Query 024528
Match_columns 266
No_of_seqs 156 out of 1191
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 09:51:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024528.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024528hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pw6_A Uncharacterized protein 100.0 5E-72 1.7E-76 498.9 18.2 255 3-263 13-271 (271)
2 1b4u_B LIGA, LIGB, protocatech 100.0 9.4E-48 3.2E-52 347.6 17.1 229 1-245 1-260 (302)
3 3vsj_B 2-amino-5-chlorophenol 100.0 1.2E-47 4E-52 348.4 15.7 239 2-246 3-274 (312)
4 3vsj_A 2-amino-5-chlorophenol 100.0 2.8E-46 9.7E-51 333.2 19.3 235 4-246 3-254 (271)
5 3bcz_A Protein MEMO1; alpha/be 99.8 5.3E-19 1.8E-23 158.8 10.8 177 38-238 64-253 (293)
6 2gfq_A UPF0204 protein PH0006; 76.0 21 0.0007 31.4 10.2 115 38-172 90-221 (298)
7 1yqe_A Hypothetical UPF0204 pr 74.8 38 0.0013 29.4 11.6 114 40-173 70-199 (282)
8 2odf_A AGR_C_3887P, hypothetic 65.7 6.9 0.00024 33.6 4.7 70 86-157 175-247 (257)
9 4dik_A Flavoprotein; TM0755, e 60.4 75 0.0026 28.8 11.0 77 89-171 281-364 (410)
10 2q7s_A N-formylglutamate amido 60.2 8.7 0.0003 33.6 4.4 54 83-140 200-253 (290)
11 2q5c_A NTRC family transcripti 55.0 10 0.00036 30.9 3.8 68 91-175 41-110 (196)
12 2pju_A Propionate catabolism o 51.7 16 0.00054 30.7 4.4 45 124-175 76-122 (225)
13 1o51_A Hypothetical protein TM 47.6 78 0.0027 23.4 7.3 75 88-165 29-105 (114)
14 1wn9_A The hypothetical protei 40.1 30 0.001 26.2 3.9 69 26-103 11-86 (131)
15 1bvy_F Protein (cytochrome P45 39.0 58 0.002 26.1 5.9 74 88-172 36-116 (191)
16 3qe2_A CPR, P450R, NADPH--cyto 37.6 65 0.0022 30.9 6.9 81 87-172 32-119 (618)
17 2dcl_A Hypothetical UPF0166 pr 37.1 71 0.0024 24.1 5.7 77 87-167 24-103 (127)
18 3f6r_A Flavodoxin; FMN binding 33.7 1.4E+02 0.0046 22.0 7.0 76 88-172 16-98 (148)
19 3m20_A 4-oxalocrotonate tautom 32.0 51 0.0018 21.0 3.7 25 132-157 1-25 (62)
20 3giu_A Pyrrolidone-carboxylate 31.9 2E+02 0.007 23.6 8.2 110 26-140 48-171 (215)
21 3ro0_A Pyrrolidone-carboxylate 30.9 2.3E+02 0.0077 23.5 8.4 80 27-111 49-138 (223)
22 5nul_A Flavodoxin; electron tr 26.7 1.4E+02 0.005 21.6 6.0 74 88-171 13-91 (138)
23 4hps_A Pyrrolidone-carboxylate 25.8 1.8E+02 0.0061 24.2 6.8 28 27-54 70-97 (228)
24 3egc_A Putative ribose operon 25.2 2.3E+02 0.008 22.9 7.7 79 84-167 46-133 (291)
25 1pjq_A CYSG, siroheme synthase 25.2 1E+02 0.0035 28.2 5.8 70 80-158 75-147 (457)
26 3jy6_A Transcriptional regulat 24.8 2.2E+02 0.0077 22.9 7.4 77 87-169 48-133 (276)
27 2xws_A Sirohydrochlorin cobalt 24.1 83 0.0029 23.0 4.1 31 5-41 4-34 (133)
28 3tb6_A Arabinose metabolism tr 23.2 2.7E+02 0.0092 22.4 7.7 82 83-167 52-145 (298)
29 3hr4_A Nitric oxide synthase, 22.8 2.7E+02 0.0094 22.8 7.4 74 87-172 54-135 (219)
30 3lyh_A Cobalamin (vitamin B12) 22.7 90 0.0031 22.8 4.0 32 1-38 2-33 (126)
31 3rot_A ABC sugar transporter, 22.7 1E+02 0.0034 25.5 4.8 77 87-166 46-137 (297)
32 4gxh_A Pyrrolidone-carboxylate 21.7 1.4E+02 0.005 24.5 5.5 104 27-139 49-170 (216)
33 1tjn_A Sirohydrochlorin cobalt 21.0 1E+02 0.0035 23.7 4.2 31 5-41 25-55 (156)
34 2x4k_A 4-oxalocrotonate tautom 20.6 84 0.0029 19.3 3.1 27 131-157 3-29 (63)
35 1x10_A Pyrrolidone-carboxylate 20.1 2.9E+02 0.01 22.4 7.0 28 27-54 47-74 (208)
No 1
>2pw6_A Uncharacterized protein YGID; JW3007, escherichia coli structural genomics, protein structure, riken and PSI, protein structu initiative; 2.27A {Escherichia coli} SCOP: c.56.6.1
Probab=100.00 E-value=5e-72 Score=498.91 Aligned_cols=255 Identities=33% Similarity=0.631 Sum_probs=223.2
Q ss_pred CcceEEEEcCCCCCCCCCCCchHHHHHHHHHHHhhcCCCCEEEEEeCCCCCCCCeEEeccCCCcccCCCCCccccccccC
Q 024528 3 TVKNTFFISHGSPTLSIDESLPARHFLKAWKEQVFTQRPNSILVISGHWETDVPTVNVVQQNDVIYDFYNFPEQMYKLKY 82 (266)
Q Consensus 3 ~~~~~~fisHg~P~~~~~~~~~~~~~~~~l~~~i~~~~Pd~IvviS~Hw~~~~~~i~~~~~~~~~~Df~gfp~~~y~~~y 82 (266)
.++|++|+|||+|++.+++ +.+.++++++++++. +||+||||||||++...+|+++++++++|||+|||+++|+++|
T Consensus 13 ~~~P~~flsHGsP~~~~~~-~~~~~~l~~l~~~l~--~P~aIvviSaHw~~~~~~V~~~~~~~~i~Df~gfp~~ly~~~y 89 (271)
T 2pw6_A 13 TRMPALFLGHGSPMNVLED-NLYTRSWQKLGMTLP--RPQAIVVVSAHWFTRGTGVTAMETPPTIHDFGGFPQALYDTHY 89 (271)
T ss_dssp -CCCEEEEECC-CCCCSSC-CHHHHHHHHHHHHSC--CCSEEEEEEEEEEESSEEEECCCC-------------CCSCCC
T ss_pred CcCCEEEECCCCCccCCCc-hHHHHHHHHHHHhCC--CCCEEEEEcCCCCCCceEEEeCCCCCCcCCcCcCCCcCccccc
Confidence 3689999999999988854 578899999999985 9999999999999999999999899999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCcccccCCCCccccchhhhhhhccCCCCCeEEEEecCCCChHHHHHHHHHhccccCCCe
Q 024528 83 PAPGAPELAKRVKQLLTESGFNHVNEDTKRGLDHGAWVPLMLMYPEANIPVCQLSVQTRKDGTHHYNMGKALAPLKDEGV 162 (266)
Q Consensus 83 ~~~g~~eLa~~i~~~l~~~g~d~~~~~~~~~lDHG~~vPL~~l~p~~~iPvV~vs~~~~~~~~~~~~lG~aL~~~~d~~v 162 (266)
+++|+++||++|++.+.++||+ +.. .++++|||+||||++|+|++|+||||||+|...++++||+||++|+++||+||
T Consensus 90 ~~~g~peLA~~i~~~l~~~g~~-~~~-~~~glDHG~~vPL~~m~p~adiPVVqlSi~~~~~p~~~~~lG~aL~~lrd~~V 167 (271)
T 2pw6_A 90 PAPGSPALAQRLVELLAPIPVT-LDK-EAWGFDHGSWGVLIKMYPDADIPMVQLSIDSSKPAAWHFEMGRKLAALRDEGI 167 (271)
T ss_dssp CCCBCHHHHHHHHHHHTTSCEE-EES-SCCCCCHHHHHHHHHHSTTCCSCEEEEEEETTSCHHHHHHHHHHHGGGGGGTE
T ss_pred CCCCCHHHHHHHHHHHHhcCCc-ccc-cccCCCcchhhhHHHhcCCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCc
Confidence 9999999999999999999995 554 78999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCccccccccCCC-CCcchhHHHHHHHHHHHHH-cC--CHhHHhcchhcCchhhhcCCCcCcHHHHHHHHccCC
Q 024528 163 LIIGSGSATHNLRALQFDG-DSVASWASEFDNWLKDALL-QG--RYEDVNHYEQKAPCAKKAHPWPDHFYPLHVAMGAAG 238 (266)
Q Consensus 163 ~iiaSG~lSH~l~~~~~~~-~~~~~~~~eFD~~v~~~l~-~g--d~~~l~~~~~~~p~~~~a~p~~~h~~pl~~~lGa~~ 238 (266)
+|||||++||||+..++.+ .+..+|+.+||+|++++|+ +| |.++|+++.. .|.++.+||+.|||+||++++||++
T Consensus 168 lIigSG~lsHnL~~~~~~~~~~~~~~~~eFD~~~~~~l~~~g~~d~~~L~~~~~-~~~a~~a~p~~eh~~pl~~alGa~~ 246 (271)
T 2pw6_A 168 MLVASGNVVHNLRTVKWHGDSSPYPWATSFNEYVKANLTWQGPVEQHPLVNYLD-HEGGTLSNPTPEHYLPLLYVLGAWD 246 (271)
T ss_dssp EEEEEECSSCCTTSCCSSSCCCCCHHHHHHHHHHHTTTTCCSCGGGCTTTSGGG-STTHHHHCSSSTTTHHHHHHHHTCC
T ss_pred EEEEeCccccCCCcccccCcCCCCchHHHHHHHHHHHHHhcCCcCHHHHhCccc-ChhHHHhCCchHhHHHHHHHHhCCC
Confidence 9999999999999987642 2456899999999999999 99 9999999965 4999999999999999999999998
Q ss_pred CCCceEEecceeeeceeeeeEEEEc
Q 024528 239 ENANAELIHTSWQLGTISYSSYKFT 263 (266)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (266)
++.+.++++++|.+|++||+||+|+
T Consensus 247 ~~~~~~~~~~~~~~g~l~~~~~~~~ 271 (271)
T 2pw6_A 247 GQEPITIPVEGIEMGSLSMLSVQIG 271 (271)
T ss_dssp SSSCEECSCCCEETTTEECCCEEEC
T ss_pred CCCCeEEEecceeeccceEEEEEEC
Confidence 8778888999999999999999995
No 2
