---n~y~Di~avye~Lr~------~~g~~~~Iil~G~SiGt~~tv~Lasr~------ 151 (258)
T KOG1552|consen 88 NCNVVSYDYS-GYGRSSGKPSER---NLYADIKAVYEWLRN------RYGSPERIILYGQSIGTVPTVDLASRY------ 151 (258)
T ss_pred cceEEEEecc-cccccCCCcccc---cchhhHHHHHHHHHh------hcCCCceEEEEEecCCchhhhhHhhcC------
Confidence 4677778887 999999987653 445556677888886 44 467899999999985433444421
Q ss_pred CCCceeeechhhccccccCcCCCchhhhhhhcCcHHHHHHhCCCCCCCCCCCccccccccccCCCCCCChHHHHHHHHhC
Q 024521 85 SKGFKFNIKGVAATKMSVGVDVCMTLERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSDTDSNINILPVLKRIIQN 164 (266)
Q Consensus 85 ~~~~~~nl~Gi~~~~~~~~~~~c~~~~~~~yln~~~V~~aL~v~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~l~~Ll~~ 164 (266)
.+.|++. . ..|++- .| ..++.......-|+... .+.+..+
T Consensus 152 ------~~~alVL------~--------SPf~S~--~r--------------v~~~~~~~~~~~d~f~~-i~kI~~i--- 191 (258)
T KOG1552|consen 152 ------PLAAVVL------H--------SPFTSG--MR--------------VAFPDTKTTYCFDAFPN-IEKISKI--- 191 (258)
T ss_pred ------CcceEEE------e--------ccchhh--hh--------------hhccCcceEEeeccccc-cCcceec---
Confidence 2555540 0 011110 11 11111111111121111 2222222
Q ss_pred CCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHHHH
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 244 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~~~ 244 (266)
..||||++|..|-++|+.-..+..+.-+ +.....+|.||||--.. .+.+-+
T Consensus 192 ~~PVLiiHgtdDevv~~sHg~~Lye~~k----------------------------~~~epl~v~g~gH~~~~-~~~~yi 242 (258)
T KOG1552|consen 192 TCPVLIIHGTDDEVVDFSHGKALYERCK----------------------------EKVEPLWVKGAGHNDIE-LYPEYI 242 (258)
T ss_pred cCCEEEEecccCceecccccHHHHHhcc----------------------------ccCCCcEEecCCCcccc-cCHHHH
Confidence 5699999999999999998877777621 11455899999999855 555666
Q ss_pred HHHHHHhCC
Q 024521 245 HLFSSFVHG 253 (266)
Q Consensus 245 ~~i~~fl~~ 253 (266)
+.+++|+..
T Consensus 243 ~~l~~f~~~ 251 (258)
T KOG1552|consen 243 EHLRRFISS 251 (258)
T ss_pred HHHHHHHHH
Confidence 777778753
No 64
>PRK11071 esterase YqiA; Provisional
Probab=98.07 E-value=1.6e-05 Score=64.89 Aligned_cols=55 Identities=13% Similarity=0.190 Sum_probs=45.4
Q ss_pred CCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHHH
Q 024521 164 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 243 (266)
Q Consensus 164 ~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~~ 243 (266)
...+|+|.+|+.|-+||+..+.+..+. .....+.||+|.. ...+..
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~--------------------------------~~~~~~~ggdH~f--~~~~~~ 180 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAA--------------------------------CRQTVEEGGNHAF--VGFERY 180 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHh--------------------------------cceEEECCCCcch--hhHHHh
Confidence 356889999999999999988877776 4446889999998 344899
Q ss_pred HHHHHHHhC
Q 024521 244 LHLFSSFVH 252 (266)
Q Consensus 244 ~~~i~~fl~ 252 (266)
++.+.+|+.
T Consensus 181 ~~~i~~fl~ 189 (190)
T PRK11071 181 FNQIVDFLG 189 (190)
T ss_pred HHHHHHHhc
Confidence 999999974
No 65
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.06 E-value=4.4e-05 Score=62.81 Aligned_cols=61 Identities=25% Similarity=0.436 Sum_probs=43.8
Q ss_pred hCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHH
Q 024521 163 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 242 (266)
Q Consensus 163 ~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~ 242 (266)
+...|+++..|+.|.+.+....+.+.+.+. .. ..+.++.++||+.+.++|+.
T Consensus 219 ~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~---------------------------~~-~~~~~~~~~gH~~~~~~p~~ 270 (282)
T COG0596 219 RITVPTLIIHGEDDPVVPAELARRLAAALP---------------------------ND-ARLVVIPGAGHFPHLEAPEA 270 (282)
T ss_pred cCCCCeEEEecCCCCcCCHHHHHHHHhhCC---------------------------CC-ceEEEeCCCCCcchhhcHHH
Confidence 346899999999995555443233333310 02 67799999999999999998
Q ss_pred HHHHHHHHh
Q 024521 243 ALHLFSSFV 251 (266)
Q Consensus 243 ~~~~i~~fl 251 (266)
..+.+.+|+
T Consensus 271 ~~~~i~~~~ 279 (282)
T COG0596 271 FAAALLAFL 279 (282)
T ss_pred HHHHHHHHH
Confidence 888887754
No 66
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.04 E-value=4.7e-05 Score=63.47 Aligned_cols=188 Identities=15% Similarity=0.090 Sum_probs=104.2
Q ss_pred cceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHhcccCC
Q 024521 7 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 86 (266)
Q Consensus 7 an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~~~~~~ 86 (266)
.-++-|+.| |-|-=+.+ ....+..+.|..+...|+. -+..+|+-++|+||||..+=.+|+++.+.-...
T Consensus 34 iel~avqlP-GR~~r~~e---p~~~di~~Lad~la~el~~------~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p- 102 (244)
T COG3208 34 IELLAVQLP-GRGDRFGE---PLLTDIESLADELANELLP------PLLDAPFALFGHSMGAMLAFEVARRLERAGLPP- 102 (244)
T ss_pred hheeeecCC-CcccccCC---cccccHHHHHHHHHHHhcc------ccCCCCeeecccchhHHHHHHHHHHHHHcCCCc-
Confidence 357889999 77743332 2233556666666666652 366889999999999988888888775542110
Q ss_pred Cceeeechhh-ccccc-cCcCCCch-----------hhhhhhcCcHHHHHHhCCCCCCCCCCCccccccccccCCCCCCC
Q 024521 87 GFKFNIKGVA-ATKMS-VGVDVCMT-----------LERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSDTDSNIN 153 (266)
Q Consensus 87 ~~~~nl~Gi~-~~~~~-~~~~~c~~-----------~~~~~yln~~~V~~aL~v~~~~~~~~~~~~~~~v~~~~~d~~~~ 153 (266)
..+-+.|.. |.... .....-.+ .....+++++++++.+- +.. ..++..|...... .+
T Consensus 103 -~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~L-Pil--RAD~~~~e~Y~~~--~~---- 172 (244)
T COG3208 103 -RALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFL-PIL--RADFRALESYRYP--PP---- 172 (244)
T ss_pred -ceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHH-HHH--HHHHHHhcccccC--CC----
Confidence 011222221 20000 00000000 00123455555544431 100 0112222211000 00
Q ss_pred hHHHHHHHHhCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcc
Q 024521 154 ILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAH 233 (266)
Q Consensus 154 ~~~~l~~Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH 233 (266)
..-..+|.++.|+.|.+|...-...|-+.-+ +. +++.+ ...||
T Consensus 173 --------~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~---------------------------~~-f~l~~-fdGgH 215 (244)
T COG3208 173 --------APLACPIHAFGGEKDHEVSRDELGAWREHTK---------------------------GD-FTLRV-FDGGH 215 (244)
T ss_pred --------CCcCcceEEeccCcchhccHHHHHHHHHhhc---------------------------CC-ceEEE-ecCcc
Confidence 0126799999999999998877777766621 12 55444 45699
Q ss_pred cCCccChHHHHHHHHHHhC
Q 024521 234 MVPYAQPSRALHLFSSFVH 252 (266)
Q Consensus 234 ~vp~dqP~~~~~~i~~fl~ 252 (266)
|-..+|.+++...+.+.+.
T Consensus 216 Ffl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 216 FFLNQQREEVLARLEQHLA 234 (244)
T ss_pred eehhhhHHHHHHHHHHHhh
Confidence 9999999999999999885
No 67
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.99 E-value=8.6e-05 Score=63.00 Aligned_cols=61 Identities=18% Similarity=0.316 Sum_probs=47.8
Q ss_pred eEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHH
Q 024521 9 LLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLAD 76 (266)
Q Consensus 9 ~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~ 76 (266)
++-+|.- |||-|..+++.+ .+-+..++|+...++.+|..-|. ++.|+||||||..+.+.|.
T Consensus 105 ~~a~DlR-gHGeTk~~~e~d--lS~eT~~KD~~~~i~~~fge~~~----~iilVGHSmGGaIav~~a~ 165 (343)
T KOG2564|consen 105 CLALDLR-GHGETKVENEDD--LSLETMSKDFGAVIKELFGELPP----QIILVGHSMGGAIAVHTAA 165 (343)
T ss_pred EEEeecc-ccCccccCChhh--cCHHHHHHHHHHHHHHHhccCCC----ceEEEeccccchhhhhhhh
Confidence 4779997 999988877655 36677899999999998855432 6999999999976655544
No 68
>PRK11460 putative hydrolase; Provisional
Probab=97.88 E-value=9.7e-05 Score=62.21 Aligned_cols=62 Identities=18% Similarity=0.202 Sum_probs=48.0
Q ss_pred CCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHHHH
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 244 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~~~ 244 (266)
+.+|++.+|+.|.++|...++...+.++.. + .+ .++.++.++||.+..+.-+.+.
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~-g-----------------------~~-~~~~~~~~~gH~i~~~~~~~~~ 202 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISL-G-----------------------GD-VTLDIVEDLGHAIDPRLMQFAL 202 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHC-C-----------------------CC-eEEEEECCCCCCCCHHHHHHHH
Confidence 689999999999999999998888886421 1 12 7888899999999765556666
Q ss_pred HHHHHHh
Q 024521 245 HLFSSFV 251 (266)
Q Consensus 245 ~~i~~fl 251 (266)
+-+++++
T Consensus 203 ~~l~~~l 209 (232)
T PRK11460 203 DRLRYTV 209 (232)
T ss_pred HHHHHHc
Confidence 6665555
No 69
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.87 E-value=0.0002 Score=67.35 Aligned_cols=50 Identities=16% Similarity=0.315 Sum_probs=40.4
Q ss_pred CCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHH
Q 024521 164 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 242 (266)
Q Consensus 164 ~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~ 242 (266)
-.+|+|++.|..|.++|...++.+.+.+ ++ -...++.++||+++.++|..
T Consensus 414 I~vPvLvV~G~~D~IvP~~sa~~l~~~i----------------------------~~-~~~~vL~~sGHi~~ienPp~ 463 (532)
T TIGR01838 414 VKVPVYIIATREDHIAPWQSAYRGAALL----------------------------GG-PKTFVLGESGHIAGVVNPPS 463 (532)
T ss_pred CCCCEEEEeeCCCCcCCHHHHHHHHHHC----------------------------CC-CEEEEECCCCCchHhhCCCC
Confidence 3689999999999999999888776662 22 34467899999999999864
No 70
>PLN02442 S-formylglutathione hydrolase
Probab=97.83 E-value=0.00029 Score=61.11 Aligned_cols=49 Identities=10% Similarity=0.062 Sum_probs=36.7
Q ss_pred hCCCcEEEEecCCccccCcc-chHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCC
Q 024521 163 QNGIPVWVFSGDQDSVVPLL-GSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVP 236 (266)
Q Consensus 163 ~~~i~VLiy~G~~D~iv~~~-g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp 236 (266)
..+.|+++.+|+.|.+|+.. .++.+.+.++. .+ .+ .++.++.+++|..+
T Consensus 215 ~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~-~g-----------------------~~-~~~~~~pg~~H~~~ 264 (283)
T PLN02442 215 DVSATILIDQGEADKFLKEQLLPENFEEACKE-AG-----------------------AP-VTLRLQPGYDHSYF 264 (283)
T ss_pred ccCCCEEEEECCCCccccccccHHHHHHHHHH-cC-----------------------CC-eEEEEeCCCCccHH
Confidence 34789999999999999974 46677666532 11 23 88899999999765
No 71
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=97.68 E-value=4.7e-05 Score=58.41 Aligned_cols=42 Identities=33% Similarity=0.561 Sum_probs=33.0
Q ss_pred CCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCccc
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHM 234 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~ 234 (266)
.+||++.+|+.|.+++....+.+.++++ .+ -+++.|.++||+
T Consensus 104 ~~pv~~i~g~~D~~~~~~~~~~~~~~~~---------------------------~~-~~~~~i~g~~H~ 145 (145)
T PF12695_consen 104 RIPVLFIHGENDPLVPPEQVRRLYEALP---------------------------GP-KELYIIPGAGHF 145 (145)
T ss_dssp TSEEEEEEETT-SSSHHHHHHHHHHHHC---------------------------SS-EEEEEETTS-TT
T ss_pred CCcEEEEEECCCCcCCHHHHHHHHHHcC---------------------------CC-cEEEEeCCCcCc
Confidence 5699999999999999888888887742 12 677999999996
No 72
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=97.62 E-value=1.3e-05 Score=72.17 Aligned_cols=64 Identities=22% Similarity=0.302 Sum_probs=46.7
Q ss_pred cccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHH
Q 024521 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLAD 76 (266)
Q Consensus 5 ~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~ 76 (266)
+..+||-||-| |+|+|.... + +. ....++..+.+++...|++-...+.++|-|+||.|++.+|.
T Consensus 217 rGiA~LtvDmP-G~G~s~~~~---l--~~--D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~ 280 (411)
T PF06500_consen 217 RGIAMLTVDMP-GQGESPKWP---L--TQ--DSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAA 280 (411)
T ss_dssp CT-EEEEE--T-TSGGGTTT----S---S---CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHH
T ss_pred CCCEEEEEccC-CCcccccCC---C--Cc--CHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHH
Confidence 34689999999 999985321 1 11 12356677788888899998889999999999999988886
No 73
>PLN02872 triacylglycerol lipase
Probab=97.62 E-value=0.00018 Score=65.34 Aligned_cols=60 Identities=13% Similarity=0.334 Sum_probs=48.6
Q ss_pred CCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCccc---CCccChH
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHM---VPYAQPS 241 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~---vp~dqP~ 241 (266)
.+||+++.|+.|.+++....+.+.+.+.. . .++..+.++||+ ...+.|+
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~---------------------------~-~~l~~l~~~gH~dfi~~~eape 376 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELPS---------------------------K-PELLYLENYGHIDFLLSTSAKE 376 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCCC---------------------------c-cEEEEcCCCCCHHHHhCcchHH
Confidence 57999999999999998888888887421 0 234678999996 4568999
Q ss_pred HHHHHHHHHhC
Q 024521 242 RALHLFSSFVH 252 (266)
Q Consensus 242 ~~~~~i~~fl~ 252 (266)
.+++-+.+|+.
T Consensus 377 ~V~~~Il~fL~ 387 (395)
T PLN02872 377 DVYNHMIQFFR 387 (395)
T ss_pred HHHHHHHHHHH
Confidence 99999999996
No 74
>COG1647 Esterase/lipase [General function prediction only]
Probab=97.62 E-value=0.00011 Score=60.33 Aligned_cols=62 Identities=16% Similarity=0.285 Sum_probs=48.9
Q ss_pred CCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccC-hHHH
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQ-PSRA 243 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dq-P~~~ 243 (266)
..|++|..|.+|.++|..+++...+.+.. +. =...+..++||-+..|. .+..
T Consensus 181 ~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s--------------------------~~-KeL~~~e~SgHVIt~D~Erd~v 233 (243)
T COG1647 181 YSPTLVVQGRQDEMVPAESANFIYDHVES--------------------------DD-KELKWLEGSGHVITLDKERDQV 233 (243)
T ss_pred ccchhheecccCCCCCHHHHHHHHHhccC--------------------------Cc-ceeEEEccCCceeecchhHHHH
Confidence 67999999999999999999998888421 11 23377789999999985 5778
Q ss_pred HHHHHHHhCC
Q 024521 244 LHLFSSFVHG 253 (266)
Q Consensus 244 ~~~i~~fl~~ 253 (266)
.+-+-+||.+
T Consensus 234 ~e~V~~FL~~ 243 (243)
T COG1647 234 EEDVITFLEK 243 (243)
T ss_pred HHHHHHHhhC
Confidence 8888888853
No 75
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=97.46 E-value=0.00051 Score=55.76 Aligned_cols=60 Identities=13% Similarity=0.092 Sum_probs=47.2
Q ss_pred CCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHHHH
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 244 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~~~ 244 (266)
+.|+||.+|..|..|+-.-.- ||..+. .. ..+.+..+.+|..+.--|++..
T Consensus 216 kcPtli~hG~kDp~~~~~hv~-fi~~~~---------------------------~~-a~~~~~peGkHn~hLrya~eFn 266 (277)
T KOG2984|consen 216 KCPTLIMHGGKDPFCGDPHVC-FIPVLK---------------------------SL-AKVEIHPEGKHNFHLRYAKEFN 266 (277)
T ss_pred cCCeeEeeCCcCCCCCCCCcc-chhhhc---------------------------cc-ceEEEccCCCcceeeechHHHH
Confidence 789999999999999865432 333310 12 5567889999999999999999
Q ss_pred HHHHHHhCC
Q 024521 245 HLFSSFVHG 253 (266)
Q Consensus 245 ~~i~~fl~~ 253 (266)
.++.+|++.
T Consensus 267 klv~dFl~~ 275 (277)
T KOG2984|consen 267 KLVLDFLKS 275 (277)
T ss_pred HHHHHHHhc
Confidence 999999964
No 76
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.39 E-value=0.0042 Score=53.54 Aligned_cols=49 Identities=14% Similarity=0.141 Sum_probs=35.6
Q ss_pred CCcEEEEecCCccccCc-cchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCcc
Q 024521 165 GIPVWVFSGDQDSVVPL-LGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYA 238 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~-~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~d 238 (266)
..++++.+|..|..++. ...+.+.+.++. .+ .+ .++.++.|+||--..-
T Consensus 211 ~~plli~~G~~D~~v~~~~~~~~~~~~l~~-~g-----------------------~~-v~~~~~~g~~H~f~~~ 260 (275)
T TIGR02821 211 HSTILIDQGTADQFLDEQLRPDAFEQACRA-AG-----------------------QA-LTLRRQAGYDHSYYFI 260 (275)
T ss_pred CCCeeEeecCCCcccCccccHHHHHHHHHH-cC-----------------------CC-eEEEEeCCCCccchhH
Confidence 46899999999999998 566666666532 11 12 7888999999986553
No 77
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=97.22 E-value=0.00094 Score=55.44 Aligned_cols=59 Identities=24% Similarity=0.401 Sum_probs=41.5
Q ss_pred CCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHHHH
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 244 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~~~ 244 (266)
+.||++.+|+.|.++|....+...+.|+... .+ ++|..+.+.||-++ .+.+
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~------------------------~~-v~~~~~~g~gH~i~----~~~~ 205 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAG------------------------AN-VEFHEYPGGGHEIS----PEEL 205 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-------------------------G-EEEEEETT-SSS------HHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcC------------------------CC-EEEEEcCCCCCCCC----HHHH
Confidence 6899999999999999999888887764211 12 89999999999996 4556
Q ss_pred HHHHHHhC
Q 024521 245 HLFSSFVH 252 (266)
Q Consensus 245 ~~i~~fl~ 252 (266)
..+.+||.
T Consensus 206 ~~~~~~l~ 213 (216)
T PF02230_consen 206 RDLREFLE 213 (216)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66666764
No 78
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=97.19 E-value=0.0024 Score=55.00 Aligned_cols=71 Identities=15% Similarity=0.085 Sum_probs=48.1
Q ss_pred cccceEEeeCCCCcccccccCC-----CCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHH
Q 024521 5 KASNLLFVESPAGVGWSYSNTT-----SDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLL 79 (266)
Q Consensus 5 ~~an~l~iD~PvG~GfS~~~~~-----~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~ 79 (266)
....++=|... |+|..+.. +.-..+-.+..+.-+.|++++....+ -.+.+++|+|||.|+ +++.+++
T Consensus 31 ~~~~i~~ish~---Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGa----yi~levl 102 (266)
T PF10230_consen 31 PQFEILGISHA---GHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN-KPNVKLILIGHSIGA----YIALEVL 102 (266)
T ss_pred CCCeeEEecCC---CCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHH----HHHHHHH
Confidence 34555666655 55554433 22245777777788889998887664 245689999999999 6777777
Q ss_pred Hhcc
Q 024521 80 DHNA 83 (266)
Q Consensus 80 ~~~~ 83 (266)
++..
T Consensus 103 ~r~~ 106 (266)
T PF10230_consen 103 KRLP 106 (266)
T ss_pred Hhcc
Confidence 6654
No 79
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.14 E-value=0.0016 Score=47.58 Aligned_cols=65 Identities=28% Similarity=0.417 Sum_probs=55.5
Q ss_pred CCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHHHH
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 244 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~~~ 244 (266)
..+||+.+++.|.++|+.+++...+.| ++ -..+++.++||-+-...-.-+.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l----------------------------~~-s~lvt~~g~gHg~~~~~s~C~~ 84 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARL----------------------------PG-SRLVTVDGAGHGVYAGGSPCVD 84 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHC----------------------------CC-ceEEEEeccCcceecCCChHHH
Confidence 489999999999999999999998884 33 5569999999999875557889
Q ss_pred HHHHHHhCCCCCCC
Q 024521 245 HLFSSFVHGRRLPN 258 (266)
Q Consensus 245 ~~i~~fl~~~~~~~ 258 (266)
+++.+||..-.+|.
T Consensus 85 ~~v~~yl~~G~lP~ 98 (103)
T PF08386_consen 85 KAVDDYLLDGTLPA 98 (103)
T ss_pred HHHHHHHHcCCCCC
Confidence 99999998777764
No 80
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=96.96 E-value=0.0012 Score=56.84 Aligned_cols=64 Identities=14% Similarity=0.068 Sum_probs=43.1
Q ss_pred ccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHH
Q 024521 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADV 77 (266)
Q Consensus 6 ~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~ 77 (266)
..+++.+|.| |+|.|.+.... .+.....+|+..++. ++... ...+++|+|+|+||..+..+|..
