Query 024531
Match_columns 266
No_of_seqs 237 out of 3216
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 09:54:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024531.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024531hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2if4_A ATFKBP42; FKBP-like, al 100.0 1.9E-34 6.4E-39 249.8 19.5 238 2-239 98-335 (338)
2 1p5q_A FKBP52, FK506-binding p 100.0 3.3E-29 1.1E-33 216.6 26.2 225 2-232 68-294 (336)
3 1kt0_A FKBP51, 51 kDa FK506-bi 100.0 5.8E-29 2E-33 223.6 24.8 231 2-238 189-421 (457)
4 3rkv_A Putative peptidylprolyl 99.9 1.4E-23 4.6E-28 162.0 11.9 156 76-231 4-161 (162)
5 4gco_A Protein STI-1; structur 99.9 2.6E-22 8.9E-27 149.0 15.6 115 80-211 10-124 (126)
6 2fbn_A 70 kDa peptidylprolyl i 99.9 1.2E-20 4E-25 150.2 16.9 174 59-236 17-190 (198)
7 2hr2_A Hypothetical protein; a 99.9 4.2E-21 1.5E-25 146.6 12.0 142 74-220 2-154 (159)
8 1kt0_A FKBP51, 51 kDa FK506-bi 99.8 1.7E-21 5.8E-26 175.0 8.9 233 2-239 80-387 (457)
9 1ihg_A Cyclophilin 40; ppiase 99.8 4.7E-19 1.6E-23 154.9 16.9 156 75-231 215-370 (370)
10 4gcn_A Protein STI-1; structur 99.8 5.2E-19 1.8E-23 131.1 13.3 115 79-211 4-125 (127)
11 3upv_A Heat shock protein STI1 99.8 9.6E-19 3.3E-23 128.7 14.0 117 81-214 2-124 (126)
12 3gyz_A Chaperone protein IPGC; 99.8 4.3E-18 1.5E-22 130.1 14.6 106 80-202 33-138 (151)
13 3sz7_A HSC70 cochaperone (SGT) 99.8 9.9E-18 3.4E-22 129.1 14.7 120 81-217 9-130 (164)
14 4ga2_A E3 SUMO-protein ligase 99.8 7.6E-19 2.6E-23 134.0 7.9 131 89-236 3-133 (150)
15 2xcb_A PCRH, regulatory protei 99.8 1.3E-17 4.4E-22 125.6 14.1 123 80-219 15-137 (142)
16 4ga2_A E3 SUMO-protein ligase 99.8 3.2E-18 1.1E-22 130.5 10.3 117 80-213 28-145 (150)
17 2vgx_A Chaperone SYCD; alterna 99.8 1.8E-17 6E-22 126.2 13.8 120 80-216 18-137 (148)
18 4gyw_A UDP-N-acetylglucosamine 99.7 2.2E-17 7.7E-22 155.5 15.0 139 80-236 6-144 (723)
19 3q49_B STIP1 homology and U bo 99.7 4.6E-17 1.6E-21 120.9 12.7 121 82-219 8-133 (137)
20 3urz_A Uncharacterized protein 99.7 2E-16 6.8E-21 126.9 17.1 147 83-230 4-151 (208)
21 2pl2_A Hypothetical conserved 99.7 8E-17 2.7E-21 130.1 12.4 131 85-234 41-182 (217)
22 1elw_A TPR1-domain of HOP; HOP 99.7 1E-15 3.5E-20 109.6 15.0 114 82-212 3-116 (118)
23 4i17_A Hypothetical protein; T 99.7 9.9E-16 3.4E-20 123.8 16.5 134 84-235 8-149 (228)
24 1a17_A Serine/threonine protei 99.7 4.1E-15 1.4E-19 113.4 18.5 118 77-211 7-124 (166)
25 2vyi_A SGTA protein; chaperone 99.7 1.9E-15 6.4E-20 110.2 15.4 123 77-216 6-128 (131)
26 2pl2_A Hypothetical conserved 99.7 9.4E-16 3.2E-20 123.7 14.7 88 134-222 118-205 (217)
27 1hxi_A PEX5, peroxisome target 99.7 3.3E-16 1.1E-20 115.0 10.5 102 85-203 19-120 (121)
28 3vtx_A MAMA; tetratricopeptide 99.7 1.3E-15 4.5E-20 118.9 14.7 151 82-233 4-171 (184)
29 2xev_A YBGF; tetratricopeptide 99.7 2.7E-15 9.3E-20 110.0 14.5 116 85-214 4-122 (129)
30 4gyw_A UDP-N-acetylglucosamine 99.7 6.6E-16 2.2E-20 145.5 13.7 125 80-221 40-164 (723)
31 2h6f_A Protein farnesyltransfe 99.7 4.3E-16 1.5E-20 136.6 11.6 122 80-218 94-216 (382)
32 2lni_A Stress-induced-phosphop 99.7 1.4E-15 4.7E-20 111.6 12.6 116 82-214 15-130 (133)
33 2dba_A Smooth muscle cell asso 99.7 2.6E-15 8.8E-20 112.3 14.1 116 83-212 28-143 (148)
34 1elr_A TPR2A-domain of HOP; HO 99.6 4.1E-15 1.4E-19 108.5 13.7 119 81-217 2-127 (131)
35 2h6f_A Protein farnesyltransfe 99.6 1.9E-15 6.6E-20 132.5 12.4 138 81-235 129-272 (382)
36 1zu2_A Mitochondrial import re 99.6 1.2E-15 4E-20 116.2 9.5 103 95-214 14-137 (158)
37 3gyz_A Chaperone protein IPGC; 99.6 3E-16 1E-20 119.8 5.7 118 100-235 19-136 (151)
38 3vtx_A MAMA; tetratricopeptide 99.6 1.1E-14 3.9E-19 113.5 14.6 123 81-203 37-176 (184)
39 4i17_A Hypothetical protein; T 99.6 1.1E-14 3.9E-19 117.6 14.7 118 84-218 43-169 (228)
40 2c2l_A CHIP, carboxy terminus 99.6 1.4E-14 4.8E-19 121.6 14.7 102 83-201 4-105 (281)
41 1na0_A Designed protein CTPR3; 99.6 4.3E-14 1.5E-18 101.9 15.3 114 83-213 9-122 (125)
42 3urz_A Uncharacterized protein 99.6 2.3E-14 7.8E-19 114.8 14.7 128 89-235 60-189 (208)
43 4gco_A Protein STI-1; structur 99.6 3E-15 1E-19 110.6 8.8 101 136-237 15-115 (126)
44 1hh8_A P67PHOX, NCF-2, neutrop 99.6 1.6E-14 5.5E-19 115.1 12.9 134 82-236 5-154 (213)
45 3k9i_A BH0479 protein; putativ 99.6 3.1E-15 1.1E-19 108.7 7.8 97 95-208 2-101 (117)
46 1wao_1 Serine/threonine protei 99.6 6E-15 2E-19 133.0 10.3 129 81-227 4-134 (477)
47 2vgx_A Chaperone SYCD; alterna 99.6 4.4E-15 1.5E-19 112.8 7.8 116 103-236 7-122 (148)
48 3qky_A Outer membrane assembly 99.6 3.4E-14 1.1E-18 117.3 13.4 140 82-236 14-181 (261)
49 2vsy_A XCC0866; transferase, g 99.6 2.8E-14 9.5E-19 131.0 13.7 139 79-235 19-160 (568)
50 2yhc_A BAMD, UPF0169 lipoprote 99.6 5.9E-14 2E-18 113.6 13.4 110 83-206 4-134 (225)
51 3qky_A Outer membrane assembly 99.6 1.1E-13 3.8E-18 114.1 15.2 139 83-236 52-228 (261)
52 2fo7_A Synthetic consensus TPR 99.6 9.7E-14 3.3E-18 101.2 13.3 130 84-231 2-131 (136)
53 2e2e_A Formate-dependent nitri 99.5 1.3E-13 4.3E-18 107.0 14.5 113 82-211 43-158 (177)
54 2pzi_A Probable serine/threoni 99.5 3.4E-14 1.2E-18 133.4 12.3 145 83-248 433-577 (681)
55 3u4t_A TPR repeat-containing p 99.5 2.1E-13 7.1E-18 112.4 15.2 126 84-209 4-149 (272)
56 1xnf_A Lipoprotein NLPI; TPR, 99.5 3.3E-13 1.1E-17 111.1 16.1 133 80-231 40-172 (275)
57 2y4t_A DNAJ homolog subfamily 99.5 2.7E-13 9.3E-18 119.7 16.5 152 84-251 258-412 (450)
58 2kck_A TPR repeat; tetratricop 99.5 7.7E-14 2.6E-18 98.8 10.3 101 85-202 8-111 (112)
59 3as5_A MAMA; tetratricopeptide 99.5 2.2E-13 7.5E-18 105.0 13.7 131 83-231 42-172 (186)
60 3ieg_A DNAJ homolog subfamily 99.5 6.4E-13 2.2E-17 113.1 17.6 122 84-218 235-356 (359)
61 4abn_A Tetratricopeptide repea 99.5 1.6E-13 5.6E-18 123.5 14.6 133 83-234 102-252 (474)
62 3uq3_A Heat shock protein STI1 99.5 2.1E-13 7E-18 111.0 13.8 112 90-218 112-223 (258)
63 2xcb_A PCRH, regulatory protei 99.5 3.4E-14 1.2E-18 106.7 8.1 116 104-237 5-120 (142)
64 4abn_A Tetratricopeptide repea 99.5 2.8E-13 9.7E-18 121.9 15.1 123 84-223 171-313 (474)
65 3uq3_A Heat shock protein STI1 99.5 5E-13 1.7E-17 108.7 15.0 127 83-235 79-205 (258)
66 1w3b_A UDP-N-acetylglucosamine 99.5 3.2E-13 1.1E-17 117.4 14.6 97 136-233 273-369 (388)
67 2q7f_A YRRB protein; TPR, prot 99.5 1E-13 3.6E-18 112.0 10.7 133 82-232 56-188 (243)
68 3mkr_A Coatomer subunit epsilo 99.5 2.7E-13 9.1E-18 114.4 13.4 136 83-237 130-269 (291)
69 2pzi_A Probable serine/threoni 99.5 3.1E-14 1.1E-18 133.7 8.3 115 82-214 466-580 (681)
70 3as5_A MAMA; tetratricopeptide 99.5 3.6E-13 1.2E-17 103.8 12.5 135 82-234 7-141 (186)
71 2e2e_A Formate-dependent nitri 99.5 4.8E-14 1.7E-18 109.4 7.0 130 90-237 17-149 (177)
72 1w3b_A UDP-N-acetylglucosamine 99.5 6.4E-13 2.2E-17 115.5 14.8 153 82-235 168-337 (388)
73 1hh8_A P67PHOX, NCF-2, neutrop 99.5 5.5E-13 1.9E-17 106.1 13.3 103 83-202 37-155 (213)
74 2ho1_A Type 4 fimbrial biogene 99.5 1.9E-12 6.4E-17 105.5 16.7 99 135-234 106-206 (252)
75 4eqf_A PEX5-related protein; a 99.5 1.6E-13 5.3E-18 118.3 10.7 106 83-205 65-170 (365)
76 2q7f_A YRRB protein; TPR, prot 99.5 4.4E-13 1.5E-17 108.3 12.8 135 83-235 91-225 (243)
77 4eqf_A PEX5-related protein; a 99.5 2.5E-13 8.5E-18 117.0 12.0 129 89-235 183-313 (365)
78 3hym_B Cell division cycle pro 99.5 6.9E-13 2.4E-17 111.8 14.4 152 84-236 126-303 (330)
79 3u4t_A TPR repeat-containing p 99.5 4E-13 1.4E-17 110.7 12.4 128 89-233 80-209 (272)
80 2yhc_A BAMD, UPF0169 lipoprote 99.5 1.4E-12 4.6E-17 105.5 15.1 138 83-235 41-216 (225)
81 3ieg_A DNAJ homolog subfamily 99.5 5.6E-13 1.9E-17 113.4 13.4 110 83-209 3-115 (359)
82 2vq2_A PILW, putative fimbrial 99.5 1.3E-12 4.6E-17 103.9 14.4 151 83-234 8-178 (225)
83 3qou_A Protein YBBN; thioredox 99.5 7E-13 2.4E-17 111.5 13.1 143 82-242 116-258 (287)
84 2r5s_A Uncharacterized protein 99.5 6.9E-13 2.4E-17 103.1 12.1 140 84-242 7-147 (176)
85 1fch_A Peroxisomal targeting s 99.5 6.1E-13 2.1E-17 114.2 12.9 109 95-220 193-303 (368)
86 2ho1_A Type 4 fimbrial biogene 99.5 8.3E-13 2.9E-17 107.6 12.9 135 82-234 36-172 (252)
87 1qqe_A Vesicular transport pro 99.5 1.2E-12 3.9E-17 110.3 13.9 144 82-237 76-233 (292)
88 2vq2_A PILW, putative fimbrial 99.4 4.5E-12 1.5E-16 100.8 16.3 150 84-234 43-213 (225)
89 1hxi_A PEX5, peroxisome target 99.4 1.8E-12 6.2E-17 94.8 12.5 99 136-235 19-117 (121)
90 2l6j_A TPR repeat-containing p 99.4 7E-14 2.4E-18 99.5 4.4 95 82-193 3-103 (111)
91 4gcn_A Protein STI-1; structur 99.4 2.5E-13 8.6E-18 100.2 7.3 99 136-235 10-115 (127)
92 3hym_B Cell division cycle pro 99.4 2.9E-12 1E-16 107.9 14.9 130 84-231 91-221 (330)
93 3fp2_A TPR repeat-containing p 99.4 2.8E-12 9.5E-17 115.6 15.4 115 71-203 13-127 (537)
94 2y4t_A DNAJ homolog subfamily 99.4 2.3E-12 7.7E-17 113.8 14.5 115 79-210 22-139 (450)
95 2kat_A Uncharacterized protein 99.4 2.5E-12 8.4E-17 92.6 12.0 97 101-214 3-101 (115)
96 1fch_A Peroxisomal targeting s 99.4 1.7E-12 5.8E-17 111.4 13.1 107 83-206 64-170 (368)
97 3cv0_A Peroxisome targeting si 99.4 3.7E-12 1.3E-16 107.1 14.0 129 83-229 172-312 (327)
98 3upv_A Heat shock protein STI1 99.4 1.1E-12 3.7E-17 96.0 9.1 97 136-233 6-102 (126)
99 1qqe_A Vesicular transport pro 99.4 4.1E-12 1.4E-16 106.9 13.9 149 77-237 31-192 (292)
100 3sz7_A HSC70 cochaperone (SGT) 99.4 5.1E-12 1.7E-16 96.8 12.6 117 135-254 12-128 (164)
101 2gw1_A Mitochondrial precursor 99.4 5.6E-12 1.9E-16 112.8 14.4 108 79-204 2-109 (514)
102 1xnf_A Lipoprotein NLPI; TPR, 99.4 3.5E-12 1.2E-16 104.9 12.0 132 92-237 14-145 (275)
103 2fo7_A Synthetic consensus TPR 99.4 1.2E-11 4.2E-16 89.8 12.9 102 83-201 35-136 (136)
104 3edt_B KLC 2, kinesin light ch 99.4 8E-12 2.7E-16 102.6 13.2 137 80-231 40-197 (283)
105 2vsy_A XCC0866; transferase, g 99.4 3.1E-12 1.1E-16 117.3 11.4 122 96-235 2-123 (568)
106 2r5s_A Uncharacterized protein 99.3 4.5E-12 1.5E-16 98.4 9.9 135 76-229 33-170 (176)
107 3qou_A Protein YBBN; thioredox 99.3 4.9E-12 1.7E-16 106.3 10.3 124 83-223 151-276 (287)
108 1p5q_A FKBP52, FK506-binding p 99.3 7.1E-13 2.4E-17 114.1 4.7 124 96-237 126-264 (336)
109 3mkr_A Coatomer subunit epsilo 99.3 2.7E-11 9.1E-16 102.1 14.3 96 94-206 177-273 (291)
110 3fp2_A TPR repeat-containing p 99.3 1.3E-11 4.3E-16 111.3 12.8 154 78-233 238-408 (537)
111 2l6j_A TPR repeat-containing p 99.3 2E-11 6.9E-16 86.5 11.0 80 136-215 6-91 (111)
112 2hr2_A Hypothetical protein; a 99.3 9.6E-12 3.3E-16 94.8 9.5 99 136-235 13-134 (159)
113 2xpi_A Anaphase-promoting comp 99.3 5.4E-11 1.8E-15 108.8 16.2 132 83-232 373-504 (597)
114 1na3_A Designed protein CTPR2; 99.3 2.4E-11 8.3E-16 82.9 10.5 78 136-213 11-88 (91)
115 2kck_A TPR repeat; tetratricop 99.3 1.1E-11 3.8E-16 87.5 9.0 99 136-235 8-109 (112)
116 3q49_B STIP1 homology and U bo 99.3 1.5E-11 5.2E-16 90.7 9.7 99 136-235 11-109 (137)
117 3ro3_A PINS homolog, G-protein 99.3 3.6E-11 1.2E-15 90.2 11.9 131 80-221 6-148 (164)
118 3cv0_A Peroxisome targeting si 99.3 1.7E-11 5.9E-16 103.0 11.1 126 92-235 147-272 (327)
119 2xpi_A Anaphase-promoting comp 99.3 4.7E-11 1.6E-15 109.2 14.5 153 83-236 407-583 (597)
120 3edt_B KLC 2, kinesin light ch 99.3 2.6E-11 9E-16 99.5 11.5 104 80-197 82-198 (283)
121 3u3w_A Transcriptional activat 99.3 1.9E-11 6.6E-16 102.6 10.7 137 83-230 115-264 (293)
122 3ulq_A Response regulator aspa 99.3 4.8E-11 1.6E-15 103.7 13.4 140 81-231 141-292 (383)
123 4g1t_A Interferon-induced prot 99.3 6.3E-11 2.1E-15 105.3 14.4 125 83-215 51-185 (472)
124 3ma5_A Tetratricopeptide repea 99.2 4.7E-11 1.6E-15 84.0 9.8 75 136-210 9-85 (100)
125 3rkv_A Putative peptidylprolyl 99.2 1.2E-11 4E-16 94.5 7.2 101 135-236 12-130 (162)
126 2ifu_A Gamma-SNAP; membrane fu 99.2 3.7E-11 1.3E-15 101.7 10.9 141 82-236 75-227 (307)
127 2gw1_A Mitochondrial precursor 99.2 2.8E-11 9.6E-16 108.2 10.7 99 136-235 374-481 (514)
128 1na3_A Designed protein CTPR2; 99.2 7.8E-11 2.7E-15 80.3 10.6 84 82-182 8-91 (91)
129 2kc7_A BFR218_protein; tetratr 99.2 1E-11 3.5E-16 86.7 6.0 69 137-205 3-72 (99)
130 4a1s_A PINS, partner of inscut 99.2 9.6E-11 3.3E-15 102.2 13.4 125 80-217 45-181 (411)
131 3q15_A PSP28, response regulat 99.2 8.1E-11 2.8E-15 102.2 12.3 144 81-235 139-293 (378)
132 1elw_A TPR1-domain of HOP; HOP 99.2 1.3E-10 4.4E-15 82.5 11.4 99 136-235 6-104 (118)
133 2qfc_A PLCR protein; TPR, HTH, 99.2 1.3E-10 4.3E-15 97.6 12.9 97 134-230 155-264 (293)
134 2xev_A YBGF; tetratricopeptide 99.2 6.3E-11 2.1E-15 86.3 9.3 99 136-235 4-108 (129)
135 3nf1_A KLC 1, kinesin light ch 99.2 7.9E-11 2.7E-15 98.2 11.1 104 80-197 108-224 (311)
136 2fbn_A 70 kDa peptidylprolyl i 99.2 2.1E-11 7.2E-16 96.3 7.1 101 135-236 39-155 (198)
137 3ulq_A Response regulator aspa 99.2 1.9E-10 6.3E-15 100.0 13.8 109 80-199 181-295 (383)
138 3q15_A PSP28, response regulat 99.2 3.2E-10 1.1E-14 98.5 14.7 109 81-200 180-293 (378)
139 2lni_A Stress-induced-phosphop 99.2 1E-10 3.4E-15 85.2 9.6 100 134-234 16-115 (133)
140 3nf1_A KLC 1, kinesin light ch 99.2 1.8E-10 6.2E-15 96.0 12.4 141 80-230 66-222 (311)
141 3n71_A Histone lysine methyltr 99.2 4.6E-10 1.6E-14 101.1 15.7 143 78-230 304-462 (490)
142 2kc7_A BFR218_protein; tetratr 99.2 1.7E-10 5.9E-15 80.3 10.1 59 136-202 37-95 (99)
143 1pc2_A Mitochondria fission pr 99.2 2.2E-10 7.5E-15 86.3 10.9 102 97-215 12-118 (152)
144 2ond_A Cleavage stimulation fa 99.2 5E-10 1.7E-14 94.6 14.3 133 83-232 99-232 (308)
145 3ro2_A PINS homolog, G-protein 99.2 2.7E-10 9.2E-15 95.4 12.5 123 82-217 4-138 (338)
146 2ifu_A Gamma-SNAP; membrane fu 99.2 1.7E-10 5.9E-15 97.6 11.1 109 81-202 114-228 (307)
147 2f4e_A ATFKBP42; FKBP-like, al 99.2 5.6E-11 1.9E-15 92.8 7.3 82 2-83 98-179 (180)
148 3u3w_A Transcriptional activat 99.2 1.7E-10 5.7E-15 96.8 10.8 107 82-198 154-267 (293)
149 2c2l_A CHIP, carboxy terminus 99.2 3.7E-11 1.3E-15 100.6 6.4 131 82-231 37-198 (281)
150 2ond_A Cleavage stimulation fa 99.1 1.9E-10 6.5E-15 97.2 10.7 137 81-234 48-200 (308)
151 1dce_A Protein (RAB geranylger 99.1 1.1E-09 3.6E-14 100.7 16.3 147 80-245 60-232 (567)
152 1a17_A Serine/threonine protei 99.1 3.4E-10 1.2E-14 85.7 10.9 102 134-236 13-114 (166)
153 3sf4_A G-protein-signaling mod 99.1 2.7E-10 9.4E-15 98.5 11.6 122 83-217 9-142 (406)
154 3sf4_A G-protein-signaling mod 99.1 4.5E-10 1.5E-14 97.1 12.6 140 81-232 185-336 (406)
155 4g1t_A Interferon-induced prot 99.1 3.4E-10 1.2E-14 100.6 12.0 36 83-118 247-282 (472)
156 2qfc_A PLCR protein; TPR, HTH, 99.1 4E-09 1.4E-13 88.3 17.9 140 80-231 72-224 (293)
157 2dba_A Smooth muscle cell asso 99.1 4.9E-10 1.7E-14 83.1 11.0 99 136-235 30-131 (148)
158 3gw4_A Uncharacterized protein 99.1 4E-10 1.4E-14 88.4 10.9 138 82-231 25-175 (203)
159 1ouv_A Conserved hypothetical 99.1 1.8E-09 6E-14 89.2 15.2 128 83-214 6-158 (273)
160 2vyi_A SGTA protein; chaperone 99.1 5.8E-10 2E-14 80.5 10.8 100 134-234 12-111 (131)
161 3ro2_A PINS homolog, G-protein 99.1 4.3E-10 1.5E-14 94.2 11.3 141 81-233 181-333 (338)
162 2if4_A ATFKBP42; FKBP-like, al 99.1 9.1E-11 3.1E-15 100.9 6.8 103 85-204 232-335 (338)
163 1na0_A Designed protein CTPR3; 99.1 8.4E-10 2.9E-14 79.0 10.9 100 135-235 10-109 (125)
164 3ro3_A PINS homolog, G-protein 99.1 7.9E-10 2.7E-14 82.7 10.9 107 83-200 49-161 (164)
165 1wao_1 Serine/threonine protei 99.1 1E-10 3.5E-15 105.3 5.7 103 82-201 39-154 (477)
166 3k9i_A BH0479 protein; putativ 99.1 1E-10 3.6E-15 84.4 4.7 90 146-236 2-94 (117)
167 4f3v_A ESX-1 secretion system 99.1 1.8E-09 6.3E-14 89.9 12.4 109 85-209 137-248 (282)
168 1elr_A TPR2A-domain of HOP; HO 99.0 5.2E-10 1.8E-14 80.9 7.7 98 136-234 6-110 (131)
169 1zu2_A Mitochondrial import re 99.0 5.2E-10 1.8E-14 85.0 7.6 93 145-237 13-125 (158)
170 4a1s_A PINS, partner of inscut 99.0 1E-09 3.5E-14 95.5 10.5 140 80-231 163-331 (411)
171 1dce_A Protein (RAB geranylger 99.0 5.8E-09 2E-13 95.8 15.9 147 78-243 23-182 (567)
172 1ouv_A Conserved hypothetical 99.0 9.4E-09 3.2E-13 84.7 15.5 94 134-232 110-215 (273)
173 3rjv_A Putative SEL1 repeat pr 99.0 1.7E-09 5.9E-14 86.5 10.3 110 82-213 17-136 (212)
174 3rjv_A Putative SEL1 repeat pr 99.0 3.5E-09 1.2E-13 84.6 12.0 111 83-214 50-174 (212)
175 1ihg_A Cyclophilin 40; ppiase 99.0 1E-09 3.6E-14 95.5 9.1 102 134-236 223-340 (370)
176 3qww_A SET and MYND domain-con 99.0 9.3E-09 3.2E-13 91.2 15.0 119 82-209 297-428 (433)
177 3dss_A Geranylgeranyl transfer 99.0 3.3E-08 1.1E-12 84.4 17.7 116 83-215 64-192 (331)
178 3dra_A Protein farnesyltransfe 99.0 1.1E-08 3.9E-13 86.6 14.0 117 81-214 65-192 (306)
179 3dra_A Protein farnesyltransfe 98.9 5.5E-09 1.9E-13 88.5 10.8 132 84-232 104-250 (306)
180 3qwp_A SET and MYND domain-con 98.9 3.1E-08 1.1E-12 87.8 15.9 122 83-213 287-421 (429)
181 3o5e_A Peptidyl-prolyl CIS-tra 98.9 1.7E-09 5.7E-14 81.4 6.6 59 2-63 84-142 (144)
182 3dss_A Geranylgeranyl transfer 98.9 2.2E-08 7.4E-13 85.5 14.2 140 80-236 105-271 (331)
183 4f3v_A ESX-1 secretion system 98.9 6.9E-09 2.4E-13 86.5 10.8 133 84-235 103-240 (282)
184 1hz4_A MALT regulatory protein 98.9 3.1E-08 1.1E-12 85.3 14.7 129 82-221 52-193 (373)
185 2ooe_A Cleavage stimulation fa 98.9 2.3E-08 7.8E-13 90.7 14.4 135 83-234 321-456 (530)
186 2v5f_A Prolyl 4-hydroxylase su 98.9 1.7E-08 5.7E-13 71.4 10.4 79 136-214 7-92 (104)
187 3bee_A Putative YFRE protein; 98.9 1.2E-08 4.1E-13 70.8 9.2 67 136-202 8-77 (93)
188 2vn1_A 70 kDa peptidylprolyl i 98.9 3.7E-09 1.3E-13 78.0 6.9 60 2-64 68-127 (129)
189 3o5q_A Peptidyl-prolyl CIS-tra 98.9 3.3E-09 1.1E-13 78.2 6.6 59 2-63 68-126 (128)
190 3b7x_A FK506-binding protein 6 98.9 2.5E-09 8.6E-14 79.5 5.9 59 2-63 75-133 (134)
191 3kz7_A FK506-binding protein 3 98.9 2.9E-09 1E-13 77.4 6.0 59 2-62 60-118 (119)
192 3gw4_A Uncharacterized protein 98.9 2E-08 6.8E-13 78.5 11.2 110 80-199 63-178 (203)
193 2pbc_A FK506-binding protein 2 98.9 3E-09 1E-13 75.2 5.8 61 2-65 39-99 (102)
194 2awg_A 38 kDa FK-506 binding p 98.9 4.7E-09 1.6E-13 76.2 6.8 59 2-63 59-117 (118)
195 2ppn_A FK506-binding protein 1 98.9 5E-09 1.7E-13 74.7 6.6 58 2-62 49-106 (107)
196 2jwx_A FKBP38NTD, FK506-bindin 98.9 5.2E-09 1.8E-13 79.6 7.1 62 2-66 89-151 (157)
197 4dip_A Peptidyl-prolyl CIS-tra 98.8 4.6E-09 1.6E-13 77.1 6.5 60 2-65 65-124 (125)
198 3q7a_A Farnesyltransferase alp 98.8 6.1E-08 2.1E-12 83.2 14.4 126 90-232 61-196 (349)
199 1yat_A FK506 binding protein; 98.8 5.9E-09 2E-13 75.1 6.7 58 2-62 55-112 (113)
200 3ma5_A Tetratricopeptide repea 98.8 1.2E-08 4.3E-13 71.3 7.9 70 82-168 6-75 (100)
201 2lgo_A FKBP; infectious diseas 98.8 6.7E-09 2.3E-13 76.7 6.8 58 2-62 73-130 (130)
202 1r9h_A FKB-6, FK506 binding pr 98.8 7.8E-09 2.7E-13 76.9 6.6 61 2-65 63-123 (135)
203 2y78_A Peptidyl-prolyl CIS-tra 98.8 7.1E-09 2.4E-13 76.8 6.3 58 2-62 76-133 (133)
204 1nzn_A CGI-135 protein, fissio 98.8 1.2E-07 4E-12 68.9 12.6 103 96-215 14-121 (126)
205 3q7a_A Farnesyltransferase alp 98.8 6E-08 2.1E-12 83.3 12.9 144 81-243 86-246 (349)
206 2v5f_A Prolyl 4-hydroxylase su 98.8 4.3E-08 1.5E-12 69.3 9.7 83 83-175 5-87 (104)
207 2kat_A Uncharacterized protein 98.8 4.8E-08 1.6E-12 69.7 9.7 82 152-234 3-84 (115)
208 2ooe_A Cleavage stimulation fa 98.7 2.2E-07 7.7E-12 84.1 15.5 118 100-235 255-388 (530)
209 1jvw_A Macrophage infectivity 98.7 5.7E-08 1.9E-12 74.6 9.6 67 8-81 89-155 (167)
210 2lkn_A AH receptor-interacting 98.7 8.6E-09 2.9E-13 78.7 4.6 66 2-68 62-162 (165)
211 2d9f_A FK506-binding protein 8 98.7 1.1E-08 3.9E-13 76.0 5.1 63 2-67 63-126 (135)
212 1hz4_A MALT regulatory protein 98.7 1.9E-07 6.6E-12 80.3 12.8 146 77-235 8-167 (373)
213 1klx_A Cysteine rich protein B 98.7 1.9E-07 6.5E-12 69.4 11.0 97 89-208 31-135 (138)
214 2xm6_A Protein corresponding t 98.7 3.2E-07 1.1E-11 82.3 13.5 129 83-213 291-451 (490)
215 3jxv_A 70 kDa peptidyl-prolyl 98.6 4.6E-08 1.6E-12 84.6 6.9 62 2-64 172-236 (356)
216 3oe2_A Peptidyl-prolyl CIS-tra 98.6 9.2E-08 3.1E-12 76.4 6.6 54 8-63 165-218 (219)
217 3e4b_A ALGK; tetratricopeptide 98.6 1.2E-06 3.9E-11 78.2 14.3 107 85-213 178-294 (452)
218 4b4t_Q 26S proteasome regulato 98.6 4E-07 1.4E-11 79.7 10.9 136 85-220 6-193 (434)
219 3n71_A Histone lysine methyltr 98.5 2.8E-07 9.6E-12 83.0 9.5 109 80-202 348-469 (490)
220 1q1c_A FK506-binding protein 4 98.5 1.4E-07 4.6E-12 78.8 6.6 60 2-64 100-159 (280)
221 3u64_A Protein TP_0956; tetrat 98.5 3.8E-07 1.3E-11 75.6 8.7 89 98-201 178-273 (301)
222 3uf8_A Ubiquitin-like protein 98.5 2.5E-07 8.6E-12 73.8 6.7 53 8-62 157-209 (209)
223 1fd9_A Protein (macrophage inf 98.5 2.9E-07 9.8E-12 73.5 6.9 55 8-64 157-211 (213)
224 1klx_A Cysteine rich protein B 98.5 2E-06 7E-11 63.7 11.1 94 96-214 8-105 (138)
225 2xm6_A Protein corresponding t 98.5 3.3E-06 1.1E-10 75.7 14.4 28 85-112 77-108 (490)
226 1u79_A FKBP-type peptidyl-prol 98.4 1.3E-07 4.5E-12 69.6 4.1 60 2-62 60-128 (129)
227 1q1c_A FK506-binding protein 4 98.4 2.4E-07 8.3E-12 77.3 5.8 64 2-67 211-277 (280)
228 3jxv_A 70 kDa peptidyl-prolyl 98.4 1.9E-07 6.6E-12 80.7 5.3 62 2-64 294-355 (356)
229 4b4t_Q 26S proteasome regulato 98.4 3.1E-06 1.1E-10 74.0 12.8 121 79-199 51-206 (434)
230 3ly7_A Transcriptional activat 98.4 6.1E-06 2.1E-10 71.0 14.2 119 83-202 196-344 (372)
231 1xi4_A Clathrin heavy chain; a 98.4 5.5E-06 1.9E-10 81.8 15.0 141 84-250 1196-1366(1630)
232 3e4b_A ALGK; tetratricopeptide 98.4 3.6E-06 1.2E-10 74.9 12.4 101 87-213 217-329 (452)
233 3mv2_B Coatomer subunit epsilo 98.4 2.7E-06 9.1E-11 71.8 10.7 145 86-236 103-286 (310)
234 1b89_A Protein (clathrin heavy 98.4 2.7E-06 9.2E-11 75.0 10.9 103 85-214 124-253 (449)
235 3o48_A Mitochondria fission 1 98.3 5.5E-06 1.9E-10 60.3 10.5 81 136-216 42-126 (134)
236 1q6h_A FKBP-type peptidyl-prol 98.3 7.5E-07 2.6E-11 71.6 6.4 52 8-62 172-223 (224)
237 3u64_A Protein TP_0956; tetrat 98.3 1.4E-05 4.7E-10 66.3 13.3 110 149-258 178-299 (301)
238 1y8m_A FIS1; mitochondria, unk 98.3 1.2E-05 4E-10 59.3 11.0 79 136-214 41-123 (144)
239 3mv2_B Coatomer subunit epsilo 98.2 1.3E-05 4.6E-10 67.5 12.3 117 102-235 85-210 (310)
240 3bee_A Putative YFRE protein; 98.2 7.6E-06 2.6E-10 56.4 9.0 70 83-169 6-78 (93)
241 1pc2_A Mitochondria fission pr 98.2 5.5E-06 1.9E-10 62.2 8.6 79 83-177 32-114 (152)
242 1xi4_A Clathrin heavy chain; a 98.1 9E-05 3.1E-09 73.4 15.5 107 83-197 1134-1250(1630)
243 3ffl_A Anaphase-promoting comp 98.0 8.6E-05 2.9E-09 56.2 11.8 119 85-212 22-165 (167)
244 3qwp_A SET and MYND domain-con 97.8 7.2E-05 2.5E-09 66.2 8.9 88 80-181 326-426 (429)
245 3qww_A SET and MYND domain-con 97.7 0.00012 4.2E-09 64.7 8.6 70 80-163 337-411 (433)
246 1b89_A Protein (clathrin heavy 97.7 2E-05 6.8E-10 69.5 3.3 105 82-194 60-174 (449)
247 2ff4_A Probable regulatory pro 97.7 0.0014 4.6E-08 57.2 14.9 117 80-196 112-233 (388)
248 1hxv_A Trigger factor; FKBP fo 97.6 5.1E-05 1.7E-09 54.2 4.1 52 2-62 60-112 (113)
249 1nzn_A CGI-135 protein, fissio 97.4 0.00079 2.7E-08 48.7 8.2 76 85-176 37-116 (126)
250 3o48_A Mitochondria fission 1 97.3 0.0027 9.3E-08 46.1 10.2 74 88-177 45-121 (134)
251 3pr9_A FKBP-type peptidyl-prol 97.3 0.00017 6E-09 54.5 3.7 39 2-41 47-85 (157)
252 1y8m_A FIS1; mitochondria, unk 97.2 0.0038 1.3E-07 45.9 9.8 74 87-176 43-119 (144)
253 1ix5_A FKBP; ppiase, isomerase 97.2 0.0002 7E-09 53.8 3.1 39 2-41 48-86 (151)
254 3cgm_A SLYD, peptidyl-prolyl C 97.1 0.00042 1.4E-08 52.4 4.3 39 2-41 30-68 (158)
255 4dt4_A FKBP-type 16 kDa peptid 97.1 0.00051 1.8E-08 52.5 4.3 39 2-41 58-96 (169)
256 3ly7_A Transcriptional activat 97.1 0.0025 8.6E-08 54.8 9.0 66 86-169 280-345 (372)
257 3ffl_A Anaphase-promoting comp 97.0 0.0036 1.2E-07 47.3 8.7 95 82-178 62-165 (167)
258 2kr7_A FKBP-type peptidyl-prol 97.0 0.00053 1.8E-08 51.5 4.0 39 2-41 40-78 (151)
259 3prb_A FKBP-type peptidyl-prol 97.0 0.00056 1.9E-08 54.9 4.0 39 2-41 47-85 (231)
260 4e6h_A MRNA 3'-END-processing 96.9 0.0057 2E-07 57.1 11.1 135 86-237 437-575 (679)
261 4e6h_A MRNA 3'-END-processing 96.9 0.022 7.4E-07 53.2 14.6 147 88-235 383-536 (679)
262 2k8i_A SLYD, peptidyl-prolyl C 96.9 0.00092 3.1E-08 51.2 4.3 39 2-41 35-73 (171)
263 2kfw_A FKBP-type peptidyl-prol 96.8 0.00082 2.8E-08 52.6 3.4 39 2-41 35-73 (196)
264 4gns_B Protein CSD3, chitin bi 96.3 0.019 6.5E-07 54.0 10.0 59 136-194 339-397 (754)
265 4h7y_A Dual specificity protei 96.3 0.097 3.3E-06 38.9 11.6 96 100-205 36-131 (161)
266 1w26_A Trigger factor, TF; cha 96.0 0.0083 2.8E-07 52.9 5.6 56 2-65 188-243 (432)
267 3txn_A 26S proteasome regulato 96.0 0.064 2.2E-06 46.5 10.9 99 88-197 104-210 (394)
268 3kae_A CDC27, possible protein 95.9 0.14 4.8E-06 38.9 11.0 96 88-205 38-151 (242)
269 1ya0_A SMG-7 transcript varian 95.9 0.053 1.8E-06 48.6 10.3 79 135-213 153-231 (497)
270 1zbp_A Hypothetical protein VP 95.7 0.12 4.1E-06 42.2 11.0 62 91-169 5-66 (273)
271 2uy1_A Cleavage stimulation fa 95.5 0.71 2.4E-05 41.2 16.4 141 86-229 216-380 (493)
272 4b4t_R RPN7, 26S proteasome re 95.4 0.11 3.7E-06 45.7 10.5 100 86-199 134-239 (429)
273 1zbp_A Hypothetical protein VP 95.4 0.14 4.8E-06 41.8 10.0 68 142-209 5-72 (273)
274 4gns_B Protein CSD3, chitin bi 94.8 0.12 4E-06 48.7 9.2 62 83-161 337-398 (754)
275 4b4t_P 26S proteasome regulato 94.4 0.82 2.8E-05 40.2 13.5 105 82-197 136-247 (445)
276 2uy1_A Cleavage stimulation fa 93.6 1.3 4.5E-05 39.4 13.3 109 86-216 289-398 (493)
277 1ya0_A SMG-7 transcript varian 93.2 0.59 2E-05 41.8 10.2 80 84-180 153-232 (497)
278 4g26_A Pentatricopeptide repea 93.2 1.7 5.8E-05 38.8 13.3 97 85-200 107-209 (501)
279 1t11_A Trigger factor, TF; hel 93.1 0.036 1.2E-06 48.1 2.1 56 2-65 191-246 (392)
280 4g26_A Pentatricopeptide repea 92.8 2.1 7.1E-05 38.2 13.3 120 97-237 84-209 (501)
281 2ff4_A Probable regulatory pro 91.7 1.7 5.7E-05 37.5 11.0 79 140-218 121-221 (388)
282 2v6y_A AAA family ATPase, P60 90.9 0.73 2.5E-05 30.4 6.1 35 79-113 7-41 (83)
283 3mv2_A Coatomer subunit alpha; 90.6 6.7 0.00023 32.7 13.9 118 85-205 116-244 (325)
284 3mkq_A Coatomer beta'-subunit; 88.6 5.3 0.00018 37.1 12.4 47 143-194 661-707 (814)
285 3kae_A CDC27, possible protein 88.3 6.9 0.00024 29.7 11.5 89 138-231 37-142 (242)
286 2cpt_A SKD1 protein, vacuolar 88.0 2.5 8.6E-05 29.7 7.4 44 71-114 5-49 (117)
287 3mkr_B Coatomer subunit alpha; 87.8 11 0.00038 31.4 14.0 114 86-202 105-232 (320)
288 3mkq_B Coatomer subunit alpha; 87.0 1.7 5.7E-05 33.1 6.4 47 144-195 15-61 (177)
289 1qsa_A Protein (soluble lytic 86.9 3.5 0.00012 37.9 9.6 58 139-196 290-347 (618)
290 4b4t_S RPN3, 26S proteasome re 86.8 1.2 4.1E-05 39.8 6.3 66 136-201 233-303 (523)
291 2w2u_A Hypothetical P60 katani 86.5 1.8 6.2E-05 28.4 5.6 38 77-114 13-50 (83)
292 3mkq_B Coatomer subunit alpha; 86.0 6.3 0.00022 29.9 9.2 29 83-111 34-62 (177)
293 1wy6_A Hypothetical protein ST 84.2 7.9 0.00027 28.3 8.3 61 137-197 93-154 (172)
294 3mkq_A Coatomer beta'-subunit; 84.0 5.8 0.0002 36.9 10.0 25 136-160 683-707 (814)
295 3ax2_A Mitochondrial import re 83.6 3.6 0.00012 26.3 5.7 40 78-117 12-51 (73)
296 2v6x_A Vacuolar protein sortin 81.5 1.7 5.8E-05 28.6 3.8 35 79-113 9-43 (85)
297 2w2u_A Hypothetical P60 katani 81.0 5 0.00017 26.3 5.9 15 187-201 45-59 (83)
298 1om2_A Protein (mitochondrial 80.5 5.5 0.00019 26.8 6.0 42 75-116 12-53 (95)
299 1wfd_A Hypothetical protein 15 79.4 4.1 0.00014 27.3 5.2 36 79-114 11-46 (93)
300 3spa_A Mtrpol, DNA-directed RN 79.3 24 0.00083 34.5 12.2 94 85-197 129-230 (1134)
301 4fhn_B Nucleoporin NUP120; pro 79.0 7.6 0.00026 38.4 9.1 108 87-194 846-964 (1139)
302 4h7y_A Dual specificity protei 78.7 8.1 0.00028 28.6 6.9 71 94-182 71-141 (161)
303 4a5x_A MITD1, MIT domain-conta 77.8 4 0.00014 26.9 4.7 32 82-113 15-46 (86)
304 4b4t_R RPN7, 26S proteasome re 77.3 4.2 0.00014 35.4 6.1 97 135-232 132-237 (429)
305 3txn_A 26S proteasome regulato 76.3 37 0.0013 29.2 15.4 131 81-211 17-185 (394)
306 4gq2_M Nucleoporin NUP120; bet 74.7 32 0.0011 33.2 12.0 97 89-206 816-936 (950)
307 2crb_A Nuclear receptor bindin 74.5 5.8 0.0002 26.5 4.6 26 170-195 17-42 (97)
308 3ax2_A Mitochondrial import re 74.1 11 0.00039 23.9 5.9 33 173-205 22-54 (73)
309 3t5v_B Nuclear mRNA export pro 73.4 11 0.00038 33.1 7.7 104 97-201 140-254 (455)
310 3qtm_A Uncharacterized protein 71.0 40 0.0014 27.3 11.1 107 75-181 14-132 (346)
311 2vkj_A TM1634; membrane protei 70.7 20 0.00069 23.7 7.4 35 81-115 51-85 (106)
312 4a5x_A MITD1, MIT domain-conta 69.9 20 0.00069 23.4 8.4 35 163-197 9-45 (86)
313 2cpt_A SKD1 protein, vacuolar 69.4 12 0.00042 26.1 5.8 24 186-209 43-66 (117)
314 2crb_A Nuclear receptor bindin 68.3 12 0.00041 25.0 5.1 36 80-115 12-47 (97)
315 3spa_A Mtrpol, DNA-directed RN 67.7 44 0.0015 32.8 10.9 94 136-231 129-229 (1134)
316 2v6y_A AAA family ATPase, P60 65.5 7.5 0.00026 25.3 3.8 35 187-225 37-71 (83)
317 4fhn_B Nucleoporin NUP120; pro 65.4 31 0.001 34.1 9.8 67 137-203 845-935 (1139)
318 2dl1_A Spartin; SPG20, MIT, st 65.2 32 0.0011 24.0 7.8 75 79-153 18-97 (116)
319 3t5x_A PCI domain-containing p 65.0 12 0.00041 28.9 5.6 52 134-185 14-70 (203)
320 2ijq_A Hypothetical protein; s 63.9 42 0.0014 24.9 8.6 71 83-162 32-103 (161)
321 4b4t_S RPN3, 26S proteasome re 62.1 17 0.00059 32.5 6.6 69 87-167 235-303 (523)
322 2cfu_A SDSA1; SDS-hydrolase, l 61.3 27 0.00093 32.2 8.1 50 168-217 449-498 (658)
323 3ub0_A Non-structural protein 61.2 38 0.0013 25.6 7.2 39 216-258 65-103 (199)
324 2rpa_A Katanin P60 ATPase-cont 58.8 17 0.00057 23.5 4.4 40 72-115 5-44 (78)
325 4gq2_M Nucleoporin NUP120; bet 58.5 17 0.00058 35.2 6.4 53 140-196 816-868 (950)
326 2cfu_A SDSA1; SDS-hydrolase, l 58.0 11 0.00038 34.8 4.9 48 136-183 451-498 (658)
327 4b4t_P 26S proteasome regulato 57.2 96 0.0033 26.9 12.3 72 81-163 175-247 (445)
328 1om2_A Protein (mitochondrial 53.6 20 0.00069 24.0 4.3 27 174-200 26-52 (95)
329 2dl1_A Spartin; SPG20, MIT, st 50.9 21 0.00073 24.8 4.2 44 149-200 18-61 (116)
330 2cwy_A Hypothetical protein TT 50.3 43 0.0015 22.2 5.6 63 87-162 5-67 (94)
331 3lpz_A GET4 (YOR164C homolog); 48.9 1.2E+02 0.004 25.4 13.0 26 166-191 134-159 (336)
332 3t5x_A PCI domain-containing p 47.3 32 0.0011 26.4 5.3 34 168-201 14-47 (203)
333 1qsa_A Protein (soluble lytic 46.7 1.6E+02 0.0056 26.8 10.6 117 89-219 220-336 (618)
334 2wpv_A GET4, UPF0363 protein Y 46.6 1.2E+02 0.0042 25.0 12.5 27 166-192 132-158 (312)
335 2yin_A DOCK2, dedicator of cyt 42.7 49 0.0017 28.8 6.3 100 83-182 35-140 (436)
336 2vkj_A TM1634; membrane protei 42.1 72 0.0025 21.0 7.1 31 168-198 53-83 (106)
337 3bu8_A Telomeric repeat-bindin 40.2 33 0.0011 26.8 4.1 62 150-211 88-157 (235)
338 1wfd_A Hypothetical protein 15 39.4 80 0.0027 20.8 8.5 14 187-200 41-54 (93)
339 3lew_A SUSD-like carbohydrate 39.3 52 0.0018 29.0 6.0 27 136-162 205-231 (495)
340 3myv_A SUSD superfamily protei 37.7 59 0.002 28.2 6.1 27 136-162 192-218 (454)
341 3ph0_C ASCG; type III secretio 37.4 66 0.0023 19.2 6.1 50 138-188 10-60 (61)
342 2xze_A STAM-binding protein; h 36.3 1.1E+02 0.0038 22.1 6.4 43 71-113 28-70 (146)
343 3kez_A Putative sugar binding 35.3 69 0.0024 27.9 6.1 27 136-162 198-224 (461)
344 3myv_A SUSD superfamily protei 34.8 78 0.0027 27.5 6.4 46 151-196 165-218 (454)
345 3mcx_A SUSD superfamily protei 34.8 1.1E+02 0.0036 26.7 7.3 49 150-198 176-232 (477)
346 2yhe_A SEC-alkyl sulfatase; hy 40.7 8.4 0.00029 35.7 0.0 52 136-187 463-514 (668)
347 2pmr_A Uncharacterized protein 34.0 98 0.0034 20.2 5.2 38 75-112 31-68 (87)
348 3eab_A Spastin; spastin, MIT, 33.9 1E+02 0.0035 20.3 5.4 64 82-145 15-83 (89)
349 2oo2_A Hypothetical protein AF 33.9 99 0.0034 20.2 5.2 36 77-112 29-64 (86)
350 3mcx_A SUSD superfamily protei 33.4 73 0.0025 27.8 6.0 55 99-162 176-230 (477)
351 2g0u_A Type III secretion syst 32.6 1.1E+02 0.0037 20.3 5.8 30 183-212 31-60 (92)
352 3bqo_A Telomeric repeat-bindin 32.1 28 0.00097 26.8 2.6 62 150-211 94-160 (211)
353 2v6x_A Vacuolar protein sortin 31.3 1E+02 0.0035 19.7 7.9 17 180-196 25-41 (85)
354 3lew_A SUSD-like carbohydrate 31.3 93 0.0032 27.4 6.3 30 168-197 203-232 (495)
355 3kez_A Putative sugar binding 30.6 88 0.003 27.2 6.0 48 150-197 170-225 (461)
356 4gq4_A Menin; tumor suppressor 29.5 2.4E+02 0.0083 24.5 8.1 48 166-213 301-354 (489)
357 2ymb_A MITD1, MIT domain-conta 29.2 12 0.00039 30.2 0.0 38 78-115 18-55 (257)
358 2lj4_A Peptidyl-prolyl CIS-tra 29.1 24 0.00082 24.4 1.7 20 8-27 81-100 (115)
359 4abx_A DNA repair protein RECN 27.1 1.3E+02 0.0044 22.2 5.6 69 150-224 72-140 (175)
360 4b4t_O 26S proteasome regulato 27.1 95 0.0032 26.4 5.4 61 136-196 129-197 (393)
361 1wy6_A Hypothetical protein ST 26.9 1.9E+02 0.0063 21.2 6.1 29 135-163 126-154 (172)
362 3jq1_A SUSD superfamily protei 25.7 1.3E+02 0.0043 26.4 6.1 27 136-162 182-208 (481)
363 3snx_A SUSD homolog, putative 25.2 1.5E+02 0.0052 25.7 6.5 31 167-197 190-220 (460)
364 3s6n_M SurviVal motor neuron p 25.0 54 0.0018 17.4 2.1 16 183-198 17-32 (37)
365 3snx_A SUSD homolog, putative 24.9 1.3E+02 0.0046 26.0 6.1 28 135-162 192-219 (460)
366 3qnk_A Putative lipoprotein; a 24.5 1.3E+02 0.0045 26.5 6.1 50 99-162 153-210 (517)
367 3re2_A Predicted protein; meni 24.4 2.4E+02 0.0081 24.1 7.0 59 153-211 276-345 (472)
368 2rpa_A Katanin P60 ATPase-cont 24.1 1.5E+02 0.005 18.9 7.7 25 172-196 16-40 (78)
369 2yhe_A SEC-alkyl sulfatase; hy 29.7 17 0.00056 33.8 0.0 51 168-218 461-511 (668)
370 2p58_C Putative type III secre 22.9 1.9E+02 0.0063 19.8 5.2 49 138-191 44-92 (116)
371 4aez_C MAD3, mitotic spindle c 22.9 2.7E+02 0.0093 21.7 10.2 49 152-200 132-182 (223)
372 2e2a_A Protein (enzyme IIA); h 22.4 1.3E+02 0.0043 20.5 4.3 29 166-194 18-46 (105)
373 2uwj_G Type III export protein 22.3 1.8E+02 0.006 19.8 4.8 50 137-191 42-91 (115)
374 1wcr_A PTS system, N, N'-diace 21.7 1.3E+02 0.0046 20.3 4.3 29 166-194 16-44 (103)
375 3u84_A Menin; MLL, JUND, ledgf 20.7 3E+02 0.01 24.0 7.0 59 153-211 298-367 (550)
376 3hdx_A SUSD homolog, SUSD supe 20.5 1.7E+02 0.006 25.4 6.0 49 99-161 156-224 (478)
377 2xze_A STAM-binding protein; h 20.5 2.2E+02 0.0075 20.4 5.5 29 169-197 41-69 (146)
No 1
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=100.00 E-value=1.9e-34 Score=249.79 Aligned_cols=238 Identities=80% Similarity=1.252 Sum_probs=179.6
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeeccccccCCCCCCCCHHHHHH
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTVEERIG 81 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~ 81 (266)
+||.+.++|+||+.+|..|+.||++.|+|+|.++||..|...++.||+++.+.|.+.+..+....++...+.++.++++.
T Consensus 98 ~lg~~~~~i~g~e~~l~~m~~Ge~~~~~i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~~~~~~e~~~~~~~~~~~~~~ 177 (338)
T 2if4_A 98 VLGKEKKELAGLAIGVASMKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIG 177 (338)
T ss_dssp ETTSCCGGGHHHHHHHHHCCBTCEEEEEECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEEEECCCCCBTTTBCCHHHHHH
T ss_pred EcCCCCcccHHHHHHHhcCCCCCeEEEEECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEEecCCccccccccCCHHHHHH
Confidence 57876469999999999999999999999999999999976567899999999999999998887777789999999999
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
.+..++..|+.++..|+|++|+..|.+++.+.|.+......+...+....+...+++|+|.||.++|+|++|+.+|+++|
T Consensus 178 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al 257 (338)
T 2if4_A 178 AADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVL 257 (338)
T ss_dssp HHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999987655455555566666677799999999999999999999999999
Q ss_pred cCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccc
Q 024531 162 GEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPKQK 239 (266)
Q Consensus 162 ~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 239 (266)
.++|++.++++++|.+|..+|+|++|+.+|+++++++|+++.++..|..+....+...++++.+|+++|+..+...++
T Consensus 258 ~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~~~ 335 (338)
T 2if4_A 258 TEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGGAK 335 (338)
T ss_dssp HHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-------------------------------------------
T ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999998888888888889999999987766543
No 2
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.97 E-value=3.3e-29 Score=216.59 Aligned_cols=225 Identities=29% Similarity=0.475 Sum_probs=201.2
Q ss_pred ccCCCC--ccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeeccccccCCCCCCCCHHHH
Q 024531 2 VLGKEK--KEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTVEER 79 (266)
Q Consensus 2 ~lg~~~--~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~ 79 (266)
++|.+. .+++|++.|+..|+.||++.+.++|.++|+..|... ..+|+++.+.|.+.+.++....+ .+.+.....