>1b4u_B LIGA, LIGB, protocatechuate 4,5-dioxygenase; extradiol type dioxygenase, non-heme iron protein; HET: DHB; 2.20A {Sphingomonas paucimobilis} SCOP: c.56.6.1 PDB: 1bou_B
Probab=100.00 E-value=9.4e-48 Score=347.62 Aligned_cols=229 Identities=20% Similarity=0.263 Sum_probs=190.0
Q ss_pred CCCcceEEEEcCCCCCCCC------CCC---chHHHHHHHHHHHhhc--CCCCEEEEEeC-CCCCC-C-----CeEEecc
Q 024528 1 MSTVKNTFFISHGSPTLSI------DES---LPARHFLKAWKEQVFT--QRPNSILVISG-HWETD-V-----PTVNVVQ 62 (266)
Q Consensus 1 M~~~~~~~fisHg~P~~~~------~~~---~~~~~~~~~l~~~i~~--~~Pd~IvviS~-Hw~~~-~-----~~i~~~~ 62 (266)
|++|+.++++||. |.+.. ++. .++.++++++++++++ .+||+|||||| ||... . .+|+..+
T Consensus 1 M~~Iv~~~~~sH~-P~i~~~~~~~~~~~~~~~~~~~a~~~l~~~l~~~~~~Pd~Ivvis~~H~~~~~~~~~~~~~I~~~~ 79 (302)
T 1b4u_B 1 MARVTTGITSSHI-PALGAAIQTGTSDNDYWGPVFKGYQPIRDWIKQPGNMPDVVILVYNDHASAFDMNIIPTFAIGCAE 79 (302)
T ss_dssp -CEEEEEEEECCC-HHHHHHHHHTCTTSTTTHHHHHHHHHHHHHHTSTTTSCSEEEEEECCCSSSCCTTEEESBEEECSS
T ss_pred ChHHhEEeECCCC-CcccCccccCCcchhHHHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCcccccccccCCceEEecCC
Confidence 9999999999996 54432 111 3778899999999987 89999999999 55432 2 3455555
Q ss_pred CCCcccCCCCCccccccccC-CCCCCHHHHHHHHHHHHhCCCCcccccCCCCccccchhhhhhhccCCC---CCeEEEEe
Q 024528 63 QNDVIYDFYNFPEQMYKLKY-PAPGAPELAKRVKQLLTESGFNHVNEDTKRGLDHGAWVPLMLMYPEAN---IPVCQLSV 138 (266)
Q Consensus 63 ~~~~~~Df~gfp~~~y~~~y-~~~g~~eLa~~i~~~l~~~g~d~~~~~~~~~lDHG~~vPL~~l~p~~~---iPvV~vs~ 138 (266)
+++ +|||.++|. +| +++||++||++|++.+.+.|+| +..+.++++|||+||||.||+|+.+ +||||||+
T Consensus 80 ~~~-~~d~~~G~~-----~~~~~~G~peLA~~i~~~l~~~g~~-~~~~~~~~lDHG~~vpL~~l~p~~d~~~ipVVpisv 152 (302)
T 1b4u_B 80 TFK-PADEGWGPR-----PVPDVKGHPDLAWHIAQSLILDEFD-MTIMNQMDVDHGCTVPLSMIFGEPEEWPCKVIPFPV 152 (302)
T ss_dssp EEC-BCBCSSSBC-----SSCCEECCHHHHHHHHHHHHHTTCC-CEEESSCCBCHHHHHHHHHHHCSCSSCSSEEEEEEB
T ss_pred CCc-cCcccCCCc-----CCCCCCCCHHHHHHHHHHHHhcCCC-eeccCCcCCCceeeehHHHhcCcccCCcCcEEEEee
Confidence 566 799865552 57 8999999999999999999996 6666779999999999999999987 99999999
Q ss_pred cCCCC----hHHHHHHHHHhccc-----cCCCeEEEEecCCccccccccCCCCCcchhHHHHHHHHHHHHHcCCHhHHhc
Q 024528 139 QTRKD----GTHHYNMGKALAPL-----KDEGVLIIGSGSATHNLRALQFDGDSVASWASEFDNWLKDALLQGRYEDVNH 209 (266)
Q Consensus 139 ~~~~~----~~~~~~lG~aL~~~-----~d~~v~iiaSG~lSH~l~~~~~~~~~~~~~~~eFD~~v~~~l~~gd~~~l~~ 209 (266)
|...+ +++||+||++|+++ +|+||+|||||++|||+...+.+ .++++||+|++++| ++|.++|++
T Consensus 153 ~~~~~p~~~~~~~~~lG~aL~~~~~~~~~d~~VlIIgSG~lSH~l~~~~~g-----~~~~~fD~~~~~~l-~~d~~~L~~ 226 (302)
T 1b4u_B 153 NVVTYPPPSGKRCFALGDSIRAAVESFPEDLNVHVWGTGGMSHQLQGPRAG-----LINKEFDLNFIDKL-ISDPEELSK 226 (302)
T ss_dssp CCSSSCCCCHHHHHHHHHHHHHHHHTSSSCCEEEEEEECCSSCCCSSTTTT-----BCCHHHHHHHHHHH-HHCHHHHTT
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCEEEEEeCccccCCCCCcCc-----cchHHHHHHHHHHH-ccCHHHHHh
Confidence 97765 59999999999987 58999999999999999865431 47899999999999 999999999
Q ss_pred chhcCchhhhcCCCcCcHHHHHHHHccCCCCCceEE
Q 024528 210 YEQKAPCAKKAHPWPDHFYPLHVAMGAAGENANAEL 245 (266)
Q Consensus 210 ~~~~~p~~~~a~p~~~h~~pl~~~lGa~~~~~~~~~ 245 (266)
+.. .+..+.+|++..|++++++++||+++. +.+.
T Consensus 227 ~~~-~~~a~~ag~~~~~~~~~~~~~GA~~~~-~~~~ 260 (302)
T 1b4u_B 227 MPH-IQYLRESGSEGVELVMWLIMRGALPEK-VRDL 260 (302)
T ss_dssp CCH-HHHHHHHCTTGGGGHHHHHHHHTSCSC-EEEE
T ss_pred ccc-chHHHHcCCChhHHHHHHHHHHcCCCC-CCcE
Confidence 954 677888999888899999999999764 4443
No 3
>3vsj_B 2-amino-5-chlorophenol 1,6-dioxygenase beta subun; CNBC,oxidoreductase, 2-His-1-carboxylate facial triad motif, extradiol dioxygenase,; HET: 2XP; 2.30A {Comamonas testosteroni} PDB: 3vsh_B 3vsi_B* 3vsg_B*
Probab=100.00 E-value=1.2e-47 Score=348.36 Aligned_cols=239 Identities=18% Similarity=0.168 Sum_probs=194.8
Q ss_pred CCcceEEEEcCCCCCCCCC--------C----CchHHHHHHHHHHHhhcCCCCEEEEEeCCCCCCCCeEEecc-CCCccc
Q 024528 2 STVKNTFFISHGSPTLSID--------E----SLPARHFLKAWKEQVFTQRPNSILVISGHWETDVPTVNVVQ-QNDVIY 68 (266)
Q Consensus 2 ~~~~~~~fisHg~P~~~~~--------~----~~~~~~~~~~l~~~i~~~~Pd~IvviS~Hw~~~~~~i~~~~-~~~~~~ 68 (266)
++|+.++++||- |.|.+. + .+++.++|+++++++.+.+||+||||||||++..+.+.++. .....+
T Consensus 3 ~~iv~a~~~~H~-P~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~PdaIvviS~Hw~~~~~~~~~~~~~~~~~~ 81 (312)
T 3vsj_B 3 GEIIAGFLAPHP-PHLVYGENPPQNEPRSQGGWEVLRWAYERARERLDAMKPDVLLVHSPHWITSVGHHFLGVPELSGKS 81 (312)
T ss_dssp EEEEEEEECCCC-THHHHTTCCTTBCSCCSCCCHHHHHHHHHHHHHHHHHCCSEEEEEEEEEEESSSEEEECCSEEEEEE
T ss_pred ceEEEEEECCCC-CeecccccccccCcccchhHHHHHHHHHHHHHHHhhcCCCEEEEEcCCCCccCCeEEeccCCCCccc
Confidence 578899999994 444311 1 24678999999999988899999999999999887766532 234467
Q ss_pred CCCCCccccccccCCCCCCHHHHHHHHHHHHhCCCCcccc--cCCCCccccchhhhhhhccCCCCCeEEEEecC---CCC
Q 024528 69 DFYNFPEQMYKLKYPAPGAPELAKRVKQLLTESGFNHVNE--DTKRGLDHGAWVPLMLMYPEANIPVCQLSVQT---RKD 143 (266)
Q Consensus 69 Df~gfp~~~y~~~y~~~g~~eLa~~i~~~l~~~g~d~~~~--~~~~~lDHG~~vPL~~l~p~~~iPvV~vs~~~---~~~ 143 (266)
|+++||+. |+++|+++||++||++|++.+.+.||| +.. +.++++|||+||||.||+|+.++||||||+|. ..+
T Consensus 82 ~~~~f~~f-~~~~y~~~gd~eLA~~i~~~l~~~g~~-~~~~~~~~~~lDHG~~vpL~~l~p~~~~pVVpis~~~~p~~~~ 159 (312)
T 3vsj_B 82 VDPIFPNV-FRYDFSLNVDVELAEACAEEGRKAGLV-TKMMRNPKFRVDYGTITTLHLIRPQWDIPVVGISANNSPYYLN 159 (312)
T ss_dssp ECSSCTTT-CEEEEEEEBCHHHHHHHHHHHHHTTCC-EEEECCTTCCCCHHHHHHHHHHCTTCCSCEEEEEEESHHHHTC
T ss_pred cccCCCcc-CcccCCCCCCHHHHHHHHHHHHHcCCc-eeeccCccccCCcchHhHHHHhCCCCCCCEEEEeecCCCCCCC
Confidence 77777743 689999999999999999999999996 653 67899999999999999999999999999985 489
Q ss_pred hH----HHHHHHHHhcccc---CCCeEEEEecCCccccccccCC---C----CCcchhHHHHHHHHHHHHHcCCHhHHhc
Q 024528 144 GT----HHYNMGKALAPLK---DEGVLIIGSGSATHNLRALQFD---G----DSVASWASEFDNWLKDALLQGRYEDVNH 209 (266)
Q Consensus 144 ~~----~~~~lG~aL~~~~---d~~v~iiaSG~lSH~l~~~~~~---~----~~~~~~~~eFD~~v~~~l~~gd~~~l~~ 209 (266)
++ +|++||++|++++ |+||+|||||++|||+...++. . .++.+|+++||+|++++|+++|.++|++
T Consensus 160 ~~~~~~~~~~lG~aL~~~~~~~d~~Vlii~SG~lsH~l~~~~~~~~~~~~~~~~~~~~a~~fD~~~~~~l~~gD~~~L~~ 239 (312)
T 3vsj_B 160 TKEGMSEMDVLGKATREAIRKTGRKAVLLASNTLSHWHFHEEPTIPEDMSKEYPATMAGYQWDIRMIELMRQGKTSEVFK 239 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCSCCCCCCSCCSSTTCGGGCCCSCHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHhcCCCEEEEEECcccccCCcccccccccccccCCCCHHHHHHHHHHHHHHHcCCHHHHHh
Confidence 88 9999999999973 8999999999999999864431 0 2346899999999999999999999999
Q ss_pred chhcCchhhhcCCCcCcHHHHHHHHccCCCC-CceEEe
Q 024528 210 YEQKAPCAKKAHPWPDHFYPLHVAMGAAGEN-ANAELI 246 (266)
Q Consensus 210 ~~~~~p~~~~a~p~~~h~~pl~~~lGa~~~~-~~~~~~ 246 (266)
+..+ ....++ ++|++.++.+++||++.. .+++++
T Consensus 240 ~~~e--~~~~a~-g~cG~~~~~~l~gAl~~~~~~~~ll 274 (312)
T 3vsj_B 240 LLPQ--FIDEAF-AEVKSGAFTWMHAAMQYPELAAELF 274 (312)
T ss_dssp HHHH--HHHHHT-CGGGGSHHHHHHHHTTCCCCCCEEE