T Consensus 56 Gy~Vl~~Dl~-G~G~S~g~~~~---~~~~~~~~Dv~~ai~-~L~~~---~~~~v~LvG~SmGG~vAl~~A~~ 119 (266)
T TIGR03101 56 GFGVLQIDLY-GCGDSAGDFAA---ARWDVWKEDVAAAYR-WLIEQ---GHPPVTLWGLRLGALLALDAANP 119 (266)
T ss_pred CCEEEEECCC-CCCCCCCcccc---CCHHHHHHHHHHHHH-HHHhc---CCCCEEEEEECHHHHHHHHHHHh
Confidence 4799999999 99998654321 133444566554433 33333 24689999999999877777654
No 81
>COG0400 Predicted esterase [General function prediction only]
Probab=96.94 E-value=0.0087 Score=49.45 Aligned_cols=127 Identities=20% Similarity=0.220 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHhcccCCCceeeechhhccccccCcCCCchhhhh
Q 024521 34 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAATKMSVGVDVCMTLERF 113 (266)
Q Consensus 34 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~~~~~~~~~~nl~Gi~~~~~~~~~~~c~~~~~~ 113 (266)
...++.+.+||....+.+ .+..+++++.|.|-|+.++.++...- +-.++|++.
T Consensus 77 ~~~~~~~~~~l~~~~~~~-gi~~~~ii~~GfSqGA~ial~~~l~~----------~~~~~~ail---------------- 129 (207)
T COG0400 77 DLETEKLAEFLEELAEEY-GIDSSRIILIGFSQGANIALSLGLTL----------PGLFAGAIL---------------- 129 (207)
T ss_pred HHHHHHHHHHHHHHHHHh-CCChhheEEEecChHHHHHHHHHHhC----------chhhccchh----------------
Confidence 334556677887777766 35567899999999997666555532 123555530
Q ss_pred hhcCcHHHHHHhCCCCCCCCCCCccccccccccCCCCCCChHHHHHHHHhCCCcEEEEecCCccccCccchHHHHHHHHh
Q 024521 114 FYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSDTDSNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELAR 193 (266)
Q Consensus 114 ~yln~~~V~~aL~v~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~l~~Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~ 193 (266)
.... .|.+. .. .-...+.||++.+|..|.+||..-+++..+.++.
T Consensus 130 -------------~~g~-~~~~~--------------------~~-~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~ 174 (207)
T COG0400 130 -------------FSGM-LPLEP--------------------EL-LPDLAGTPILLSHGTEDPVVPLALAEALAEYLTA 174 (207)
T ss_pred -------------cCCc-CCCCC--------------------cc-ccccCCCeEEEeccCcCCccCHHHHHHHHHHHHH
Confidence 0000 00000 00 0011379999999999999999999988888653
Q ss_pred cccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHHHHHHHHHHhC
Q 024521 194 DLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRALHLFSSFVH 252 (266)
Q Consensus 194 ~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~~~~~i~~fl~ 252 (266)
.+. + ..+.++. .||.++.+ .++.+++|+.
T Consensus 175 -~g~-----------------------~-v~~~~~~-~GH~i~~e----~~~~~~~wl~ 203 (207)
T COG0400 175 -SGA-----------------------D-VEVRWHE-GGHEIPPE----ELEAARSWLA 203 (207)
T ss_pred -cCC-----------------------C-EEEEEec-CCCcCCHH----HHHHHHHHHH
Confidence 111 2 6667777 99999654 4444444664
No 82
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=96.80 E-value=0.014 Score=57.58 Aligned_cols=30 Identities=20% Similarity=0.022 Sum_probs=26.0
Q ss_pred hCCCcEEEEecCCccccCccchHHHHHHHH
Q 024521 163 QNGIPVWVFSGDQDSVVPLLGSRTLIRELA 192 (266)
Q Consensus 163 ~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~ 192 (266)
+.++|||+++|-.|..++..++.++.+.+.
T Consensus 453 kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~ 482 (767)
T PRK05371 453 KIKASVLVVHGLNDWNVKPKQVYQWWDALP 482 (767)
T ss_pred CCCCCEEEEeeCCCCCCChHHHHHHHHHHH
Confidence 447999999999999999988888888864
No 83
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=96.78 E-value=0.049 Score=47.49 Aligned_cols=68 Identities=22% Similarity=0.423 Sum_probs=52.0
Q ss_pred CCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeC-CeeEEEEEcCCcccCCc--cChH
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYG-NLLTFVTVRGAAHMVPY--AQPS 241 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~-~~ltf~~V~~AGH~vp~--dqP~ 241 (266)
..||+||+|..|.++|+..+...++++-.. | .+.+|..+.+++|+... .. .
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~-------------------------G~a~V~~~~~~~~~H~~~~~~~~-~ 272 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAA-------------------------GGADVEYVRYPGGGHLGAAFASA-P 272 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHc-------------------------CCCCEEEEecCCCChhhhhhcCc-H
Confidence 479999999999999999999998885321 2 22999999999999653 34 4
Q ss_pred HHHHHHHHHhCCCCCCC
Q 024521 242 RALHLFSSFVHGRRLPN 258 (266)
Q Consensus 242 ~~~~~i~~fl~~~~~~~ 258 (266)
.++.-+.+=++|++.++
T Consensus 273 ~a~~Wl~~rf~G~~~~~ 289 (290)
T PF03583_consen 273 DALAWLDDRFAGKPATS 289 (290)
T ss_pred HHHHHHHHHHCCCCCCC
Confidence 55566666677777654
No 84
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=96.74 E-value=0.039 Score=45.52 Aligned_cols=28 Identities=18% Similarity=0.120 Sum_probs=24.7
Q ss_pred cEEEEecCCccccCccchHHHHHHHHhc
Q 024521 167 PVWVFSGDQDSVVPLLGSRTLIRELARD 194 (266)
Q Consensus 167 ~VLiy~G~~D~iv~~~g~~~~i~~l~~~ 194 (266)
+++|.+|+.|.+||...++...+.++.-
T Consensus 170 ~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 170 IMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred eEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 4679999999999999999999998743
No 85
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=96.63 E-value=0.005 Score=56.58 Aligned_cols=67 Identities=16% Similarity=0.179 Sum_probs=45.2
Q ss_pred ccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHH
Q 024521 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADV 77 (266)
Q Consensus 6 ~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~ 77 (266)
.+|||-+|-| |.|-|.-... ..+...+++++.++++...+.. .+.-.+++|+|+|+||+.+-.+|..
T Consensus 73 d~nVI~VDw~-g~g~s~y~~a---~~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~ 139 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQHYPTS---AAYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSL 139 (442)
T ss_pred CCEEEEEECC-CcCCCCCccc---cccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHh
Confidence 4799999999 6664422111 1233566777777776544333 2555689999999999988887764
No 86
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=96.11 E-value=0.0077 Score=50.03 Aligned_cols=35 Identities=20% Similarity=0.381 Sum_probs=28.1
Q ss_pred HHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHH
Q 024521 44 MMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVL 78 (266)
Q Consensus 44 l~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i 78 (266)
-.+|+..+|+.....+-|+|-|.||-++..+|...
T Consensus 9 Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~ 43 (213)
T PF08840_consen 9 AIDWLKSHPEVDPDKIGIIGISKGAELALLLASRF 43 (213)
T ss_dssp HHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHS
T ss_pred HHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcC
Confidence 44677889999989999999999998888888765
No 87
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.09 E-value=0.006 Score=52.75 Aligned_cols=70 Identities=14% Similarity=0.162 Sum_probs=43.8
Q ss_pred cccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHH
Q 024521 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLL 79 (266)
Q Consensus 5 ~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~ 79 (266)
...|||.||-+.+....|... ..+...+++++..+|+...+.. .+...+++|+|+|+||+.+-.+|....
T Consensus 65 ~~~nVi~vD~~~~~~~~y~~a----~~~~~~v~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~ 134 (275)
T cd00707 65 GDYNVIVVDWGRGANPNYPQA----VNNTRVVGAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLN 134 (275)
T ss_pred CCCEEEEEECccccccChHHH----HHhHHHHHHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhc
Confidence 358999999983311111100 1133445666666666655443 234468999999999998888887653
No 88
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=95.84 E-value=0.052 Score=43.93 Aligned_cols=62 Identities=23% Similarity=0.253 Sum_probs=40.1
Q ss_pred ceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHH
Q 024521 8 NLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADV 77 (266)
Q Consensus 8 n~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~ 77 (266)
..|-.|-= |+|-|-++-+++. .+.+-|...+.+++ ..+|+.. .+.++|.|+|+..+..+|.+
T Consensus 62 atlRfNfR-gVG~S~G~fD~Gi--GE~~Da~aaldW~~---~~hp~s~--~~~l~GfSFGa~Ia~~la~r 123 (210)
T COG2945 62 ATLRFNFR-GVGRSQGEFDNGI--GELEDAAAALDWLQ---ARHPDSA--SCWLAGFSFGAYIAMQLAMR 123 (210)
T ss_pred eEEeeccc-ccccccCcccCCc--chHHHHHHHHHHHH---hhCCCch--hhhhcccchHHHHHHHHHHh
Confidence 34555554 9999998877664 44454555555655 3577653 37999999999555555543
No 89
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=95.68 E-value=0.013 Score=48.53 Aligned_cols=63 Identities=19% Similarity=0.164 Sum_probs=45.6
Q ss_pred cceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHh
Q 024521 7 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 81 (266)
Q Consensus 7 an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~ 81 (266)
.+|..|+.| |.+ .. .....+..+.|+...+.++. ..| ..|++|+|+|+||..+-.+|+++.++
T Consensus 28 ~~v~~i~~~-~~~--~~---~~~~~si~~la~~y~~~I~~---~~~---~gp~~L~G~S~Gg~lA~E~A~~Le~~ 90 (229)
T PF00975_consen 28 IGVYGIEYP-GRG--DD---EPPPDSIEELASRYAEAIRA---RQP---EGPYVLAGWSFGGILAFEMARQLEEA 90 (229)
T ss_dssp EEEEEECST-TSC--TT---SHEESSHHHHHHHHHHHHHH---HTS---SSSEEEEEETHHHHHHHHHHHHHHHT
T ss_pred EEEEEEecC-CCC--CC---CCCCCCHHHHHHHHHHHhhh---hCC---CCCeeehccCccHHHHHHHHHHHHHh
Confidence 678999999 655 11 11224677888887777764 222 23999999999999999999888766
No 90
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=95.57 E-value=0.047 Score=48.10 Aligned_cols=60 Identities=22% Similarity=0.306 Sum_probs=39.6
Q ss_pred cccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHh-CCCCCCCCeEEEeeCCCCccHH
Q 024521 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEK-FPEFKSRELFLTGESYAGHYIP 72 (266)
Q Consensus 5 ~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~-~p~~~~~~~~i~GeSYgG~yvp 72 (266)
..+|||..--| |+|+|.+.. +....+.+- +.+-+++.. .-..+.+.+.+.|+|.||....
T Consensus 170 ~~aNvl~fNYp-GVg~S~G~~------s~~dLv~~~-~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa 230 (365)
T PF05677_consen 170 LGANVLVFNYP-GVGSSTGPP------SRKDLVKDY-QACVRYLRDEEQGPKAKNIILYGHSLGGGVQA 230 (365)
T ss_pred cCCcEEEECCC-ccccCCCCC------CHHHHHHHH-HHHHHHHHhcccCCChheEEEeeccccHHHHH
Confidence 36899999999 999998754 223333332 333334433 3234668899999999995433
No 91
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=95.53 E-value=0.35 Score=39.29 Aligned_cols=24 Identities=33% Similarity=0.538 Sum_probs=19.8
Q ss_pred CCCCeEEEeeCCCCccHHHHHHHH
Q 024521 55 KSRELFLTGESYAGHYIPQLADVL 78 (266)
Q Consensus 55 ~~~~~~i~GeSYgG~yvp~la~~i 78 (266)
....+.|+|-|+||.|+-.+|.+.
T Consensus 57 ~~~~~~liGSSlGG~~A~~La~~~ 80 (187)
T PF05728_consen 57 KPENVVLIGSSLGGFYATYLAERY 80 (187)
T ss_pred CCCCeEEEEEChHHHHHHHHHHHh
Confidence 344599999999999999988754
No 92
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=95.12 E-value=0.05 Score=53.45 Aligned_cols=71 Identities=11% Similarity=0.097 Sum_probs=46.2
Q ss_pred ccceEEeeCCCCccccccc---------CCCC--C-C--------CCcHHHHHHHHHHHHHHH---------HhCCCCCC
Q 024521 6 ASNLLFVESPAGVGWSYSN---------TTSD--Y-N--------CGDASTARDMHVFMMNWY---------EKFPEFKS 56 (266)
Q Consensus 6 ~an~l~iD~PvG~GfS~~~---------~~~~--~-~--------~~~~~~a~~~~~fl~~f~---------~~~p~~~~ 56 (266)
.+.++-+|.| |+|-|... ..+. | . .+-.+.+.|++......- ..+..+..
T Consensus 476 Gy~VIaiDlp-GHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~ 554 (792)
T TIGR03502 476 GVATIAIDHP-LHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDG 554 (792)
T ss_pred CcEEEEeCCC-CCCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCC
Confidence 4679999999 99998332 1111 1 1 144677777765544322 12334567
Q ss_pred CCeEEEeeCCCCccHHHHHHH
Q 024521 57 RELFLTGESYAGHYIPQLADV 77 (266)
Q Consensus 57 ~~~~i~GeSYgG~yvp~la~~ 77 (266)
.+++++|||+||..+..++..
T Consensus 555 ~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 555 SKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred CcEEEEecCHHHHHHHHHHHh
Confidence 899999999999887777753
No 93
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=94.79 E-value=0.039 Score=52.50 Aligned_cols=65 Identities=20% Similarity=0.172 Sum_probs=44.8
Q ss_pred cccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHH
Q 024521 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLAD 76 (266)
Q Consensus 5 ~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~ 76 (266)
+.+.++.+|.+ |+|.|.+.... .+ ...++|+..++. |+...|.- ..++.++|+||||..+-.+|.
T Consensus 52 ~Gy~vv~~D~R-G~g~S~g~~~~---~~-~~~~~D~~~~i~-~l~~q~~~-~~~v~~~G~S~GG~~a~~~a~ 116 (550)
T TIGR00976 52 QGYAVVIQDTR-GRGASEGEFDL---LG-SDEAADGYDLVD-WIAKQPWC-DGNVGMLGVSYLAVTQLLAAV 116 (550)
T ss_pred CCcEEEEEecc-ccccCCCceEe---cC-cccchHHHHHHH-HHHhCCCC-CCcEEEEEeChHHHHHHHHhc
Confidence 46789999999 99999875321 11 345566666555 55555533 458999999999976555554
No 94
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=94.67 E-value=0.099 Score=43.17 Aligned_cols=49 Identities=20% Similarity=0.276 Sum_probs=32.0
Q ss_pred hCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCC
Q 024521 163 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVP 236 (266)
Q Consensus 163 ~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp 236 (266)
+.+.|+++..|..|..++....+.+.+.|+.. + .. +++.+..|++|--.
T Consensus 143 ~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~-~-----------------------~~-~~~~~y~ga~HgF~ 191 (218)
T PF01738_consen 143 KIKAPVLILFGENDPFFPPEEVEALEEALKAA-G-----------------------VD-VEVHVYPGAGHGFA 191 (218)
T ss_dssp G--S-EEEEEETT-TTS-HHHHHHHHHHHHCT-T-----------------------TT-EEEEEETT--TTTT
T ss_pred ccCCCEeecCccCCCCCChHHHHHHHHHHHhc-C-----------------------Cc-EEEEECCCCccccc
Confidence 33789999999999999999888888886421 0 12 88899999999643
No 95
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=94.65 E-value=0.087 Score=43.20 Aligned_cols=44 Identities=14% Similarity=-0.036 Sum_probs=33.9
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHH
Q 024521 32 GDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADV 77 (266)
Q Consensus 32 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~ 77 (266)
+.+++..++.++++--++.+|.- +.+-+.|+|-|.|.+.....+
T Consensus 113 tL~qt~~~~~~gv~filk~~~n~--k~l~~gGHSaGAHLa~qav~R 156 (270)
T KOG4627|consen 113 TLEQTMTQFTHGVNFILKYTENT--KVLTFGGHSAGAHLAAQAVMR 156 (270)
T ss_pred cHHHHHHHHHHHHHHHHHhcccc--eeEEEcccchHHHHHHHHHHH
Confidence 66788889999988777778754 349999999999866655554
No 96
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=94.17 E-value=0.087 Score=41.02 Aligned_cols=44 Identities=18% Similarity=0.213 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHh
Q 024521 35 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 81 (266)
Q Consensus 35 ~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~ 81 (266)
.+...+...+++....+|. .+++|+|+|+||..+-.+|..+.++
T Consensus 9 ~~~~~i~~~~~~~~~~~p~---~~i~v~GHSlGg~lA~l~a~~~~~~ 52 (153)
T cd00741 9 SLANLVLPLLKSALAQYPD---YKIHVTGHSLGGALAGLAGLDLRGR 52 (153)
T ss_pred HHHHHHHHHHHHHHHHCCC---CeEEEEEcCHHHHHHHHHHHHHHhc
Confidence 3344555555565555564 4899999999999888888887654
No 97
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=93.91 E-value=0.12 Score=47.82 Aligned_cols=55 Identities=11% Similarity=0.188 Sum_probs=35.3
Q ss_pred eCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHH
Q 024521 13 ESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLAD 76 (266)
Q Consensus 13 D~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~ 76 (266)
|.+ |.||+.... ....+..+++-+.+...++..+ .+++.|+||||||.++-.++.
T Consensus 127 dL~-g~gYDwR~~-----~~~~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 127 TLF-GFGYDFRQS-----NRLPETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred Ccc-cCCCCcccc-----ccHHHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHH
Confidence 455 666554321 1124455666777777766543 579999999999976666554
No 98
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=93.87 E-value=0.19 Score=43.45 Aligned_cols=34 Identities=24% Similarity=0.373 Sum_probs=28.6
Q ss_pred eEEEEEcCCcccCCccChHHHHHHHHHHhCCCCC
Q 024521 223 LTFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 256 (266)
Q Consensus 223 ltf~~V~~AGH~vp~dqP~~~~~~i~~fl~~~~~ 256 (266)
-|++.|.++|=||..|||....+.++=|+.|..+
T Consensus 248 ttllkv~dcGglV~eEqP~klaea~~lFlQG~G~ 281 (283)
T PF03096_consen 248 TTLLKVADCGGLVLEEQPGKLAEAFKLFLQGMGY 281 (283)
T ss_dssp EEEEEETT-TT-HHHH-HHHHHHHHHHHHHHTTB
T ss_pred ceEEEecccCCcccccCcHHHHHHHHHHHccCCc
Confidence 8889999999999999999999999999988654
No 99
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.75 E-value=0.32 Score=45.44 Aligned_cols=78 Identities=17% Similarity=0.201 Sum_probs=58.5
Q ss_pred HHHHHhCCCcEEEEecCCccccCccchHHHHHHHHhccccc--ccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccC
Q 024521 158 LKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFE--VTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMV 235 (266)
Q Consensus 158 l~~Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~--~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~v 235 (266)
|....+.|=|+|+|||..|.+++..++..+-+++...++-. ... +- +.|+.|+|.||--
T Consensus 346 LsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~------------------dF-~RlF~vPGm~HC~ 406 (474)
T PF07519_consen 346 LSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVD------------------DF-YRLFMVPGMGHCG 406 (474)
T ss_pred HHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhccccccccc------------------ce-eEEEecCCCcccC
Confidence 44455678899999999999999999999999876433211 111 12 7889999999985
Q ss_pred Ccc--ChHHHHHHHHHHhCCC
Q 024521 236 PYA--QPSRALHLFSSFVHGR 254 (266)
Q Consensus 236 p~d--qP~~~~~~i~~fl~~~ 254 (266)
.-. .|-.++..|.+|+.+.
T Consensus 407 gG~g~~~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 407 GGPGPDPFDALTALVDWVENG 427 (474)
T ss_pred CCCCCCCCCHHHHHHHHHhCC
Confidence 443 6678888899999753
No 100
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=93.68 E-value=0.36 Score=47.74 Aligned_cols=186 Identities=17% Similarity=0.124 Sum_probs=100.0
Q ss_pred cceEEeeCCCCcccccccCCCCCCCCc-HHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHhcccC
Q 024521 7 SNLLFVESPAGVGWSYSNTTSDYNCGD-ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS 85 (266)
Q Consensus 7 an~l~iD~PvG~GfS~~~~~~~~~~~~-~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~~~~~ 85 (266)
+-++.||- .|+|+.-.+-.......- ....+|....++.+.+.+ -.-...+.|+|-|||| +++..++.+...
T Consensus 559 ~~v~~vd~-RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGG----y~t~~~l~~~~~- 631 (755)
T KOG2100|consen 559 FAVLQVDG-RGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGG----YLTLKLLESDPG- 631 (755)
T ss_pred eEEEEEcC-CCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcc-cccHHHeEEeccChHH----HHHHHHhhhCcC-
Confidence 45778884 488864322111111111 122456666666666655 3444569999999999 677776655421
Q ss_pred CCceeee-chhhccccccCcCCC--chhhhhhhcCcHHHHHHhCCCCCCCCCCCccccccccccCCCCCCChHHHHHHHH
Q 024521 86 KGFKFNI-KGVAATKMSVGVDVC--MTLERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSDTDSNINILPVLKRII 162 (266)
Q Consensus 86 ~~~~~nl-~Gi~~~~~~~~~~~c--~~~~~~~yln~~~V~~aL~v~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~l~~Ll 162 (266)
.-+.. ..++| ..+.- .....+.| ++.+.. +. +. +.. .+....+..+
T Consensus 632 --~~fkcgvavaP-----Vtd~~~yds~~tery---------mg~p~~-----~~-~~------y~e--~~~~~~~~~~- 680 (755)
T KOG2100|consen 632 --DVFKCGVAVAP-----VTDWLYYDSTYTERY---------MGLPSE-----ND-KG------YEE--SSVSSPANNI- 680 (755)
T ss_pred --ceEEEEEEecc-----eeeeeeecccccHhh---------cCCCcc-----cc-ch------hhh--ccccchhhhh-
Confidence 11222 11111 00100 00111222 333221 00 00 000 0112222333
Q ss_pred hCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccCh-H
Q 024521 163 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP-S 241 (266)
Q Consensus 163 ~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP-~ 241 (266)
.+.+.|+.+|..|.-|.+..+..++++|... +-.+..++..+..|-+-.-.+ .