T Consensus 68 ~lG~g~~~~~~~~~e~al~~~~~Ge~~~l~i~p~~ayg~~g~~~-~~i~~~~~l~f~~~L~~~~~A~~---~~~~a~~~~ 143 (336)
T 1p5q_A 68 EIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEK-FQIPPNAELKYELHLKSFEKAKE---SWEMNSEEK 143 (336)
T ss_dssp ETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECTTTTTTTTCBGG-GTBCSSCCEEEEEEEEEEECCCC---GGGCCHHHH
T ss_pred EeCCCCccccchHHHHHHhcCCCCCeEEEEECCccccCcCCCCc-cCCCCCCeEEEEEEEeecccccc---hhcCCHHHH
Confidence 467662 369999999999999999999999999999999721 25899999999999999887665 788899999
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHh
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 159 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~ 159 (266)
+..+..+..+|+.++..|+|++|+..|.+++.+.|..... ..+.......+...++.|+|.||.++|++++|+.+|++
T Consensus 144 p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~--~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 221 (336)
T 1p5q_A 144 LEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSF--SNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNK 221 (336)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCC--CSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccC--ChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999986432 12233344555677899999999999999999999999
Q ss_pred HhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 024531 160 VLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGP 232 (266)
Q Consensus 160 al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~ 232 (266)
++.++|+++.+++++|.+|..+|++++|+.+|+++++++|++..++..+..+...+++..++++.+|++||+.
T Consensus 222 al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 222 ALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999864
No 3
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.97 E-value=5.8e-29 Score=223.61 Aligned_cols=231 Identities=27% Similarity=0.468 Sum_probs=196.1
Q ss_pred ccCCC--CccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeeccccccCCCCCCCCHHHH
Q 024531 2 VLGKE--KKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTVEER 79 (266)
Q Consensus 2 ~lg~~--~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~ 79 (266)
++|.+ ..++.|++.|+..|+.||++.+.++|.++|+..|... ..+|+++.+.|.+.+..+.+... .+.+.....
T Consensus 189 ~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~-~~ip~~~~l~y~~~l~~~~~A~~---~~~~~~~~~ 264 (457)
T 1kt0_A 189 TVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPK-FGIEPNAELIYEVTLKSFEKAKE---SWEMDTKEK 264 (457)
T ss_dssp ETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBGG-GTBCTTCCEEEEEEEEEEECCCC---GGGSCHHHH
T ss_pred EeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCcc-cCCCCCCEEEEEhhhhhcccCcc---hhhcCHHHH
Confidence 35644 2589999999999999999999999999999999732 36899999999999998877665 889999999
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHh
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 159 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~ 159 (266)
+..+..++.+|+.+++.|+|.+|+..|.+|+.+.|..... ..+.......+...+++|+|.||.++|+|++|+.+|++
T Consensus 265 ~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~--~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 342 (457)
T 1kt0_A 265 LEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGL--SEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDK 342 (457)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSC--CHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccC--ChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 9999999999999999999999999999999999986432 12233345566677999999999999999999999999
Q ss_pred HhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcc
Q 024531 160 VLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPKQ 238 (266)
Q Consensus 160 al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~~~~ 238 (266)
+|.++|+++++++++|.+|..+|+|++|+.+|+++++++|++..++..+..+...+++..++++.+|++||+.....++
T Consensus 343 al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~f~k~~~~d~ 421 (457)
T 1kt0_A 343 ALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANMFKKFAEQDA 421 (457)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC---------
T ss_pred HHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999986554443
No 4
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.90 E-value=1.4e-23 Score=162.01 Aligned_cols=156 Identities=26% Similarity=0.342 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhh-chhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHH
Q 024531 76 VEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQL-FGKYRDMALAVKNPCHLNMAACLLKLKRYEEAI 154 (266)
Q Consensus 76 ~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~-~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~ 154 (266)
.++++..+..+++.|+.++..|+|++|+..|.+++.+.+....... ..............+++|+|.||+++|+|++|+
T Consensus 4 ~~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~ 83 (162)
T 3rkv_A 4 EDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAE 83 (162)
T ss_dssp ----CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 3456778999999999999999999999999999999543221100 111122334456668999999999999999999
Q ss_pred HHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 024531 155 GQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK-SIARELRLLAEHEKAVYKKQKEIYKGIFG 231 (266)
Q Consensus 155 ~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~-~~~~~l~~l~~~~~~~~~~~~~~~~k~~~ 231 (266)
.+|++++.++|+++++++++|.+|..+|+|++|+.+|++++.++|+++ .+...+..+...+++..++++..|++||+
T Consensus 84 ~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 161 (162)
T 3rkv_A 84 ETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKKADSRVTYSKMFQ 161 (162)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTTSSCC-------
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999 88999999999999999999999999985
No 5
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.89 E-value=2.6e-22 Score=148.97 Aligned_cols=115 Identities=23% Similarity=0.351 Sum_probs=110.1
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHh
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 159 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~ 159 (266)
++.++.++++|+.+|+.|+|++|+..|+++|+++|.+.. ++.++|.||.++|++++|+.+|++
T Consensus 10 P~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------~~~~~~~~~~~~~~~~~A~~~~~~ 72 (126)
T 4gco_A 10 PELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAI-----------------LYSNRAACLTKLMEFQRALDDCDT 72 (126)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-----------------HHHHHhhHHHhhccHHHHHHHHHH
Confidence 567889999999999999999999999999999999766 699999999999999999999999
Q ss_pred HhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 024531 160 VLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLL 211 (266)
Q Consensus 160 al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l 211 (266)
+++++|+++.+++++|.++..+|++++|+.+|+++++++|+|++++..|+.|
T Consensus 73 al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 124 (126)
T 4gco_A 73 CIRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNC 124 (126)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHhhhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999988865
No 6
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.86 E-value=1.2e-20 Score=150.18 Aligned_cols=174 Identities=31% Similarity=0.423 Sum_probs=135.8
Q ss_pred EeeccccccCCCCCCCCHHHHHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhh
Q 024531 59 LIGFDETKEGKARSDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHL 138 (266)
Q Consensus 59 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 138 (266)
+..+.+..+ .|+++..+....+..+...|..++..|+|++|+..|.+++.+.|........ ........+...++.
T Consensus 17 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 92 (198)
T 2fbn_A 17 LYFQGAKKS---IYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQ-ILLDKKKNIEISCNL 92 (198)
T ss_dssp -----CCCS---GGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCH-HHHHHHHHHHHHHHH
T ss_pred hhhccccCc---hhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchh-hHHHHHHHHHHHHHH
Confidence 344444444 8999999999999999999999999999999999999999998876532111 122223444556899
Q ss_pred hHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHH
Q 024531 139 NMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAV 218 (266)
Q Consensus 139 n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~ 218 (266)
++|.++..+|++++|+.+|++++.++|++..+++++|.++..+|++++|+.+|++++.++|++..++..+..+...+++.
T Consensus 93 ~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 172 (198)
T 2fbn_A 93 NLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEA 172 (198)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccCCCCCC
Q 024531 219 YKKQKEIYKGIFGPRPEP 236 (266)
Q Consensus 219 ~~~~~~~~~k~~~~~~~~ 236 (266)
.+..+..|+++|+...-.
T Consensus 173 ~~~~~~~~~~~f~~~~~~ 190 (198)
T 2fbn_A 173 RKKDKLTFGGMFDKGPLY 190 (198)
T ss_dssp HC----------------
T ss_pred HHHHHHHHHHHhcccchh
Confidence 888888999999765443
No 7
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.85 E-value=4.2e-21 Score=146.62 Aligned_cols=142 Identities=18% Similarity=0.170 Sum_probs=119.8
Q ss_pred CCHHHHHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHH
Q 024531 74 MTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEA 153 (266)
Q Consensus 74 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A 153 (266)
|.+-..+..+..+...|+.+++.|+|++|+..|++||+++|+.+..+... .......+|+|+|.|+.++|+|++|
T Consensus 2 ~~~~~~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~-----~~~~~a~a~~n~g~al~~Lgr~~eA 76 (159)
T 2hr2_A 2 MKPLKEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFD-----HAGFDAFCHAGLAEALAGLRSFDEA 76 (159)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCC-----HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhh-----hccchHHHHHHHHHHHHHCCCHHHH
Confidence 44444567899999999999999999999999999999999843211000 0112233899999999999999999
Q ss_pred HHHHHhHhcC-------CCCchHHH----HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHH
Q 024531 154 IGQCSLVLGE-------DENNVKAL----FRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYK 220 (266)
Q Consensus 154 ~~~~~~al~l-------~p~~~~a~----~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~ 220 (266)
+.+|+++|++ +|++.++| |++|.++..+|++++|+.+|+++++++|++..+...+..+++..+...+
T Consensus 77 l~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~~~~~~ 154 (159)
T 2hr2_A 77 LHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAIDRIA 154 (159)
T ss_dssp HHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 99999999 9999999999999999999999999999999999888888766665543
No 8
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.85 E-value=1.7e-21 Score=174.99 Aligned_cols=233 Identities=17% Similarity=0.144 Sum_probs=159.8
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeeccccccCC------------
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGK------------ 69 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~~~~~~~~------------ 69 (266)
+||.+ .+|+||+.+|..|+.||++.|+|+|.++||..|. ++.||++++++|.|++.++...+-..
T Consensus 80 ~~g~~-~~i~g~~~~l~~m~~Ge~~~~~i~~~~~yg~~g~--~~~i~~~~~l~~~v~l~~~~~~~~~~dg~~~k~i~~~g 156 (457)
T 1kt0_A 80 SLGKG-QVIKAWDIGVATMKRGEICHLLCKPEYAYGSAGS--LPKIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKG 156 (457)
T ss_dssp ETTST-TSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEECEETTSSSSEEEEEEECC
T ss_pred EeCCc-chhhHHHHHHhhCCCCCEEEEEEChHHhccccCC--CCCCCCCCcEEEEEeeceeecccccCCcceEEEEEecC
Confidence 58888 7999999999999999999999999999999997 67899999999999999875421100
Q ss_pred CCCCCCHH--------------HHHHH--HHHHHHHhHHHHhhccHHHHHHHHHH----HHhhhccchhhhhch------
Q 024531 70 ARSDMTVE--------------ERIGA--ADRRKMDGNALFKEEKLEEAMQQYEM----AIAYMGDDFMFQLFG------ 123 (266)
Q Consensus 70 ~~~~~~~~--------------~~~~~--~~~~~~~g~~~~~~g~~~~A~~~y~~----al~~~~~~~~~~~~~------ 123 (266)
.-+..... ..+.. .......|....-...++.|+..+.+ +|.+.|.. .+...+
T Consensus 157 ~~~~~p~~g~~V~v~y~g~~~g~~f~~~~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~-ay~~~g~~~~~i 235 (457)
T 1kt0_A 157 EGYSNPNEGATVEIHLEGRCGGRMFDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRY-GFGEAGKPKFGI 235 (457)
T ss_dssp BCSCCCCTTCEEEEEEEEEETTEEEEEEEEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGG-TTCSSCBGGGTB
T ss_pred CCCCCCCCCCEEEEEEEEEeCCeEEecCceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECccc-ccCCCCCcccCC
Confidence 00000000 00000 00000000000111245555555554 44444321 000000
Q ss_pred -----------------h-----HHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCc--------------
Q 024531 124 -----------------K-----YRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENN-------------- 167 (266)
Q Consensus 124 -----------------~-----~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~-------------- 167 (266)
. .......-...++.++|.++++.|+|.+|+..|++|+.++|.+
T Consensus 236 p~~~~l~y~~~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~ 315 (457)
T 1kt0_A 236 EPNAELIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESF 315 (457)
T ss_dssp CTTCCEEEEEEEEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHH
T ss_pred CCCCEEEEEhhhhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHH
Confidence 0 0001112234478999999999999999999999999999998
Q ss_pred -hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccc
Q 024531 168 -VKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPKQK 239 (266)
Q Consensus 168 -~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 239 (266)
..+++++|.||..+|+|++|+.+|++++.++|++..++..++.+...+++..++. ..|.+++...+.....
T Consensus 316 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~-~~~~~al~l~P~~~~a 387 (457)
T 1kt0_A 316 LLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAK-GDFEKVLEVNPQNKAA 387 (457)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHTTC----CH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHH-HHHHHHHHhCCCCHHH
Confidence 6999999999999999999999999999999999999999999988888776654 4588988877665543
No 9
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.81 E-value=4.7e-19 Score=154.91 Aligned_cols=156 Identities=31% Similarity=0.433 Sum_probs=131.4
Q ss_pred CHHHHHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHH
Q 024531 75 TVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAI 154 (266)
Q Consensus 75 ~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~ 154 (266)
+.+.....+..++..|+.++..|+|++|+..|.+++.+.+..... ...+...........++.|+|.||.++|+|++|+
T Consensus 215 ~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~-~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~ 293 (370)
T 1ihg_A 215 DVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAA-AEDADGAKLQPVALSCVLNIGACKLKMSDWQGAV 293 (370)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH-SCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccc-cChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHH
Confidence 578888999999999999999999999999999999976553210 0000011123335568999999999999999999
Q ss_pred HHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 024531 155 GQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFG 231 (266)
Q Consensus 155 ~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~ 231 (266)
.+|+++++++|+++++++++|.+|..+|++++|+.+|+++++++|++..++..+..+...+++..++++..|++||+
T Consensus 294 ~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~~~~kmf~ 370 (370)
T 1ihg_A 294 DSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKAAYAKMFA 370 (370)
T ss_dssp HHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999884
No 10
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.81 E-value=5.2e-19 Score=131.13 Aligned_cols=115 Identities=23% Similarity=0.259 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHH
Q 024531 79 RIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCS 158 (266)
Q Consensus 79 ~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~ 158 (266)
..+.+..++++|+.+++.|+|++|+..|++||+++|.+.. ++.|+|.||..+|+|++|+.+|+
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~-----------------~~~nlg~~~~~~~~~~~A~~~~~ 66 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNIT-----------------FYNNKAAVYFEEKKFAECVQFCE 66 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-----------------HHHhHHHHHHHhhhHHHHHHHHH
Confidence 3567888999999999999999999999999999999765 69999999999999999999999
Q ss_pred hHhcCCCCch-------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 024531 159 LVLGEDENNV-------KALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLL 211 (266)
Q Consensus 159 ~al~l~p~~~-------~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l 211 (266)
++++++|++. ++++++|.++..+|++++|+.+|++++..+|+ ++....|..+
T Consensus 67 ~al~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~~l 125 (127)
T 4gcn_A 67 KAVEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKVKEL 125 (127)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHHHHH
T ss_pred HHHHhCcccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHHHHh
Confidence 9999988763 68999999999999999999999999999986 6665555543
No 11
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.80 E-value=9.6e-19 Score=128.74 Aligned_cols=117 Identities=23% Similarity=0.310 Sum_probs=109.9
Q ss_pred HHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhH
Q 024531 81 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 160 (266)
Q Consensus 81 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~a 160 (266)
..+..+...|..++..|+|++|+..|.+++...|.+.. ++.++|.++..+|++++|+.+|+++
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~-----------------~~~~~a~~~~~~~~~~~A~~~~~~a 64 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDAR-----------------GYSNRAAALAKLMSFPEAIADCNKA 64 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChH-----------------HHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 35778899999999999999999999999999998765 6999999999999999999999999
Q ss_pred hcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC------CCCHHHHHHHHHHHHH
Q 024531 161 LGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFA------PEDKSIARELRLLAEH 214 (266)
Q Consensus 161 l~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~------p~~~~~~~~l~~l~~~ 214 (266)
+.++|+++.+++++|.++..+|++++|+.+|++++.++ |+++.+...+..+...
T Consensus 65 l~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 65 IEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQ 124 (126)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHH
T ss_pred HHhCCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999 9999999888877543
No 12
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.78 E-value=4.3e-18 Score=130.14 Aligned_cols=106 Identities=15% Similarity=0.186 Sum_probs=101.4
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHh
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 159 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~ 159 (266)
+..+..++..|..+++.|+|++|+..|.+++.++|.+.. ++.++|.++..+|++++|+..|++
T Consensus 33 p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~-----------------~~~~lg~~~~~~g~~~~Ai~~~~~ 95 (151)
T 3gyz_A 33 DDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVD-----------------YIMGLAAIYQIKEQFQQAADLYAV 95 (151)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHHccHHHHHHHHHH
Confidence 556788999999999999999999999999999999776 599999999999999999999999
Q ss_pred HhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q 024531 160 VLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK 202 (266)
Q Consensus 160 al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 202 (266)
++.++|+++.+++++|.||..+|++++|+.+|++++++.|+++
T Consensus 96 al~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 96 AFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 9999999999999999999999999999999999999999865
No 13
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.77 E-value=9.9e-18 Score=129.13 Aligned_cols=120 Identities=23% Similarity=0.227 Sum_probs=108.1
Q ss_pred HHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhH
Q 024531 81 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 160 (266)
Q Consensus 81 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~a 160 (266)
..+..+...|..++..|+|++|+..|.+++.+.|.+.. ++.++|.+|..+|++++|+.+|+++
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------~~~~l~~~~~~~g~~~~A~~~~~~a 71 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPI-----------------YLSNRAAAYSASGQHEKAAEDAELA 71 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHH-----------------HHHHHHHHHHHccCHHHHHHHHHHH
Confidence 45788999999999999999999999999999998665 6999999999999999999999999
Q ss_pred hcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH--HHHHHHHHHHHHHH
Q 024531 161 LGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKS--IARELRLLAEHEKA 217 (266)
Q Consensus 161 l~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~--~~~~l~~l~~~~~~ 217 (266)
+.++|+++.+++++|.++..+|++++|+.+|+++++++|++.. ....+..+...+++
T Consensus 72 l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~ 130 (164)
T 3sz7_A 72 TVVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKIEE 130 (164)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999887 45555544444433
No 14
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.76 E-value=7.6e-19 Score=134.00 Aligned_cols=131 Identities=15% Similarity=0.062 Sum_probs=113.1
Q ss_pred HhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCch
Q 024531 89 DGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNV 168 (266)
Q Consensus 89 ~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~ 168 (266)
+|..+..+|++++|+..|++++...|+... .++++|.+|++.|+|++|+.+++++++++|+++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~-----------------~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~ 65 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQKSI-----------------KGFYFAKLYYEAKEYDLAKKYICTYINVQERDP 65 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHHHHT-----------------THHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcccHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 578888999999999999999999887554 588999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 024531 169 KALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEP 236 (266)
Q Consensus 169 ~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~~ 236 (266)
.+|+.+|.+|..+|++++|+.+|+++++++|+++.+...++.+....++..++.+..+++.+...|..
T Consensus 66 ~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~ 133 (150)
T 4ga2_A 66 KAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGS 133 (150)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCC
Confidence 99999999999999999999999999999999999999999988777776666666567777665554
No 15
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.76 E-value=1.3e-17 Score=125.62 Aligned_cols=123 Identities=20% Similarity=0.186 Sum_probs=111.1
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHh
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 159 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~ 159 (266)
+.....+...|..++..|+|++|+..|.+++...|.+.. ++.++|.++..+|++++|+..|++
T Consensus 15 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------~~~~lg~~~~~~g~~~~A~~~~~~ 77 (142)
T 2xcb_A 15 EDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDAR-----------------YFLGLGACRQSLGLYEQALQSYSY 77 (142)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHH-----------------HHHHHHHHHHHHhhHHHHHHHHHH
Confidence 455678889999999999999999999999999998766 589999999999999999999999
Q ss_pred HhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHH
Q 024531 160 VLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVY 219 (266)
Q Consensus 160 al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~ 219 (266)
++.++|+++.+++.+|.++..+|++++|+..|++++.++|+++........+...++...
T Consensus 78 al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~l~ 137 (142)
T 2xcb_A 78 GALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLEAVT 137 (142)
T ss_dssp HHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998877766666655555443
No 16
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.76 E-value=3.2e-18 Score=130.48 Aligned_cols=117 Identities=9% Similarity=0.020 Sum_probs=106.5
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHh
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 159 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~ 159 (266)
++....+...|..++..|+|++|+..|.++++++|++.. ++.++|.+|..+|++++|+.+|++
T Consensus 28 p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~-----------------a~~~lg~~~~~~~~~~~A~~~~~~ 90 (150)
T 4ga2_A 28 RQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPK-----------------AHRFLGLLYELEENTDKAVECYRR 90 (150)
T ss_dssp HHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHcCchHHHHHHHHH
Confidence 345566778999999999999999999999999999766 699999999999999999999999
Q ss_pred HhcCCCCchHHHHHHHHHHHHcCCHHHHHHH-HHHHHhhCCCCHHHHHHHHHHHH
Q 024531 160 VLGEDENNVKALFRRGKARAELGQTDAARED-FLKAGKFAPEDKSIARELRLLAE 213 (266)
Q Consensus 160 al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~-~~~al~l~p~~~~~~~~l~~l~~ 213 (266)
+++++|+++.+++++|.++..+|++++|... ++++++++|+|+.+......+..
T Consensus 91 al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~ 145 (150)
T 4ga2_A 91 SVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLD 145 (150)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 9999999999999999999999999887776 59999999999999887776643
No 17
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.75 E-value=1.8e-17 Score=126.17 Aligned_cols=120 Identities=13% Similarity=0.104 Sum_probs=107.8
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHh
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 159 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~ 159 (266)
+.....+...|..++..|+|++|+..|.+++...|.+.. ++.++|.++..+|++++|+..|++
T Consensus 18 p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------~~~~lg~~~~~~g~~~~A~~~~~~ 80 (148)
T 2vgx_A 18 SDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSR-----------------FFLGLGACRQAMGQYDLAIHSYSY 80 (148)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHH-----------------HHHHHHHHHHHHhhHHHHHHHHHH
Confidence 456778889999999999999999999999999999766 589999999999999999999999
Q ss_pred HhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q 024531 160 VLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEK 216 (266)
Q Consensus 160 al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~ 216 (266)
++.++|+++.+++++|.++..+|++++|+.+|+++++++|+++........+...++
T Consensus 81 al~l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~ 137 (148)
T 2vgx_A 81 GAVMDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFXELSTRVSSMLE 137 (148)
T ss_dssp HHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHH
T ss_pred HHhcCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998776555554444333
No 18
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.74 E-value=2.2e-17 Score=155.49 Aligned_cols=139 Identities=17% Similarity=0.180 Sum_probs=126.5
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHh
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 159 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~ 159 (266)
+..++.+..+|+.+...|++++|+..|++||+++|+... +++|+|.+|.++|++++|+.+|++
T Consensus 6 P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~-----------------a~~nLg~~l~~~g~~~eA~~~~~~ 68 (723)
T 4gyw_A 6 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAA-----------------AHSNLASVLQQQGKLQEALMHYKE 68 (723)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHcCCHHHHHHHHHH
Confidence 456889999999999999999999999999999999665 699999999999999999999999
Q ss_pred HhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 024531 160 VLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEP 236 (266)
Q Consensus 160 al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~~ 236 (266)
|++++|++..+++++|.++..+|++++|+++|+++++++|++..++..++.+...+++.+++... |++.+...++.
T Consensus 69 Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~-~~~Al~l~P~~ 144 (723)
T 4gyw_A 69 AIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS-YRTALKLKPDF 144 (723)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH-HHHHHHHCSCC
T ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHH-HHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999998888877666554 78887765543
No 19
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.73 E-value=4.6e-17 Score=120.90 Aligned_cols=121 Identities=30% Similarity=0.345 Sum_probs=110.9
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
.+..+...|..++..|+|++|+..|.+++...|.+.. ++.++|.++..+|++++|+.++++++
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~-----------------~~~~l~~~~~~~~~~~~A~~~~~~al 70 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAV-----------------YYTNRALCYLKMQQPEQALADCRRAL 70 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHH-----------------HHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 3678899999999999999999999999999998655 69999999999999999999999999
Q ss_pred cCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-----CHHHHHHHHHHHHHHHHHH
Q 024531 162 GEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPE-----DKSIARELRLLAEHEKAVY 219 (266)
Q Consensus 162 ~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~-----~~~~~~~l~~l~~~~~~~~ 219 (266)
.++|+++.+++.+|.++..+|++++|+..|++++.++|+ +..+...+..+........
T Consensus 71 ~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~ 133 (137)
T 3q49_B 71 ELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSI 133 (137)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHHH
T ss_pred HhCchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998 7888888887765554443
No 20
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.73 E-value=2e-16 Score=126.91 Aligned_cols=147 Identities=17% Similarity=0.096 Sum_probs=113.2
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
++.+...|..++..|+|++|+..|.+++..+|++...-..... .....+...+.+++|.+|...|++++|+..|+++++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~-~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 82 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNV-DKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQ 82 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHS-CTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhh-cchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 5677899999999999999999999999999986542000000 000001112233499999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHhccc
Q 024531 163 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAV-YKKQKEIYKGIF 230 (266)
Q Consensus 163 l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~-~~~~~~~~~k~~ 230 (266)
++|+++.+++.+|.++..+|++++|+.+|+++++++|+++.++..++.+.-...+. .+.....|+++.
T Consensus 83 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~ 151 (208)
T 3urz_A 83 KAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKKLETDYKKLS 151 (208)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999886544432 223334455543
No 21
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.71 E-value=8e-17 Score=130.07 Aligned_cols=131 Identities=15% Similarity=0.084 Sum_probs=82.1
Q ss_pred HHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHh-----------hCHHHH
Q 024531 85 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKL-----------KRYEEA 153 (266)
Q Consensus 85 ~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~-----------~~~~~A 153 (266)
.+...|..+...|++++|+..|.+++.+.|++.. ++.++|.++... |++++|
T Consensus 41 a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~-----------------a~~~lg~~~~~~~~~~~~~~~~~g~~~~A 103 (217)
T 2pl2_A 41 ALYWLARTQLKLGLVNPALENGKTLVARTPRYLG-----------------GYMVLSEAYVALYRQAEDRERGKGYLEQA 103 (217)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHHHHTCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH-----------------HHHHHHHHHHHhhhhhhhhcccccCHHHH
Confidence 3344444444444444444444444444444332 566777777777 777777
Q ss_pred HHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Q 024531 154 IGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPR 233 (266)
Q Consensus 154 ~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~ 233 (266)
+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++ +++.++..++.+....++..++.. .|++++...
T Consensus 104 ~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~-~~~~al~~~ 181 (217)
T 2pl2_A 104 LSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEALA-QYAKALEQA 181 (217)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHH-HHHHHHHHS
T ss_pred HHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHH-HHHHHHHhC
Confidence 777777777777777777777777777777777777777777777 777777777777666665544433 356666544
Q ss_pred C
Q 024531 234 P 234 (266)
Q Consensus 234 ~ 234 (266)
|
T Consensus 182 P 182 (217)
T 2pl2_A 182 P 182 (217)
T ss_dssp T
T ss_pred C
Confidence 3
No 22
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.69 E-value=1e-15 Score=109.63 Aligned_cols=114 Identities=18% Similarity=0.199 Sum_probs=107.2
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
.+..+...|..++..|++++|+..|.+++...|.+.. ++.++|.++...|++++|+..+++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~-----------------~~~~~a~~~~~~~~~~~A~~~~~~~~ 65 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHV-----------------LYSNRSAAYAKKGDYQKAYEDGCKTV 65 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHH-----------------HHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 4678889999999999999999999999999998655 68999999999999999999999999
Q ss_pred cCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 024531 162 GEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLA 212 (266)
Q Consensus 162 ~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~ 212 (266)
..+|+++.+++.+|.++..+|++++|...|++++.++|+++.+...+..+.
T Consensus 66 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 66 DLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HhCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999988887664
No 23
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.69 E-value=9.9e-16 Score=123.82 Aligned_cols=134 Identities=16% Similarity=0.211 Sum_probs=117.4
Q ss_pred HHHHHHhHHHHhhccHHHHHHHHHHHHhhhc-cchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 84 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMG-DDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 84 ~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~-~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
..+...|..++..|+|++|+..|.+++...| .+.. +++++|.++..+|++++|+.++++++.
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~A~~~~~~al~ 70 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSV-----------------TAYNCGVCADNIKKYKEAADYFDIAIK 70 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcH-----------------HHHHHHHHHHHhhcHHHHHHHHHHHHH
Confidence 6788999999999999999999999999998 5443 588899999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 024531 163 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK-------SIARELRLLAEHEKAVYKKQKEIYKGIFGPRPE 235 (266)
Q Consensus 163 l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~-------~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~ 235 (266)
++|++..+++.+|.++..+|++++|+..|++++.++|+++ .+...++.+....++..++ ...|.+++...+.
T Consensus 71 ~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A-~~~~~~al~~~p~ 149 (228)
T 4i17_A 71 KNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKA-EENYKHATDVTSK 149 (228)
T ss_dssp TTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHH-HHHHHHHTTSSCH
T ss_pred hCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHH-HHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999 5567777776666665544 4457888876443
No 24
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.68 E-value=4.1e-15 Score=113.43 Aligned_cols=118 Identities=24% Similarity=0.342 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHH
Q 024531 77 EERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQ 156 (266)
Q Consensus 77 ~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~ 156 (266)
......+..+...|..++..|+|+.|+..|.+++...|.+.. ++.++|.++...|++++|+..
T Consensus 7 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~-----------------~~~~~a~~~~~~~~~~~A~~~ 69 (166)
T 1a17_A 7 DGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAI-----------------YYGNRSLAYLRTECYGYALGD 69 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHH-----------------HHHHHHHHHHHTTCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChH-----------------HHHHHHHHHHHcCCHHHHHHH
Confidence 455678899999999999999999999999999999998655 699999999999999999999
Q ss_pred HHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 024531 157 CSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLL 211 (266)
Q Consensus 157 ~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l 211 (266)
+.+++.++|.++.+++.+|.++..+|++++|+..|++++.++|++..+...+..+
T Consensus 70 ~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~ 124 (166)
T 1a17_A 70 ATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 124 (166)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999888666665
No 25
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.68 E-value=1.9e-15 Score=110.16 Aligned_cols=123 Identities=28% Similarity=0.329 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHH
Q 024531 77 EERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQ 156 (266)
Q Consensus 77 ~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~ 156 (266)
......+..+...|..++..|+++.|+..|.+++...|.... ++.++|.++...|++++|+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~-----------------~~~~~a~~~~~~~~~~~A~~~ 68 (131)
T 2vyi_A 6 EEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAV-----------------YFCNRAAAYSKLGNYAGAVQD 68 (131)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHH
T ss_pred hcchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHH-----------------HHHHHHHHHHHhhchHHHHHH
Confidence 344567888999999999999999999999999999988654 689999999999999999999
Q ss_pred HHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q 024531 157 CSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEK 216 (266)
Q Consensus 157 ~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~ 216 (266)
+.+++..+|+++.+++.+|.++..+|++++|+..|++++.++|++..+...+..+...++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~ 128 (131)
T 2vyi_A 69 CERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLR 128 (131)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999988887765443
No 26
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.68 E-value=9.4e-16 Score=123.73 Aligned_cols=88 Identities=16% Similarity=0.120 Sum_probs=76.6
Q ss_pred hhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 024531 134 NPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAE 213 (266)
Q Consensus 134 ~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~ 213 (266)
..++.++|.++..+|++++|+..|+++++++ +++.+++.+|.++..+|++++|+..|+++++++|+++.+...+..+..
T Consensus 118 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~la~~~~ 196 (217)
T 2pl2_A 118 APLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASALL 196 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 5578999999999999999999999999999 999999999999999999999999999999999999999999998877
Q ss_pred HHHHHHHHH
Q 024531 214 HEKAVYKKQ 222 (266)
Q Consensus 214 ~~~~~~~~~ 222 (266)
..++..++.
T Consensus 197 ~~g~~~~A~ 205 (217)
T 2pl2_A 197 LKGKAEEAA 205 (217)
T ss_dssp C--------
T ss_pred HccCHHHHH
Confidence 776665443
No 27
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.67 E-value=3.3e-16 Score=114.96 Aligned_cols=102 Identities=12% Similarity=0.002 Sum_probs=91.0
Q ss_pred HHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCC
Q 024531 85 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED 164 (266)
Q Consensus 85 ~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~ 164 (266)
.+...|..++..|++++|+..|.+++...|++.. +++++|.++...|++++|+..++++++++
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~-----------------a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 81 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREE-----------------AWRSLGLTQAENEKDGLAIIALNHARMLD 81 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 3578899999999999999999999999999766 69999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH
Q 024531 165 ENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKS 203 (266)
Q Consensus 165 p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~ 203 (266)
|+++.+++.+|.++..+|++++|+..|+++++++|++..
T Consensus 82 P~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 82 PKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCCC
Confidence 999999999999999999999999999999999998754
No 28
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.67 E-value=1.3e-15 Score=118.87 Aligned_cols=151 Identities=13% Similarity=0.103 Sum_probs=111.5
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhh--------hchhHHHHHH---------HhhhhhhhhHHHHH
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQ--------LFGKYRDMAL---------AVKNPCHLNMAACL 144 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~--------~~~~~~~~~~---------~l~~~~~~n~a~~~ 144 (266)
.+..+..+|..++..|+|++|+..|+++++++|++...- ..+...+... .-...++.++|.++
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSAN 83 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 356788999999999999999999999999999865431 0111111110 01133566777777
Q ss_pred HHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 024531 145 LKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKE 224 (266)
Q Consensus 145 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~ 224 (266)
...++++.|+..+.+++.++|++..+++.+|.++..+|++++|+..|+++++++|+++.+...++.+...+++..++..
T Consensus 84 ~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~- 162 (184)
T 3vtx_A 84 FMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVK- 162 (184)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH-
T ss_pred HHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHH-
Confidence 7788888888888888888888888888888888888888888888888888888888888888888777766655444
Q ss_pred HHhcccCCC
Q 024531 225 IYKGIFGPR 233 (266)
Q Consensus 225 ~~~k~~~~~ 233 (266)
.|++.+...
T Consensus 163 ~~~~al~~~ 171 (184)
T 3vtx_A 163 YFKKALEKE 171 (184)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHhCC
Confidence 467766543
No 29
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.66 E-value=2.7e-15 Score=110.01 Aligned_cols=116 Identities=10% Similarity=0.093 Sum_probs=104.7
Q ss_pred HHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCC
Q 024531 85 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED 164 (266)
Q Consensus 85 ~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~ 164 (266)
.+...|..++..|+|++|+..|.+++...|++.. ...+++++|.++...|++++|+..+++++..+
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~--------------~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~ 69 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGVY--------------TPNALYWLGESYYATRNFQLAEAQFRDLVSRY 69 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTT--------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcc--------------cHHHHHHHHHHHHHhccHHHHHHHHHHHHHHC
Confidence 4678899999999999999999999999998652 12368999999999999999999999999999
Q ss_pred CCc---hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 024531 165 ENN---VKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEH 214 (266)
Q Consensus 165 p~~---~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~ 214 (266)
|++ +.+++.+|.++..+|++++|+..|++++...|+++.+......+...
T Consensus 70 p~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l 122 (129)
T 2xev_A 70 PTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSI 122 (129)
T ss_dssp TTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHH
Confidence 999 88999999999999999999999999999999999888777766543
No 30
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.66 E-value=6.6e-16 Score=145.52 Aligned_cols=125 Identities=16% Similarity=0.055 Sum_probs=115.2
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHh
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 159 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~ 159 (266)
+..+..+..+|..+...|++++|+..|+++++++|+... +++|+|.++..+|++++|+..|++
T Consensus 40 P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~-----------------a~~nLg~~l~~~g~~~~A~~~~~k 102 (723)
T 4gyw_A 40 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFAD-----------------AYSNMGNTLKEMQDVQGALQCYTR 102 (723)
T ss_dssp SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHcCCHHHHHHHHHH
Confidence 344677889999999999999999999999999999765 699999999999999999999999
Q ss_pred HhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 024531 160 VLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKK 221 (266)
Q Consensus 160 al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~ 221 (266)
+++++|++..+++++|.+|..+|++++|+.+|+++++++|++..++..|+.+...+.+..++
T Consensus 103 Al~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A 164 (723)
T 4gyw_A 103 AIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDY 164 (723)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTTH
T ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHHH
Confidence 99999999999999999999999999999999999999999999999999987766554433
No 31
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.66 E-value=4.3e-16 Score=136.61 Aligned_cols=122 Identities=13% Similarity=0.049 Sum_probs=70.4
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhC-HHHHHHHHH
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKR-YEEAIGQCS 158 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~-~~~A~~~~~ 158 (266)
+.....+...|..+...|++++|+..|.++|.++|+... +++++|.++..+|+ +++|+.+|+
T Consensus 94 p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~-----------------a~~~~g~~l~~~g~d~~eAl~~~~ 156 (382)
T 2h6f_A 94 DKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYT-----------------VWHFRRVLLKSLQKDLHEEMNYIT 156 (382)
T ss_dssp HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHH-----------------HHHHHHHHHHHcccCHHHHHHHHH
Confidence 445666777888888888888888888888888887544 34445555555553 555555555
Q ss_pred hHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHH
Q 024531 159 LVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAV 218 (266)
Q Consensus 159 ~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~ 218 (266)
+++.++|++..+|+++|.++..+|++++|+.+|++++.++|+|..++..++.+...+++.
T Consensus 157 ~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~ 216 (382)
T 2h6f_A 157 AIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLW 216 (382)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCCh
Confidence 555555555555555555555555555555555555555555444444444444444333
No 32
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.66 E-value=1.4e-15 Score=111.60 Aligned_cols=116 Identities=23% Similarity=0.233 Sum_probs=108.3
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
....+...|..++..|+|++|+..|.+++...|.+.. ++.++|.++...|++++|+..+++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~-----------------~~~~la~~~~~~~~~~~A~~~~~~a~ 77 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAK-----------------LYSNRAACYTKLLEFQLALKDCEECI 77 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHH-----------------HHHHHHHHHTTTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHH-----------------HHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 4678889999999999999999999999999988654 69999999999999999999999999
Q ss_pred cCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 024531 162 GEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEH 214 (266)
Q Consensus 162 ~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~ 214 (266)
.++|.+..+++.+|.++..+|++++|+..|++++.++|++..+...+..+...
T Consensus 78 ~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 130 (133)
T 2lni_A 78 QLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMA 130 (133)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHH
T ss_pred HhCCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988888877543
No 33
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=2.6e-15 Score=112.33 Aligned_cols=116 Identities=31% Similarity=0.466 Sum_probs=106.5
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
+..+...|..++..|+|++|+..|.+++...|+... ...++.++|.++...|++++|+..+++++.
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~--------------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 93 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQD--------------QAVLHRNRAACHLKLEDYDKAETEASKAIE 93 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHH--------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchH--------------HHHHHHHHHHHHHHHccHHHHHHHHHHHHh
Confidence 677889999999999999999999999999987421 233699999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 024531 163 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLA 212 (266)
Q Consensus 163 l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~ 212 (266)
++|+++.+++.+|.++..+|++++|+..|++++.++|++..+...+..+.
T Consensus 94 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 94 KDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HTSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred hCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988777663
No 34
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.64 E-value=4.1e-15 Score=108.46 Aligned_cols=119 Identities=18% Similarity=0.180 Sum_probs=107.8
Q ss_pred HHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhH
Q 024531 81 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 160 (266)
Q Consensus 81 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~a 160 (266)
+.+..+...|..++..|+++.|+..|.+++...|.... ++.++|.++...|++++|+.++.++
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~-----------------~~~~la~~~~~~~~~~~A~~~~~~~ 64 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMT-----------------YITNQAAVYFEKGDYNKCRELCEKA 64 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHH-----------------HHHHHHHHHHHhccHHHHHHHHHHH
Confidence 35677889999999999999999999999999988654 6899999999999999999999999
Q ss_pred hcCCCCc-------hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q 024531 161 LGEDENN-------VKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKA 217 (266)
Q Consensus 161 l~l~p~~-------~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~ 217 (266)
+.++|.+ ..+++.+|.++..+|++++|+..|++++.+.| ++.+...+..+...+++
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 65 IEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKE 127 (131)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHH
T ss_pred HhhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHH
Confidence 9998877 89999999999999999999999999999999 68888888877655544
No 35
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.63 E-value=1.9e-15 Score=132.45 Aligned_cols=138 Identities=12% Similarity=0.036 Sum_probs=118.5
Q ss_pred HHHHHHHHHhHHHHhhcc-HHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHh
Q 024531 81 GAADRRKMDGNALFKEEK-LEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 159 (266)
Q Consensus 81 ~~~~~~~~~g~~~~~~g~-~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~ 159 (266)
.....+..+|..+...|+ +++|+..|.++|.++|++.. +++++|.++..+|++++|+.+|++
T Consensus 129 ~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~-----------------a~~~~g~~~~~~g~~~eAl~~~~k 191 (382)
T 2h6f_A 129 ANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQ-----------------VWHHRRVLVEWLRDPSQELEFIAD 191 (382)
T ss_dssp TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHHTCCTTHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHH-----------------HHHHHHHHHHHccCHHHHHHHHHH
Confidence 446677889999999997 99999999999999999766 699999999999999999999999
Q ss_pred HhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHH-HHH----HHHHHhcccCCCC
Q 024531 160 VLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAV-YKK----QKEIYKGIFGPRP 234 (266)
Q Consensus 160 al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~-~~~----~~~~~~k~~~~~~ 234 (266)
+|.++|++..+|+++|.++..+|++++|+.+|+++++++|++..++..++.+...+... .++ +-..|.+.+...+
T Consensus 192 al~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l~P 271 (382)
T 2h6f_A 192 ILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVP 271 (382)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHST
T ss_pred HHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999887662222 222 2355777765544
Q ss_pred C
Q 024531 235 E 235 (266)
Q Consensus 235 ~ 235 (266)
.
T Consensus 272 ~ 272 (382)
T 2h6f_A 272 H 272 (382)
T ss_dssp T
T ss_pred C
Confidence 4
No 36
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.63 E-value=1.2e-15 Score=116.24 Aligned_cols=103 Identities=21% Similarity=0.187 Sum_probs=93.6
Q ss_pred hhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCH----------HHHHHHHHhHhcCC
Q 024531 95 KEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRY----------EEAIGQCSLVLGED 164 (266)
Q Consensus 95 ~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~----------~~A~~~~~~al~l~ 164 (266)
+.+.|++|+..|.++++++|.+.. +++|+|.++..++++ ++|+..|++||+++
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~ae-----------------a~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ld 76 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDAD-----------------NLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLID 76 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhHHHHHHHHHHHHHHHCCCCHH-----------------HHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhC
Confidence 447899999999999999999776 699999999999875 59999999999999
Q ss_pred CCchHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 024531 165 ENNVKALFRRGKARAELG-----------QTDAAREDFLKAGKFAPEDKSIARELRLLAEH 214 (266)
Q Consensus 165 p~~~~a~~~~g~~~~~~g-----------~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~ 214 (266)
|++..+|+++|.+|..+| ++++|+.+|++|++++|++...++.+..+.+.
T Consensus 77 P~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ka 137 (158)
T 1zu2_A 77 PKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKA 137 (158)
T ss_dssp TTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTH
T ss_pred cCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhC
Confidence 999999999999999985 89999999999999999999888887766443
No 37
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.62 E-value=3e-16 Score=119.84 Aligned_cols=118 Identities=14% Similarity=-0.048 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHH
Q 024531 100 EEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARA 179 (266)
Q Consensus 100 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 179 (266)
-.+-..|.+++.++|++.. +++++|.++...|++++|+..|++++.++|+++.+|+.+|.++.
T Consensus 19 ~~~~~~l~~al~l~p~~~~-----------------~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~ 81 (151)
T 3gyz_A 19 INSGATLKDINAIPDDMMD-----------------DIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQ 81 (151)
T ss_dssp HHTSCCTGGGCCSCHHHHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHCCCCHHHHhCCCHHHHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 3344557778888888655 69999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 024531 180 ELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPE 235 (266)
Q Consensus 180 ~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~ 235 (266)
.+|+|++|+.+|++++.++|+++.++..++.+...+++..++... |++.+...++
T Consensus 82 ~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg~~~eA~~~-~~~al~l~~~ 136 (151)
T 3gyz_A 82 IKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKEC-FELVIQHSND 136 (151)
T ss_dssp HTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHTTCHHHHHHH-HHHHHHHCCC
T ss_pred HHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHH-HHHHHHhCCC
Confidence 999999999999999999999999999999999888888766655 7887766554
No 38
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.62 E-value=1.1e-14 Score=113.51 Aligned_cols=123 Identities=11% Similarity=0.035 Sum_probs=99.2
Q ss_pred HHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhh--------chhHHHH---H------HHhhhhhhhhHHHH
Q 024531 81 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQL--------FGKYRDM---A------LAVKNPCHLNMAAC 143 (266)
Q Consensus 81 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~--------~~~~~~~---~------~~l~~~~~~n~a~~ 143 (266)
..+..+..+|..++..|++++|+..+.+++...|....... .+..... . ..-...++..+|.+
T Consensus 37 ~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~ 116 (184)
T 3vtx_A 37 NNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLV 116 (184)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 34567788888999999999999999999888887543311 1111111 0 11124478899999
Q ss_pred HHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH
Q 024531 144 LLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKS 203 (266)
Q Consensus 144 ~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~ 203 (266)
+..+|++++|+..|+++++++|.++.+++++|.+|..+|++++|+.+|+++++++|+++.
T Consensus 117 ~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~a~ 176 (184)
T 3vtx_A 117 YDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEKKAK 176 (184)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHHHHH
T ss_pred HHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCccCHH
Confidence 999999999999999999999999999999999999999999999999999999998654
No 39
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.61 E-value=1.1e-14 Score=117.55 Aligned_cols=118 Identities=16% Similarity=0.121 Sum_probs=108.8
Q ss_pred HHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcC
Q 024531 84 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE 163 (266)
Q Consensus 84 ~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l 163 (266)
..+...|..++..|+|++|+..|.+++...|.... ++.++|.+|..+|++++|+..+++++.+
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~-----------------~~~~l~~~~~~~~~~~~A~~~~~~al~~ 105 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLAN-----------------AYIGKSAAYRDMKNNQEYIATLTEGIKA 105 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHH-----------------HHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 45667999999999999999999999999998655 6999999999999999999999999999
Q ss_pred CCCch-------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--CHHHHHHHHHHHHHHHHH
Q 024531 164 DENNV-------KALFRRGKARAELGQTDAAREDFLKAGKFAPE--DKSIARELRLLAEHEKAV 218 (266)
Q Consensus 164 ~p~~~-------~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~--~~~~~~~l~~l~~~~~~~ 218 (266)
+|+++ .+++.+|.++..+|++++|+..|+++++++|+ +..+...++.+...++..
T Consensus 106 ~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 106 VPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp STTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Confidence 99998 77999999999999999999999999999999 999999999887665554
No 40
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.60 E-value=1.4e-14 Score=121.61 Aligned_cols=102 Identities=32% Similarity=0.370 Sum_probs=97.6
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
+..+..+|+.++..|+|++|+..|.+++...|.+.. +++++|.+|..+|++++|+.++++++.
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------~~~~la~~~~~~~~~~~A~~~~~~al~ 66 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAV-----------------YYTNRALCYLKMQQPEQALADCRRALE 66 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHH-----------------HHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 567889999999999999999999999999998665 699999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 024531 163 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPED 201 (266)
Q Consensus 163 l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~ 201 (266)
++|++..+++++|.++..+|++++|+..|++++.++|++
T Consensus 67 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 67 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp SCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 999999999999999999999999999999999999976
No 41
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.60 E-value=4.3e-14 Score=101.94 Aligned_cols=114 Identities=26% Similarity=0.336 Sum_probs=106.2
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
+..+...|..++..|++++|+..|.+++...|.... ++.++|.++...|++++|+..+++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~-----------------~~~~la~~~~~~~~~~~A~~~~~~~~~ 71 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAE-----------------AWYNLGNAYYKQGDYDEAIEYYQKALE 71 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHH-----------------HHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 567788999999999999999999999999887554 588999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 024531 163 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAE 213 (266)
Q Consensus 163 l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~ 213 (266)
.+|.++.+++.+|.++..+|++++|+..|++++.++|+++.+...+..+..
T Consensus 72 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 122 (125)
T 1na0_A 72 LDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 122 (125)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988887653
No 42
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.60 E-value=2.3e-14 Score=114.80 Aligned_cols=128 Identities=13% Similarity=0.053 Sum_probs=93.5
Q ss_pred HhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCch
Q 024531 89 DGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNV 168 (266)
Q Consensus 89 ~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~ 168 (266)
+|..++..|++++|+..|.++++++|++.. ++.++|.++...|++++|+.+|+++++++|+++
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~ 122 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNNVD-----------------CLEACAEMQVCRGQEKDALRMYEKILQLEADNL 122 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH
Confidence 999999999999999999999999999766 699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCC--HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 024531 169 KALFRRGKARAELGQ--TDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPE 235 (266)
Q Consensus 169 ~a~~~~g~~~~~~g~--~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~ 235 (266)
.+++++|.+|+.+|+ ...+...|.+++...|.+ .+...++.+....++. ++....|.+.+...|.
T Consensus 123 ~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~a~~~~g~~~~~~~~~-~~A~~~~~~al~l~P~ 189 (208)
T 3urz_A 123 AANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQ-YARYRDGLSKLFTTRY-EKARNSLQKVILRFPS 189 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHH-HHHHHHHHHHHHHHTH-HHHHHHHHHHTTTSCC
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchh-HHHHHHHHHHHHccCH-HHHHHHHHHHHHhCCC
Confidence 999999998876654 344555566555333221 1222333333333433 3344446666665554
No 43
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.60 E-value=3e-15 Score=110.62 Aligned_cols=101 Identities=14% Similarity=0.053 Sum_probs=92.5
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHE 215 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~ 215 (266)
++.++|.++++.|+|++|+..|+++++++|.++.+++++|.++..+|++++|+.+|+++++++|++..++..++.+...+
T Consensus 15 ~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~ 94 (126)
T 4gco_A 15 EEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVAM 94 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHhcccCCCCCCc
Q 024531 216 KAVYKKQKEIYKGIFGPRPEPK 237 (266)
Q Consensus 216 ~~~~~~~~~~~~k~~~~~~~~~ 237 (266)
++..++.. .|++.+...|...
T Consensus 95 ~~~~~A~~-~~~~al~l~P~~~ 115 (126)
T 4gco_A 95 REWSKAQR-AYEDALQVDPSNE 115 (126)
T ss_dssp TCHHHHHH-HHHHHHHHCTTCH
T ss_pred CCHHHHHH-HHHHHHHHCcCCH
Confidence 87766554 4788887766544
No 44
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.59 E-value=1.6e-14 Score=115.08 Aligned_cols=134 Identities=16% Similarity=0.123 Sum_probs=109.4
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
.+..++..|..++..|+|++|+..|.+++. | ... ++.++|.++...|++++|+..|++++
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~--~-~~~-----------------~~~~lg~~~~~~g~~~~A~~~~~~al 64 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQD--P-HSR-----------------ICFNIGCMYTILKNMTEAEKAFTRSI 64 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSSS--C-CHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHcC--C-ChH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 455677889999999999999999998862 2 222 58899999999999999999999999
Q ss_pred cCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH----------------HHHHHHHHHHHHHHHHHHHHHHH
Q 024531 162 GEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK----------------SIARELRLLAEHEKAVYKKQKEI 225 (266)
Q Consensus 162 ~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~----------------~~~~~l~~l~~~~~~~~~~~~~~ 225 (266)
.++|+++.+++++|.++..+|++++|+.+|++++.+.|++. .+...++.+...+++..++. ..
T Consensus 65 ~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~-~~ 143 (213)
T 1hh8_A 65 NRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAE-EQ 143 (213)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHH-HH
T ss_pred HhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHH-HH
Confidence 99999999999999999999999999999999999888776 88888888877776665554 44
Q ss_pred HhcccCCCCCC
Q 024531 226 YKGIFGPRPEP 236 (266)
Q Consensus 226 ~~k~~~~~~~~ 236 (266)
|.+++...+..
T Consensus 144 ~~~al~~~p~~ 154 (213)
T 1hh8_A 144 LALATSMKSEP 154 (213)
T ss_dssp HHHHHTTCCSG
T ss_pred HHHHHHcCccc
Confidence 77777766554
No 45
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.59 E-value=3.1e-15 Score=108.67 Aligned_cols=97 Identities=21% Similarity=0.115 Sum_probs=85.2
Q ss_pred hhccHHHHHHHHHHHHhh---hccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHH
Q 024531 95 KEEKLEEAMQQYEMAIAY---MGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKAL 171 (266)
Q Consensus 95 ~~g~~~~A~~~y~~al~~---~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 171 (266)
..|++++|+..|.+++.. +|.... ++.++|.+|..+|++++|+..++++++++|+++.++
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~-----------------~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 64 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAE-----------------CYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALR 64 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHH
Confidence 368999999999999999 565433 699999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHH
Q 024531 172 FRRGKARAELGQTDAAREDFLKAGKFAPEDKSIAREL 208 (266)
Q Consensus 172 ~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l 208 (266)
+++|.++..+|++++|+..|++++.++|+++.+....
T Consensus 65 ~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 101 (117)
T 3k9i_A 65 VFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYK 101 (117)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 9999999999999999999999999999998876433
No 46
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.57 E-value=6e-15 Score=133.02 Aligned_cols=129 Identities=23% Similarity=0.296 Sum_probs=111.1
Q ss_pred HHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhH
Q 024531 81 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 160 (266)
Q Consensus 81 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~a 160 (266)
+.+..+..+|..++..|+|++|+..|+++++..|.... ++.++|.+|..+|++++|+.+++++
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~-----------------~~~~lg~~~~~~g~~~~A~~~~~~a 66 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAI-----------------YYGNRSLAYLRTECYGYALGDATRA 66 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHH-----------------HHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 45666778899999999999999999999999998655 6999999999999999999999999
Q ss_pred hcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH--HHHHHHHHHHHHHHh
Q 024531 161 LGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLA--EHEKAVYKKQKEIYK 227 (266)
Q Consensus 161 l~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~--~~~~~~~~~~~~~~~ 227 (266)
++++|+++.+++++|.+|..+|++++|+..|+++++++|++..+...+..+. ..+++.+++. ..+.