T ss_pred CCHH--HHHHhc-cccCHHHHHHHHHHhcCCCCcceEE
Confidence 9543 222232 489999999999998753 356655
No 4
>3vsj_A 2-amino-5-chlorophenol 1,6-dioxygenase alpha SUBU; CNBC,oxidoreductase, 2-His-1-carboxylate facial triad motif, extradiol dioxygenase,; HET: 2XP; 2.30A {Comamonas testosteroni} PDB: 3vsh_A 3vsi_A* 3vsg_A*
Probab=100.00 E-value=2.8e-46 Score=333.22 Aligned_cols=235 Identities=14% Similarity=0.145 Sum_probs=196.6
Q ss_pred cceEEEEcCCCCC--CCCCCC---chHHHHHHHHHHHhhcCCCCEEEEEeCCCCCCCCeEEecc-CCCcccCCCCCcccc
Q 024528 4 VKNTFFISHGSPT--LSIDES---LPARHFLKAWKEQVFTQRPNSILVISGHWETDVPTVNVVQ-QNDVIYDFYNFPEQM 77 (266)
Q Consensus 4 ~~~~~fisHg~P~--~~~~~~---~~~~~~~~~l~~~i~~~~Pd~IvviS~Hw~~~~~~i~~~~-~~~~~~Df~gfp~~~ 77 (266)
|+.++++|| || +++++. .++.++++++++++.+.+||+||||||||.+..+.++++. ++...+++++|| .+
T Consensus 3 iv~a~~~pH--~P~~~l~pe~~~~~~~~~a~~~~~~~l~~~~Pd~ivvis~h~~~~~~~~~i~~~~~~~~~~~~~f~-~~ 79 (271)
T 3vsj_A 3 VVSAFLVPG--TPLPQLKPEVPSWGQLAAATERAGKALAASRPDVVLVYSTQWLAVLDQQWLTRPRSEGVHVDENWY-EF 79 (271)
T ss_dssp EEEEEEECC--CSHHHHCTTSHHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEEEESSSEEEECCSEEEEEECCTTTG-GG
T ss_pred eEEEEEcCC--CCccCCCCCchHHHHHHHHHHHHHHHHHHcCCCEEEEEcCCcccccCcEEEeccCCCcccccCCch-hh
Confidence 577899999 55 666664 3667889999999988999999999999999888877643 345667888888 46
Q ss_pred ccccCCCCCCHHHHHHHHHHHHhCCCCccc--ccCCCCccccchhhhhhhccCCC-CCeEEEEecCCCChHHHHHHHHHh
Q 024528 78 YKLKYPAPGAPELAKRVKQLLTESGFNHVN--EDTKRGLDHGAWVPLMLMYPEAN-IPVCQLSVQTRKDGTHHYNMGKAL 154 (266)
Q Consensus 78 y~~~y~~~g~~eLa~~i~~~l~~~g~d~~~--~~~~~~lDHG~~vPL~~l~p~~~-iPvV~vs~~~~~~~~~~~~lG~aL 154 (266)
++++|+++||++||++|++.+.+.|+| +. .+.++++|||+||||.||+|+.+ +||||||+|...++++|++||++|
T Consensus 80 g~~~y~~~gd~~la~~i~~~~~~~g~~-~~~~~~~~~~lDHg~~vpl~~l~~~~~~~pvv~i~~~~~~~~~~~~~lG~al 158 (271)
T 3vsj_A 80 GDLAYDIRADTALAEACVTSSPLHGVH-ARGVNYDGFPIDTGTITACTLMGIGTDAFPLVVGSNNLYHSGEITEKLAALA 158 (271)
T ss_dssp CCEEEEEEBCHHHHHHHHHHHHHTTCC-EEEECCTTCCCCHHHHHHHHHHTCSSSSSCEEEEEEETTCCHHHHHHHHHHH
T ss_pred ccccccCcCCHHHHHHHHHHHHHCCCc-EEeecCCCCCcchhHHHHHHHHhccCCCCCEEEEECCCCCCHHHHHHHHHHH
Confidence 789999999999999999999999996 54 35789999999999999999976 999999999899999999999999
Q ss_pred cccc---CCCeEEEEecCCccccccccCC---CCCcchhHHHHHHHHHHHHHcCCHhHHhcchhcCchhhhcCC-CcCcH
Q 024528 155 APLK---DEGVLIIGSGSATHNLRALQFD---GDSVASWASEFDNWLKDALLQGRYEDVNHYEQKAPCAKKAHP-WPDHF 227 (266)
Q Consensus 155 ~~~~---d~~v~iiaSG~lSH~l~~~~~~---~~~~~~~~~eFD~~v~~~l~~gd~~~l~~~~~~~p~~~~a~p-~~~h~ 227 (266)
+++. ++||+|||||++|||+...++. ..++.+|+++||++++++|+++|.++|+++..+ ..... ++|++
T Consensus 159 ~~~~~~~~~~vlii~SGdlsH~l~~~~~~~~~~~~~~~~a~~fD~~~~~~l~~~D~~~L~~~~~~----~~~~a~g~~G~ 234 (271)
T 3vsj_A 159 VDCAKDQNKRVAVVGVGGLSGSLFREEIDPREDRIANEEDDKWNRRVLKLIEAGDVSALREAMPV----YAKEARVDMGF 234 (271)
T ss_dssp HHHHHHTTCCEEEEEECCSCCCCCSSCCCGGGCCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHH----HHHHTTCGGGG
T ss_pred HHHHHHcCCCEEEEEECccccCCcccCCCCCCCCCCCcchHHHHHHHHHHHHCCCHHHHHhcCHH----HHHHhccCCcH
Confidence 9963 8999999999999999643321 113468999999999999999999999999543 33444 68999
Q ss_pred HHHHHHHccCCCC-CceEEe
Q 024528 228 YPLHVAMGAAGEN-ANAELI 246 (266)
Q Consensus 228 ~pl~~~lGa~~~~-~~~~~~ 246 (266)
.++.+++||+++. .+++.+
T Consensus 235 ~~~~~l~gal~~~~~~~~ll 254 (271)
T 3vsj_A 235 KHLHWILGALKGKFSGANVL 254 (271)
T ss_dssp HHHHHHHHHTTTCCSEEEEE
T ss_pred HHHHHHHHhcCCCCCCccee
Confidence 9999999998753 355554
No 5
>3bcz_A Protein MEMO1; alpha/beta structure, peptide binding protein; 2.10A {Homo sapiens} PDB: 3bd0_A
Probab=99.78 E-value=5.3e-19 Score=158.80 Aligned_cols=177 Identities=12% Similarity=0.067 Sum_probs=128.0
Q ss_pred cCCCCEEEEEeC-CCCCCCCeEEeccCCCcccCCCCCccccccccCCCCCCHHHHHHHHHHHHhCCCCccccc-CCCCcc
Q 024528 38 TQRPNSILVISG-HWETDVPTVNVVQQNDVIYDFYNFPEQMYKLKYPAPGAPELAKRVKQLLTESGFNHVNED-TKRGLD 115 (266)
Q Consensus 38 ~~~Pd~IvviS~-Hw~~~~~~i~~~~~~~~~~Df~gfp~~~y~~~y~~~g~~eLa~~i~~~l~~~g~d~~~~~-~~~~lD 115 (266)
..+||+|||++| |..... .+.+..... | .-|- .+.+.|.+++++|.+.. .+ ...+ .....+
T Consensus 64 ~~~p~~VvilGP~H~~~~~-~~a~~~~~~----~-~TPl------G~l~vD~el~~~L~~~~---~~--~~~d~~~~~~E 126 (293)
T 3bcz_A 64 PSITRRIFILGPSHHVPLS-RCALSSVDI----Y-RTPL------YDLRIDQKIYGELWKTG---MF--ERMSLQTDEDE 126 (293)
T ss_dssp TTTCCEEEEEEECSSSCCS-SEEECSCSE----E-CCSS------CCEEBCHHHHHHHHHTS---CE--EECCHHHHHHC
T ss_pred cCCCCEEEEECCCCCCCCC-ceEEccCCc----e-ECCC------ccCCCCHHHHHHHHhcC---Cc--ccccccccchh
Confidence 468999999999 976543 344432111 1 1121 14566999999886652 22 1121 234679
Q ss_pred ccchhhhhhhccC-----CCCCeEEEEecCCCChHHHHHHHHHhcccc-CCCeEEEEecCCccccccccCCCC-----Cc
Q 024528 116 HGAWVPLMLMYPE-----ANIPVCQLSVQTRKDGTHHYNMGKALAPLK-DEGVLIIGSGSATHNLRALQFDGD-----SV 184 (266)
Q Consensus 116 HG~~vPL~~l~p~-----~~iPvV~vs~~~~~~~~~~~~lG~aL~~~~-d~~v~iiaSG~lSH~l~~~~~~~~-----~~ 184 (266)
|++-|+|-|+..- .++|||||.++ ..+++++++||++|+++. +.+++||+|||+||+-...+..+. ..
T Consensus 127 HSlEv~LPfL~~~~~~~~~~~~IVPI~vg-~~~~~~~~~~g~~l~~~~~~~~~l~V~SsDlsH~g~~fgy~~~~~~~~~~ 205 (293)
T 3bcz_A 127 HSIEMHLPYTAKAMESHKDEFTIIPVLVG-ALSESKEQEFGKLFSKYLADPSNLFVVSSDFCHWGQRFRYSYYDESQGEI 205 (293)
T ss_dssp CTTGGGHHHHHHHTGGGTTSCEEEEEEEC-CCCHHHHHHHHHHHHHHHTCTTEEEEEECCCCEEBGGGTBCCCCGGGCSH
T ss_pred eEEEeeHHHHHHHhCCCCCCceEEEEEcC-CCCHHHHHHHHHHHHHHHhCCCeEEEEeCCccCCCCCCCCCccccccchh
Confidence 9999999887642 37999999995 589999999999999975 459999999999998332221100 12
Q ss_pred chhHHHHHHHHHHHHHcCCHhHHhcchhcCchhhhcCCCcCcHHHHHHHHccCC
Q 024528 185 ASWASEFDNWLKDALLQGRYEDVNHYEQKAPCAKKAHPWPDHFYPLHVAMGAAG 238 (266)
Q Consensus 185 ~~~~~eFD~~v~~~l~~gd~~~l~~~~~~~p~~~~a~p~~~h~~pl~~~lGa~~ 238 (266)
.+.+++||+.++++|+++|.+++.++.+ ....+.|++.|+.++++++.
T Consensus 206 ~~~~~~~D~~~i~~i~~~d~~~~~~~~~------~~~~t~CG~~pi~~~l~a~~ 253 (293)
T 3bcz_A 206 YRSIEHLDKMGMSIIEQLDPVSFSNYLK------KYHNTICGRHPIGVLLNAIT 253 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHH------HHCCCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHH------HhCcCcCcHHHHHHHHHHHH
Confidence 3668999999999999999999998743 35668999999999988764
No 6
>2gfq_A UPF0204 protein PH0006; structural genomics, PSI, Pro structure initiative, midwest center for structural genomic unknown function; 1.75A {Pyrococcus horikoshii} SCOP: c.56.7.1
Probab=75.98 E-value=21 Score=31.39 Aligned_cols=115 Identities=17% Similarity=0.192 Sum_probs=75.1
Q ss_pred cCCCCEEEEEeCCCC-CCCCeEEecc--CCCcccCCCCCccccccccCCCCCCHHHHHHHHHHHHhC---CCCcccccCC
Q 024528 38 TQRPNSILVISGHWE-TDVPTVNVVQ--QNDVIYDFYNFPEQMYKLKYPAPGAPELAKRVKQLLTES---GFNHVNEDTK 111 (266)
Q Consensus 38 ~~~Pd~IvviS~Hw~-~~~~~i~~~~--~~~~~~Df~gfp~~~y~~~y~~~g~~eLa~~i~~~l~~~---g~d~~~~~~~ 111 (266)
-.+||.||++|=|-- +..+.+|+.. ++ ...+|+|-|.+ =++.+|.+...+.+.+++. +++ ++...