T Consensus 681 -~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~-------------------------gv~~~~~vypde~H~is~~~~~~ 734 (755)
T KOG2100|consen 681 -KTPKLLLIHGTEDDNVHFQQSAILIKALQNA-------------------------GVPFRLLVYPDENHGISYVEVIS 734 (755)
T ss_pred -ccCCEEEEEcCCcCCcCHHHHHHHHHHHHHC-------------------------CCceEEEEeCCCCcccccccchH
Confidence 2345799999999999999999999997532 111666899999999866443 5
Q ss_pred HHHHHHHHHhCCCCCC
Q 024521 242 RALHLFSSFVHGRRLP 257 (266)
Q Consensus 242 ~~~~~i~~fl~~~~~~ 257 (266)
..+..+.+|+. .-+.
T Consensus 735 ~~~~~~~~~~~-~~~~ 749 (755)
T KOG2100|consen 735 HLYEKLDRFLR-DCFG 749 (755)
T ss_pred HHHHHHHHHHH-HHcC
Confidence 66777777886 5443
No 101
>PLN02454 triacylglycerol lipase
Probab=93.46 E-value=0.13 Score=46.66 Aligned_cols=47 Identities=17% Similarity=0.222 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHh
Q 024521 34 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 81 (266)
Q Consensus 34 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~ 81 (266)
..+.+++...++...+.+|+.+. .++++|||+||..+-..|..|...
T Consensus 206 ~S~r~qvl~~V~~l~~~Yp~~~~-sI~vTGHSLGGALAtLaA~di~~~ 252 (414)
T PLN02454 206 LSARSQLLAKIKELLERYKDEKL-SIVLTGHSLGASLATLAAFDIVEN 252 (414)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCc-eEEEEecCHHHHHHHHHHHHHHHh
Confidence 35678899999999999987643 599999999998887777777654
No 102
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=93.31 E-value=0.16 Score=45.33 Aligned_cols=63 Identities=14% Similarity=0.241 Sum_probs=47.3
Q ss_pred hCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccCh--
Q 024521 163 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP-- 240 (266)
Q Consensus 163 ~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP-- 240 (266)
+...||++++|+.|.++|...++.+.+.+.. .. .++.++ .+||+.+.+.|
T Consensus 284 ~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~--------------------------~~-~~~~~~-~~gH~~~~~~~~~ 335 (350)
T TIGR01836 284 NIKMPILNIYAERDHLVPPDASKALNDLVSS--------------------------ED-YTELSF-PGGHIGIYVSGKA 335 (350)
T ss_pred hCCCCeEEEecCCCCcCCHHHHHHHHHHcCC--------------------------CC-eEEEEc-CCCCEEEEECchh
Confidence 3478999999999999999888877777321 12 444554 58999988865
Q ss_pred -HHHHHHHHHHhCC
Q 024521 241 -SRALHLFSSFVHG 253 (266)
Q Consensus 241 -~~~~~~i~~fl~~ 253 (266)
+.++.-+.+||..
T Consensus 336 ~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 336 QKEVPPAIGKWLQA 349 (350)
T ss_pred HhhhhHHHHHHHHh
Confidence 6777888888853
No 103
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=93.20 E-value=0.12 Score=39.36 Aligned_cols=44 Identities=23% Similarity=0.311 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHhc
Q 024521 36 TARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHN 82 (266)
Q Consensus 36 ~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~~ 82 (266)
....+...|++..+.+| ...+.|+|||.||..+..+|..+.++.
T Consensus 46 ~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~ 89 (140)
T PF01764_consen 46 LYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHG 89 (140)
T ss_dssp HHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcc
Confidence 34456667777667777 458999999999999888888887754
No 104
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=93.06 E-value=2.1 Score=38.55 Aligned_cols=151 Identities=16% Similarity=0.183 Sum_probs=90.1
Q ss_pred HHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHhcccCCCceeeechhhccc---------cc---cCc----
Q 024521 41 HVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAATK---------MS---VGV---- 104 (266)
Q Consensus 41 ~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~~~~~~~~~~nl~Gi~~~~---------~~---~~~---- 104 (266)
...+++|.+....+.-..|.++|.|==| +...++... + -++++|+|-- +. +.+
T Consensus 156 MD~vq~~~~~~~~~~i~~FvV~GaSKRG-WTtWltaa~-D---------~RV~aivP~Vid~LN~~~~l~h~y~~yG~~w 224 (367)
T PF10142_consen 156 MDAVQEFLKKKFGVNIEKFVVTGASKRG-WTTWLTAAV-D---------PRVKAIVPIVIDVLNMKANLEHQYRSYGGNW 224 (367)
T ss_pred HHHHHHHHHhhcCCCccEEEEeCCchHh-HHHHHhhcc-C---------cceeEEeeEEEccCCcHHHHHHHHHHhCCCC
Confidence 3456777766656667789999988655 333333321 1 2566666421 10 011
Q ss_pred ----CCCchhhhhhhcCcHHHHHHhCCCCCCCCCCCccccccccccCCCCCCChHHHHHHHHhCCCcEEEEecCCccccC
Q 024521 105 ----DVCMTLERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSDTDSNINILPVLKRIIQNGIPVWVFSGDQDSVVP 180 (266)
Q Consensus 105 ----~~c~~~~~~~yln~~~V~~aL~v~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~l~~Ll~~~i~VLiy~G~~D~iv~ 180 (266)
..+....+..++++|..++++.+- |-..+++.| .+|-+|++|-.|--..
T Consensus 225 s~a~~dY~~~gi~~~l~tp~f~~L~~iv------------------------DP~~Y~~rL---~~PK~ii~atgDeFf~ 277 (367)
T PF10142_consen 225 SFAFQDYYNEGITQQLDTPEFDKLMQIV------------------------DPYSYRDRL---TMPKYIINATGDEFFV 277 (367)
T ss_pred ccchhhhhHhCchhhcCCHHHHHHHHhc------------------------CHHHHHHhc---CccEEEEecCCCceec
Confidence 111122334556666666665332 223344445 7999999999998888
Q ss_pred ccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCc-cChHHHHHHHHHHhCCCCCC
Q 024521 181 LLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPY-AQPSRALHLFSSFVHGRRLP 257 (266)
Q Consensus 181 ~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~-dqP~~~~~~i~~fl~~~~~~ 257 (266)
...+..+.+.|.+ . =.+..|+|+||..-. +--+.....+++.+.|+++|
T Consensus 278 pD~~~~y~d~L~G---------------------------~-K~lr~vPN~~H~~~~~~~~~~l~~f~~~~~~~~~lP 327 (367)
T PF10142_consen 278 PDSSNFYYDKLPG---------------------------E-KYLRYVPNAGHSLIGSDVVQSLRAFYNRIQNGRPLP 327 (367)
T ss_pred cCchHHHHhhCCC---------------------------C-eeEEeCCCCCcccchHHHHHHHHHHHHHHHcCCCCC
Confidence 8888888888643 1 233778999998655 22344455566667788887
No 105
>PLN02571 triacylglycerol lipase
Probab=92.96 E-value=0.19 Score=45.76 Aligned_cols=46 Identities=13% Similarity=0.072 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHH
Q 024521 34 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (266)
Q Consensus 34 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~ 80 (266)
..+.++++..++.+.+.+|.. ..+++++|||+||..+-..|..|..
T Consensus 204 ~Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~ 249 (413)
T PLN02571 204 TSARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVA 249 (413)
T ss_pred hhHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHH
Confidence 355678899999999888865 3479999999999888777777754
No 106
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=92.71 E-value=0.39 Score=40.08 Aligned_cols=28 Identities=29% Similarity=0.461 Sum_probs=24.8
Q ss_pred CCcEEEEecCCccccCccchHHHHHHHH
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIRELA 192 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l~ 192 (266)
++|++|++|+.|.+|+....++.+++..
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~~ 196 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQWL 196 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHHH
Confidence 6799999999999999999988888754
No 107
>PRK10115 protease 2; Provisional
Probab=92.65 E-value=1.5 Score=43.11 Aligned_cols=28 Identities=25% Similarity=0.340 Sum_probs=25.1
Q ss_pred CCc-EEEEecCCccccCccchHHHHHHHH
Q 024521 165 GIP-VWVFSGDQDSVVPLLGSRTLIRELA 192 (266)
Q Consensus 165 ~i~-VLiy~G~~D~iv~~~g~~~~i~~l~ 192 (266)
.+| +||.+|..|..|+...+++|..+|+
T Consensus 605 ~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr 633 (686)
T PRK10115 605 AYPHLLVTTGLHDSQVQYWEPAKWVAKLR 633 (686)
T ss_pred CCCceeEEecCCCCCcCchHHHHHHHHHH
Confidence 578 6678999999999999999999975
No 108
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=92.52 E-value=0.49 Score=37.87 Aligned_cols=65 Identities=15% Similarity=0.139 Sum_probs=42.1
Q ss_pred cccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHh
Q 024521 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 81 (266)
Q Consensus 5 ~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~ 81 (266)
...+++.+|.| |.|.+... ..+....+......+.. .. ...+++++|+|+||..+-.+|..+..+
T Consensus 24 ~~~~v~~~~~~-g~~~~~~~-----~~~~~~~~~~~~~~l~~---~~---~~~~~~l~g~s~Gg~~a~~~a~~l~~~ 88 (212)
T smart00824 24 GRRDVSALPLP-GFGPGEPL-----PASADALVEAQAEAVLR---AA---GGRPFVLVGHSSGGLLAHAVAARLEAR 88 (212)
T ss_pred CCccEEEecCC-CCCCCCCC-----CCCHHHHHHHHHHHHHH---hc---CCCCeEEEEECHHHHHHHHHHHHHHhC
Confidence 44688999998 77654321 12334445554444442 22 256899999999998888888877543
No 109
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=92.37 E-value=3.1 Score=34.63 Aligned_cols=179 Identities=19% Similarity=0.202 Sum_probs=96.1
Q ss_pred ceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHhcccCCC
Q 024521 8 NLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKG 87 (266)
Q Consensus 8 n~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~~~~~~~ 87 (266)
..+-+|=- |-|-|.++= +.-+-...|+|+...+|-|-. .+..--.|.|+|=||-.+--.|.++.+- .
T Consensus 64 s~fRfDF~-GnGeS~gsf---~~Gn~~~eadDL~sV~q~~s~----~nr~v~vi~gHSkGg~Vvl~ya~K~~d~-----~ 130 (269)
T KOG4667|consen 64 SAFRFDFS-GNGESEGSF---YYGNYNTEADDLHSVIQYFSN----SNRVVPVILGHSKGGDVVLLYASKYHDI-----R 130 (269)
T ss_pred eEEEEEec-CCCCcCCcc---ccCcccchHHHHHHHHHHhcc----CceEEEEEEeecCccHHHHHHHHhhcCc-----h
Confidence 45677866 888886642 222334456899888886443 2233356889999999888888887651 1
Q ss_pred ceeeechhhccccccCcC-CCchhhhhhhcCcHHHHHHhCCCCCC--CCCCCccccccccccCCCC-CCChHHHHHHHHh
Q 024521 88 FKFNIKGVAATKMSVGVD-VCMTLERFFYLNLPEVQKALHANRTN--LPYGWSMCSGVLNYSDTDS-NINILPVLKRIIQ 163 (266)
Q Consensus 88 ~~~nl~Gi~~~~~~~~~~-~c~~~~~~~yln~~~V~~aL~v~~~~--~~~~~~~~~~~v~~~~~d~-~~~~~~~l~~Ll~ 163 (266)
.-+|+.|=- .....+. .|... |+.+-.=+-.+.+++.+ .+..|.. ....|. ..+..+.-.. ++
T Consensus 131 ~viNcsGRy--dl~~~I~eRlg~~----~l~~ike~Gfid~~~rkG~y~~rvt~------eSlmdrLntd~h~aclk-Id 197 (269)
T KOG4667|consen 131 NVINCSGRY--DLKNGINERLGED----YLERIKEQGFIDVGPRKGKYGYRVTE------ESLMDRLNTDIHEACLK-ID 197 (269)
T ss_pred heEEccccc--chhcchhhhhccc----HHHHHHhCCceecCcccCCcCceecH------HHHHHHHhchhhhhhcC-cC
Confidence 135555431 0000110 11111 11111111112222110 0111111 111110 0111111112 24
Q ss_pred CCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChH
Q 024521 164 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPS 241 (266)
Q Consensus 164 ~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~ 241 (266)
..-|||-.+|-.|.+||...+..+++.|+ | =.+.+|.||-|---.+|-+
T Consensus 198 ~~C~VLTvhGs~D~IVPve~AkefAk~i~----------------------------n-H~L~iIEgADHnyt~~q~~ 246 (269)
T KOG4667|consen 198 KQCRVLTVHGSEDEIVPVEDAKEFAKIIP----------------------------N-HKLEIIEGADHNYTGHQSQ 246 (269)
T ss_pred ccCceEEEeccCCceeechhHHHHHHhcc----------------------------C-CceEEecCCCcCccchhhh
Confidence 56799999999999999999999999853 2 3347788888886666543
No 110
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=92.21 E-value=1.2 Score=38.16 Aligned_cols=65 Identities=32% Similarity=0.391 Sum_probs=39.1
Q ss_pred CCCcEEEEecC------CccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcC--CcccC
Q 024521 164 NGIPVWVFSGD------QDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRG--AAHMV 235 (266)
Q Consensus 164 ~~i~VLiy~G~------~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~--AGH~v 235 (266)
.++.||-+.|+ .|-+||...++.. +.| ++-. ... .+..+|.| |.|.-
T Consensus 183 ~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl-~~L---~~~~--------------------~~~-Y~e~~v~G~~a~HS~ 237 (255)
T PF06028_consen 183 KNIQVLNIYGDLEDGSNSDGIVPNASSLSL-RYL---LKNR--------------------AKS-YQEKTVTGKDAQHSQ 237 (255)
T ss_dssp TT-EEEEEEEESBTTCSBTSSSBHHHHCTH-HHH---CTTT--------------------SSE-EEEEEEESGGGSCCG
T ss_pred CCeEEEEEecccCCCCCCCeEEeHHHHHHH-HHH---hhcc--------------------cCc-eEEEEEECCCCcccc
Confidence 46789999999 6677776554321 111 1000 012 66677765 69998
Q ss_pred CccChHHHHHHHHHHhCCC
Q 024521 236 PYAQPSRALHLFSSFVHGR 254 (266)
Q Consensus 236 p~dqP~~~~~~i~~fl~~~ 254 (266)
-.+.|+ +.++|.+||-++
T Consensus 238 LheN~~-V~~~I~~FLw~k 255 (255)
T PF06028_consen 238 LHENPQ-VDKLIIQFLWGK 255 (255)
T ss_dssp GGCCHH-HHHHHHHHHCT-
T ss_pred CCCCHH-HHHHHHHHhcCC
Confidence 777775 557788898654
No 111
>PLN00021 chlorophyllase
Probab=92.10 E-value=0.41 Score=42.19 Aligned_cols=65 Identities=14% Similarity=0.037 Sum_probs=39.4
Q ss_pred ccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHh-CC---CCCCCCeEEEeeCCCCccHHHHHHHH
Q 024521 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEK-FP---EFKSRELFLTGESYAGHYIPQLADVL 78 (266)
Q Consensus 6 ~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~-~p---~~~~~~~~i~GeSYgG~yvp~la~~i 78 (266)
.+.|+.+|.+ | ++.... ..+...+.++..++.+.++. .| +....+++|+|+|+||..+-.+|...
T Consensus 79 G~~VvapD~~-g--~~~~~~-----~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~ 147 (313)
T PLN00021 79 GFIVVAPQLY-T--LAGPDG-----TDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGK 147 (313)
T ss_pred CCEEEEecCC-C--cCCCCc-----hhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhc
Confidence 3678899988 4 321111 12233355666666654432 22 23346799999999998777777643
No 112
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=91.99 E-value=2.8 Score=35.27 Aligned_cols=65 Identities=18% Similarity=0.284 Sum_probs=40.6
Q ss_pred ccceEEeeCCCCcccccccCCCCCCCCc-HHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHH
Q 024521 6 ASNLLFVESPAGVGWSYSNTTSDYNCGD-ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQL 74 (266)
Q Consensus 6 ~an~l~iD~PvG~GfS~~~~~~~~~~~~-~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~l 74 (266)
-..||-.|-= |.|-|..+..+..+..- +-+..|+-..|..-=+.-| .+|.|.+|+||||+..=-+
T Consensus 57 Gf~Vlt~dyR-G~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~ 122 (281)
T COG4757 57 GFEVLTFDYR-GIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLL 122 (281)
T ss_pred CceEEEEecc-cccCCCccccccCccchhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeeccc
Confidence 3467888887 99988765544333332 3344566555544333333 5799999999999744333
No 113
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=91.94 E-value=3.7 Score=35.66 Aligned_cols=34 Identities=21% Similarity=0.378 Sum_probs=31.5
Q ss_pred eEEEEEcCCcccCCccChHHHHHHHHHHhCCCCC
Q 024521 223 LTFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 256 (266)
Q Consensus 223 ltf~~V~~AGH~vp~dqP~~~~~~i~~fl~~~~~ 256 (266)
-|++.|.++|-++..+||....+-++=|+.|..+
T Consensus 275 ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~Gy 308 (326)
T KOG2931|consen 275 TTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMGY 308 (326)
T ss_pred ceEEEEcccCCcccccCchHHHHHHHHHHccCCc
Confidence 7789999999999999999999999999999765
No 114
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=91.84 E-value=0.25 Score=41.20 Aligned_cols=40 Identities=20% Similarity=0.257 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHh
Q 024521 39 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 81 (266)
Q Consensus 39 ~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~ 81 (266)
++...+....+++|. .+++++|||.||..+..+|..+.++
T Consensus 113 ~~~~~~~~~~~~~p~---~~i~vtGHSLGGaiA~l~a~~l~~~ 152 (229)
T cd00519 113 QVLPELKSALKQYPD---YKIIVTGHSLGGALASLLALDLRLR 152 (229)
T ss_pred HHHHHHHHHHhhCCC---ceEEEEccCHHHHHHHHHHHHHHhh
Confidence 334445555555554 5799999999998888888777654
No 115
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=91.75 E-value=0.27 Score=40.54 Aligned_cols=39 Identities=15% Similarity=0.258 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHH
Q 024521 37 ARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADV 77 (266)
Q Consensus 37 a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~ 77 (266)
-.|+..++..|++.+++ +|||.|+|||-|+..+-.|-++
T Consensus 77 y~DV~~AF~~yL~~~n~--GRPfILaGHSQGs~~l~~LL~e 115 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNN--GRPFILAGHSQGSMHLLRLLKE 115 (207)
T ss_pred HHHHHHHHHHHHHhcCC--CCCEEEEEeChHHHHHHHHHHH
Confidence 35788889999998854 8999999999999654444443
No 116
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=91.44 E-value=0.29 Score=44.26 Aligned_cols=43 Identities=21% Similarity=0.328 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCC-CCeEEEeeCCCCccHHHHHHHH
Q 024521 35 STARDMHVFMMNWYEKFPEFKS-RELFLTGESYAGHYIPQLADVL 78 (266)
Q Consensus 35 ~~a~~~~~fl~~f~~~~p~~~~-~~~~i~GeSYgG~yvp~la~~i 78 (266)
..|.|...+|..-.+.+|.... .|+.++|.|||| |...|+.+|
T Consensus 161 MqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~ 204 (403)
T PF11144_consen 161 MQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKI 204 (403)
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhh
Confidence 4578999999988889999986 899999999998 444444444
No 117
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=91.27 E-value=0.15 Score=45.08 Aligned_cols=55 Identities=18% Similarity=0.144 Sum_probs=35.9
Q ss_pred CCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccC-hHHH
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQ-PSRA 243 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dq-P~~~ 243 (266)
..||++-.|-.|.+||..++-...+++.. . -+..+.+..||-.+.+. -++.
T Consensus 262 ~~pvl~~~gl~D~~cPP~t~fA~yN~i~~---------------------------~-K~l~vyp~~~He~~~~~~~~~~ 313 (320)
T PF05448_consen 262 KCPVLFSVGLQDPVCPPSTQFAAYNAIPG---------------------------P-KELVVYPEYGHEYGPEFQEDKQ 313 (320)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHCC--S---------------------------S-EEEEEETT--SSTTHHHHHHHH
T ss_pred CCCEEEEEecCCCCCCchhHHHHHhccCC---------------------------C-eeEEeccCcCCCchhhHHHHHH
Confidence 68999999999999999999888877531 1 34488889999886654 4444
Q ss_pred HHHH
Q 024521 244 LHLF 247 (266)
Q Consensus 244 ~~~i 247 (266)
++-+
T Consensus 314 ~~~l 317 (320)
T PF05448_consen 314 LNFL 317 (320)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 118
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=91.21 E-value=0.2 Score=41.46 Aligned_cols=65 Identities=22% Similarity=0.248 Sum_probs=49.6
Q ss_pred ccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHH
Q 024521 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVL 78 (266)
Q Consensus 6 ~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i 78 (266)
..||+-|+-- |-|-|.+.+.+.--..|.+++- +.+...|.+.+.++.++|-|-||..+-.+|.+-
T Consensus 106 ~mnv~ivsYR-GYG~S~GspsE~GL~lDs~avl-------dyl~t~~~~dktkivlfGrSlGGAvai~lask~ 170 (300)
T KOG4391|consen 106 KMNVLIVSYR-GYGKSEGSPSEEGLKLDSEAVL-------DYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKN 170 (300)
T ss_pred CceEEEEEee-ccccCCCCccccceeccHHHHH-------HHHhcCccCCcceEEEEecccCCeeEEEeeccc
Confidence 4689999987 9999998765543344555443 345568889999999999999998887777754
No 119
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=90.90 E-value=0.05 Score=48.36 Aligned_cols=71 Identities=17% Similarity=0.255 Sum_probs=44.5
Q ss_pred cccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHH
Q 024521 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (266)
Q Consensus 5 ~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~ 80 (266)
...|||.||=-.|..-.|... ..+...+++.+-.||....... .+....+||+|+|.|+|.+-..++.+..