T Consensus 67 l~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~-~~~~ 134 (477)
T 1wao_1 67 IELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAI-AGDE 134 (477)
T ss_dssp HHSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC------
T ss_pred HHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHh-cccc
Confidence 9999999999999999999999999999999999999999999998888873 3334443333 3355
No 47
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.57 E-value=4.4e-15 Score=112.77 Aligned_cols=116 Identities=11% Similarity=0.019 Sum_probs=102.5
Q ss_pred HHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcC
Q 024531 103 MQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELG 182 (266)
Q Consensus 103 ~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g 182 (266)
-..|.+++.+.|.+.. +++++|.++...|++++|+..+++++.++|+++.+++.+|.++..+|
T Consensus 7 ~~~~~~al~~~p~~~~-----------------~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g 69 (148)
T 2vgx_A 7 GGTIAMLNEISSDTLE-----------------QLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMG 69 (148)
T ss_dssp CCSHHHHTTCCHHHHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHcCCHhhHH-----------------HHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHh
Confidence 3467888888887554 68999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 024531 183 QTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEP 236 (266)
Q Consensus 183 ~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~~ 236 (266)
+|++|+.+|++++.++|+++.+...++.+...+++..++... |.+.+...+..
T Consensus 70 ~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~~A~~~-~~~al~~~p~~ 122 (148)
T 2vgx_A 70 QYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGELAEAESG-LFLAQELIANX 122 (148)
T ss_dssp CHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHH-HHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHcCCHHHHHHH-HHHHHHHCcCC
Confidence 999999999999999999999999999998888877666554 77777665543
No 48
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.57 E-value=3.4e-14 Score=117.29 Aligned_cols=140 Identities=14% Similarity=0.163 Sum_probs=116.9
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
.+..+...|..++..|+|++|+..|.+++...|.+.. ...+++++|.+|..+|++++|+..|++++
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~--------------~~~a~~~lg~~~~~~~~~~~A~~~~~~~l 79 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEW--------------AADAQFYLARAYYQNKEYLLAASEYERFI 79 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTT--------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcc--------------hHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 3678899999999999999999999999999998632 23379999999999999999999999999
Q ss_pred cCCCCc---hHHHHHHHHHHHH--------cCCHHHHHHHHHHHHhhCCCCHHHH-----------------HHHHHHHH
Q 024531 162 GEDENN---VKALFRRGKARAE--------LGQTDAAREDFLKAGKFAPEDKSIA-----------------RELRLLAE 213 (266)
Q Consensus 162 ~l~p~~---~~a~~~~g~~~~~--------~g~~~~A~~~~~~al~l~p~~~~~~-----------------~~l~~l~~ 213 (266)
.++|++ +.+++.+|.++.. +|++++|+..|++++..+|+++.+. ..++.+..
T Consensus 80 ~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~ 159 (261)
T 3qky_A 80 QIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYE 159 (261)
T ss_dssp HHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998854 6789999999999 9999999999999999999986665 45566666
Q ss_pred HHHHHHHHHHHHHhcccCCCCCC
Q 024531 214 HEKAVYKKQKEIYKGIFGPRPEP 236 (266)
Q Consensus 214 ~~~~~~~~~~~~~~k~~~~~~~~ 236 (266)
..++..++.. .|++++...|..
T Consensus 160 ~~g~~~~A~~-~~~~~l~~~p~~ 181 (261)
T 3qky_A 160 RRELYEAAAV-TYEAVFDAYPDT 181 (261)
T ss_dssp HTTCHHHHHH-HHHHHHHHCTTS
T ss_pred HccCHHHHHH-HHHHHHHHCCCC
Confidence 6666655444 477777655543
No 49
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.56 E-value=2.8e-14 Score=130.98 Aligned_cols=139 Identities=14% Similarity=0.049 Sum_probs=122.5
Q ss_pred HHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHH
Q 024531 79 RIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCS 158 (266)
Q Consensus 79 ~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~ 158 (266)
.+.....+...|..++..|++++|+..|+++++..|++.. ++.++|.+|..+|++++|+..++
T Consensus 19 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------~~~~lg~~~~~~g~~~~A~~~~~ 81 (568)
T 2vsy_A 19 RPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPE-----------------AVARLGRVRWTQQRHAEAAVLLQ 81 (568)
T ss_dssp --CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHCCCHHHHHHHHH
Confidence 3445678899999999999999999999999999998655 69999999999999999999999
Q ss_pred hHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHhcccCCCCC
Q 024531 159 LVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHE---KAVYKKQKEIYKGIFGPRPE 235 (266)
Q Consensus 159 ~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~---~~~~~~~~~~~~k~~~~~~~ 235 (266)
++++++|++..+++++|.++..+|++++|+..|+++++++|++..+...+..+...+ ++..++. ..|++.+...+.
T Consensus 82 ~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~-~~~~~al~~~p~ 160 (568)
T 2vsy_A 82 QASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLS-AQVRAAVAQGVG 160 (568)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHH-HHHHHHHHHTCC
T ss_pred HHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHH-HHHHHHHhcCCc
Confidence 999999999999999999999999999999999999999999999999999998777 6655444 446666655444
No 50
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.55 E-value=5.9e-14 Score=113.62 Aligned_cols=110 Identities=14% Similarity=0.095 Sum_probs=96.4
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
+..++..|..++..|+|++|+..|.+++...|.+.. ...+++++|.+|.+.|+|++|+..|+++++
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~--------------~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPY--------------SQQVQLDLIYAYYKNADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTT--------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChH--------------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 456788999999999999999999999999887543 223689999999999999999999999999
Q ss_pred CCCCchH---HHHHHHHHHHH------------------cCCHHHHHHHHHHHHhhCCCCHHHHH
Q 024531 163 EDENNVK---ALFRRGKARAE------------------LGQTDAAREDFLKAGKFAPEDKSIAR 206 (266)
Q Consensus 163 l~p~~~~---a~~~~g~~~~~------------------~g~~~~A~~~~~~al~l~p~~~~~~~ 206 (266)
.+|++.. +++.+|.++.. +|++++|+..|+++++..|+++.+..
T Consensus 70 ~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~ 134 (225)
T 2yhc_A 70 LNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTD 134 (225)
T ss_dssp HCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHH
T ss_pred HCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHH
Confidence 9999875 89999999986 67999999999999999999875543
No 51
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.55 E-value=1.1e-13 Score=114.14 Aligned_cols=139 Identities=15% Similarity=0.118 Sum_probs=117.8
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHH--------hhCHHHHH
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK--------LKRYEEAI 154 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~--------~~~~~~A~ 154 (266)
...+...|..++..|+|++|+..|.+++...|.+.. ...+++++|.++.. .|++++|+
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~--------------~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~ 117 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPR--------------VPQAEYERAMCYYKLSPPYELDQTDTRKAI 117 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTT--------------HHHHHHHHHHHHHHHCCCTTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCch--------------hHHHHHHHHHHHHHhcccccccchhHHHHH
Confidence 567889999999999999999999999999987543 23379999999999 99999999
Q ss_pred HHHHhHhcCCCCchHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHhhCCC---CHHHHHHHHHHHHH
Q 024531 155 GQCSLVLGEDENNVKAL-----------------FRRGKARAELGQTDAAREDFLKAGKFAPE---DKSIARELRLLAEH 214 (266)
Q Consensus 155 ~~~~~al~l~p~~~~a~-----------------~~~g~~~~~~g~~~~A~~~~~~al~l~p~---~~~~~~~l~~l~~~ 214 (266)
..+++++..+|++..+. +.+|.+|..+|+|++|+..|++++...|+ .+.++..++.+...
T Consensus 118 ~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~ 197 (261)
T 3qky_A 118 EAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIA 197 (261)
T ss_dssp HHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHH
Confidence 99999999999987666 89999999999999999999999999998 46678888887765
Q ss_pred H----------HHHHHHHHHHHhcccCCCCCC
Q 024531 215 E----------KAVYKKQKEIYKGIFGPRPEP 236 (266)
Q Consensus 215 ~----------~~~~~~~~~~~~k~~~~~~~~ 236 (266)
+ ++. ++....|+++....|+.
T Consensus 198 ~g~~~~~~~~~~~~-~~A~~~~~~~~~~~p~~ 228 (261)
T 3qky_A 198 YAEQSVRARQPERY-RRAVELYERLLQIFPDS 228 (261)
T ss_dssp HHHTSCGGGHHHHH-HHHHHHHHHHHHHCTTC
T ss_pred hcccchhhcccchH-HHHHHHHHHHHHHCCCC
Confidence 5 333 44555678887665543
No 52
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.55 E-value=9.7e-14 Score=101.15 Aligned_cols=130 Identities=22% Similarity=0.242 Sum_probs=113.4
Q ss_pred HHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcC
Q 024531 84 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE 163 (266)
Q Consensus 84 ~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l 163 (266)
..+...|..++..|++++|+..|.+++...|.... ++.++|.++...|++++|+..+.+++..
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~-----------------~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 64 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAE-----------------AWYNLGNAYYKQGDYDEAIEYYQKALEL 64 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchh-----------------HHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 35678899999999999999999999999887544 5889999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 024531 164 DENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFG 231 (266)
Q Consensus 164 ~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~ 231 (266)
+|.+..+++.+|.++...|++++|+..+++++...|++..+...+..+....++..++. ..+.+++.
T Consensus 65 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~-~~~~~~~~ 131 (136)
T 2fo7_A 65 DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAI-EYYQKALE 131 (136)
T ss_dssp CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHH-HHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHH-HHHHHHHc
Confidence 99999999999999999999999999999999999999999888888876666555443 33555543
No 53
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.55 E-value=1.3e-13 Score=106.99 Aligned_cols=113 Identities=12% Similarity=0.118 Sum_probs=102.1
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHH-HHHhhCH--HHHHHHHH
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAAC-LLKLKRY--EEAIGQCS 158 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~-~~~~~~~--~~A~~~~~ 158 (266)
....+...|..++..|++++|+..|.+++...|.+.. ++.++|.+ +...|++ ++|+..++
T Consensus 43 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~-----------------~~~~la~~l~~~~~~~~~~~A~~~~~ 105 (177)
T 2e2e_A 43 NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAE-----------------LYAALATVLYYQASQHMTAQTRAMID 105 (177)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHH-----------------HHHHHHHHHHHHTTTCCCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH-----------------HHHHHHHHHHHhcCCcchHHHHHHHH
Confidence 4567889999999999999999999999999998655 58899999 8899998 99999999
Q ss_pred hHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 024531 159 LVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLL 211 (266)
Q Consensus 159 ~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l 211 (266)
+++.++|++..+++.+|.++..+|++++|+..|++++.++|++......+..+
T Consensus 106 ~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i 158 (177)
T 2e2e_A 106 KALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQLVESI 158 (177)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHH
T ss_pred HHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHH
Confidence 99999999999999999999999999999999999999999987665555444
No 54
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.54 E-value=3.4e-14 Score=133.40 Aligned_cols=145 Identities=13% Similarity=0.012 Sum_probs=123.3
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
+..+..+|..++..|+|++|+..|+++++.+|++.. +++++|.++..+|++++|+..|+++++
T Consensus 433 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------a~~~lg~~~~~~g~~~~A~~~~~~al~ 495 (681)
T 2pzi_A 433 VELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWR-----------------LVWYRAVAELLTGDYDSATKHFTEVLD 495 (681)
T ss_dssp SHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 356778899999999999999999999999999766 699999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcccchh
Q 024531 163 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPKQKKNW 242 (266)
Q Consensus 163 l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 242 (266)
++|++..+++++|.++..+|+|++ +.+|+++++++|++..++..++.+...+++..++.. .|++++...+.. ..+|
T Consensus 496 l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~-~~~~al~l~P~~--~~a~ 571 (681)
T 2pzi_A 496 TFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVR-TLDEVPPTSRHF--TTAR 571 (681)
T ss_dssp HSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH-HHHTSCTTSTTH--HHHH
T ss_pred hCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHH-HHHhhcccCccc--HHHH
Confidence 999999999999999999999999 999999999999999999999999877777765544 478887655543 2444
Q ss_pred HHHhHH
Q 024531 243 LIIFWQ 248 (266)
Q Consensus 243 ~~~~~~ 248 (266)
......
T Consensus 572 ~~~~~~ 577 (681)
T 2pzi_A 572 LTSAVT 577 (681)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444333
No 55
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.53 E-value=2.1e-13 Score=112.37 Aligned_cols=126 Identities=18% Similarity=0.086 Sum_probs=65.0
Q ss_pred HHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhh--------hchhHHHH---HH---------HhhhhhhhhHHHH
Q 024531 84 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQ--------LFGKYRDM---AL---------AVKNPCHLNMAAC 143 (266)
Q Consensus 84 ~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~--------~~~~~~~~---~~---------~l~~~~~~n~a~~ 143 (266)
+.+...|..++..|+|++|+..|.+++...|.+...- ..+...+- .. .....++.++|.+
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~ 83 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKI 83 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHH
Confidence 3456777888888888888888888888877654310 00000000 00 0011124445555
Q ss_pred HHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q 024531 144 LLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELR 209 (266)
Q Consensus 144 ~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~ 209 (266)
+...|++++|+.+++++++++|.++.+++.+|.++..+|++++|+..|++++.++|++..+...++
T Consensus 84 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~ 149 (272)
T 3u4t_A 84 LMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELG 149 (272)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHH
Confidence 555555555555555555555555555555555555555555555555555555555555544444
No 56
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.53 E-value=3.3e-13 Score=111.11 Aligned_cols=133 Identities=21% Similarity=0.087 Sum_probs=112.7
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHh
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 159 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~ 159 (266)
+..+..+...|..++..|++++|+..|.+++...|.... ++.++|.++...|++++|+.++++
T Consensus 40 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~-----------------~~~~la~~~~~~~~~~~A~~~~~~ 102 (275)
T 1xnf_A 40 DERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPE-----------------VFNYLGIYLTQAGNFDAAYEAFDS 102 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHH-----------------HHHHHHHHHHHccCHHHHHHHHHH
Confidence 355778889999999999999999999999999998655 699999999999999999999999
Q ss_pred HhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 024531 160 VLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFG 231 (266)
Q Consensus 160 al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~ 231 (266)
++.++|.++.+++.+|.++..+|++++|+..|++++.++|++......+..+ ...+... +....+.+.+.
T Consensus 103 al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~-~A~~~~~~~~~ 172 (275)
T 1xnf_A 103 VLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA-EQKLDEK-QAKEVLKQHFE 172 (275)
T ss_dssp HHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH-HHHHCHH-HHHHHHHHHHH
T ss_pred HHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH-HHhcCHH-HHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999998766555544 3333333 33334444443
No 57
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.53 E-value=2.7e-13 Score=119.71 Aligned_cols=152 Identities=23% Similarity=0.260 Sum_probs=125.3
Q ss_pred HHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcC
Q 024531 84 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE 163 (266)
Q Consensus 84 ~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l 163 (266)
......|..++..|++++|+..|.+++...|.+... ...++.++|.++.+.|++++|+..+++++.+
T Consensus 258 ~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~-------------~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 324 (450)
T 2y4t_A 258 NKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEY-------------TVRSKERICHCFSKDEKPVEAIRVCSEVLQM 324 (450)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSHHH-------------HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchHH-------------HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 334556999999999999999999999999885431 3346899999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccc---c
Q 024531 164 DENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPKQK---K 240 (266)
Q Consensus 164 ~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~---~ 240 (266)
+|+++.+++.+|.++..+|++++|+..|+++++++|+++.+...+..+....+. .....++..++.....+.. .
T Consensus 325 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~---~~~~~~y~~lg~~~~~~~~~~~~ 401 (450)
T 2y4t_A 325 EPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQ---SQKRDYYKILGVKRNAKKQEIIK 401 (450)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHH---HHSCCSGGGSCSSTTCCTTHHHH
T ss_pred CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhhc---ccchhHHHHhCCCccCCHHHHHH
Confidence 999999999999999999999999999999999999999999999887655444 3334566777766655443 5
Q ss_pred hhHHHhHHHHH
Q 024531 241 NWLIIFWQLLV 251 (266)
Q Consensus 241 ~~~~~~~~~~~ 251 (266)
+|++...+|+.
T Consensus 402 ~y~~~~l~~~p 412 (450)
T 2y4t_A 402 AYRKLALQWHP 412 (450)
T ss_dssp HHHHHHHHSCG
T ss_pred HHHHHHHHhCC
Confidence 56555555543
No 58
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.52 E-value=7.7e-14 Score=98.85 Aligned_cols=101 Identities=20% Similarity=0.217 Sum_probs=94.4
Q ss_pred HHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCC
Q 024531 85 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED 164 (266)
Q Consensus 85 ~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~ 164 (266)
.+...|..++..|++++|+..|.+++...|.... ++.++|.++...|++++|+..+++++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~-----------------~~~~~a~~~~~~~~~~~A~~~~~~a~~~~ 70 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESK-----------------YWLMKGKALYNLERYEEAVDCYNYVINVI 70 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHH-----------------HHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 4567899999999999999999999999988655 58999999999999999999999999999
Q ss_pred CC--chHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCCCH
Q 024531 165 EN--NVKALFRRGKARAEL-GQTDAAREDFLKAGKFAPEDK 202 (266)
Q Consensus 165 p~--~~~a~~~~g~~~~~~-g~~~~A~~~~~~al~l~p~~~ 202 (266)
|. +..+++.+|.++..+ |++++|++++++++...|+++
T Consensus 71 ~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 71 EDEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp CCTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred cccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 99 999999999999999 999999999999999999753
No 59
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.52 E-value=2.2e-13 Score=104.98 Aligned_cols=131 Identities=19% Similarity=0.199 Sum_probs=95.1
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
...+...|..++..|++++|+..|.+++...|.... ++.++|.++...|++++|+..+++++.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~-----------------~~~~~a~~~~~~~~~~~A~~~~~~~~~ 104 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVK-----------------VATVLGLTYVQVQKYDLAVPLLIKVAE 104 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHH-----------------HHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 345566777777777777777777777777666443 577788888888888888888888888
Q ss_pred CCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 024531 163 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFG 231 (266)
Q Consensus 163 l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~ 231 (266)
.+|.++.+++.+|.++..+|++++|+..|++++..+|++..+...++.+....++..++. ..+.+++.
T Consensus 105 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~-~~~~~~~~ 172 (186)
T 3as5_A 105 ANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEAL-PHFKKANE 172 (186)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHH
T ss_pred cCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHHH-HHHHHHHH
Confidence 888888888888888888888888888888888888888777777777766655554433 33455443
No 60
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.52 E-value=6.4e-13 Score=113.06 Aligned_cols=122 Identities=22% Similarity=0.244 Sum_probs=109.5
Q ss_pred HHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcC
Q 024531 84 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE 163 (266)
Q Consensus 84 ~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l 163 (266)
......|..++..|++++|+..|.+++...|.+... ...++.++|.++...|++++|+..+++++.+
T Consensus 235 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~-------------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 235 NKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEY-------------TVRSKERICHCFSKDEKPVEAIRICSEVLQM 301 (359)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHH-------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHH-------------HHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 344566999999999999999999999999986432 3346888999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHH
Q 024531 164 DENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAV 218 (266)
Q Consensus 164 ~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~ 218 (266)
+|+++.+++.+|.++..+|++++|+..|+++++++|+++.+...+..+...+++.
T Consensus 302 ~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~ 356 (359)
T 3ieg_A 302 EPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRLLKQS 356 (359)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999887666553
No 61
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.52 E-value=1.6e-13 Score=123.47 Aligned_cols=133 Identities=14% Similarity=-0.062 Sum_probs=112.8
Q ss_pred HHHHHHHhHHHHhhccH-HHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 83 ADRRKMDGNALFKEEKL-EEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~-~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
+..+..+|..++..|+| ++|+..|.+++.++|.... ++.++|.+|...|++++|+..|++++
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~-----------------a~~~lg~~~~~~g~~~~A~~~~~~al 164 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVE-----------------AWNQLGEVYWKKGDVTSAHTCFSGAL 164 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 56677889999999999 9999999999999998655 68899999999999999999999999
Q ss_pred cCCCCchHHHHHHHHHHHHc---------CCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH--------HHHHHHHHH
Q 024531 162 GEDENNVKALFRRGKARAEL---------GQTDAAREDFLKAGKFAPEDKSIARELRLLAEHE--------KAVYKKQKE 224 (266)
Q Consensus 162 ~l~p~~~~a~~~~g~~~~~~---------g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~--------~~~~~~~~~ 224 (266)
+++|+ ..+++.+|.++..+ |++++|+..|+++++++|++..++..++.+...+ ++..++..
T Consensus 165 ~~~p~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~- 242 (474)
T 4abn_A 165 THCKN-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALS- 242 (474)
T ss_dssp TTCCC-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH-
T ss_pred hhCCC-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHH-
Confidence 99988 68899999999999 9999999999999999999999988888887766 66655444
Q ss_pred HHhcccCCCC
Q 024531 225 IYKGIFGPRP 234 (266)
Q Consensus 225 ~~~k~~~~~~ 234 (266)
.|.+.+...+
T Consensus 243 ~~~~al~~~p 252 (474)
T 4abn_A 243 AYAQAEKVDR 252 (474)
T ss_dssp HHHHHHHHCG
T ss_pred HHHHHHHhCC
Confidence 4677765433
No 62
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.52 E-value=2.1e-13 Score=110.99 Aligned_cols=112 Identities=13% Similarity=0.004 Sum_probs=59.9
Q ss_pred hHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchH
Q 024531 90 GNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVK 169 (266)
Q Consensus 90 g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~ 169 (266)
+..+...|++++|+..|.+++...|.... ++.++|.++...|++++|+..+++++.++|.++.
T Consensus 112 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 174 (258)
T 3uq3_A 112 ADILTKLRNAEKELKKAEAEAYVNPEKAE-----------------EARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDAR 174 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred hHHHHHHhHHHHHHHHHHHHHHcCcchHH-----------------HHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHH
Confidence 44555555555555555555555444322 3555555555555555555555555555555555
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHH
Q 024531 170 ALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAV 218 (266)
Q Consensus 170 a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~ 218 (266)
+++.+|.++..+|++++|+..|++++.++|++..+...++.+....++.
T Consensus 175 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~ 223 (258)
T 3uq3_A 175 GYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEY 223 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhH
Confidence 5555555555555555555555555555555555555555554444433
No 63
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.51 E-value=3.4e-14 Score=106.67 Aligned_cols=116 Identities=8% Similarity=0.030 Sum_probs=98.3
Q ss_pred HHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCC
Q 024531 104 QQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQ 183 (266)
Q Consensus 104 ~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~ 183 (266)
..|.+++...|.+.. +++++|.+++..|++++|+..|++++.++|+++.+++.+|.++..+|+
T Consensus 5 ~~l~~al~~~p~~~~-----------------~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 67 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLE-----------------QLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGL 67 (142)
T ss_dssp ----CCTTCCHHHHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHcCCHHHHH-----------------HHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhh
Confidence 456777777777544 588999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCc
Q 024531 184 TDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPK 237 (266)
Q Consensus 184 ~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~~~ 237 (266)
|++|+.+|++++.++|+++.+...++.+...+++..++... |.+.+...+...
T Consensus 68 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~-~~~al~~~p~~~ 120 (142)
T 2xcb_A 68 YEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESG-FYSARALAAAQP 120 (142)
T ss_dssp HHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHH-HHHHHHHHHTCG
T ss_pred HHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHH-HHHHHHhCCCCc
Confidence 99999999999999999999999999998888877665554 677776555433
No 64
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.51 E-value=2.8e-13 Score=121.88 Aligned_cols=123 Identities=15% Similarity=0.054 Sum_probs=114.1
Q ss_pred HHHHHHhHHHHhh---------ccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHh-------
Q 024531 84 DRRKMDGNALFKE---------EKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKL------- 147 (266)
Q Consensus 84 ~~~~~~g~~~~~~---------g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~------- 147 (266)
..+...|..+... |++++|+..|.+++++.|++.. ++.++|.+|..+
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------~~~~lg~~~~~~~~~~~~~ 233 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGR-----------------SWYILGNAYLSLYFNTGQN 233 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHHHHhhccc
Confidence 5677889999999 9999999999999999999765 699999999999
Q ss_pred -hCHHHHHHHHHhHhcCCC---CchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 024531 148 -KRYEEAIGQCSLVLGEDE---NNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQK 223 (266)
Q Consensus 148 -~~~~~A~~~~~~al~l~p---~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~ 223 (266)
|++++|+..|++++.++| +++.+++++|.+|..+|++++|+..|+++++++|++..++..+..+...+++..++..
T Consensus 234 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~~eAi~ 313 (474)
T 4abn_A 234 PKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTSLLE 313 (474)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999999999999999999999999888877665544
No 65
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.50 E-value=5e-13 Score=108.68 Aligned_cols=127 Identities=16% Similarity=0.089 Sum_probs=112.2
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
+..+...|..+...|++++|+..|.+++.+.|. +.++..+|++++|+..+++++.
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-------------------------~~~~~~~~~~~~a~~~~~~~~~ 133 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRT-------------------------ADILTKLRNAEKELKKAEAEAY 133 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-------------------------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCch-------------------------hHHHHHHhHHHHHHHHHHHHHH
Confidence 678889999999999999999999999998765 2457778999999999999999
Q ss_pred CCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 024531 163 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPE 235 (266)
Q Consensus 163 l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~ 235 (266)
.+|.++.+++.+|.++...|++++|+..|++++.++|++..+...++.+....++..++.. .+.+++...+.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~-~~~~al~~~~~ 205 (258)
T 3uq3_A 134 VNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIA-DCNKAIEKDPN 205 (258)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCTT
T ss_pred cCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHH-HHHHHHHhCHH
Confidence 9999999999999999999999999999999999999999999999999877777665544 46777665544
No 66
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.50 E-value=3.2e-13 Score=117.37 Aligned_cols=97 Identities=18% Similarity=0.108 Sum_probs=61.7
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHE 215 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~ 215 (266)
++.++|.++.+.|++++|+..++++++++|.++.+++.+|.++...|++++|+..|+++++++|++..+...+..+....
T Consensus 273 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 352 (388)
T 1w3b_A 273 AYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQ 352 (388)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHc
Confidence 46666666666666666666666666666666666666666666666666666666666666666666666666665555
Q ss_pred HHHHHHHHHHHhcccCCC
Q 024531 216 KAVYKKQKEIYKGIFGPR 233 (266)
Q Consensus 216 ~~~~~~~~~~~~k~~~~~ 233 (266)
++..++. ..|++++...
T Consensus 353 g~~~~A~-~~~~~a~~~~ 369 (388)
T 1w3b_A 353 GKLQEAL-MHYKEAIRIS 369 (388)
T ss_dssp TCCHHHH-HHHHHHHTTC
T ss_pred CCHHHHH-HHHHHHHhhC
Confidence 4443333 3355665543
No 67
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.50 E-value=1e-13 Score=112.01 Aligned_cols=133 Identities=15% Similarity=0.108 Sum_probs=104.6
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
....+...|..++..|++++|+..|.+++...|.... ++.++|.++...|++++|+..+++++
T Consensus 56 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~-----------------~~~~la~~~~~~~~~~~A~~~~~~~~ 118 (243)
T 2q7f_A 56 DAIPYINFANLLSSVNELERALAFYDKALELDSSAAT-----------------AYYGAGNVYVVKEMYKEAKDMFEKAL 118 (243)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchH-----------------HHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 4667788999999999999999999999999887544 57778888888888888888888888
Q ss_pred cCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 024531 162 GEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGP 232 (266)
Q Consensus 162 ~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~ 232 (266)
..+|.+..+++.+|.++..+|++++|+..|++++.++|++..+...++.+....++..++.. .+.+++..
T Consensus 119 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~-~~~~~~~~ 188 (243)
T 2q7f_A 119 RAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALS-QFAAVTEQ 188 (243)
T ss_dssp HHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHH-HHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHH-HHHHHHHh
Confidence 88888888888888888888888888888888888888888877777777666655544433 35555543
No 68
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.50 E-value=2.7e-13 Score=114.40 Aligned_cols=136 Identities=12% Similarity=0.031 Sum_probs=107.0
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHH----HHhhCHHHHHHHHH
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACL----LKLKRYEEAIGQCS 158 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~----~~~~~~~~A~~~~~ 158 (266)
...+...|..+...|++++|+..|.+++...|+.. ..+++.++ ...|++++|+..++
T Consensus 130 ~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~-------------------~~~l~~a~~~l~~~~~~~~eA~~~~~ 190 (291)
T 3mkr_A 130 LECMAMTVQILLKLDRLDLARKELKKMQDQDEDAT-------------------LTQLATAWVSLAAGGEKLQDAYYIFQ 190 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-------------------HHHHHHHHHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcH-------------------HHHHHHHHHHHHhCchHHHHHHHHHH
Confidence 45667788888888999999999999988887642 22333332 23478999999999
Q ss_pred hHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCc
Q 024531 159 LVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPK 237 (266)
Q Consensus 159 ~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~~~ 237 (266)
+++..+|+++.+++.+|.++..+|++++|+..|++++.++|++++++..+..+....++..++...+++++....|+..
T Consensus 191 ~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~ 269 (291)
T 3mkr_A 191 EMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHP 269 (291)
T ss_dssp HHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCh
Confidence 9999999999999999999999999999999999999999999999888888877777666666667777776655543
No 69
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.49 E-value=3.1e-14 Score=133.69 Aligned_cols=115 Identities=11% Similarity=0.026 Sum_probs=106.8
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
....+..+|..++..|+|++|+..|+++++++|++.. +++++|.++..+|++++ +..|++++
T Consensus 466 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~-----------------~~~~lg~~~~~~g~~~~-~~~~~~al 527 (681)
T 2pzi_A 466 RWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELA-----------------PKLALAATAELAGNTDE-HKFYQTVW 527 (681)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSH-----------------HHHHHHHHHHHHTCCCT-TCHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChH-----------------HHHHHHHHHHHcCChHH-HHHHHHHH
Confidence 3456778899999999999999999999999999765 69999999999999999 99999999
Q ss_pred cCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 024531 162 GEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEH 214 (266)
Q Consensus 162 ~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~ 214 (266)
+++|++..+++++|.++..+|++++|+.+|+++++++|++..++..+..+...
T Consensus 528 ~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~~~ 580 (681)
T 2pzi_A 528 STNDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTLLS 580 (681)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHTC-
T ss_pred HhCCchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999888887533
No 70
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.49 E-value=3.6e-13 Score=103.77 Aligned_cols=135 Identities=16% Similarity=0.118 Sum_probs=119.7
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
.+..+...|..++..|++++|+..|.+++...|.... ++.++|.++...|++++|+..+++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~A~~~~~~~~ 69 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVD-----------------VALHLGIAYVKTGAVDRGTELLERSL 69 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccChH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4667888999999999999999999999999887654 68999999999999999999999999
Q ss_pred cCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 024531 162 GEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRP 234 (266)
Q Consensus 162 ~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~ 234 (266)
..+|.+..+++.+|.++...|++++|...|++++..+|++..+...++.+....++..++.. .+.+++...+
T Consensus 70 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~-~~~~~~~~~~ 141 (186)
T 3as5_A 70 ADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAID-SFKIALGLRP 141 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCT
T ss_pred hcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHH-HHHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999988777666655444 4666665443
No 71
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.48 E-value=4.8e-14 Score=109.39 Aligned_cols=130 Identities=10% Similarity=-0.002 Sum_probs=110.8
Q ss_pred hHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchH
Q 024531 90 GNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVK 169 (266)
Q Consensus 90 g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~ 169 (266)
+..++..|++++|+..|.+++...|.+.. ++.++|.++...|++++|+..+.+++.++|+++.
T Consensus 17 ~~~~~~~~~~~~A~~~~~~al~~~p~~~~-----------------~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~ 79 (177)
T 2e2e_A 17 LHQFASQQNPEAQLQALQDKIRANPQNSE-----------------QWALLGEYYLWQNDYSNSLLAYRQALQLRGENAE 79 (177)
T ss_dssp TCCCC-----CCCCHHHHHHHHHCCSCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHH
T ss_pred hhhhhhccCHHHHHHHHHHHHHhCCCcHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH
Confidence 44567789999999999999999998665 6999999999999999999999999999999999
Q ss_pred HHHHHHHH-HHHcCCH--HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCc
Q 024531 170 ALFRRGKA-RAELGQT--DAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPK 237 (266)
Q Consensus 170 a~~~~g~~-~~~~g~~--~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~~~ 237 (266)
+++.+|.+ +...|++ ++|+..|++++.++|++..+...++.+....++..++.. .|.+++...+...
T Consensus 80 ~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~-~~~~al~~~p~~~ 149 (177)
T 2e2e_A 80 LYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIE-LWQKVMDLNSPRI 149 (177)
T ss_dssp HHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHTCCTTS
T ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHH-HHHHHHhhCCCCc
Confidence 99999999 8899999 999999999999999999999999999877777765544 4788877766543
No 72
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.48 E-value=6.4e-13 Score=115.49 Aligned_cols=153 Identities=14% Similarity=0.104 Sum_probs=119.2
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhh--------chhHHHHH---------HHhhhhhhhhHHHHH
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQL--------FGKYRDMA---------LAVKNPCHLNMAACL 144 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~--------~~~~~~~~---------~~l~~~~~~n~a~~~ 144 (266)
.+..+...|..+...|++++|+..|.+++...|.....-. .+...+.. ..-...++.++|.++
T Consensus 168 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 247 (388)
T 1w3b_A 168 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVY 247 (388)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHH
Confidence 3567778888888888888888888888888887543200 01100100 011234688999999
Q ss_pred HHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 024531 145 LKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKE 224 (266)
Q Consensus 145 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~ 224 (266)
...|++++|+..+++++.++|+++.+++.+|.++...|++++|+..|+++++++|++..+...+..+....++..++ ..
T Consensus 248 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A-~~ 326 (388)
T 1w3b_A 248 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEA-VR 326 (388)
T ss_dssp HHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHH-HH
T ss_pred HHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHH-HH
Confidence 99999999999999999999999999999999999999999999999999999999999999999887766666554 45
Q ss_pred HHhcccCCCCC
Q 024531 225 IYKGIFGPRPE 235 (266)
Q Consensus 225 ~~~k~~~~~~~ 235 (266)
.|.+++...+.
T Consensus 327 ~~~~al~~~p~ 337 (388)
T 1w3b_A 327 LYRKALEVFPE 337 (388)
T ss_dssp HHHHHTTSCTT
T ss_pred HHHHHHhcCCC
Confidence 57888776544
No 73
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.48 E-value=5.5e-13 Score=106.09 Aligned_cols=103 Identities=15% Similarity=0.068 Sum_probs=96.2
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
...+...|..++..|+|++|+..|.+++...|.... ++.++|.++..+|++++|+.++++++.
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~-----------------~~~~lg~~~~~~~~~~~A~~~~~~al~ 99 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAV-----------------AYFQRGMLYYQTEKYDLAIKDLKEALI 99 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchH-----------------HHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 457889999999999999999999999999998655 699999999999999999999999999
Q ss_pred CCCCch----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q 024531 163 EDENNV----------------KALFRRGKARAELGQTDAAREDFLKAGKFAPEDK 202 (266)
Q Consensus 163 l~p~~~----------------~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 202 (266)
+.|.+. .+++++|.++..+|++++|+..|++++.++|++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 155 (213)
T 1hh8_A 100 QLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 155 (213)
T ss_dssp TTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred hCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccc
Confidence 888766 9999999999999999999999999999999864
No 74
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.48 E-value=1.9e-12 Score=105.47 Aligned_cols=99 Identities=19% Similarity=0.149 Sum_probs=84.0
Q ss_pred hhhhhHHHHHHHhhCHHHHHHHHHhHhc--CCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 024531 135 PCHLNMAACLLKLKRYEEAIGQCSLVLG--EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLA 212 (266)
Q Consensus 135 ~~~~n~a~~~~~~~~~~~A~~~~~~al~--l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~ 212 (266)
.++.++|.++...|++++|+..+++++. .+|.+..+++.+|.++..+|++++|+..|++++.++|++..+...+..+.
T Consensus 106 ~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 185 (252)
T 2ho1_A 106 RVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLL 185 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHH
Confidence 3688899999999999999999999999 88888999999999999999999999999999999999999988888887
Q ss_pred HHHHHHHHHHHHHHhcccCCCC
Q 024531 213 EHEKAVYKKQKEIYKGIFGPRP 234 (266)
Q Consensus 213 ~~~~~~~~~~~~~~~k~~~~~~ 234 (266)
...++..++. ..+.+++...+
T Consensus 186 ~~~g~~~~A~-~~~~~~~~~~~ 206 (252)
T 2ho1_A 186 YKEREYVPAR-QYYDLFAQGGG 206 (252)
T ss_dssp HHTTCHHHHH-HHHHHHHTTSC
T ss_pred HHcCCHHHHH-HHHHHHHHhCc
Confidence 7776665554 44677766544
No 75
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.48 E-value=1.6e-13 Score=118.31 Aligned_cols=106 Identities=20% Similarity=0.070 Sum_probs=93.0
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
+..+...|..++..|++++|+..|.+++...|.+.. ++.++|.++...|++++|+..+++++.
T Consensus 65 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------~~~~lg~~~~~~g~~~~A~~~~~~al~ 127 (365)
T 4eqf_A 65 WPGAFEEGLKRLKEGDLPVTILFMEAAILQDPGDAE-----------------AWQFLGITQAENENEQAAIVALQRCLE 127 (365)
T ss_dssp CTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCCHH-----------------HHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 345778899999999999999999999999998655 588999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHH
Q 024531 163 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIA 205 (266)
Q Consensus 163 l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~ 205 (266)
++|++..+++.+|.++..+|++++|+..|++++.++|++..+.
T Consensus 128 ~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 170 (365)
T 4eqf_A 128 LQPNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLV 170 (365)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-
T ss_pred cCCCCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHH
Confidence 9999999999999999999999999999999888887654433
No 76
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.48 E-value=4.4e-13 Score=108.31 Aligned_cols=135 Identities=19% Similarity=0.164 Sum_probs=119.4
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
...+...|..++..|++++|+..|.+++...|.... ++.++|.++...|++++|+..+++++.
T Consensus 91 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~-----------------~~~~~a~~~~~~~~~~~A~~~~~~~~~ 153 (243)
T 2q7f_A 91 ATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGD-----------------LFYMLGTVLVKLEQPKLALPYLQRAVE 153 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHH-----------------HHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 455677899999999999999999999999988654 588999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 024531 163 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPE 235 (266)
Q Consensus 163 l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~ 235 (266)
.+|.+..+++.+|.++...|++++|+..|++++..+|++..+...++.+....++..++. ..|++++...+.
T Consensus 154 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~-~~~~~~~~~~p~ 225 (243)
T 2q7f_A 154 LNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREKAL-EMLDKAIDIQPD 225 (243)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHHH-HHHHHHHHHCTT
T ss_pred hCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHHHHH-HHHHHHHccCcc
Confidence 999999999999999999999999999999999999999999999999887776665544 447777765444
No 77
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.48 E-value=2.5e-13 Score=117.02 Aligned_cols=129 Identities=15% Similarity=0.086 Sum_probs=110.5
Q ss_pred HhHHHHhhccHHHHHHHHHHHHhhhcc--chhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCC
Q 024531 89 DGNALFKEEKLEEAMQQYEMAIAYMGD--DFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDEN 166 (266)
Q Consensus 89 ~g~~~~~~g~~~~A~~~y~~al~~~~~--~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~ 166 (266)
.|..+...|++++|+..|.+++...|. +.. ++.++|.++...|++++|+..+++++.++|+
T Consensus 183 l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~-----------------~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 245 (365)
T 4eqf_A 183 MSKSPVDSSVLEGVKELYLEAAHQNGDMIDPD-----------------LQTGLGVLFHLSGEFNRAIDAFNAALTVRPE 245 (365)
T ss_dssp ------CCHHHHHHHHHHHHHHHHSCSSCCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHhCcCccCHH-----------------HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC
Confidence 478889999999999999999999998 444 5899999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 024531 167 NVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPE 235 (266)
Q Consensus 167 ~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~ 235 (266)
++.+++.+|.++..+|++++|+..|+++++++|++..+...++.+...+++..++.. .|++++...+.
T Consensus 246 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~-~~~~al~~~~~ 313 (365)
T 4eqf_A 246 DYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAVS-NFLTALSLQRK 313 (365)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHH-HHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHH-HHHHHHHhCcc
Confidence 999999999999999999999999999999999999999999999887777665544 46777655443
No 78
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.47 E-value=6.9e-13 Score=111.79 Aligned_cols=152 Identities=13% Similarity=0.046 Sum_probs=112.8
Q ss_pred HHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhh--------hchhHHHH---HHH------hhhhhhhhHHHHHHH
Q 024531 84 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQ--------LFGKYRDM---ALA------VKNPCHLNMAACLLK 146 (266)
Q Consensus 84 ~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~--------~~~~~~~~---~~~------l~~~~~~n~a~~~~~ 146 (266)
..+...|..++..|++++|+..|.+++...|...... ..+...+- ... -...++.++|.++..
T Consensus 126 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 205 (330)
T 3hym_B 126 PAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQ 205 (330)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 4455666666666666666666666666666532210 01111110 000 113468899999999
Q ss_pred hhCHHHHHHHHHhHhcCC---------CCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q 024531 147 LKRYEEAIGQCSLVLGED---------ENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKA 217 (266)
Q Consensus 147 ~~~~~~A~~~~~~al~l~---------p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~ 217 (266)
.|++++|+..+++++.+. |.++.+++.+|.++..+|++++|+..|++++.++|++..+...++.+....++
T Consensus 206 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~ 285 (330)
T 3hym_B 206 NGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGN 285 (330)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTC
T ss_pred cccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhcc
Confidence 999999999999999886 67788999999999999999999999999999999999999999999888777
Q ss_pred HHHHHHHHHhcccCCCCCC
Q 024531 218 VYKKQKEIYKGIFGPRPEP 236 (266)
Q Consensus 218 ~~~~~~~~~~k~~~~~~~~ 236 (266)
..++. ..|.+++...+..
T Consensus 286 ~~~A~-~~~~~al~~~p~~ 303 (330)
T 3hym_B 286 FENAV-DYFHTALGLRRDD 303 (330)
T ss_dssp HHHHH-HHHHTTTTTCSCC
T ss_pred HHHHH-HHHHHHHccCCCc
Confidence 76554 4578888766543
No 79
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.47 E-value=4e-13 Score=110.67 Aligned_cols=128 Identities=15% Similarity=0.078 Sum_probs=96.7
Q ss_pred HhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCch
Q 024531 89 DGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNV 168 (266)
Q Consensus 89 ~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~ 168 (266)
.|..+...|++++|+..|.+++...|... .++.++|.+|...|++++|+..+++++.++|.++
T Consensus 80 lg~~~~~~~~~~~A~~~~~~a~~~~~~~~-----------------~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~ 142 (272)
T 3u4t_A 80 YGKILMKKGQDSLAIQQYQAAVDRDTTRL-----------------DMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDP 142 (272)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCT-----------------HHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCH
T ss_pred HHHHHHHcccHHHHHHHHHHHHhcCcccH-----------------HHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcH
Confidence 34445555555555555555555555433 3799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHH--HHHHHHHHhcccCCC
Q 024531 169 KALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAV--YKKQKEIYKGIFGPR 233 (266)
Q Consensus 169 ~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~--~~~~~~~~~k~~~~~ 233 (266)
.+++.+|...+..+++++|+..|+++++++|++..+...++.+....+.. .+.....|.+++...
T Consensus 143 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~ 209 (272)
T 3u4t_A 143 KVFYELGQAYYYNKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQDPDTKQGLAKPYYEKLIEVC 209 (272)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHSTTCSSCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHH
Confidence 99999994455566999999999999999999999988888876655431 122344567766543
No 80
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.47 E-value=1.4e-12 Score=105.54 Aligned_cols=138 Identities=11% Similarity=-0.043 Sum_probs=113.6
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHH----------------
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK---------------- 146 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~---------------- 146 (266)
...+..+|..++..|+|++|+..|+++++..|++.. ...+++++|.++..
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~--------------~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~ 106 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPN--------------IDYVMYMRGLTNMALDDSALQGFFGVDRSD 106 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTT--------------HHHHHHHHHHHHHHHHC-------------
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCc--------------HHHHHHHHHHHHHhhhhhhhhhhhccchhh
Confidence 456788999999999999999999999999998653 11257788888776
Q ss_pred --hhCHHHHHHHHHhHhcCCCCchHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH---HH
Q 024531 147 --LKRYEEAIGQCSLVLGEDENNVKAL-----------------FRRGKARAELGQTDAAREDFLKAGKFAPEDK---SI 204 (266)
Q Consensus 147 --~~~~~~A~~~~~~al~l~p~~~~a~-----------------~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~---~~ 204 (266)
.|++++|+..++++++.+|++..+. +.+|.+|...|+|++|+..|+++++..|+++ .+
T Consensus 107 ~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 186 (225)
T 2yhc_A 107 RDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDA 186 (225)
T ss_dssp -CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHH
Confidence 5789999999999999999987654 6789999999999999999999999999986 66
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 024531 205 ARELRLLAEHEKAVYKKQKEIYKGIFGPRPE 235 (266)
Q Consensus 205 ~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~ 235 (266)
+..++.+...+++..++.. .++++....+.
T Consensus 187 ~~~l~~~~~~~g~~~~A~~-~~~~l~~~~~~ 216 (225)
T 2yhc_A 187 LPLMENAYRQMQMNAQAEK-VAKIIAANSSN 216 (225)
T ss_dssp HHHHHHHHHHTTCHHHHHH-HHHHHHHCCSC
T ss_pred HHHHHHHHHHcCCcHHHHH-HHHHHHhhCCC
Confidence 7778888777777766544 46666554443
No 81
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.47 E-value=5.6e-13 Score=113.41 Aligned_cols=110 Identities=23% Similarity=0.337 Sum_probs=103.8
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
++.+...|..++..|+|++|+..|.+++...|.... ++.++|.++...|++++|+..+++++.
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~-----------------~~~~~a~~~~~~~~~~~A~~~~~~~~~ 65 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYI-----------------AYYRRATVFLAMGKSKAALPDLTKVIA 65 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHH-----------------HHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 567889999999999999999999999999998655 699999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC---CCHHHHHHHH
Q 024531 163 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAP---EDKSIARELR 209 (266)
Q Consensus 163 l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p---~~~~~~~~l~ 209 (266)
++|++..+++.+|.++..+|++++|+..|++++.++| ++..+...+.
T Consensus 66 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~ 115 (359)
T 3ieg_A 66 LKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLV 115 (359)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred hCCCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHH
Confidence 9999999999999999999999999999999999999 8888887774
No 82
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.46 E-value=1.3e-12 Score=103.89 Aligned_cols=151 Identities=12% Similarity=0.009 Sum_probs=102.0
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhh--------hchhHHHH---HH------HhhhhhhhhHHHHHH
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQ--------LFGKYRDM---AL------AVKNPCHLNMAACLL 145 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~--------~~~~~~~~---~~------~l~~~~~~n~a~~~~ 145 (266)
+..+...|..++..|++++|+..|.+++...|.....- ..+...+- .. .-...++.++|.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~ 87 (225)
T 2vq2_A 8 SNIKTQLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLC 87 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 44455556666666666666666666666555432210 00110000 00 001236788889999
Q ss_pred Hh-hCHHHHHHHHHhHhc--CCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 024531 146 KL-KRYEEAIGQCSLVLG--EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQ 222 (266)
Q Consensus 146 ~~-~~~~~A~~~~~~al~--l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~ 222 (266)
.. |++++|+..+++++. .+|.+..+++.+|.++..+|++++|+..|++++..+|++..+...++.+....++..++.
T Consensus 88 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~ 167 (225)
T 2vq2_A 88 GRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDAD 167 (225)
T ss_dssp TTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred HhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHH
Confidence 99 999999999999988 667778888899999999999999999999999999988888888888877766665544
Q ss_pred HHHHhcccCCCC
Q 024531 223 KEIYKGIFGPRP 234 (266)
Q Consensus 223 ~~~~~k~~~~~~ 234 (266)
. .+.+++...+
T Consensus 168 ~-~~~~~~~~~~ 178 (225)
T 2vq2_A 168 Y-YFKKYQSRVE 178 (225)
T ss_dssp H-HHHHHHHHHC
T ss_pred H-HHHHHHHhCC
Confidence 4 4666665443
No 83
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.46 E-value=7e-13 Score=111.49 Aligned_cols=143 Identities=13% Similarity=0.078 Sum_probs=114.6
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
....+...|..+...|++++|+..|++++..+|++.. ++.++|.++...|++++|+..+++++
T Consensus 116 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~-----------------a~~~la~~~~~~g~~~~A~~~l~~~~ 178 (287)
T 3qou_A 116 EEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGE-----------------IGLLLAETLIALNRSEDAEAVLXTIP 178 (287)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHH-----------------HHHHHHHHHHHTTCHHHHHHHHTTSC
T ss_pred chhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchh-----------------HHHHHHHHHHHCCCHHHHHHHHHhCc
Confidence 4566789999999999999999999999999999765 68999999999999999999999988
Q ss_pred cCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcccch
Q 024531 162 GEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPKQKKN 241 (266)
Q Consensus 162 ~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 241 (266)
..+|+....+...+..+...++.++|+..|++++.++|++..++..++.+....++..++... |.+++...+......+
T Consensus 179 ~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~-l~~~l~~~p~~~~~~a 257 (287)
T 3qou_A 179 LQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALEL-LFGHLRXDLTAADGQT 257 (287)
T ss_dssp GGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH-HHHHHHHCTTGGGGHH
T ss_pred hhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHH-HHHHHhcccccccchH
Confidence 888877777777777777888888888888888888888888888888777666666555544 5666665555433333
Q ss_pred h
Q 024531 242 W 242 (266)
Q Consensus 242 ~ 242 (266)
|
T Consensus 258 ~ 258 (287)
T 3qou_A 258 R 258 (287)
T ss_dssp H
T ss_pred H
Confidence 3
No 84
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.46 E-value=6.9e-13 Score=103.08 Aligned_cols=140 Identities=12% Similarity=0.037 Sum_probs=113.4
Q ss_pred HHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcC
Q 024531 84 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE 163 (266)
Q Consensus 84 ~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l 163 (266)
+.+...|..++..|++++|+..|.+++..+|++.. ++.++|.++...|++++|+..+++++..
T Consensus 7 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~-----------------a~~~la~~~~~~g~~~~A~~~~~~a~~~ 69 (176)
T 2r5s_A 7 EQLLKQVSELLQQGEHAQALNVIQTLSDELQSRGD-----------------VKLAKADCLLETKQFELAQELLATIPLE 69 (176)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHH-----------------HHHHHHHHHHHTTCHHHHHHHHTTCCGG
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHH-----------------HHHHHHHHHHHCCCHHHHHHHHHHhhhc
Confidence 45678899999999999999999999999999766 6999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcccchh
Q 024531 164 DENNVKALFRRGKARA-ELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPKQKKNW 242 (266)
Q Consensus 164 ~p~~~~a~~~~g~~~~-~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 242 (266)
+| ++..+..++.+.. ..+...+|+..|+++++++|+++.++..++.+....++..++... |.+++...|......+|
T Consensus 70 ~p-~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~-~~~~l~~~p~~~~~~a~ 147 (176)
T 2r5s_A 70 YQ-DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALEL-LWNILKVNLGAQDGEVK 147 (176)
T ss_dssp GC-CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHH-HHHHHTTCTTTTTTHHH
T ss_pred cC-ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHH-HHHHHHhCcccChHHHH
Confidence 99 7776666664432 333445689999999999999999999999988777777655544 78888777665444444
No 85
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.46 E-value=6.1e-13 Score=114.25 Aligned_cols=109 Identities=14% Similarity=0.086 Sum_probs=63.5
Q ss_pred hhccHHHHHHHHHHHHhhhcc--chhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHH
Q 024531 95 KEEKLEEAMQQYEMAIAYMGD--DFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALF 172 (266)
Q Consensus 95 ~~g~~~~A~~~y~~al~~~~~--~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 172 (266)
..|++++|+..|.+++...|. ... ++.++|.++...|++++|+..+++++.++|+++.+++
T Consensus 193 ~~~~~~~A~~~~~~a~~~~p~~~~~~-----------------~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 255 (368)
T 1fch_A 193 SDSLFLEVKELFLAAVRLDPTSIDPD-----------------VQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWN 255 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSCCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred hcccHHHHHHHHHHHHHhCcCcccHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHH
Confidence 555666666666666666555 222 3555666666666666666666666666666666666
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHH
Q 024531 173 RRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYK 220 (266)
Q Consensus 173 ~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~ 220 (266)
.+|.++..+|++++|+..|++++.++|++..+...++.+....++..+
T Consensus 256 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~ 303 (368)
T 1fch_A 256 KLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHRE 303 (368)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHH
Confidence 666666666666666666666666666666555555555554444433
No 86
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.45 E-value=8.3e-13 Score=107.58 Aligned_cols=135 Identities=17% Similarity=0.140 Sum_probs=119.7
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
.+..+...|..++..|++++|+..|.+++...|.... ++.++|.++...|++++|+..+.+++
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~-----------------~~~~la~~~~~~~~~~~A~~~~~~a~ 98 (252)
T 2ho1_A 36 ARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSAD-----------------AHAALAVVFQTEMEPKLADEEYRKAL 98 (252)
T ss_dssp HHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3788899999999999999999999999999988654 68999999999999999999999999
Q ss_pred cCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 024531 162 GEDENNVKALFRRGKARAELGQTDAAREDFLKAGK--FAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRP 234 (266)
Q Consensus 162 ~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~--l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~ 234 (266)
..+|.+..+++.+|.++..+|++++|+..|++++. .+|.+..+...++.+....++..++.. .+.+++...+
T Consensus 99 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~-~~~~~~~~~~ 172 (252)
T 2ho1_A 99 ASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKE-YFEKSLRLNR 172 (252)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCS
T ss_pred HHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHH-HHHHHHhcCc
Confidence 99999999999999999999999999999999999 889999999999988777666655444 4667665443
No 87
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.45 E-value=1.2e-12 Score=110.28 Aligned_cols=144 Identities=14% Similarity=0.018 Sum_probs=109.4
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHh-hCHHHHHHHHHhH
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKL-KRYEEAIGQCSLV 160 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~-~~~~~A~~~~~~a 160 (266)
.+..+.+.|..+...|++++|+..|.+++.+.+..... .....++.++|.+|... |++++|+.+|+++
T Consensus 76 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~-----------~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~A 144 (292)
T 1qqe_A 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQF-----------RRGANFKFELGEILENDLHDYAKAIDCYELA 144 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH-----------HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCH-----------HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 36677788888888888888888888888887653221 11234688999999996 9999999999999
Q ss_pred hcCCCCc------hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH-------HHHHHHHHHHHHHHHHHHHHHHHh
Q 024531 161 LGEDENN------VKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKS-------IARELRLLAEHEKAVYKKQKEIYK 227 (266)
Q Consensus 161 l~l~p~~------~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~-------~~~~l~~l~~~~~~~~~~~~~~~~ 227 (266)
+++.|.+ ..++.++|.++..+|+|++|+..|++++.+.|++.. +...+..+...+++..++. ..|.
T Consensus 145 l~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~-~~~~ 223 (292)
T 1qqe_A 145 GEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAA-RTLQ 223 (292)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHH-HHHH
T ss_pred HHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHH-HHHH
Confidence 9998754 467899999999999999999999999999998654 4456677766666655444 4578
Q ss_pred cccCCCCCCc
Q 024531 228 GIFGPRPEPK 237 (266)
Q Consensus 228 k~~~~~~~~~ 237 (266)
+.+...+...