T Consensus 90 g~~~d~iIflSRH~s~~~~p~LTvH~tGN~-g~a~~GG~p~~------la~a~P~~~~~lLr~l~~~~~~~fe-vt~EA- 160 (298)
T 2gfq_A 90 GFKPEIIAFASRHSSKQKLPALTTHVTGNW-GKAMYGGKDES------FAVAIPSAMKLSLLKMSELNDLGWT-VCYEA- 160 (298)
T ss_dssp SCCCSEEEEEEEEECSSCCCEEEEECCEES-SCCSSSSCTTE------ECBBCHHHHHHHHHHHHHHCCSCCE-EEECC-
T ss_pred cCCCcEEEEEeccccCCCCceEEEeCCCCC-CccccCCCCCc------cccCCHHHHHHHHHHHHHhcCCCCE-EEEec-
Confidence 346999999999965 4556666642 23 36678888876 5677899988888888655 443 33211
Q ss_pred CCccccchhhhhhhccCCCCCeEEEEecCC----CChHHHHHHHHHhccccC-------CCeEEEEecCCcc
Q 024528 112 RGLDHGAWVPLMLMYPEANIPVCQLSVQTR----KDGTHHYNMGKALAPLKD-------EGVLIIGSGSATH 172 (266)
Q Consensus 112 ~~lDHG~~vPL~~l~p~~~iPvV~vs~~~~----~~~~~~~~lG~aL~~~~d-------~~v~iiaSG~lSH 172 (266)
--||-. +.++|.+=|=|-+. .+++..-.+.++|-++.+ +...+||-||. |
T Consensus 161 --THHGPt--------~l~~Ps~FVEIGSte~eW~d~~A~~~vA~av~~~l~~~~~~~~~~~~~iG~GGg-H 221 (298)
T 2gfq_A 161 --THHGPT--------ELEVPSFFIEIGSSEEEWINDRAGEIIAETIIYVLDNYEKGRSKFKVALGIGGG-H 221 (298)
T ss_dssp --SCSSCC--------CCCSBEEEEEEEESHHHHTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECSC-T
T ss_pred --cccCCC--------CCCCCcEEEEeCCCHHHhCChHHHHHHHHHHHHHhccchhcccCCCEEEEeCCC-C
Confidence 245431 25788877777433 356667777777666542 45678999887 6
No 7
>1yqe_A Hypothetical UPF0204 protein AF0625; AF0625,sulfur SAD, structural genomics, PSI, protein structure initiative; 1.83A {Archaeoglobus fulgidus} SCOP: c.56.7.1
Probab=74.82 E-value=38 Score=29.38 Aligned_cols=114 Identities=21% Similarity=0.211 Sum_probs=75.2
Q ss_pred CCCEEEEEeCCCC-CCCCeEEecc--CCCcccCCCCCccccccccCCCCCCHHHHHHHHHHHHhC-----CCCcccccCC
Q 024528 40 RPNSILVISGHWE-TDVPTVNVVQ--QNDVIYDFYNFPEQMYKLKYPAPGAPELAKRVKQLLTES-----GFNHVNEDTK 111 (266)
Q Consensus 40 ~Pd~IvviS~Hw~-~~~~~i~~~~--~~~~~~Df~gfp~~~y~~~y~~~g~~eLa~~i~~~l~~~-----g~d~~~~~~~ 111 (266)
.+|.||++|=|-- +..+.+|+.. ++ ...+|+|-|.+ =++.+|.+...+.+.+++. +++ ++...
T Consensus 70 g~d~iIflSRH~s~~~~p~LTvH~tGN~-~~a~~GG~p~~------la~a~P~~~~~~L~~l~~~~~~~~~fe-v~~EA- 140 (282)
T 1yqe_A 70 DFEEILFASRHSSKDGRKIFTVHVSGNV-GTADFGGKPYS------LAKPSPQTMKNYVLALRERLDRKPEFE-FTMEV- 140 (282)
T ss_dssp CCSEEEEEEEEECTTCCCEEEEECCBCS-SCCTTSSCTTC------BCCBCHHHHHHHHHHHHTTGGGSTTCE-EEECC-
T ss_pred CCCEEEEEeccccCCCCceEEEeCCCCC-CccccCCCCCc------cccCCHHHHHHHHHHHHHHhccCCCcE-EEEEc-
Confidence 4799999999965 4566666642 33 46678888876 5778999998888888765 342 33211
Q ss_pred CCccccchhhhhhhccCCCCCeEEEEecCC----CChHHHHHHHHHhccccC----CCeEEEEecCCccc
Q 024528 112 RGLDHGAWVPLMLMYPEANIPVCQLSVQTR----KDGTHHYNMGKALAPLKD----EGVLIIGSGSATHN 173 (266)
Q Consensus 112 ~~lDHG~~vPL~~l~p~~~iPvV~vs~~~~----~~~~~~~~lG~aL~~~~d----~~v~iiaSG~lSH~ 173 (266)
--||- -+.++|.+=|=+-+. .+++.+-.+.++|-++.+ +...+||-||. |-
T Consensus 141 --THHGP--------t~~~~Ps~FVEIGSte~eW~d~~a~~~vA~av~~~l~~~~~~~~~~ig~GGg-HY 199 (282)
T 1yqe_A 141 --THHGP--------SEISKPSAFYEIGSTEEEWKDREAAEVVAEAMLDAIRAEKMDWNVAVGVGGT-HY 199 (282)
T ss_dssp --SCSSC--------CCCCSCEEEEEEEESHHHHTCHHHHHHHHHHHHHHHHCCCCCCEEEEEECSC-TT
T ss_pred --cccCC--------CCCCCCcEEEEeCCCHHHhCChHHHHHHHHHHHHHhccccccCCEEEEeCCC-Cc
Confidence 24543 125788877777433 356667777777666542 45678999887 63
No 8
>2odf_A AGR_C_3887P, hypothetical protein ATU2144; structural genomics, unknown FUNC PSI-2, MCSG, protein structure initiative; 1.90A {Agrobacterium tumefaciens str} SCOP: c.56.5.9
Probab=65.70 E-value=6.9 Score=33.56 Aligned_cols=70 Identities=11% Similarity=0.167 Sum_probs=45.8
Q ss_pred CCHHHHHHHHHHHHhCCCCcccccCCCCcccc-chhhhhhhccCCCCCeEEEEecCC--CChHHHHHHHHHhccc
Q 024528 86 GAPELAKRVKQLLTESGFNHVNEDTKRGLDHG-AWVPLMLMYPEANIPVCQLSVQTR--KDGTHHYNMGKALAPL 157 (266)
Q Consensus 86 g~~eLa~~i~~~l~~~g~d~~~~~~~~~lDHG-~~vPL~~l~p~~~iPvV~vs~~~~--~~~~~~~~lG~aL~~~ 157 (266)
.+++|++.+.+.+++.|+ .+..+..+.-.++ .++-=++-.| ..++.|||-++.. ++......+.+.|+++
T Consensus 175 ~~~~l~~~~~~~l~~~g~-~v~~N~Py~G~~~~~~~~~~~g~~-~g~~avqiEi~~~lymde~~~~~~a~~l~~~ 247 (257)
T 2odf_A 175 NDSRLADAMLAGAEGASL-TVRRNDPYGPEDGVTHTLRLHALP-DGLLNVMIEIRNDLIANEGEQAAIAGFLHEL 247 (257)
T ss_dssp SCCHHHHHHHHHTTTCSS-CEEETCSCCGGGTTTHHHHHHTGG-GTCEEEEEEEEGGGGSSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCC-EEEeCCCCcCCCCCCeeeHhhcCc-CCceEEEEEEehhhhcCCcchhHHHHHHHHH
Confidence 378999999999998888 4766555543333 2232233334 7899999999754 5665555555555553
No 9
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=60.35 E-value=75 Score=28.78 Aligned_cols=77 Identities=13% Similarity=0.121 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHhCCCCccccc--CC-CCccccchhhhhhhccCCCCCeEEEEecC---CCChHHHHHHHHHhcc-ccCCC
Q 024528 89 ELAKRVKQLLTESGFNHVNED--TK-RGLDHGAWVPLMLMYPEANIPVCQLSVQT---RKDGTHHYNMGKALAP-LKDEG 161 (266)
Q Consensus 89 eLa~~i~~~l~~~g~d~~~~~--~~-~~lDHG~~vPL~~l~p~~~iPvV~vs~~~---~~~~~~~~~lG~aL~~-~~d~~ 161 (266)
.+|+.|++.+.++|++ +..- .+ -.-|.+-. +.--.+..-|-+..++ .+.|.-..-|...... ...+.
T Consensus 281 ~mA~~ia~gl~~~Gv~-~~~~~~~d~~~~~~s~i-----~~~i~~~~~ivlGspT~~~~~~p~~~~~l~~l~~~~~~~K~ 354 (410)
T 4dik_A 281 NVMKKAIDSLKEKGFT-PVVYKFSDEERPAISEI-----LKDIPDSEALIFGVSTYEAEIHPLMRFTLLEIIDKANYEKP 354 (410)
T ss_dssp HHHHHHHHHHHHTTCE-EEEEEECSSCCCCHHHH-----HHHSTTCSEEEEEECCTTSSSCHHHHHHHHHHHHHCCCCCE
T ss_pred HHHHHHHHHHHhcCCc-eEEEEeccCCCCCHHHH-----HHHHHhCCeEEEEeCCcCCcCCHHHHHHHHHHHhcccCCCE
Confidence 4799999999999984 4311 11 11122211 1111355555555543 2344433344444332 24688
Q ss_pred eEEEEecCCc
Q 024528 162 VLIIGSGSAT 171 (266)
Q Consensus 162 v~iiaSG~lS 171 (266)
++++||+|.|
T Consensus 355 ~~~FGSyGWs 364 (410)
T 4dik_A 355 VLVFGVHGWA 364 (410)
T ss_dssp EEEEEECCCC
T ss_pred EEEEECCCCC
Confidence 9999999875
No 10
>2q7s_A N-formylglutamate amidohydrolase; YP_297560.1, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE; 2.00A {Ralstonia eutropha} SCOP: c.56.5.9
Probab=60.19 E-value=8.7 Score=33.60 Aligned_cols=54 Identities=19% Similarity=0.262 Sum_probs=40.0
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCcccccCCCCccccchhhhhhhccCCCCCeEEEEecC
Q 024528 83 PAPGAPELAKRVKQLLTESGFNHVNEDTKRGLDHGAWVPLMLMYPEANIPVCQLSVQT 140 (266)
Q Consensus 83 ~~~g~~eLa~~i~~~l~~~g~d~~~~~~~~~lDHG~~vPL~~l~p~~~iPvV~vs~~~ 140 (266)
....+++|++.+.+.+.+.|+. +..+..+. |.++.=++=.|...++.|||-++.