T Consensus 103 ~d~NVI~VDWs~~a~~~Y~~a----~~n~~~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 103 GDYNVIVVDWSRGASNNYPQA----VANTRLVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp S-EEEEEEE-HHHHSS-HHHH----HHHHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred CCceEEEEcchhhccccccch----hhhHHHHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 468999999765554333321 1234455666666666655332 2445689999999999988888887755
No 120
>PLN02719 triacylglycerol lipase
Probab=90.74 E-value=0.41 Score=44.59 Aligned_cols=48 Identities=15% Similarity=0.117 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCC--CCCCeEEEeeCCCCccHHHHHHHHHHh
Q 024521 34 ASTARDMHVFMMNWYEKFPEF--KSRELFLTGESYAGHYIPQLADVLLDH 81 (266)
Q Consensus 34 ~~~a~~~~~fl~~f~~~~p~~--~~~~~~i~GeSYgG~yvp~la~~i~~~ 81 (266)
..+.++++..++...+.+|+. ....+.|+|||.||..+--.|..|.+.
T Consensus 273 ~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~ 322 (518)
T PLN02719 273 FSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEM 322 (518)
T ss_pred hhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHh
Confidence 456788999999999999865 335799999999998888888777653
No 121
>PLN02753 triacylglycerol lipase
Probab=90.33 E-value=0.48 Score=44.32 Aligned_cols=49 Identities=14% Similarity=0.083 Sum_probs=38.7
Q ss_pred CcHHHHHHHHHHHHHHHHhCCC--CCCCCeEEEeeCCCCccHHHHHHHHHH
Q 024521 32 GDASTARDMHVFMMNWYEKFPE--FKSRELFLTGESYAGHYIPQLADVLLD 80 (266)
Q Consensus 32 ~~~~~a~~~~~fl~~f~~~~p~--~~~~~~~i~GeSYgG~yvp~la~~i~~ 80 (266)
+...+.++++..++...+++|. .....++|+|||.||..+-..|..|..
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~ 335 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAE 335 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHH
Confidence 3456778999999999888864 234579999999999888888877765
No 122
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=89.60 E-value=0.39 Score=44.22 Aligned_cols=48 Identities=19% Similarity=0.218 Sum_probs=36.3
Q ss_pred CCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHhc
Q 024521 31 CGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHN 82 (266)
Q Consensus 31 ~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~~ 82 (266)
.|.+|+-+|+..|++.+-..+....+.|+.++|-|||| .||..+....
T Consensus 87 Lt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G----~Laaw~r~ky 134 (434)
T PF05577_consen 87 LTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGG----ALAAWFRLKY 134 (434)
T ss_dssp -SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHH----HHHHHHHHH-
T ss_pred cCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchh----HHHHHHHhhC
Confidence 47889999999999998877766677899999999999 5665554443
No 123
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=88.73 E-value=0.89 Score=41.23 Aligned_cols=67 Identities=19% Similarity=0.332 Sum_probs=42.0
Q ss_pred ccceEEee-------CCCCcccccccCCC-CCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHH
Q 024521 6 ASNLLFVE-------SPAGVGWSYSNTTS-DYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLA 75 (266)
Q Consensus 6 ~an~l~iD-------~PvG~GfS~~~~~~-~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la 75 (266)
.|-|+|++ +|.|.- ||.+... +| .+.+|+-.|+...|+ +++....-+..|+..+|-||||+.++.+=
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgy-LtseQALADfA~ll~-~lK~~~~a~~~pvIafGGSYGGMLaAWfR 185 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQ-SYKDARHLGY-LTSEQALADFAELLT-FLKRDLSAEASPVIAFGGSYGGMLAAWFR 185 (492)
T ss_pred CceEEEeehhccccCCCCcch-hccChhhhcc-ccHHHHHHHHHHHHH-HHhhccccccCcEEEecCchhhHHHHHHH
Confidence 46678887 577766 5543221 22 355666667666555 44444445678999999999996554443
No 124
>PLN02408 phospholipase A1
Probab=88.68 E-value=0.78 Score=41.19 Aligned_cols=46 Identities=13% Similarity=0.063 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHh
Q 024521 35 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 81 (266)
Q Consensus 35 ~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~ 81 (266)
.+.+++.+-++.+.+.+|+. ...++|+|||.||..+-..|..|...
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~ 224 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTT 224 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHh
Confidence 55678888899999988865 34699999999998877777777543
No 125
>PLN02324 triacylglycerol lipase
Probab=88.23 E-value=0.91 Score=41.37 Aligned_cols=47 Identities=15% Similarity=0.064 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHh
Q 024521 34 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 81 (266)
Q Consensus 34 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~ 81 (266)
..+.+++...|+.+.+.+|.. ...+.|+|||.||..+--.|..|...
T Consensus 193 ~SareqVl~eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~dl~~~ 239 (415)
T PLN02324 193 TSAQEQVQGELKRLLELYKNE-EISITFTGHSLGAVMSVLSAADLVYG 239 (415)
T ss_pred hHHHHHHHHHHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHHHHHHh
Confidence 456778888899999888853 23699999999998877777777653
No 126
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=88.15 E-value=0.73 Score=39.51 Aligned_cols=64 Identities=19% Similarity=0.174 Sum_probs=41.9
Q ss_pred ccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHH
Q 024521 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLAD 76 (266)
Q Consensus 6 ~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~ 76 (266)
-+.+|.+|.- |+|-|.+.-... ....++|.+..+ +|+..-|--.+ .+-++|.||+|......|.
T Consensus 57 GY~vV~~D~R-G~g~S~G~~~~~----~~~e~~D~~d~I-~W~~~Qpws~G-~VGm~G~SY~G~~q~~~A~ 120 (272)
T PF02129_consen 57 GYAVVVQDVR-GTGGSEGEFDPM----SPNEAQDGYDTI-EWIAAQPWSNG-KVGMYGISYGGFTQWAAAA 120 (272)
T ss_dssp T-EEEEEE-T-TSTTS-S-B-TT----SHHHHHHHHHHH-HHHHHCTTEEE-EEEEEEETHHHHHHHHHHT
T ss_pred CCEEEEECCc-ccccCCCccccC----ChhHHHHHHHHH-HHHHhCCCCCC-eEEeeccCHHHHHHHHHHh
Confidence 5678999987 999999865421 445555655544 35555665544 6999999999977766666
No 127
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=88.09 E-value=1 Score=37.41 Aligned_cols=48 Identities=13% Similarity=0.153 Sum_probs=34.5
Q ss_pred cHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHh
Q 024521 33 DASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 81 (266)
Q Consensus 33 ~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~ 81 (266)
.+..++.+.+.|.+..+..+.- .+++.++|+|+||.++-+....+.+.
T Consensus 55 I~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~ 102 (217)
T PF05057_consen 55 IDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDK 102 (217)
T ss_pred hHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhc
Confidence 4556777888888777766543 46899999999998776655555443
No 128
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=87.50 E-value=1.6 Score=45.71 Aligned_cols=65 Identities=14% Similarity=0.090 Sum_probs=45.9
Q ss_pred cccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHh
Q 024521 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 81 (266)
Q Consensus 5 ~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~ 81 (266)
....++-+|.| |.|-+.. ...+.++.|+++...++.. .| ..|++|+|+|+||..+..+|..+.++
T Consensus 1093 ~~~~v~~~~~~-g~~~~~~-----~~~~l~~la~~~~~~i~~~---~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~ 1157 (1296)
T PRK10252 1093 PQWSIYGIQSP-RPDGPMQ-----TATSLDEVCEAHLATLLEQ---QP---HGPYHLLGYSLGGTLAQGIAARLRAR 1157 (1296)
T ss_pred CCCcEEEEECC-CCCCCCC-----CCCCHHHHHHHHHHHHHhh---CC---CCCEEEEEechhhHHHHHHHHHHHHc
Confidence 35678899999 7764311 1236677788877777641 12 35899999999999888888877544
No 129
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=87.33 E-value=1.2 Score=39.60 Aligned_cols=61 Identities=8% Similarity=-0.041 Sum_probs=36.8
Q ss_pred ccceEEeeCCCCcccccccCCCCCCCCcHHHH-HHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHH
Q 024521 6 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTA-RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLAD 76 (266)
Q Consensus 6 ~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a-~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~ 76 (266)
..+++-+|.. |.|.|... .+....+ .++-.++....+.. ...+++++|+|+||..+..++.
T Consensus 94 G~~V~~~D~~-g~g~s~~~------~~~~d~~~~~~~~~v~~l~~~~---~~~~i~lvGhS~GG~i~~~~~~ 155 (350)
T TIGR01836 94 GQDVYLIDWG-YPDRADRY------LTLDDYINGYIDKCVDYICRTS---KLDQISLLGICQGGTFSLCYAA 155 (350)
T ss_pred CCeEEEEeCC-CCCHHHhc------CCHHHHHHHHHHHHHHHHHHHh---CCCcccEEEECHHHHHHHHHHH
Confidence 4678888986 66755321 1333333 33444444444433 3468999999999976665554
No 130
>KOG3101 consensus Esterase D [General function prediction only]
Probab=87.07 E-value=0.73 Score=38.07 Aligned_cols=17 Identities=24% Similarity=0.339 Sum_probs=13.2
Q ss_pred CCCCCeEEEeeCCCCcc
Q 024521 54 FKSRELFLTGESYAGHY 70 (266)
Q Consensus 54 ~~~~~~~i~GeSYgG~y 70 (266)
+-..++-|+|+||||+=
T Consensus 138 ld~~k~~IfGHSMGGhG 154 (283)
T KOG3101|consen 138 LDPLKVGIFGHSMGGHG 154 (283)
T ss_pred ccchhcceeccccCCCc
Confidence 34456899999999973
No 131
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=86.89 E-value=1.1 Score=42.49 Aligned_cols=124 Identities=17% Similarity=0.215 Sum_probs=76.0
Q ss_pred CcHHHHHHHHHHHHHHH-HhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHhcccCCCceeeechhhccccccCcCCCchh
Q 024521 32 GDASTARDMHVFMMNWY-EKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAATKMSVGVDVCMTL 110 (266)
Q Consensus 32 ~~~~~a~~~~~fl~~f~-~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~~~~~~~~~~nl~Gi~~~~~~~~~~~c~~~ 110 (266)
+..+.++.+..|.+.-+ +..-+|..++++|+|-|+|. .++..+.-.|. .+.+.++ .|..+
T Consensus 224 nI~h~ae~~vSf~r~kvlei~gefpha~IiLvGrsmGA----lVachVSpsns-----dv~V~~v----------VCigy 284 (784)
T KOG3253|consen 224 NIKHAAEYSVSFDRYKVLEITGEFPHAPIILVGRSMGA----LVACHVSPSNS-----DVEVDAV----------VCIGY 284 (784)
T ss_pred chHHHHHHHHHHhhhhhhhhhccCCCCceEEEecccCc----eeeEEeccccC-----CceEEEE----------EEecc
Confidence 56788888888888644 55778889999999999993 22222211111 1123333 34432
Q ss_pred hhhhhcCcHHHHHHhCCCCCCCCCCCccccccccccCCCCCCChHHHHHHHHhCCCcEEEEecCCccccCccchHHHHHH
Q 024521 111 ERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSDTDSNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRE 190 (266)
Q Consensus 111 ~~~~yln~~~V~~aL~v~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~l~~Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~ 190 (266)
.+ + ++.- | ...+ =+.|++.+.+||+..|..|..|+-..-|.+-++
T Consensus 285 pl----~--------~vdg---p---------------rgir-----DE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreK 329 (784)
T KOG3253|consen 285 PL----D--------TVDG---P---------------RGIR-----DEALLDMKQPVLFVIGSNDHMCSPNSMEEVREK 329 (784)
T ss_pred cc----c--------CCCc---c---------------cCCc-----chhhHhcCCceEEEecCCcccCCHHHHHHHHHH
Confidence 21 0 0100 0 0001 124677799999999999999998877777777
Q ss_pred HHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCc
Q 024521 191 LARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPY 237 (266)
Q Consensus 191 l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~ 237 (266)
|.. . -..++|.+|+|..-.
T Consensus 330 MqA---------------------------~-~elhVI~~adhsmai 348 (784)
T KOG3253|consen 330 MQA---------------------------E-VELHVIGGADHSMAI 348 (784)
T ss_pred hhc---------------------------c-ceEEEecCCCccccC
Confidence 531 1 345889999997544
No 132
>PLN00413 triacylglycerol lipase
Probab=86.89 E-value=0.74 Score=42.59 Aligned_cols=38 Identities=18% Similarity=0.375 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHH
Q 024521 39 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLL 79 (266)
Q Consensus 39 ~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~ 79 (266)
++...|+++++.+|++ +++++|||.||..+-..|..+.
T Consensus 269 ~i~~~Lk~ll~~~p~~---kliVTGHSLGGALAtLaA~~L~ 306 (479)
T PLN00413 269 TILRHLKEIFDQNPTS---KFILSGHSLGGALAILFTAVLI 306 (479)
T ss_pred HHHHHHHHHHHHCCCC---eEEEEecCHHHHHHHHHHHHHH
Confidence 5667788888888754 6999999999987777766554
No 133
>PRK10162 acetyl esterase; Provisional
Probab=86.54 E-value=1.9 Score=37.89 Aligned_cols=60 Identities=22% Similarity=0.246 Sum_probs=40.2
Q ss_pred CcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCcc-----Ch
Q 024521 166 IPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYA-----QP 240 (266)
Q Consensus 166 i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~d-----qP 240 (266)
-|++|.+|..|.++. .++.+.+.|... |...++.++.|++|-.... .-
T Consensus 249 Pp~~i~~g~~D~L~d--e~~~~~~~L~~a-------------------------Gv~v~~~~~~g~~H~f~~~~~~~~~a 301 (318)
T PRK10162 249 PPCFIAGAEFDPLLD--DSRLLYQTLAAH-------------------------QQPCEFKLYPGTLHAFLHYSRMMDTA 301 (318)
T ss_pred CCeEEEecCCCcCcC--hHHHHHHHHHHc-------------------------CCCEEEEEECCCceehhhccCchHHH
Confidence 389999999999864 567777776431 1117788899999954332 23
Q ss_pred HHHHHHHHHHhC
Q 024521 241 SRALHLFSSFVH 252 (266)
Q Consensus 241 ~~~~~~i~~fl~ 252 (266)
+.+++-+-+|+.
T Consensus 302 ~~~~~~~~~~l~ 313 (318)
T PRK10162 302 DDALRDGAQFFT 313 (318)
T ss_pred HHHHHHHHHHHH
Confidence 455666666764
No 134
>PLN02934 triacylglycerol lipase
Probab=86.47 E-value=1.1 Score=41.84 Aligned_cols=39 Identities=15% Similarity=0.235 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHH
Q 024521 38 RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLL 79 (266)
Q Consensus 38 ~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~ 79 (266)
..+...++++++.+|.+ +++++|||.||..+-..|..+.
T Consensus 305 ~~v~~~lk~ll~~~p~~---kIvVTGHSLGGALAtLaA~~L~ 343 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNA---KFVVTGHSLGGALAILFPTVLV 343 (515)
T ss_pred HHHHHHHHHHHHHCCCC---eEEEeccccHHHHHHHHHHHHH
Confidence 35667788888888875 7999999999987777665554
No 135
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=86.15 E-value=0.84 Score=40.66 Aligned_cols=43 Identities=19% Similarity=0.296 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHhcc
Q 024521 38 RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNA 83 (266)
Q Consensus 38 ~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~~~ 83 (266)
.++.+-++.....+| +..++++|+|.||.++...|..|.+...
T Consensus 155 ~~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~ 197 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGL 197 (336)
T ss_pred HHHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCC
Confidence 345555566666677 4589999999999999999999887643
No 136
>PLN02761 lipase class 3 family protein
Probab=85.81 E-value=1.5 Score=41.11 Aligned_cols=47 Identities=13% Similarity=0.035 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCC---CCCCeEEEeeCCCCccHHHHHHHHHH
Q 024521 34 ASTARDMHVFMMNWYEKFPEF---KSRELFLTGESYAGHYIPQLADVLLD 80 (266)
Q Consensus 34 ~~~a~~~~~fl~~f~~~~p~~---~~~~~~i~GeSYgG~yvp~la~~i~~ 80 (266)
..+.++++..++...+.+|.. ....++|+|||.||..+--.|..|..
T Consensus 268 ~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~ 317 (527)
T PLN02761 268 FSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAE 317 (527)
T ss_pred hhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHH
Confidence 456788899999988888543 22359999999999887777777754
No 137
>PRK07868 acyl-CoA synthetase; Validated
Probab=85.66 E-value=1.5 Score=44.91 Aligned_cols=61 Identities=18% Similarity=0.188 Sum_probs=48.0
Q ss_pred CCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEE-EEEcCCcccC---CccC
Q 024521 164 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTF-VTVRGAAHMV---PYAQ 239 (266)
Q Consensus 164 ~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf-~~V~~AGH~v---p~dq 239 (266)
...|+|++.|..|.++|...++.+.+.+ .+ ..+ ..+.++|||. --.-
T Consensus 296 i~~P~L~i~G~~D~ivp~~~~~~l~~~i----------------------------~~-a~~~~~~~~~GH~g~~~g~~a 346 (994)
T PRK07868 296 ITCPVLAFVGEVDDIGQPASVRGIRRAA----------------------------PN-AEVYESLIRAGHFGLVVGSRA 346 (994)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhC----------------------------CC-CeEEEEeCCCCCEeeeechhh
Confidence 3679999999999999999888887662 23 444 5678999994 4446
Q ss_pred hHHHHHHHHHHhCC
Q 024521 240 PSRALHLFSSFVHG 253 (266)
Q Consensus 240 P~~~~~~i~~fl~~ 253 (266)
|+..+..+.+||..
T Consensus 347 ~~~~wp~i~~wl~~ 360 (994)
T PRK07868 347 AQQTWPTVADWVKW 360 (994)
T ss_pred hhhhChHHHHHHHH
Confidence 78888999999974
No 138
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=85.62 E-value=1.8 Score=36.13 Aligned_cols=33 Identities=21% Similarity=0.224 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHhC--CCCCCCCeEEEeeCCCCc
Q 024521 37 ARDMHVFMMNWYEKF--PEFKSRELFLTGESYAGH 69 (266)
Q Consensus 37 a~~~~~fl~~f~~~~--p~~~~~~~~i~GeSYgG~ 69 (266)
++.+.+.++...+.+ ..-..+++.|+||||||.
T Consensus 63 ~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGl 97 (225)
T PF07819_consen 63 AEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGL 97 (225)
T ss_pred HHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhH
Confidence 444444555444443 123467899999999994
No 139
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=85.48 E-value=1.2 Score=36.15 Aligned_cols=49 Identities=16% Similarity=0.285 Sum_probs=41.4
Q ss_pred CCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHhc
Q 024521 31 CGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHN 82 (266)
Q Consensus 31 ~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~~ 82 (266)
++..++|.|+-+.++.+.+.. +.+.+-|+|.|+|.-.+|.+..++....
T Consensus 45 rtP~~~a~Dl~~~i~~y~~~w---~~~~vvLiGYSFGADvlP~~~nrLp~~~ 93 (192)
T PF06057_consen 45 RTPEQTAADLARIIRHYRARW---GRKRVVLIGYSFGADVLPFIYNRLPAAL 93 (192)
T ss_pred CCHHHHHHHHHHHHHHHHHHh---CCceEEEEeecCCchhHHHHHhhCCHHH
Confidence 578899999999998877754 4678999999999999999999886654
No 140
>PLN02162 triacylglycerol lipase
Probab=85.46 E-value=1.1 Score=41.39 Aligned_cols=38 Identities=16% Similarity=0.308 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHH
Q 024521 39 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLL 79 (266)
Q Consensus 39 ~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~ 79 (266)
.+...|++++.++|.+ +++++|||.||..+-..|..+.
T Consensus 263 ~I~~~L~~lL~k~p~~---kliVTGHSLGGALAtLaAa~L~ 300 (475)
T PLN02162 263 TIRQMLRDKLARNKNL---KYILTGHSLGGALAALFPAILA 300 (475)
T ss_pred HHHHHHHHHHHhCCCc---eEEEEecChHHHHHHHHHHHHH
Confidence 4455667777777754 7999999999987666655443
No 141
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=84.98 E-value=2.8 Score=34.89 Aligned_cols=57 Identities=23% Similarity=0.377 Sum_probs=43.7
Q ss_pred CCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccCh--HH
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP--SR 242 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP--~~ 242 (266)
.+|.|-+-|+.|.+++..-++.+.++. .+ - .+...-+||+||.-.| +.