T Consensus 224 ~al~l~p~~~ 233 (292)
T 1qqe_A 224 EGQSEDPNFA 233 (292)
T ss_dssp GGGCC-----
T ss_pred HHHhhCCCCC
Confidence 8887766544
No 88
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.44 E-value=4.5e-12 Score=100.81 Aligned_cols=150 Identities=12% Similarity=-0.040 Sum_probs=107.8
Q ss_pred HHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhh--------hhc-hhHHHH---HHH-h-------hhhhhhhHHHH
Q 024531 84 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMF--------QLF-GKYRDM---ALA-V-------KNPCHLNMAAC 143 (266)
Q Consensus 84 ~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~--------~~~-~~~~~~---~~~-l-------~~~~~~n~a~~ 143 (266)
..+...|..++..|++++|+..|.+++...|..... ... +...+- ... + ...++.++|.+
T Consensus 43 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~ 122 (225)
T 2vq2_A 43 LAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGIC 122 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHH
Confidence 345556666666666666666666666666553221 011 221111 111 1 13468899999
Q ss_pred HHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC-CCHHHHHHHHHHHHHHHHHHHHH
Q 024531 144 LLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAP-EDKSIARELRLLAEHEKAVYKKQ 222 (266)
Q Consensus 144 ~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p-~~~~~~~~l~~l~~~~~~~~~~~ 222 (266)
+...|++++|+..+.+++..+|.++.+++.+|.++..+|++++|+..|++++.++| ++..+...+..+....+... +.
T Consensus 123 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~a 201 (225)
T 2vq2_A 123 SAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQ-AA 201 (225)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHH-HH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCcHH-HH
Confidence 99999999999999999999999999999999999999999999999999999999 99999877777755555443 44
Q ss_pred HHHHhcccCCCC
Q 024531 223 KEIYKGIFGPRP 234 (266)
Q Consensus 223 ~~~~~k~~~~~~ 234 (266)
...++.+....+
T Consensus 202 ~~~~~~~~~~~p 213 (225)
T 2vq2_A 202 YEYEAQLQANFP 213 (225)
T ss_dssp HHHHHHHHHHCT
T ss_pred HHHHHHHHHhCC
Confidence 455555543333
No 89
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.44 E-value=1.8e-12 Score=94.75 Aligned_cols=99 Identities=17% Similarity=0.154 Sum_probs=87.8
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHE 215 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~ 215 (266)
.++++|.+++..|++++|+..+++++.++|+++.+++.+|.++..+|++++|+..|+++++++|++..++..++.+....
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 47789999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHhcccCCCCC
Q 024531 216 KAVYKKQKEIYKGIFGPRPE 235 (266)
Q Consensus 216 ~~~~~~~~~~~~k~~~~~~~ 235 (266)
++..++.. .|.+++...|.
T Consensus 99 g~~~~A~~-~~~~al~~~P~ 117 (121)
T 1hxi_A 99 HNANAALA-SLRAWLLSQPQ 117 (121)
T ss_dssp HHHHHHHH-HHHHHHC----
T ss_pred CCHHHHHH-HHHHHHHhCcC
Confidence 88766654 47777766554
No 90
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.43 E-value=7e-14 Score=99.50 Aligned_cols=95 Identities=25% Similarity=0.329 Sum_probs=76.4
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
.+..+...|..++..|+|++|+..|.+++...|.+.. ++.++|.++..+|++++|+.+|++++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~-----------------~~~~lg~~~~~~g~~~~A~~~~~~al 65 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPV-----------------GYSNKAMALIKLGEYTQAIQMCQQGL 65 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHH-----------------HHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 3566778888888888888888888888888887654 57888888888888888888888888
Q ss_pred cCCCCc------hHHHHHHHHHHHHcCCHHHHHHHHHH
Q 024531 162 GEDENN------VKALFRRGKARAELGQTDAAREDFLK 193 (266)
Q Consensus 162 ~l~p~~------~~a~~~~g~~~~~~g~~~~A~~~~~~ 193 (266)
.++|++ ..+++++|.++..+|+++.|+..+++
T Consensus 66 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 66 RYTSTAEHVAIRSKLQYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp TSCSSTTSHHHHHHHHHHHHHHHHHHHCCCCCSSSSSS
T ss_pred HhCCCccHHHHHHHHHHHHHHHHHHHHhHhhhHhHHHH
Confidence 888887 78888888888888887777766543
No 91
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.43 E-value=2.5e-13 Score=100.20 Aligned_cols=99 Identities=10% Similarity=0.046 Sum_probs=83.0
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH-------HHHHHH
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK-------SIAREL 208 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~-------~~~~~l 208 (266)
++.++|.++++.|+|++|+.+|++|++++|+++.+++++|.+|..+|+|++|+.+|+++++++|++. .+...+
T Consensus 10 a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~l 89 (127)
T 4gcn_A 10 AEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRA 89 (127)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHH
Confidence 6889999999999999999999999999999999999999999999999999999999999999764 355556
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCC
Q 024531 209 RLLAEHEKAVYKKQKEIYKGIFGPRPE 235 (266)
Q Consensus 209 ~~l~~~~~~~~~~~~~~~~k~~~~~~~ 235 (266)
+.+...++...++. ..|.+.+...++
T Consensus 90 g~~~~~~~~~~~A~-~~~~kal~~~~~ 115 (127)
T 4gcn_A 90 GNAFQKQNDLSLAV-QWFHRSLSEFRD 115 (127)
T ss_dssp HHHHHHTTCHHHHH-HHHHHHHHHSCC
T ss_pred HHHHHHcCCHHHHH-HHHHHHHhhCcC
Confidence 66666666665444 447777654443
No 92
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.43 E-value=2.9e-12 Score=107.90 Aligned_cols=130 Identities=13% Similarity=0.005 Sum_probs=101.3
Q ss_pred HHHHHHhHHHHhhc-cHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 84 DRRKMDGNALFKEE-KLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 84 ~~~~~~g~~~~~~g-~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
..+...|..++..| ++++|+..|.+++...|.... ++.++|.++...|++++|+..+++++.
T Consensus 91 ~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~-----------------~~~~l~~~~~~~~~~~~A~~~~~~a~~ 153 (330)
T 3hym_B 91 VSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGP-----------------AWIAYGHSFAVESEHDQAMAAYFTAAQ 153 (330)
T ss_dssp HHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHH-----------------HHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 34455666666666 666666666666666665433 588899999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 024531 163 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFG 231 (266)
Q Consensus 163 l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~ 231 (266)
++|++..+++.+|.++..+|++++|+..|++++.++|++..+...++.+....++..++... +.+++.
T Consensus 154 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~-~~~a~~ 221 (330)
T 3hym_B 154 LMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKW-FLDALE 221 (330)
T ss_dssp HTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHH-HHHHHH
T ss_pred hccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHH-HHHHHH
Confidence 99998889999999999999999999999999999999988888888887776666554443 555544
No 93
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.42 E-value=2.8e-12 Score=115.65 Aligned_cols=115 Identities=23% Similarity=0.298 Sum_probs=101.0
Q ss_pred CCCCCHHHHHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCH
Q 024531 71 RSDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRY 150 (266)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~ 150 (266)
...++..+....+..+...|..++..|+|++|+..|++++..+|.+.. ++.++|.|+..+|++
T Consensus 13 ~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------~~~~la~~~~~~g~~ 75 (537)
T 3fp2_A 13 LKGLSPSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPV-----------------FYSNISACYISTGDL 75 (537)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHHTCH
T ss_pred hcCCCcchhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCCcH-----------------HHHHHHHHHHHcCCH
Confidence 455678888889999999999999999999999999999999998765 699999999999999
Q ss_pred HHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH
Q 024531 151 EEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKS 203 (266)
Q Consensus 151 ~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~ 203 (266)
++|+..|++++.++|+++.+++.+|.++..+|++++|+..|+ ++.++|+...
T Consensus 76 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~-~~~~~~~~~~ 127 (537)
T 3fp2_A 76 EKVIEFTTKALEIKPDHSKALLRRASANESLGNFTDAMFDLS-VLSLNGDFDG 127 (537)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHH-HHC-------
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHcCCHHHHHHHHH-HHhcCCCCCh
Confidence 999999999999999999999999999999999999999996 8888887543
No 94
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.42 E-value=2.3e-12 Score=113.77 Aligned_cols=115 Identities=20% Similarity=0.301 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHH
Q 024531 79 RIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCS 158 (266)
Q Consensus 79 ~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~ 158 (266)
.+..+..+...|..++..|+|++|+..|.+++...|.+.. ++.++|.++...|++++|+..++
T Consensus 22 ~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~-----------------~~~~l~~~~~~~g~~~~A~~~~~ 84 (450)
T 2y4t_A 22 SMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYI-----------------AYYRRATVFLAMGKSKAALPDLT 84 (450)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHH-----------------HHHHHHHHHHHCCCHHHHHHHHH
Confidence 3456888999999999999999999999999999988655 69999999999999999999999
Q ss_pred hHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH---HHHHHHHH
Q 024531 159 LVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK---SIARELRL 210 (266)
Q Consensus 159 ~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~---~~~~~l~~ 210 (266)
++++++|++..+++.+|.+|..+|++++|+..|++++.++|++. .+...+..
T Consensus 85 ~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~ 139 (450)
T 2y4t_A 85 KVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIK 139 (450)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHH
T ss_pred HHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988 77666543
No 95
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.42 E-value=2.5e-12 Score=92.62 Aligned_cols=97 Identities=16% Similarity=0.234 Sum_probs=85.5
Q ss_pred HHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHH
Q 024531 101 EAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAE 180 (266)
Q Consensus 101 ~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 180 (266)
.|+..|.+++...|.+.. +++++|.++...|++++|+..|++++.++|++..+++.+|.++..
T Consensus 3 ~a~~~~~~al~~~p~~~~-----------------~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~ 65 (115)
T 2kat_A 3 AITERLEAMLAQGTDNML-----------------LRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQG 65 (115)
T ss_dssp CHHHHHHHHHTTTCCCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHH-----------------HHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH
Confidence 578999999999998765 699999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHhhCCC--CHHHHHHHHHHHHH
Q 024531 181 LGQTDAAREDFLKAGKFAPE--DKSIARELRLLAEH 214 (266)
Q Consensus 181 ~g~~~~A~~~~~~al~l~p~--~~~~~~~l~~l~~~ 214 (266)
+|++++|+..|++++.++|+ +......+......
T Consensus 66 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~l~~ 101 (115)
T 2kat_A 66 QGDRAGARQAWESGLAAAQSRGDQQVVKELQVFLRR 101 (115)
T ss_dssp HTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhccccccHHHHHHHHHHHHH
Confidence 99999999999999999985 45555555444333
No 96
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.42 E-value=1.7e-12 Score=111.43 Aligned_cols=107 Identities=14% Similarity=0.067 Sum_probs=97.7
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
+..+...|..++..|++++|+..|.+++...|.... ++.++|.++...|++++|+..+++++.
T Consensus 64 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------~~~~l~~~~~~~g~~~~A~~~~~~al~ 126 (368)
T 1fch_A 64 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHME-----------------AWQYLGTTQAENEQELLAISALRRCLE 126 (368)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHCcCHHHHHHHHHHHHh
Confidence 345678999999999999999999999999998655 689999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHH
Q 024531 163 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIAR 206 (266)
Q Consensus 163 l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~ 206 (266)
++|+++.+++.+|.++..+|++++|+..|++++.++|++..+..
T Consensus 127 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 170 (368)
T 1fch_A 127 LKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVT 170 (368)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC
T ss_pred cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHH
Confidence 99999999999999999999999999999999999998765543
No 97
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.41 E-value=3.7e-12 Score=107.14 Aligned_cols=129 Identities=16% Similarity=0.130 Sum_probs=107.8
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
...+...|..++..|++++|+..|.+++...|.... ++.++|.++...|++++|+..+++++.
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~-----------------~~~~l~~~~~~~~~~~~A~~~~~~a~~ 234 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQ-----------------LWNKLGATLANGNRPQEALDAYNRALD 234 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 456677888999999999999999999998887654 588899999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC------------CHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 024531 163 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPE------------DKSIARELRLLAEHEKAVYKKQKEIYKGI 229 (266)
Q Consensus 163 l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~------------~~~~~~~l~~l~~~~~~~~~~~~~~~~k~ 229 (266)
.+|++..+++.+|.++..+|++++|+..|++++.++|+ +..+...+..+...+++..++.. .+++.
T Consensus 235 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~-~~~~~ 312 (327)
T 3cv0_A 235 INPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVEL-TYAQN 312 (327)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHHH-HTTCC
T ss_pred cCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHHHH-HHHHH
Confidence 99999999999999999999999999999999999998 78888888888777666554433 34443
No 98
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.40 E-value=1.1e-12 Score=95.97 Aligned_cols=97 Identities=11% Similarity=-0.045 Sum_probs=88.4
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHE 215 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~ 215 (266)
.+.++|.+++..|+|++|+..|++++.++|+++.+++++|.++..+|+|++|+.+|+++++++|++..+...++.+...+
T Consensus 6 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 85 (126)
T 3upv_A 6 EARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAV 85 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHH
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred HHHHHHHHHHHhcccCCC
Q 024531 216 KAVYKKQKEIYKGIFGPR 233 (266)
Q Consensus 216 ~~~~~~~~~~~~k~~~~~ 233 (266)
++..++... |.+.+...
T Consensus 86 ~~~~~A~~~-~~~al~~~ 102 (126)
T 3upv_A 86 KEYASALET-LDAARTKD 102 (126)
T ss_dssp TCHHHHHHH-HHHHHHHH
T ss_pred hCHHHHHHH-HHHHHHhC
Confidence 777655444 67776554
No 99
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.40 E-value=4.1e-12 Score=106.87 Aligned_cols=149 Identities=12% Similarity=0.029 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHH
Q 024531 77 EERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQ 156 (266)
Q Consensus 77 ~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~ 156 (266)
....+.+..+...|+.+...|+|++|+..|.+++.+.+.... ..-...++.++|.+|..+|++++|+.+
T Consensus 31 ~~~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~-----------~~~~a~~~~~lg~~~~~~g~~~~A~~~ 99 (292)
T 1qqe_A 31 YKFEEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGN-----------EDEAGNTYVEAYKCFKSGGNSVNAVDS 99 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCC-----------HHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 334555667777788999999999999999999998754211 011234799999999999999999999
Q ss_pred HHhHhcCCCCc------hHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHHHHHHHHHH
Q 024531 157 CSLVLGEDENN------VKALFRRGKARAEL-GQTDAAREDFLKAGKFAPED------KSIARELRLLAEHEKAVYKKQK 223 (266)
Q Consensus 157 ~~~al~l~p~~------~~a~~~~g~~~~~~-g~~~~A~~~~~~al~l~p~~------~~~~~~l~~l~~~~~~~~~~~~ 223 (266)
+++++.+.|.. ..++.++|.+|..+ |++++|+.+|++++.+.|++ ..+...++.+...+++..++.
T Consensus 100 ~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~- 178 (292)
T 1qqe_A 100 LENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEAS- 178 (292)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH-
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHH-
Confidence 99999987753 46899999999996 99999999999999998864 456777888877777776555
Q ss_pred HHHhcccCCCCCCc
Q 024531 224 EIYKGIFGPRPEPK 237 (266)
Q Consensus 224 ~~~~k~~~~~~~~~ 237 (266)
..|.++....+...
T Consensus 179 ~~~~~al~~~~~~~ 192 (292)
T 1qqe_A 179 DIYSKLIKSSMGNR 192 (292)
T ss_dssp HHHHHHHHTTSSCT
T ss_pred HHHHHHHHHHhcCC
Confidence 45788877665543
No 100
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.39 E-value=5.1e-12 Score=96.81 Aligned_cols=117 Identities=16% Similarity=0.044 Sum_probs=97.8
Q ss_pred hhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 024531 135 PCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEH 214 (266)
Q Consensus 135 ~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~ 214 (266)
..+.++|.+++..|+|++|+..|++++.++|+++.+++++|.+|..+|+|++|+.+|++++.++|++..++..++.+...
T Consensus 12 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 91 (164)
T 3sz7_A 12 DKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFD 91 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHhcccCCCCCCcccchhHHHhHHHHHHHH
Q 024531 215 EKAVYKKQKEIYKGIFGPRPEPKQKKNWLIIFWQLLVSLV 254 (266)
Q Consensus 215 ~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (266)
+++..++.. .|.+.+...+... .+|....+..+..-+
T Consensus 92 ~g~~~~A~~-~~~~al~~~p~~~--~~~~~~~l~~~~~~~ 128 (164)
T 3sz7_A 92 MADYKGAKE-AYEKGIEAEGNGG--SDAMKRGLETTKRKI 128 (164)
T ss_dssp TTCHHHHHH-HHHHHHHHHSSSC--CHHHHHHHHHHHHHH
T ss_pred ccCHHHHHH-HHHHHHHhCCCch--HHHHHHHHHHHHHHH
Confidence 877765555 4778776655443 345444444443333
No 101
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.38 E-value=5.6e-12 Score=112.77 Aligned_cols=108 Identities=21% Similarity=0.270 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHH
Q 024531 79 RIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCS 158 (266)
Q Consensus 79 ~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~ 158 (266)
+.+.+..+...|+.++..|+|++|+..|++++...|+ .. ++.++|.++..+|++++|+..++
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~-----------------~~~~la~~~~~~g~~~~A~~~~~ 63 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKED-PV-----------------FYSNLSACYVSVGDLKKVVEMST 63 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC-HH-----------------HHHHHHHHHHHHTCHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc-HH-----------------HHHhHHHHHHHHhhHHHHHHHHH
Confidence 3567889999999999999999999999999999985 33 59999999999999999999999
Q ss_pred hHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHH
Q 024531 159 LVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSI 204 (266)
Q Consensus 159 ~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 204 (266)
++++++|++..+++.+|.++..+|++++|+..|++++.++|.+...
T Consensus 64 ~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~ 109 (514)
T 2gw1_A 64 KALELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDAS 109 (514)
T ss_dssp HHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSCCGGG
T ss_pred HHhccChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCccch
Confidence 9999999999999999999999999999999999999999965433
No 102
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.38 E-value=3.5e-12 Score=104.86 Aligned_cols=132 Identities=14% Similarity=-0.021 Sum_probs=111.1
Q ss_pred HHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHH
Q 024531 92 ALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKAL 171 (266)
Q Consensus 92 ~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 171 (266)
.....|+|++|+..|.+++...+..... ...++.++|.++...|++++|+..+++++.++|+++.++
T Consensus 14 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 80 (275)
T 1xnf_A 14 PLQPTLQQEVILARMEQILASRALTDDE-------------RAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVF 80 (275)
T ss_dssp CCCCCHHHHHHHHHHHHHHTSSCCCHHH-------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHH
T ss_pred ccCccchHHHHHHHHHHHHhcccccCch-------------hHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHH
Confidence 3445689999999999999975422110 233799999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCc
Q 024531 172 FRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPK 237 (266)
Q Consensus 172 ~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~~~ 237 (266)
+.+|.++..+|++++|+..|++++.++|++..+...++.+....++..++. ..|.+++...+...
T Consensus 81 ~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~-~~~~~a~~~~~~~~ 145 (275)
T 1xnf_A 81 NYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQ-DDLLAFYQDDPNDP 145 (275)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHH-HHHHHHHHHCTTCH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHH-HHHHHHHHhCCCCh
Confidence 999999999999999999999999999999999999999987777765554 44777776655543
No 103
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.36 E-value=1.2e-11 Score=89.77 Aligned_cols=102 Identities=26% Similarity=0.330 Sum_probs=94.2
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
...+...|..++..|++++|+..|.+++...|.... ++.++|.++...|++++|+..+.+++.
T Consensus 35 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~-----------------~~~~l~~~~~~~~~~~~A~~~~~~~~~ 97 (136)
T 2fo7_A 35 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAE-----------------AWYNLGNAYYKQGDYDEAIEYYQKALE 97 (136)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchH-----------------HHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 345677899999999999999999999999887544 588999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 024531 163 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPED 201 (266)
Q Consensus 163 l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~ 201 (266)
..|.+..+++.+|.++...|++++|...|++++.++|++
T Consensus 98 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 98 LDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp HCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred hCCCChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999999999999999999864
No 104
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.36 E-value=8e-12 Score=102.61 Aligned_cols=137 Identities=18% Similarity=0.107 Sum_probs=114.4
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhh-----ccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHH
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYM-----GDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAI 154 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~ 154 (266)
+..+..+...|..++..|++++|+..|.+++... ++.+. ...++.++|.++...|++++|+
T Consensus 40 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~--------------~~~~~~~l~~~~~~~g~~~~A~ 105 (283)
T 3edt_B 40 PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPA--------------VAATLNNLAVLYGKRGKYKEAE 105 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHH--------------HHHHHHHHHHHHHTTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchH--------------HHHHHHHHHHHHHHhccHHHHH
Confidence 4457788899999999999999999999999986 22221 3447999999999999999999
Q ss_pred HHHHhHhcC--------CCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCCHHHHHHHHHHHHHHHHH
Q 024531 155 GQCSLVLGE--------DENNVKALFRRGKARAELGQTDAAREDFLKAGKF--------APEDKSIARELRLLAEHEKAV 218 (266)
Q Consensus 155 ~~~~~al~l--------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l--------~p~~~~~~~~l~~l~~~~~~~ 218 (266)
.++.+++.+ +|....+++.+|.++..+|++++|+..|++++.+ +|....+...++.+...+++.
T Consensus 106 ~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 185 (283)
T 3edt_B 106 PLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKY 185 (283)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCH
Confidence 999999988 5778899999999999999999999999999999 777778888888887777766
Q ss_pred HHHHHHHHhcccC
Q 024531 219 YKKQKEIYKGIFG 231 (266)
Q Consensus 219 ~~~~~~~~~k~~~ 231 (266)
.++... +.+++.
T Consensus 186 ~~A~~~-~~~~l~ 197 (283)
T 3edt_B 186 QDAETL-YKEILT 197 (283)
T ss_dssp HHHHHH-HHHHHH
T ss_pred HHHHHH-HHHHHH
Confidence 554443 455443
No 105
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.36 E-value=3.1e-12 Score=117.30 Aligned_cols=122 Identities=20% Similarity=0.125 Sum_probs=92.6
Q ss_pred hccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHH
Q 024531 96 EEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRG 175 (266)
Q Consensus 96 ~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 175 (266)
.|++++|+..|+++++..|.+.. ++.++|.++...|++++|+..++++++++|++..+++.+|
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~~-----------------~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 64 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDFV-----------------AWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLG 64 (568)
T ss_dssp -------------------CCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 47899999999999999998665 6999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 024531 176 KARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPE 235 (266)
Q Consensus 176 ~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~ 235 (266)
.++..+|++++|+..|+++++++|++..+...++.+....++..++.. .|.+.+...+.
T Consensus 65 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~-~~~~al~~~p~ 123 (568)
T 2vsy_A 65 RVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAA-AYTRAHQLLPE 123 (568)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCTT
T ss_pred HHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHH-HHHHHHHhCCC
Confidence 999999999999999999999999999999999999887777765544 47777765554
No 106
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.34 E-value=4.5e-12 Score=98.44 Aligned_cols=135 Identities=11% Similarity=0.071 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHH-HHHhhCHHHHH
Q 024531 76 VEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAAC-LLKLKRYEEAI 154 (266)
Q Consensus 76 ~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~-~~~~~~~~~A~ 154 (266)
....+.....+...|..+...|++++|+..|.+++...| +... +..++.+ +...+....|+
T Consensus 33 l~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~-----------------~~~~~~~~~~~~~~~~~a~ 94 (176)
T 2r5s_A 33 SDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSY-----------------KSLIAKLELHQQAAESPEL 94 (176)
T ss_dssp CHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHH-----------------HHHHHHHHHHHHHTSCHHH
T ss_pred HHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHH-----------------HHHHHHHHHHhhcccchHH
Confidence 344556678889999999999999999999999999998 5431 2233333 22334455689
Q ss_pred HHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 024531 155 GQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPED--KSIARELRLLAEHEKAVYKKQKEIYKGI 229 (266)
Q Consensus 155 ~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~--~~~~~~l~~l~~~~~~~~~~~~~~~~k~ 229 (266)
..+++++.++|+++.+++.+|.++..+|++++|+..|+++++++|+. ..++..+..+...+++..+.... |++.
T Consensus 95 ~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~-y~~a 170 (176)
T 2r5s_A 95 KRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASK-YRRQ 170 (176)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHH-HHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHH-HHHH
Confidence 99999999999999999999999999999999999999999999975 56888888887766655444333 4443
No 107
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.33 E-value=4.9e-12 Score=106.26 Aligned_cols=124 Identities=10% Similarity=-0.016 Sum_probs=109.1
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
...+..+|..+...|++++|+..|.+++...|+... ...+.+..+...++...|+..+++++.
T Consensus 151 ~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~-----------------~~~~~~~~l~~~~~~~~a~~~l~~al~ 213 (287)
T 3qou_A 151 GEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRY-----------------QGLVAQIELLXQAADTPEIQQLQQQVA 213 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHH-----------------HHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHH-----------------HHHHHHHHHHhhcccCccHHHHHHHHh
Confidence 456677899999999999999999999999996432 466778888899999999999999999
Q ss_pred CCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC--HHHHHHHHHHHHHHHHHHHHHH
Q 024531 163 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPED--KSIARELRLLAEHEKAVYKKQK 223 (266)
Q Consensus 163 l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~--~~~~~~l~~l~~~~~~~~~~~~ 223 (266)
.+|+++.+++.+|.++...|++++|+..|++++.++|++ ..++..+..+...+++..+...
T Consensus 214 ~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~ 276 (287)
T 3qou_A 214 ENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALAS 276 (287)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHHH
T ss_pred cCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHHH
Confidence 999999999999999999999999999999999999998 8899999988777665544433
No 108
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.32 E-value=7.1e-13 Score=114.06 Aligned_cols=124 Identities=14% Similarity=0.068 Sum_probs=105.3
Q ss_pred hccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCc--------
Q 024531 96 EEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENN-------- 167 (266)
Q Consensus 96 ~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~-------- 167 (266)
.+++.+|+..|.+++...|.... ++.++|.++++.|+|++|+..|++++.++|.+
T Consensus 126 L~~~~~A~~~~~~a~~~~p~~a~-----------------~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~ 188 (336)
T 1p5q_A 126 LKSFEKAKESWEMNSEEKLEQST-----------------IVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEA 188 (336)
T ss_dssp EEEEECCCCGGGCCHHHHHHHHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHH
T ss_pred EeecccccchhcCCHHHHHHHHH-----------------HHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHH
Confidence 45566677677776666665333 69999999999999999999999999999998
Q ss_pred -------hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCc
Q 024531 168 -------VKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPK 237 (266)
Q Consensus 168 -------~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~~~ 237 (266)
..+++++|.||..+|+|++|+.+|+++++++|++..++..++.+...+++..++.. .|.+++...+...
T Consensus 189 ~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~-~~~~al~l~P~~~ 264 (336)
T 1p5q_A 189 QKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARA-DFQKVLQLYPNNK 264 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHCCCCH
Confidence 69999999999999999999999999999999999999999999888877765544 4788887666544
No 109
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.32 E-value=2.7e-11 Score=102.07 Aligned_cols=96 Identities=18% Similarity=0.175 Sum_probs=89.0
Q ss_pred HhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHH
Q 024531 94 FKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFR 173 (266)
Q Consensus 94 ~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 173 (266)
...|++++|+..|+++++..|.+.. +++++|.++.++|++++|+..+++++.++|+++.++++
T Consensus 177 ~~~~~~~eA~~~~~~~l~~~p~~~~-----------------~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~ 239 (291)
T 3mkr_A 177 AGGEKLQDAYYIFQEMADKCSPTLL-----------------LLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLIN 239 (291)
T ss_dssp HCTTHHHHHHHHHHHHHHHSCCCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hCchHHHHHHHHHHHHHHhCCCcHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 3458999999999999999998665 69999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHH-HHHHHHHHHhhCCCCHHHHH
Q 024531 174 RGKARAELGQTDA-AREDFLKAGKFAPEDKSIAR 206 (266)
Q Consensus 174 ~g~~~~~~g~~~~-A~~~~~~al~l~p~~~~~~~ 206 (266)
+|.++..+|++++ +..+++++++++|+++.+..
T Consensus 240 l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~d 273 (291)
T 3mkr_A 240 LVVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKE 273 (291)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhCCCChHHHH
Confidence 9999999999986 56899999999999998875
No 110
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.32 E-value=1.3e-11 Score=111.32 Aligned_cols=154 Identities=12% Similarity=-0.017 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhh-h-------hchhHHH---HHH------HhhhhhhhhH
Q 024531 78 ERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMF-Q-------LFGKYRD---MAL------AVKNPCHLNM 140 (266)
Q Consensus 78 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~-~-------~~~~~~~---~~~------~l~~~~~~n~ 140 (266)
.....+..+...|..++..|++++|+..|.+++...|. ... . ..+...+ ... .-...++.++
T Consensus 238 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 316 (537)
T 3fp2_A 238 LRENAALALCYTGIFHFLKNNLLDAQVLLQESINLHPT-PNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHR 316 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHH
Confidence 34455777888999999999999999999999998887 221 0 0111111 111 1124578899
Q ss_pred HHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHH
Q 024531 141 AACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYK 220 (266)
Q Consensus 141 a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~ 220 (266)
|.++...|++++|+..+++++.++|++..+++.+|.++..+|++++|+..|++++.++|++..+...++.+....++..+
T Consensus 317 ~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 396 (537)
T 3fp2_A 317 GQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDT 396 (537)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988777766655
Q ss_pred HHHHHHhcccCCC
Q 024531 221 KQKEIYKGIFGPR 233 (266)
Q Consensus 221 ~~~~~~~k~~~~~ 233 (266)
+.. .|.+++...
T Consensus 397 A~~-~~~~a~~~~ 408 (537)
T 3fp2_A 397 AIK-QYDIAKRLE 408 (537)
T ss_dssp HHH-HHHHHHHHH
T ss_pred HHH-HHHHHHHcC
Confidence 444 466665443
No 111
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.31 E-value=2e-11 Score=86.49 Aligned_cols=80 Identities=15% Similarity=0.150 Sum_probs=72.3
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHH
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPED------KSIARELR 209 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~------~~~~~~l~ 209 (266)
++.++|.++...|++++|+..|++++.++|+++.+++++|.++..+|++++|+.+|++++.++|++ ..+...++
T Consensus 6 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~ 85 (111)
T 2l6j_A 6 KQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLE 85 (111)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHH
Confidence 688999999999999999999999999999999999999999999999999999999999999998 66665555
Q ss_pred HHHHHH
Q 024531 210 LLAEHE 215 (266)
Q Consensus 210 ~l~~~~ 215 (266)
.+...+
T Consensus 86 ~~~~~~ 91 (111)
T 2l6j_A 86 LAQGAV 91 (111)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554333
No 112
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.31 E-value=9.6e-12 Score=94.77 Aligned_cols=99 Identities=18% Similarity=0.108 Sum_probs=89.0
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhcCCCC-------chH-----HHHHHHHHHHHcCCHHHHHHHHHHHHhh------
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLGEDEN-------NVK-----ALFRRGKARAELGQTDAAREDFLKAGKF------ 197 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~-------~~~-----a~~~~g~~~~~~g~~~~A~~~~~~al~l------ 197 (266)
.+.++|.++++.|+|++|+..|++||+++|+ +.. +|+++|.++..+|+|++|+.+|.+++++
T Consensus 13 ~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e 92 (159)
T 2hr2_A 13 LALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGE 92 (159)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcccc
Confidence 5889999999999999999999999999999 444 9999999999999999999999999999
Q ss_pred -CCCCHHHH----HHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 024531 198 -APEDKSIA----RELRLLAEHEKAVYKKQKEIYKGIFGPRPE 235 (266)
Q Consensus 198 -~p~~~~~~----~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~ 235 (266)
+|++..++ ..++.+...+++.+++... |++.+...|+
T Consensus 93 ~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~-y~kAlel~p~ 134 (159)
T 2hr2_A 93 LNQDEGKLWISAVYSRALALDGLGRGAEAMPE-FKKVVEMIEE 134 (159)
T ss_dssp TTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHH-HHHHHHHHHH
T ss_pred CCCchHHHHHHHHHhHHHHHHHCCCHHHHHHH-HHHHHhcCCC
Confidence 99999999 9999998888888777665 7888766443
No 113
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.30 E-value=5.4e-11 Score=108.77 Aligned_cols=132 Identities=13% Similarity=0.023 Sum_probs=115.0
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
...+...|..+.+.|++++|+..|.+++...|.+.. ++.+++.+|.+.|++++|+..+++++.
T Consensus 373 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~-----------------~~~~l~~~~~~~g~~~~A~~~~~~~~~ 435 (597)
T 2xpi_A 373 AVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGP-----------------AWIGFAHSFAIEGEHDQAISAYTTAAR 435 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 456667788888899999999999999888877544 588999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 024531 163 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGP 232 (266)
Q Consensus 163 l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~ 232 (266)
.+|++..+++.+|.+|...|++++|+..|+++++++|+++.+...+..+....++.+++. ..|.+++..
T Consensus 436 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~-~~~~~~~~~ 504 (597)
T 2xpi_A 436 LFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAI-NHFQNALLL 504 (597)
T ss_dssp TTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHHH
T ss_pred hCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHH-HHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999887777665544 446777654
No 114
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.30 E-value=2.4e-11 Score=82.93 Aligned_cols=78 Identities=27% Similarity=0.331 Sum_probs=74.5
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAE 213 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~ 213 (266)
++.++|.++...|++++|+..+++++.++|+++.+++.+|.++..+|++++|+..|++++.++|++..+...++.+..
T Consensus 11 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~ 88 (91)
T 1na3_A 11 AWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 88 (91)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 688999999999999999999999999999999999999999999999999999999999999999999988887754
No 115
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.30 E-value=1.1e-11 Score=87.47 Aligned_cols=99 Identities=11% Similarity=-0.031 Sum_probs=88.2
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--CHHHHHHHHHHHH
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPE--DKSIARELRLLAE 213 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~--~~~~~~~l~~l~~ 213 (266)
++.++|.++...|++++|+..+++++.++|.+..+++.+|.++..+|++++|+..|++++.++|+ +..+...++.+..
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~ 87 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALR 87 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999 9999999999877
Q ss_pred HH-HHHHHHHHHHHhcccCCCCC
Q 024531 214 HE-KAVYKKQKEIYKGIFGPRPE 235 (266)
Q Consensus 214 ~~-~~~~~~~~~~~~k~~~~~~~ 235 (266)
.. ++..++. ..+.++....+.
T Consensus 88 ~~~~~~~~A~-~~~~~~~~~~p~ 109 (112)
T 2kck_A 88 YIEGKEVEAE-IAEARAKLEHHH 109 (112)
T ss_dssp TCSSCSHHHH-HHHHHHGGGCCC
T ss_pred HHhCCHHHHH-HHHHHHhhcccC
Confidence 77 6665544 446777665554
No 116
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.29 E-value=1.5e-11 Score=90.66 Aligned_cols=99 Identities=11% Similarity=-0.008 Sum_probs=89.0
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHE 215 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~ 215 (266)
.+.++|.+++..|+|++|+..+++++.++|+++.+++.+|.++..+|++++|+..|++++.++|++..++..++.+....
T Consensus 11 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 90 (137)
T 3q49_B 11 ELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEM 90 (137)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred HHHHHHHHHHHhcccCCCCC
Q 024531 216 KAVYKKQKEIYKGIFGPRPE 235 (266)
Q Consensus 216 ~~~~~~~~~~~~k~~~~~~~ 235 (266)
++..++.. .|.+.+...+.
T Consensus 91 ~~~~~A~~-~~~~a~~~~p~ 109 (137)
T 3q49_B 91 ESYDEAIA-NLQRAYSLAKE 109 (137)
T ss_dssp TCHHHHHH-HHHHHHHHHHH
T ss_pred hhHHHHHH-HHHHHHHHChh
Confidence 77765544 46777655443
No 117
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.29 E-value=3.6e-11 Score=90.15 Aligned_cols=131 Identities=14% Similarity=0.001 Sum_probs=104.6
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHh
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 159 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~ 159 (266)
...+..+...|..++..|++++|+..|.+++.+.+.... ......++.++|.++...|++++|+.++++
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 74 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD-----------KAAERIAYSNLGNAYIFLGEFETASEYYKK 74 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCC-----------chHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 456778899999999999999999999999998775322 122345789999999999999999999999
Q ss_pred HhcCCCCc------hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHHHHHHHH
Q 024531 160 VLGEDENN------VKALFRRGKARAELGQTDAAREDFLKAGKFAPED------KSIARELRLLAEHEKAVYKK 221 (266)
Q Consensus 160 al~l~p~~------~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~------~~~~~~l~~l~~~~~~~~~~ 221 (266)
++.+.+.. ..+++.+|.++..+|++++|+..+++++.+.+.. ..+...++.+....++..++
T Consensus 75 a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 148 (164)
T 3ro3_A 75 TLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQA 148 (164)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHH
Confidence 99875542 5789999999999999999999999999875422 34555666665555555443
No 118
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.29 E-value=1.7e-11 Score=103.00 Aligned_cols=126 Identities=10% Similarity=0.037 Sum_probs=112.4
Q ss_pred HHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHH
Q 024531 92 ALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKAL 171 (266)
Q Consensus 92 ~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 171 (266)
.+...|++++|+..|.+++...|.+.. ++.++|.++...|++++|+..+++++..+|+++.++
T Consensus 147 ~~~~~~~~~~A~~~~~~~~~~~~~~~~-----------------~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 209 (327)
T 3cv0_A 147 FFAAPNEYRECRTLLHAALEMNPNDAQ-----------------LHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLW 209 (327)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHSTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHcccHHHHHHHHHHHHhhCCCCHH-----------------HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHH
Confidence 488899999999999999999988654 689999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 024531 172 FRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPE 235 (266)
Q Consensus 172 ~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~ 235 (266)
+.+|.++...|++++|+..|++++.++|++..+...++.+....++..++.+ .|.+++...+.
T Consensus 210 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~~-~~~~a~~~~~~ 272 (327)
T 3cv0_A 210 NKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAK-QLVRAIYMQVG 272 (327)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHHTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhccHHHHHH-HHHHHHHhCCc
Confidence 9999999999999999999999999999999999999999877777655544 46676655444
No 119
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.28 E-value=4.7e-11 Score=109.17 Aligned_cols=153 Identities=13% Similarity=0.070 Sum_probs=119.7
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhh--------hchhHHH---HHHH------hhhhhhhhHHHHHH
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQ--------LFGKYRD---MALA------VKNPCHLNMAACLL 145 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~--------~~~~~~~---~~~~------l~~~~~~n~a~~~~ 145 (266)
...+...|..+...|++++|+..|.+++...|.+...- ..+...+ .... -...++.++|.++.
T Consensus 407 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 486 (597)
T 2xpi_A 407 GPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAF 486 (597)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 56777888888888888888888888888877643220 0111111 1111 12446889999999
Q ss_pred HhhCHHHHHHHHHhHhcC------CCCc-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHH
Q 024531 146 KLKRYEEAIGQCSLVLGE------DENN-VKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAV 218 (266)
Q Consensus 146 ~~~~~~~A~~~~~~al~l------~p~~-~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~ 218 (266)
+.|++++|+..+++++++ +|++ ..+++.+|.++...|++++|+..|+++++++|+++.+...+..+....++.
T Consensus 487 ~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~ 566 (597)
T 2xpi_A 487 NKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIP 566 (597)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCH
T ss_pred HhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCH
Confidence 999999999999999988 6765 789999999999999999999999999999999999999999998877776
Q ss_pred HHHHHHHHhcccCCCCCC
Q 024531 219 YKKQKEIYKGIFGPRPEP 236 (266)
Q Consensus 219 ~~~~~~~~~k~~~~~~~~ 236 (266)
.++. ..|++++...|+.
T Consensus 567 ~~A~-~~~~~~l~~~p~~ 583 (597)
T 2xpi_A 567 GLAI-THLHESLAISPNE 583 (597)
T ss_dssp HHHH-HHHHHHHHHCTTC
T ss_pred HHHH-HHHHHHHhcCCCC
Confidence 5554 4578888765553
No 120
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.28 E-value=2.6e-11 Score=99.49 Aligned_cols=104 Identities=15% Similarity=-0.065 Sum_probs=92.0
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhcc-----chhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHH
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD-----DFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAI 154 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~ 154 (266)
...+..+...|..++..|++++|+..|.+++..... .+. ...++.++|.++..+|++++|+
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~--------------~~~~~~~la~~~~~~g~~~~A~ 147 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPD--------------VAKQLNNLALLCQNQGKAEEVE 147 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH--------------HHHHHHHHHHHHHTTTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChH--------------HHHHHHHHHHHHHHcCCHHHHH
Confidence 445677889999999999999999999999998521 111 3347999999999999999999
Q ss_pred HHHHhHhcC--------CCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 024531 155 GQCSLVLGE--------DENNVKALFRRGKARAELGQTDAAREDFLKAGKF 197 (266)
Q Consensus 155 ~~~~~al~l--------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 197 (266)
.++++++.+ +|....+++.+|.++..+|++++|+..|++++.+
T Consensus 148 ~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 148 YYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp HHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 999999998 7888899999999999999999999999999987
No 121
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.27 E-value=1.9e-11 Score=102.60 Aligned_cols=137 Identities=10% Similarity=-0.028 Sum_probs=104.8
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
+..+...|..++..+++++|+..|.+++...+..... .....++.++|.+|..+|++++|+.++++++.
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~-----------~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~ 183 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV-----------YQNLYIENAIANIYAENGYLKKGIDLFEQILK 183 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCT-----------THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccH-----------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4445567888888888999999999988865442221 01233689999999999999999999999993
Q ss_pred -------CCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 024531 163 -------EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPED------KSIARELRLLAEHEKAVYKKQKEIYKGI 229 (266)
Q Consensus 163 -------l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~------~~~~~~l~~l~~~~~~~~~~~~~~~~k~ 229 (266)
..+....+++++|.+|..+|+|++|+..+++++.+.+.. ..+...++.+...+++..++....|++.
T Consensus 184 ~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~A 263 (293)
T 3u3w_A 184 QLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKA 263 (293)
T ss_dssp HHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHH
Confidence 333456789999999999999999999999999987654 6788888888877774333444445555
Q ss_pred c
Q 024531 230 F 230 (266)
Q Consensus 230 ~ 230 (266)
+
T Consensus 264 l 264 (293)
T 3u3w_A 264 S 264 (293)
T ss_dssp H
T ss_pred H
Confidence 4
No 122
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.27 E-value=4.8e-11 Score=103.73 Aligned_cols=140 Identities=16% Similarity=0.095 Sum_probs=104.3
Q ss_pred HHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhH
Q 024531 81 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 160 (266)
Q Consensus 81 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~a 160 (266)
..+..+...|..++..|+++.|+..|.+|+.+.+..... ......++.++|.+|..+|++++|+.+++++
T Consensus 141 ~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~----------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 210 (383)
T 3ulq_A 141 EKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAY----------NIRLLQCHSLFATNFLDLKQYEDAISHFQKA 210 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTT----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccc----------hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 456677777888888888888888888888776653221 1113447889999999999999999999999
Q ss_pred hcCCCCc------hHHHHHHHHHHHHcCCHHHHHHHHHHHHh-----hC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 024531 161 LGEDENN------VKALFRRGKARAELGQTDAAREDFLKAGK-----FA-PEDKSIARELRLLAEHEKAVYKKQKEIYKG 228 (266)
Q Consensus 161 l~l~p~~------~~a~~~~g~~~~~~g~~~~A~~~~~~al~-----l~-p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k 228 (266)
+.+.|.. ..+++++|.+|..+|++++|+.+|++++. .+ |....+...++.+...+++..++.. .+.+
T Consensus 211 l~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~-~~~~ 289 (383)
T 3ulq_A 211 YSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHE-YHSK 289 (383)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHH-HHHH
T ss_pred HHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHH-HHHH
Confidence 9775433 25888999999999999999999999999 46 7777888888888776666554443 3555
Q ss_pred ccC
Q 024531 229 IFG 231 (266)
Q Consensus 229 ~~~ 231 (266)
.+.
T Consensus 290 al~ 292 (383)
T 3ulq_A 290 GMA 292 (383)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 123
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.27 E-value=6.3e-11 Score=105.31 Aligned_cols=125 Identities=14% Similarity=0.014 Sum_probs=94.9
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
+..+..+|.+++..|+|++|+..|++|+++.+....... ..-...++.|+|.+|..+|++++|+.++++++.
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~--------~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~ 122 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQA--------EIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKH 122 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGC--------TTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCcccc--------chHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 456778999999999999999999999998654211100 000233578899999999999999999998886
Q ss_pred C--------CCCchHHHHHHHHHHHHc--CCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 024531 163 E--------DENNVKALFRRGKARAEL--GQTDAAREDFLKAGKFAPEDKSIARELRLLAEHE 215 (266)
Q Consensus 163 l--------~p~~~~a~~~~g~~~~~~--g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~ 215 (266)
+ .+..+.++..+|.++... ++|++|+.+|+++++++|+++++...+..+...+
T Consensus 123 i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l 185 (472)
T 4g1t_A 123 VCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRL 185 (472)
T ss_dssp HHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 5 334567888888777665 4688999999999999999988887777664443
No 124
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.25 E-value=4.7e-11 Score=84.00 Aligned_cols=75 Identities=21% Similarity=0.228 Sum_probs=67.5
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--CHHHHHHHHH
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPE--DKSIARELRL 210 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~--~~~~~~~l~~ 210 (266)
+++++|.++...|++++|+..++++++++|+++.+++.+|.+|..+|++++|+..|++++++.|. +......+..
T Consensus 9 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l~~ 85 (100)
T 3ma5_A 9 TRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSELQD 85 (100)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999875 4444444443
No 125
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.25 E-value=1.2e-11 Score=94.55 Aligned_cols=101 Identities=15% Similarity=0.103 Sum_probs=90.6
Q ss_pred hhhhhHHHHHHHhhCHHHHHHHHHhHhcC------------------CCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 024531 135 PCHLNMAACLLKLKRYEEAIGQCSLVLGE------------------DENNVKALFRRGKARAELGQTDAAREDFLKAGK 196 (266)
Q Consensus 135 ~~~~n~a~~~~~~~~~~~A~~~~~~al~l------------------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~ 196 (266)
..+.++|..+++.|+|++|+..|.+++.+ +|.+..+++++|.||..+|+|++|+.++++++.
T Consensus 12 ~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 12 EALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLK 91 (162)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHh
Confidence 36889999999999999999999999999 788889999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 024531 197 FAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEP 236 (266)
Q Consensus 197 l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~~ 236 (266)
++|++..++..++.+...+++..++... |.+.+...|..
T Consensus 92 ~~p~~~~a~~~~g~~~~~~g~~~~A~~~-~~~al~l~p~~ 130 (162)
T 3rkv_A 92 REETNEKALFRRAKARIAAWKLDEAEED-LKLLLRNHPAA 130 (162)
T ss_dssp HSTTCHHHHHHHHHHHHHTTCHHHHHHH-HHHHHHHCGGG
T ss_pred cCCcchHHHHHHHHHHHHHhcHHHHHHH-HHHHHhcCCCC
Confidence 9999999999999998888887766554 78887765543
No 126
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.24 E-value=3.7e-11 Score=101.73 Aligned_cols=141 Identities=13% Similarity=0.035 Sum_probs=92.1
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
.+..+...|..+...|+|++|+..|.+++.+.+..... .....++.++|.+|.. |++++|+.+|++++
T Consensus 75 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~-----------~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al 142 (307)
T 2ifu_A 75 AAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTP-----------DTAAMALDRAGKLMEP-LDLSKAVHLYQQAA 142 (307)
T ss_dssp HHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCH-----------HHHHHHHHHHHHHHTT-TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCH-----------HHHHHHHHHHHHHHHc-CCHHHHHHHHHHHH
Confidence 35566667777777777777777777777765432110 0123467788888887 88888888888888
Q ss_pred cCCCCc------hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH------HHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 024531 162 GEDENN------VKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK------SIARELRLLAEHEKAVYKKQKEIYKGI 229 (266)
Q Consensus 162 ~l~p~~------~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~------~~~~~l~~l~~~~~~~~~~~~~~~~k~ 229 (266)
.+.|.. ..++.++|.+|..+|+|++|+..|++++.+.|++. .+...+..+...+++..++ ...|.+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A-~~~~~~a 221 (307)
T 2ifu_A 143 AVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAA-QKCVRES 221 (307)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH-HHHHHHH
T ss_pred HHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHH-HHHHHHH
Confidence 776543 46788888888888888888888888888766432 2333344444333444433 3446666
Q ss_pred cCCCCCC
Q 024531 230 FGPRPEP 236 (266)
Q Consensus 230 ~~~~~~~ 236 (266)
+ ..+..
T Consensus 222 l-~~p~~ 227 (307)
T 2ifu_A 222 Y-SIPGF 227 (307)
T ss_dssp T-TSTTS
T ss_pred h-CCCCC
Confidence 6 54443
No 127
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.24 E-value=2.8e-11 Score=108.19 Aligned_cols=99 Identities=12% Similarity=0.114 Sum_probs=76.3
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchH------HHHHHHHHHHH---cCCHHHHHHHHHHHHhhCCCCHHHHH
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVK------ALFRRGKARAE---LGQTDAAREDFLKAGKFAPEDKSIAR 206 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~------a~~~~g~~~~~---~g~~~~A~~~~~~al~l~p~~~~~~~ 206 (266)
++.++|.++...|++++|+..+++++.++|.+.. +++.+|.++.. +|++++|+..|++++.++|++..+..
T Consensus 374 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 453 (514)
T 2gw1_A 374 VPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKI 453 (514)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHH
Confidence 5778888888888888888888888888877754 88888888888 88888888888888888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 024531 207 ELRLLAEHEKAVYKKQKEIYKGIFGPRPE 235 (266)
Q Consensus 207 ~l~~l~~~~~~~~~~~~~~~~k~~~~~~~ 235 (266)
.++.+....++..++. ..|.+++...+.
T Consensus 454 ~la~~~~~~g~~~~A~-~~~~~a~~~~~~ 481 (514)
T 2gw1_A 454 GLAQMKLQQEDIDEAI-TLFEESADLART 481 (514)
T ss_dssp HHHHHHHHTTCHHHHH-HHHHHHHHHCSS
T ss_pred HHHHHHHHhcCHHHHH-HHHHHHHHhccc
Confidence 8888776666655443 346776655443
No 128
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.24 E-value=7.8e-11 Score=80.34 Aligned_cols=84 Identities=27% Similarity=0.354 Sum_probs=77.8
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
.+..+...|..++..|++++|+..|.+++...|.+.. ++.++|.++...|++++|+..+++++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~-----------------~~~~l~~~~~~~~~~~~A~~~~~~a~ 70 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAE-----------------AWYNLGNAYYKQGDYDEAIEYYQKAL 70 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHH-----------------HHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4667889999999999999999999999999988654 58999999999999999999999999
Q ss_pred cCCCCchHHHHHHHHHHHHcC
Q 024531 162 GEDENNVKALFRRGKARAELG 182 (266)
Q Consensus 162 ~l~p~~~~a~~~~g~~~~~~g 182 (266)
.++|++..+++.+|.++..+|
T Consensus 71 ~~~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 71 ELDPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp HHCTTCHHHHHHHHHHHHHHC
T ss_pred hcCCCCHHHHHHHHHHHHhcC
Confidence 999999999999999998765
No 129
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.24 E-value=1e-11 Score=86.69 Aligned_cols=69 Identities=19% Similarity=0.263 Sum_probs=52.8
Q ss_pred hhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchH-HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHH
Q 024531 137 HLNMAACLLKLKRYEEAIGQCSLVLGEDENNVK-ALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIA 205 (266)
Q Consensus 137 ~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~-a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~ 205 (266)
.+++|.++...|++++|+..+++++..+|+++. +++.+|.++..+|++++|+..|++++.++|++..+.
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 346777777777777777777777777777777 777777777777777777777777777777777665
No 130
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.24 E-value=9.6e-11 Score=102.15 Aligned_cols=125 Identities=12% Similarity=0.058 Sum_probs=109.9
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHh
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 159 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~ 159 (266)
...+..+...|..++..|+|++|+..|.+++...|.+... ...++.++|.+|...|++++|+.++++
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~-------------~~~~~~~lg~~~~~~g~~~~A~~~~~~ 111 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRT-------------LSAIYSQLGNAYFYLGDYNKAMQYHKH 111 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHH-------------HHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhH-------------HHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 4567788899999999999999999999999998876431 334789999999999999999999999
Q ss_pred HhcC------CCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCCHHHHHHHHHHHHHHHH
Q 024531 160 VLGE------DENNVKALFRRGKARAELGQTDAAREDFLKAGKF------APEDKSIARELRLLAEHEKA 217 (266)
Q Consensus 160 al~l------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l------~p~~~~~~~~l~~l~~~~~~ 217 (266)
++.+ +|....+++.+|.+|..+|++++|+..|++++.+ .|....+...++.+....++
T Consensus 112 al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 112 DLTLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 9988 6778899999999999999999999999999999 55566788888888777777
No 131
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.22 E-value=8.1e-11 Score=102.22 Aligned_cols=144 Identities=13% Similarity=0.058 Sum_probs=103.3
Q ss_pred HHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhH
Q 024531 81 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 160 (266)
Q Consensus 81 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~a 160 (266)
..+..+...|..++..|+++.|+..|.+|+.+.+..... ......++.++|.+|..+|++++|+.++.++
T Consensus 139 ~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~----------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~a 208 (378)
T 3q15_A 139 EKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLY----------SIRTIQSLFVIAGNYDDFKHYDKALPHLEAA 208 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTC----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCc----------hhhHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 345555666666666666666666666666665542210 1113457889999999999999999999999
Q ss_pred hcCCC------CchHHHHHHHHHHHHcCCHHHHHHHHHHHHh-----hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 024531 161 LGEDE------NNVKALFRRGKARAELGQTDAAREDFLKAGK-----FAPEDKSIARELRLLAEHEKAVYKKQKEIYKGI 229 (266)
Q Consensus 161 l~l~p------~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~-----l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~ 229 (266)
+.+.+ ....+++++|.+|..+|++++|+.+|++++. .+|....+...++.+...+++..++.. .+.+.
T Consensus 209 l~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~-~~~~a 287 (378)
T 3q15_A 209 LELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQ-FIEEG 287 (378)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHH-HHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHH-HHHHH
Confidence 97633 2346888999999999999999999999999 778778888888888777776655444 46666
Q ss_pred cCCCCC
Q 024531 230 FGPRPE 235 (266)
Q Consensus 230 ~~~~~~ 235 (266)
+...+.