T Consensus 200 g~s~~~~l~~~~~~~l~~~g~~-v~~N~Py~---Gg~it~~yg~P~~g~~aiqiEi~~ 253 (290)
T 2q7s_A 200 GTTCEPGLVDLVERELREKGYT-VARNDPYK---GVQLIAQIGRPAERRNSLQIEIRR 253 (290)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCC-EEESSSCC---C-CHHHHHCBGGGTEEEEEEEEEG
T ss_pred CCcCCHHHHHHHHHHHhhcCCE-EEeCCCcC---cchhHHhhCCCCCCcEEEEEEEch
Confidence 4445899999999999999984 66555443 455544555677899999999964
No 11
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=55.00 E-value=10 Score=30.85 Aligned_cols=68 Identities=15% Similarity=0.204 Sum_probs=45.7
Q ss_pred HHHHHHHHHhCCCCcccccCCCCccccchhhhhhhccCCCCCeEEEEecCCCChHHHHHHHHHhcccc--CCCeEEEEec
Q 024528 91 AKRVKQLLTESGFNHVNEDTKRGLDHGAWVPLMLMYPEANIPVCQLSVQTRKDGTHHYNMGKALAPLK--DEGVLIIGSG 168 (266)
Q Consensus 91 a~~i~~~l~~~g~d~~~~~~~~~lDHG~~vPL~~l~p~~~iPvV~vs~~~~~~~~~~~~lG~aL~~~~--d~~v~iiaSG 168 (266)
+-.+++.+ +.|.| +-. .|| |+ -.++....++|||.|.++ .|++=++|.+++ ..+|+|||.+
T Consensus 41 ~v~~a~~~-~~~~d-VII--SRG---gt---a~~lr~~~~iPVV~I~~s-------~~Dil~al~~a~~~~~kIavvg~~ 103 (196)
T 2q5c_A 41 ASKIAFGL-QDEVD-AII--SRG---AT---SDYIKKSVSIPSISIKVT-------RFDTMRAVYNAKRFGNELALIAYK 103 (196)
T ss_dssp HHHHHHHH-TTTCS-EEE--EEH---HH---HHHHHTTCSSCEEEECCC-------HHHHHHHHHHHGGGCSEEEEEEES
T ss_pred HHHHHHHh-cCCCe-EEE--ECC---hH---HHHHHHhCCCCEEEEcCC-------HhHHHHHHHHHHhhCCcEEEEeCc
Confidence 44455555 66775 322 222 11 234444568999999986 588889988886 3789999999
Q ss_pred CCccccc
Q 024528 169 SATHNLR 175 (266)
Q Consensus 169 ~lSH~l~ 175 (266)
+....+.
T Consensus 104 ~~~~~~~ 110 (196)
T 2q5c_A 104 HSIVDKH 110 (196)
T ss_dssp SCSSCHH
T ss_pred chhhHHH
Confidence 8876553
No 12
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=51.73 E-value=16 Score=30.66 Aligned_cols=45 Identities=13% Similarity=0.189 Sum_probs=36.0
Q ss_pred hhccCCCCCeEEEEecCCCChHHHHHHHHHhccccC--CCeEEEEecCCccccc
Q 024528 124 LMYPEANIPVCQLSVQTRKDGTHHYNMGKALAPLKD--EGVLIIGSGSATHNLR 175 (266)
Q Consensus 124 ~l~p~~~iPvV~vs~~~~~~~~~~~~lG~aL~~~~d--~~v~iiaSG~lSH~l~ 175 (266)
++....++|||.|.++ .|++=++|.++++ .+|+|||.++....+.
T Consensus 76 ~Lr~~~~iPVV~I~vs-------~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~ 122 (225)
T 2pju_A 76 YLKSRLSVPVILIKPS-------GYDVLQFLAKAGKLTSSIGVVTYQETIPALV 122 (225)
T ss_dssp HHHTTCSSCEEEECCC-------HHHHHHHHHHTTCTTSCEEEEEESSCCHHHH
T ss_pred HHHhhCCCCEEEecCC-------HHHHHHHHHHHHhhCCcEEEEeCchhhhHHH
Confidence 4444568999999986 5899999999873 7899999999876543
No 13
>1o51_A Hypothetical protein TM0021; ferredoxin-like fold, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.50A {Thermotoga maritima} SCOP: d.58.5.4
Probab=47.56 E-value=78 Score=23.42 Aligned_cols=75 Identities=12% Similarity=0.106 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHhCCCCccc-ccCCCCc-cccchhhhhhhccCCCCCeEEEEecCCCChHHHHHHHHHhccccCCCeEEE
Q 024528 88 PELAKRVKQLLTESGFNHVN-EDTKRGL-DHGAWVPLMLMYPEANIPVCQLSVQTRKDGTHHYNMGKALAPLKDEGVLII 165 (266)
Q Consensus 88 ~eLa~~i~~~l~~~g~d~~~-~~~~~~l-DHG~~vPL~~l~p~~~iPvV~vs~~~~~~~~~~~~lG~aL~~~~d~~v~ii 165 (266)
.-|.+.|.+.+++.|+.-++ ...-.|. .||.+---.++.-..|.||+-..+ .++++.-++=..|+++.+.+++.+
T Consensus 29 ~pL~~~Iv~~~~~~GiaGaTV~rgi~GfG~~g~ih~~~~l~ls~dlPV~Ie~V---d~~eki~~~l~~l~~~v~~Glvt~ 105 (114)
T 1o51_A 29 KPLFEYLVKRAYELGMKGVTVYRGIMGFGHKRHMHRSDFFSLSPDLPIVLEIV---DEEERINLFLKEIDNIDFDGLVFT 105 (114)
T ss_dssp EEHHHHHHHHHHHTTCSCCEEEECSCCCCC-------------CCCEEEEEEE---ECHHHHHHHHHHHHTCCCCSEEEE
T ss_pred eEHHHHHHHHHHHCCCCeEEEEcCcEEECCCCCEEccceeecCCCCCEEEEEE---cCHHHHHHHHHHHHHHhCCCEEEE
Confidence 33788999999999983111 1222333 334344445555456899998887 678888888888888877665554
No 14
>1wn9_A The hypothetical protein (TT1805); thermus thermophillus, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.58A {Thermus thermophilus} SCOP: d.319.1.1 PDB: 1wna_A
Probab=40.06 E-value=30 Score=26.20 Aligned_cols=69 Identities=17% Similarity=0.269 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhhcC-CCCEEEEEeCCCCCCCC------eEEeccCCCcccCCCCCccccccccCCCCCCHHHHHHHHHHH
Q 024528 26 RHFLKAWKEQVFTQ-RPNSILVISGHWETDVP------TVNVVQQNDVIYDFYNFPEQMYKLKYPAPGAPELAKRVKQLL 98 (266)
Q Consensus 26 ~~~~~~l~~~i~~~-~Pd~IvviS~Hw~~~~~------~i~~~~~~~~~~Df~gfp~~~y~~~y~~~g~~eLa~~i~~~l 98 (266)
...|+.+.+.++.. =|+++|++-..|+...+ -|..+.++-+.-|- |...|. .|+..|++ ++..+
T Consensus 11 ~~Tl~Al~~aLk~~~fp~~~v~liTDwQd~R~~ARYa~ll~~gk~~llt~dA-------FGPafg-~G~~ALaE-Lv~wl 81 (131)
T 1wn9_A 11 RVSLEALKAALGGLKLSEAKVYLITDWQDKRDQARYALLLHTGKKDLLVPDA-------FGPAFP-GGEEALSE-LVGLL 81 (131)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEEEECCSSGGGCCEEEEEECSSCEEEEEEE-------ESTTST-THHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHccCCCCCceEEEEecccccchhhhhhheeecCCcccccccc-------cCCCcc-cHHHHHHH-HHHHH
Confidence 35677788777644 49999988888987653 24444444344442 223467 88999987 56677
Q ss_pred HhCCC
Q 024528 99 TESGF 103 (266)
Q Consensus 99 ~~~g~ 103 (266)
.+.|+
T Consensus 82 ~~~G~ 86 (131)
T 1wn9_A 82 LAQGA 86 (131)
T ss_dssp HHTTC
T ss_pred HHcCC
Confidence 88887
No 15
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=38.98 E-value=58 Score=26.10 Aligned_cols=74 Identities=12% Similarity=0.122 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCCCccccchhhhhhhccCCCCCeEEEEecCC--CChHHHHHHHHHhcc-----ccCC
Q 024528 88 PELAKRVKQLLTESGFNHVNEDTKRGLDHGAWVPLMLMYPEANIPVCQLSVQTR--KDGTHHYNMGKALAP-----LKDE 160 (266)
Q Consensus 88 ~eLa~~i~~~l~~~g~d~~~~~~~~~lDHG~~vPL~~l~p~~~iPvV~vs~~~~--~~~~~~~~lG~aL~~-----~~d~ 160 (266)
..+|+.|.+.+.+.|++ +.. ..++. ..+ -. .+...|-+..++. -.|.....|=+.|.. +..+
T Consensus 36 e~~A~~ia~~l~~~g~~-v~v---~~l~~--~~~---~l--~~~d~vi~g~~Ty~G~~p~~~~~fl~~L~~~~~~~l~~~ 104 (191)
T 1bvy_F 36 EGTARDLADIAMSKGFA-PQV---ATLDS--HAG---NL--PREGAVLIVTASYNGHPPDNAKQFVDWLDQASADEVKGV 104 (191)
T ss_dssp HHHHHHHHHHHHTTTCC-CEE---EEGGG--STT---CC--CSSSEEEEEECCBTTBCCTTTHHHHHHHHTCCSSCCTTC
T ss_pred HHHHHHHHHHHHhCCCc-eEE---eeHHH--hhh---hh--hhCCeEEEEEeecCCCcCHHHHHHHHHHHhccchhhCCC
Confidence 45899999999888884 432 11221 011 01 1223333333322 122333333344432 4568
Q ss_pred CeEEEEecCCcc
Q 024528 161 GVLIIGSGSATH 172 (266)
Q Consensus 161 ~v~iiaSG~lSH 172 (266)
+++|+|+|+.+.
T Consensus 105 ~~avfG~Gds~y 116 (191)
T 1bvy_F 105 RYSVFGCGDKNW 116 (191)
T ss_dssp CEEEEEEECTTS
T ss_pred EEEEEEccCCch
Confidence 999999998754
No 16
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=37.60 E-value=65 Score=30.91 Aligned_cols=81 Identities=19% Similarity=0.147 Sum_probs=41.3
Q ss_pred CHHHHHHHHHHHHhCCCCcccccCCCCccccchhhhhhhccCCCC-CeEEEEecC--CCChHHHHHHHHHhc----cccC
Q 024528 87 APELAKRVKQLLTESGFNHVNEDTKRGLDHGAWVPLMLMYPEANI-PVCQLSVQT--RKDGTHHYNMGKALA----PLKD 159 (266)
Q Consensus 87 ~~eLa~~i~~~l~~~g~d~~~~~~~~~lDHG~~vPL~~l~p~~~i-PvV~vs~~~--~~~~~~~~~lG~aL~----~~~d 159 (266)
..++|++|++.+.+.|++ +....--..|-.....+ ++.+- .||-++... +..|.....|=+.|. .+..