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~----------------------------~~-a-~vl~HpggH~VP~~~~~~~~ 212 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESF----------------------------KD-A-TVLEHPGGHIVPNKAKYKEK 212 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhc----------------------------CC-C-eEEecCCCccCCCchHHHHH
Confidence 689999999999999999999888882 22 1 3677889999998775 44
Q ss_pred HHHHHHHHh
Q 024521 243 ALHLFSSFV 251 (266)
Q Consensus 243 ~~~~i~~fl 251 (266)
+.+.|..++
T Consensus 213 i~~fi~~~~ 221 (230)
T KOG2551|consen 213 IADFIQSFL 221 (230)
T ss_pred HHHHHHHHH
Confidence 555555544
No 142
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=84.94 E-value=2.7 Score=37.48 Aligned_cols=49 Identities=27% Similarity=0.329 Sum_probs=33.6
Q ss_pred HHHHH-HHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHhcccCCCceeeechhh
Q 024521 42 VFMMN-WYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVA 96 (266)
Q Consensus 42 ~fl~~-f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~~~~~~~~~~nl~Gi~ 96 (266)
.++.+ |....=+. ..++|+|.|-||-.+-.+|+++.+.. ..++.++|.+
T Consensus 152 w~~~~~~~~~~~D~--~rv~l~GDSaGGNia~~va~r~~~~~----~~~~ki~g~i 201 (336)
T KOG1515|consen 152 WVLKNSWLKLGADP--SRVFLAGDSAGGNIAHVVAQRAADEK----LSKPKIKGQI 201 (336)
T ss_pred HHHHhHHHHhCCCc--ccEEEEccCccHHHHHHHHHHHhhcc----CCCcceEEEE
Confidence 33333 55554333 34999999999999999998887643 1245778876
No 143
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=83.67 E-value=1.7 Score=34.74 Aligned_cols=44 Identities=23% Similarity=0.431 Sum_probs=34.4
Q ss_pred CCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCcc
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYA 238 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~d 238 (266)
.++.+++.++.|..||+.-++.+.+.+ + ..++.+.++||+-..+
T Consensus 114 ~~~~~viaS~nDp~vp~~~a~~~A~~l-----------------------------~-a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 114 PFPSIVIASDNDPYVPFERAQRLAQRL-----------------------------G-AELIILGGGGHFNAAS 157 (171)
T ss_dssp HCCEEEEEETTBSSS-HHHHHHHHHHH-----------------------------T--EEEEETS-TTSSGGG
T ss_pred CCCeEEEEcCCCCccCHHHHHHHHHHc-----------------------------C-CCeEECCCCCCccccc
Confidence 466689999999999999998888884 2 6779999999997654
No 144
>PLN02802 triacylglycerol lipase
Probab=83.50 E-value=1.7 Score=40.59 Aligned_cols=46 Identities=20% Similarity=0.129 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHh
Q 024521 35 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 81 (266)
Q Consensus 35 ~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~ 81 (266)
.+.+++..-++.+++.+|.- ...++|+|||.||..+-..|..|...
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~ 354 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATC 354 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHh
Confidence 45677888888888887643 24699999999998887777777543
No 145
>PLN02310 triacylglycerol lipase
Probab=83.13 E-value=1.8 Score=39.39 Aligned_cols=46 Identities=15% Similarity=0.041 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHhCCCC-CCCCeEEEeeCCCCccHHHHHHHHHH
Q 024521 35 STARDMHVFMMNWYEKFPEF-KSRELFLTGESYAGHYIPQLADVLLD 80 (266)
Q Consensus 35 ~~a~~~~~fl~~f~~~~p~~-~~~~~~i~GeSYgG~yvp~la~~i~~ 80 (266)
.+.+++...++...+.+++- ....+.|+|||.||..+-..|..|..
T Consensus 186 sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~ 232 (405)
T PLN02310 186 SASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAAT 232 (405)
T ss_pred hHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHH
Confidence 45567777777777766532 23469999999999877666666543
No 146
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=83.03 E-value=2.8 Score=35.34 Aligned_cols=61 Identities=28% Similarity=0.495 Sum_probs=47.6
Q ss_pred CcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChH---H
Q 024521 166 IPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPS---R 242 (266)
Q Consensus 166 i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~---~ 242 (266)
.|+|+.+|..|.+||....+.+.+.... .+ .....+.+++|....+.+. +
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~--------------------------~~-~~~~~~~~~~H~~~~~~~~~~~~ 285 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARE--------------------------RP-KKLLFVPGGGHIDLYDNPPAVEQ 285 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhcc--------------------------CC-ceEEEecCCccccccCccHHHHH
Confidence 7999999999999999988888777211 12 6778899999999986665 5
Q ss_pred HHHHHHHHhCC
Q 024521 243 ALHLFSSFVHG 253 (266)
Q Consensus 243 ~~~~i~~fl~~ 253 (266)
++.-+.+|+..
T Consensus 286 ~~~~~~~f~~~ 296 (299)
T COG1073 286 ALDKLAEFLER 296 (299)
T ss_pred HHHHHHHHHHH
Confidence 77767777643
No 147
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=83.01 E-value=23 Score=31.89 Aligned_cols=69 Identities=16% Similarity=0.047 Sum_probs=50.0
Q ss_pred HHHHHhCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCc
Q 024521 158 LKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPY 237 (266)
Q Consensus 158 l~~Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~ 237 (266)
.+.|-.-..|||+..=..|.+.|..-.+...+.+..... |. .+....||-...
T Consensus 299 ~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~------------------~~---------~i~S~~GHDaFL 351 (368)
T COG2021 299 TAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGA------------------LR---------EIDSPYGHDAFL 351 (368)
T ss_pred HHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCc------------------eE---------EecCCCCchhhh
Confidence 333433478999999999999999998888888532100 11 223345999988
Q ss_pred cChHHHHHHHHHHhCC
Q 024521 238 AQPSRALHLFSSFVHG 253 (266)
Q Consensus 238 dqP~~~~~~i~~fl~~ 253 (266)
--.+....+|+.||..
T Consensus 352 ~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 352 VESEAVGPLIRKFLAL 367 (368)
T ss_pred cchhhhhHHHHHHhhc
Confidence 8888888999999864
No 148
>PLN02847 triacylglycerol lipase
Probab=82.57 E-value=2 Score=40.92 Aligned_cols=35 Identities=20% Similarity=0.454 Sum_probs=26.1
Q ss_pred HHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHH
Q 024521 42 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLL 79 (266)
Q Consensus 42 ~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~ 79 (266)
..|++-+..+|+| ++.|+|||+||..+.-++..+.
T Consensus 239 ~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLR 273 (633)
T PLN02847 239 PCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILR 273 (633)
T ss_pred HHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHh
Confidence 3445555668776 7999999999998877766554
No 149
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=82.46 E-value=2.4 Score=35.63 Aligned_cols=39 Identities=8% Similarity=0.110 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHH
Q 024521 37 ARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVL 78 (266)
Q Consensus 37 a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i 78 (266)
+..+.+||+...... ....++|++||||++.+...-+.+
T Consensus 76 ~~~l~~~L~~L~~~~---~~~~I~ilaHSMG~rv~~~aL~~l 114 (233)
T PF05990_consen 76 GPALARFLRDLARAP---GIKRIHILAHSMGNRVLLEALRQL 114 (233)
T ss_pred HHHHHHHHHHHHhcc---CCceEEEEEeCchHHHHHHHHHHH
Confidence 344444554433321 356899999999997655544444
No 150
>PLN03037 lipase class 3 family protein; Provisional
Probab=82.07 E-value=2.1 Score=40.04 Aligned_cols=47 Identities=17% Similarity=0.082 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHhCCCC-CCCCeEEEeeCCCCccHHHHHHHHHHh
Q 024521 35 STARDMHVFMMNWYEKFPEF-KSRELFLTGESYAGHYIPQLADVLLDH 81 (266)
Q Consensus 35 ~~a~~~~~fl~~f~~~~p~~-~~~~~~i~GeSYgG~yvp~la~~i~~~ 81 (266)
.+.+++..-++...+.+++. ....++|+|||.||..+--.|..|...
T Consensus 295 SareQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~ 342 (525)
T PLN03037 295 SASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARS 342 (525)
T ss_pred hhHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHh
Confidence 34467777777777777643 245799999999998877777666553
No 151
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=80.23 E-value=2.1 Score=39.47 Aligned_cols=47 Identities=11% Similarity=0.178 Sum_probs=35.6
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCCC-CCeEEEeeCCCCccHHHHHHHH
Q 024521 32 GDASTARDMHVFMMNWYEKFPEFKS-RELFLTGESYAGHYIPQLADVL 78 (266)
Q Consensus 32 ~~~~~a~~~~~fl~~f~~~~p~~~~-~~~~i~GeSYgG~yvp~la~~i 78 (266)
...+..++.+.-|+.+++..-+..+ +++.|++|||||.|+-++-...
T Consensus 156 ~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~ 203 (473)
T KOG2369|consen 156 HNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWV 203 (473)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcc
Confidence 3456667777888888876545555 9999999999999888776543
No 152
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=78.91 E-value=3.2 Score=28.49 Aligned_cols=38 Identities=16% Similarity=0.163 Sum_probs=27.0
Q ss_pred cccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHH
Q 024521 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMM 45 (266)
Q Consensus 5 ~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~ 45 (266)
+..+|+-+|+. |+|.|.+.. ....+-++..+|+..|++
T Consensus 42 ~G~~V~~~D~r-GhG~S~g~r--g~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 42 QGYAVFAYDHR-GHGRSEGKR--GHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CCCEEEEECCC-cCCCCCCcc--cccCCHHHHHHHHHHHhC
Confidence 45678999999 999998633 233455677778777653
No 153
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=78.39 E-value=3.9 Score=34.19 Aligned_cols=35 Identities=20% Similarity=0.355 Sum_probs=25.0
Q ss_pred HHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHH
Q 024521 41 HVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLL 79 (266)
Q Consensus 41 ~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~ 79 (266)
.+++....+.+++ +++|+|||-||..+-+.|....
T Consensus 72 ~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~ 106 (224)
T PF11187_consen 72 LAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCD 106 (224)
T ss_pred HHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHcc
Confidence 4555555555554 6999999999987777776643
No 154
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=78.31 E-value=3.6 Score=37.44 Aligned_cols=50 Identities=24% Similarity=0.391 Sum_probs=33.7
Q ss_pred CCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCc
Q 024521 14 SPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGH 69 (266)
Q Consensus 14 ~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~ 69 (266)
.+-|.|-|.-+++.-|.....+ |+-++++.--+.||+ .+++.+|.||||.
T Consensus 161 N~RG~~g~~LtTpr~f~ag~t~---Dl~~~v~~i~~~~P~---a~l~avG~S~Gg~ 210 (409)
T KOG1838|consen 161 NHRGLGGSKLTTPRLFTAGWTE---DLREVVNHIKKRYPQ---APLFAVGFSMGGN 210 (409)
T ss_pred CCCCCCCCccCCCceeecCCHH---HHHHHHHHHHHhCCC---CceEEEEecchHH
Confidence 3558787877766655444443 555555544456774 5999999999996
No 155
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=76.77 E-value=3.3 Score=40.70 Aligned_cols=31 Identities=19% Similarity=0.432 Sum_probs=20.9
Q ss_pred HHHHHHHhCCCCC---CCCeEEEeeCCCCccHHH
Q 024521 43 FMMNWYEKFPEFK---SRELFLTGESYAGHYIPQ 73 (266)
Q Consensus 43 fl~~f~~~~p~~~---~~~~~i~GeSYgG~yvp~ 73 (266)
-+...|+.-+|+. .+.+.|+||||||..+-+
T Consensus 165 ~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra 198 (973)
T KOG3724|consen 165 YILSLYRGEREYASPLPHSVILVGHSMGGIVARA 198 (973)
T ss_pred HHHHHhhcccccCCCCCceEEEEeccchhHHHHH
Confidence 3444555556666 556999999999964433
No 156
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=76.60 E-value=3.5 Score=37.51 Aligned_cols=41 Identities=10% Similarity=0.105 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHH
Q 024521 38 RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVL 78 (266)
Q Consensus 38 ~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i 78 (266)
.+.+..|+..++.-=+.+++++.|+||||||-++-++-+..
T Consensus 100 ~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~ 140 (389)
T PF02450_consen 100 DEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWM 140 (389)
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhc
Confidence 34555566666542233478999999999997666655544
No 157
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=76.41 E-value=1.6 Score=35.46 Aligned_cols=46 Identities=20% Similarity=0.244 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHh---CCCCCCCCeEEEeeCCCCccHHHHHHHHHHh
Q 024521 35 STARDMHVFMMNWYEK---FPEFKSRELFLTGESYAGHYIPQLADVLLDH 81 (266)
Q Consensus 35 ~~a~~~~~fl~~f~~~---~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~ 81 (266)
+..+|+..+++-..+. + .+...+++|+|+|-||+.+..++..+.+.
T Consensus 47 ~~~~D~~~a~~~l~~~~~~~-~~d~~~i~l~G~SAGg~la~~~~~~~~~~ 95 (211)
T PF07859_consen 47 AALEDVKAAYRWLLKNADKL-GIDPERIVLIGDSAGGHLALSLALRARDR 95 (211)
T ss_dssp HHHHHHHHHHHHHHHTHHHH-TEEEEEEEEEEETHHHHHHHHHHHHHHHT
T ss_pred ccccccccceeeeccccccc-cccccceEEeecccccchhhhhhhhhhhh
Confidence 4445555555443332 2 25566899999999999999999877665
No 158
>PRK04940 hypothetical protein; Provisional
Probab=75.78 E-value=5.2 Score=32.24 Aligned_cols=22 Identities=9% Similarity=0.247 Sum_probs=19.0
Q ss_pred CCeEEEeeCCCCccHHHHHHHH
Q 024521 57 RELFLTGESYAGHYIPQLADVL 78 (266)
Q Consensus 57 ~~~~i~GeSYgG~yvp~la~~i 78 (266)
.++.|+|-|.||.|+-.||.+.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~ 81 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC 81 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH
Confidence 4799999999999888888853
No 159
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=75.37 E-value=1.6 Score=36.05 Aligned_cols=48 Identities=27% Similarity=0.332 Sum_probs=30.9
Q ss_pred CCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChH
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPS 241 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~ 241 (266)
.+|+|-+.|..|.+++...++...+.... . ..+.....||.+|...+.
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~~----------------------------~-~~v~~h~gGH~vP~~~~~ 208 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFDP----------------------------D-ARVIEHDGGHHVPRKKED 208 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHHH----------------------------H-EEEEEESSSSS----HHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhccC----------------------------C-cEEEEECCCCcCcCChhh
Confidence 78999999999999998888877777421 1 336778999999987654
No 160
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=74.41 E-value=12 Score=32.06 Aligned_cols=44 Identities=20% Similarity=0.106 Sum_probs=32.5
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHh
Q 024521 32 GDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 81 (266)
Q Consensus 32 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~ 81 (266)
+.++.++.....|+. .-|+ -|++|.|.|+||..+-.+|.++..+
T Consensus 46 ~l~~~a~~yv~~Ir~---~QP~---GPy~L~G~S~GG~vA~evA~qL~~~ 89 (257)
T COG3319 46 SLDDMAAAYVAAIRR---VQPE---GPYVLLGWSLGGAVAFEVAAQLEAQ 89 (257)
T ss_pred CHHHHHHHHHHHHHH---hCCC---CCEEEEeeccccHHHHHHHHHHHhC
Confidence 566667776666663 3443 3899999999998888888877654
No 161
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=73.01 E-value=7.3 Score=34.50 Aligned_cols=38 Identities=32% Similarity=0.535 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHh
Q 024521 38 RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 81 (266)
Q Consensus 38 ~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~ 81 (266)
+|+..||......+| .+|+|.+|.|.||- .+|..+-+.
T Consensus 132 ~D~~~~l~~l~~~~~---~r~~~avG~SLGgn---mLa~ylgee 169 (345)
T COG0429 132 EDIRFFLDWLKARFP---PRPLYAVGFSLGGN---MLANYLGEE 169 (345)
T ss_pred hHHHHHHHHHHHhCC---CCceEEEEecccHH---HHHHHHHhh
Confidence 566666655445565 57999999999994 455555444
No 162
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=71.67 E-value=29 Score=33.70 Aligned_cols=41 Identities=12% Similarity=0.199 Sum_probs=33.7
Q ss_pred ChHHHHHHHHhCCCcEEEEecCCccccCccchHHHHHHHHh
Q 024521 153 NILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELAR 193 (266)
Q Consensus 153 ~~~~~l~~Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~ 193 (266)
++...++.|-+..-|.|+.+|-.|--|-+.-+-..+..+..
T Consensus 790 SV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvk 830 (867)
T KOG2281|consen 790 SVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVK 830 (867)
T ss_pred hHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHh
Confidence 45566777766678899999999999999999999988753
No 163
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=71.30 E-value=5.9 Score=34.23 Aligned_cols=36 Identities=25% Similarity=0.402 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCc
Q 024521 34 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGH 69 (266)
Q Consensus 34 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~ 69 (266)
.+++..+++.+..-....|+=..-++|++|||.|..
T Consensus 86 ~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~ 121 (289)
T PF10081_consen 86 REAARALFEAVYARWSTLPEDRRPKLYLYGESLGAY 121 (289)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCeEEEeccCcccc
Confidence 456778888888888888877666699999999763
No 164
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=71.15 E-value=11 Score=31.50 Aligned_cols=69 Identities=13% Similarity=0.064 Sum_probs=43.3
Q ss_pred cceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHH
Q 024521 7 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (266)
Q Consensus 7 an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~ 80 (266)
++...|+-|.+.+-=.+-..-.+..+..+.++.+...+..+.. ...++.|+|.|.|+..+-...+++.+
T Consensus 3 ~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~ 71 (225)
T PF08237_consen 3 YNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAA 71 (225)
T ss_pred cceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHh
Confidence 4566778886444311111112233555667777778876555 57899999999999766666666554
No 165
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=70.40 E-value=14 Score=30.98 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=28.0
Q ss_pred HHHHhCCCcEEEEecCCccccCccchHHHHHHHH
Q 024521 159 KRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELA 192 (266)
Q Consensus 159 ~~Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~ 192 (266)
+.+-+-+.|||+..|+.|.+||......|-+.++
T Consensus 158 ~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk 191 (242)
T KOG3043|consen 158 ADIANVKAPILFLFAELDEDVPPKDVKAWEEKLK 191 (242)
T ss_pred hHHhcCCCCEEEEeecccccCCHHHHHHHHHHHh
Confidence 3344447899999999999999999988888864
No 166
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=69.42 E-value=7.1 Score=33.26 Aligned_cols=44 Identities=11% Similarity=0.116 Sum_probs=30.3
Q ss_pred CCCCCChHHHHHHHHhC-CCcEEEEecCCccccCccchHHHHHHH
Q 024521 148 TDSNINILPVLKRIIQN-GIPVWVFSGDQDSVVPLLGSRTLIREL 191 (266)
Q Consensus 148 ~d~~~~~~~~l~~Ll~~-~i~VLiy~G~~D~iv~~~g~~~~i~~l 191 (266)
+|.|.-+...-..+++. ...+.+|-|..|..||.......-+.+
T Consensus 224 ~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW~p~~~~d~~kdd~ 268 (301)
T KOG3975|consen 224 AQEMEEVTTRDIEYCEENLDSLWFYYGTNDGWVPSHYYDYYKDDV 268 (301)
T ss_pred hHHHHHHHHhHHHHHHhcCcEEEEEccCCCCCcchHHHHHHhhhc
Confidence 44455555555566654 578999999999999966555554543
No 167
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=66.90 E-value=8.6 Score=34.73 Aligned_cols=28 Identities=21% Similarity=0.370 Sum_probs=23.4
Q ss_pred CCCCeEEEeeCCCCccHHHHHHHHHHhc
Q 024521 55 KSRELFLTGESYAGHYIPQLADVLLDHN 82 (266)
Q Consensus 55 ~~~~~~i~GeSYgG~yvp~la~~i~~~~ 82 (266)
...++.|+|+|-||+.+..+.+.+.+.+
T Consensus 193 G~~nI~LmGDSAGGnL~Ls~LqyL~~~~ 220 (374)
T PF10340_consen 193 GNKNIILMGDSAGGNLALSFLQYLKKPN 220 (374)
T ss_pred CCCeEEEEecCccHHHHHHHHHHHhhcC
Confidence 3468999999999999999988876644
No 168
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=66.19 E-value=8.5 Score=30.60 Aligned_cols=26 Identities=27% Similarity=0.414 Sum_probs=21.8
Q ss_pred CCCCCCeEEEeeCCCCccHHHHHHHH
Q 024521 53 EFKSRELFLTGESYAGHYIPQLADVL 78 (266)
Q Consensus 53 ~~~~~~~~i~GeSYgG~yvp~la~~i 78 (266)
.+..-|+.|.|.||||+.+..+|..+
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~ 110 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADEL 110 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhh
Confidence 45566899999999999888888765
No 169
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=66.13 E-value=27 Score=30.36 Aligned_cols=28 Identities=25% Similarity=0.341 Sum_probs=23.7
Q ss_pred CCCCCeEEEeeCCCCccHHHHHHHHHHh
Q 024521 54 FKSRELFLTGESYAGHYIPQLADVLLDH 81 (266)
Q Consensus 54 ~~~~~~~i~GeSYgG~yvp~la~~i~~~ 81 (266)
...+.+.|+|+|-||+.+..+|....+.
T Consensus 149 ~dp~~i~v~GdSAGG~La~~~a~~~~~~ 176 (312)
T COG0657 149 IDPSRIAVAGDSAGGHLALALALAARDR 176 (312)
T ss_pred CCccceEEEecCcccHHHHHHHHHHHhc
Confidence 3456799999999999999999988665
No 170
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=65.61 E-value=14 Score=32.30 Aligned_cols=68 Identities=21% Similarity=0.184 Sum_probs=37.4
Q ss_pred EEecCCccccCccchHHHHHHHHhcccccccccccccccCCeee-eEEEEeCC-eeEEEEEcCCcccCCccChH
Q 024521 170 VFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVG-GWGTEYGN-LLTFVTVRGAAHMVPYAQPS 241 (266)
Q Consensus 170 iy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~-G~~~~~~~-~ltf~~V~~AGH~vp~dqP~ 241 (266)
|-.|+.|.++|......+...+.+ ....+-+.+..+...+ -|....++ .+.+++|.+.||-.|.-.+.
T Consensus 213 ~g~g~~~~~v~~~~~~~~Waa~ng----~~~~p~~~~~~~~~~~~~~~~~~~~~~V~~y~i~g~GH~wp~~~~~ 282 (312)
T COG3509 213 IGRGQRDGVVSAADLAARWAAVNG----CQAGPDTAELPDVGDGTDYDTCDGNARVELYTIDGGGHTWPGGTQY 282 (312)
T ss_pred cccccccccccHHHHHHHHHHhcC----CCCCCcccccCCCcccceeeccCCCcceEEEEEeCCcccCcCCCCC
Confidence 778999999877766666666432 1111111111111110 11111222 28889999999999975544
No 171
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=64.59 E-value=17 Score=29.26 Aligned_cols=37 Identities=16% Similarity=0.186 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHH
Q 024521 35 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQ 73 (266)
Q Consensus 35 ~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~ 73 (266)
..|.+|..|+..+=..+ -....+-++|||||...+-.