T Consensus 288 l~~~~~ 293 (378)
T 3q15_A 288 LDHITA 293 (378)
T ss_dssp HHHCCT
T ss_pred HHHHHH
Confidence 654443
No 132
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.22 E-value=1.3e-10 Score=82.53 Aligned_cols=99 Identities=16% Similarity=0.051 Sum_probs=89.0
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHE 215 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~ 215 (266)
.+.++|.++...|++++|+..+++++..+|.++.+++.+|.++..+|++++|+..+++++.++|++..+...++.+....
T Consensus 6 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 85 (118)
T 1elw_A 6 ELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFL 85 (118)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHH
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999988777
Q ss_pred HHHHHHHHHHHhcccCCCCC
Q 024531 216 KAVYKKQKEIYKGIFGPRPE 235 (266)
Q Consensus 216 ~~~~~~~~~~~~k~~~~~~~ 235 (266)
++..++. ..|.+.+...+.
T Consensus 86 ~~~~~A~-~~~~~~~~~~~~ 104 (118)
T 1elw_A 86 NRFEEAK-RTYEEGLKHEAN 104 (118)
T ss_dssp TCHHHHH-HHHHHHHTTCTT
T ss_pred hhHHHHH-HHHHHHHHcCCC
Confidence 7665554 457787766554
No 133
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.22 E-value=1.3e-10 Score=97.58 Aligned_cols=97 Identities=12% Similarity=-0.027 Sum_probs=77.9
Q ss_pred hhhhhhHHHHHHHhhCHHHHHHHHHhHh---cCCCCc----hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC------
Q 024531 134 NPCHLNMAACLLKLKRYEEAIGQCSLVL---GEDENN----VKALFRRGKARAELGQTDAAREDFLKAGKFAPE------ 200 (266)
Q Consensus 134 ~~~~~n~a~~~~~~~~~~~A~~~~~~al---~l~p~~----~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~------ 200 (266)
..++.++|.+|...|++++|+.++++++ ...|++ ..+++++|.+|..+|+|++|+.+|++++.+.++
T Consensus 155 ~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~ 234 (293)
T 2qfc_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMAL 234 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHH
Confidence 3478999999999999999999999999 445553 268999999999999999999999999998653
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 024531 201 DKSIARELRLLAEHEKAVYKKQKEIYKGIF 230 (266)
Q Consensus 201 ~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~ 230 (266)
-..+...++.+...+++..++....|.+.+
T Consensus 235 ~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al 264 (293)
T 2qfc_A 235 IGQLYYQRGECLRKLEYEEAEIEDAYKKAS 264 (293)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 167778888887777766655344455543
No 134
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.21 E-value=6.3e-11 Score=86.34 Aligned_cols=99 Identities=20% Similarity=0.118 Sum_probs=87.4
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCch---HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---HHHHHHHH
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENNV---KALFRRGKARAELGQTDAAREDFLKAGKFAPED---KSIARELR 209 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~---~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~---~~~~~~l~ 209 (266)
+++++|.+++..|++++|+..+++++..+|+++ .+++.+|.++..+|+|++|+..|++++..+|++ +.+...++
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la 83 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLG 83 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHH
Confidence 578999999999999999999999999999998 899999999999999999999999999999999 88899999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCC
Q 024531 210 LLAEHEKAVYKKQKEIYKGIFGPRPE 235 (266)
Q Consensus 210 ~l~~~~~~~~~~~~~~~~k~~~~~~~ 235 (266)
.+...+++..++.. .|.+++...|.
T Consensus 84 ~~~~~~g~~~~A~~-~~~~~~~~~p~ 108 (129)
T 2xev_A 84 LSQYGEGKNTEAQQ-TLQQVATQYPG 108 (129)
T ss_dssp HHHHHTTCHHHHHH-HHHHHHHHSTT
T ss_pred HHHHHcCCHHHHHH-HHHHHHHHCCC
Confidence 98877777655544 47777765443
No 135
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.21 E-value=7.9e-11 Score=98.21 Aligned_cols=104 Identities=17% Similarity=-0.021 Sum_probs=91.0
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhh-----ccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHH
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYM-----GDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAI 154 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~ 154 (266)
...+..+...|..++..|++++|+..|.+++... ++... ...++.++|.++...|++++|+
T Consensus 108 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~--------------~~~~~~~la~~~~~~~~~~~A~ 173 (311)
T 3nf1_A 108 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPD--------------VAKQLNNLALLCQNQGKYEEVE 173 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH--------------HHHHHHHHHHHHHTTTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChH--------------HHHHHHHHHHHHHHcCCHHHHH
Confidence 3456677889999999999999999999999986 22121 3347899999999999999999
Q ss_pred HHHHhHhcC--------CCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 024531 155 GQCSLVLGE--------DENNVKALFRRGKARAELGQTDAAREDFLKAGKF 197 (266)
Q Consensus 155 ~~~~~al~l--------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 197 (266)
.++++++.+ +|....+++.+|.++..+|++++|+..|++++.+
T Consensus 174 ~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 224 (311)
T 3nf1_A 174 YYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTR 224 (311)
T ss_dssp HHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 999999988 7778889999999999999999999999999985
No 136
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.21 E-value=2.1e-11 Score=96.28 Aligned_cols=101 Identities=10% Similarity=-0.090 Sum_probs=89.7
Q ss_pred hhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCch----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 024531 135 PCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNV----------------KALFRRGKARAELGQTDAAREDFLKAGKFA 198 (266)
Q Consensus 135 ~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~----------------~a~~~~g~~~~~~g~~~~A~~~~~~al~l~ 198 (266)
..+.++|.+++..|+|++|+..|.+++.+.|.++ .+++++|.++..+|+|++|+.+|++++.++
T Consensus 39 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~ 118 (198)
T 2fbn_A 39 FDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKID 118 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 3688999999999999999999999999999887 899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 024531 199 PEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEP 236 (266)
Q Consensus 199 p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~~ 236 (266)
|++..+...++.+...+++..++.. .|.+.+...+..
T Consensus 119 p~~~~~~~~lg~~~~~~~~~~~A~~-~~~~al~~~p~~ 155 (198)
T 2fbn_A 119 KNNVKALYKLGVANMYFGFLEEAKE-NLYKAASLNPNN 155 (198)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHH-HHHHHHHHSTTC
T ss_pred cccHHHHHHHHHHHHHcccHHHHHH-HHHHHHHHCCCc
Confidence 9999999999999887777765544 477777665543
No 137
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.21 E-value=1.9e-10 Score=99.98 Aligned_cols=109 Identities=17% Similarity=0.206 Sum_probs=95.7
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHh
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 159 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~ 159 (266)
...+..+...|..+...|+|++|+..|.+++.+.+.... ......++.|+|.+|..+|++++|+.++++
T Consensus 181 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~-----------~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~ 249 (383)
T 3ulq_A 181 IRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQ-----------PQLMGRTLYNIGLCKNSQSQYEDAIPYFKR 249 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCC-----------hHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 345677889999999999999999999999999875432 122445799999999999999999999999
Q ss_pred Hhc-----CC-CCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 024531 160 VLG-----ED-ENNVKALFRRGKARAELGQTDAAREDFLKAGKFAP 199 (266)
Q Consensus 160 al~-----l~-p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p 199 (266)
++. .+ |..+.+++++|.++..+|++++|...|++++.+.+
T Consensus 250 al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 250 AIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 999 56 88899999999999999999999999999999854
No 138
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.20 E-value=3.2e-10 Score=98.48 Aligned_cols=109 Identities=14% Similarity=-0.016 Sum_probs=95.8
Q ss_pred HHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhH
Q 024531 81 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 160 (266)
Q Consensus 81 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~a 160 (266)
..+..+...|..+...|+|++|+..|.+++.+.+.... ......++.|+|.+|..+|++++|+.+++++
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~-----------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~a 248 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQN-----------DRFIAISLLNIANSYDRSGDDQMAVEHFQKA 248 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-----------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC-----------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 45777889999999999999999999999998754221 1124457999999999999999999999999
Q ss_pred hc-----CCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 024531 161 LG-----EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPE 200 (266)
Q Consensus 161 l~-----l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~ 200 (266)
+. .+|....+++.+|.++..+|++++|+..+++++.+.+.
T Consensus 249 l~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 249 AKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 99 88989999999999999999999999999999999653
No 139
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.19 E-value=1e-10 Score=85.21 Aligned_cols=100 Identities=13% Similarity=0.063 Sum_probs=88.8
Q ss_pred hhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 024531 134 NPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAE 213 (266)
Q Consensus 134 ~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~ 213 (266)
..++.++|.++...|++++|+..+++++..+|.+..+++.+|.++..+|++++|+..|++++.++|++..+...++.+..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 95 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALE 95 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred HHHHHHHHHHHHHhcccCCCC
Q 024531 214 HEKAVYKKQKEIYKGIFGPRP 234 (266)
Q Consensus 214 ~~~~~~~~~~~~~~k~~~~~~ 234 (266)
..++..++.+ .|.+.+...+
T Consensus 96 ~~~~~~~A~~-~~~~~~~~~p 115 (133)
T 2lni_A 96 AMKDYTKAMD-VYQKALDLDS 115 (133)
T ss_dssp HTTCHHHHHH-HHHHHHHHCG
T ss_pred HHhhHHHHHH-HHHHHHHhCC
Confidence 7777665544 4677665433
No 140
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.19 E-value=1.8e-10 Score=96.00 Aligned_cols=141 Identities=16% Similarity=0.089 Sum_probs=112.2
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHh
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 159 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~ 159 (266)
...+..+...|..++..|++++|+..|.+++.......... ......++.++|.++...|++++|+.++.+
T Consensus 66 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 136 (311)
T 3nf1_A 66 PDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKD---------HPAVAATLNNLAVLYGKRGKYKEAEPLCKR 136 (311)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCC---------ChHHHHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 44566778899999999999999999999999852210000 001334789999999999999999999999
Q ss_pred HhcCC--------CCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCCHHHHHHHHHHHHHHHHHHHHHH
Q 024531 160 VLGED--------ENNVKALFRRGKARAELGQTDAAREDFLKAGKF--------APEDKSIARELRLLAEHEKAVYKKQK 223 (266)
Q Consensus 160 al~l~--------p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l--------~p~~~~~~~~l~~l~~~~~~~~~~~~ 223 (266)
++.+. |....+++.+|.++..+|++++|+..|++++.+ +|....+...++.+....++..++..
T Consensus 137 a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 216 (311)
T 3nf1_A 137 ALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAET 216 (311)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 99874 667789999999999999999999999999998 67777788888888777776655544
Q ss_pred HHHhccc
Q 024531 224 EIYKGIF 230 (266)
Q Consensus 224 ~~~~k~~ 230 (266)
. +.+++
T Consensus 217 ~-~~~al 222 (311)
T 3nf1_A 217 L-YKEIL 222 (311)
T ss_dssp H-HHHHH
T ss_pred H-HHHHH
Confidence 3 45554
No 141
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.19 E-value=4.6e-10 Score=101.13 Aligned_cols=143 Identities=13% Similarity=0.018 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHH
Q 024531 78 ERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQC 157 (266)
Q Consensus 78 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~ 157 (266)
.....+....+.+..+..+|+|++|+..|.++++........+ ......++.|+|.+|..+|+|++|+.++
T Consensus 304 ~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~---------Hp~~a~~~~nLa~~y~~~g~~~eA~~~~ 374 (490)
T 3n71_A 304 EMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADT---------NLYVLRLLSIASEVLSYLQAYEEASHYA 374 (490)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTT---------SHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCC---------CHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 3345566667778888899999999999999998764311100 0013447999999999999999999999
Q ss_pred HhHhcC--------CCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCCHHHHH---HHHHHHHHHHHHHHH
Q 024531 158 SLVLGE--------DENNVKALFRRGKARAELGQTDAAREDFLKAGKF-----APEDKSIAR---ELRLLAEHEKAVYKK 221 (266)
Q Consensus 158 ~~al~l--------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l-----~p~~~~~~~---~l~~l~~~~~~~~~~ 221 (266)
.++|.+ .|+-...+.++|.+|..+|+|++|+..|++|+.+ .|+++.+.. .|..+...++.+.++
T Consensus 375 ~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~a 454 (490)
T 3n71_A 375 RRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQN 454 (490)
T ss_dssp HHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 999955 3444578999999999999999999999999985 677776665 444444445555444
Q ss_pred HHHHHhccc
Q 024531 222 QKEIYKGIF 230 (266)
Q Consensus 222 ~~~~~~k~~ 230 (266)
+.. |+++-
T Consensus 455 e~~-~~~~~ 462 (490)
T 3n71_A 455 EFM-YHKMR 462 (490)
T ss_dssp HHH-HHHHH
T ss_pred HHH-HHHHH
Confidence 443 55553
No 142
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.18 E-value=1.7e-10 Score=80.31 Aligned_cols=59 Identities=12% Similarity=0.018 Sum_probs=47.9
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK 202 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 202 (266)
++.++|.++..+|++++|+.+|++++.++|++..++++ +.+.+|+..|+++...+|++.
T Consensus 37 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 37 AYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------KMVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------HHHHHHHHHHCCTTHHHHCCS
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------HHHHHHHHHHHHHhccCcccc
Confidence 78888888888888888888888888888888887754 667778888888888777653
No 143
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.18 E-value=2.2e-10 Score=86.26 Aligned_cols=102 Identities=15% Similarity=0.116 Sum_probs=87.3
Q ss_pred ccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhh---CHHHHHHHHHhHhcCC-C-CchHHH
Q 024531 97 EKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLK---RYEEAIGQCSLVLGED-E-NNVKAL 171 (266)
Q Consensus 97 g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~---~~~~A~~~~~~al~l~-p-~~~~a~ 171 (266)
.....+.+.|.+.+...+.+.. +.+++|.|+.+.+ +..+++..++.+++.+ | ++.+++
T Consensus 12 ~~l~~~~~~y~~e~~~~~~~~~-----------------~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~l 74 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSVSKS-----------------TQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYV 74 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHH-----------------HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCCCcHH-----------------HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHH
Confidence 3456677788888776665443 6899999999988 6779999999999998 7 678999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 024531 172 FRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHE 215 (266)
Q Consensus 172 ~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~ 215 (266)
|.+|.+++++|+|++|.++++++|+++|+|..+......+....
T Consensus 75 Y~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~~~ 118 (152)
T 1pc2_A 75 FYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAM 118 (152)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998777665444
No 144
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.17 E-value=5e-10 Score=94.63 Aligned_cols=133 Identities=7% Similarity=-0.097 Sum_probs=108.0
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
...+...|..+...|++++|...|++++...|.+... ++.++|.++.+.|++++|+..|+++++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~----------------~~~~~~~~~~~~~~~~~A~~~~~~a~~ 162 (308)
T 2ond_A 99 MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTL----------------VYIQYMKFARRAEGIKSGRMIFKKARE 162 (308)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHH----------------HHHHHHHHHHHHHCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccH----------------HHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 4566778888899999999999999999998875431 588899999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 024531 163 EDENNVKALFRRGKARAE-LGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGP 232 (266)
Q Consensus 163 l~p~~~~a~~~~g~~~~~-~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~ 232 (266)
.+|.+..++...+..... +|++++|...|++++.++|+++.+...+..+...+++.. ..+..|.+.+..
T Consensus 163 ~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~-~A~~~~~~al~~ 232 (308)
T 2ond_A 163 DARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDN-NTRVLFERVLTS 232 (308)
T ss_dssp STTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHH-HHHHHHHHHHHS
T ss_pred cCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHH-HHHHHHHHHHhc
Confidence 999888887766655433 799999999999999999999999888887765555554 445667887764
No 145
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.17 E-value=2.7e-10 Score=95.44 Aligned_cols=123 Identities=15% Similarity=0.093 Sum_probs=104.1
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
.+..+...|..++..|++++|+..|.+++...|.+... ...++.++|.++...|++++|+..+++++
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~-------------~~~~~~~l~~~~~~~g~~~~A~~~~~~al 70 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKT-------------LSAIYSQLGNAYFYLHDYAKALEYHHHDL 70 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHH-------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHH-------------HHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 35577889999999999999999999999998876431 34478999999999999999999999998
Q ss_pred cC------CCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHHHH
Q 024531 162 GE------DENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPED------KSIARELRLLAEHEKA 217 (266)
Q Consensus 162 ~l------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~------~~~~~~l~~l~~~~~~ 217 (266)
.+ .|....+++.+|.++..+|++++|+..+++++.+.|.. ..+...++.+....++
T Consensus 71 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 71 TLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 87 55667899999999999999999999999999987643 2366677777666666
No 146
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.16 E-value=1.7e-10 Score=97.56 Aligned_cols=109 Identities=15% Similarity=0.048 Sum_probs=92.5
Q ss_pred HHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhH
Q 024531 81 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 160 (266)
Q Consensus 81 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~a 160 (266)
..+..+...|..+.. |++++|+..|++++.+.+.... ......++.++|.+|..+|+|++|+.+|+++
T Consensus 114 ~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~-----------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 181 (307)
T 2ifu_A 114 TAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEER-----------LRQAAELIGKASRLLVRQQKFDEAAASLQKE 181 (307)
T ss_dssp HHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCC-----------hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 346778889999998 9999999999999999875322 1113447999999999999999999999999
Q ss_pred hcCCCCc------hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q 024531 161 LGEDENN------VKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK 202 (266)
Q Consensus 161 l~l~p~~------~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 202 (266)
+.+.|.+ ..+++.+|.++..+|++++|+.+|++++ ++|+..
T Consensus 182 l~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 182 KSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTST
T ss_pred HHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCC
Confidence 9986644 3478899999999999999999999999 999754
No 147
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.16 E-value=5.6e-11 Score=92.84 Aligned_cols=82 Identities=85% Similarity=1.325 Sum_probs=59.3
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeeccccccCCCCCCCCHHHHHH
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTVEERIG 81 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~ 81 (266)
+||.+..+|+||+.+|..|+.||++.|.|.|.++||..|.+.++.||+++++.|.|+|.++....+....|+|+.++++.
T Consensus 98 ~lG~g~~vi~G~eeaL~gMk~Ge~~~v~iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~v~~~~e~~~~~~mt~eErl~ 177 (180)
T 2f4e_A 98 VLGKEKKELAGLAIGVASMKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIG 177 (180)
T ss_dssp ETTSCCGGGHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEEESCBCCC-------------
T ss_pred EeCCCCchhHHHHHHHhCCCCCCEEEEEECchHhCCcCCcccCCCcCCCCeEEEEEEEEEEecCccccccccCCHHHHHh
Confidence 46765359999999999999999999999999999998864456799999999999999998877666689999998877
Q ss_pred HH
Q 024531 82 AA 83 (266)
Q Consensus 82 ~~ 83 (266)
.+
T Consensus 178 ~A 179 (180)
T 2f4e_A 178 AA 179 (180)
T ss_dssp --
T ss_pred hc
Confidence 65
No 148
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.16 E-value=1.7e-10 Score=96.84 Aligned_cols=107 Identities=16% Similarity=0.140 Sum_probs=89.5
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
.+..+...|..++..|+|++|+..|.+++......... ......+++|+|.+|..+|+|++|+.++++++
T Consensus 154 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~----------~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al 223 (293)
T 3u3w_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDN----------EEFDVKVRYNHAKALYLDSRYEESLYQVNKAI 223 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCC----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccc----------hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 35568899999999999999999999999765432110 22245579999999999999999999999999
Q ss_pred cCCCCc------hHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhC
Q 024531 162 GEDENN------VKALFRRGKARAELG-QTDAAREDFLKAGKFA 198 (266)
Q Consensus 162 ~l~p~~------~~a~~~~g~~~~~~g-~~~~A~~~~~~al~l~ 198 (266)
.+.+.. ..+++++|.++..+| ++++|+.+|++|+.+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 224 EISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 886543 789999999999999 5799999999999864
No 149
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.15 E-value=3.7e-11 Score=100.65 Aligned_cols=131 Identities=13% Similarity=0.162 Sum_probs=107.7
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
....+..+|..++..|+|++|+..|.+++.+.|++.. +++++|.+|..+|++++|+.++.+++
T Consensus 37 ~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~-----------------~~~~lg~~~~~~g~~~~A~~~~~~al 99 (281)
T 2c2l_A 37 VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVK-----------------AHFFLGQCQLEMESYDEAIANLQRAY 99 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3567788999999999999999999999999998655 69999999999999999999999999
Q ss_pred cCCCCch-------H------------------------HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 024531 162 GEDENNV-------K------------------------ALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRL 210 (266)
Q Consensus 162 ~l~p~~~-------~------------------------a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~ 210 (266)
.++|++. . ....++. ...|++++|++.|+++++++|++......+..
T Consensus 100 ~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~--l~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 177 (281)
T 2c2l_A 100 SLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLTR--LIAAERERELEECQRNHEGHEDDGHIRAQQAC 177 (281)
T ss_dssp HHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHH--HHHHHHHHHHTTTSGGGTTTSCHHHHTHHHHH
T ss_pred HhCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH--HHHHHHHHHHHHHHhhhccccchhhhhhHHHH
Confidence 9988652 1 1111222 23689999999999999999999988888888
Q ss_pred HHHHHHHHHHHHHHHHhcccC
Q 024531 211 LAEHEKAVYKKQKEIYKGIFG 231 (266)
Q Consensus 211 l~~~~~~~~~~~~~~~~k~~~ 231 (266)
+.....+..+....+|.++..
T Consensus 178 ~~~~~~~~~~~a~~~f~~a~~ 198 (281)
T 2c2l_A 178 IEAKHDKYMADMDELFSQVDE 198 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHHHHHhhhc
Confidence 777765656667777877655
No 150
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.15 E-value=1.9e-10 Score=97.23 Aligned_cols=137 Identities=15% Similarity=0.065 Sum_probs=107.2
Q ss_pred HHHHHHHHHhHHHHh-------hccH-------HHHHHHHHHHHh-hhccchhhhhchhHHHHHHHhhhhhhhhHHHHHH
Q 024531 81 GAADRRKMDGNALFK-------EEKL-------EEAMQQYEMAIA-YMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLL 145 (266)
Q Consensus 81 ~~~~~~~~~g~~~~~-------~g~~-------~~A~~~y~~al~-~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~ 145 (266)
..+..+...|..+.. .|++ ++|+..|.+|+. +.|+... ++.++|..+.
T Consensus 48 ~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~-----------------~~~~~~~~~~ 110 (308)
T 2ond_A 48 HHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNML-----------------LYFAYADYEE 110 (308)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHH-----------------HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHH-----------------HHHHHHHHHH
Confidence 345556666666653 4775 999999999999 6887654 6999999999
Q ss_pred HhhCHHHHHHHHHhHhcCCCCchH-HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 024531 146 KLKRYEEAIGQCSLVLGEDENNVK-ALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKE 224 (266)
Q Consensus 146 ~~~~~~~A~~~~~~al~l~p~~~~-a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~ 224 (266)
..|++++|...|+++++++|.++. +|..+|.++..+|++++|...|+++++++|.+..+......+........+....
T Consensus 111 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~ 190 (308)
T 2ond_A 111 SRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFK 190 (308)
T ss_dssp HTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHH
T ss_pred hcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHH
Confidence 999999999999999999999987 9999999999999999999999999999999877765444432211122334455
Q ss_pred HHhcccCCCC
Q 024531 225 IYKGIFGPRP 234 (266)
Q Consensus 225 ~~~k~~~~~~ 234 (266)
.|.+.+...+
T Consensus 191 ~~~~al~~~p 200 (308)
T 2ond_A 191 IFELGLKKYG 200 (308)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHhCC
Confidence 6777665433
No 151
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.15 E-value=1.1e-09 Score=100.68 Aligned_cols=147 Identities=14% Similarity=0.075 Sum_probs=122.5
Q ss_pred HHHHHHHHHHhHHHHhhcc----------HHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhh-
Q 024531 80 IGAADRRKMDGNALFKEEK----------LEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLK- 148 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~----------~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~- 148 (266)
++....+..+|..+...|+ +++|+..|.+++..+|.... ++++++.++.+++
T Consensus 60 P~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~-----------------aW~hR~w~l~~l~~ 122 (567)
T 1dce_A 60 PDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYG-----------------TWHHRCWLLSRLPE 122 (567)
T ss_dssp TTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHTCSS
T ss_pred chhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHccc
Confidence 3445667788888888888 99999999999999999766 6999999999999
Q ss_pred -CHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH-----------
Q 024531 149 -RYEEAIGQCSLVLGEDENNVKALFRRGKARAELG-QTDAAREDFLKAGKFAPEDKSIARELRLLAEHE----------- 215 (266)
Q Consensus 149 -~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g-~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~----------- 215 (266)
+|++|+.+|++++++||.|..||..++.++..+| .++++++++.++++.+|+|..++.....+...+
T Consensus 123 ~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~~~~ 202 (567)
T 1dce_A 123 PNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGR 202 (567)
T ss_dssp CCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCS
T ss_pred ccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhccccccccccc
Confidence 7899999999999999999999999999999999 999999999999999999999999999887664
Q ss_pred --HHHHHHHHHHHhcccCCCCCCcccchhHHH
Q 024531 216 --KAVYKKQKEIYKGIFGPRPEPKQKKNWLII 245 (266)
Q Consensus 216 --~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 245 (266)
....+++-.++.+++... |...++|.-.
T Consensus 203 ~~~~~~~eel~~~~~ai~~~--P~~~saW~y~ 232 (567)
T 1dce_A 203 LPENVLLKELELVQNAFFTD--PNDQSAWFYH 232 (567)
T ss_dssp SCHHHHHHHHHHHHHHHHHC--SSCSHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhhC--CCCccHHHHH
Confidence 122344445566665433 3445677533
No 152
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.14 E-value=3.4e-10 Score=85.73 Aligned_cols=102 Identities=16% Similarity=-0.015 Sum_probs=90.4
Q ss_pred hhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 024531 134 NPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAE 213 (266)
Q Consensus 134 ~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~ 213 (266)
...+.++|.++...|++++|+..+.+++..+|.+..+++.+|.++..+|++++|+..|++++.++|++..+...++.+..
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~ 92 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM 92 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 34688999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred HHHHHHHHHHHHHhcccCCCCCC
Q 024531 214 HEKAVYKKQKEIYKGIFGPRPEP 236 (266)
Q Consensus 214 ~~~~~~~~~~~~~~k~~~~~~~~ 236 (266)
.+++..++.. .|.+++...+..
T Consensus 93 ~~~~~~~A~~-~~~~a~~~~p~~ 114 (166)
T 1a17_A 93 ALGKFRAALR-DYETVVKVKPHD 114 (166)
T ss_dssp HTTCHHHHHH-HHHHHHHHSTTC
T ss_pred HhccHHHHHH-HHHHHHHhCCCC
Confidence 7777665544 477777655543
No 153
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.14 E-value=2.7e-10 Score=98.51 Aligned_cols=122 Identities=16% Similarity=0.091 Sum_probs=104.8
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
+..+...|..++..|+|++|+..|++++...|.+... ...++.++|.++...|++++|+.++++++.
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~-------------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 75 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKT-------------LSAIYSQLGNAYFYLHDYAKALEYHHHDLT 75 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHH-------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHH-------------HHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 5677889999999999999999999999998876431 344789999999999999999999999987
Q ss_pred C------CCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHHHH
Q 024531 163 E------DENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPED------KSIARELRLLAEHEKA 217 (266)
Q Consensus 163 l------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~------~~~~~~l~~l~~~~~~ 217 (266)
+ .|....+++.+|.++..+|++++|+..|++++.+.|.. ..+...++.+....++
T Consensus 76 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 142 (406)
T 3sf4_A 76 LARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 142 (406)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCC
Confidence 7 45567899999999999999999999999999998753 3477777777766666
No 154
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.13 E-value=4.5e-10 Score=97.13 Aligned_cols=140 Identities=13% Similarity=-0.005 Sum_probs=111.8
Q ss_pred HHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhH
Q 024531 81 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 160 (266)
Q Consensus 81 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~a 160 (266)
..+..+...|..++..|++++|+..|.+++.+.+.... ......++.++|.++...|++++|+.+++++
T Consensus 185 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~-----------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 253 (406)
T 3sf4_A 185 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD-----------KAAERRAYSNLGNAYIFLGEFETASEYYKKT 253 (406)
T ss_dssp HHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCC-----------cHHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Confidence 34556788899999999999999999999999876432 1123447899999999999999999999999
Q ss_pred hcCCCCc------hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 024531 161 LGEDENN------VKALFRRGKARAELGQTDAAREDFLKAGKFAPED------KSIARELRLLAEHEKAVYKKQKEIYKG 228 (266)
Q Consensus 161 l~l~p~~------~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~------~~~~~~l~~l~~~~~~~~~~~~~~~~k 228 (266)
+.+.|.. ..+++.+|.++..+|++++|+..|++++.+.+.. ..+...++.+....++..++.. .|.+
T Consensus 254 l~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~-~~~~ 332 (406)
T 3sf4_A 254 LLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMH-FAEK 332 (406)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHH-HHHH
T ss_pred HHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHH-HHHH
Confidence 9887655 6789999999999999999999999999986643 5667777777766666554443 4566
Q ss_pred ccCC
Q 024531 229 IFGP 232 (266)
Q Consensus 229 ~~~~ 232 (266)
.+..
T Consensus 333 al~~ 336 (406)
T 3sf4_A 333 HLEI 336 (406)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 155
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.13 E-value=3.4e-10 Score=100.56 Aligned_cols=36 Identities=11% Similarity=0.260 Sum_probs=31.8
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchh
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM 118 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~ 118 (266)
...+...|..+...|++++|+..|.+++...|++..
T Consensus 247 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~ 282 (472)
T 4g1t_A 247 TDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAY 282 (472)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHH
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHH
Confidence 455678899999999999999999999999998654
No 156
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.13 E-value=4e-09 Score=88.34 Aligned_cols=140 Identities=13% Similarity=-0.001 Sum_probs=110.3
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHh
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 159 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~ 159 (266)
+.....+...+..++..|+|++|+..|.+++...+..... ......++++|.++...|++++|+.++++
T Consensus 72 ~~~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 140 (293)
T 2qfc_A 72 IERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEF-----------QQFLQWQYYVAAYVLKKVDYEYCILELKK 140 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHH-----------HHHHHHHHHHHHHHHTSSCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhH-----------HHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 4556677889999999999999999999999987653221 11233467799999999999999999999
Q ss_pred HhcCCCCc------hHHHHHHHHHHHHcCCHHHHHHHHHHHH---hhCCCCH----HHHHHHHHHHHHHHHHHHHHHHHH
Q 024531 160 VLGEDENN------VKALFRRGKARAELGQTDAAREDFLKAG---KFAPEDK----SIARELRLLAEHEKAVYKKQKEIY 226 (266)
Q Consensus 160 al~l~p~~------~~a~~~~g~~~~~~g~~~~A~~~~~~al---~l~p~~~----~~~~~l~~l~~~~~~~~~~~~~~~ 226 (266)
++.+.+.. ..+++.+|.+|..+|+|++|+..|++++ ...|++. .+...++.+...+++..++... |
T Consensus 141 al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~-~ 219 (293)
T 2qfc_A 141 LLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQ-V 219 (293)
T ss_dssp HHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHH-H
T ss_pred HHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHH-H
Confidence 99875543 5689999999999999999999999999 5566643 5777888887777777655544 5
Q ss_pred hcccC
Q 024531 227 KGIFG 231 (266)
Q Consensus 227 ~k~~~ 231 (266)
.+.+.
T Consensus 220 ~kal~ 224 (293)
T 2qfc_A 220 NKAIE 224 (293)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 157
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.13 E-value=4.9e-10 Score=83.12 Aligned_cols=99 Identities=16% Similarity=0.046 Sum_probs=88.2
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCc---hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENN---VKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLA 212 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~---~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~ 212 (266)
.+..+|.++...|++++|+..+++++.++|++ ..+++.+|.++..+|++++|+..|++++.++|++..+...++.+.
T Consensus 30 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 109 (148)
T 2dba_A 30 QLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQAL 109 (148)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHHHH
Confidence 58899999999999999999999999999998 899999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHhcccCCCCC
Q 024531 213 EHEKAVYKKQKEIYKGIFGPRPE 235 (266)
Q Consensus 213 ~~~~~~~~~~~~~~~k~~~~~~~ 235 (266)
...++..++. ..|.+.+...+.
T Consensus 110 ~~~~~~~~A~-~~~~~al~~~p~ 131 (148)
T 2dba_A 110 EKLGRLDQAV-LDLQRCVSLEPK 131 (148)
T ss_dssp HHHTCHHHHH-HHHHHHHHHCSS
T ss_pred HHcCCHHHHH-HHHHHHHHcCCC
Confidence 7777766554 446777655443
No 158
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.13 E-value=4e-10 Score=88.36 Aligned_cols=138 Identities=14% Similarity=0.095 Sum_probs=105.8
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
.+..+...|..++..|++++|+..|.+++.+...... ......++.++|.++...|++++|+.++.+++
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 93 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGD-----------HTAEHRALHQVGMVERMAGNWDAARRCFLEER 93 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCC-----------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4677889999999999999999999999997654221 11134479999999999999999999999999
Q ss_pred cC---CC----CchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC--CCH----HHHHHHHHHHHHHHHHHHHHHHHHhc
Q 024531 162 GE---DE----NNVKALFRRGKARAELGQTDAAREDFLKAGKFAP--EDK----SIARELRLLAEHEKAVYKKQKEIYKG 228 (266)
Q Consensus 162 ~l---~p----~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p--~~~----~~~~~l~~l~~~~~~~~~~~~~~~~k 228 (266)
.+ .+ ....+++++|.++..+|++++|+..+++++.+.+ ++. .+...++.+....++..++.. .+.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~-~~~~ 172 (203)
T 3gw4_A 94 ELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQ-HWLR 172 (203)
T ss_dssp HHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH-HHHH
T ss_pred HHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHH-HHHH
Confidence 88 33 3456799999999999999999999999998743 222 234566666666665554433 3555
Q ss_pred ccC
Q 024531 229 IFG 231 (266)
Q Consensus 229 ~~~ 231 (266)
.+.
T Consensus 173 al~ 175 (203)
T 3gw4_A 173 ARD 175 (203)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 159
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.12 E-value=1.8e-09 Score=89.17 Aligned_cols=128 Identities=15% Similarity=0.031 Sum_probs=69.1
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhh------hh----chhHHHHH-------HHhhhhhhhhHHHHHH
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMF------QL----FGKYRDMA-------LAVKNPCHLNMAACLL 145 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~------~~----~~~~~~~~-------~~l~~~~~~n~a~~~~ 145 (266)
+..+...|..++..|++++|+..|.++++..+..... .. .+...+-. ..-...++.++|.+|.
T Consensus 6 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~ 85 (273)
T 1ouv_A 6 PKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYY 85 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHh
Confidence 4455666666666677777777777666622111000 00 00000000 0001224566666666
Q ss_pred H----hhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 024531 146 K----LKRYEEAIGQCSLVLGEDENNVKALFRRGKARAE----LGQTDAAREDFLKAGKFAPEDKSIARELRLLAEH 214 (266)
Q Consensus 146 ~----~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~ 214 (266)
. .+++++|+..+++++..+ ++.+++.+|.+|.. .+++++|+.+|+++++++ +..+...++.+...
T Consensus 86 ~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~ 158 (273)
T 1ouv_A 86 SGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDA 158 (273)
T ss_dssp HTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred CCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHc
Confidence 6 666666666666666653 56666666666666 666666666666666654 35555556655444
No 160
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.12 E-value=5.8e-10 Score=80.52 Aligned_cols=100 Identities=16% Similarity=0.130 Sum_probs=88.7
Q ss_pred hhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 024531 134 NPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAE 213 (266)
Q Consensus 134 ~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~ 213 (266)
..++..+|.++...|++++|+..+++++..+|+++.+++.+|.++..+|++++|+..+++++.++|++..+...++.+..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (131)
T 2vyi_A 12 AERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALS 91 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHH
Confidence 34688999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred HHHHHHHHHHHHHhcccCCCC
Q 024531 214 HEKAVYKKQKEIYKGIFGPRP 234 (266)
Q Consensus 214 ~~~~~~~~~~~~~~k~~~~~~ 234 (266)
..++..++.. .|.+.+...+
T Consensus 92 ~~~~~~~A~~-~~~~~~~~~p 111 (131)
T 2vyi_A 92 SLNKHVEAVA-YYKKALELDP 111 (131)
T ss_dssp HTTCHHHHHH-HHHHHHHHST
T ss_pred HhCCHHHHHH-HHHHHHhcCc
Confidence 7777655544 4677765544
No 161
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.11 E-value=4.3e-10 Score=94.16 Aligned_cols=141 Identities=13% Similarity=-0.005 Sum_probs=111.3
Q ss_pred HHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhH
Q 024531 81 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 160 (266)
Q Consensus 81 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~a 160 (266)
..+..+...|..++..|++++|+..|.+++...+.... ......++.++|.++...|++++|+..++++
T Consensus 181 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 249 (338)
T 3ro2_A 181 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD-----------KAAERRAYSNLGNAYIFLGEFETASEYYKKT 249 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTC-----------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCC-----------hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34556778899999999999999999999998765322 1123447899999999999999999999999
Q ss_pred hcCCCCc------hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 024531 161 LGEDENN------VKALFRRGKARAELGQTDAAREDFLKAGKFAPED------KSIARELRLLAEHEKAVYKKQKEIYKG 228 (266)
Q Consensus 161 l~l~p~~------~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~------~~~~~~l~~l~~~~~~~~~~~~~~~~k 228 (266)
+.+.|.. ..+++.+|.++..+|++++|+..|++++.+.|.. ..+...++.+....++..++.. .|.+
T Consensus 250 l~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~-~~~~ 328 (338)
T 3ro2_A 250 LLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMH-FAEK 328 (338)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHH-HHHH
T ss_pred HHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHH-HHHH
Confidence 9886654 6789999999999999999999999999987643 4466677777766666654444 4666
Q ss_pred ccCCC
Q 024531 229 IFGPR 233 (266)
Q Consensus 229 ~~~~~ 233 (266)
.+...
T Consensus 329 a~~~~ 333 (338)
T 3ro2_A 329 HLEIS 333 (338)
T ss_dssp HHHC-
T ss_pred HHHHH
Confidence 65443
No 162
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.11 E-value=9.1e-11 Score=100.94 Aligned_cols=103 Identities=10% Similarity=-0.013 Sum_probs=57.7
Q ss_pred HHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCC
Q 024531 85 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED 164 (266)
Q Consensus 85 ~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~ 164 (266)
.+..+|..++..|+|++|+..|.+++.++|.+.. +++++|.+|..+|++++|+.+|+++++++
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------a~~~lg~a~~~~g~~~~A~~~l~~al~l~ 294 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPK-----------------ALFRRGKAKAELGQMDSARDDFRKAQKYA 294 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHTTTCHHHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 6788999999999999999999999999998655 69999999999999999999999999999
Q ss_pred CCchHHHHHHHHH-HHHcCCHHHHHHHHHHHHhhCCCCHHH
Q 024531 165 ENNVKALFRRGKA-RAELGQTDAAREDFLKAGKFAPEDKSI 204 (266)
Q Consensus 165 p~~~~a~~~~g~~-~~~~g~~~~A~~~~~~al~l~p~~~~~ 204 (266)
|++..++..++.+ ....+..+++...|.+++..+|+++..
T Consensus 295 p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~~~ 335 (338)
T 2if4_A 295 PDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGGAK 335 (338)
T ss_dssp -----------------------------------------
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCC
Confidence 9999999999998 455677889999999999999987653
No 163
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.10 E-value=8.4e-10 Score=78.95 Aligned_cols=100 Identities=24% Similarity=0.259 Sum_probs=87.8
Q ss_pred hhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 024531 135 PCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEH 214 (266)
Q Consensus 135 ~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~ 214 (266)
.++.++|.++...|++++|+..+.+++..+|.+..+++.+|.++...|++++|+..|++++.++|++..+...+..+...
T Consensus 10 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 89 (125)
T 1na0_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK 89 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH
Confidence 36889999999999999999999999999999999999999999999999999999999999999999999999988777
Q ss_pred HHHHHHHHHHHHhcccCCCCC
Q 024531 215 EKAVYKKQKEIYKGIFGPRPE 235 (266)
Q Consensus 215 ~~~~~~~~~~~~~k~~~~~~~ 235 (266)
.++..++. ..|.+++...+.
T Consensus 90 ~~~~~~A~-~~~~~~~~~~~~ 109 (125)
T 1na0_A 90 QGDYDEAI-EYYQKALELDPN 109 (125)
T ss_dssp TTCHHHHH-HHHHHHHHHCTT
T ss_pred hcCHHHHH-HHHHHHHHhCCC
Confidence 66665544 446777655443
No 164
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.09 E-value=7.9e-10 Score=82.66 Aligned_cols=107 Identities=21% Similarity=0.140 Sum_probs=90.3
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
+..+...|..++..|++++|+..|.+++.+.+.... ......++.++|.++...|++++|+.++++++.
T Consensus 49 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~-----------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 117 (164)
T 3ro3_A 49 RIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKD-----------RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLA 117 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCC-----------cHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 457788999999999999999999999998765322 112344789999999999999999999999997
Q ss_pred CCC------CchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 024531 163 EDE------NNVKALFRRGKARAELGQTDAAREDFLKAGKFAPE 200 (266)
Q Consensus 163 l~p------~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~ 200 (266)
+.+ ....+++.+|.++..+|++++|...+++++.+...
T Consensus 118 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 118 IAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 632 23578999999999999999999999999987654
No 165
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.07 E-value=1e-10 Score=105.31 Aligned_cols=103 Identities=14% Similarity=0.014 Sum_probs=90.9
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
.+..+..+|..++..|+|++|+..|++++++.|.... +++++|.+|..+|++++|+..+++++
T Consensus 39 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~-----------------~~~~lg~~~~~~g~~~eA~~~~~~al 101 (477)
T 1wao_1 39 NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIK-----------------GYYRRAASNMALGKFRAALRDYETVV 101 (477)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3667788999999999999999999999999998655 69999999999999999999999999
Q ss_pred cCCCCchHHHHHHHHH--HHHcCCHHHHHHHHH-----------HHHhhCCCC
Q 024531 162 GEDENNVKALFRRGKA--RAELGQTDAAREDFL-----------KAGKFAPED 201 (266)
Q Consensus 162 ~l~p~~~~a~~~~g~~--~~~~g~~~~A~~~~~-----------~al~l~p~~ 201 (266)
+++|++..++..++.+ +..+|++++|++.++ +++.++|+.
T Consensus 102 ~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 102 KVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp HHSTTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred HhCCCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 9999999999999999 899999999999999 888888864
No 166
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.07 E-value=1e-10 Score=84.39 Aligned_cols=90 Identities=10% Similarity=0.057 Sum_probs=75.3
Q ss_pred HhhCHHHHHHHHHhHhcC---CCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 024531 146 KLKRYEEAIGQCSLVLGE---DENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQ 222 (266)
Q Consensus 146 ~~~~~~~A~~~~~~al~l---~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~ 222 (266)
.+|++++|+..|++++++ +|+++.+++.+|.++..+|+|++|+..|+++++++|+++.+...++.+....++..++.
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHH
Confidence 468899999999999999 69999999999999999999999999999999999999999999999988888776665
Q ss_pred HHHHhcccCCCCCC
Q 024531 223 KEIYKGIFGPRPEP 236 (266)
Q Consensus 223 ~~~~~k~~~~~~~~ 236 (266)
.. +.+.+...+..
T Consensus 82 ~~-~~~al~~~p~~ 94 (117)
T 3k9i_A 82 EL-LLKIIAETSDD 94 (117)
T ss_dssp HH-HHHHHHHHCCC
T ss_pred HH-HHHHHHhCCCc
Confidence 54 67776654443
No 167
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.06 E-value=1.8e-09 Score=89.94 Aligned_cols=109 Identities=16% Similarity=0.084 Sum_probs=78.4
Q ss_pred HHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCC
Q 024531 85 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED 164 (266)
Q Consensus 85 ~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~ 164 (266)
..+..|..+++.++|++|+..|..++...+.. ....+++++|.++..+|++++|+..|++++...
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~---------------~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKF---------------LAGAAGVAHGVAAANLALFTEAERRLTEANDSP 201 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHH---------------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTST
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcc---------------cHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCC
Confidence 56777777888888888888877665542110 012257788888888888888888888887544
Q ss_pred --CC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q 024531 165 --EN-NVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELR 209 (266)
Q Consensus 165 --p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~ 209 (266)
|. .+.+++++|.|+..+|+.++|...|++++..+|+ +.+...|.
T Consensus 202 ~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~aL~ 248 (282)
T 4f3v_A 202 AGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVAAALK 248 (282)
T ss_dssp TTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHHHHh
Confidence 54 6678888888888888888888888888888887 76665553
No 168
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.04 E-value=5.2e-10 Score=80.87 Aligned_cols=98 Identities=14% Similarity=0.086 Sum_probs=86.8
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-------HHHHHHH
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPED-------KSIAREL 208 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~-------~~~~~~l 208 (266)
++.++|.++...|++++|+..+.+++..+|.++.+++.+|.++..+|++++|+..|++++.++|++ ..+...+
T Consensus 6 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l 85 (131)
T 1elr_A 6 KEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARI 85 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHH
Confidence 588999999999999999999999999999999999999999999999999999999999999887 8888888
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCC
Q 024531 209 RLLAEHEKAVYKKQKEIYKGIFGPRP 234 (266)
Q Consensus 209 ~~l~~~~~~~~~~~~~~~~k~~~~~~ 234 (266)
+.+....++..++. ..|.+++...+
T Consensus 86 a~~~~~~~~~~~A~-~~~~~~~~~~~ 110 (131)
T 1elr_A 86 GNSYFKEEKYKDAI-HFYNKSLAEHR 110 (131)
T ss_dssp HHHHHHTTCHHHHH-HHHHHHHHHCC
T ss_pred HHHHHHhccHHHHH-HHHHHHHHhCC
Confidence 88877777665554 44777776544
No 169
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.04 E-value=5.2e-10 Score=85.02 Aligned_cols=93 Identities=13% Similarity=0.129 Sum_probs=81.7
Q ss_pred HHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCH----------HHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 024531 145 LKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQT----------DAAREDFLKAGKFAPEDKSIARELRLLAEH 214 (266)
Q Consensus 145 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~----------~~A~~~~~~al~l~p~~~~~~~~l~~l~~~ 214 (266)
.+.+.|++|+..++++++++|+++.+++++|.++..++++ ++|+..|++|++++|++.+++..++.++..
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH
Confidence 4677899999999999999999999999999999999876 599999999999999999999999999877
Q ss_pred HH----------HHHHHHHHHHhcccCCCCCCc
Q 024531 215 EK----------AVYKKQKEIYKGIFGPRPEPK 237 (266)
Q Consensus 215 ~~----------~~~~~~~~~~~k~~~~~~~~~ 237 (266)
+. ...++....|++.+...|...
T Consensus 93 lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 93 FAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred hcccCcchhhhhccHHHHHHHHHHHHHhCCCCH
Confidence 65 345566667999998777643
No 170
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.03 E-value=1e-09 Score=95.54 Aligned_cols=140 Identities=16% Similarity=0.071 Sum_probs=104.9
Q ss_pred HHHHHHHHHHhHHHHhhcc-----------------HHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHH
Q 024531 80 IGAADRRKMDGNALFKEEK-----------------LEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAA 142 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~-----------------~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~ 142 (266)
...+..+...|..+...|+ +++|+..|.+++.+.+.... ......++.++|.
T Consensus 163 ~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~-----------~~~~~~~~~~la~ 231 (411)
T 4a1s_A 163 LSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGD-----------RGAQGRACGNLGN 231 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTC-----------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCC-----------HHHHHHHHHHHHH
Confidence 3446677889999999999 99999999999987654211 1113446888999
Q ss_pred HHHHhhCHHHHHHHHHhHhcCCCCchH------HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHH
Q 024531 143 CLLKLKRYEEAIGQCSLVLGEDENNVK------ALFRRGKARAELGQTDAAREDFLKAGKFAPED------KSIARELRL 210 (266)
Q Consensus 143 ~~~~~~~~~~A~~~~~~al~l~p~~~~------a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~------~~~~~~l~~ 210 (266)
++...|++++|+.++++++.+.|.... +++.+|.++..+|++++|+..|++++.+.|.. ..+...++.
T Consensus 232 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~ 311 (411)
T 4a1s_A 232 TYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGN 311 (411)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999999999999999888765444 88889999999999999999999999887754 556666777
Q ss_pred HHHHHHHHHHHHHHHHhcccC
Q 024531 211 LAEHEKAVYKKQKEIYKGIFG 231 (266)
Q Consensus 211 l~~~~~~~~~~~~~~~~k~~~ 231 (266)
+...+++..++.. .+.+.+.
T Consensus 312 ~~~~~g~~~~A~~-~~~~al~ 331 (411)
T 4a1s_A 312 TYTLLHEFNTAIE-YHNRHLA 331 (411)
T ss_dssp HHHHTTCHHHHHH-HHHHHHH
T ss_pred HHHHcCCHHHHHH-HHHHHHH
Confidence 7665555544433 3555543
No 171
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.03 E-value=5.8e-09 Score=95.79 Aligned_cols=147 Identities=9% Similarity=-0.014 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHHhHHHHhhccH-HHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhC-------
Q 024531 78 ERIGAADRRKMDGNALFKEEKL-EEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKR------- 149 (266)
Q Consensus 78 ~~~~~~~~~~~~g~~~~~~g~~-~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~------- 149 (266)
.+++.............+.|++ ++|+..|.++|..+|+... ++++++.++..+++
T Consensus 23 ~k~~~y~~~~~~~~~~~~~~~~~eeal~~~~~~l~~nP~~~t-----------------aW~~R~~~l~~l~~~~~~~~~ 85 (567)
T 1dce_A 23 QKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANPDFAT-----------------LWNCRREVLQHLETEKSPEES 85 (567)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHHHTTSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchhHH-----------------HHHHHHHHHHhcccccchhhh
Confidence 3344344444444455556655 5789999999999999665 69999999999998
Q ss_pred ---HHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcC--CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 024531 150 ---YEEAIGQCSLVLGEDENNVKALFRRGKARAELG--QTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKE 224 (266)
Q Consensus 150 ---~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g--~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~ 224 (266)
+++|+..+++++..+|.+..+|+.++.++..++ +|++|++++.++++++|.|-.++.....+....+...+++-.
T Consensus 86 ~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~ 165 (567)
T 1dce_A 86 AALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELA 165 (567)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHH
T ss_pred hhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHH
Confidence 999999999999999999999999999999999 779999999999999999999999988887666633345556
Q ss_pred HHhcccCCCCCCcccchhH
Q 024531 225 IYKGIFGPRPEPKQKKNWL 243 (266)
Q Consensus 225 ~~~k~~~~~~~~~~~~~~~ 243 (266)
.+.++....+. ..++|.
T Consensus 166 ~~~~~I~~~p~--n~saW~ 182 (567)
T 1dce_A 166 FTDSLITRNFS--NYSSWH 182 (567)
T ss_dssp HHHTTTTTTCC--CHHHHH
T ss_pred HHHHHHHHCCC--CccHHH
Confidence 67777764443 335653
No 172
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.02 E-value=9.4e-09 Score=84.73 Aligned_cols=94 Identities=10% Similarity=0.018 Sum_probs=79.3
Q ss_pred hhhhhhHHHHHHH----hhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHH
Q 024531 134 NPCHLNMAACLLK----LKRYEEAIGQCSLVLGEDENNVKALFRRGKARAE----LGQTDAAREDFLKAGKFAPEDKSIA 205 (266)
Q Consensus 134 ~~~~~n~a~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~g~~~~A~~~~~~al~l~p~~~~~~ 205 (266)
..++.++|.+|.. .+++++|+.+++++++.+ ++.+++++|.+|.. .+++++|+.+|+++++.+ ++.+.
T Consensus 110 ~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~ 185 (273)
T 1ouv_A 110 AEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK--DSPGC 185 (273)
T ss_dssp HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHH
T ss_pred ccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC--CHHHH
Confidence 3478999999999 999999999999999986 68899999999999 999999999999999874 57888
Q ss_pred HHHHHHHHH----HHHHHHHHHHHHhcccCC
Q 024531 206 RELRLLAEH----EKAVYKKQKEIYKGIFGP 232 (266)
Q Consensus 206 ~~l~~l~~~----~~~~~~~~~~~~~k~~~~ 232 (266)
..++.+... .+...++. ..|++....
T Consensus 186 ~~lg~~~~~g~~~~~~~~~A~-~~~~~a~~~ 215 (273)
T 1ouv_A 186 FNAGNMYHHGEGATKNFKEAL-ARYSKACEL 215 (273)
T ss_dssp HHHHHHHHHTCSSCCCHHHHH-HHHHHHHHT
T ss_pred HHHHHHHHcCCCCCccHHHHH-HHHHHHHhC
Confidence 889988776 55555444 457777654
No 173
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.01 E-value=1.7e-09 Score=86.48 Aligned_cols=110 Identities=9% Similarity=-0.028 Sum_probs=69.0
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhh----CHHHHHHHH
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLK----RYEEAIGQC 157 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~----~~~~A~~~~ 157 (266)
.+..+..+|..++..+++++|+..|.++++.... . +++++|.+|.. + ++++|+..+
T Consensus 17 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g~~--~-----------------a~~~lg~~y~~-~g~~~~~~~A~~~~ 76 (212)
T 3rjv_A 17 DRRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDG--D-----------------ALALLAQLKIR-NPQQADYPQARQLA 76 (212)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCH--H-----------------HHHHHHHHTTS-STTSCCHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCH--H-----------------HHHHHHHHHHc-CCCCCCHHHHHHHH
Confidence 3667788999999999999999999999876422 1 35555555555 4 555555555
Q ss_pred HhHhcCCCCchHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCC--CCHHHHHHHHHHHH
Q 024531 158 SLVLGEDENNVKALFRRGKARAE----LGQTDAAREDFLKAGKFAP--EDKSIARELRLLAE 213 (266)
Q Consensus 158 ~~al~l~p~~~~a~~~~g~~~~~----~g~~~~A~~~~~~al~l~p--~~~~~~~~l~~l~~ 213 (266)
++++. +.++.+++++|.+|.. .+++++|+.+|+++.+..| +++.+...|..+..