T Consensus 32 te~~A~~la~~l~~~g~~-~~v~~~~~~~~~~l~~~----~~~~~~~vi~~~sT~G~G~~pd~~~~F~~~L~~~~~~l~~ 106 (618)
T 3qe2_A 32 AEEFANRLSKDAHRYGMR-GMSADPEEYDLADLSSL----PEIDNALVVFCMATYGEGDPTDNAQDFYDWLQETDVDLSG 106 (618)
T ss_dssp HHHHHHHHHHHGGGGTCC-EEEECGGGSCGGGGGGG----GGSTTCEEEEEEECBGGGBCCGGGHHHHHHHHHCCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCc-eEEechHHcCHHHhhhc----ccccCcEEEEEcCccCCCCCCHHHHHHHHHHhhccccccC
Confidence 356899999999889984 43211111222221111 11122 344443322 222323333333343 3567
Q ss_pred CCeEEEEecCCcc
Q 024528 160 EGVLIIGSGSATH 172 (266)
Q Consensus 160 ~~v~iiaSG~lSH 172 (266)
++++|+|+|+.+-
T Consensus 107 ~~~avfGlGd~~Y 119 (618)
T 3qe2_A 107 VKFAVFGLGNKTY 119 (618)
T ss_dssp CEEEEEEEECTTS
T ss_pred CEEEEEeCCCCCc
Confidence 8999999999875
No 17
>2dcl_A Hypothetical UPF0166 protein PH1503; hexamer, structural genomics, NPPSFA, national project on PR structural and functional analyses; HET: AMP; 2.28A {Pyrococcus horikoshii}
Probab=37.07 E-value=71 Score=24.15 Aligned_cols=77 Identities=14% Similarity=0.212 Sum_probs=44.6
Q ss_pred CHHHHHHHHHHHHhCCCCccc--ccCCCCc-cccchhhhhhhccCCCCCeEEEEecCCCChHHHHHHHHHhccccCCCeE
Q 024528 87 APELAKRVKQLLTESGFNHVN--EDTKRGL-DHGAWVPLMLMYPEANIPVCQLSVQTRKDGTHHYNMGKALAPLKDEGVL 163 (266)
Q Consensus 87 ~~eLa~~i~~~l~~~g~d~~~--~~~~~~l-DHG~~vPL~~l~p~~~iPvV~vs~~~~~~~~~~~~lG~aL~~~~d~~v~ 163 (266)
..-|.+.|.+.+++.|+. -+ ...-.|+ .||.+---.++.-..|.||+-..+ .++++.-+|=..|.++.+.+++
T Consensus 24 g~pL~~~Iv~~a~~~Gia-GaTV~rgi~GfG~~g~ih~~~~l~ls~dlPVvIe~V---d~~eki~~~l~~l~~lv~~GlV 99 (127)
T 2dcl_A 24 GRPLYKVIVEKLREMGIA-GATVYRGIYGFGKKSRVHSSDVIRLSTDLPIIVEVV---DRGHNIEKVVNVIKPMIKDGMI 99 (127)
T ss_dssp TEEHHHHHHHHHHHTTCS-CEEEEECSEEEC--------------CCCEEEEEEE---EEHHHHHHHHHHHTTTCSSSEE
T ss_pred CcCHHHHHHHHHHHCCCC-eEEEEcCcEEECCCCCEecceeeecCCCCCEEEEEE---cCHHHHHHHHHHHHHHhCCCEE
Confidence 344889999999999993 22 1112222 334444445555456899998887 6778888888888888776655
Q ss_pred EEEe
Q 024528 164 IIGS 167 (266)
Q Consensus 164 iiaS 167 (266)
.+--
T Consensus 100 t~e~ 103 (127)
T 2dcl_A 100 TVEP 103 (127)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5543
No 18
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=33.66 E-value=1.4e+02 Score=22.04 Aligned_cols=76 Identities=11% Similarity=0.129 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCCCccccchhhhhhhccCCCCCeEEEEecCC-----CChHHHHHHHHHhcc--ccCC
Q 024528 88 PELAKRVKQLLTESGFNHVNEDTKRGLDHGAWVPLMLMYPEANIPVCQLSVQTR-----KDGTHHYNMGKALAP--LKDE 160 (266)
Q Consensus 88 ~eLa~~i~~~l~~~g~d~~~~~~~~~lDHG~~vPL~~l~p~~~iPvV~vs~~~~-----~~~~~~~~lG~aL~~--~~d~ 160 (266)
..+|+.|.+.+.+.|++ +....-...+- .-+.. +.-.|-+..+.. .-|.....+=+.|.. +..+
T Consensus 16 ~~~A~~ia~~l~~~g~~-v~~~~~~~~~~------~~l~~--~~d~ii~g~pty~~~~G~~p~~~~~fl~~l~~~~l~~k 86 (148)
T 3f6r_A 16 ESIAQKLEELIAAGGHE-VTLLNAADASA------ENLAD--GYDAVLFGCSAWGMEDLEMQDDFLSLFEEFDRIGLAGR 86 (148)
T ss_dssp HHHHHHHHHHHHTTTCE-EEEEETTTBCC------TTTTT--TCSEEEEEECEECSSSCEECHHHHHHHTTGGGTCCTTC
T ss_pred HHHHHHHHHHHHhCCCe-EEEEehhhCCH------hHhcc--cCCEEEEEecccCCCCCCCcHHHHHHHHHhhccCCCCC
Confidence 46899999999988874 44211111110 00100 233333333221 223444444444433 5578
Q ss_pred CeEEEEecCCcc
Q 024528 161 GVLIIGSGSATH 172 (266)
Q Consensus 161 ~v~iiaSG~lSH 172 (266)
+++++|||+.+.
T Consensus 87 ~~~vfg~G~~~y 98 (148)
T 3f6r_A 87 KVAAFASGDQEY 98 (148)
T ss_dssp EEEEEEEECTTS
T ss_pred EEEEEEeCCCCH
Confidence 999999998754
No 19
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=32.01 E-value=51 Score=21.00 Aligned_cols=25 Identities=16% Similarity=0.151 Sum_probs=21.9
Q ss_pred CeEEEEecCCCChHHHHHHHHHhccc
Q 024528 132 PVCQLSVQTRKDGTHHYNMGKALAPL 157 (266)
Q Consensus 132 PvV~vs~~~~~~~~~~~~lG~aL~~~ 157 (266)
|+|+|.+ .+.+.++--+|-++|.++
T Consensus 1 P~I~I~~-~grt~eqK~~L~~~it~~ 25 (62)
T 3m20_A 1 PVLIVYG-PKLDVGKKREFVERLTSV 25 (62)
T ss_dssp CEEEEEC-SCCCHHHHHHHHHHHHHH
T ss_pred CEEEEEE-CCCCHHHHHHHHHHHHHH
Confidence 8999999 889999988888887776
No 20
>3giu_A Pyrrolidone-carboxylate peptidase; IDP00836, hydrolase, PROT thiol protease, structural genomics; HET: MSE PG4; 1.25A {Staphylococcus aureus subsp} SCOP: c.56.4.0
Probab=31.91 E-value=2e+02 Score=23.55 Aligned_cols=110 Identities=15% Similarity=0.135 Sum_probs=54.2
Q ss_pred HHHHHHHHHHhhcCCCCEEEEEeCCCCCCCCe---EEeccCCCcccCCCCC-ccccccc------cCCCCCCHHHHHHHH
Q 024528 26 RHFLKAWKEQVFTQRPNSILVISGHWETDVPT---VNVVQQNDVIYDFYNF-PEQMYKL------KYPAPGAPELAKRVK 95 (266)
Q Consensus 26 ~~~~~~l~~~i~~~~Pd~IvviS~Hw~~~~~~---i~~~~~~~~~~Df~gf-p~~~y~~------~y~~~g~~eLa~~i~ 95 (266)
.+..+.+.+.+.+.+||.||.++-|--..... +..+...-.+-|-.|+ |.. -.+ .|...-+ .++++
T Consensus 48 ~~~~~~l~~~i~~~~Pd~Vi~vG~a~gr~~i~lEr~A~N~~~~~~pDn~G~~p~~-~~i~~~gp~~~~stLp---v~~iv 123 (215)
T 3giu_A 48 KKVDNIINKTLASNHYDVVLAIGQAGGRNAITPERVAINIDDARIPDNDDFQPID-QAIHLDGAPAYFSNLP---VKAMT 123 (215)
T ss_dssp HHHHHHHHHHHHHSCCSEEEEEEECTTCCSBEEBCEEESCEECSSCCTTSCCCEE-ECSCTTSCSEEECCSC---HHHHH
T ss_pred HhHHHHHHHHHHHhCCCEEEEeccCCCCceEEEEEEEeccCCCCCCCCCCCCCCC-CcccCCCccccccCCC---HHHHH
Confidence 34555666667778999999997765433322 2221111112222232 110 000 0122222 36788
Q ss_pred HHHHhCCCCcccccCCCC---ccccchhhhhhhccC-CCCCeEEEEecC
Q 024528 96 QLLTESGFNHVNEDTKRG---LDHGAWVPLMLMYPE-ANIPVCQLSVQT 140 (266)
Q Consensus 96 ~~l~~~g~d~~~~~~~~~---lDHG~~vPL~~l~p~-~~iPvV~vs~~~ 140 (266)
+.++++|+ ++..+.+-| =+|=.+.-|++.... .+++.+=|-++.
T Consensus 124 ~~l~~~gi-pa~vS~dAG~yvCN~i~Y~sL~~~~~~~~~~~~gFIHVP~ 171 (215)
T 3giu_A 124 QSIINQGL-PGALSNSAGTFVCNHTLYHLGYLQDKHYPHLRFGFIHVPY 171 (215)
T ss_dssp HHHHHTTC-CBCCBSCCCSSHHHHHHHHHHHHHHHTCTTCEEEEEEECC
T ss_pred HHHHHcCC-CEEEeCCCCccccHHHHHHHHHHHHhcCCCceEEEEEeCC
Confidence 88899999 576554332 133333344444322 356666666653
No 21
>3ro0_A Pyrrolidone-carboxylate peptidase; hydrolase-hydrolase inhibitor complex; HET: TPT; 1.50A {Bacillus amyloliquefaciens} SCOP: c.56.4.1 PDB: 3rnz_A* 1aug_A
Probab=30.95 E-value=2.3e+02 Score=23.45 Aligned_cols=80 Identities=16% Similarity=0.132 Sum_probs=40.3
Q ss_pred HHHHHHHHHhhcCCCCEEEEEeCCCCCCCCe---EEeccCCCcccCCCCC-ccccccc------cCCCCCCHHHHHHHHH
Q 024528 27 HFLKAWKEQVFTQRPNSILVISGHWETDVPT---VNVVQQNDVIYDFYNF-PEQMYKL------KYPAPGAPELAKRVKQ 96 (266)
Q Consensus 27 ~~~~~l~~~i~~~~Pd~IvviS~Hw~~~~~~---i~~~~~~~~~~Df~gf-p~~~y~~------~y~~~g~~eLa~~i~~ 96 (266)
+..+.+.+.+.+.+||.||.++-+--..... +..+...-.+-|-.|+ |.. -.+ .|...-+ .+++++
T Consensus 49 ~~~~~l~~~i~~~~Pd~VihvG~aggr~~i~lEr~A~N~~d~ripDn~G~~P~d-~~i~~~Gp~a~~stLp---v~~~v~ 124 (223)
T 3ro0_A 49 KSLAVLREAMKKHQPDIIICVGQAGGRMQITPERVAINLNEARIPDNEGNQPVG-EDISQGGPAAYWTGLP---IKRIVE 124 (223)
T ss_dssp HHHHHHHHHHHHHCCSEEEEEEECTTCCSBEEBSEEESCBCCSSCCTTSCCCCS-BCSSTTSCSEEECCSC---HHHHHH
T ss_pred hHHHHHHHHHHHhCCCEEEEeccCCCCceEEEEEEEecCCCCCCCCCCCCCCCC-CCCcCCCCceeecCCC---HHHHHH
Confidence 3444555556667999999998875443322 2222111112232232 110 000 0112222 367888
Q ss_pred HHHhCCCCcccccCC
Q 024528 97 LLTESGFNHVNEDTK 111 (266)
Q Consensus 97 ~l~~~g~d~~~~~~~ 111 (266)
.++++|+ ++..+.+
T Consensus 125 ~l~~~gi-pa~vS~d 138 (223)
T 3ro0_A 125 EIKKEGI-PAAVSYT 138 (223)
T ss_dssp HHHHTTC-CBCCBSC
T ss_pred HHHHCCC-CEEEeCC
Confidence 8999999 4765543
No 22
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=26.68 E-value=1.4e+02 Score=21.57 Aligned_cols=74 Identities=15% Similarity=0.115 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHhCCCCcccccCCCCccccchhhhhhhccCCCCCeEEEEecC---CCChH-HHHHHHHHhcc-ccCCCe
Q 024528 88 PELAKRVKQLLTESGFNHVNEDTKRGLDHGAWVPLMLMYPEANIPVCQLSVQT---RKDGT-HHYNMGKALAP-LKDEGV 162 (266)
Q Consensus 88 ~eLa~~i~~~l~~~g~d~~~~~~~~~lDHG~~vPL~~l~p~~~iPvV~vs~~~---~~~~~-~~~~lG~aL~~-~~d~~v 162 (266)
..+|+.|.+.+.+.|++ +....-...+ + .-+ .+...|-+..+. ...|. ....+=+.|.. +..+++
T Consensus 13 ~~iA~~ia~~l~~~g~~-v~~~~~~~~~-----~-~~l---~~~d~iiig~pty~~g~~p~~~~~~fl~~l~~~l~~k~~ 82 (138)
T 5nul_A 13 EKMAELIAKGIIESGKD-VNTINVSDVN-----I-DEL---LNEDILILGCSAMTDEVLEESEFEPFIEEISTKISGKKV 82 (138)
T ss_dssp HHHHHHHHHHHHHTTCC-CEEEEGGGCC-----H-HHH---TTCSEEEEEECCBTTTBCCTTTHHHHHHHHGGGCTTCEE
T ss_pred HHHHHHHHHHHHHCCCe-EEEEEhhhCC-----H-HHH---hhCCEEEEEcCccCCCCCChHHHHHHHHHHHhhcCCCEE
Confidence 46889999999998884 4321101111 0 011 234445554443 22232 22222233333 667899
Q ss_pred EEEEecCCc
Q 024528 163 LIIGSGSAT 171 (266)
Q Consensus 163 ~iiaSG~lS 171 (266)
+++||++.+
T Consensus 83 ~~f~t~g~~ 91 (138)
T 5nul_A 83 ALFGSYGWG 91 (138)
T ss_dssp EEEEEESSS
T ss_pred EEEEecCCC
Confidence 999998754
No 23
>4hps_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 1.55A {Xenorhabdus bovienii} PDB: 4gxh_A
Probab=25.79 E-value=1.8e+02 Score=24.21 Aligned_cols=28 Identities=11% Similarity=0.063 Sum_probs=19.5
Q ss_pred HHHHHHHHHhhcCCCCEEEEEeCCCCCC
Q 024528 27 HFLKAWKEQVFTQRPNSILVISGHWETD 54 (266)
Q Consensus 27 ~~~~~l~~~i~~~~Pd~IvviS~Hw~~~ 54 (266)
+..+.+.+.+.+.+||.||.++-+--..