T Consensus 89 ~ga~~L~~f~~gl~a~~--~~~~~~tv~GHSYGS~v~G~ 125 (177)
T PF06259_consen 89 AGAPRLARFLDGLRATH--GPDAHLTVVGHSYGSTVVGL 125 (177)
T ss_pred HHHHHHHHHHHHhhhhc--CCCCCEEEEEecchhHHHHH
Confidence 44566667776654444 11346899999999954433
No 172
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=64.19 E-value=19 Score=31.30 Aligned_cols=217 Identities=12% Similarity=0.087 Sum_probs=104.3
Q ss_pred cceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHhcccCC
Q 024521 7 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 86 (266)
Q Consensus 7 an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~~~~~~ 86 (266)
.-+|=|.-| |-|++.+..... .+. .+--.|+..|++.. ++. ..+.+.|+|.|+--+..+|... ...+
T Consensus 63 iR~I~iN~P-Gf~~t~~~~~~~--~~n----~er~~~~~~ll~~l-~i~-~~~i~~gHSrGcenal~la~~~----~~~g 129 (297)
T PF06342_consen 63 IRFIGINYP-GFGFTPGYPDQQ--YTN----EERQNFVNALLDEL-GIK-GKLIFLGHSRGCENALQLAVTH----PLHG 129 (297)
T ss_pred eEEEEeCCC-CCCCCCCCcccc--cCh----HHHHHHHHHHHHHc-CCC-CceEEEEeccchHHHHHHHhcC----ccce
Confidence 346778899 777776543322 232 33345666666655 354 5688899999998777777743 1000
Q ss_pred CceeeechhhccccccCcCCCch----hhhhhhcCcH-------HHHHHhCCCCCCCCCCCccccccccccCCCCCCChH
Q 024521 87 GFKFNIKGVAATKMSVGVDVCMT----LERFFYLNLP-------EVQKALHANRTNLPYGWSMCSGVLNYSDTDSNINIL 155 (266)
Q Consensus 87 ~~~~nl~Gi~~~~~~~~~~~c~~----~~~~~yln~~-------~V~~aL~v~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 155 (266)
..=+|--|+.+.+ .+.+... ..+...+.++ -+-+.+|..... . ..+-..+.....-....-.
T Consensus 130 ~~lin~~G~r~Hk---gIrp~~r~~~i~~l~~~lp~~~~~~i~~~~y~~iG~KV~~---G-eeA~na~r~m~~~df~~q~ 202 (297)
T PF06342_consen 130 LVLINPPGLRPHK---GIRPLSRMETINYLYDLLPRFIINAIMYFYYRMIGFKVSD---G-EEAINAMRSMQNCDFEEQK 202 (297)
T ss_pred EEEecCCcccccc---CcCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhCeeecC---h-HHHHHHHHHHHhcCHHHHH
Confidence 1112333332211 1111000 0000111111 122233322110 0 0000000000000011224
Q ss_pred HHHHHHHhCCCcEEEEecCCccccCccchHHHHHHHHh--ccccccc--cc--ccccccCCeeeeEEEEeCCeeEEEEEc
Q 024521 156 PVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELAR--DLNFEVT--VP--YGAWFHKQQVGGWGTEYGNLLTFVTVR 229 (266)
Q Consensus 156 ~~l~~Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~--~~~~~~~--~~--~~~w~~~~~~~G~~~~~~~~ltf~~V~ 229 (266)
+.++.|-+..+|||+..|-.|.++--.=....+..+.. .+..... .+ -..++ ..++ +.+..-+.|.
T Consensus 203 ~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf~~~~~~seee~~kI~~---~f~~-----~~~~~sv~f~ 274 (297)
T PF06342_consen 203 EYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHFNIEKEISEEEKPKILK---SFAS-----GQKGASVFFA 274 (297)
T ss_pred HHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhCCccceeeecCCChhHHHHHHH---HHhc-----CCceeEEEEe
Confidence 56666667779999999999998876655555555432 1111110 00 00111 1110 1113347788
Q ss_pred CCcccCCccChHHHHHHHHHHh
Q 024521 230 GAAHMVPYAQPSRALHLFSSFV 251 (266)
Q Consensus 230 ~AGH~vp~dqP~~~~~~i~~fl 251 (266)
.-||+..-.||+-..+.+...+
T Consensus 275 ~dgHf~qK~~A~lIA~~i~~mf 296 (297)
T PF06342_consen 275 KDGHFQQKFRADLIAEAIKKMF 296 (297)
T ss_pred cCChHHhHHHHHHHHHHHHHhh
Confidence 9999999999988888777654
No 173
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=63.59 E-value=11 Score=33.95 Aligned_cols=64 Identities=23% Similarity=0.458 Sum_probs=46.3
Q ss_pred cceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHH
Q 024521 7 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (266)
Q Consensus 7 an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~ 80 (266)
.+||---.| |-|||.+....++ +..++|.=+...+.. +.-++|||-|--+|.....-+|+...+
T Consensus 189 FEVI~PSlP-GygwSd~~sk~GF--n~~a~ArvmrkLMlR-------Lg~nkffiqGgDwGSiI~snlasLyPe 252 (469)
T KOG2565|consen 189 FEVIAPSLP-GYGWSDAPSKTGF--NAAATARVMRKLMLR-------LGYNKFFIQGGDWGSIIGSNLASLYPE 252 (469)
T ss_pred EEEeccCCC-CcccCcCCccCCc--cHHHHHHHHHHHHHH-------hCcceeEeecCchHHHHHHHHHhhcch
Confidence 356666778 9999988766554 667778777776654 777899998877887766666665433
No 174
>COG0627 Predicted esterase [General function prediction only]
Probab=58.43 E-value=16 Score=32.21 Aligned_cols=62 Identities=21% Similarity=0.248 Sum_probs=35.1
Q ss_pred CCCcccccccCCCCCCCCcHHHHHHHHHHHH-----HHHHhCCCCCC-CCeEEEeeCCCCccHHHHHHHH
Q 024521 15 PAGVGWSYSNTTSDYNCGDASTARDMHVFMM-----NWYEKFPEFKS-RELFLTGESYAGHYIPQLADVL 78 (266)
Q Consensus 15 PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~-----~f~~~~p~~~~-~~~~i~GeSYgG~yvp~la~~i 78 (266)
|+|.|.|+=.+...-+.... ..+++.||. .+.+.||--.. ..-.|+|+||||+=+..+|.+-
T Consensus 106 p~G~~~sfY~d~~~~~~~~~--~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~ 173 (316)
T COG0627 106 PLGGGASFYSDWTQPPWASG--PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKH 173 (316)
T ss_pred cCCCccceecccccCccccC--ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhC
Confidence 57888877432211000111 234444443 44455663322 2689999999998777777754
No 175
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=57.81 E-value=11 Score=32.84 Aligned_cols=33 Identities=18% Similarity=0.154 Sum_probs=20.8
Q ss_pred HHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHH
Q 024521 44 MMNWYEKFPEFKSRELFLTGESYAGHYIPQLAD 76 (266)
Q Consensus 44 l~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~ 76 (266)
|.-|....-.|....+.++|+|.||..+..++.
T Consensus 263 ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~ 295 (425)
T KOG4540|consen 263 LDILGAVRRIYPDARIWLTGHSLGGAIASLLGI 295 (425)
T ss_pred HHHHHHHHHhCCCceEEEeccccchHHHHHhcc
Confidence 333333333455668999999999955444443
No 176
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=57.81 E-value=11 Score=32.84 Aligned_cols=33 Identities=18% Similarity=0.154 Sum_probs=20.8
Q ss_pred HHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHH
Q 024521 44 MMNWYEKFPEFKSRELFLTGESYAGHYIPQLAD 76 (266)
Q Consensus 44 l~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~ 76 (266)
|.-|....-.|....+.++|+|.||..+..++.
T Consensus 263 ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~ 295 (425)
T COG5153 263 LDILGAVRRIYPDARIWLTGHSLGGAIASLLGI 295 (425)
T ss_pred HHHHHHHHHhCCCceEEEeccccchHHHHHhcc
Confidence 333333333455668999999999955444443
No 177
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=57.41 E-value=18 Score=32.22 Aligned_cols=44 Identities=18% Similarity=0.151 Sum_probs=31.4
Q ss_pred cHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHH
Q 024521 33 DASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLL 79 (266)
Q Consensus 33 ~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~ 79 (266)
....++++...+.+.+... ..+++.|.|+|+||..+.+++..+-
T Consensus 106 ~~~~~~ql~~~V~~~l~~~---ga~~v~LigHS~GG~~~ry~~~~~~ 149 (336)
T COG1075 106 LAVRGEQLFAYVDEVLAKT---GAKKVNLIGHSMGGLDSRYYLGVLG 149 (336)
T ss_pred ccccHHHHHHHHHHHHhhc---CCCceEEEeecccchhhHHHHhhcC
Confidence 3444666667776655544 3479999999999988887776554
No 178
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=56.99 E-value=26 Score=29.48 Aligned_cols=42 Identities=14% Similarity=0.264 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHH
Q 024521 34 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLAD 76 (266)
Q Consensus 34 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~ 76 (266)
.+...|+..++ +|+...|+-....+.++|.|+||+.+-.+|.
T Consensus 90 ~~~~~d~~a~~-~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~ 131 (236)
T COG0412 90 AEVLADIDAAL-DYLARQPQVDPKRIGVVGFCMGGGLALLAAT 131 (236)
T ss_pred HHHHHHHHHHH-HHHHhCCCCCCceEEEEEEcccHHHHHHhhc
Confidence 34445554444 5677777766778999999999977666665
No 179
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=55.29 E-value=30 Score=32.41 Aligned_cols=46 Identities=20% Similarity=0.271 Sum_probs=35.2
Q ss_pred CCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHH
Q 024521 31 CGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (266)
Q Consensus 31 ~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~ 80 (266)
.+..|+-.|+.+|++.--.+++.-...|+..+|-||.| +||..+-+
T Consensus 146 LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsG----sLsAW~R~ 191 (514)
T KOG2182|consen 146 LSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSG----SLSAWFRE 191 (514)
T ss_pred hhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchh----HHHHHHHH
Confidence 36677888999998887778876666699999999999 45554433
No 180
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=55.02 E-value=18 Score=33.23 Aligned_cols=20 Identities=15% Similarity=0.175 Sum_probs=15.4
Q ss_pred CCeEEEeeCCCCccHHHHHH
Q 024521 57 RELFLTGESYAGHYIPQLAD 76 (266)
Q Consensus 57 ~~~~i~GeSYgG~yvp~la~ 76 (266)
....|+|.||||..+.++|.
T Consensus 288 ~~~~IaG~S~GGl~AL~~al 307 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGL 307 (411)
T ss_pred cceEEEEEChHHHHHHHHHH
Confidence 45899999999966655555
No 181
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=54.52 E-value=38 Score=30.42 Aligned_cols=62 Identities=21% Similarity=0.259 Sum_probs=40.7
Q ss_pred ceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHH
Q 024521 8 NLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADV 77 (266)
Q Consensus 8 n~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~ 77 (266)
++|=...| |-+-|++. .++.++..+++-+.+|-.+-+ .|+..++.|.|-|-||.-+...|..
T Consensus 270 svLGwNhP-GFagSTG~---P~p~n~~nA~DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs~ 331 (517)
T KOG1553|consen 270 SVLGWNHP-GFAGSTGL---PYPVNTLNAADAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAASN 331 (517)
T ss_pred eeeccCCC-CccccCCC---CCcccchHHHHHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhhc
Confidence 44445557 55545443 455677776766666554422 4666799999999999888777763
No 182
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=54.44 E-value=13 Score=34.55 Aligned_cols=37 Identities=16% Similarity=0.091 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHH
Q 024521 39 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLAD 76 (266)
Q Consensus 39 ~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~ 76 (266)
..++++++-+..|. -..+++.|+|+|.||+.+-.++.
T Consensus 159 ~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~~ 195 (493)
T cd00312 159 LALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLLL 195 (493)
T ss_pred HHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHhh
Confidence 44677787777774 45568999999999976655443
No 183
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=53.56 E-value=20 Score=32.82 Aligned_cols=63 Identities=13% Similarity=0.170 Sum_probs=45.0
Q ss_pred CcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCccc---CCccChHH
Q 024521 166 IPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHM---VPYAQPSR 242 (266)
Q Consensus 166 i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~---vp~dqP~~ 242 (266)
.++|.+.|+.|.|||...++...+-... ... .. -++..+.++||+ +-.--+++
T Consensus 339 ~pll~V~ge~D~I~p~~qt~aa~~l~~~---~~s--------------------~~-k~~~~~~~~GH~Gvf~G~r~~~~ 394 (406)
T TIGR01849 339 VALLTVEGENDDISGLGQTKAALRLCTG---IPE--------------------DM-KRHHLQPGVGHYGVFSGSRFREE 394 (406)
T ss_pred cceEEEeccCCCcCCHHHhHHHHHHhhc---CCh--------------------hh-ceEeecCCCCeEEEeeChhhhhh
Confidence 7899999999999999999888775311 100 11 456778899997 33445667
Q ss_pred HHHHHHHHhC
Q 024521 243 ALHLFSSFVH 252 (266)
Q Consensus 243 ~~~~i~~fl~ 252 (266)
..-.+.+||.
T Consensus 395 i~P~i~~wl~ 404 (406)
T TIGR01849 395 IYPLVREFIR 404 (406)
T ss_pred hchHHHHHHH
Confidence 7778888875
No 184
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=53.46 E-value=12 Score=35.85 Aligned_cols=39 Identities=8% Similarity=0.049 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHhCCCCC-CCCeEEEeeCCCCccHHHHHH
Q 024521 38 RDMHVFMMNWYEKFPEFK-SRELFLTGESYAGHYIPQLAD 76 (266)
Q Consensus 38 ~~~~~fl~~f~~~~p~~~-~~~~~i~GeSYgG~yvp~la~ 76 (266)
.+.+.-|+..++..=+.+ ++++.|+||||||.++-+|-.
T Consensus 193 d~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~ 232 (642)
T PLN02517 193 DQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMK 232 (642)
T ss_pred hHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHH
Confidence 444555666555432234 579999999999977777655
No 185
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=53.40 E-value=20 Score=34.23 Aligned_cols=27 Identities=15% Similarity=0.142 Sum_probs=24.2
Q ss_pred CCcEEEEecCCccccCccchHHHHHHH
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIREL 191 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l 191 (266)
..+++++.|..|.|+|+..+....+.+
T Consensus 441 ~~Pvl~va~~~DHIvPw~s~~~~~~l~ 467 (560)
T TIGR01839 441 KCDSFSVAGTNDHITPWDAVYRSALLL 467 (560)
T ss_pred CCCeEEEecCcCCcCCHHHHHHHHHHc
Confidence 679999999999999999998887764
No 186
>PF10609 ParA: ParA/MinD ATPase like; InterPro: IPR019591 This entry represents ATPases involved in plasmid partitioning []. It also contains cytosolic Fe-S cluster assembling factors, NBP35 and CFD1 which are required for biogenesis and export of both ribosomal subunits probably through assembling the ISCs in RLI1, a protein which performs rRNA processing and ribosome export [, , ].; PDB: 2PH1_A 3KB1_B.
Probab=51.64 E-value=9.8 Score=26.38 Aligned_cols=12 Identities=33% Similarity=0.888 Sum_probs=8.5
Q ss_pred ceEEeeCCCCcc
Q 024521 8 NLLFVESPAGVG 19 (266)
Q Consensus 8 n~l~iD~PvG~G 19 (266)
+.|.||.|.|||
T Consensus 2 D~LiiD~PPGTg 13 (81)
T PF10609_consen 2 DYLIIDLPPGTG 13 (81)
T ss_dssp CEEEEE--SCSS
T ss_pred CEEEEeCCCCCC
Confidence 468999999998
No 187
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=51.16 E-value=7.6 Score=32.36 Aligned_cols=35 Identities=20% Similarity=0.145 Sum_probs=21.2
Q ss_pred HHHHHHHH-hCCCCCCCCeEEEeeCCCCccHHHHHHH
Q 024521 42 VFMMNWYE-KFPEFKSRELFLTGESYAGHYIPQLADV 77 (266)
Q Consensus 42 ~fl~~f~~-~~p~~~~~~~~i~GeSYgG~yvp~la~~ 77 (266)
+-|..+++ .++-...+ ..|+|.|+||.-+..+|.+
T Consensus 100 ~el~p~i~~~~~~~~~~-~~i~G~S~GG~~Al~~~l~ 135 (251)
T PF00756_consen 100 EELIPYIEANYRTDPDR-RAIAGHSMGGYGALYLALR 135 (251)
T ss_dssp THHHHHHHHHSSEEECC-EEEEEETHHHHHHHHHHHH
T ss_pred ccchhHHHHhcccccce-eEEeccCCCcHHHHHHHHh
Confidence 33444443 34433333 8999999999665555553
No 188
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=49.72 E-value=11 Score=26.23 Aligned_cols=34 Identities=9% Similarity=0.219 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHH
Q 024521 39 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (266)
Q Consensus 39 ~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~ 80 (266)
++|.+.+.|+-.+ |..+.|.+.|+|| .+-+.|.+
T Consensus 8 dIYDAvRaflLr~--Y~~KrfIV~g~S~------~IlhNIyr 41 (100)
T PF07389_consen 8 DIYDAVRAFLLRH--YYDKRFIVYGRSN------AILHNIYR 41 (100)
T ss_pred hHHHHHHHHHHHH--HccceEEEecchH------HHHHHHHH
Confidence 6788888888777 7788999999998 56665554
No 189
>COG3150 Predicted esterase [General function prediction only]
Probab=49.70 E-value=36 Score=27.28 Aligned_cols=39 Identities=13% Similarity=0.254 Sum_probs=28.6
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHH
Q 024521 32 GDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADV 77 (266)
Q Consensus 32 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~ 77 (266)
+..++++.+.+.+++ +.++..-|+|-|-||.|+-.|+..
T Consensus 41 ~p~~a~~ele~~i~~-------~~~~~p~ivGssLGGY~At~l~~~ 79 (191)
T COG3150 41 DPQQALKELEKAVQE-------LGDESPLIVGSSLGGYYATWLGFL 79 (191)
T ss_pred CHHHHHHHHHHHHHH-------cCCCCceEEeecchHHHHHHHHHH
Confidence 445666666666664 777779999999999777777664
No 190
>COG4425 Predicted membrane protein [Function unknown]
Probab=49.36 E-value=27 Score=32.36 Aligned_cols=37 Identities=24% Similarity=0.482 Sum_probs=30.8
Q ss_pred cHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCc
Q 024521 33 DASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGH 69 (266)
Q Consensus 33 ~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~ 69 (266)
-..+|+.+++.+-......|+-..-++|+.|||.|..
T Consensus 373 g~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 373 GADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred chhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 3567788888888888889988777899999998763
No 191
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=47.65 E-value=21 Score=31.59 Aligned_cols=67 Identities=19% Similarity=0.324 Sum_probs=35.5
Q ss_pred cceEEeeCCCCcc-cccccC----------CCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHH
Q 024521 7 SNLLFVESPAGVG-WSYSNT----------TSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLA 75 (266)
Q Consensus 7 an~l~iD~PvG~G-fS~~~~----------~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la 75 (266)
.-|+|-|+-|||| |-..-. ...+..+..+-...-|.||..-|+ -+-.+|++|.|=|...+-.||
T Consensus 66 ~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AYrFL~~~ye-----pGD~Iy~FGFSRGAf~aRVla 140 (423)
T COG3673 66 TQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAYRFLIFNYE-----PGDEIYAFGFSRGAFSARVLA 140 (423)
T ss_pred eEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcC-----CCCeEEEeeccchhHHHHHHH
Confidence 3488999988887 211100 001111222223334555554222 134699999999876555565
Q ss_pred HHH
Q 024521 76 DVL 78 (266)
Q Consensus 76 ~~i 78 (266)
--|
T Consensus 141 gmi 143 (423)
T COG3673 141 GMI 143 (423)
T ss_pred HHH
Confidence 544
No 192
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=47.09 E-value=28 Score=27.36 Aligned_cols=65 Identities=20% Similarity=0.280 Sum_probs=32.7
Q ss_pred CCcccccccCCCCC-CCCcHHHHHHHHHHHHHHHHhCC-CCCCCCeEEEeeCCCCc-----cHHHHHHHHHHh
Q 024521 16 AGVGWSYSNTTSDY-NCGDASTARDMHVFMMNWYEKFP-EFKSRELFLTGESYAGH-----YIPQLADVLLDH 81 (266)
Q Consensus 16 vG~GfS~~~~~~~~-~~~~~~~a~~~~~fl~~f~~~~p-~~~~~~~~i~GeSYgG~-----yvp~la~~i~~~ 81 (266)
||||-...+ ...+ -.+..+.|..+-.|-+.|-+.++ ......+.|+|+|.+.. ++-.|+..+.++
T Consensus 62 VGHG~~~~~-~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~~~~~~fa~~f~~~L~~~ 133 (157)
T PF11713_consen 62 VGHGRDEFN-NQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADNNKQESFALQFAQALKKQ 133 (157)
T ss_dssp E--EESSTS-SSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-TTGGGSHHHHHHHHHHHH
T ss_pred EEeCCCcCC-CceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCCcccccHHHHHHHHHHhc
Confidence 788854111 1111 13445666666555566666543 33445799999999987 444455555443
No 193
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=46.68 E-value=26 Score=28.09 Aligned_cols=56 Identities=21% Similarity=0.304 Sum_probs=36.6
Q ss_pred eeCCCCccc-ccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHH
Q 024521 12 VESPAGVGW-SYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADV 77 (266)
Q Consensus 12 iD~PvG~Gf-S~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~ 77 (266)
|+-|+..+. +|. .+....+.++.+.+++.....|+ .++.|+|.|-|+..+-..+..
T Consensus 45 V~YpA~~~~~~y~-------~S~~~G~~~~~~~i~~~~~~CP~---~kivl~GYSQGA~V~~~~~~~ 101 (179)
T PF01083_consen 45 VEYPASLGPNSYG-------DSVAAGVANLVRLIEEYAARCPN---TKIVLAGYSQGAMVVGDALSG 101 (179)
T ss_dssp --S---SCGGSCH-------HHHHHHHHHHHHHHHHHHHHSTT---SEEEEEEETHHHHHHHHHHHH
T ss_pred cCCCCCCCccccc-------ccHHHHHHHHHHHHHHHHHhCCC---CCEEEEecccccHHHHHHHHh
Confidence 556655554 222 24566678888999999999984 589999999999655544443
No 194
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=46.14 E-value=26 Score=31.83 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=26.4
Q ss_pred HHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHH
Q 024521 44 MMNWYEKFPEFKSRELFLTGESYAGHYIPQLAD 76 (266)
Q Consensus 44 l~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~ 76 (266)
..+|++..|+.....+-++|.|+||...-.+|.