T Consensus 77 ~~A~~--~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~ 136 (212)
T 3rjv_A 77 EKAVE--AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYA 136 (212)
T ss_dssp HHHHH--TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHH
T ss_pred HHHHH--CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHH
Confidence 55533 3455555555555555 5555555555555555555 23555555555543
No 174
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.01 E-value=3.5e-09 Score=84.64 Aligned_cols=111 Identities=15% Similarity=0.060 Sum_probs=96.0
Q ss_pred HHHHHHHhHHHHhhc----cHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHH----hhCHHHHH
Q 024531 83 ADRRKMDGNALFKEE----KLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK----LKRYEEAI 154 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g----~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~----~~~~~~A~ 154 (266)
+..+..+|..+.. + ++++|+..|.++++.. ... +++++|.+|.. .+++.+|+
T Consensus 50 ~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~g--~~~-----------------a~~~Lg~~y~~g~g~~~d~~~A~ 109 (212)
T 3rjv_A 50 GDALALLAQLKIR-NPQQADYPQARQLAEKAVEAG--SKS-----------------GEIVLARVLVNRQAGATDVAHAI 109 (212)
T ss_dssp HHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHTT--CHH-----------------HHHHHHHHHTCGGGSSCCHHHHH
T ss_pred HHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHCC--CHH-----------------HHHHHHHHHHcCCCCccCHHHHH
Confidence 4567788998888 7 9999999999997643 222 68999999998 88999999
Q ss_pred HHHHhHhcCCC--CchHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 024531 155 GQCSLVLGEDE--NNVKALFRRGKARAE----LGQTDAAREDFLKAGKFAPEDKSIARELRLLAEH 214 (266)
Q Consensus 155 ~~~~~al~l~p--~~~~a~~~~g~~~~~----~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~ 214 (266)
..++++++..| .++.+++++|.+|.. .+++++|+.+|+++.++ |+++.+...|..+...
T Consensus 110 ~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~ 174 (212)
T 3rjv_A 110 TLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQ 174 (212)
T ss_dssp HHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHc
Confidence 99999999998 469999999999999 99999999999999998 7777788888877643
No 175
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.00 E-value=1e-09 Score=95.52 Aligned_cols=102 Identities=16% Similarity=0.114 Sum_probs=90.8
Q ss_pred hhhhhhHHHHHHHhhCHHHHHHHHHhHhc----------------CCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 024531 134 NPCHLNMAACLLKLKRYEEAIGQCSLVLG----------------EDENNVKALFRRGKARAELGQTDAAREDFLKAGKF 197 (266)
Q Consensus 134 ~~~~~n~a~~~~~~~~~~~A~~~~~~al~----------------l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 197 (266)
...+.++|.++++.|+|++|+..|+++++ ++|.+..+++++|.+|..+|+|++|+.+|++++++
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 34588999999999999999999999998 88889999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 024531 198 APEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEP 236 (266)
Q Consensus 198 ~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~~ 236 (266)
+|++..++..++.+...+++..++.. .|++++...+..
T Consensus 303 ~p~~~~a~~~lg~~~~~~g~~~eA~~-~l~~Al~l~P~~ 340 (370)
T 1ihg_A 303 DPSNTKALYRRAQGWQGLKEYDQALA-DLKKAQEIAPED 340 (370)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCTTC
T ss_pred CchhHHHHHHHHHHHHHccCHHHHHH-HHHHHHHhCCCC
Confidence 99999999999999888887766554 478887765543
No 176
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.99 E-value=9.3e-09 Score=91.22 Aligned_cols=119 Identities=13% Similarity=0.044 Sum_probs=91.8
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
.+....+.+...-..|+|++|+..|.++++........+ .......+.|+|.+|..+|+|++|+.+++++|
T Consensus 297 ~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~---------Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL 367 (433)
T 3qww_A 297 YARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDS---------NVYMLHMMYQAMGVCLYMQDWEGALKYGQKII 367 (433)
T ss_dssp HHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTT---------SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChh---------chHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence 344444555555667899999999999998754311100 01134478999999999999999999999999
Q ss_pred cC--------CCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCCHHHHHHHH
Q 024531 162 GE--------DENNVKALFRRGKARAELGQTDAAREDFLKAGKF-----APEDKSIARELR 209 (266)
Q Consensus 162 ~l--------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l-----~p~~~~~~~~l~ 209 (266)
.+ .|+-...++++|.+|..+|+|++|+..|++|+.+ .|+++.+.....
T Consensus 368 ~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~ 428 (433)
T 3qww_A 368 KPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQ 428 (433)
T ss_dssp HHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHH
T ss_pred HHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHH
Confidence 55 4445678999999999999999999999999995 688888776444
No 177
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.98 E-value=3.3e-08 Score=84.41 Aligned_cols=116 Identities=13% Similarity=-0.001 Sum_probs=102.0
Q ss_pred HHHHHHHhHHHHhhcc----------HHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhC--H
Q 024531 83 ADRRKMDGNALFKEEK----------LEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKR--Y 150 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~----------~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~--~ 150 (266)
...+..++..+...+. +.+++..+..++..+|.+.. ++++++.++..++. +
T Consensus 64 ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~-----------------aW~hR~wlL~~l~~~~~ 126 (331)
T 3dss_A 64 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYG-----------------TWHHRCWLLSRLPEPNW 126 (331)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHCSSCCH
T ss_pred HHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHhccCcccH
Confidence 3444555666655544 78999999999999999766 69999999999994 9
Q ss_pred HHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCC-HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 024531 151 EEAIGQCSLVLGEDENNVKALFRRGKARAELGQ-TDAAREDFLKAGKFAPEDKSIARELRLLAEHE 215 (266)
Q Consensus 151 ~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~-~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~ 215 (266)
.+++..|.++++.||.|..||..++.++..+|. ++++++++.++++.+|.|..+......+....
T Consensus 127 ~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l 192 (331)
T 3dss_A 127 ARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 192 (331)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999 69999999999999999999999998887665
No 178
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.97 E-value=1.1e-08 Score=86.57 Aligned_cols=117 Identities=9% Similarity=-0.132 Sum_probs=84.5
Q ss_pred HHHHHHHHHhHHHHhhc--cHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHH----HHh---hCHH
Q 024531 81 GAADRRKMDGNALFKEE--KLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACL----LKL---KRYE 151 (266)
Q Consensus 81 ~~~~~~~~~g~~~~~~g--~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~----~~~---~~~~ 151 (266)
+....+..+|..+...+ ++++++..+..+|..+|.... +.+.++.++ ..+ +++.
T Consensus 65 ~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~-----------------aW~~R~~iL~~~~~~l~~~~~~~ 127 (306)
T 3dra_A 65 SHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQ-----------------IWNYRQLIIGQIMELNNNDFDPY 127 (306)
T ss_dssp TCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCH-----------------HHHHHHHHHHHHHHHTTTCCCTH
T ss_pred HHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHH-----------------HHHHHHHHHHHHHHhccccCCHH
Confidence 44555677888888888 999999999999999998654 466666666 555 5667
Q ss_pred HHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHH--HHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 024531 152 EAIGQCSLVLGEDENNVKALFRRGKARAELGQTD--AAREDFLKAGKFAPEDKSIARELRLLAEH 214 (266)
Q Consensus 152 ~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~--~A~~~~~~al~l~p~~~~~~~~l~~l~~~ 214 (266)
+++..++++++.+|.|..+|+.++.++..+|.++ ++++.+.++++.+|.|-.+......+...
T Consensus 128 ~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~ 192 (306)
T 3dra_A 128 REFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFS 192 (306)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 7777777777777777777777777777777766 77777777777777776666666655443
No 179
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.93 E-value=5.5e-09 Score=88.50 Aligned_cols=132 Identities=9% Similarity=-0.095 Sum_probs=114.5
Q ss_pred HHHHHHhHHH----Hhh---ccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHH--HHH
Q 024531 84 DRRKMDGNAL----FKE---EKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYE--EAI 154 (266)
Q Consensus 84 ~~~~~~g~~~----~~~---g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~--~A~ 154 (266)
..+..++..+ ... +++.+++..+.+++..+|.+.. +..+++.+..+++.++ +++
T Consensus 104 ~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~-----------------aW~~R~~vl~~l~~~~~~~EL 166 (306)
T 3dra_A 104 QIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHH-----------------VWSYRKWLVDTFDLHNDAKEL 166 (306)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHhcccChHHHH
Confidence 3445666666 555 7899999999999999999776 6999999999999998 999
Q ss_pred HHHHhHhcCCCCchHHHHHHHHHHHHcCC------HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 024531 155 GQCSLVLGEDENNVKALFRRGKARAELGQ------TDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKG 228 (266)
Q Consensus 155 ~~~~~al~l~p~~~~a~~~~g~~~~~~g~------~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k 228 (266)
.+++++++.+|.|..||..++.++..++. ++++++++.+++.++|+|..+...+..+....++...+......+
T Consensus 167 ~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~~~~~~~~~~~~ 246 (306)
T 3dra_A 167 SFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDRSITQLEEFSLQ 246 (306)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCCGGGGHHHHHT
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCCChHHHHHHHHH
Confidence 99999999999999999999999999998 999999999999999999999999998877766655555566666
Q ss_pred ccCC
Q 024531 229 IFGP 232 (266)
Q Consensus 229 ~~~~ 232 (266)
++..
T Consensus 247 ~~~~ 250 (306)
T 3dra_A 247 FVDL 250 (306)
T ss_dssp TEEG
T ss_pred HHhc
Confidence 6653
No 180
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.93 E-value=3.1e-08 Score=87.83 Aligned_cols=122 Identities=15% Similarity=0.032 Sum_probs=93.8
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
+.........+..+|+|++|+..|.++++........+ ......++.|+|.+|..+|+|++|+.++.++|.
T Consensus 287 ~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~---------h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~ 357 (429)
T 3qwp_A 287 VQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDI---------NIYQLKVLDCAMDACINLGLLEEALFYGTRTME 357 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTT---------SHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCcc---------chHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 33444555667788999999999999998643211100 011455799999999999999999999999995
Q ss_pred C--------CCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCCHHHHHHHHHHHH
Q 024531 163 E--------DENNVKALFRRGKARAELGQTDAAREDFLKAGKF-----APEDKSIARELRLLAE 213 (266)
Q Consensus 163 l--------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l-----~p~~~~~~~~l~~l~~ 213 (266)
+ .|.-...++++|.+|..+|+|++|+..|++|+.+ .|+++.+...+..+..
T Consensus 358 i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~ 421 (429)
T 3qwp_A 358 PYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEE 421 (429)
T ss_dssp HHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHH
T ss_pred hHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Confidence 5 3444578999999999999999999999999985 6888877766554443
No 181
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=98.92 E-value=1.7e-09 Score=81.44 Aligned_cols=59 Identities=37% Similarity=0.624 Sum_probs=55.0
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeecc
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFD 63 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~~ 63 (266)
+||.+ ++|+||+.+|..|+.||++.|.|+|.++||..|. ++.|||++++.|+++|.++.
T Consensus 84 ~lG~g-~~i~G~e~~l~gm~~Ge~~~v~ipp~~aYG~~g~--~~~Ipp~~~L~f~VeL~~ik 142 (144)
T 3o5e_A 84 SLGKG-QVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGS--LPKIPSNATLFFEIELLDFK 142 (144)
T ss_dssp ETTSS-SSCHHHHHHHTTCCBTCEEEEEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEE
T ss_pred EeCCC-cccHHHHHHHhCCCCCCEEEEEEChHHCcCCCCC--CCCcCCCCeEEEEEEEEEec
Confidence 57887 7999999999999999999999999999999998 57899999999999999874
No 182
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.92 E-value=2.2e-08 Score=85.54 Aligned_cols=140 Identities=14% Similarity=0.006 Sum_probs=117.0
Q ss_pred HHHHHHHHHHhHHHHhhc--cHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhC-HHHHHHH
Q 024531 80 IGAADRRKMDGNALFKEE--KLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKR-YEEAIGQ 156 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g--~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~-~~~A~~~ 156 (266)
++....+..++..+...+ ++.+++..+.++++.+|.+.. ++++++.+....|. +++++.+
T Consensus 105 PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~-----------------AW~~R~~vl~~l~~~~~eel~~ 167 (331)
T 3dss_A 105 PKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFH-----------------CWDYRRFVAAQAAVAPAEELAF 167 (331)
T ss_dssp TTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHhCcCHHHHHHH
Confidence 344556677788887777 499999999999999999766 69999999999998 6999999
Q ss_pred HHhHhcCCCCchHHHHHHHHHHHHc--------------CCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH-------
Q 024531 157 CSLVLGEDENNVKALFRRGKARAEL--------------GQTDAAREDFLKAGKFAPEDKSIARELRLLAEHE------- 215 (266)
Q Consensus 157 ~~~al~l~p~~~~a~~~~g~~~~~~--------------g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~------- 215 (266)
+.+++..+|.|..||..++.++..+ +.++++++++.+++.++|+|..+...+.-+....
T Consensus 168 ~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll~~~~~~~~~~ 247 (331)
T 3dss_A 168 TDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGAGSGRCELS 247 (331)
T ss_dssp HHHHHHHCSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHSSSCGGGCC
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCccccc
Confidence 9999999999999999999999988 5689999999999999999999998666553332
Q ss_pred ---HHHHHHHHHHHhcccCCCCCC
Q 024531 216 ---KAVYKKQKEIYKGIFGPRPEP 236 (266)
Q Consensus 216 ---~~~~~~~~~~~~k~~~~~~~~ 236 (266)
....+++-..+.+++...|++
T Consensus 248 ~~~~~~l~~el~~~~elle~~pd~ 271 (331)
T 3dss_A 248 VEKSTVLQSELESCKELQELEPEN 271 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHHHHHHHHHHHHhhCccc
Confidence 134455666688888777764
No 183
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.92 E-value=6.9e-09 Score=86.47 Aligned_cols=133 Identities=15% Similarity=0.059 Sum_probs=108.6
Q ss_pred HHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcC
Q 024531 84 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE 163 (266)
Q Consensus 84 ~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l 163 (266)
......+..+...|+|++|...|..++...|... +++.+|.++++.++|++|+..++.++..
T Consensus 103 dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~------------------~~~~~a~l~~~~~r~~dA~~~l~~a~~~ 164 (282)
T 4f3v_A 103 AITMGFAACEAAQGNYADAMEALEAAPVAGSEHL------------------VAWMKAVVYGAAERWTDVIDQVKSAGKW 164 (282)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH------------------HHHHHHHHHHHTTCHHHHHHHHTTGGGC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH------------------HHHHHHHHHHHcCCHHHHHHHHHHhhcc
Confidence 3445668888899999999999999998777632 4889999999999999999999999876
Q ss_pred CCCc--hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--CC-CHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 024531 164 DENN--VKALFRRGKARAELGQTDAAREDFLKAGKFA--PE-DKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPE 235 (266)
Q Consensus 164 ~p~~--~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~--p~-~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~ 235 (266)
.+.. ..+++.+|.++..+|++++|+.+|++++.-. |. ..++...++.+...+++..++ ...|++++...|.
T Consensus 165 ~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA-~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 165 PDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAA-VALLEWLQTTHPE 240 (282)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHH-HHHHHHHHHHSCC
T ss_pred CCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHH-HHHHHHHHhcCCc
Confidence 4222 4589999999999999999999999998654 65 667888888887777776544 4558888876665
No 184
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.90 E-value=3.1e-08 Score=85.28 Aligned_cols=129 Identities=7% Similarity=-0.094 Sum_probs=87.8
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
.+..+...|..++..|+++.|+..|.+++.+.+..... .....++.++|.++...|++++|+..+.+++
T Consensus 52 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~-----------~~~~~~~~~la~~~~~~G~~~~A~~~~~~al 120 (373)
T 1hz4_A 52 RIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVW-----------HYALWSLIQQSEILFAQGFLQTAWETQEKAF 120 (373)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH-----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcH-----------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 34556677888888888888888888888876653221 1122346778888888888888888888887
Q ss_pred cCC--------CCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-----HHHHHHHHHHHHHHHHHHHH
Q 024531 162 GED--------ENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPED-----KSIARELRLLAEHEKAVYKK 221 (266)
Q Consensus 162 ~l~--------p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~-----~~~~~~l~~l~~~~~~~~~~ 221 (266)
.+. |....++..+|.++..+|++++|...+++++.+.|.. ..+...+..+....++..++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 193 (373)
T 1hz4_A 121 QLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNA 193 (373)
T ss_dssp HHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHH
Confidence 654 3345667778888888888888888888888877642 23455555555555544433
No 185
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.90 E-value=2.3e-08 Score=90.68 Aligned_cols=135 Identities=7% Similarity=-0.108 Sum_probs=111.1
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
...+...|..+...|++++|...|.+++...|.+.. .++.+.+.++.+.|++++|...|.+|++
T Consensus 321 ~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~----------------~~~~~~~~~~~~~~~~~~A~~~~~~Al~ 384 (530)
T 2ooe_A 321 MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPT----------------LVYIQYMKFARRAEGIKSGRMIFKKARE 384 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCch----------------HHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 445566778888899999999999999999887532 1588999999999999999999999999
Q ss_pred CCCCchHHHHHHHHH-HHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 024531 163 EDENNVKALFRRGKA-RAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRP 234 (266)
Q Consensus 163 l~p~~~~a~~~~g~~-~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~ 234 (266)
..|.+...+...+.+ +...|++++|...|+++++.+|+++.+...+..+....++. .+.+..|.+.+...+
T Consensus 385 ~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~-~~Ar~~~~~al~~~~ 456 (530)
T 2ooe_A 385 DARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNED-NNTRVLFERVLTSGS 456 (530)
T ss_dssp CTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCH-HHHHHHHHHHHHSCC
T ss_pred ccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCH-hhHHHHHHHHHhccC
Confidence 999888877766655 44699999999999999999999999998888876555544 455667888876644
No 186
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.89 E-value=1.7e-08 Score=71.45 Aligned_cols=79 Identities=15% Similarity=0.016 Sum_probs=70.5
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhcCC-------CCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHH
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLGED-------ENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIAREL 208 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~l~-------p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l 208 (266)
-++.+|..++..++|..|+..++.|+... +.....+..+|.|+..+|+++.|+..+++++.++|+++.+...+
T Consensus 7 dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n~ 86 (104)
T 2v5f_A 7 DCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNL 86 (104)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHhhH
Confidence 37799999999999999999999999753 35678899999999999999999999999999999999998888
Q ss_pred HHHHHH
Q 024531 209 RLLAEH 214 (266)
Q Consensus 209 ~~l~~~ 214 (266)
..+...
T Consensus 87 ~~~~~~ 92 (104)
T 2v5f_A 87 KYFEYI 92 (104)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 755443
No 187
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.88 E-value=1.2e-08 Score=70.80 Aligned_cols=67 Identities=13% Similarity=-0.066 Sum_probs=62.2
Q ss_pred hhhhHHHHHHHhhC---HHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q 024531 136 CHLNMAACLLKLKR---YEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK 202 (266)
Q Consensus 136 ~~~n~a~~~~~~~~---~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 202 (266)
++..+|.+++..++ .++|...++++|.+||+++.+++.+|..++..|+|++|+..|++++..+|.++
T Consensus 8 ~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 8 QLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp HHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTC
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 58889999876665 79999999999999999999999999999999999999999999999999853
No 188
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=98.88 E-value=3.7e-09 Score=78.05 Aligned_cols=60 Identities=32% Similarity=0.514 Sum_probs=55.1
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeeccc
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDE 64 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~~~ 64 (266)
+||.+ .+|+||+.+|..|+.||+..|.|+|.++||..|. ++.||+++++.|.++|.++..
T Consensus 68 ~lG~g-~~i~g~e~~l~gm~~Ge~~~v~ip~~~aYG~~~~--~~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 68 HLEQG-EVIKGWDICVSSMRKNEKCLVRIESMYGYGDEGC--GESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp ETTSS-SSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEEC
T ss_pred EeCCC-CcCHHHHHHHhCCCCCCEEEEEEChHHcCCCCCC--CCCcCCCCeEEEEEEEEEEec
Confidence 57887 7999999999999999999999999999999887 567999999999999998764
No 189
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=98.88 E-value=3.3e-09 Score=78.16 Aligned_cols=59 Identities=37% Similarity=0.624 Sum_probs=54.9
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeecc
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFD 63 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~~ 63 (266)
++|.+ ++|+||+.+|..|+.||+..|.|+|.++||..|. ++.||+++++.|+++|.++.
T Consensus 68 ~lG~g-~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~--~~~Ip~~~~l~f~vel~~i~ 126 (128)
T 3o5q_A 68 SLGKG-QVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGS--LPKIPSNATLFFEIELLDFK 126 (128)
T ss_dssp ETTSS-SSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEE
T ss_pred EECCC-CccHHHHHHHhcCCCCCEEEEEEChHHcCCCCCC--CCCcCCCCEEEEEEEEEEec
Confidence 57877 7999999999999999999999999999999998 57899999999999999874
No 190
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=98.87 E-value=2.5e-09 Score=79.45 Aligned_cols=59 Identities=29% Similarity=0.527 Sum_probs=53.2
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeecc
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFD 63 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~~ 63 (266)
+||.+ .+|+||+.+|..|+.||++.|.|+|.++||..+. ++.||+++++.|.|+|.++.
T Consensus 75 ~lG~g-~~i~G~e~aL~gm~~Ge~~~v~ip~~~aYG~~~~--~~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 75 KLGED-ITLWGMELGLLSMRRGELARFLFKPNYAYGTLGC--PPLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp EC-CC-CCCHHHHHHHHTCEETCEEEEEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEC
T ss_pred EcCCc-chhHHHHHHHhCCCCCCEEEEEECHHHCcCCCCC--CCCcCcCCeEEEEEEEEEEe
Confidence 47887 7999999999999999999999999999999887 56799999999999998764
No 191
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=98.87 E-value=2.9e-09 Score=77.45 Aligned_cols=59 Identities=31% Similarity=0.489 Sum_probs=53.0
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeec
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 62 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~ 62 (266)
++|.+ ++|+||+.+|..|+.||+..|.|+|.++||..|.+ ...|||++++.|+++|.++
T Consensus 60 ~lG~~-~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~~-~~~Ip~~~~l~f~veL~~i 118 (119)
T 3kz7_A 60 KVGVG-KVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQP-DAKIPPNTKLIFEVELVDI 118 (119)
T ss_dssp ETTSS-SSCHHHHHHHTTCCTTCEEEEEECGGGTTCTTCBG-GGTBCTTCCEEEEEEEEEE
T ss_pred EECCC-ChhHHHHHHHhCCCCCCEEEEEECcHHhcCCCCCC-CCccCcCCeEEEEEEEEEe
Confidence 47877 79999999999999999999999999999999872 1269999999999999875
No 192
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.87 E-value=2e-08 Score=78.47 Aligned_cols=110 Identities=10% Similarity=-0.034 Sum_probs=88.9
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHh
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 159 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~ 159 (266)
...+..+...|..+...|++++|+..|.+++.+....... ......++.++|.++..+|++++|+.++.+
T Consensus 63 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~----------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 132 (203)
T 3gw4_A 63 TAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPED----------PLAASANAYEVATVALHFGDLAGARQEYEK 132 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC----------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCcc----------HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 3456778899999999999999999999999985422100 011344789999999999999999999999
Q ss_pred HhcCCCC------chHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 024531 160 VLGEDEN------NVKALFRRGKARAELGQTDAAREDFLKAGKFAP 199 (266)
Q Consensus 160 al~l~p~------~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p 199 (266)
++.+.+. ...++..+|.++..+|++++|...+++++.+..
T Consensus 133 al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 133 SLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 9966321 134578999999999999999999999998754
No 193
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.86 E-value=3e-09 Score=75.15 Aligned_cols=61 Identities=34% Similarity=0.557 Sum_probs=55.9
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeecccc
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDET 65 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~~~~ 65 (266)
+||.+ ++++||+.+|..|+.||+..|.++|.++||..+. .+.||+++++.|.+++.++...
T Consensus 39 ~lG~~-~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~--~~~Ip~~~~l~f~v~l~~v~~~ 99 (102)
T 2pbc_A 39 SLGTG-QVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGA--PPKIPGGATLVFEVELLKIERR 99 (102)
T ss_dssp ETTSS-SSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEGGG
T ss_pred EeCCC-CccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCC--CCCcCcCCeEEEEEEEEEeccc
Confidence 57887 7999999999999999999999999999999887 5679999999999999988664
No 194
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=98.86 E-value=4.7e-09 Score=76.23 Aligned_cols=59 Identities=31% Similarity=0.451 Sum_probs=54.1
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeecc
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFD 63 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~~ 63 (266)
+||.+ .+++||+.+|..|+.||+..|.++|.++||..+. ++.||+++++.|.++|.++.
T Consensus 59 ~lG~~-~~i~g~e~~l~gm~~Ge~~~~~ip~~~ayG~~~~--~~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 59 TLGDC-DVIQALDLSVPLMDVGETAMVTADSKYCYGPQGR--SPYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp ETTSS-CSCHHHHHHGGGSCTTCEEEEEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEE
T ss_pred EECCC-ChhHHHHHHHhCCCCCCEEEEEEChHHccCCCCC--CCccCCCCeEEEEEEEEEec
Confidence 57887 7999999999999999999999999999999887 56799999999999998764
No 195
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=98.85 E-value=5e-09 Score=74.71 Aligned_cols=58 Identities=33% Similarity=0.581 Sum_probs=53.3
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeec
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 62 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~ 62 (266)
++|.+ ++++||+.+|..|+.||+..|.++|.++||..+. ++.||+++++.|.+++.++
T Consensus 49 ~lG~~-~~i~g~~~~l~gm~~Ge~~~~~ip~~~ayG~~~~--~~~Ip~~~~l~f~v~l~~v 106 (107)
T 2ppn_A 49 MLGKQ-EVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGH--PGIIPPHATLVFDVELLKL 106 (107)
T ss_dssp ETTSC-CSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEE
T ss_pred EeCCC-ChHHHHHHHHhCCCCCCEEEEEECHHHccCCCCC--CCCcCCCCeEEEEEEEEEe
Confidence 57887 7999999999999999999999999999999887 5579999999999999865
No 196
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=98.85 E-value=5.2e-09 Score=79.59 Aligned_cols=62 Identities=29% Similarity=0.443 Sum_probs=56.4
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCC-CCCCCCCCCCCceEEEEEEeeccccc
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEG-SFSFPNVSPMADLVYEVVLIGFDETK 66 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g-~~~~~~ip~~~~~~~~i~l~~~~~~~ 66 (266)
+||.+ ++|+||+.+|..|+.||+..|.|.|.++||..| . .+.|||++++.|+++|.++....
T Consensus 89 ~lG~g-~vi~G~eeaL~gMk~Ge~~~v~IP~~~aYG~~g~~--~~~IPp~stLiF~VeL~~i~~~~ 151 (157)
T 2jwx_A 89 TLGDC-DVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSR--SPYIPPHAALCLEVTLKTAVDLE 151 (157)
T ss_dssp ETTTT-SSCHHHHHHTTTSCTTCEEEEEECGGGTTTTTCCS--SSCCCTTCCEEEEEEEEEEEECS
T ss_pred EeCCC-ChhHHHHHHHcCCCCCCEEEEEECchhcCCccccc--CCCcCCCCeEEEEEEEEEEEccc
Confidence 57887 799999999999999999999999999999988 4 46799999999999999987654
No 197
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=98.85 E-value=4.6e-09 Score=77.09 Aligned_cols=60 Identities=30% Similarity=0.546 Sum_probs=55.0
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeecccc
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDET 65 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~~~~ 65 (266)
+||.+ ++|+||+.+|..|+.||+..|.|.|.++||..|. +.||+++++.|+++|.++.+.
T Consensus 65 ~lG~~-~~i~G~e~~l~gm~~Ge~~~~~ip~~~aYG~~g~---~~Ip~~~~l~f~vel~~i~~~ 124 (125)
T 4dip_A 65 TLGIL-EALKGWDQGLKGMCVGEKRKLIIPPALGYGKEGK---GKIPPESTLIFNIDLLEIRNG 124 (125)
T ss_dssp ETTSC-SSCHHHHHHSTTCCTTCEEEEEECGGGTTTTTCB---TTBCTTCCEEEEEEEEEEECC
T ss_pred EeCCC-ChhHHHHHHHhCCCCCCEEEEEEChHHhcCCCCC---CCCCCCCeEEEEEEEEEEEcC
Confidence 57887 7999999999999999999999999999999986 489999999999999987653
No 198
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.85 E-value=6.1e-08 Score=83.21 Aligned_cols=126 Identities=13% Similarity=0.039 Sum_probs=106.8
Q ss_pred hHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhh-CHHHHHHHHHhHhcCCCCch
Q 024531 90 GNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLK-RYEEAIGQCSLVLGEDENNV 168 (266)
Q Consensus 90 g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~-~~~~A~~~~~~al~l~p~~~ 168 (266)
.......+...+|+..+.++|.++|+... +.+.++.++..++ .+++++..++.+|..+|.+.
T Consensus 61 r~~~~~~e~se~AL~lt~~~L~~nP~~yt-----------------aWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny 123 (349)
T 3q7a_A 61 RAIAAKEEKSERALELTEIIVRMNPAHYT-----------------VWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSY 123 (349)
T ss_dssp HHHHHTTCCSHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHhCchhHH-----------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcH
Confidence 33444455667899999999999999765 6999999999999 59999999999999999999
Q ss_pred HHHHHHHHHHHHc-C-CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHH-------HHHHHHHhcccCC
Q 024531 169 KALFRRGKARAEL-G-QTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVY-------KKQKEIYKGIFGP 232 (266)
Q Consensus 169 ~a~~~~g~~~~~~-g-~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~-------~~~~~~~~k~~~~ 232 (266)
.+|+.++.++..+ + +++++++.+.++++++|.|-.+.....-+....+... .++-..+.+++..
T Consensus 124 ~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~ 196 (349)
T 3q7a_A 124 QVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRV 196 (349)
T ss_dssp HHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHh
Confidence 9999999999998 8 9999999999999999999999998888777666554 2444456666653
No 199
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=98.84 E-value=5.9e-09 Score=75.11 Aligned_cols=58 Identities=26% Similarity=0.478 Sum_probs=53.3
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeec
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 62 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~ 62 (266)
+||.+ ++++||+.+|..|+.||+..|.++|.++||..+. ++.||+++++.|.+++.++
T Consensus 55 ~lG~~-~~i~g~e~~l~gm~~Ge~~~v~ip~~~ayG~~~~--~~~Ip~~~~l~f~vel~~i 112 (113)
T 1yat_A 55 NIGVG-QVIKGWDVGIPKLSVGEKARLTIPGPYAYGPRGF--PGLIPPNSTLVFDVELLKV 112 (113)
T ss_dssp ETTSS-SSCHHHHHHGGGCCTTCEEEEEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEE
T ss_pred EeCCC-CccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCC--CCCcCCCCeEEEEEEEEEe
Confidence 57887 7999999999999999999999999999999887 5579999999999999865
No 200
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.83 E-value=1.2e-08 Score=71.34 Aligned_cols=70 Identities=13% Similarity=0.090 Sum_probs=63.5
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
....+..+|..++..|+|++|+..|+++++++|+... ++.++|.+|..+|++++|+..+++++
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------a~~~lg~~~~~~g~~~~A~~~~~~al 68 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVG-----------------TYYHLGKLYERLDRTDDAIDTYAQGI 68 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3567889999999999999999999999999998665 69999999999999999999999999
Q ss_pred cCCCCch
Q 024531 162 GEDENNV 168 (266)
Q Consensus 162 ~l~p~~~ 168 (266)
.+.|.+.
T Consensus 69 ~l~~~~~ 75 (100)
T 3ma5_A 69 EVAREEG 75 (100)
T ss_dssp HHHHHHS
T ss_pred hhhhcCC
Confidence 9877543
No 201
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=98.83 E-value=6.7e-09 Score=76.68 Aligned_cols=58 Identities=38% Similarity=0.695 Sum_probs=53.1
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeec
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 62 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~ 62 (266)
+||.+ ++|+||+.+|..|+.||+..|.|+|.++||..+. ++.||+++++.|+++|.++
T Consensus 73 ~lG~g-~vi~G~e~aL~gm~~Ge~~~v~ip~~~aYG~~~~--~~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 73 TLGAG-EVIKGWDQGVATMTLGEKALFTIPYQLAYGERGY--PPVIPPKATLVFEVELLAV 130 (130)
T ss_dssp ETTST-TSCHHHHHHHHHSCTTEEEEEEECTTTSTTTTCC--STTSCSSCCEEEEEEEEEC
T ss_pred EeCCC-CccHHHHHHHhCCCCCCEEEEEECcHHHCCCCCC--CCCcCCCCeEEEEEEEEEC
Confidence 57887 7999999999999999999999999999999887 5579999999999999764
No 202
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=98.81 E-value=7.8e-09 Score=76.88 Aligned_cols=61 Identities=33% Similarity=0.596 Sum_probs=55.8
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeecccc
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDET 65 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~~~~ 65 (266)
+||.+ ++|+||+.+|..|+.||++.|.|+|.++||..|. ++.||+++++.|.+++..+...
T Consensus 63 ~lG~~-~vi~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~--~~~Ip~~~~l~f~v~l~~i~~~ 123 (135)
T 1r9h_A 63 NLGRG-NVIKGWDLGVATMTKGEVAEFTIRSDYGYGDAGS--PPKIPGGATLIFEVELFEWSAE 123 (135)
T ss_dssp ETTTT-SSCHHHHHHHTTCCBTCEEEEEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEEC-
T ss_pred EeCCC-CccHHHHHHHhcCCCCCEEEEEEChHHcCCCCCC--CCCcCcCCcEEEEEEEEEeecC
Confidence 57887 7999999999999999999999999999999887 5789999999999999988654
No 203
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=98.81 E-value=7.1e-09 Score=76.83 Aligned_cols=58 Identities=38% Similarity=0.547 Sum_probs=53.0
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeec
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 62 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~ 62 (266)
+||.+ ++|+||+.+|..|+.||+..|.|+|.++||..+. .+.|||++++.|+++|.++
T Consensus 76 ~lG~g-~vi~G~eeaL~gmk~Ge~~~v~ip~~~aYG~~~~--~~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 76 VLGGG-MVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGA--GGVIPPNATLVFEVELLDV 133 (133)
T ss_dssp ETTSS-SSCHHHHHHSTTCBTTCEEEEEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEC
T ss_pred EeCCC-ChhHHHHHHHcCCCCCCEEEEEECcHHhCCCCCC--CCCCCCCCeEEEEEEEEEC
Confidence 57888 7999999999999999999999999999999887 4579999999999999763
No 204
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.81 E-value=1.2e-07 Score=68.87 Aligned_cols=103 Identities=14% Similarity=0.115 Sum_probs=84.3
Q ss_pred hccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHH---HHHHHHhHhcCC-C-CchHH
Q 024531 96 EEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEE---AIGQCSLVLGED-E-NNVKA 170 (266)
Q Consensus 96 ~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~---A~~~~~~al~l~-p-~~~~a 170 (266)
......+.+.|.+.+...+.... +.+++|.++.+...... ++..+...+..+ | ..-++
T Consensus 14 ~~~l~~~~~~y~~e~~~~~~s~~-----------------~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~ 76 (126)
T 1nzn_A 14 VEDLLKFEKKFQSEKAAGSVSKS-----------------TQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDY 76 (126)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCHH-----------------HHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCcHH-----------------HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHH
Confidence 34456667777777765544332 58899999999887666 999999999987 5 57789
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 024531 171 LFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHE 215 (266)
Q Consensus 171 ~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~ 215 (266)
+|.+|..++++|+|++|..+++.+|+.+|+|..+......+..+.
T Consensus 77 lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~~i 121 (126)
T 1nzn_A 77 VFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAM 121 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988776665443
No 205
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.80 E-value=6e-08 Score=83.26 Aligned_cols=144 Identities=8% Similarity=-0.076 Sum_probs=117.7
Q ss_pred HHHHHHHHHhHHHHhhc-cHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHh-h-CHHHHHHHH
Q 024531 81 GAADRRKMDGNALFKEE-KLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKL-K-RYEEAIGQC 157 (266)
Q Consensus 81 ~~~~~~~~~g~~~~~~g-~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~-~-~~~~A~~~~ 157 (266)
+....+..+|..+...| .+++++..+..+|..+|.... +.+.++.++..+ + ++++++..+
T Consensus 86 ~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~-----------------aW~hR~wlL~~l~~~~~~~EL~~~ 148 (349)
T 3q7a_A 86 AHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQ-----------------VWHHRLLLLDRISPQDPVSEIEYI 148 (349)
T ss_dssp TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHH-----------------HHHHHHHHHHHHCCSCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHH-----------------HHHHHHHHHHHhcCCChHHHHHHH
Confidence 34455677888888888 599999999999999999766 699999999998 8 899999999
Q ss_pred HhHhcCCCCchHHHHHHHHHHHHcCCHH--------HHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH------HHHHHH
Q 024531 158 SLVLGEDENNVKALFRRGKARAELGQTD--------AAREDFLKAGKFAPEDKSIARELRLLAEHEKA------VYKKQK 223 (266)
Q Consensus 158 ~~al~l~p~~~~a~~~~g~~~~~~g~~~--------~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~------~~~~~~ 223 (266)
++++..+|.|..+|+.++.++..+|.++ ++++++.++++.+|.|-.+......+...... .-+++-
T Consensus 149 ~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~~~~~~~~~~eEL 228 (349)
T 3q7a_A 149 HGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPGAETSSRSLQDEL 228 (349)
T ss_dssp HHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTTCCCCHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccccchHHHHHHH
Confidence 9999999999999999999999999988 99999999999999999999998887655432 123344
Q ss_pred HHHhcccCCCCCCcccchhH
Q 024531 224 EIYKGIFGPRPEPKQKKNWL 243 (266)
Q Consensus 224 ~~~~k~~~~~~~~~~~~~~~ 243 (266)
..+.+++.. .+...++|.
T Consensus 229 e~~~~aI~~--~P~n~SaW~ 246 (349)
T 3q7a_A 229 IYILKSIHL--IPHNVSAWN 246 (349)
T ss_dssp HHHHHHHHH--CTTCHHHHH
T ss_pred HHHHHHHHh--CCCCHHHHH
Confidence 445555533 333345663
No 206
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.79 E-value=4.3e-08 Score=69.31 Aligned_cols=83 Identities=12% Similarity=0.006 Sum_probs=69.0
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
+......|..+|..++|..|+..|..|+...+..... ..-...++.++|.|+.++|+++.|+.++++++.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~----------~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEIS----------TIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLE 74 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCC----------SSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCC----------cccHHHHHHHHHHHHHHccCHHHHHHHHHHHHh
Confidence 4566799999999999999999999999986432110 000234689999999999999999999999999
Q ss_pred CCCCchHHHHHHH
Q 024531 163 EDENNVKALFRRG 175 (266)
Q Consensus 163 l~p~~~~a~~~~g 175 (266)
++|++..+..+++
T Consensus 75 l~P~~~~~~~n~~ 87 (104)
T 2v5f_A 75 LDPEHQRANGNLK 87 (104)
T ss_dssp HCTTCHHHHHHHH
T ss_pred cCCCCHHHHhhHH
Confidence 9999999988876
No 207
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.77 E-value=4.8e-08 Score=69.70 Aligned_cols=82 Identities=18% Similarity=0.132 Sum_probs=71.9
Q ss_pred HHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 024531 152 EAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFG 231 (266)
Q Consensus 152 ~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~ 231 (266)
.|+..++++++.+|+++.+++.+|.++..+|++++|+..|++++.++|++..++..++.+....++..++.. .|.+.+.
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~-~~~~al~ 81 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQ-AWESGLA 81 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHH-HHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999887777665544 4677665
Q ss_pred CCC
Q 024531 232 PRP 234 (266)
Q Consensus 232 ~~~ 234 (266)
..+
T Consensus 82 ~~~ 84 (115)
T 2kat_A 82 AAQ 84 (115)
T ss_dssp HHH
T ss_pred hcc
Confidence 433
No 208
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.75 E-value=2.2e-07 Score=84.12 Aligned_cols=118 Identities=12% Similarity=0.070 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHH-------hhCHH-------HHHHHHHhHhc-CC
Q 024531 100 EEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK-------LKRYE-------EAIGQCSLVLG-ED 164 (266)
Q Consensus 100 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~-------~~~~~-------~A~~~~~~al~-l~ 164 (266)
..|+..|.+++..+|.... ++.++|..+.. .|+++ +|+..+++|+. ++
T Consensus 255 ~~a~~~y~~al~~~p~~~~-----------------~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~ 317 (530)
T 2ooe_A 255 KRVMFAYEQCLLVLGHHPD-----------------IWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLL 317 (530)
T ss_dssp HHHHHHHHHHHHHHTTCHH-----------------HHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhC
Confidence 4788899999999998665 68899998886 78876 99999999997 89
Q ss_pred CCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 024531 165 ENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK-SIARELRLLAEHEKAVYKKQKEIYKGIFGPRPE 235 (266)
Q Consensus 165 p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~-~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~ 235 (266)
|++...++.+|.++...|++++|...|+++++++|.++ .++..+..+..+.+... +.+..|.+.+..++.
T Consensus 318 p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~-~A~~~~~~Al~~~~~ 388 (530)
T 2ooe_A 318 KKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIK-SGRMIFKKAREDART 388 (530)
T ss_dssp SSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHTCTTC
T ss_pred cccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHH-HHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999986 57777777766666554 456678888876543
No 209
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=98.74 E-value=5.7e-08 Score=74.65 Aligned_cols=67 Identities=24% Similarity=0.396 Sum_probs=57.7
Q ss_pred ccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeeccccccCCCCCCCCHHHHHH
Q 024531 8 KEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTVEERIG 81 (266)
Q Consensus 8 ~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~ 81 (266)
++|+||+.+|..|+.|++..|.|+|.++||..|. ++.|||++++.|.|+|.++.+. .+.++.++..+
T Consensus 89 ~vI~G~eeaL~gMk~Ge~~~~~Ip~~laYG~~g~--~~~Ipp~s~LiF~VeL~~i~~~-----~~~~~~~e~~~ 155 (167)
T 1jvw_A 89 EVIKGWTEALQLMREGDRWRLFIPYDLAYGVTGG--GGMIPPYSPLEFDVELISIKDG-----GKGRTAEEVDE 155 (167)
T ss_dssp GSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCS--SSSSCTTCCEEEEEEEEEEGGG-----CCSCBHHHHHH
T ss_pred chhHHHHHHHcCCCCCCEEEEEECchhhCCCCCC--CCCcCCCCeEEEEEEEEEEEcC-----CCCCCHHHHHH
Confidence 6999999999999999999999999999999987 5689999999999999999754 34455555433
No 210
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=98.72 E-value=8.6e-09 Score=78.74 Aligned_cols=66 Identities=14% Similarity=0.126 Sum_probs=51.7
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCC-----------CCCCCCC------------------------C
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGK-----------EGSFSFP------------------------N 46 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~-----------~g~~~~~------------------------~ 46 (266)
+||.+ +||+|||.+|.+|+.||++.|+|+|.++||. .|..++. .
T Consensus 62 ~lG~g-~vI~Gwd~gl~~M~~Ge~~~~~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~l 140 (165)
T 2lkn_A 62 IIGKK-FKLPVWETIVCTMREGEIAQFLCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDAL 140 (165)
T ss_dssp ESSSS-CSCSHHHHHHTTCCTTCEEEEECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTHH
T ss_pred EecCC-CccHHHHHHHhcCccCceEEEEECHHHhcCCcchhhhhhhccccCCCccccccceeeeeccccccccccccccc
Confidence 58988 8999999999999999999999999999982 1111000 0
Q ss_pred CCCCCceEEEEEEeeccccccC
Q 024531 47 VSPMADLVYEVVLIGFDETKEG 68 (266)
Q Consensus 47 ip~~~~~~~~i~l~~~~~~~~~ 68 (266)
++++++++|+|+|+++..+.++
T Consensus 141 i~~p~~L~FeIELl~Ve~P~ey 162 (165)
T 2lkn_A 141 QQNPQPLIFHMEMLKVESPGTY 162 (165)
T ss_dssp HHSCCCCEEEEEEEEEECTTTC
T ss_pred cCCCCCeEEEEEEEEEcCCccc
Confidence 2344789999999999887653
No 211
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.72 E-value=1.1e-08 Score=75.97 Aligned_cols=63 Identities=29% Similarity=0.447 Sum_probs=57.0
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCC-CCCCCCCCCCCceEEEEEEeecccccc
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEG-SFSFPNVSPMADLVYEVVLIGFDETKE 67 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g-~~~~~~ip~~~~~~~~i~l~~~~~~~~ 67 (266)
+||.+ .+|+||+.+|..|+.||+..|.|+|.++||..+ . .+.||+++++.|.++|.++....+
T Consensus 63 ~lG~g-~~i~G~e~~L~gm~~Ge~~~v~ip~~~aYG~~~~~--~~~Ip~~~~l~f~vel~~v~~~~~ 126 (135)
T 2d9f_A 63 TLGDC-DVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSR--SPYIPPHAALCLEVTLKTAVDRPD 126 (135)
T ss_dssp ETTSC-CSCTTTTTTGGGSCTTCEEEEEECHHHHTCTTCCS--SSCCCTTCCEEEEEEEEEEESSCS
T ss_pred EeCCC-ChhHHHHHHHhCCCCCCEEEEEEChhHccCcCCcC--CCccCCCCeEEEEEEEEEeecCCc
Confidence 57887 799999999999999999999999999999988 4 457999999999999999877654
No 212
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.69 E-value=1.9e-07 Score=80.27 Aligned_cols=146 Identities=10% Similarity=0.001 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHH
Q 024531 77 EERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQ 156 (266)
Q Consensus 77 ~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~ 156 (266)
....-.+..+...|..++..|++++|+..+.+++...|.... .....++.++|.++...|++++|+..
T Consensus 8 ~~~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~------------~~~~~~~~~l~~~~~~~g~~~~A~~~ 75 (373)
T 1hz4_A 8 REDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWF------------YSRIVATSVLGEVLHCKGELTRSLAL 75 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCH------------HHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCch------------hHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 334445667788899999999999999999999998875321 11334688999999999999999999
Q ss_pred HHhHhcCCCCc------hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC--------CCHHHHHHHHHHHHHHHHHHHHH
Q 024531 157 CSLVLGEDENN------VKALFRRGKARAELGQTDAAREDFLKAGKFAP--------EDKSIARELRLLAEHEKAVYKKQ 222 (266)
Q Consensus 157 ~~~al~l~p~~------~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p--------~~~~~~~~l~~l~~~~~~~~~~~ 222 (266)
+.+++.+.|.. ..+++.+|.++..+|++++|+..|++++.+.+ ....+...+..+....++..++.
T Consensus 76 ~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 155 (373)
T 1hz4_A 76 MQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAE 155 (373)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHH
Confidence 99999876543 24578999999999999999999999999863 33455566777766666555444
Q ss_pred HHHHhcccCCCCC
Q 024531 223 KEIYKGIFGPRPE 235 (266)
Q Consensus 223 ~~~~~k~~~~~~~ 235 (266)
. .+.+.+...+.
T Consensus 156 ~-~~~~al~~~~~ 167 (373)
T 1hz4_A 156 A-SARSGIEVLSS 167 (373)
T ss_dssp H-HHHHHHHHTTT
T ss_pred H-HHHHHHHHhhc
Confidence 3 45665544443
No 213
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.69 E-value=1.9e-07 Score=69.42 Aligned_cols=97 Identities=13% Similarity=0.001 Sum_probs=73.0
Q ss_pred HhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHH----hhCHHHHHHHHHhHhcCC
Q 024531 89 DGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK----LKRYEEAIGQCSLVLGED 164 (266)
Q Consensus 89 ~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~----~~~~~~A~~~~~~al~l~ 164 (266)
.|..+...+.+++|+..|.++.+... . .+++++|.+|.. .+++.+|+..++++.+.
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~g~--~-----------------~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~- 90 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACELNS--G-----------------NGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL- 90 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHTTC--H-----------------HHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT-
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcCCC--H-----------------HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC-
Confidence 66677777777778888888877631 1 257888888887 77888888888888876
Q ss_pred CCchHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHH
Q 024531 165 ENNVKALFRRGKARAE----LGQTDAAREDFLKAGKFAPEDKSIAREL 208 (266)
Q Consensus 165 p~~~~a~~~~g~~~~~----~g~~~~A~~~~~~al~l~p~~~~~~~~l 208 (266)
.++.+++++|.+|.. .+++++|+.+|+++.+. .++.+...|
T Consensus 91 -g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~A~~~l 135 (138)
T 1klx_A 91 -NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL--GSEDACGIL 135 (138)
T ss_dssp -TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHC
T ss_pred -CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC--CCHHHHHHH
Confidence 578888888888888 88888888888888876 345554444
No 214
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.66 E-value=3.2e-07 Score=82.28 Aligned_cols=129 Identities=15% Similarity=0.037 Sum_probs=90.1
Q ss_pred HHHHHHHhHHHHhh-----ccHHHHHHHHHHHHhhhccchhhhh------ch---hHHHH-------HHHhhhhhhhhHH
Q 024531 83 ADRRKMDGNALFKE-----EKLEEAMQQYEMAIAYMGDDFMFQL------FG---KYRDM-------ALAVKNPCHLNMA 141 (266)
Q Consensus 83 ~~~~~~~g~~~~~~-----g~~~~A~~~y~~al~~~~~~~~~~~------~~---~~~~~-------~~~l~~~~~~n~a 141 (266)
...+...|..+... +++++|+..|.++++..+....... .+ ...+- ...-...+++++|
T Consensus 291 ~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~~~~~a~~~Lg 370 (490)
T 2xm6_A 291 SDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQGDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAKGEKAAQFNLG 370 (490)
T ss_dssp HHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 45566677777666 6777777777777765433221100 00 00000 0011244788899
Q ss_pred HHHHH----hhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCC---CHHHHHHHHH
Q 024531 142 ACLLK----LKRYEEAIGQCSLVLGEDENNVKALFRRGKARAE----LGQTDAAREDFLKAGKFAPE---DKSIARELRL 210 (266)
Q Consensus 142 ~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~g~~~~A~~~~~~al~l~p~---~~~~~~~l~~ 210 (266)
.+|.. .+++++|+..|+++++.. ++.+++++|.+|.. .+++++|..+|+++++.+|+ ++.+...+..
T Consensus 371 ~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~~a~~~l~~ 448 (490)
T 2xm6_A 371 NALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGTENRNITEKK 448 (490)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHTT
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCCCcCCHHHHHHHHh
Confidence 99988 789999999999998864 68899999999998 89999999999999999854 7888877776
Q ss_pred HHH
Q 024531 211 LAE 213 (266)
Q Consensus 211 l~~ 213 (266)
+..
T Consensus 449 ~~~ 451 (490)
T 2xm6_A 449 LTA 451 (490)
T ss_dssp SCH
T ss_pred cCH
Confidence 644
No 215
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=98.63 E-value=4.6e-08 Score=84.64 Aligned_cols=62 Identities=31% Similarity=0.441 Sum_probs=55.9
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCC---CCCCCCCceEEEEEEeeccc
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSF---PNVSPMADLVYEVVLIGFDE 64 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~---~~ip~~~~~~~~i~l~~~~~ 64 (266)
++|++ ++|+||+.+|.+|++||++.|+|.|.|+||..|+++. +.||+++.+.|+++|.++..
T Consensus 172 ~~g~~-~v~~gl~~~l~~m~~GE~~~~~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~ 236 (356)
T 3jxv_A 172 TVKDG-HLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKT 236 (356)
T ss_dssp EGGGC-SSSHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEEC
T ss_pred EeCCC-CcchHHHHHHhhCCCCCEEEEEEChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEec
Confidence 47888 7999999999999999999999999999999998542 36999999999999999865
No 216
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=98.57 E-value=9.2e-08 Score=76.43 Aligned_cols=54 Identities=26% Similarity=0.453 Sum_probs=50.5
Q ss_pred ccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeecc
Q 024531 8 KEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFD 63 (266)
Q Consensus 8 ~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~~ 63 (266)
++|+||+.+|..|+.|++..|.|+|.++||..|. .+.|||+++++|+|+|+++.
T Consensus 165 ~vI~G~eeaL~gMk~Gek~~v~IPp~lAYG~~g~--~~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 165 SVISGWTSALQNMPTGAKWRLVIPSDQAYGAEGA--GDLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp GSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEE
T ss_pred chhHHHHHHHhCCCCCCEEEEEECchhcCCCCCC--CCCCCCCCeEEEEEEEEEEe
Confidence 6899999999999999999999999999999998 55799999999999999864
No 217
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.56 E-value=1.2e-06 Score=78.15 Aligned_cols=107 Identities=11% Similarity=-0.029 Sum_probs=72.3
Q ss_pred HHHHHhHHHHhhc---cHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHh----hCHHHHHHHH
Q 024531 85 RRKMDGNALFKEE---KLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKL----KRYEEAIGQC 157 (266)
Q Consensus 85 ~~~~~g~~~~~~g---~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~----~~~~~A~~~~ 157 (266)
.+..+|..+...| ++.+|+..|.++++..+.... .++++|.+|... +++++|+..|
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~-----------------~~~~Lg~~y~~g~~~~~d~~~A~~~~ 240 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQ-----------------RVDSVARVLGDATLGTPDEKTAQALL 240 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHH-----------------HHHHHHHHHTCGGGSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHH-----------------HHHHHHHHHhCCCCCCCCHHHHHHHH
Confidence 4567888888888 999999999999998877544 245666666544 4666666666
Q ss_pred HhHhcCCCCchHHHHHHHHH-H--HHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 024531 158 SLVLGEDENNVKALFRRGKA-R--AELGQTDAAREDFLKAGKFAPEDKSIARELRLLAE 213 (266)
Q Consensus 158 ~~al~l~p~~~~a~~~~g~~-~--~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~ 213 (266)
+++. |.++.+++++|.+ + ...+++++|+.+|+++.+ ++++.+...|+.+..
T Consensus 241 ~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~--~g~~~A~~~Lg~~y~ 294 (452)
T 3e4b_A 241 EKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRA--ADQPRAELLLGKLYY 294 (452)
T ss_dssp HHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHH--TTCHHHHHHHHHHHH
T ss_pred HHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHH
Confidence 6665 5666666666666 3 355666666666666654 335666666665543
No 218
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.55 E-value=4e-07 Score=79.67 Aligned_cols=136 Identities=8% Similarity=-0.072 Sum_probs=88.0
Q ss_pred HHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCC
Q 024531 85 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED 164 (266)
Q Consensus 85 ~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~ 164 (266)
...++|..+++.|+|.+|++.|.++++..|.....................++.++|.+|...|+|++|+.++.+++...
T Consensus 6 ~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~ 85 (434)
T 4b4t_Q 6 SKLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYM 85 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 34577888999999999999999999998864332111100000111122356777777777777777777776665432
Q ss_pred C----------------------------------------------CchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 024531 165 E----------------------------------------------NNVKALFRRGKARAELGQTDAAREDFLKAGKFA 198 (266)
Q Consensus 165 p----------------------------------------------~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~ 198 (266)
+ .....+.++|.+|..+|+|++|...++.++...
T Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~ 165 (434)
T 4b4t_Q 86 MQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREF 165 (434)
T ss_dssp HTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHH
Confidence 2 124467788888889999999998888887752
Q ss_pred ------CCCHHHHHHHHHHHHHHHHHHH
Q 024531 199 ------PEDKSIARELRLLAEHEKAVYK 220 (266)
Q Consensus 199 ------p~~~~~~~~l~~l~~~~~~~~~ 220 (266)
|...++...+..+...++...+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (434)
T 4b4t_Q 166 KKLDDKPSLVDVHLLESKVYHKLRNLAK 193 (434)
T ss_dssp TTSSCSTHHHHHHHHHHHHHHHTTCHHH
T ss_pred HhcccchhHHHHHHHHHHHHHHhCcHHH
Confidence 2234555556666555554443
No 219
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.53 E-value=2.8e-07 Score=82.99 Aligned_cols=109 Identities=10% Similarity=-0.045 Sum_probs=88.7
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhc-----cchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHH
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMG-----DDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAI 154 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~ 154 (266)
+..+..+.++|..+...|+|++|+..|.++|.... +.+. ....++|+|.+|..+|+|++|+
T Consensus 348 p~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~--------------~a~~l~nLa~~~~~~G~~~eA~ 413 (490)
T 3n71_A 348 LYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQ--------------LGMAVMRAGLTNWHAGHIEVGH 413 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHH--------------HHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHH--------------HHHHHHHHHHHHHHCCCHHHHH
Confidence 45677788899999999999999999999998753 2221 3446999999999999999999
Q ss_pred HHHHhHhcC-----CCCc---hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q 024531 155 GQCSLVLGE-----DENN---VKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK 202 (266)
Q Consensus 155 ~~~~~al~l-----~p~~---~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 202 (266)
..+++|+++ -|++ .+..-.++.++..++.|++|...|+++.+..-+|.
T Consensus 414 ~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~~~~~ 469 (490)
T 3n71_A 414 GMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAALNNQ 469 (490)
T ss_dssp HHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999954 3444 45677899999999999999999999876443333
No 220
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=98.52 E-value=1.4e-07 Score=78.80 Aligned_cols=60 Identities=37% Similarity=0.580 Sum_probs=55.7
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeeccc
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDE 64 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~~~ 64 (266)
+||.+ .+|+||+.+|..|+.||++.|.|+|.++||..|. ++.||+++++.|.+++..+..
T Consensus 100 ~lG~g-~vi~G~e~aL~gm~~Ge~~~v~ipp~~aYG~~g~--~~~Ip~~~~lvf~Vel~~i~~ 159 (280)
T 1q1c_A 100 DLGKG-EVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGS--PPKIPPNATLVFEVELFEFKG 159 (280)
T ss_dssp ETTTT-SSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEEC
T ss_pred EECCc-ChhHHHHHHHhcCCCCCEEEEEECcHHhCCCcCc--cCCCCCCCcEEEEEEeeeecc
Confidence 57888 7999999999999999999999999999999997 678999999999999998865
No 221
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.50 E-value=3.8e-07 Score=75.64 Aligned_cols=89 Identities=12% Similarity=-0.001 Sum_probs=78.6
Q ss_pred cHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHh-----hCHHHHHHHHHhHhcCCCCc-hHHH
Q 024531 98 KLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKL-----KRYEEAIGQCSLVLGEDENN-VKAL 171 (266)
Q Consensus 98 ~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~-----~~~~~A~~~~~~al~l~p~~-~~a~ 171 (266)
....|...++++++++|... ...+|..+|..|.+. |+.++|..+|++||+++|+. +.++
T Consensus 178 ~l~~A~a~lerAleLDP~~~---------------~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~ 242 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQ---------------EGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHH 242 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHH---------------HHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHH
T ss_pred hHHHHHHHHHHHHHhCCCcc---------------cCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHH
Confidence 47889999999999999832 122699999999995 99999999999999999975 9999
Q ss_pred HHHHHHHHH-cCCHHHHHHHHHHHHhhCCCC
Q 024531 172 FRRGKARAE-LGQTDAAREDFLKAGKFAPED 201 (266)
Q Consensus 172 ~~~g~~~~~-~g~~~~A~~~~~~al~l~p~~ 201 (266)
+..|..+.. +|++++|.+.+++++..+|..
T Consensus 243 v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 243 ITYADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 999999988 599999999999999998873
No 222
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=98.47 E-value=2.5e-07 Score=73.77 Aligned_cols=53 Identities=36% Similarity=0.540 Sum_probs=49.2
Q ss_pred ccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeec
Q 024531 8 KEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 62 (266)
Q Consensus 8 ~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~ 62 (266)
++|+||+.+|..|+.||+..|.|+|.++||..|. .+.|||++++.|+++|.++
T Consensus 157 ~vi~G~eeaL~gM~~Ge~~~v~Ipp~~aYG~~g~--~~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 157 MVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGA--AGVIPPNATLVFEVELLDV 209 (209)
T ss_dssp SSCHHHHHHHTTCBTTCEEEEEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEC
T ss_pred ccchhHHHHHhCCCCCCEEEEEECcHHhCCCCCC--CCCcCCCCeEEEEEEEEEC
Confidence 5899999999999999999999999999999998 5569999999999999863
No 223
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=98.47 E-value=2.9e-07 Score=73.47 Aligned_cols=55 Identities=22% Similarity=0.334 Sum_probs=51.2
Q ss_pred ccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeeccc
Q 024531 8 KEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDE 64 (266)
Q Consensus 8 ~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~~~ 64 (266)
.+|+||+.+|..|+.|++..|.|+|.++||..|. ++.|||+++++|+|+|.++.+
T Consensus 157 ~vI~G~eeaL~gMk~Gek~~v~IP~~laYG~~g~--~~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 157 QVIPGWTEALQLMPAGSTWEIYVPSGLAYGPRSV--GGPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp GSCHHHHHHHTTCCTTCEEEEEECGGGTTTTCCC--SSSCCTTCCEEEEEEEEEEEC
T ss_pred chhhHHHHHHcCCCCCCEEEEEECchhccCccCC--CCCCCCCCeEEEEEEEEEEEc
Confidence 6899999999999999999999999999999886 568999999999999998754
No 224
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.46 E-value=2e-06 Score=63.73 Aligned_cols=94 Identities=14% Similarity=-0.035 Sum_probs=82.3
Q ss_pred hccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHH
Q 024531 96 EEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRG 175 (266)
Q Consensus 96 ~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 175 (266)
.+++++|+..|.++.+..+.. +. +|.+|...+..++|+..++++.+. .++.+++++|
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~~-------------------a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg 64 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEMF-------------------GC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLG 64 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCTT-------------------HH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCHh-------------------hh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHH
Confidence 367999999999999876332 34 999999999999999999999987 6899999999
Q ss_pred HHHHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 024531 176 KARAE----LGQTDAAREDFLKAGKFAPEDKSIARELRLLAEH 214 (266)
Q Consensus 176 ~~~~~----~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~ 214 (266)
.+|.. .+++++|+.+|+++.+. +++.+...|..+...
T Consensus 65 ~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 65 DFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 99999 89999999999999986 678888889988654
No 225
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.45 E-value=3.3e-06 Score=75.66 Aligned_cols=28 Identities=14% Similarity=0.114 Sum_probs=14.6
Q ss_pred HHHHHhHHHHh----hccHHHHHHHHHHHHhh
Q 024531 85 RRKMDGNALFK----EEKLEEAMQQYEMAIAY 112 (266)
Q Consensus 85 ~~~~~g~~~~~----~g~~~~A~~~y~~al~~ 112 (266)
.+..+|..++. .+++++|+..|.++++.
T Consensus 77 a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~ 108 (490)
T 2xm6_A 77 AEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK 108 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 34445555555 55555555555555543
No 226
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=98.44 E-value=1.3e-07 Score=69.62 Aligned_cols=60 Identities=25% Similarity=0.418 Sum_probs=52.2
Q ss_pred ccCCCCccchhHHHHhhc------CCCCcEEEEEEecCcccCCCCCC---CCCCCCCCCceEEEEEEeec
Q 024531 2 VLGKEKKEMTGLAIGVSS------MKAGEHALLHVGWELGYGKEGSF---SFPNVSPMADLVYEVVLIGF 62 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~------m~~gE~~~~~i~~~~~~~~~g~~---~~~~ip~~~~~~~~i~l~~~ 62 (266)
+||.+ .+|+||+.+|.. |+.||+..|.|+|.++||..+.. ..+.||+++++.|.++|.++
T Consensus 60 ~lG~~-~~i~G~~~~L~G~~~~~~m~~Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 60 RIGVG-EVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp ETTSS-SSCHHHHHHHHCBTTBCCCBTTCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred EeCCC-CccHHHHHHhcccccccccCCCCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 57887 799999999976 99999999999999999998852 12479999999999999864
No 227
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=98.43 E-value=2.4e-07 Score=77.27 Aligned_cols=64 Identities=28% Similarity=0.503 Sum_probs=56.1
Q ss_pred ccCCCC--ccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCC-CCCCCCceEEEEEEeecccccc
Q 024531 2 VLGKEK--KEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFP-NVSPMADLVYEVVLIGFDETKE 67 (266)
Q Consensus 2 ~lg~~~--~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~-~ip~~~~~~~~i~l~~~~~~~~ 67 (266)
+||.+. ++|+||+.+|..|+.||.+.|+|+|.++||..|. ++ .||+++++.|.++|.++.+..+
T Consensus 211 ~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v~ip~~~~yG~~~~--~~~~IP~~~~l~f~V~L~~i~~~~~ 277 (280)
T 1q1c_A 211 EIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGK--EKFQIPPNAELKYELHLKSFEKAKE 277 (280)
T ss_dssp ETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCB--GGGTBCTTCCEEEEEEEEEEECCCC
T ss_pred EecCCcccccchhHHHHHhCCCCCcEEEEEEChhHcCCcCCC--ccCccCCCCeEEEEEEEEEEeCCCC
Confidence 578772 2699999999999999999999999999998886 23 5999999999999999988766
No 228
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=98.42 E-value=1.9e-07 Score=80.68 Aligned_cols=62 Identities=34% Similarity=0.447 Sum_probs=56.0
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeeccc
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDE 64 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~~~ 64 (266)
++|.+ ++|+||+.+|..|+.||+..|+|+|.++||..+....+.||+++++.|+++|.++.+
T Consensus 294 ~~G~g-~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~~~~~~~~Ip~~~~l~f~vel~~~~~ 355 (356)
T 3jxv_A 294 KTDEE-AVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVSFVK 355 (356)
T ss_dssp ETTTT-SSCHHHHHHHTTCCBTCEEEEEECGGGTTTTSCEESSSEECTTCCEEEEEEEEEEEC
T ss_pred EECCC-ccchHHHHHHhCCCCCCEEEEEEChHHccCCCCcCCCCcCCcCCeEEEEEEEEEEEc
Confidence 57887 799999999999999999999999999999988644577999999999999998754
No 229
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.41 E-value=3.1e-06 Score=73.97 Aligned_cols=121 Identities=15% Similarity=0.094 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhh--------------hhchhHHHH----------HH----
Q 024531 79 RIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMF--------------QLFGKYRDM----------AL---- 130 (266)
Q Consensus 79 ~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~--------------~~~~~~~~~----------~~---- 130 (266)
.......+...|..++..|+|++|+..|.+++...+..... ...+..... ..
T Consensus 51 ~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 130 (434)
T 4b4t_Q 51 RNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKR 130 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSC
T ss_pred hhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCc
Confidence 34445678899999999999999999999999877653211 001111110 00
Q ss_pred -HhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcC------CCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 024531 131 -AVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE------DENNVKALFRRGKARAELGQTDAAREDFLKAGKFAP 199 (266)
Q Consensus 131 -~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p 199 (266)
.+...++.++|.+|...|+|.+|+..+.+++.. .|....++..+|.+|..+|+|++|...|++++.+.+
T Consensus 131 ~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 131 VFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp CSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 122457889999999999999999999998754 344567899999999999999999999999998754
No 230
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.41 E-value=6.1e-06 Score=70.98 Aligned_cols=119 Identities=11% Similarity=-0.038 Sum_probs=82.5
Q ss_pred HHHHHHHhHHHHhhc---cHHHHHHHHHHHHhhhccchhhhh---------------chhHHHHHH------------Hh
Q 024531 83 ADRRKMDGNALFKEE---KLEEAMQQYEMAIAYMGDDFMFQL---------------FGKYRDMAL------------AV 132 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g---~~~~A~~~y~~al~~~~~~~~~~~---------------~~~~~~~~~------------~l 132 (266)
+-.++-+|..++..+ ++.+|+..|.+|++++|+....-- ......... ..
T Consensus 196 Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~ 275 (372)
T 3ly7_A 196 LLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNN 275 (372)
T ss_dssp GHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCc
Confidence 344556677776654 568999999999999998532200 000000000 11
Q ss_pred hhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q 024531 133 KNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK 202 (266)
Q Consensus 133 ~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 202 (266)
...++.-+|..+...|++++|+..+++|+.++|+ ..+|..+|.++...|++++|++.|.+|+.++|..+
T Consensus 276 ~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 276 LSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 1224455666777788899999999999888864 66778888888899999999999999999988764
No 231
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.39 E-value=5.5e-06 Score=81.83 Aligned_cols=141 Identities=12% Similarity=0.098 Sum_probs=105.4
Q ss_pred HHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcC
Q 024531 84 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE 163 (266)
Q Consensus 84 ~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l 163 (266)
..+...|..++..|+|++|+..|.++- .|..+|.|+.++|+++.|++.+++|...
T Consensus 1196 ad~~~iGd~le~eg~YeeA~~~Y~kA~-------------------------ny~rLA~tLvkLge~q~AIEaarKA~n~ 1250 (1630)
T 1xi4_A 1196 AHIQQVGDRCYDEKMYDAAKLLYNNVS-------------------------NFGRLASTLVHLGEYQAAVDGARKANST 1250 (1630)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHhhh-------------------------HHHHHHHHHHHhCCHHHHHHHHHHhCCH
Confidence 355679999999999999999999972 2778999999999999999999988655
Q ss_pred CC-------------------------CchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH--HH
Q 024531 164 DE-------------------------NNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEH--EK 216 (266)
Q Consensus 164 ~p-------------------------~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~--~~ 216 (266)
++ .+++.+..++..|...|.|++|+..|+.++.++|.+......|..+..+ -+
T Consensus 1251 ~aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLyaKy~pe 1330 (1630)
T 1xi4_A 1251 RTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQ 1330 (1630)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHHhCCHH
Confidence 43 2445666888899999999999999999999999999999888888665 33
Q ss_pred HHHHHHHHHHhcccCCCC---CCcccchhHHHhHHHH
Q 024531 217 AVYKKQKEIYKGIFGPRP---EPKQKKNWLIIFWQLL 250 (266)
Q Consensus 217 ~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~ 250 (266)
+..+..+. |..-.+.++ .+.....|....+.++
T Consensus 1331 klmEhlk~-f~~rini~k~~r~~e~~~lW~elv~LY~ 1366 (1630)
T 1xi4_A 1331 KMREHLEL-FWSRVNIPKVLRAAEQAHLWAELVFLYD 1366 (1630)
T ss_pred HHHHHHHH-HHHhcccchHhHHHHHHHHHHHHHHHHH
Confidence 44444444 333334333 2233356665555443
No 232
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.37 E-value=3.6e-06 Score=74.95 Aligned_cols=101 Identities=16% Similarity=0.031 Sum_probs=69.0
Q ss_pred HHHhHHHHhh----ccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHH-H--HHhhCHHHHHHHHHh
Q 024531 87 KMDGNALFKE----EKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAAC-L--LKLKRYEEAIGQCSL 159 (266)
Q Consensus 87 ~~~g~~~~~~----g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~-~--~~~~~~~~A~~~~~~ 159 (266)
...|..+... +++++|+..|.++. |.+.. +++++|.+ + ...+++++|+..|++
T Consensus 217 ~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~-----------------a~~~Lg~~~~~~~~~~d~~~A~~~~~~ 276 (452)
T 3e4b_A 217 DSVARVLGDATLGTPDEKTAQALLEKIA---PGYPA-----------------SWVSLAQLLYDFPELGDVEQMMKYLDN 276 (452)
T ss_dssp HHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTH-----------------HHHHHHHHHHHSGGGCCHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHH-----------------HHHHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 5567776554 68999999999988 54433 46677776 3 356677777777777
Q ss_pred HhcCCCCchHHHHHHHHHHHHcC-----CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 024531 160 VLGEDENNVKALFRRGKARAELG-----QTDAAREDFLKAGKFAPEDKSIARELRLLAE 213 (266)
Q Consensus 160 al~l~p~~~~a~~~~g~~~~~~g-----~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~ 213 (266)
+.+. .++.+++++|.+|. .| ++++|+.+|+++. |+++.+...|+.+..
T Consensus 277 Aa~~--g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~ 329 (452)
T 3e4b_A 277 GRAA--DQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIYR 329 (452)
T ss_dssp HHHT--TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHH
T ss_pred HHHC--CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHH
Confidence 7644 36777777777776 44 7777777777776 667777777766643
No 233
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.36 E-value=2.7e-06 Score=71.76 Aligned_cols=145 Identities=9% Similarity=-0.065 Sum_probs=99.8
Q ss_pred HHHHhHHHHhhccHHHHHHHHHHHHhhhc--cchhhh--------hchhH---HHHH---HHhh-------hhhhhhHHH
Q 024531 86 RKMDGNALFKEEKLEEAMQQYEMAIAYMG--DDFMFQ--------LFGKY---RDMA---LAVK-------NPCHLNMAA 142 (266)
Q Consensus 86 ~~~~g~~~~~~g~~~~A~~~y~~al~~~~--~~~~~~--------~~~~~---~~~~---~~l~-------~~~~~n~a~ 142 (266)
+.-.|.++...|++++|++.+.++|...| ...... ..+.. ...+ .... ..+..+++.
T Consensus 103 ~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Lae 182 (310)
T 3mv2_B 103 LYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAE 182 (310)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHH
Confidence 45788889999999999999999977664 332210 01111 1111 2222 234566655
Q ss_pred H--HHHhh--CHHHHHHHHHhHhcCCCC--chHHHHHHHHHHHHcCCHHHHHHHHHHHHhh----------CCCCHHHHH
Q 024531 143 C--LLKLK--RYEEAIGQCSLVLGEDEN--NVKALFRRGKARAELGQTDAAREDFLKAGKF----------APEDKSIAR 206 (266)
Q Consensus 143 ~--~~~~~--~~~~A~~~~~~al~l~p~--~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l----------~p~~~~~~~ 206 (266)
+ .+..| ++.+|...|+++....|+ .+..+++ +++.+|+|++|.+.++.++++ +|+|++++.
T Consensus 183 a~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~La 259 (310)
T 3mv2_B 183 SYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLA 259 (310)
T ss_dssp HHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHH
T ss_pred HHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHH
Confidence 5 66666 899999999999988887 3445555 899999999999999988887 588999997
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 024531 207 ELRLLAEHEKAVYKKQKEIYKGIFGPRPEP 236 (266)
Q Consensus 207 ~l~~l~~~~~~~~~~~~~~~~k~~~~~~~~ 236 (266)
++..+...+++ ...+++.++....|+.
T Consensus 260 N~i~l~~~lgk---~a~~l~~qL~~~~P~h 286 (310)
T 3mv2_B 260 NQITLALMQGL---DTEDLTNQLVKLDHEH 286 (310)
T ss_dssp HHHHHHHHTTC---TTHHHHHHHHHTTCCC
T ss_pred HHHHHHHHhCh---HHHHHHHHHHHhCCCC
Confidence 77767665554 3345566666555543
No 234
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.35 E-value=2.7e-06 Score=75.03 Aligned_cols=103 Identities=15% Similarity=0.119 Sum_probs=62.0
Q ss_pred HHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCC
Q 024531 85 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED 164 (266)
Q Consensus 85 ~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~ 164 (266)
.+...|+.++..|.|++|...|.++ + -+..+|.|+.++|+|++|++.+.++. +
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a----~---------------------n~~~LA~~L~~Lg~yq~AVea~~KA~--~ 176 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV----S---------------------NFGRLASTLVHLGEYQAAVDGARKAN--S 176 (449)
T ss_dssp -------------CTTTHHHHHHHT----T---------------------CHHHHHHHHHTTTCHHHHHHHHHHHT--C
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh----h---------------------hHHHHHHHHHHhccHHHHHHHHHHcC--C
Confidence 4455566666666666666666644 1 14455555555555555555555552 2
Q ss_pred C---------------------------CchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 024531 165 E---------------------------NNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEH 214 (266)
Q Consensus 165 p---------------------------~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~ 214 (266)
| .+++-...+..+|...|.+++|+..++.++.+++.+..+...|..+..+
T Consensus 177 ~~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~k 253 (449)
T 1b89_A 177 TRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSK 253 (449)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHT
T ss_pred chhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHh
Confidence 2 1222344566889999999999999999999999999999999988765
No 235
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.34 E-value=5.5e-06 Score=60.27 Aligned_cols=81 Identities=14% Similarity=0.106 Sum_probs=70.2
Q ss_pred hhhhHHHHHHHhhC---HHHHHHHHHhHhcCCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 024531 136 CHLNMAACLLKLKR---YEEAIGQCSLVLGEDEN-NVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLL 211 (266)
Q Consensus 136 ~~~n~a~~~~~~~~---~~~A~~~~~~al~l~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l 211 (266)
+.++.|.|+.+... ..+++..+...++.+|. .-+.+|.+|.+++++|+|++|..+.+.+|+.+|+|..+......+
T Consensus 42 t~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~I 121 (134)
T 3o48_A 42 SRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 121 (134)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Confidence 57899999998775 55799999999988884 578999999999999999999999999999999999998877766
Q ss_pred HHHHH
Q 024531 212 AEHEK 216 (266)
Q Consensus 212 ~~~~~ 216 (266)
..+..
T Consensus 122 e~ki~ 126 (134)
T 3o48_A 122 EDKIQ 126 (134)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
No 236
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=98.34 E-value=7.5e-07 Score=71.57 Aligned_cols=52 Identities=31% Similarity=0.524 Sum_probs=48.2
Q ss_pred ccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeec
Q 024531 8 KEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 62 (266)
Q Consensus 8 ~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~ 62 (266)
.+|+||+.+|..|+.|++..|.|+|.++||..|. + .|||+++++|+|+|.++
T Consensus 172 ~vI~G~eeaL~gMk~Gek~~v~IP~~laYG~~g~--~-~IPp~stLiF~VeL~~i 223 (224)
T 1q6h_A 172 GVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGV--P-GIPPNSTLVFDVELLDV 223 (224)
T ss_dssp GSCHHHHHHGGGSCTTCEEEEEECGGGTTTTTCB--T-TBCTTCCEEEEEEEEEE
T ss_pred CcchhHHHHHcCCCCCCEEEEEECchhhcCcCCC--C-CCCCCCEEEEEEEEEEe
Confidence 5899999999999999999999999999999887 3 49999999999999875
No 237
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.30 E-value=1.4e-05 Score=66.34 Aligned_cols=110 Identities=11% Similarity=-0.070 Sum_probs=85.6
Q ss_pred CHHHHHHHHHhHhcCCCC--chHHHHHHHHHHHHc-----CCHHHHHHHHHHHHhhCCCC-HHHHHHHHHHHHHHHHHHH
Q 024531 149 RYEEAIGQCSLVLGEDEN--NVKALFRRGKARAEL-----GQTDAAREDFLKAGKFAPED-KSIARELRLLAEHEKAVYK 220 (266)
Q Consensus 149 ~~~~A~~~~~~al~l~p~--~~~a~~~~g~~~~~~-----g~~~~A~~~~~~al~l~p~~-~~~~~~l~~l~~~~~~~~~ 220 (266)
....|...+++|+++||+ +..+|..+|..|... |+.++|.++|++|++++|+. ..+...++..........+
T Consensus 178 ~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~ 257 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRA 257 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHH
Confidence 378899999999999999 667999999999996 99999999999999999975 9998888876555434445
Q ss_pred HHHHHHhcccCCCCCCccc----chhHHHhHHHHHHHHHHHh
Q 024531 221 KQKEIYKGIFGPRPEPKQK----KNWLIIFWQLLVSLVLGLF 258 (266)
Q Consensus 221 ~~~~~~~k~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 258 (266)
.....+.+.+..++...|. ...+..-.+|+..-+-++|
T Consensus 258 ~a~~~L~kAL~a~p~~~P~~~lan~~~q~eA~~LL~~~~d~F 299 (301)
T 3u64_A 258 GFDEALDRALAIDPESVPHNKLLVILSQKRARWLKAHVQDFF 299 (301)
T ss_dssp HHHHHHHHHHHCCGGGCSSCHHHHHHHHHHHHHHHHTHHHHC
T ss_pred HHHHHHHHHHcCCCCCCCChhHHHHHHHHHHHHHHHHhHHhc
Confidence 5556678888888875444 2234444556776666666
No 238
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.27 E-value=1.2e-05 Score=59.28 Aligned_cols=79 Identities=14% Similarity=0.111 Sum_probs=68.7
Q ss_pred hhhhHHHHHHHhhC---HHHHHHHHHhHhcCCC-CchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 024531 136 CHLNMAACLLKLKR---YEEAIGQCSLVLGEDE-NNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLL 211 (266)
Q Consensus 136 ~~~n~a~~~~~~~~---~~~A~~~~~~al~l~p-~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l 211 (266)
+.++.|.|+.+... -.+++..+...+..+| ..-+.+|.+|..++++|+|++|..+.+.+|+.+|+|..+......+
T Consensus 41 t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~I 120 (144)
T 1y8m_A 41 SRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 120 (144)
T ss_dssp HHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 57899999998775 5579999999999888 4678999999999999999999999999999999999998766655
Q ss_pred HHH
Q 024531 212 AEH 214 (266)
Q Consensus 212 ~~~ 214 (266)
..+
T Consensus 121 e~~ 123 (144)
T 1y8m_A 121 EDK 123 (144)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 239
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.24 E-value=1.3e-05 Score=67.48 Aligned_cols=117 Identities=11% Similarity=0.057 Sum_probs=86.7
Q ss_pred HHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCC--CchHHHHHHHHHHH
Q 024531 102 AMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDE--NNVKALFRRGKARA 179 (266)
Q Consensus 102 A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p--~~~~a~~~~g~~~~ 179 (266)
|+..+++.+...+.... ++..+|.++...|++++|+..|.+++..+| .+..++...+.++.
T Consensus 85 a~~~l~~l~~~~~~~~~-----------------~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L 147 (310)
T 3mv2_B 85 NIEELENLLKDKQNSPY-----------------ELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVAL 147 (310)
T ss_dssp CCHHHHHTTTTSCCCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHH
Confidence 78888888876544322 356889999999999999999999999987 99999999999999
Q ss_pred HcCCHHHHHHHHHHHHhhCCC----CHHHHHHHHHH--HHHHH-HHHHHHHHHHhcccCCCCC
Q 024531 180 ELGQTDAAREDFLKAGKFAPE----DKSIARELRLL--AEHEK-AVYKKQKEIYKGIFGPRPE 235 (266)
Q Consensus 180 ~~g~~~~A~~~~~~al~l~p~----~~~~~~~l~~l--~~~~~-~~~~~~~~~~~k~~~~~~~ 235 (266)
.+|+.+.|.+.+++..+.+|+ +..+...|... .-..+ +..+..-..|..+....+.
T Consensus 148 ~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 148 LNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp HTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCS
T ss_pred HCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCC
Confidence 999999999999999999983 33444444433 32233 1233445667777655543
No 240
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.24 E-value=7.6e-06 Score=56.41 Aligned_cols=70 Identities=20% Similarity=0.179 Sum_probs=61.4
Q ss_pred HHHHHHHhHHHHhhcc---HHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHh
Q 024531 83 ADRRKMDGNALFKEEK---LEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 159 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~---~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~ 159 (266)
+..+...|..++..++ ..+|...+.+++.++|++.. ++..+|..++..|+|.+|+.++++
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~r-----------------A~~~lg~~~~~~g~y~~Ai~~w~~ 68 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEA-----------------ALSLIANDHFISFRFQEAIDTWVL 68 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHH-----------------HHHHHHHHHHHcCCHHHHHHHHHH
Confidence 5667788888876555 79999999999999999766 689999999999999999999999
Q ss_pred HhcCCCCchH
Q 024531 160 VLGEDENNVK 169 (266)
Q Consensus 160 al~l~p~~~~ 169 (266)
+++.+|.++.
T Consensus 69 ~l~~~p~~~~ 78 (93)
T 3bee_A 69 LLDSNDPNLD 78 (93)
T ss_dssp HHTCCCTTCC
T ss_pred HHhhCCCCcc
Confidence 9999998543
No 241
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.23 E-value=5.5e-06 Score=62.22 Aligned_cols=79 Identities=14% Similarity=0.118 Sum_probs=65.7
Q ss_pred HHHHHHHhHHHHhhc---cHHHHHHHHHHHHhhh-ccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHH
Q 024531 83 ADRRKMDGNALFKEE---KLEEAMQQYEMAIAYM-GDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCS 158 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g---~~~~A~~~y~~al~~~-~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~ 158 (266)
.+...+.|..+.+.+ ++++++..+...++.. |.. ...+++++|..|+++|+|++|..+++
T Consensus 32 ~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~----------------~rd~lY~LAv~~~kl~~Y~~A~~y~~ 95 (152)
T 1pc2_A 32 KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEE----------------QRDYVFYLAVGNYRLKEYEKALKYVR 95 (152)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHH----------------HHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccc----------------hHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 456677788888877 7889999999999987 532 22279999999999999999999999
Q ss_pred hHhcCCCCchHHHHHHHHH
Q 024531 159 LVLGEDENNVKALFRRGKA 177 (266)
Q Consensus 159 ~al~l~p~~~~a~~~~g~~ 177 (266)
++|+++|+|..|..-+..+
T Consensus 96 ~lL~ieP~n~QA~~Lk~~i 114 (152)
T 1pc2_A 96 GLLQTEPQNNQAKELERLI 114 (152)
T ss_dssp HHHHHCTTCHHHHHHHHHH
T ss_pred HHHhcCCCCHHHHHHHHHH
Confidence 9999999999887655443
No 242
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.06 E-value=9e-05 Score=73.42 Aligned_cols=107 Identities=16% Similarity=0.082 Sum_probs=74.4
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccch-------hhhh---chhHHHHHHHhhhhhhhhHHHHHHHhhCHHH
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDF-------MFQL---FGKYRDMALAVKNPCHLNMAACLLKLKRYEE 152 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~-------~~~~---~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~ 152 (266)
...+.+.|..+.+.|+|++|++.|..|+...++.. .+.. .++..+.........+.+.|.++...|+|++
T Consensus 1134 ~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~n~ad~~~iGd~le~eg~Yee 1213 (1630)
T 1xi4_A 1134 PSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDA 1213 (1630)
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHH
Confidence 44556667777777777777777777776664421 0000 1112222233334457789999999999999
Q ss_pred HHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 024531 153 AIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKF 197 (266)
Q Consensus 153 A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 197 (266)
|+.+|.++ ..|.++|.+|.++|+|++|++.+++|...
T Consensus 1214 A~~~Y~kA--------~ny~rLA~tLvkLge~q~AIEaarKA~n~ 1250 (1630)
T 1xi4_A 1214 AKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKANST 1250 (1630)
T ss_pred HHHHHHhh--------hHHHHHHHHHHHhCCHHHHHHHHHHhCCH
Confidence 99999886 47889999999999999999999998443
No 243
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.04 E-value=8.6e-05 Score=56.19 Aligned_cols=119 Identities=11% Similarity=0.042 Sum_probs=88.4
Q ss_pred HHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCC
Q 024531 85 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED 164 (266)
Q Consensus 85 ~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~ 164 (266)
.+.+....++..+.|+.|+-....++.+..++...-. ......++..+|.+++..++|..|...|++||.+.
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~s--------p~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~ 93 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFS--------PPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQK 93 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCccccc--------HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 4667788899999999999999998887654332100 12234468899999999999999999999987431
Q ss_pred ------C-------------------CchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 024531 165 ------E-------------------NNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLA 212 (266)
Q Consensus 165 ------p-------------------~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~ 212 (266)
| .+.+..|+++.||..++++++|+..++.+-. .-..+.+.-.|++++
T Consensus 94 k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip~-k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 94 KALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIPS-RQRTPKINMLLANLY 165 (167)
T ss_dssp HCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSCG-GGCCHHHHHHHHHHC
T ss_pred HHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCCc-hhcCHHHHHHHHHHh
Confidence 1 1236889999999999999999999775421 224677777777653
No 244
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.79 E-value=7.2e-05 Score=66.17 Aligned_cols=88 Identities=11% Similarity=0.054 Sum_probs=67.5
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhc-----cchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHH
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMG-----DDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAI 154 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~ 154 (266)
+..+..+...|..+...|+|++|+..|.++|.... +.+. ....++|+|.+|..+|++++|+
T Consensus 326 ~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~--------------~a~~l~nLa~~~~~~g~~~eA~ 391 (429)
T 3qwp_A 326 IYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPV--------------RGVQVMKVGKLQLHQGMFPQAM 391 (429)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHH--------------HHHHHHHHHHHHHHTTCHHHHH
T ss_pred hHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChH--------------HHHHHHHHHHHHHhcCCHHHHH
Confidence 44566677889999999999999999999998752 2222 3446999999999999999999
Q ss_pred HHHHhHhcC-----CCCch---HHHHHHHHHHHHc
Q 024531 155 GQCSLVLGE-----DENNV---KALFRRGKARAEL 181 (266)
Q Consensus 155 ~~~~~al~l-----~p~~~---~a~~~~g~~~~~~ 181 (266)
..+++|+++ -|+++ ..+.+++.+...+
T Consensus 392 ~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 392 KNLRLAFDIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 999999865 44444 4455666666543
No 245
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.68 E-value=0.00012 Score=64.68 Aligned_cols=70 Identities=7% Similarity=-0.051 Sum_probs=58.8
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhc-----cchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHH
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMG-----DDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAI 154 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~ 154 (266)
+..+..+..+|..+..+|+|++|+..|+++|.... +.+. ....++|+|.+|..+|++++|+
T Consensus 337 p~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~--------------~a~~l~nLa~~~~~qg~~~eA~ 402 (433)
T 3qww_A 337 VYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLN--------------VASMWLKLGRLYMGLENKAAGE 402 (433)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHH--------------HHHHHHHHHHHHHHTTCHHHHH
T ss_pred hHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChH--------------HHHHHHHHHHHHHhccCHHHHH
Confidence 45667778899999999999999999999998752 2222 3446999999999999999999
Q ss_pred HHHHhHhcC
Q 024531 155 GQCSLVLGE 163 (266)
Q Consensus 155 ~~~~~al~l 163 (266)
..+++|+++
T Consensus 403 ~~~~~Al~i 411 (433)
T 3qww_A 403 KALKKAIAI 411 (433)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999865
No 246
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.67 E-value=2e-05 Score=69.51 Aligned_cols=105 Identities=16% Similarity=0.072 Sum_probs=36.9
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhh-------hhchhHHHHHH---HhhhhhhhhHHHHHHHhhCHH
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMF-------QLFGKYRDMAL---AVKNPCHLNMAACLLKLKRYE 151 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~-------~~~~~~~~~~~---~l~~~~~~n~a~~~~~~~~~~ 151 (266)
....+...+..+...|+|++|+..++.+++..++.... ...+...+... .-....+.++|.++...|.|+
T Consensus 60 D~~~y~~V~~~ae~~g~~EeAi~yl~~ark~~~~~~i~~~Li~~Y~Klg~l~e~e~f~~~pn~~a~~~IGd~~~~~g~ye 139 (449)
T 1b89_A 60 DPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYD 139 (449)
T ss_dssp -------------------------------------------------CHHHHTTTTTCC----------------CTT
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCccchhHHHHHHHHHHhCCHHHHHHHHcCCcHHHHHHHHHHHHHcCCHH
Confidence 34466677777778889999999888888754331110 01111111100 011237889999999999999
Q ss_pred HHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 024531 152 EAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKA 194 (266)
Q Consensus 152 ~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a 194 (266)
+|..+|.++ ..+.++|.|+.++|+|++|++.++++
T Consensus 140 eA~~~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~KA 174 (449)
T 1b89_A 140 AAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKA 174 (449)
T ss_dssp THHHHHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHh--------hhHHHHHHHHHHhccHHHHHHHHHHc
Confidence 999999977 46889999999999999999999999
No 247
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.66 E-value=0.0014 Score=57.15 Aligned_cols=117 Identities=13% Similarity=0.043 Sum_probs=95.4
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhh-----chhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHH
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQL-----FGKYRDMALAVKNPCHLNMAACLLKLKRYEEAI 154 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~ 154 (266)
......+...|......|+...|...+.+|+.+......... .......+.+....+...++.++...|++.+|+
T Consensus 112 ~~~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~ 191 (388)
T 2ff4_A 112 LGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVI 191 (388)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 344556667777777789999999999999998754332221 123344566777778888999999999999999
Q ss_pred HHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 024531 155 GQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGK 196 (266)
Q Consensus 155 ~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~ 196 (266)
..+..++..+|.+..++..+-.++...|+..+|++.|+++-.
T Consensus 192 ~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 192 AELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988755
No 248
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=97.60 E-value=5.1e-05 Score=54.21 Aligned_cols=52 Identities=21% Similarity=0.319 Sum_probs=42.9
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEe-cCcccCCCCCCCCCCCCCCCceEEEEEEeec
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVG-WELGYGKEGSFSFPNVSPMADLVYEVVLIGF 62 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~-~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~ 62 (266)
+||.+ ++|+||+.+|..|+.|+...|.|+ |.. ||..+. +++++.|.+++.++
T Consensus 60 ~lG~g-~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~-Yg~~~~-------~g~~l~F~V~l~~V 112 (113)
T 1hxv_A 60 TIGSN-SFIKGFETGLIAMKVNQKKTLALTFPSD-YHVKEL-------QSKPVTFEVVLKAI 112 (113)
T ss_dssp EETSS-CSCTTHHHHHHTSCSSEEEEECCCCCTT-SSSSGG-------GSCCCEEEEEECCB
T ss_pred EECCC-ChhHHHHHHHCCCCCCCEEEEEEeCchh-hCcCCC-------CCCEEEEEEEEEEE
Confidence 57888 799999999999999999999996 554 775442 45789999998765
No 249
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.40 E-value=0.00079 Score=48.66 Aligned_cols=76 Identities=14% Similarity=0.084 Sum_probs=54.7
Q ss_pred HHHHHhHHHHhhccH---HHHHHHHHHHHhhh-ccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhH
Q 024531 85 RRKMDGNALFKEEKL---EEAMQQYEMAIAYM-GDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 160 (266)
Q Consensus 85 ~~~~~g~~~~~~g~~---~~A~~~y~~al~~~-~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~a 160 (266)
...+.|..+.+..+. .+++..+...+... |.. ...+++.+|..++++|+|.+|..+++.+
T Consensus 37 ~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~----------------~Rd~lY~LAvg~yklg~Y~~A~~~~~~l 100 (126)
T 1nzn_A 37 TQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEE----------------QRDYVFYLAVGNYRLKEYEKALKYVRGL 100 (126)
T ss_dssp HHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHH----------------HHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcch----------------HHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 334445555555443 33777777766654 211 2337999999999999999999999999
Q ss_pred hcCCCCchHHHHHHHH
Q 024531 161 LGEDENNVKALFRRGK 176 (266)
Q Consensus 161 l~l~p~~~~a~~~~g~ 176 (266)
|+.+|+|..|.--...
T Consensus 101 L~~eP~n~QA~~Lk~~ 116 (126)
T 1nzn_A 101 LQTEPQNNQAKELERL 116 (126)
T ss_dssp HHHCTTCHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHH
Confidence 9999999887755443
No 250
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.33 E-value=0.0027 Score=46.10 Aligned_cols=74 Identities=12% Similarity=0.069 Sum_probs=55.6
Q ss_pred HHhHHHHhhc---cHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCC
Q 024531 88 MDGNALFKEE---KLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED 164 (266)
Q Consensus 88 ~~g~~~~~~g---~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~ 164 (266)
+.|-.+.+.. +...++..+...+...|.. ...+++.+|..+.++|+|..|..+++.+|+.+
T Consensus 45 ~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~----------------~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~e 108 (134)
T 3o48_A 45 NYAWGLIKSTDVNDERLGVKILTDIYKEAESR----------------RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHE 108 (134)
T ss_dssp HHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGG----------------HHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHhcCcch----------------hHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhC
Confidence 3344444433 5667888888887766532 22378999999999999999999999999999
Q ss_pred CCchHHHHHHHHH
Q 024531 165 ENNVKALFRRGKA 177 (266)
Q Consensus 165 p~~~~a~~~~g~~ 177 (266)
|+|..|.--...+
T Consensus 109 P~N~QA~~Lk~~I 121 (134)
T 3o48_A 109 RNNKQVGALKSMV 121 (134)
T ss_dssp TTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 9998876554443
No 251
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=97.28 E-value=0.00017 Score=54.45 Aligned_cols=39 Identities=23% Similarity=0.365 Sum_probs=36.2
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCC
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGS 41 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~ 41 (266)
++|.+ ++|+||+.+|..|+.||+..|.|+|..+||..+.
T Consensus 47 ~vG~g-~vi~G~eeaL~gm~~Ge~~~v~Ipp~~aYG~~~~ 85 (157)
T 3pr9_A 47 FAGEG-QVLPGLDEAILEMDVGEEREVVLPPEKAFGKRDP 85 (157)
T ss_dssp ETTSS-SSCHHHHHHHHHCCTTCEEEEEECGGGTTCCCCG
T ss_pred EECCC-cHHHHHHHHHcCCCCCCEEEEEECcHHhcCCCCh
Confidence 57887 7999999999999999999999999999998775
No 252
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.19 E-value=0.0038 Score=45.91 Aligned_cols=74 Identities=12% Similarity=0.053 Sum_probs=55.9
Q ss_pred HHHhHHHHhhc---cHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcC
Q 024531 87 KMDGNALFKEE---KLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE 163 (266)
Q Consensus 87 ~~~g~~~~~~g---~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l 163 (266)
++.|..+.+.. +..+++..+...+...|.. ...+++.+|..+.++|+|.+|..+++.+|+.
T Consensus 43 F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~----------------~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~ 106 (144)
T 1y8m_A 43 FNYAWGLIKSTDVNDERLGVKILTDIYKEAESR----------------RRECLYYLTIGCYKLGEYSMAKRYVDTLFEH 106 (144)
T ss_dssp HHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCST----------------HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccc----------------hhHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 34444454443 4567888888888766543 2237899999999999999999999999999
Q ss_pred CCCchHHHHHHHH
Q 024531 164 DENNVKALFRRGK 176 (266)
Q Consensus 164 ~p~~~~a~~~~g~ 176 (266)
+|+|..|.--...
T Consensus 107 eP~n~QA~~Lk~~ 119 (144)
T 1y8m_A 107 ERNNKQVGALKSM 119 (144)
T ss_dssp CCCCHHHHHHHHH
T ss_pred CCCcHHHHHHHHH
Confidence 9999887654443
No 253
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=97.18 E-value=0.0002 Score=53.79 Aligned_cols=39 Identities=23% Similarity=0.460 Sum_probs=36.2
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCC
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGS 41 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~ 41 (266)
++|.+ .+++||+.+|..|+.|++..|+|+|..+||..+.
T Consensus 48 ~~G~g-~vi~G~eeaL~gm~~Ge~~~v~ipp~~aYG~~~~ 86 (151)
T 1ix5_A 48 VVGEG-QLIQGFEEAVLDMEVGDEKTVKIPAEKAYGNRNE 86 (151)
T ss_dssp ETTTT-CSCHHHHHHHHTCCTTCCCEEEECTTTSSCSCCS
T ss_pred EECCC-ChhHHHHHHHcCCCCCCEEEEEECcHHHCCCCCc
Confidence 57888 7999999999999999999999999999998765
No 254
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=97.12 E-value=0.00042 Score=52.44 Aligned_cols=39 Identities=26% Similarity=0.374 Sum_probs=35.9
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCC
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGS 41 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~ 41 (266)
++|.+ ++|+||+.+|..|+.|++..|.|+|..+||..+.
T Consensus 30 ~~G~g-~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~~ 68 (158)
T 3cgm_A 30 LHGHR-NLIPGLEEALEGREEGEAFQAHVPAEKAYGPHDP 68 (158)
T ss_dssp ETTSS-SSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCCG
T ss_pred EECCC-CcChHHHHHHcCCCCCCEEEEEECcHHHcCCCCc
Confidence 57888 8999999999999999999999999999998664
No 255
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=97.06 E-value=0.00051 Score=52.45 Aligned_cols=39 Identities=18% Similarity=0.324 Sum_probs=35.8
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCC
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGS 41 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~ 41 (266)
++|.+ ++|+||+.+|..|+.||+..|.|.|..+||....
T Consensus 58 ~lG~g-~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~~ 96 (169)
T 4dt4_A 58 RLGDA-SLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSP 96 (169)
T ss_dssp ETTSS-SSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCCG
T ss_pred EECCC-CccHHHHHHHcCCCCCCEEEEEEChHHhcCCCCh
Confidence 57888 7999999999999999999999999999997653
No 256
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.05 E-value=0.0025 Score=54.76 Aligned_cols=66 Identities=9% Similarity=-0.021 Sum_probs=56.6
Q ss_pred HHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCC
Q 024531 86 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDE 165 (266)
Q Consensus 86 ~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p 165 (266)
+...|..++..|+++.|+..+++|+.++|+. . ++..+|.++.-.|++++|+..+.+|+.++|
T Consensus 280 ~~alal~~l~~gd~d~A~~~l~rAl~Ln~s~-~-----------------a~~llG~~~~~~G~~~eA~e~~~~AlrL~P 341 (372)
T 3ly7_A 280 YQIKAVSALVKGKTDESYQAINTGIDLEMSW-L-----------------NYVLLGKVYEMKGMNREAADAYLTAFNLRP 341 (372)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCCCH-H-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhcCCCH-H-----------------HHHHHHHHHHHCCCHHHHHHHHHHHHhcCC
Confidence 3445667777899999999999999998752 2 477899999999999999999999999999
Q ss_pred CchH
Q 024531 166 NNVK 169 (266)
Q Consensus 166 ~~~~ 169 (266)
....
T Consensus 342 ~~~t 345 (372)
T 3ly7_A 342 GANT 345 (372)
T ss_dssp SHHH
T ss_pred CcCh
Confidence 8753
No 257
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.05 E-value=0.0036 Score=47.32 Aligned_cols=95 Identities=14% Similarity=0.122 Sum_probs=62.9
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhh-------chhHHHHHHHh--hhhhhhhHHHHHHHhhCHHH
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQL-------FGKYRDMALAV--KNPCHLNMAACLLKLKRYEE 152 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~-------~~~~~~~~~~l--~~~~~~n~a~~~~~~~~~~~ 152 (266)
.++.+...|+.+|..++|..|...|.+||.....-..... ....... ..+ -..+.+.+|.||.+++++.+
T Consensus 62 ~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s-~~~~~e~Elkykia~C~~~l~~~~~ 140 (167)
T 3ffl_A 62 KYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQS-QCLPSEIEVKYKLAECYTVLKQDKD 140 (167)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC---------------------CCCCHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCccc-ccccchHHHHHHHHHHHHHHCCHHH
Confidence 3667788999999999999999999999887643111100 0000000 001 12467889999999999999
Q ss_pred HHHHHHhHhcCCCCchHHHHHHHHHH
Q 024531 153 AIGQCSLVLGEDENNVKALFRRGKAR 178 (266)
Q Consensus 153 A~~~~~~al~l~p~~~~a~~~~g~~~ 178 (266)
|+..++.+-. .-..++.-..+|..|
T Consensus 141 Ai~~Le~Ip~-k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 141 AIAILDGIPS-RQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHHHTSCG-GGCCHHHHHHHHHHC
T ss_pred HHHHHhcCCc-hhcCHHHHHHHHHHh
Confidence 9998865422 235677777777655
No 258
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=97.02 E-value=0.00053 Score=51.52 Aligned_cols=39 Identities=26% Similarity=0.373 Sum_probs=36.0
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCC
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGS 41 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~ 41 (266)
++|.+ .+++||+.+|..|+.|++..|.|.|..+||..+.
T Consensus 40 ~~G~g-~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~~ 78 (151)
T 2kr7_A 40 IIGTN-QIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYES 78 (151)
T ss_dssp ETTCC-CSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCS
T ss_pred EECCC-CccHHHHHHHcCCCCCCEEEEEEecHHHcCCCCc
Confidence 57888 7999999999999999999999999999998764
No 259
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=96.97 E-value=0.00056 Score=54.90 Aligned_cols=39 Identities=23% Similarity=0.365 Sum_probs=36.1
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCC
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGS 41 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~ 41 (266)
++|.+ ++|+||+.+|..|+.|+...|.|+|..+||..+.
T Consensus 47 ~lG~g-~vIpG~eeaL~Gm~vGek~~v~Ippe~AYGe~~~ 85 (231)
T 3prb_A 47 FAGEG-QVLPGLDEAILEMDVGEEREVVLPPEKAFGKRDP 85 (231)
T ss_dssp ETTSS-SSCHHHHHHHHTCCTTCEEEEEECGGGTTCCCCG
T ss_pred EeCCC-cHHHHHHHHHcCCCCCCEEEEEeCcHHhcCCCCh
Confidence 57887 7999999999999999999999999999998774
No 260
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.94 E-value=0.0057 Score=57.10 Aligned_cols=135 Identities=10% Similarity=-0.021 Sum_probs=96.1
Q ss_pred HHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhh-CHHHHHHHHHhHhcCC
Q 024531 86 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLK-RYEEAIGQCSLVLGED 164 (266)
Q Consensus 86 ~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~-~~~~A~~~~~~al~l~ 164 (266)
+...++.....|..+.|...|.+|+...|.... .++...|..-.+.+ +++.|...|..+++..
T Consensus 437 Wi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~----------------~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~ 500 (679)
T 4e6h_A 437 YCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTP----------------DIYLENAYIEYHISKDTKTACKVLELGLKYF 500 (679)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCT----------------HHHHHHHHHHHTTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCh----------------HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHC
Confidence 333444455678899999999999987443211 14556666666665 4899999999999999
Q ss_pred CCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCc
Q 024531 165 ENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPE---DKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPK 237 (266)
Q Consensus 165 p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~---~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~~~ 237 (266)
|+++..+...+......|+.+.|...|++++...|+ ...+...........+.. +..+..++++....|+.+
T Consensus 501 p~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G~~-~~~~~v~~R~~~~~P~~~ 575 (679)
T 4e6h_A 501 ATDGEYINKYLDFLIYVNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESKVGSL-NSVRTLEKRFFEKFPEVN 575 (679)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTCCS-HHHHHHHHHHHHHSTTCC
T ss_pred CCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHhCCCCc
Confidence 999998888888888999999999999999999884 445555555554443332 344555666666555544
No 261
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.89 E-value=0.022 Score=53.23 Aligned_cols=147 Identities=6% Similarity=-0.077 Sum_probs=97.7
Q ss_pred HHhHHHHhhccHHHHHHHHHHHHhhhccchhh-----hhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 88 MDGNALFKEEKLEEAMQQYEMAIAYMGDDFMF-----QLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 88 ~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
..+......|+++.|...|.+++...+..... ............-...++...+....+.|..+.|...+.+|++
T Consensus 383 ~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~ 462 (679)
T 4e6h_A 383 SLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRR 462 (679)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34445556788888888888888764321100 0000000000111223566777777888999999999999998
Q ss_pred C-CCCchHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 024531 163 E-DENNVKALFRRGKARAELG-QTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPE 235 (266)
Q Consensus 163 l-~p~~~~a~~~~g~~~~~~g-~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~ 235 (266)
. .+.....|...|..-...+ +++.|...|+++++..|+++.............++ ....+..|.+.+...+.
T Consensus 463 ~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~-~~~AR~lferal~~~~~ 536 (679)
T 4e6h_A 463 LKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIYVNE-ESQVKSLFESSIDKISD 536 (679)
T ss_dssp TGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTC-HHHHHHHHHHHTTTSSS
T ss_pred hcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCC-HHHHHHHHHHHHHhcCC
Confidence 8 4455677777777776765 49999999999999999999988666665444433 45667788888866553
No 262
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=96.88 E-value=0.00092 Score=51.22 Aligned_cols=39 Identities=21% Similarity=0.364 Sum_probs=35.9
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCC
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGS 41 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~ 41 (266)
++|.+ .+|+||+.+|..|+.|++..|+|+|..+||..+.
T Consensus 35 ~lG~g-~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~~ 73 (171)
T 2k8i_A 35 LHGHG-SLISGLETALEGHEVGDKFDVAVGANDAYGQYDE 73 (171)
T ss_dssp ETTSC-SSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCCT
T ss_pred EECCC-CcchHHHHHHcCCCCCCEEEEEECcHHhcCCCCh
Confidence 57887 7999999999999999999999999999998754
No 263
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=96.77 E-value=0.00082 Score=52.62 Aligned_cols=39 Identities=21% Similarity=0.364 Sum_probs=36.0
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCC
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGS 41 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~ 41 (266)
++|.+ ++|+||+.+|..|+.|++..|+|+|..+||..+.
T Consensus 35 ~lG~g-~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~~ 73 (196)
T 2kfw_A 35 LHGHG-SLISGLETALEGHEVGDKFDVAVGANDAYGQYDE 73 (196)
T ss_dssp ESSSS-SSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCCT
T ss_pred EECCC-CcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCCh
Confidence 57888 7999999999999999999999999999998664
No 264
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.33 E-value=0.019 Score=53.99 Aligned_cols=59 Identities=12% Similarity=0.055 Sum_probs=53.4
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKA 194 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a 194 (266)
++...+.-++..|+|+.|+..+++|+...|.....|+.++.||..+|+|+.|+-.++.+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 44455777778899999999999999999999999999999999999999999888776
No 265
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.29 E-value=0.097 Score=38.86 Aligned_cols=96 Identities=9% Similarity=0.048 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHH
Q 024531 100 EEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARA 179 (266)
Q Consensus 100 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 179 (266)
+.-++.|.+|+...|... ... -.-.+.++.+.|.- ...++.++|...|+.++.+....++.|...|+--.
T Consensus 36 ~rlrd~YerAia~~Pp~k-~~~--------wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEi 105 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDK-YGQ--------NESFARIQVRFAEL-KAIQEPDDARDYFQMARANCKKFAFVHISFAQFEL 105 (161)
T ss_dssp HHHHHHHHHHHHHSCGGG-GTT--------CHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCccc-ccc--------HHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 788899999999988753 111 11123345555533 56799999999999999887788899999999999
Q ss_pred HcCCHHHHHHHHHHHHhhCCCCHHHH
Q 024531 180 ELGQTDAAREDFLKAGKFAPEDKSIA 205 (266)
Q Consensus 180 ~~g~~~~A~~~~~~al~l~p~~~~~~ 205 (266)
.+|+...|.+.+.+++.+.|...+..
T Consensus 106 Rqgnl~kARkILg~AiG~~~k~~~~l 131 (161)
T 4h7y_A 106 SQGNVKKSKQLLQKAVERGAVPLEML 131 (161)
T ss_dssp HTTCHHHHHHHHHHHHHTTCBCHHHH
T ss_pred HcccHHHHHHHHHHHhccCCCcHHHH
Confidence 99999999999999999999866554
No 266
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=96.01 E-value=0.0083 Score=52.89 Aligned_cols=56 Identities=21% Similarity=0.347 Sum_probs=47.7
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeecccc
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDET 65 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~~~~ 65 (266)
++|.+ .+|+||+.+|..|+.|+...|.+++..+||..+. ++.++.|.+.+..+...