T Consensus 70 ~~~~~l~~~i~~~~Pd~VihvG~aggr~ 97 (228)
T 4hps_A 70 TSLEHLYAAVDKYQPELVISVGQAGGRT 97 (228)
T ss_dssp HHHHHHHHHHHHHCCSEEEEEEECTTCS
T ss_pred HHHHHHHHHHHhhCCCEEEEeccCCCCc
Confidence 3445555556677999999998875443
No 24
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=25.20 E-value=2.3e+02 Score=22.93 Aligned_cols=79 Identities=6% Similarity=-0.074 Sum_probs=44.0
Q ss_pred CCCCHHHHHHHHHHHHhCCCCcccccCCCCccccchhhhhhhccCCCCCeEEEEecCCC---------ChHHHHHHHHHh
Q 024528 84 APGAPELAKRVKQLLTESGFNHVNEDTKRGLDHGAWVPLMLMYPEANIPVCQLSVQTRK---------DGTHHYNMGKAL 154 (266)
Q Consensus 84 ~~g~~eLa~~i~~~l~~~g~d~~~~~~~~~lDHG~~vPL~~l~p~~~iPvV~vs~~~~~---------~~~~~~~lG~aL 154 (266)
...+++-...+.+.+.+.++|-+.... .+. ..++.-...+..+|||.+.-.... +.+-.+..++.|
T Consensus 46 ~~~~~~~~~~~~~~l~~~~vdgiIi~~---~~~--~~~~~~~~~~~~iPvV~~~~~~~~~~~~~V~~D~~~~g~~a~~~L 120 (291)
T 3egc_A 46 TAEDIVREREAVGQFFERRVDGLILAP---SEG--EHDYLRTELPKTFPIVAVNRELRIPGCGAVLSENVRGARTAVEYL 120 (291)
T ss_dssp CTTCHHHHHHHHHHHHHTTCSEEEECC---CSS--CCHHHHHSSCTTSCEEEESSCCCCTTCEEEEECHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEeC---CCC--ChHHHHHhhccCCCEEEEecccCCCCCCEEEECcHHHHHHHHHHH
Confidence 344666667777788888887222211 111 112222234568999887653221 124455666666
Q ss_pred ccccCCCeEEEEe
Q 024528 155 APLKDEGVLIIGS 167 (266)
Q Consensus 155 ~~~~d~~v~iiaS 167 (266)
.+...++|++|+.
T Consensus 121 ~~~G~~~i~~i~~ 133 (291)
T 3egc_A 121 IARGHTRIGAIVG 133 (291)
T ss_dssp HHTTCCSEEEECS
T ss_pred HHcCCCEEEEEeC
Confidence 6655688998864
No 25
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=25.15 E-value=1e+02 Score=28.19 Aligned_cols=70 Identities=14% Similarity=0.169 Sum_probs=46.8
Q ss_pred ccCCCCCCHHHHHHHHHHHHhCCCCcccccCCCCccccchhhhhhhccC--CCCC-eEEEEecCCCChHHHHHHHHHhcc
Q 024528 80 LKYPAPGAPELAKRVKQLLTESGFNHVNEDTKRGLDHGAWVPLMLMYPE--ANIP-VCQLSVQTRKDGTHHYNMGKALAP 156 (266)
Q Consensus 80 ~~y~~~g~~eLa~~i~~~l~~~g~d~~~~~~~~~lDHG~~vPL~~l~p~--~~iP-vV~vs~~~~~~~~~~~~lG~aL~~ 156 (266)
+-+-++|++++...|.+.+++.|+ ++....+. +++. |.+|. .+-| +|-|| ..+.+|.....+-+.|.+
T Consensus 75 lVi~at~~~~~n~~i~~~a~~~~i-~vn~~d~~--e~~~-----~~~pa~~~~~~l~iaIs-T~Gksp~la~~ir~~ie~ 145 (457)
T 1pjq_A 75 LAIAATDDDTVNQRVSDAAESRRI-FCNVVDAP--KAAS-----FIMPSIIDRSPLMVAVS-SGGTSPVLARLLREKLES 145 (457)
T ss_dssp EEEECCSCHHHHHHHHHHHHHTTC-EEEETTCT--TSSS-----EECCEEEEETTEEEEEE-CTTSCHHHHHHHHHHHHH
T ss_pred EEEEcCCCHHHHHHHHHHHHHcCC-EEEECCCc--ccCc-----eEeeeEEEeCCeEEEEE-CCCCChHHHHHHHHHHHH
Confidence 446789999999999999999999 66432222 2322 23343 2456 77888 456788776666666666
Q ss_pred cc
Q 024528 157 LK 158 (266)
Q Consensus 157 ~~ 158 (266)
+.
T Consensus 146 ~l 147 (457)
T 1pjq_A 146 LL 147 (457)
T ss_dssp HS
T ss_pred hc
Confidence 54
No 26
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=24.76 E-value=2.2e+02 Score=22.89 Aligned_cols=77 Identities=12% Similarity=0.113 Sum_probs=39.9
Q ss_pred CHHHHHHHHHHHHhCCCCcccccCCCCccccchhhhhhhccCCCCCeEEEEecCC---------CChHHHHHHHHHhccc
Q 024528 87 APELAKRVKQLLTESGFNHVNEDTKRGLDHGAWVPLMLMYPEANIPVCQLSVQTR---------KDGTHHYNMGKALAPL 157 (266)
Q Consensus 87 ~~eLa~~i~~~l~~~g~d~~~~~~~~~lDHG~~vPL~~l~p~~~iPvV~vs~~~~---------~~~~~~~~lG~aL~~~ 157 (266)
+.+.-..+.+.+.+.++|-+... +.+. .+..-...+..+|||-+.-... .+.+-.+..++.|.+.
T Consensus 48 ~~~~~~~~~~~l~~~~vdgiIi~---~~~~---~~~~~~l~~~~iPvV~i~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~ 121 (276)
T 3jy6_A 48 DIEREKTLLRAIGSRGFDGLILQ---SFSN---PQTVQEILHQQMPVVSVDREMDACPWPQVVTDNFEAAKAATTAFRQQ 121 (276)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEE---SSCC---HHHHHHHHTTSSCEEEESCCCTTCSSCEEECCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHhCCCCEEEEe---cCCc---HHHHHHHHHCCCCEEEEecccCCCCCCEEEEChHHHHHHHHHHHHHc
Confidence 44445556666666666522111 1111 1222222346788877754321 1124455666666665
Q ss_pred cCCCeEEEEecC
Q 024528 158 KDEGVLIIGSGS 169 (266)
Q Consensus 158 ~d~~v~iiaSG~ 169 (266)
-.++|++|+...
T Consensus 122 G~~~I~~i~~~~ 133 (276)
T 3jy6_A 122 GYQHVVVLTSEL 133 (276)
T ss_dssp TCCEEEEEEECS
T ss_pred CCCeEEEEecCC
Confidence 568899887643
No 27
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=24.13 E-value=83 Score=23.02 Aligned_cols=31 Identities=13% Similarity=0.258 Sum_probs=20.2
Q ss_pred ceEEEEcCCCCCCCCCCCchHHHHHHHHHHHhhcCCC
Q 024528 5 KNTFFISHGSPTLSIDESLPARHFLKAWKEQVFTQRP 41 (266)
Q Consensus 5 ~~~~fisHg~P~~~~~~~~~~~~~~~~l~~~i~~~~P 41 (266)
..+++++||+. ...+.+.++++.+.+++..|
T Consensus 4 ~alllv~HGS~------~~~~~~~~~~la~~l~~~~~ 34 (133)
T 2xws_A 4 RGLVIVGHGSQ------LNHYREVMELHRKRIEESGA 34 (133)
T ss_dssp EEEEEEECSCC------CHHHHHHHHHHHHHHHHHTS
T ss_pred ceEEEEECCCC------CHHHHHHHHHHHHHHHhhCC
Confidence 46889999972 22345567777777764433
No 28
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=23.21 E-value=2.7e+02 Score=22.45 Aligned_cols=82 Identities=12% Similarity=0.101 Sum_probs=44.8
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCcccccCCCCcccc---chhhhhhhccCCCCCeEEEEecCCC---------ChHHHHHH
Q 024528 83 PAPGAPELAKRVKQLLTESGFNHVNEDTKRGLDHG---AWVPLMLMYPEANIPVCQLSVQTRK---------DGTHHYNM 150 (266)
Q Consensus 83 ~~~g~~eLa~~i~~~l~~~g~d~~~~~~~~~lDHG---~~vPL~~l~p~~~iPvV~vs~~~~~---------~~~~~~~l 150 (266)
....+++--..+.+.+.+.++|-+... +.+.. ...++.-...+..+|||-+.-.... +.+-.+..
T Consensus 52 ~~~~~~~~~~~~~~~l~~~~vdgiIi~---~~~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a 128 (298)
T 3tb6_A 52 STNNNPDNERRGLENLLSQHIDGLIVE---PTKSALQTPNIGYYLNLEKNGIPFAMINASYAELAAPSFTLDDVKGGMMA 128 (298)
T ss_dssp ECTTCHHHHHHHHHHHHHTCCSEEEEC---CSSTTSCCTTHHHHHHHHHTTCCEEEESSCCTTCSSCEEEECHHHHHHHH
T ss_pred eCCCChHHHHHHHHHHHHCCCCEEEEe---cccccccCCcHHHHHHHHhcCCCEEEEecCcCCCCCCEEEeCcHHHHHHH
Confidence 344577777777788878888722221 12221 1112222223468998887643211 12445566
Q ss_pred HHHhccccCCCeEEEEe
Q 024528 151 GKALAPLKDEGVLIIGS 167 (266)
Q Consensus 151 G~aL~~~~d~~v~iiaS 167 (266)
++.|.+.-.++|++|+.