T Consensus 213 ~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaA 245 (390)
T PF12715_consen 213 ALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAA 245 (390)
T ss_dssp HHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHH
T ss_pred HHHHHhcCcccCccceEEEeecccHHHHHHHHH
Confidence 457999999999999999999999976555554
No 195
>KOG3877 consensus NADH:ubiquinone oxidoreductase, NDUFA10/42kDa subunit [Energy production and conversion]
Probab=45.97 E-value=29 Score=30.15 Aligned_cols=49 Identities=24% Similarity=0.582 Sum_probs=35.0
Q ss_pred ccccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCc
Q 024521 4 NKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGH 69 (266)
Q Consensus 4 ~~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~ 69 (266)
++++-||-||-|+|+|-| ..|.++.+-|. |..||++.--.+|+ .|||+-
T Consensus 68 ~enSkvI~VeGnI~sGK~-------------klAKelAe~Lg--f~hfP~~~~d~iyv--dsyg~D 116 (393)
T KOG3877|consen 68 HENSKVIVVEGNIGSGKT-------------KLAKELAEQLG--FVHFPEFRMDDIYV--DSYGND 116 (393)
T ss_pred cccceEEEEeCCcccCch-------------hHHHHHHHHhC--Ccccccccccceee--cccCcc
Confidence 567789999999999944 33444444443 57799988777777 788874
No 196
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=45.13 E-value=49 Score=29.79 Aligned_cols=31 Identities=10% Similarity=0.186 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCcc
Q 024521 37 ARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHY 70 (266)
Q Consensus 37 a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~y 70 (266)
..++-++|+..-..-| ...+||..||||.-.
T Consensus 174 r~aLe~~lr~La~~~~---~~~I~ilAHSMGtwl 204 (377)
T COG4782 174 RPALERLLRYLATDKP---VKRIYLLAHSMGTWL 204 (377)
T ss_pred HHHHHHHHHHHHhCCC---CceEEEEEecchHHH
Confidence 3444455554333332 457999999999843
No 197
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=44.84 E-value=32 Score=29.54 Aligned_cols=31 Identities=19% Similarity=0.355 Sum_probs=19.7
Q ss_pred HHHHHHHH----HHHHh-CCCCCCCCeEEEeeCCCCc
Q 024521 38 RDMHVFMM----NWYEK-FPEFKSRELFLTGESYAGH 69 (266)
Q Consensus 38 ~~~~~fl~----~f~~~-~p~~~~~~~~i~GeSYgG~ 69 (266)
..+.+||. =|++. ++ .+..+-.|+|+||||-
T Consensus 114 ~~f~~fL~~~lkP~Ie~~y~-~~~~~~~i~GhSlGGL 149 (264)
T COG2819 114 DAFREFLTEQLKPFIEARYR-TNSERTAIIGHSLGGL 149 (264)
T ss_pred HHHHHHHHHhhHHHHhcccc-cCcccceeeeecchhH
Confidence 34445554 45554 43 3445699999999994
No 198
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=42.83 E-value=29 Score=29.92 Aligned_cols=45 Identities=22% Similarity=0.212 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHh-CCC---CCCCCeEEEeeCCCCccHHHHHHHHH
Q 024521 35 STARDMHVFMMNWYEK-FPE---FKSRELFLTGESYAGHYIPQLADVLL 79 (266)
Q Consensus 35 ~~a~~~~~fl~~f~~~-~p~---~~~~~~~i~GeSYgG~yvp~la~~i~ 79 (266)
+.+..+..+|.+=+.. .|+ =+-.++-|+|||-||+.+=++|....
T Consensus 94 ~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a 142 (307)
T PF07224_consen 94 KSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYA 142 (307)
T ss_pred HHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhccc
Confidence 4556666666554432 232 23356999999999998888887553
No 199
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=42.33 E-value=27 Score=31.20 Aligned_cols=32 Identities=31% Similarity=0.475 Sum_probs=24.2
Q ss_pred HHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHH
Q 024521 42 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLAD 76 (266)
Q Consensus 42 ~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~ 76 (266)
..|..|++.- .+. ++-|+|-||||+++...|.
T Consensus 163 ~~Ll~Wl~~~-G~~--~~g~~G~SmGG~~A~laa~ 194 (348)
T PF09752_consen 163 RALLHWLERE-GYG--PLGLTGISMGGHMAALAAS 194 (348)
T ss_pred HHHHHHHHhc-CCC--ceEEEEechhHhhHHhhhh
Confidence 4567777766 453 8999999999987765554
No 200
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=41.72 E-value=58 Score=29.19 Aligned_cols=39 Identities=15% Similarity=0.065 Sum_probs=28.4
Q ss_pred HHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHh
Q 024521 42 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 81 (266)
Q Consensus 42 ~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~ 81 (266)
..|-+.+....+ -.||+.|+|+|.|++.+-+-...+.++
T Consensus 206 ~~LA~~L~~~~~-G~RpVtLvG~SLGarvI~~cL~~L~~~ 244 (345)
T PF05277_consen 206 KVLADALLSRNQ-GERPVTLVGHSLGARVIYYCLLELAER 244 (345)
T ss_pred HHHHHHHHHhcC-CCCceEEEeecccHHHHHHHHHHHHhc
Confidence 444444444433 678999999999999888877777665
No 201
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=39.68 E-value=16 Score=30.39 Aligned_cols=36 Identities=11% Similarity=0.257 Sum_probs=22.2
Q ss_pred HHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHh
Q 024521 42 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 81 (266)
Q Consensus 42 ~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~ 81 (266)
.-|+.|++.--++.+.++-|+|+|+|| .+|++.++.
T Consensus 60 ~~l~~fI~~Vl~~TGakVDIVgHS~G~----~iaR~yi~~ 95 (219)
T PF01674_consen 60 KQLRAFIDAVLAYTGAKVDIVGHSMGG----TIARYYIKG 95 (219)
T ss_dssp HHHHHHHHHHHHHHT--EEEEEETCHH----HHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCEEEEEEcCCcC----HHHHHHHHH
Confidence 445555544324555599999999999 566665543
No 202
>PF12532 DUF3732: Protein of unknown function (DUF3732); InterPro: IPR022205 This domain family is found in bacteria and eukaryotes, and is typically between 180 and 198 amino acids in length. There is a conserved DQP sequence motif.
Probab=39.05 E-value=53 Score=26.77 Aligned_cols=45 Identities=16% Similarity=0.422 Sum_probs=29.5
Q ss_pred ccceEEeeCCCCcccccccCCC-----CC--CCCcHHHHHHHHHHHHHHHHh
Q 024521 6 ASNLLFVESPAGVGWSYSNTTS-----DY--NCGDASTARDMHVFMMNWYEK 50 (266)
Q Consensus 6 ~an~l~iD~PvG~GfS~~~~~~-----~~--~~~~~~~a~~~~~fl~~f~~~ 50 (266)
.-+.|+||||.-+=|......+ .. ..+|..+...++.+|.+|.+.
T Consensus 100 VP~fL~lDQPSQvYfp~~~~~~~~~~~~~~~~d~D~~aV~~~F~~L~~~~~~ 151 (193)
T PF12532_consen 100 VPSFLFLDQPSQVYFPSRDKSEDFDEEELRERDEDIAAVRKMFSLLADFIKE 151 (193)
T ss_pred CCCeeeecCCCcCcCCCcccccccchhhccccchHHHHHHHHHHHHHHHHHH
Confidence 4589999999888776611111 11 124455667888999998875
No 203
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=38.34 E-value=38 Score=27.15 Aligned_cols=43 Identities=21% Similarity=0.344 Sum_probs=31.0
Q ss_pred CcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccC
Q 024521 166 IPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMV 235 (266)
Q Consensus 166 i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~v 235 (266)
-|++|++|+.|.+++ .++.+.++|+.. +-..++..+.+++|-.
T Consensus 167 Pp~~i~~g~~D~l~~--~~~~~~~~L~~~-------------------------gv~v~~~~~~g~~H~f 209 (211)
T PF07859_consen 167 PPTLIIHGEDDVLVD--DSLRFAEKLKKA-------------------------GVDVELHVYPGMPHGF 209 (211)
T ss_dssp HEEEEEEETTSTTHH--HHHHHHHHHHHT-------------------------T-EEEEEEETTEETTG
T ss_pred CCeeeeccccccchH--HHHHHHHHHHHC-------------------------CCCEEEEEECCCeEEe
Confidence 479999999998874 556677776421 1127788999999964
No 204
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=37.73 E-value=52 Score=28.22 Aligned_cols=45 Identities=22% Similarity=0.230 Sum_probs=27.3
Q ss_pred cHHHHHHHHHHHHHHHH-hCCC---CCCCCeEEEeeCCCCccHHHHHHH
Q 024521 33 DASTARDMHVFMMNWYE-KFPE---FKSRELFLTGESYAGHYIPQLADV 77 (266)
Q Consensus 33 ~~~~a~~~~~fl~~f~~-~~p~---~~~~~~~i~GeSYgG~yvp~la~~ 77 (266)
+.+.+..+..||.+=++ ..|. ..-..+.|+|||=||+.+-.+|..
T Consensus 63 ~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~ 111 (259)
T PF12740_consen 63 EVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALG 111 (259)
T ss_pred hHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhh
Confidence 45556677777665222 2221 112359999999999866555553
No 205
>PF01555 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 This domain is found in DNA methylases. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. This family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases. N-4 cytosine-specific DNA methylases (2.1.1.113 from EC) [] are enzymes that specifically methylate the amino group at the C-4 position of cytosines in DNA. Such enzymes are found as components of type II restriction-modification systems in prokaryotes. Such enzymes recognise a specific sequence in DNA and methylate a cytosine in that sequence. By this action they protect DNA from cleavage by type II restriction enzymes that recognise the same sequence. N-6 adenine-specific DNA methylases (2.1.1.72 from EC) (A-Mtase) are enzymes that specifically methylate the amino group at the C-6 position of adenines in DNA. Such enzymes are found in the three existing types of bacterial restriction-modification systems (in type I system the A-Mtase is the product of the hsdM gene, and in type III it is the product of the mod gene). All of these enzymes recognise a specific sequence in DNA and methylate an adenine in that sequence.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2ZIF_A 2ZIE_A 2ZIG_A 1NW6_A 1NW8_A 1NW7_A 1NW5_A 1EG2_A 1BOO_A 1G60_B ....
Probab=37.37 E-value=33 Score=27.75 Aligned_cols=40 Identities=23% Similarity=0.576 Sum_probs=20.6
Q ss_pred ceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHh
Q 024521 8 NLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEK 50 (266)
Q Consensus 8 n~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~ 50 (266)
+++++|+|=++|..+.... ..++....++.++++..++..
T Consensus 2 dliitDPPY~~~~~~~~~~---~~~~~~~~~~y~~~~~~~~~~ 41 (231)
T PF01555_consen 2 DLIITDPPYNIGKDYNNYF---DYGDNKNHEEYLEWMEEWLKE 41 (231)
T ss_dssp EEEEE---TSSSCS--------CSCHCCHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcchhh---hccCCCCHHHHHHHHHHHHHH
Confidence 6899999999998852111 123333445666666666643
No 206
>PRK14566 triosephosphate isomerase; Provisional
Probab=37.09 E-value=78 Score=27.16 Aligned_cols=47 Identities=19% Similarity=0.383 Sum_probs=33.0
Q ss_pred cHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHhc
Q 024521 33 DASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHN 82 (266)
Q Consensus 33 ~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~~ 82 (266)
+.+.+++++.|+++++...-+-....+-|. |||-.-|.-+..|+...
T Consensus 187 t~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~ 233 (260)
T PRK14566 187 TPEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQP 233 (260)
T ss_pred CHHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcCC
Confidence 456688999999999875421212233333 99999999999987654
No 207
>PF04446 Thg1: tRNAHis guanylyltransferase; InterPro: IPR007537 The Thg1 protein from Saccharomyces cerevisiae (Baker's yeast) is responsible for adding a GMP residue to the 5' end of tRNA His [].; PDB: 3OTE_A 3OTC_A 3OTD_A 3OTB_A.
Probab=36.93 E-value=52 Score=25.20 Aligned_cols=50 Identities=18% Similarity=0.345 Sum_probs=34.6
Q ss_pred eEEeeCCCCcccccccCCCCC-CCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeC
Q 024521 9 LLFVESPAGVGWSYSNTTSDY-NCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGES 65 (266)
Q Consensus 9 ~l~iD~PvG~GfS~~~~~~~~-~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeS 65 (266)
||-|| |.||+.-+....+ ...|....+-|.+.-....+.+++ ..+..|+|
T Consensus 23 vvRiD---G~~F~kft~~~~f~KP~D~r~~~~M~~aa~~l~~~~~~----~~~aY~~S 73 (135)
T PF04446_consen 23 VVRID---GRGFHKFTKRHGFEKPNDERFLKAMNEAAKALMEEFPD----IVLAYGQS 73 (135)
T ss_dssp EEEEE---ETTHHHHHHHTT--SS--HHHHHHHHHHHHHHHHHSSS----EEEEEEET
T ss_pred EEEEe---CcchhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhCCC----cEEEEEcC
Confidence 57788 8999876554334 336888888888888888888873 56777776
No 208
>PRK07868 acyl-CoA synthetase; Validated
Probab=36.24 E-value=42 Score=34.59 Aligned_cols=21 Identities=33% Similarity=0.449 Sum_probs=17.3
Q ss_pred CCCeEEEeeCCCCccHHHHHH
Q 024521 56 SRELFLTGESYAGHYIPQLAD 76 (266)
Q Consensus 56 ~~~~~i~GeSYgG~yvp~la~ 76 (266)
..+++++|+|+||..+..+|.
T Consensus 140 ~~~v~lvG~s~GG~~a~~~aa 160 (994)
T PRK07868 140 GRDVHLVGYSQGGMFCYQAAA 160 (994)
T ss_pred CCceEEEEEChhHHHHHHHHH
Confidence 358999999999987766665
No 209
>PF08060 NOSIC: NOSIC (NUC001) domain; InterPro: IPR012976 This is the central domain in Nop56/SIK1-like proteins [].; PDB: 3PLA_K 3ICX_B 3ID6_A 3ID5_E 3NVM_A 3NMU_B 2NNW_C 3NVI_A 3NVK_A 2OZB_E ....
Probab=35.00 E-value=42 Score=21.03 Aligned_cols=21 Identities=29% Similarity=0.776 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHH-hCCCCC
Q 024521 35 STARDMHVFMMNWYE-KFPEFK 55 (266)
Q Consensus 35 ~~a~~~~~fl~~f~~-~~p~~~ 55 (266)
.....++.++++||. +|||+.
T Consensus 14 ~ei~~~~~~lre~Y~~~FPEL~ 35 (53)
T PF08060_consen 14 KEINLLHMRLREWYSWHFPELE 35 (53)
T ss_dssp HHHHHHHHHHHHHHTTTSTTHH
T ss_pred HHHHHHHHHHHHHHHccchhHH
Confidence 345567899999996 699974
No 210
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=34.95 E-value=92 Score=25.70 Aligned_cols=59 Identities=25% Similarity=0.372 Sum_probs=40.9
Q ss_pred CCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHHHH
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 244 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~~~ 244 (266)
..+++..+|+.|.+||+...+...+.+.. . +++.+|-...|-||.. -|++.-
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~-~------------------------~~~~~f~~y~g~~h~~---~~~e~~ 195 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKS-L------------------------GVRVTFKPYPGLGHST---SPQELD 195 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHH-c------------------------CCceeeeecCCccccc---cHHHHH
Confidence 57788999999999999998887777542 1 1226777778888876 445444
Q ss_pred HHHHHHhC
Q 024521 245 HLFSSFVH 252 (266)
Q Consensus 245 ~~i~~fl~ 252 (266)
++ ..|+.
T Consensus 196 ~~-~~~~~ 202 (206)
T KOG2112|consen 196 DL-KSWIK 202 (206)
T ss_pred HH-HHHHH
Confidence 43 33553
No 211
>COG4099 Predicted peptidase [General function prediction only]
Probab=34.82 E-value=71 Score=28.20 Aligned_cols=28 Identities=39% Similarity=0.816 Sum_probs=24.2
Q ss_pred CCcEEEEecCCccccCccchHHHHHHHH
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIRELA 192 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l~ 192 (266)
+.++.|+++..|.++|..++.-....++
T Consensus 315 ~~piWvfhs~dDkv~Pv~nSrv~y~~lk 342 (387)
T COG4099 315 KAPIWVFHSSDDKVIPVSNSRVLYERLK 342 (387)
T ss_pred cCceEEEEecCCCccccCcceeehHHHH
Confidence 7899999999999999999887666654
No 212
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=33.87 E-value=52 Score=29.68 Aligned_cols=24 Identities=21% Similarity=0.343 Sum_probs=18.9
Q ss_pred CCCCCCeEEEeeCCCCccHHHHHH
Q 024521 53 EFKSRELFLTGESYAGHYIPQLAD 76 (266)
Q Consensus 53 ~~~~~~~~i~GeSYgG~yvp~la~ 76 (266)
++...++-+.|+||||.-+-+++-
T Consensus 155 ~ld~~~Vgv~GhS~GG~T~m~laG 178 (365)
T COG4188 155 RLDPQRVGVLGHSFGGYTAMELAG 178 (365)
T ss_pred ccCccceEEEecccccHHHHHhcc
Confidence 445578999999999987777653
No 213
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=33.50 E-value=1.5e+02 Score=27.40 Aligned_cols=79 Identities=16% Similarity=0.207 Sum_probs=0.0
Q ss_pred hHHHHHHHHhCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcc
Q 024521 154 ILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAH 233 (266)
Q Consensus 154 ~~~~l~~Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH 233 (266)
+.++-.-|-+.+-|+|++.|+.| ||.-..=.-|. ...+ -..++++|+.|
T Consensus 340 m~dI~~Wvr~~~~rmlFVYG~nD----------------------------PW~A~~f~l~~--g~~d-s~v~~~PggnH 388 (448)
T PF05576_consen 340 MRDIDRWVRNNGPRMLFVYGEND----------------------------PWSAEPFRLGK--GKRD-SYVFTAPGGNH 388 (448)
T ss_pred HHHHHHHHHhCCCeEEEEeCCCC----------------------------CcccCccccCC--CCcc-eEEEEcCCCcc
Q ss_pred c-----CCccChHHHHHHHHHHhCCCCCCCCCCCC
Q 024521 234 M-----VPYAQPSRALHLFSSFVHGRRLPNNTRPA 263 (266)
Q Consensus 234 ~-----vp~dqP~~~~~~i~~fl~~~~~~~~~~~~ 263 (266)
. .|.++.+.|..+|++|-.-.+.....+|.
T Consensus 389 ga~I~~L~~~~r~~a~a~l~~WaGv~~~~~~~~~~ 423 (448)
T PF05576_consen 389 GARIAGLPEAERAEATARLRRWAGVAPAAVQADPS 423 (448)
T ss_pred cccccCCCHHHHHHHHHHHHHHcCCCccccccChh
No 214
>KOG2682 consensus NAD-dependent histone deacetylases and class I sirtuins (SIR2 family) [Chromatin structure and dynamics; Transcription]
Probab=33.45 E-value=21 Score=30.15 Aligned_cols=58 Identities=24% Similarity=0.485 Sum_probs=37.3
Q ss_pred CCcccccccCCCCCCCCcHHHHHHHHHHHH-------------HHHHhCCCCCCCCeE-EEeeCCCCccHHHHHHHHHHh
Q 024521 16 AGVGWSYSNTTSDYNCGDASTARDMHVFMM-------------NWYEKFPEFKSRELF-LTGESYAGHYIPQLADVLLDH 81 (266)
Q Consensus 16 vG~GfS~~~~~~~~~~~~~~~a~~~~~fl~-------------~f~~~~p~~~~~~~~-i~GeSYgG~yvp~la~~i~~~ 81 (266)
||.|-|+...-.++..-.+ .+|.-|+ .||.++| +||| ++-|=|-|.|-|.+.+++++-
T Consensus 43 VGAGISTsaGIPDFRSP~t----GlY~NLqr~~LPYpEAiFel~yF~~nP----~PF~tLAkELyPgnfkPt~~HYflrL 114 (314)
T KOG2682|consen 43 VGAGISTSAGIPDFRSPGT----GLYDNLQRYHLPYPEAIFELSYFKKNP----EPFFTLAKELYPGNFKPTITHYFLRL 114 (314)
T ss_pred ecCccccccCCCCCCCCCc----hhhhhHHHhcCCChhhhhccHHhhcCC----chHHHHHHHhCCCCcCchhHHHHHHH
Confidence 7999998754433421112 3344443 4555554 3665 788999999999999887653
No 215
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=33.37 E-value=81 Score=28.96 Aligned_cols=48 Identities=17% Similarity=0.337 Sum_probs=36.9
Q ss_pred CCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHH
Q 024521 30 NCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (266)
Q Consensus 30 ~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~ 80 (266)
.++.++.|.|+-+.++ ||... .+.+++-|.|.|+|.-..|..-+++..
T Consensus 302 ~rtPe~~a~Dl~r~i~-~y~~~--w~~~~~~liGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 302 ERTPEQIAADLSRLIR-FYARR--WGAKRVLLIGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred cCCHHHHHHHHHHHHH-HHHHh--hCcceEEEEeecccchhhHHHHHhCCH
Confidence 3577888989877665 55543 567899999999999999988776543
No 216
>PRK10949 protease 4; Provisional
Probab=31.73 E-value=33 Score=33.31 Aligned_cols=50 Identities=14% Similarity=0.355 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEeeCCC--CccHHHHHHHHHHhcccCCCceeeechhh
Q 024521 38 RDMHVFMMNWYEKFPEFKSRELFLTGESYA--GHYIPQLADVLLDHNAHSKGFKFNIKGVA 96 (266)
Q Consensus 38 ~~~~~fl~~f~~~~p~~~~~~~~i~GeSYg--G~yvp~la~~i~~~~~~~~~~~~nl~Gi~ 96 (266)
+.+.+.|.+|=+ .++|++-+|++|+ |.|+.+.|.+|.-.... .+.+.|+.