T Consensus 129 ~~~L~~~G~~~i~~i~~ 145 (298)
T 3tb6_A 129 AEHLLSLGHTHMMGIFK 145 (298)
T ss_dssp HHHHHHTTCCSEEEEEE
T ss_pred HHHHHHCCCCcEEEEcC
Confidence 66666655688998864
No 29
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=22.78 E-value=2.7e+02 Score=22.77 Aligned_cols=74 Identities=18% Similarity=0.109 Sum_probs=37.3
Q ss_pred CHHHHHHHHHHHHhCCCCccccc--CCCCccccchhhhhhhccCCCCCeEEEEecC--CCChHHHHHHHHHhcc----cc
Q 024528 87 APELAKRVKQLLTESGFNHVNED--TKRGLDHGAWVPLMLMYPEANIPVCQLSVQT--RKDGTHHYNMGKALAP----LK 158 (266)
Q Consensus 87 ~~eLa~~i~~~l~~~g~d~~~~~--~~~~lDHG~~vPL~~l~p~~~iPvV~vs~~~--~~~~~~~~~lG~aL~~----~~ 158 (266)
..++|++|.+.+ +.|++ +... .+..++. + ++ .-+||-++... +..|.....|=+.|.. +.
T Consensus 54 te~~A~~La~~l-~~g~~-v~v~~l~~~~~~~--------l-~~-~~~vI~~tsTyG~Ge~Pdna~~F~~~L~~~~~~l~ 121 (219)
T 3hr4_A 54 SEALAWDLGALF-SCAFN-PKVVCMDKYRLSC--------L-EE-ERLLLVVTSTFGNGDCPGNGEKLKKSLFMLKELNN 121 (219)
T ss_dssp HHHHHHHHHHHH-TTTSE-EEEEEGGGCCGGG--------G-GT-CSEEEEEEECBTTTBCCGGGHHHHHHHHHCCCCSS
T ss_pred HHHHHHHHHHHH-HcCCC-eEEEEcccCCHhH--------h-cc-CCeEEEEEeccCCCcCCHHHHHHHHHHHhcchhhc
Confidence 345788888887 57774 4321 1111111 1 12 22344444322 2233333333333332 34
Q ss_pred CCCeEEEEecCCcc
Q 024528 159 DEGVLIIGSGSATH 172 (266)
Q Consensus 159 d~~v~iiaSG~lSH 172 (266)
..+++|+|+|+.+-
T Consensus 122 ~~~~aVfGlGdssY 135 (219)
T 3hr4_A 122 KFRYAVFGLGSSMY 135 (219)
T ss_dssp CCEEEEEEEECTTS
T ss_pred CCEEEEEeCCCcch
Confidence 67899999999863
No 30
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=22.74 E-value=90 Score=22.79 Aligned_cols=32 Identities=16% Similarity=0.238 Sum_probs=18.9
Q ss_pred CCCcceEEEEcCCCCCCCCCCCchHHHHHHHHHHHhhc
Q 024528 1 MSTVKNTFFISHGSPTLSIDESLPARHFLKAWKEQVFT 38 (266)
Q Consensus 1 M~~~~~~~fisHg~P~~~~~~~~~~~~~~~~l~~~i~~ 38 (266)
|..-..+++++||+. ...+.+.++++.+++++
T Consensus 2 m~~~~alllv~HGS~------~~~~~~~~~~l~~~l~~ 33 (126)
T 3lyh_A 2 MTQPHQIILLAHGSS------DARWCETFEKLAEPTVE 33 (126)
T ss_dssp ---CEEEEEEECCCS------CHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEEeCCCC------CHHHHHHHHHHHHHHHh
Confidence 444457899999973 22345567777766653
No 31
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=22.69 E-value=1e+02 Score=25.49 Aligned_cols=77 Identities=10% Similarity=0.075 Sum_probs=37.8
Q ss_pred CHHHHHHHHHHHHhCCCCcccccCCCCccccchhhhhhhccCCCCCeEEEEecCCC-------------ChHHHHHHHHH
Q 024528 87 APELAKRVKQLLTESGFNHVNEDTKRGLDHGAWVPLMLMYPEANIPVCQLSVQTRK-------------DGTHHYNMGKA 153 (266)
Q Consensus 87 ~~eLa~~i~~~l~~~g~d~~~~~~~~~lDHG~~vPL~~l~p~~~iPvV~vs~~~~~-------------~~~~~~~lG~a 153 (266)
+++--....+.+.+.++|-+.. .+.|...+.+..-...+..+|||.+.-.... +.+-.+..++.
T Consensus 46 ~~~~~~~~i~~l~~~~vdgiii---~~~~~~~~~~~~~~~~~~giPvV~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~ 122 (297)
T 3rot_A 46 DVPKQVQFIESALATYPSGIAT---TIPSDTAFSKSLQRANKLNIPVIAVDTRPKDKTKNPYLVFLGSDNLLAGKKLGEK 122 (297)
T ss_dssp CHHHHHHHHHHHHHTCCSEEEE---CCCCSSTTHHHHHHHHHHTCCEEEESCCCSCTTTSCCSCEEECCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE---eCCCHHHHHHHHHHHHHCCCCEEEEcCCCccccccCcceEEccChHHHHHHHHHH
Confidence 4444445555555666652211 1223332233222222346777766542211 12445666666
Q ss_pred hcccc--CCCeEEEE
Q 024528 154 LAPLK--DEGVLIIG 166 (266)
Q Consensus 154 L~~~~--d~~v~iia 166 (266)
|.+.. .++|++|+
T Consensus 123 l~~~g~~~~~i~~i~ 137 (297)
T 3rot_A 123 ALELTPSAKRALVLN 137 (297)
T ss_dssp HHHHCTTCCEEEEEE
T ss_pred HHHhcCCCceEEEEe
Confidence 66665 57888886
No 32
>4gxh_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 2.70A {Xenorhabdus bovienii}
Probab=21.75 E-value=1.4e+02 Score=24.48 Aligned_cols=104 Identities=15% Similarity=0.116 Sum_probs=51.6
Q ss_pred HHHHHHHHHhhcCCCCEEEEEeCCCCCCCCe---EEeccCCCcccCCCCC-----------ccccccccCCCCCCHHHHH
Q 024528 27 HFLKAWKEQVFTQRPNSILVISGHWETDVPT---VNVVQQNDVIYDFYNF-----------PEQMYKLKYPAPGAPELAK 92 (266)
Q Consensus 27 ~~~~~l~~~i~~~~Pd~IvviS~Hw~~~~~~---i~~~~~~~~~~Df~gf-----------p~~~y~~~y~~~g~~eLa~ 92 (266)
+..+.+.+.+.+.+||.||.+.=+--..... +..+.....+=|-.|+ |.. | ...-+ .+
T Consensus 49 ~~~~~l~~~i~~~~Pd~vi~~G~a~gr~~i~~Er~A~N~~~~r~pDn~G~~p~~~~i~~~gp~~-~----~t~Lp---v~ 120 (216)
T 4gxh_A 49 TSLEHLYAAVDKYQPELVISVGQAGGRTNITVERVAININDARIPDNAGNQPIDTPVIVDGPAA-Y----FSRLP---IK 120 (216)
T ss_dssp HHHHHHHHHHHHHCCSEEEEEEECTTCSSEEEECEEESCBCCSSCCTTSCCCCSBCSSTTCCSE-E----ECCSC---HH
T ss_pred HHHHHHHHHHHhhCCCEEEEeccCCCCCcceeEEEEcccCcccCCccCCCCCCCCcccCCCchh-e----ecCCC---HH
Confidence 4455566666678999999997654333221 2221111111122221 221 1 11112 56
Q ss_pred HHHHHHHhCCCCcccccCCCC---ccccchhhhhhhcc-CCCCCeEEEEec
Q 024528 93 RVKQLLTESGFNHVNEDTKRG---LDHGAWVPLMLMYP-EANIPVCQLSVQ 139 (266)
Q Consensus 93 ~i~~~l~~~g~d~~~~~~~~~---lDHG~~vPL~~l~p-~~~iPvV~vs~~ 139 (266)
++++.++++|+ ++..+.+-| =+|=.+.-|+++.. ..+++..=|-++
T Consensus 121 ~iv~~l~~~gi-pa~vS~dAG~ylCN~i~Y~sL~~~~~~~~~~~~gFIHVP 170 (216)
T 4gxh_A 121 TMVNALNTAGI-PASVSQTAGTFVCNHVMYGLLHYLAQNTPSVRGGFIHVP 170 (216)
T ss_dssp HHHHHHHHTTC-CEEEESCCCSSHHHHHHHHHHHHHHHHCTTSEEEEEEEC
T ss_pred HHHHHHHHCCC-CEEEeCCCcccHHHHHHHHHHHHHHHcCCCCeEEEEEcC
Confidence 78888999999 576554332 12222223444432 246776666665
No 33
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=21.02 E-value=1e+02 Score=23.67 Aligned_cols=31 Identities=13% Similarity=0.266 Sum_probs=19.1
Q ss_pred ceEEEEcCCCCCCCCCCCchHHHHHHHHHHHhhcCCC
Q 024528 5 KNTFFISHGSPTLSIDESLPARHFLKAWKEQVFTQRP 41 (266)
Q Consensus 5 ~~~~fisHg~P~~~~~~~~~~~~~~~~l~~~i~~~~P 41 (266)
..++++.||+.. ..+.+.++++.+++++..|
T Consensus 25 ~avlLv~HGS~~------p~~~~~~~~la~~l~~~~~ 55 (156)
T 1tjn_A 25 RGLVIVGHGSQL------NHYREVMELHRKRIEESGA 55 (156)
T ss_dssp EEEEEEECCTTS------TTHHHHHHHHHHHHHHHTS
T ss_pred cCEEEEECCCCC------HHHHHHHHHHHHHHHhhCC
Confidence 467899999732 1244566777766654433
No 34
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=20.56 E-value=84 Score=19.32 Aligned_cols=27 Identities=7% Similarity=0.239 Sum_probs=21.4
Q ss_pred CCeEEEEecCCCChHHHHHHHHHhccc
Q 024528 131 IPVCQLSVQTRKDGTHHYNMGKALAPL 157 (266)
Q Consensus 131 iPvV~vs~~~~~~~~~~~~lG~aL~~~ 157 (266)
.|.|.|.++.+.+.++--+|-++|.++
T Consensus 3 MP~i~i~~~~g~s~e~k~~l~~~l~~~ 29 (63)
T 2x4k_A 3 MPIVNVKLLEGRSDEQLKNLVSEVTDA 29 (63)
T ss_dssp CCEEEEEEESCCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 699999998888888777777766664
No 35
>1x10_A Pyrrolidone-carboxylate peptidase; stability of protein, hydrolase; 2.00A {Pyrococcus furiosus} PDB: 1z8t_A 1z8x_A 1ioi_A 1x12_A 1z8w_A 2eo8_A 1iof_A 2df5_A
Probab=20.06 E-value=2.9e+02 Score=22.37 Aligned_cols=28 Identities=4% Similarity=-0.014 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhcCCCCEEEEEeCCCCCC
Q 024528 27 HFLKAWKEQVFTQRPNSILVISGHWETD 54 (266)
Q Consensus 27 ~~~~~l~~~i~~~~Pd~IvviS~Hw~~~ 54 (266)
++.+.+.+.+.+.+||.||.++=|--..
T Consensus 47 ~~~~~l~~~~~~~~pd~vi~vG~a~gr~ 74 (208)
T 1x10_A 47 KAKEVLEKTLEEIKPDIAIHVGLAPGRS 74 (208)
T ss_dssp HHHHHHHHHHHHHCCSEEEEEEECTTCC
T ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCc
Confidence 3344555555567999999998765433
Done!