T Consensus 132 ~eI~~ai~~fk~-----sGKpVvA~~~~~~s~~YyLASaAD~I~l~P~G----~v~~~G~~ 183 (618)
T PRK10949 132 QYIGKALREFRD-----SGKPVYAVGDSYSQGQYYLASFANKIYLSPQG----VVDLHGFA 183 (618)
T ss_pred HHHHHHHHHHHH-----hCCeEEEEecCccchhhhhhhhCCEEEECCCc----eEEEeeee
Confidence 466777777543 2578999999886 77888888877654321 35555655
No 217
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=30.67 E-value=1.4e+02 Score=26.23 Aligned_cols=24 Identities=25% Similarity=0.364 Sum_probs=17.9
Q ss_pred CCCCCeEEEeeCCCCccHHHHHHH
Q 024521 54 FKSRELFLTGESYAGHYIPQLADV 77 (266)
Q Consensus 54 ~~~~~~~i~GeSYgG~yvp~la~~ 77 (266)
.....+||+|.|-||.++-.|+..
T Consensus 141 idp~RVyvtGlS~GG~Ma~~lac~ 164 (312)
T COG3509 141 IDPARVYVTGLSNGGRMANRLACE 164 (312)
T ss_pred cCcceEEEEeeCcHHHHHHHHHhc
Confidence 344579999999999766665553
No 218
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=29.26 E-value=1.1e+02 Score=25.59 Aligned_cols=25 Identities=24% Similarity=0.478 Sum_probs=17.2
Q ss_pred CCCCCeEEEeeCCCCccHHHHHHHH
Q 024521 54 FKSRELFLTGESYAGHYIPQLADVL 78 (266)
Q Consensus 54 ~~~~~~~i~GeSYgG~yvp~la~~i 78 (266)
.+...+|++-+||||.....+..+.
T Consensus 187 a~~~sv~vvahsyGG~~t~~l~~~f 211 (297)
T KOG3967|consen 187 AKAESVFVVAHSYGGSLTLDLVERF 211 (297)
T ss_pred cCcceEEEEEeccCChhHHHHHHhc
Confidence 3456799999999995444444433
No 219
>PF14020 DUF4236: Protein of unknown function (DUF4236)
Probab=29.13 E-value=35 Score=21.72 Aligned_cols=15 Identities=40% Similarity=0.563 Sum_probs=12.3
Q ss_pred ceEEeeCCCCcccccc
Q 024521 8 NLLFVESPAGVGWSYS 23 (266)
Q Consensus 8 n~l~iD~PvG~GfS~~ 23 (266)
--+.++.| |+|+||.
T Consensus 40 ~~~t~~iP-GtGlsyr 54 (55)
T PF14020_consen 40 RRTTVGIP-GTGLSYR 54 (55)
T ss_pred cEEEEEcC-CCccEEe
Confidence 34778999 9999985
No 220
>COG0218 Predicted GTPase [General function prediction only]
Probab=28.73 E-value=96 Score=25.49 Aligned_cols=36 Identities=19% Similarity=0.392 Sum_probs=20.0
Q ss_pred eEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCC
Q 024521 9 LLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEF 54 (266)
Q Consensus 9 ~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~ 54 (266)
+.+||.| |=||.-+ + .+.-+..-..+.++++..-++
T Consensus 72 ~~lVDlP-GYGyAkv--~-------k~~~e~w~~~i~~YL~~R~~L 107 (200)
T COG0218 72 LRLVDLP-GYGYAKV--P-------KEVKEKWKKLIEEYLEKRANL 107 (200)
T ss_pred EEEEeCC-CcccccC--C-------HHHHHHHHHHHHHHHhhchhh
Confidence 7899999 5555433 2 233334445556655554433
No 221
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=28.09 E-value=24 Score=32.01 Aligned_cols=30 Identities=23% Similarity=0.372 Sum_probs=16.9
Q ss_pred eEEEEEcCCcccCCccChHHHHHHHHHHhC
Q 024521 223 LTFVTVRGAAHMVPYAQPSRALHLFSSFVH 252 (266)
Q Consensus 223 ltf~~V~~AGH~vp~dqP~~~~~~i~~fl~ 252 (266)
-.+++|.|++|+-.-|=|--.=.++.+++.
T Consensus 304 ~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~ 333 (379)
T PF03403_consen 304 SRMLTIKGTAHLSFSDFPLLSPWLLGKFLG 333 (379)
T ss_dssp EEEEEETT--GGGGSGGGGTS-HHHHHHTT
T ss_pred cEEEEECCCcCCCcchhhhhhHHHHHHHhc
Confidence 456788888888776665544445555543
No 222
>PRK14567 triosephosphate isomerase; Provisional
Probab=27.35 E-value=1.4e+02 Score=25.44 Aligned_cols=47 Identities=17% Similarity=0.277 Sum_probs=32.6
Q ss_pred cHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHhc
Q 024521 33 DASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHN 82 (266)
Q Consensus 33 ~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~~ 82 (266)
+.+.+++++.++++++..+-+-....+-|. |||-.-|.=+..+++..
T Consensus 177 s~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~~ 223 (253)
T PRK14567 177 SLEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSLP 223 (253)
T ss_pred CHHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcCC
Confidence 467788999999999876522112233333 99998999888887653
No 223
>PF10929 DUF2811: Protein of unknown function (DUF2811); InterPro: IPR021231 This is a bacterial family of uncharacterised proteins.
Probab=26.88 E-value=71 Score=20.50 Aligned_cols=22 Identities=23% Similarity=0.522 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCC
Q 024521 35 STARDMHVFMMNWYEKFPEFKS 56 (266)
Q Consensus 35 ~~a~~~~~fl~~f~~~~p~~~~ 56 (266)
+.-++++..|++|++.||+.--
T Consensus 5 eiPe~L~~~m~~fie~hP~WDQ 26 (57)
T PF10929_consen 5 EIPEDLHQAMKDFIETHPNWDQ 26 (57)
T ss_pred cccHHHHHHHHHHHHcCCCchH
Confidence 3457899999999999998743
No 224
>TIGR00190 thiC thiamine biosynthesis protein ThiC. The thiC ortholog is designated thiA in Bacillus subtilis.
Probab=26.68 E-value=59 Score=29.69 Aligned_cols=31 Identities=19% Similarity=0.308 Sum_probs=28.3
Q ss_pred EEEEcCCcccCCccChHHHHHHHHHHhCCCCC
Q 024521 225 FVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 256 (266)
Q Consensus 225 f~~V~~AGH~vp~dqP~~~~~~i~~fl~~~~~ 256 (266)
.+.|.|.||+ |++|=+.-.++.++..++.||
T Consensus 258 QvMVEGPGHv-Pl~~I~~nv~lqK~lc~~APf 288 (423)
T TIGR00190 258 QCMVEGPGHV-PLDQIEANVRLQKELCDEAPF 288 (423)
T ss_pred eEEEECCCCC-cHHHHHHHHHHHHHhhCCCCe
Confidence 4789999998 999999999999999998876
No 225
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=25.91 E-value=4.4e+02 Score=22.92 Aligned_cols=44 Identities=20% Similarity=0.259 Sum_probs=26.0
Q ss_pred HHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHhcccCCCceeeechhh
Q 024521 46 NWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVA 96 (266)
Q Consensus 46 ~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~~~~~~~~~~nl~Gi~ 96 (266)
+-....|++ .+-++|+|+|-|| .+|+.+.+..... +-.|+-+++
T Consensus 82 e~v~~m~~l-sqGynivg~SQGg----lv~Raliq~cd~p--pV~n~ISL~ 125 (296)
T KOG2541|consen 82 EKVKQMPEL-SQGYNIVGYSQGG----LVARALIQFCDNP--PVKNFISLG 125 (296)
T ss_pred HHHhcchhc-cCceEEEEEcccc----HHHHHHHHhCCCC--CcceeEecc
Confidence 334456666 4579999999999 4555555443321 133555554
No 226
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=25.86 E-value=1.2e+02 Score=29.49 Aligned_cols=72 Identities=28% Similarity=0.478 Sum_probs=44.7
Q ss_pred CCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCc------c
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPY------A 238 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~------d 238 (266)
|.|.+|.+|..|-++|.--+-+---.|... +.|- ... |+|+.|.+|=|+=.+ +
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~-----------------~eG~---~s~-lrYyeV~naqHfDaf~~~pG~~ 613 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLNRQ-----------------VEGR---ASR-LRYYEVTNAQHFDAFLDFPGFD 613 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHhhh-----------------hccc---ccc-eeEEEecCCeechhhccCCCCC
Confidence 679999999999999866543321111100 0000 123 999999999887322 1
Q ss_pred C---h-----HHHHHHHHHHh-CCCCCC
Q 024521 239 Q---P-----SRALHLFSSFV-HGRRLP 257 (266)
Q Consensus 239 q---P-----~~~~~~i~~fl-~~~~~~ 257 (266)
. | .+|++++-.+| .|.+||
T Consensus 614 ~r~VPlh~Y~~qALd~M~a~L~~G~~LP 641 (690)
T PF10605_consen 614 TRFVPLHPYFFQALDLMWAHLKSGAALP 641 (690)
T ss_pred cccccccHHHHHHHHHHHHHhhcCCCCC
Confidence 1 1 56777777777 467776
No 227
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=25.74 E-value=28 Score=20.76 Aligned_cols=16 Identities=31% Similarity=0.289 Sum_probs=12.8
Q ss_pred hhhcCcHHHHHHhCCC
Q 024521 113 FFYLNLPEVQKALHAN 128 (266)
Q Consensus 113 ~~yln~~~V~~aL~v~ 128 (266)
-.-+++|+||.+|++-
T Consensus 17 ~~~l~DpdvqrgL~~l 32 (42)
T PF07849_consen 17 LRALRDPDVQRGLGFL 32 (42)
T ss_pred HHHHcCHHHHHHHHHH
Confidence 4568999999999763
No 228
>KOG1424 consensus Predicted GTP-binding protein MMR1 [General function prediction only]
Probab=25.63 E-value=55 Score=30.90 Aligned_cols=23 Identities=17% Similarity=0.388 Sum_probs=20.2
Q ss_pred CcccCCccChHHHHHHHHHHhCCC
Q 024521 231 AAHMVPYAQPSRALHLFSSFVHGR 254 (266)
Q Consensus 231 AGH~vp~dqP~~~~~~i~~fl~~~ 254 (266)
|-|-.| |++.+|-.|++.+++|+
T Consensus 446 ts~~~~-D~~RAAr~ILKDyv~GK 468 (562)
T KOG1424|consen 446 TSKGLP-DEYRAARYILKDYVSGK 468 (562)
T ss_pred hhccCC-cchHHHHHHHHHHhCCe
Confidence 445567 99999999999999999
No 229
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=25.32 E-value=1.4e+02 Score=25.77 Aligned_cols=73 Identities=18% Similarity=0.130 Sum_probs=48.1
Q ss_pred hCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCccChHH
Q 024521 163 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 242 (266)
Q Consensus 163 ~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~dqP~~ 242 (266)
..++.||++.||+|.-.++.|+--|..++....-+..+. ++|. =+.+.=..|-|.-..+.|..
T Consensus 214 ~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~---------------ksy~--e~~~~Gk~a~Hs~lhen~~v 276 (288)
T COG4814 214 SPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNG---------------KSYI--ESLYKGKDARHSKLHENPTV 276 (288)
T ss_pred CCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCc---------------ceeE--EEeeeCCcchhhccCCChhH
Confidence 347899999999999999999999999875322221110 0111 01122345889988899988
Q ss_pred HHHHHHHHhCC
Q 024521 243 ALHLFSSFVHG 253 (266)
Q Consensus 243 ~~~~i~~fl~~ 253 (266)
+..+.. ||-+
T Consensus 277 ~~yv~~-FLw~ 286 (288)
T COG4814 277 AKYVKN-FLWE 286 (288)
T ss_pred HHHHHH-Hhhc
Confidence 776554 7754
No 230
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=25.08 E-value=2.6e+02 Score=24.05 Aligned_cols=186 Identities=15% Similarity=0.169 Sum_probs=75.1
Q ss_pred cccceEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHHhccc
Q 024521 5 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH 84 (266)
Q Consensus 5 ~~an~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~~~~~ 84 (266)
+..+||--|.--=+|.|.++..+ -.....++-+..+.+|+..++ .+.+-|.--|-+|+.+-..|..+. .
T Consensus 56 NGFhViRyDsl~HvGlSsG~I~e----ftms~g~~sL~~V~dwl~~~g---~~~~GLIAaSLSaRIAy~Va~~i~----l 124 (294)
T PF02273_consen 56 NGFHVIRYDSLNHVGLSSGDINE----FTMSIGKASLLTVIDWLATRG---IRRIGLIAASLSARIAYEVAADIN----L 124 (294)
T ss_dssp TT--EEEE---B-----------------HHHHHHHHHHHHHHHHHTT------EEEEEETTHHHHHHHHTTTS------
T ss_pred CCeEEEeccccccccCCCCChhh----cchHHhHHHHHHHHHHHHhcC---CCcchhhhhhhhHHHHHHHhhccC----c
Confidence 34577777877778888876432 122333444444556666554 345888888888865555554331 0
Q ss_pred CCCceeeechhhccccccCcCCCchhhhhhhcCcHHHHHHhCCCCC-----CCCC--CCcccc--cccc--ccCCCCCCC
Q 024521 85 SKGFKFNIKGVAATKMSVGVDVCMTLERFFYLNLPEVQKALHANRT-----NLPY--GWSMCS--GVLN--YSDTDSNIN 153 (266)
Q Consensus 85 ~~~~~~nl~Gi~~~~~~~~~~~c~~~~~~~yln~~~V~~aL~v~~~-----~~~~--~~~~~~--~~v~--~~~~d~~~~ 153 (266)
..-+...|++.- +...+++++.+-. ..|. .+...+ ..++ ......+.+
T Consensus 125 --sfLitaVGVVnl-------------------r~TLe~al~~Dyl~~~i~~lp~dldfeGh~l~~~vFv~dc~e~~w~~ 183 (294)
T PF02273_consen 125 --SFLITAVGVVNL-------------------RDTLEKALGYDYLQLPIEQLPEDLDFEGHNLGAEVFVTDCFEHGWDD 183 (294)
T ss_dssp --SEEEEES--S-H-------------------HHHHHHHHSS-GGGS-GGG--SEEEETTEEEEHHHHHHHHHHTT-SS
T ss_pred --ceEEEEeeeeeH-------------------HHHHHHHhccchhhcchhhCCCcccccccccchHHHHHHHHHcCCcc
Confidence 122334455310 1111222211110 0000 111111 0000 001111123
Q ss_pred hHHHHHHHHhCCCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcc
Q 024521 154 ILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAH 233 (266)
Q Consensus 154 ~~~~l~~Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH 233 (266)
....+..+-..++|++.++++.|..|--...+..+.++. .++...+.+.||+|
T Consensus 184 l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~---------------------------s~~~klysl~Gs~H 236 (294)
T PF02273_consen 184 LDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNIN---------------------------SNKCKLYSLPGSSH 236 (294)
T ss_dssp HHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-T---------------------------T--EEEEEETT-SS
T ss_pred chhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcC---------------------------CCceeEEEecCccc
Confidence 333444443348999999999998777666666666532 11166699999999
Q ss_pred cCCccChHHHHHHHHHH
Q 024521 234 MVPYAQPSRALHLFSSF 250 (266)
Q Consensus 234 ~vp~dqP~~~~~~i~~f 250 (266)
-. .+.|..+-.+.+..
T Consensus 237 dL-~enl~vlrnfy~sv 252 (294)
T PF02273_consen 237 DL-GENLVVLRNFYQSV 252 (294)
T ss_dssp -T-TSSHHHHHHHHHHH
T ss_pred hh-hhChHHHHHHHHHH
Confidence 98 45777766666554
No 231
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=24.31 E-value=2.9e+02 Score=22.12 Aligned_cols=51 Identities=10% Similarity=0.234 Sum_probs=30.1
Q ss_pred eEEeeCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeC
Q 024521 9 LLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGES 65 (266)
Q Consensus 9 ~l~iD~PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeS 65 (266)
+|.|| | |||-+..-.....-..+.+...++...|...++.. +..++++-+.
T Consensus 2 ~I~iD-p-GHGg~d~GA~~~~g~~E~~~~l~ia~~l~~~L~~~----G~~V~ltr~~ 52 (189)
T TIGR02883 2 IIVID-P-GHGGIDGGAVGKDGTLEKDITLEIALKLKDYLQEQ----GALVVMTRED 52 (189)
T ss_pred EEEEe-C-CCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhC----CCEEEEEecC
Confidence 58899 5 99954311111011245667777777788777764 4567776554
No 232
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=23.89 E-value=70 Score=25.75 Aligned_cols=58 Identities=17% Similarity=0.237 Sum_probs=41.0
Q ss_pred CCcEEEEecCCccccCccchHHHHHHHHhcccccccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCCcc---ChH
Q 024521 165 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYA---QPS 241 (266)
Q Consensus 165 ~i~VLiy~G~~D~iv~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~ltf~~V~~AGH~vp~d---qP~ 241 (266)
-.|.+++....|..|++.-++.+.+.. + -.++.+-.+||.--.+ -=.
T Consensus 117 pfps~vvaSrnDp~~~~~~a~~~a~~w----------------------------g--s~lv~~g~~GHiN~~sG~g~wp 166 (181)
T COG3545 117 PFPSVVVASRNDPYVSYEHAEDLANAW----------------------------G--SALVDVGEGGHINAESGFGPWP 166 (181)
T ss_pred CCceeEEEecCCCCCCHHHHHHHHHhc----------------------------c--HhheecccccccchhhcCCCcH
Confidence 478999999999999999999888882 2 2237777888875322 224
Q ss_pred HHHHHHHHHhC
Q 024521 242 RALHLFSSFVH 252 (266)
Q Consensus 242 ~~~~~i~~fl~ 252 (266)
+.+.++.+|+.
T Consensus 167 eg~~~l~~~~s 177 (181)
T COG3545 167 EGYALLAQLLS 177 (181)
T ss_pred HHHHHHHHHhh
Confidence 45566666654
No 233
>PRK10162 acetyl esterase; Provisional
Probab=23.75 E-value=2.8e+02 Score=24.15 Aligned_cols=41 Identities=15% Similarity=0.150 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCeEEEeeCCCCccHHHHHHHHHH
Q 024521 39 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 80 (266)
Q Consensus 39 ~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~la~~i~~ 80 (266)
+.++++.+.-+.+ .....++.|+|+|+||..+..+|....+
T Consensus 137 ~a~~~l~~~~~~~-~~d~~~i~l~G~SaGG~la~~~a~~~~~ 177 (318)
T PRK10162 137 AVCCYFHQHAEDY-GINMSRIGFAGDSAGAMLALASALWLRD 177 (318)
T ss_pred HHHHHHHHhHHHh-CCChhHEEEEEECHHHHHHHHHHHHHHh
Confidence 3444454433333 2334679999999999998888876644
No 234
>TIGR02679 conserved hypothetical protein TIGR02679. Members of this protein belong to a conserved gene four-gene neighborhood found sporadically in a phylogenetically broad range of bacteria: Nocardia farcinica, Symbiobacterium thermophilum, and Streptomyces avermitilis (Actinobacteria), Geobacillus kaustophilus (Firmicutes), Azoarcus sp. EbN1 and Ralstonia solanacearum (Betaproteobacteria).
Probab=22.70 E-value=1.5e+02 Score=26.99 Aligned_cols=32 Identities=19% Similarity=0.336 Sum_probs=22.6
Q ss_pred HHHHHHHHhCCCcEEEEecCCccccCccchHHHHHHHH
Q 024521 155 LPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELA 192 (266)
Q Consensus 155 ~~~l~~Ll~~~i~VLiy~G~~D~iv~~~g~~~~i~~l~ 192 (266)
...+..|...|.++ .|+||.| .+.....+.|.
T Consensus 288 ~~LL~~L~~~g~~l-~YhGDfD-----~~Gi~Ia~~L~ 319 (385)
T TIGR02679 288 IKLLDLLAAAGARL-YYHGDFD-----WPGLRIANGLI 319 (385)
T ss_pred HHHHHHHHhcCCeE-EEecCCC-----hhHHHHHHHHH
Confidence 45677777778776 9999999 35555556654
No 235
>COG4569 MhpF Acetaldehyde dehydrogenase (acetylating) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=22.25 E-value=81 Score=26.09 Aligned_cols=26 Identities=27% Similarity=0.351 Sum_probs=19.6
Q ss_pred eeEEEEeCCeeEEEEEcCCcccCCccC
Q 024521 213 GGWGTEYGNLLTFVTVRGAAHMVPYAQ 239 (266)
Q Consensus 213 ~G~~~~~~~~ltf~~V~~AGH~vp~dq 239 (266)
.|.++..+. -+|+.|.||||..|.+.
T Consensus 257 ~~~v~glkt-~~~lev~ga~~ylp~ya 282 (310)
T COG4569 257 VGQVSGLKT-AVWLEVEGAAHYLPAYA 282 (310)
T ss_pred ceeeeccce-EEEEEEecccccCcccc
Confidence 344554455 78999999999999765
No 236
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=22.17 E-value=2.5e+02 Score=24.25 Aligned_cols=25 Identities=20% Similarity=0.323 Sum_probs=18.4
Q ss_pred CCCCCeEEEeeCCCCccHHHHHHHHHHh
Q 024521 54 FKSRELFLTGESYAGHYIPQLADVLLDH 81 (266)
Q Consensus 54 ~~~~~~~i~GeSYgG~yvp~la~~i~~~ 81 (266)
|.-..+-.+|+|+||- .+++++.+.
T Consensus 133 Y~i~k~n~VGhSmGg~---~~~~Y~~~y 157 (288)
T COG4814 133 YNIPKFNAVGHSMGGL---GLTYYMIDY 157 (288)
T ss_pred cCCceeeeeeeccccH---HHHHHHHHh
Confidence 5556799999999995 555555544
Done!