T Consensus 188 ~lG~g-~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l-------ag~~~~F~V~v~~v~~~ 243 (432)
T 1w26_A 188 AMGQG-RMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL-------KGKAAKFAINLKKVEER 243 (432)
T ss_dssp ETTSC-CSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT-------SSCEEEEEEECCEECCE
T ss_pred EeCCC-CcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC-------CCceEEEEEEEEEEecc
Confidence 58888 7999999999999999999999999998886543 45689999998887553
No 267
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=95.97 E-value=0.064 Score=46.53 Aligned_cols=99 Identities=12% Similarity=-0.072 Sum_probs=77.4
Q ss_pred HHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCC---
Q 024531 88 MDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED--- 164 (266)
Q Consensus 88 ~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~--- 164 (266)
.+|..++..|+|.+|+..+.+.+........ ......++......|..++++.++...+.+|....
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd-----------~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai 172 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDD-----------KNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAI 172 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSC-----------THHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhcccc-----------chhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccC
Confidence 6799999999999999999999887654211 23356678889999999999999999998886432
Q ss_pred -C-Cch--HHHHHHHHHHH-HcCCHHHHHHHHHHHHhh
Q 024531 165 -E-NNV--KALFRRGKARA-ELGQTDAAREDFLKAGKF 197 (266)
Q Consensus 165 -p-~~~--~a~~~~g~~~~-~~g~~~~A~~~~~~al~l 197 (266)
| ... .....-|..++ ..++|..|..+|-.+++-
T Consensus 173 ~~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 173 YCPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 1 122 33445689999 899999999999999753
No 268
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=95.90 E-value=0.14 Score=38.87 Aligned_cols=96 Identities=13% Similarity=0.117 Sum_probs=70.7
Q ss_pred HHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh--cC--
Q 024531 88 MDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL--GE-- 163 (266)
Q Consensus 88 ~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al--~l-- 163 (266)
-.+..+|-.|+|..|+-+..+ + + ...+.+.-+.||.++++|..|+...+..| +.
T Consensus 38 L~~I~LyyngEY~R~Lf~L~~---l--N-----------------T~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~ 95 (242)
T 3kae_A 38 LMSIVLYLNGEYTRALFHLHK---L--N-----------------TCTSKYYESLCYKKKKDYKKAIKSLESILEGKVER 95 (242)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT---C--C-----------------BHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBC
T ss_pred hhhhhhhhcchHhHHHHHHHh---c--c-----------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 356777788888777765432 1 1 11235668999999999999999999998 32
Q ss_pred -------------CCCchHHHH-HHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHH
Q 024531 164 -------------DENNVKALF-RRGKARAELGQTDAAREDFLKAGKFAPEDKSIA 205 (266)
Q Consensus 164 -------------~p~~~~a~~-~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~ 205 (266)
||.+-+.++ .+|..+.+.|+-++|+.+|......+|--+.+.
T Consensus 96 d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~vE 151 (242)
T 3kae_A 96 DPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPVE 151 (242)
T ss_dssp CCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHH
T ss_pred CcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchHH
Confidence 233444444 579999999999999999999998887644444
No 269
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=95.88 E-value=0.053 Score=48.61 Aligned_cols=79 Identities=6% Similarity=-0.073 Sum_probs=70.4
Q ss_pred hhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 024531 135 PCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAE 213 (266)
Q Consensus 135 ~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~ 213 (266)
.++..+|....-...+..|..+|.+|+.+.|++...|..+|.+....|+.-+|+-+|.+++......+.+..+|..+..
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~ 231 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Confidence 3566778777777889999999999999999999999999999999999999999999999987778888888886643
No 270
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=95.75 E-value=0.12 Score=42.16 Aligned_cols=62 Identities=16% Similarity=0.040 Sum_probs=54.9
Q ss_pred HHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchH
Q 024531 91 NALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVK 169 (266)
Q Consensus 91 ~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~ 169 (266)
..+++.|+.++|+......|+..|.+.. +...+-..+.-.|+|++|...++.+.+++|....
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da~-----------------~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~ 66 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDAS-----------------LRSSFIELLCIDGDFERADEQLMQSIKLFPEYLP 66 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCHH-----------------HHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhH
Confidence 4678899999999999999999999876 4677788888899999999999999999997643
No 271
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=95.54 E-value=0.71 Score=41.16 Aligned_cols=141 Identities=12% Similarity=0.043 Sum_probs=90.9
Q ss_pred HHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhh----hc---hhHHHHHH----------------HhhhhhhhhHHH
Q 024531 86 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQ----LF---GKYRDMAL----------------AVKNPCHLNMAA 142 (266)
Q Consensus 86 ~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~----~~---~~~~~~~~----------------~l~~~~~~n~a~ 142 (266)
+..-+..+...|+.+.|...|.+|+.. |.+...- .. ++..+.+. .-...++...+.
T Consensus 216 W~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~ 294 (493)
T 2uy1_A 216 YFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLN 294 (493)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHH
Confidence 444566667789999999999999999 8764221 00 11100110 001234566666
Q ss_pred HHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 024531 143 CLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELG-QTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKK 221 (266)
Q Consensus 143 ~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g-~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~ 221 (266)
...+.++.+.|...+.+| ...+.....+...|..-...+ +.+.|...|+.+++..|+++.............+. ...
T Consensus 295 ~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~~~-~~~ 372 (493)
T 2uy1_A 295 YVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGD-EEN 372 (493)
T ss_dssp HHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC-HHH
T ss_pred HHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCC-HHH
Confidence 666788999999999999 433334555655666666566 69999999999999999988765444443322222 234
Q ss_pred HHHHHhcc
Q 024531 222 QKEIYKGI 229 (266)
Q Consensus 222 ~~~~~~k~ 229 (266)
.+..|.++
T Consensus 373 aR~l~er~ 380 (493)
T 2uy1_A 373 ARALFKRL 380 (493)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHH
Confidence 45667665
No 272
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.45 E-value=0.11 Score=45.71 Aligned_cols=100 Identities=8% Similarity=-0.125 Sum_probs=78.7
Q ss_pred HHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcC--
Q 024531 86 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE-- 163 (266)
Q Consensus 86 ~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l-- 163 (266)
+..+|..++..|+++.|++.|.++......... .+.++.+...+++..++|..+..+++++-.+
T Consensus 134 ~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~--------------kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~ 199 (429)
T 4b4t_R 134 WINLGEYYAQIGDKDNAEKTLGKSLSKAISTGA--------------KIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIE 199 (429)
T ss_dssp CHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCS--------------HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHH--------------HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhh
Confidence 457899999999999999999999887765432 3446888888999999999999999998644
Q ss_pred -CCC-c--hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 024531 164 -DEN-N--VKALFRRGKARAELGQTDAAREDFLKAGKFAP 199 (266)
Q Consensus 164 -~p~-~--~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p 199 (266)
.++ . .+.....|..+...++|.+|...|..++....
T Consensus 200 ~~~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 200 KGGDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp TCCCTHHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHHSC
T ss_pred cCCCHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhccCC
Confidence 221 1 13444568888999999999999998876544
No 273
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=95.37 E-value=0.14 Score=41.80 Aligned_cols=68 Identities=16% Similarity=0.078 Sum_probs=60.5
Q ss_pred HHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q 024531 142 ACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELR 209 (266)
Q Consensus 142 ~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~ 209 (266)
..+++.|..++|+..+...++-+|.|......+-+.+.-.|+|+.|..-++-+.+++|+....-..+.
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr 72 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLR 72 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHH
Confidence 34567899999999999999999999999999999999999999999999999999999765554444
No 274
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.79 E-value=0.12 Score=48.67 Aligned_cols=62 Identities=23% Similarity=0.284 Sum_probs=55.4
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
...+..++..+..+|+|+-|+..-++|+...|.+.. .+..+|.||..+|+|+.|+-.++..-
T Consensus 337 ~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~-----------------tW~~La~vYi~l~d~e~ALLtLNScP 398 (754)
T 4gns_B 337 SDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFE-----------------SWYNLARCHIKKEEYEKALFAINSMP 398 (754)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhH-----------------HHHHHHHHHHHhccHHHHHHHHhcCC
Confidence 345677888899999999999999999999999877 59999999999999999999888763
No 275
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.44 E-value=0.82 Score=40.23 Aligned_cols=105 Identities=11% Similarity=-0.083 Sum_probs=76.9
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
.+..-..++..++..|+|.+|.........-.-...+ ....+..+......|...++|.+|...++++.
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~-----------~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~ 204 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYGSME-----------MSEKIQFILEQMELSILKGDYSQATVLSRKIL 204 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSC-----------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhccc-----------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 3455567899999999999999999887542211111 22245567788899999999999999999874
Q ss_pred ----cCC-CCch--HHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 024531 162 ----GED-ENNV--KALFRRGKARAELGQTDAAREDFLKAGKF 197 (266)
Q Consensus 162 ----~l~-p~~~--~a~~~~g~~~~~~g~~~~A~~~~~~al~l 197 (266)
... |... ..+...|..+...++|.+|-.+|..++..
T Consensus 205 ~~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 205 KKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HhhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 222 2222 34556799999999999999999988764
No 276
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=93.61 E-value=1.3 Score=39.43 Aligned_cols=109 Identities=11% Similarity=-0.099 Sum_probs=78.3
Q ss_pred HHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhh-CHHHHHHHHHhHhcCC
Q 024531 86 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLK-RYEEAIGQCSLVLGED 164 (266)
Q Consensus 86 ~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~-~~~~A~~~~~~al~l~ 164 (266)
+..-+....+.++.+.|...|.+| . .|.... .++...|..-...+ +.+.|...++.+++..
T Consensus 289 w~~y~~~~~r~~~~~~AR~i~~~A-~-~~~~~~----------------~v~i~~A~lE~~~~~d~~~ar~ife~al~~~ 350 (493)
T 2uy1_A 289 RINHLNYVLKKRGLELFRKLFIEL-G-NEGVGP----------------HVFIYCAFIEYYATGSRATPYNIFSSGLLKH 350 (493)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHH-T-TSCCCH----------------HHHHHHHHHHHHHHCCSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHh-h-CCCCCh----------------HHHHHHHHHHHHHCCChHHHHHHHHHHHHHC
Confidence 334444555677899999999999 3 333111 13555566566666 6999999999999999
Q ss_pred CCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q 024531 165 ENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEK 216 (266)
Q Consensus 165 p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~ 216 (266)
|+++..+...+.....+|+.+.|...|+++ +....+...........+
T Consensus 351 ~~~~~~~~~yid~e~~~~~~~~aR~l~er~----~k~~~lw~~~~~fE~~~G 398 (493)
T 2uy1_A 351 PDSTLLKEEFFLFLLRIGDEENARALFKRL----EKTSRMWDSMIEYEFMVG 398 (493)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHS----CCBHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHCC
Confidence 998887777788788999999999999998 345666666665544433
No 277
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=93.20 E-value=0.59 Score=41.79 Aligned_cols=80 Identities=11% Similarity=-0.131 Sum_probs=68.6
Q ss_pred HHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcC
Q 024531 84 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE 163 (266)
Q Consensus 84 ~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l 163 (266)
..+..+|+..-....+..|...|.+|+.+.|.... .|+.+|......|+.-+|+-+|-+++..
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~-----------------~~nqLavla~~~~~~l~a~y~y~rsl~~ 215 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQ-----------------PYNQLAILASSKGDHLTTIFYYCRSIAV 215 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHSS
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCc-----------------hHHHHHHHHhcccccHHHHHHHHHHHhc
Confidence 35567899988889999999999999999999665 5999999999999999999999999988
Q ss_pred CCCchHHHHHHHHHHHH
Q 024531 164 DENNVKALFRRGKARAE 180 (266)
Q Consensus 164 ~p~~~~a~~~~g~~~~~ 180 (266)
....+.+.-++...+..
T Consensus 216 ~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 216 KFPFPAASTNLQKALSK 232 (497)
T ss_dssp SBCCHHHHHHHHHHHHH
T ss_pred CCCChhHHHHHHHHHHH
Confidence 77777777777766654
No 278
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=93.18 E-value=1.7 Score=38.79 Aligned_cols=97 Identities=7% Similarity=-0.070 Sum_probs=74.2
Q ss_pred HHHHHhHHHHhhccHHHHHHHHHHHHhh--hccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 85 RRKMDGNALFKEEKLEEAMQQYEMAIAY--MGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 85 ~~~~~g~~~~~~g~~~~A~~~y~~al~~--~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
.+...-..+.+.|++++|...|.+.... .|+.. .|+.+-.+|.+.|++++|...+....+
T Consensus 107 tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~------------------tyn~lI~~~~~~g~~~~A~~l~~~M~~ 168 (501)
T 4g26_A 107 TFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLR------------------SYGPALFGFCRKGDADKAYEVDAHMVE 168 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHH------------------HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccc------------------eehHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 3445556788889999999999887664 23322 366777888899999999999988764
Q ss_pred C--CCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--CCC
Q 024531 163 E--DENNVKALFRRGKARAELGQTDAAREDFLKAGKF--APE 200 (266)
Q Consensus 163 l--~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l--~p~ 200 (266)
. .| +...|..+-.++...|+.++|.+.|++..+. .|+
T Consensus 169 ~G~~P-d~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps 209 (501)
T 4g26_A 169 SEVVP-EEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVS 209 (501)
T ss_dssp TTCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBC
T ss_pred cCCCC-CHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcC
Confidence 4 44 4567778888999999999999999987663 455
No 279
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=93.08 E-value=0.036 Score=48.15 Aligned_cols=56 Identities=13% Similarity=0.236 Sum_probs=43.9
Q ss_pred ccCCCCccchhHHHHhhcCCCCcEEEEEEecCcccCCCCCCCCCCCCCCCceEEEEEEeecccc
Q 024531 2 VLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDET 65 (266)
Q Consensus 2 ~lg~~~~~~~gl~~~l~~m~~gE~~~~~i~~~~~~~~~g~~~~~~ip~~~~~~~~i~l~~~~~~ 65 (266)
+||.+ .+|+||+.+|..|+.|+...|.++..-.|+..+ .++.++.|.+.+..+...
T Consensus 191 ~lG~g-~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~-------laGk~~~F~V~v~~i~~~ 246 (392)
T 1t11_A 191 EMGAG-RMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAEN-------LKGKAAKFAIKVNKVEAR 246 (392)
T ss_dssp ETTSC-CBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTT-------TSSCEEEECCCEEEEEEE
T ss_pred EecCC-CcchhHHHHhCCCCCCCEEEEEEeCccccccCC-------CCCCeEEEEEEEEEEEcC
Confidence 58988 899999999999999999999997333455322 245788999998887553
No 280
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=92.81 E-value=2.1 Score=38.23 Aligned_cols=120 Identities=13% Similarity=0.012 Sum_probs=82.2
Q ss_pred ccHHHHHHHHHHHHhh--hccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcC--CCCchHHHH
Q 024531 97 EKLEEAMQQYEMAIAY--MGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE--DENNVKALF 172 (266)
Q Consensus 97 g~~~~A~~~y~~al~~--~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l--~p~~~~a~~ 172 (266)
+..+.|.+.|.+.... .|+. ..|+.+-.+|.+.|++++|...+++.... .| +...|.
T Consensus 84 ~~l~~A~~lf~~M~~~G~~Pd~------------------~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~P-d~~tyn 144 (501)
T 4g26_A 84 PGLSRGFDIFKQMIVDKVVPNE------------------ATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQP-RLRSYG 144 (501)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCH------------------HHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCC-CHHHHH
T ss_pred chHHHHHHHHHHHHHhCCCCCH------------------HHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC-ccceeh
Confidence 4467777777766543 2332 24778889999999999999999987654 44 567788
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCc
Q 024531 173 RRGKARAELGQTDAAREDFLKAGKF--APEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPK 237 (266)
Q Consensus 173 ~~g~~~~~~g~~~~A~~~~~~al~l--~p~~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~~~~~~~ 237 (266)
.+-.+|...|+.++|.+.|+...+. .|+ ......|-....+.++.. +...++.+|-+....++
T Consensus 145 ~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd-~~ty~~Li~~~~~~g~~d-~A~~ll~~Mr~~g~~ps 209 (501)
T 4g26_A 145 PALFGFCRKGDADKAYEVDAHMVESEVVPE-EPELAALLKVSMDTKNAD-KVYKTLQRLRDLVRQVS 209 (501)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHTSSBC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhcCCCCC-HHHHHHHHHHHhhCCCHH-HHHHHHHHHHHhCCCcC
Confidence 8888999999999999999998874 455 444444444444444443 34455677754444433
No 281
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=91.75 E-value=1.7 Score=37.45 Aligned_cols=79 Identities=16% Similarity=0.055 Sum_probs=60.7
Q ss_pred HHHHHHHhhCHHHHHHHHHhHhcCCCCc----------------------hHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 024531 140 MAACLLKLKRYEEAIGQCSLVLGEDENN----------------------VKALFRRGKARAELGQTDAAREDFLKAGKF 197 (266)
Q Consensus 140 ~a~~~~~~~~~~~A~~~~~~al~l~p~~----------------------~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 197 (266)
.|......|+...|...+.+|+.+.... ..+...++.++...|++.+|+..+..++..
T Consensus 121 ~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~ 200 (388)
T 2ff4_A 121 AGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFE 200 (388)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 3444445688999999999999874311 235556788899999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 024531 198 APEDKSIARELRLLAEHEKAV 218 (266)
Q Consensus 198 ~p~~~~~~~~l~~l~~~~~~~ 218 (266)
+|-+..++..+..+....++.
T Consensus 201 ~P~~E~~~~~lm~al~~~Gr~ 221 (388)
T 2ff4_A 201 HPYREPLWTQLITAYYLSDRQ 221 (388)
T ss_dssp STTCHHHHHHHHHHHHTTTCH
T ss_pred CCCCHHHHHHHHHHHHHcCCH
Confidence 999998888888775544433
No 282
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=90.88 E-value=0.73 Score=30.36 Aligned_cols=35 Identities=26% Similarity=0.230 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhh
Q 024531 79 RIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYM 113 (266)
Q Consensus 79 ~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~ 113 (266)
....+-.+..+|...-+.|+|.+|+..|..+|+..
T Consensus 7 ~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l 41 (83)
T 2v6y_A 7 LEDMARKYAILAVKADKEGKVEDAITYYKKAIEVL 41 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 56678888899999999999999999999999875
No 283
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=90.62 E-value=6.7 Score=32.75 Aligned_cols=118 Identities=11% Similarity=-0.062 Sum_probs=67.7
Q ss_pred HHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhh-hHHHHHHHh-------hCHHHHHH-
Q 024531 85 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHL-NMAACLLKL-------KRYEEAIG- 155 (266)
Q Consensus 85 ~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~-n~a~~~~~~-------~~~~~A~~- 155 (266)
.....|-.++..|+|.+|+..|..+|...|-.... ..++.++.+++...+.. -+|... .+ .+..+.++
T Consensus 116 ~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~--~~~e~~e~~eli~icrEYilal~i-El~Rr~l~~~~~kR~lEL 192 (325)
T 3mv2_A 116 EKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVD--DAEDEKLAHKILETAREYILGLSI-ELERRSLKEGNTVRMLEL 192 (325)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBC--SSHHHHHHHHHHHHHHHHHHHHHH-HHHHHTCCTTCHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeec--cHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCcccHHHHHHH
Confidence 34568999999999999999999999988743211 11222233333222222 222211 11 11111111
Q ss_pred -HHHhHhcCCCCchH-HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHH
Q 024531 156 -QCSLVLGEDENNVK-ALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIA 205 (266)
Q Consensus 156 -~~~~al~l~p~~~~-a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~ 205 (266)
.|=.-..+.|.+.- ++...-...++.++|..|...-++.|++.|..+.+.
T Consensus 193 AAYFT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~a~ 244 (325)
T 3mv2_A 193 AAYFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPRAE 244 (325)
T ss_dssp HHHGGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHHHH
T ss_pred HHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHHHH
Confidence 11122344444432 333334556799999999999999999999755443
No 284
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=88.65 E-value=5.3 Score=37.12 Aligned_cols=47 Identities=19% Similarity=-0.005 Sum_probs=38.1
Q ss_pred HHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 024531 143 CLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKA 194 (266)
Q Consensus 143 ~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a 194 (266)
..+.+|+++.|.+.++.. ++...|-.+|..+...++++.|+.+|.++
T Consensus 661 ~~l~~~~~~~A~~~~~~~-----~~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 661 LALKVGQLTLARDLLTDE-----SAEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHTCHHHHHHHHTTC-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhhcCCHHHHHHHHHhh-----CcHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 346788888888876432 46778889999999999999999999986
No 285
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=88.33 E-value=6.9 Score=29.72 Aligned_cols=89 Identities=13% Similarity=0.048 Sum_probs=60.3
Q ss_pred hhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHh-----------------hCCC
Q 024531 138 LNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGK-----------------FAPE 200 (266)
Q Consensus 138 ~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~-----------------l~p~ 200 (266)
..++..+.-.|+|..|+-.+.. + +...+.|..+.||..+.+|..|+.+++..++ .+|.
T Consensus 37 lL~~I~LyyngEY~R~Lf~L~~---l--NT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~ 111 (242)
T 3kae_A 37 MLMSIVLYLNGEYTRALFHLHK---L--NTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPG 111 (242)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHT---C--CBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTT
T ss_pred hhhhhhhhhcchHhHHHHHHHh---c--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccc
Confidence 4567788889999998876532 2 4678889999999999999999999999992 2466
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 024531 201 DKSIARELRLLAEHEKAVYKKQKEIYKGIFG 231 (266)
Q Consensus 201 ~~~~~~~l~~l~~~~~~~~~~~~~~~~k~~~ 231 (266)
+++.-..+.-..-.+-...++.-..|..-|+
T Consensus 112 DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~ 142 (242)
T 3kae_A 112 DEEFFESLLGDLCTLSGYREEGIGHYVRSFG 142 (242)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHhhhHhhhhcC
Confidence 6665544433323333334444444444433
No 286
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=87.99 E-value=2.5 Score=29.74 Aligned_cols=44 Identities=25% Similarity=0.234 Sum_probs=34.9
Q ss_pred CCCCCHH-HHHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhc
Q 024531 71 RSDMTVE-ERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMG 114 (266)
Q Consensus 71 ~~~~~~~-~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~ 114 (266)
...|+.. ..+..+..+..+|...-..|+|.+|+.+|..++++.-
T Consensus 5 ~~~m~~~~~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~ 49 (117)
T 2cpt_A 5 SSGMSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFL 49 (117)
T ss_dssp CCCSCCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred cccCCccHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 3445434 4566788888899999999999999999999998753
No 287
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=87.78 E-value=11 Score=31.41 Aligned_cols=114 Identities=12% Similarity=-0.014 Sum_probs=66.2
Q ss_pred HHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhh-hHHHHHHHh--hC-----HHHHHH--
Q 024531 86 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHL-NMAACLLKL--KR-----YEEAIG-- 155 (266)
Q Consensus 86 ~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~-n~a~~~~~~--~~-----~~~A~~-- 155 (266)
....|-.++..|++.+|+..|..+|...|-.... ..++.++.+++...+.. -+|... .+ .. .+....
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~--~~~e~~e~~eli~icreYilal~i-El~Rr~l~~~~~~~~kR~l 181 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVD--NKQEIAEAQQLITICREYIVGLSM-ETERKKLPKETLEQQKRIC 181 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCC--SHHHHHHHHHHHHHHHHHHHHHHH-HHHHTTSCCCSHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeec--cHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcccCCchhHHHHH
Confidence 4578999999999999999999999988743211 11222233333322222 222221 21 11 111111
Q ss_pred ---HHHhHhcCCCCchH-HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q 024531 156 ---QCSLVLGEDENNVK-ALFRRGKARAELGQTDAAREDFLKAGKFAPEDK 202 (266)
Q Consensus 156 ---~~~~al~l~p~~~~-a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 202 (266)
.|=.-..+.|.+.- ++...-...++.++|..|...-++.|++.|..+
T Consensus 182 ELAAYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~ 232 (320)
T 3mkr_B 182 EMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPE 232 (320)
T ss_dssp HHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCHH
T ss_pred HHHHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHH
Confidence 11112244554433 333334456799999999999999999998743
No 288
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=86.99 E-value=1.7 Score=33.12 Aligned_cols=47 Identities=13% Similarity=0.104 Sum_probs=40.9
Q ss_pred HHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 024531 144 LLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAG 195 (266)
Q Consensus 144 ~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al 195 (266)
.+.+|+++.|.+.++.. ++...|-++|......|+++-|..+|+++-
T Consensus 15 AL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 15 ALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp HHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred HHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 35789999999998765 567889999999999999999999999763
No 289
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=86.85 E-value=3.5 Score=37.88 Aligned_cols=58 Identities=10% Similarity=-0.043 Sum_probs=47.8
Q ss_pred hHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 024531 139 NMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGK 196 (266)
Q Consensus 139 n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~ 196 (266)
.++...++.|+|..|...+...-.-.+....+.|.+|.++..+|+.++|...|+.+..
T Consensus 290 ~~~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 290 RRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 3444456789999999999876654445688999999999999999999999998875
No 290
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=86.78 E-value=1.2 Score=39.85 Aligned_cols=66 Identities=17% Similarity=0.031 Sum_probs=54.1
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhcCCC---Cc--hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLGEDE---NN--VKALFRRGKARAELGQTDAAREDFLKAGKFAPED 201 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~l~p---~~--~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~ 201 (266)
+++-+-..|+..+.|+.|.....++.-..+ ++ ...+|..|.++.-+++|.+|.+++..|+...|.+
T Consensus 233 l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 233 LINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred HHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 566677899999999999999999853211 11 3457788999999999999999999999988864
No 291
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=86.52 E-value=1.8 Score=28.45 Aligned_cols=38 Identities=24% Similarity=0.211 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhc
Q 024531 77 EERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMG 114 (266)
Q Consensus 77 ~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~ 114 (266)
......+-.+..+|...-+.|+|.+|+..|..+|+..-
T Consensus 13 ~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~ 50 (83)
T 2w2u_A 13 VMLEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLA 50 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 34567788888999999999999999999999998753
No 292
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=86.03 E-value=6.3 Score=29.87 Aligned_cols=29 Identities=7% Similarity=-0.105 Sum_probs=19.5
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHh
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIA 111 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~ 111 (266)
...++..|......|+++-|...|.++=+
T Consensus 34 ~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D 62 (177)
T 3mkq_B 34 SITWERLIQEALAQGNASLAEMIYQTQHS 62 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHhCC
Confidence 34566677777777777777777776544
No 293
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=84.22 E-value=7.9 Score=28.30 Aligned_cols=61 Identities=18% Similarity=0.152 Sum_probs=42.9
Q ss_pred hhhHHHHH-HHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 024531 137 HLNMAACL-LKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKF 197 (266)
Q Consensus 137 ~~n~a~~~-~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 197 (266)
|.++|.-+ ...|.-++-.+.++..+.-.+-++..++.+|.+|.++|+-.+|.+.+.+|.+-
T Consensus 93 ~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 93 HVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 34444333 23444555455555556667778999999999999999999999999998863
No 294
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=83.95 E-value=5.8 Score=36.86 Aligned_cols=25 Identities=12% Similarity=0.033 Sum_probs=17.2
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhH
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLV 160 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~a 160 (266)
.+.++|..+.+.++++.|+..|.++
T Consensus 683 ~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 683 KWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 3666777777777777777777654
No 295
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=83.58 E-value=3.6 Score=26.28 Aligned_cols=40 Identities=18% Similarity=0.105 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccch
Q 024531 78 ERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDF 117 (266)
Q Consensus 78 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~ 117 (266)
++........+.|..+...|++++|+.+|-+||..+|...
T Consensus 12 ~~e~~Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~ 51 (73)
T 3ax2_A 12 AVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQ 51 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCCHH
Confidence 3334455556889999999999999999999999998743
No 296
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=81.45 E-value=1.7 Score=28.60 Aligned_cols=35 Identities=17% Similarity=0.144 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhh
Q 024531 79 RIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYM 113 (266)
Q Consensus 79 ~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~ 113 (266)
....+..+..+|...-..|+|.+|+..|..+++..
T Consensus 9 ~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l 43 (85)
T 2v6x_A 9 FLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYL 43 (85)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 34567777888888889999999999999999865
No 297
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=81.02 E-value=5 Score=26.26 Aligned_cols=15 Identities=13% Similarity=0.009 Sum_probs=7.0
Q ss_pred HHHHHHHHHhhCCCC
Q 024531 187 AREDFLKAGKFAPED 201 (266)
Q Consensus 187 A~~~~~~al~l~p~~ 201 (266)
|++.|..++...|+.
T Consensus 45 aie~l~~alk~e~d~ 59 (83)
T 2w2u_A 45 AIEVLAQLVSLYRDG 59 (83)
T ss_dssp HHHHHHHHHHHSTTS
T ss_pred HHHHHHHHHHHCCCH
Confidence 333444444455553
No 298
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=80.52 E-value=5.5 Score=26.83 Aligned_cols=42 Identities=19% Similarity=0.150 Sum_probs=35.7
Q ss_pred CHHHHHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccc
Q 024531 75 TVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDD 116 (266)
Q Consensus 75 ~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~ 116 (266)
..+.+..........|..+...|+++.|+.+|-+||..+|..
T Consensus 12 d~e~~e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP 53 (95)
T 1om2_A 12 DAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQP 53 (95)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSCH
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 455566667777889999999999999999999999999874
No 299
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=79.39 E-value=4.1 Score=27.29 Aligned_cols=36 Identities=19% Similarity=0.102 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhc
Q 024531 79 RIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMG 114 (266)
Q Consensus 79 ~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~ 114 (266)
....+..+...|...-..|+|.+|+..|..+++..-
T Consensus 11 ~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~ 46 (93)
T 1wfd_A 11 DSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLL 46 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 345677788889999999999999999999998753
No 300
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=79.32 E-value=24 Score=34.53 Aligned_cols=94 Identities=6% Similarity=-0.119 Sum_probs=72.4
Q ss_pred HHHHHhHHHHhhccHHHHHHHHHHHHh-----hhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHh
Q 024531 85 RRKMDGNALFKEEKLEEAMQQYEMAIA-----YMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 159 (266)
Q Consensus 85 ~~~~~g~~~~~~g~~~~A~~~y~~al~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~ 159 (266)
.+...=+.+.+.|+.++|...|....+ ..|+.. .|+-+-..|.+.|++++|...+++
T Consensus 129 TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~Pdvv------------------TYNtLI~Glck~G~~~eA~~Lf~e 190 (1134)
T 3spa_A 129 RLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLD------------------MYNAVMLGWARQGAFKELVYVLFM 190 (1134)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHH------------------HHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHh------------------HHHHHHHHHHhCCCHHHHHHHHHH
Confidence 456677889999999999999976543 234422 477888899999999999999998
Q ss_pred Hhc--CCCCchHHHHHHHHHHHHcCC-HHHHHHHHHHHHhh
Q 024531 160 VLG--EDENNVKALFRRGKARAELGQ-TDAAREDFLKAGKF 197 (266)
Q Consensus 160 al~--l~p~~~~a~~~~g~~~~~~g~-~~~A~~~~~~al~l 197 (266)
... +.| |.-.|..+-.++.+.|+ .++|.+.|+.....
T Consensus 191 M~~~G~~P-DvvTYntLI~glcK~G~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 191 VKDAGLTP-DLLSYAAALQCMGRQDQDAGTIERCLEQMSQE 230 (1134)
T ss_dssp HHHTTCCC-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHcCCCC-cHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Confidence 764 455 56667777778888887 47888888877764
No 301
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=78.96 E-value=7.6 Score=38.36 Aligned_cols=108 Identities=14% Similarity=0.175 Sum_probs=71.9
Q ss_pred HHHhHHHHhhccHHHHHHHHHHHHhhhccc-hhhhhchhHHHHHH-----HhhhhhhhhHHHHHHHhhCHHHHHHHHHhH
Q 024531 87 KMDGNALFKEEKLEEAMQQYEMAIAYMGDD-FMFQLFGKYRDMAL-----AVKNPCHLNMAACLLKLKRYEEAIGQCSLV 160 (266)
Q Consensus 87 ~~~g~~~~~~g~~~~A~~~y~~al~~~~~~-~~~~~~~~~~~~~~-----~l~~~~~~n~a~~~~~~~~~~~A~~~~~~a 160 (266)
+-+|..++..|++++|...|.++-...... .............. .....-|......+.+.+.++.++.....|
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lA 925 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 925 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 678999999999999999999975433211 11000001011000 011223566778888899999999999999
Q ss_pred hcCCCCc-h----HHHHHHHHHHHHcCCHHHHHHHHHHH
Q 024531 161 LGEDENN-V----KALFRRGKARAELGQTDAAREDFLKA 194 (266)
Q Consensus 161 l~l~p~~-~----~a~~~~g~~~~~~g~~~~A~~~~~~a 194 (266)
|...+.+ . ..|.++=..+..+|+|++|...+...
T Consensus 926 i~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~ 964 (1139)
T 4fhn_B 926 DASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVL 964 (1139)
T ss_dssp HHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHH
T ss_pred HHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhC
Confidence 9765432 2 24667778899999999998887543
No 302
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=78.67 E-value=8.1 Score=28.60 Aligned_cols=71 Identities=11% Similarity=0.067 Sum_probs=52.9
Q ss_pred HhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHH
Q 024531 94 FKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFR 173 (266)
Q Consensus 94 ~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 173 (266)
...++.++|-+.|+.|+..... ...++...|.--.+.|+...|...+.+|+.+.|.... .+.
T Consensus 71 ~ei~D~d~aR~vy~~a~~~hKk-----------------FAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~-~le 132 (161)
T 4h7y_A 71 KAIQEPDDARDYFQMARANCKK-----------------FAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLE-MLE 132 (161)
T ss_dssp HHHHCGGGCHHHHHHHHHHCTT-----------------BHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHH-HHH
T ss_pred HHhcCHHHHHHHHHHHHHHhHH-----------------HHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHH-HHH
Confidence 4448899999999999987322 2446888888888999999999999999999986443 444
Q ss_pred HHHHHHHcC
Q 024531 174 RGKARAELG 182 (266)
Q Consensus 174 ~g~~~~~~g 182 (266)
.+..-.+.|
T Consensus 133 ~a~~nl~~~ 141 (161)
T 4h7y_A 133 IALRNLNLQ 141 (161)
T ss_dssp HHHHHHHTT
T ss_pred HHHHhhhcC
Confidence 444444444
No 303
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=77.80 E-value=4 Score=26.92 Aligned_cols=32 Identities=22% Similarity=0.209 Sum_probs=27.3
Q ss_pred HHHHHHHHhHHHHhhccHHHHHHHHHHHHhhh
Q 024531 82 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYM 113 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~ 113 (266)
.+..+..+|...-..|+|.+|+..|..+++..
T Consensus 15 ~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~l 46 (86)
T 4a5x_A 15 AAATVLKRAVELDSESRYPQALVCYQEGIDLL 46 (86)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 45567778888899999999999999999875
No 304
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=77.33 E-value=4.2 Score=35.43 Aligned_cols=97 Identities=6% Similarity=0.028 Sum_probs=68.4
Q ss_pred hhhhhHHHHHHHhhCHHHHHHHHHhHhcCC---CCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--CCCHHHHHHHH
Q 024531 135 PCHLNMAACLLKLKRYEEAIGQCSLVLGED---ENNVKALFRRGKARAELGQTDAAREDFLKAGKFA--PEDKSIARELR 209 (266)
Q Consensus 135 ~~~~n~a~~~~~~~~~~~A~~~~~~al~l~---p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~--p~~~~~~~~l~ 209 (266)
.++..+|..|...|+++.|.+.+.++.... ......++..-.++...++|..+...+.++..+- ..++..+..+.
T Consensus 132 ~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk 211 (429)
T 4b4t_R 132 QAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYK 211 (429)
T ss_dssp SCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHH
Confidence 367889999999999999999999987542 2456788899999999999999999999997763 23454444443
Q ss_pred HHHH----HHHHHHHHHHHHHhcccCC
Q 024531 210 LLAE----HEKAVYKKQKEIYKGIFGP 232 (266)
Q Consensus 210 ~l~~----~~~~~~~~~~~~~~k~~~~ 232 (266)
.+.. ..+.+..+.+. |..+|..
T Consensus 212 ~~~gl~~l~~r~f~~Aa~~-f~e~~~t 237 (429)
T 4b4t_R 212 TYYGIHCLAVRNFKEAAKL-LVDSLAT 237 (429)
T ss_dssp HHHHHGGGGTSCHHHHHHH-HHHHHHH
T ss_pred HHHHHHHHHhChHHHHHHH-HHHHhcc
Confidence 3322 13344444444 4444443
No 305
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=76.25 E-value=37 Score=29.18 Aligned_cols=131 Identities=16% Similarity=0.117 Sum_probs=86.2
Q ss_pred HHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhh--------------hhchhHH-------HHH----H----H
Q 024531 81 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMF--------------QLFGKYR-------DMA----L----A 131 (266)
Q Consensus 81 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~--------------~~~~~~~-------~~~----~----~ 131 (266)
..-....+.|..+.+.|++++-...........+..+.. ..++... +.. . -
T Consensus 17 ~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~f 96 (394)
T 3txn_A 17 IKEQGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTF 96 (394)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 345567889999999999998888777655444321111 0011100 000 1 1
Q ss_pred hhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcC----CCC--chHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC---CCCH
Q 024531 132 VKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE----DEN--NVKALFRRGKARAELGQTDAAREDFLKAGKFA---PEDK 202 (266)
Q Consensus 132 l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l----~p~--~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~---p~~~ 202 (266)
+...+-..+|..|+..|+|.+|+..+.+.+.- |.. -...+....+.|..++++.++...|.++.... +.++
T Consensus 97 lr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p 176 (394)
T 3txn_A 97 LRQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPP 176 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCH
Confidence 12224457899999999999999988887642 221 24677788999999999999999999997754 2445
Q ss_pred HHHHHHHHH
Q 024531 203 SIARELRLL 211 (266)
Q Consensus 203 ~~~~~l~~l 211 (266)
.+...+..+
T Consensus 177 ~i~a~i~~~ 185 (394)
T 3txn_A 177 KVQGALDLQ 185 (394)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555544444
No 306
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=74.65 E-value=32 Score=33.22 Aligned_cols=97 Identities=18% Similarity=0.017 Sum_probs=67.0
Q ss_pred HhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHh-cCCCC-
Q 024531 89 DGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL-GEDEN- 166 (266)
Q Consensus 89 ~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al-~l~p~- 166 (266)
....+...|.++-|. ..+...|.++. .-+-+|.+|+..|++++|..+|.+|- .+.+.
T Consensus 816 l~~~L~~~~~~~~a~----eL~~~~~~t~~-----------------~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~ 874 (950)
T 4gq2_M 816 LVEKLFLFKQYNACM----QLIGWLNSDPI-----------------AVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHT 874 (950)
T ss_dssp HHHHHHHTTCHHHHH----HHGGGCCSSHH-----------------HHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSC
T ss_pred HHHHHHHhcHHHHHH----HHHhhcCCChH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCc
Confidence 344555566665443 24455555443 24679999999999999999998864 22111
Q ss_pred ---------------------chHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-CCCCHHHHH
Q 024531 167 ---------------------NVKALFRRGKARAELGQTDAAREDFLKAGKF-APEDKSIAR 206 (266)
Q Consensus 167 ---------------------~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l-~p~~~~~~~ 206 (266)
....|+.....+...+-|+-++...+.|++. .++++....
T Consensus 875 ~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~l~~ 936 (950)
T 4gq2_M 875 SQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSI 936 (950)
T ss_dssp CSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHHHHH
T ss_pred ccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCccchH
Confidence 1235668899999999999999999999974 455655443
No 307
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=74.50 E-value=5.8 Score=26.48 Aligned_cols=26 Identities=23% Similarity=0.114 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHH
Q 024531 170 ALFRRGKARAELGQTDAAREDFLKAG 195 (266)
Q Consensus 170 a~~~~g~~~~~~g~~~~A~~~~~~al 195 (266)
.+-+++..+...|.|++|+++.+++.
T Consensus 17 ~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 17 QQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 34466667777777777766555544
No 308
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=74.13 E-value=11 Score=23.92 Aligned_cols=33 Identities=9% Similarity=0.143 Sum_probs=20.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHH
Q 024531 173 RRGKARAELGQTDAAREDFLKAGKFAPEDKSIA 205 (266)
Q Consensus 173 ~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~ 205 (266)
.+|..+...|++++|..+|-+|+..-|.-.+..
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL 54 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLL 54 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHH
Confidence 356666666666666666666766666644443
No 309
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=73.38 E-value=11 Score=33.11 Aligned_cols=104 Identities=7% Similarity=-0.146 Sum_probs=66.5
Q ss_pred ccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc--------CCCC--
Q 024531 97 EKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG--------EDEN-- 166 (266)
Q Consensus 97 g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~--------l~p~-- 166 (266)
...+.|.....++...+-.+......... ...+....-+..++-.+|+++++...|...++..-. ..|.
T Consensus 140 ~~le~~a~~i~k~F~~cl~Dr~~~~~~s~-p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q 218 (455)
T 3t5v_B 140 QFLSHISSILSRLFNSIKPPRGNASSTNI-PGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQ 218 (455)
T ss_dssp HHHHHHHHHHHHHHHHCCCC----CCSSC-CHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHH
T ss_pred hHHHHHHHHHHHHHHHhcccCCCcccccc-cccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccc
Confidence 45677777788877765443221100000 001222223445677999999998888777754322 1222
Q ss_pred chHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-CCCC
Q 024531 167 NVKALFRRGKARAELGQTDAAREDFLKAGKF-APED 201 (266)
Q Consensus 167 ~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l-~p~~ 201 (266)
-...+|.+|..++..++|.+|.+++..|+.. .|.+
T Consensus 219 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 219 QIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred eEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 2356889999999999999999999999998 7754
No 310
>3qtm_A Uncharacterized protein C4B3.07; tetratricopeptide repeat, enhancer of translation terminatio translation; HET: CME; 2.15A {Schizosaccharomyces pombe} PDB: 3qtn_B
Probab=71.01 E-value=40 Score=27.33 Aligned_cols=107 Identities=14% Similarity=0.067 Sum_probs=69.9
Q ss_pred CHHHHHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhh-hhchhHHHHHHHhhhhhhhhHHHHH----HHhh-
Q 024531 75 TVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMF-QLFGKYRDMALAVKNPCHLNMAACL----LKLK- 148 (266)
Q Consensus 75 ~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~-~~~~~~~~~~~~l~~~~~~n~a~~~----~~~~- 148 (266)
+.+..+.+.-.+++........|+.+..+..++-.|--+..-... +......+....+...+++.++... ++.+
T Consensus 14 ~~~d~~sql~gly~msre~le~g~i~~sv~LLNGIIHECDRLLR~~e~~~~Lpd~FhAIYAlALl~lSELa~~a~Fk~ed 93 (346)
T 3qtm_A 14 TEEDNISQLWGLYEMSREKLENDDIDASVSLVFGTIHEADRILRNTEDISTLPKDFHAAYSSALLAVSELFEIAQKRLKE 93 (346)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHHHHHHTHHHHGGGSCT
T ss_pred eccchHHHHHhHHHHHHHHhhccCchhhhHHHcChHHHHHHHHHccCCCCCCCHHHHHHHHHHHHhHHHhhHHhhccCch
Confidence 566778888899999999999999999999887766433221110 0011122333444444442222222 2322
Q ss_pred ------CHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHc
Q 024531 149 ------RYEEAIGQCSLVLGEDENNVKALFRRGKARAEL 181 (266)
Q Consensus 149 ------~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 181 (266)
-++.|++-++-.++..|+++...+..+.++++.
T Consensus 94 e~~V~eFFDaALERielGLe~~p~s~~L~la~SKILlqr 132 (346)
T 3qtm_A 94 TNTEESYIDAAIERAQLGLDAPGNESRLFLALARAYLEK 132 (346)
T ss_dssp TCCHHHHHHHHHHHHHHGGGSSSCCHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHhhhhhCCCChhHHHHHHHHHHHH
Confidence 278899999999999999998888888887654
No 311
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=70.69 E-value=20 Score=23.69 Aligned_cols=35 Identities=23% Similarity=0.336 Sum_probs=31.1
Q ss_pred HHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhcc
Q 024531 81 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 115 (266)
Q Consensus 81 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~ 115 (266)
..+..+...|..+|+.++|.+|+..|.++.....+
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten 85 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNLSDN 85 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHccccC
Confidence 66888899999999999999999999999876544
No 312
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=69.93 E-value=20 Score=23.44 Aligned_cols=35 Identities=11% Similarity=0.079 Sum_probs=19.8
Q ss_pred CCCCchHH--HHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 024531 163 EDENNVKA--LFRRGKARAELGQTDAAREDFLKAGKF 197 (266)
Q Consensus 163 l~p~~~~a--~~~~g~~~~~~g~~~~A~~~~~~al~l 197 (266)
+||.+..+ +...|.-.-..|+|++|+..|..+++.
T Consensus 9 ~~~~~~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 9 MDPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp --CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34444433 334455555777787777777777653
No 313
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=69.41 E-value=12 Score=26.13 Aligned_cols=24 Identities=21% Similarity=0.361 Sum_probs=12.4
Q ss_pred HHHHHHHHHHhhCCCCHHHHHHHH
Q 024531 186 AAREDFLKAGKFAPEDKSIARELR 209 (266)
Q Consensus 186 ~A~~~~~~al~l~p~~~~~~~~l~ 209 (266)
.|++.|..++...|.++..+..|.
T Consensus 43 ~Aie~l~~alk~e~~~~~~k~~lr 66 (117)
T 2cpt_A 43 HAVQYFLHVVKYEAQGDKAKQSIR 66 (117)
T ss_dssp HHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCHHHHHHHH
Confidence 344445555556656665544333
No 314
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=68.29 E-value=12 Score=24.96 Aligned_cols=36 Identities=22% Similarity=0.361 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhcc
Q 024531 80 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 115 (266)
Q Consensus 80 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~ 115 (266)
+..+-.+-.++..+...|+|++||....+|..+...
T Consensus 12 Ln~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~e 47 (97)
T 2crb_A 12 LNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSE 47 (97)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 345777778899999999999999999999887644
No 315
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=67.70 E-value=44 Score=32.77 Aligned_cols=94 Identities=11% Similarity=-0.061 Sum_probs=65.2
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhc-----CCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--CCCCHHHHHHH
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLG-----EDENNVKALFRRGKARAELGQTDAAREDFLKAGKF--APEDKSIAREL 208 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~-----l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l--~p~~~~~~~~l 208 (266)
.|+-+-.+|.+.|+.++|...+...-+ ..| +...|..+-..|.+.|+.++|.+.|+...+. .|+-..... |
T Consensus 129 TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~P-dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYnt-L 206 (1134)
T 3spa_A 129 RLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLL-TLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAA-A 206 (1134)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHH-H
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCC-CHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHH-H
Confidence 467788899999999999999966432 344 6778889999999999999999999998774 566433333 3
Q ss_pred HHHHHHHHHHHHHHHHHHhcccC
Q 024531 209 RLLAEHEKAVYKKQKEIYKGIFG 231 (266)
Q Consensus 209 ~~l~~~~~~~~~~~~~~~~k~~~ 231 (266)
-.+.-+.++..++..+++..|.+
T Consensus 207 I~glcK~G~~~e~A~~Ll~EM~~ 229 (1134)
T 3spa_A 207 LQCMGRQDQDAGTIERCLEQMSQ 229 (1134)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHH
Confidence 33323333222344455666654
No 316
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=65.47 E-value=7.5 Score=25.34 Aligned_cols=35 Identities=14% Similarity=0.029 Sum_probs=15.5
Q ss_pred HHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 024531 187 AREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEI 225 (266)
Q Consensus 187 A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~~ 225 (266)
|++.|..++...|+.. .+.. +..+..++......+
T Consensus 37 aie~l~~~lk~e~d~~-~k~~---ir~K~~eY~~RAE~L 71 (83)
T 2v6y_A 37 AIEVLSQIIVLYPESV-ARTA---YEQMINEYKKRISYL 71 (83)
T ss_dssp HHHHHHHHHHHCTTCT-THHH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHH-HHHH---HHHHHHHHHHHHHHH
Confidence 3444445555566543 2222 224445555444443
No 317
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=65.41 E-value=31 Score=34.07 Aligned_cols=67 Identities=18% Similarity=-0.089 Sum_probs=52.2
Q ss_pred hhhHHHHHHHhhCHHHHHHHHHhHhc---CCC--------------------CchHHHHHHHHHHHHcCCHHHHHHHHHH
Q 024531 137 HLNMAACLLKLKRYEEAIGQCSLVLG---EDE--------------------NNVKALFRRGKARAELGQTDAAREDFLK 193 (266)
Q Consensus 137 ~~n~a~~~~~~~~~~~A~~~~~~al~---l~p--------------------~~~~a~~~~g~~~~~~g~~~~A~~~~~~ 193 (266)
.+-+|.+++..|++++|..+|.+|-. .+. ..+..|+.....+.+.+.++.+++.-+.
T Consensus 845 ~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~l 924 (1139)
T 4fhn_B 845 VYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLL 924 (1139)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 46789999999999999999988731 111 1134567788899999999999999999
Q ss_pred HHhhCC-CCHH
Q 024531 194 AGKFAP-EDKS 203 (266)
Q Consensus 194 al~l~p-~~~~ 203 (266)
|++..+ +++.
T Consensus 925 Ai~~~~~~~~~ 935 (1139)
T 4fhn_B 925 ADASKETDDED 935 (1139)
T ss_dssp HHHHCCSCCHH
T ss_pred HHHhccCCChh
Confidence 998765 4443
No 318
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.24 E-value=32 Score=23.96 Aligned_cols=75 Identities=15% Similarity=0.034 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhh-----hhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHH
Q 024531 79 RIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMF-----QLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEA 153 (266)
Q Consensus 79 ~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A 153 (266)
.-..+-.+...|...-..|+-+.|+..|+++|......... +..++.++....+..+-..|+..+-.+++.....
T Consensus 18 ~h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~nL~~v~~RL~~Le~~ 97 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRTRLEILEKG 97 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34556666777777777899999999999988765432111 2346677777777777788888888777765543
No 319
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=65.00 E-value=12 Score=28.89 Aligned_cols=52 Identities=10% Similarity=0.024 Sum_probs=35.6
Q ss_pred hhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHH-----HHHHHHHHHHcCCHH
Q 024531 134 NPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKA-----LFRRGKARAELGQTD 185 (266)
Q Consensus 134 ~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a-----~~~~g~~~~~~g~~~ 185 (266)
+.-++.+|..++-.++|.+|..++..|+...|..... +-.+--+-+-+|++.
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP 70 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMP 70 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCC
Confidence 4456778888888899999999999998887765432 222333445567654
No 320
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=63.93 E-value=42 Score=24.87 Aligned_cols=71 Identities=11% Similarity=0.061 Sum_probs=48.4
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhh-hhHHHHHHHhhCHHHHHHHHHhHh
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCH-LNMAACLLKLKRYEEAIGQCSLVL 161 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~-~n~a~~~~~~~~~~~A~~~~~~al 161 (266)
...-...|..+|+.|+|-+|-+.+..+-...+.... ..... ..-+. ...|..+.+.|++..|...+.+++
T Consensus 32 ~~~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~------er~~l---qGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al 102 (161)
T 2ijq_A 32 LRRAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNT------ESKFL---HGMVQVAAGAYKHFDFEDDDGMRSLFRTSL 102 (161)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSH------HHHHH---HHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCchHHHHHHHHHHHhcCCCch------HHHHH---HHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 344467899999999999999999988776544210 01111 11134 445666777888999998888887
Q ss_pred c
Q 024531 162 G 162 (266)
Q Consensus 162 ~ 162 (266)
.
T Consensus 103 ~ 103 (161)
T 2ijq_A 103 Q 103 (161)
T ss_dssp H
T ss_pred H
Confidence 5
No 321
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=62.09 E-value=17 Score=32.45 Aligned_cols=69 Identities=6% Similarity=-0.028 Sum_probs=49.5
Q ss_pred HHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCC
Q 024531 87 KMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDEN 166 (266)
Q Consensus 87 ~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~ 166 (266)
.-.=..|...+.|+.|.....++. .|..... ..-.+.-++.+|.++.-.++|.+|..++..|+...|.
T Consensus 235 nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~s----------n~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~ 302 (523)
T 4b4t_S 235 NLILRDFLNNGEVDSASDFISKLE--YPHTDVS----------SSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPH 302 (523)
T ss_dssp HHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSC----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSC
T ss_pred HHHHHHHHccCcHHHHHHHHhcCc--CCcccCC----------HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc
Confidence 344456677788888888888874 3432110 0112335778999999999999999999999998875
Q ss_pred c
Q 024531 167 N 167 (266)
Q Consensus 167 ~ 167 (266)
+
T Consensus 303 ~ 303 (523)
T 4b4t_S 303 N 303 (523)
T ss_dssp S
T ss_pred c
Confidence 4
No 322
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=61.27 E-value=27 Score=32.19 Aligned_cols=50 Identities=12% Similarity=0.024 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q 024531 168 VKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKA 217 (266)
Q Consensus 168 ~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~ 217 (266)
.......|...+..|+|.-|.+....++..+|+|.+++..++...+.+..
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~ 498 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGY 498 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 45677889999999999999999999999999999999999888766554
No 323
>3ub0_A Non-structural protein 6, NSP6,; feline coronavirus, primer-independen polymerase, replication; 2.60A {Feline infectious peritonitis virus}
Probab=61.20 E-value=38 Score=25.56 Aligned_cols=39 Identities=18% Similarity=0.158 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHhcccCCCCCCcccchhHHHhHHHHHHHHHHHh
Q 024531 216 KAVYKKQKEIYKGIFGPRPEPKQKKNWLIIFWQLLVSLVLGLF 258 (266)
Q Consensus 216 ~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (266)
+-.+++...||+..-...++.+-.++ ....|+|.+..+.
T Consensus 65 rMAe~Amt~MYKeARa~drksKvvSa----m~~mLF~MlrrLD 103 (199)
T 3ub0_A 65 KMAEQAAASMYKEARAVDRKSKIVSA----MHSLLFGMLKKLD 103 (199)
T ss_dssp HHHHHHHHHHTTC-----CCHHHHHH----HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHH----HHHHHHHHHHHHh
Confidence 33445555666655433333332233 3667777766554
No 324
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=58.80 E-value=17 Score=23.46 Aligned_cols=40 Identities=13% Similarity=0.095 Sum_probs=29.1
Q ss_pred CCCCHHHHHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhcc
Q 024531 72 SDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 115 (266)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~ 115 (266)
..|+..+..+ ....|..+...|+|+.|+.+|+.++.....
T Consensus 5 ~~~~~~~i~e----~~k~ARe~Al~GnYdta~~yY~g~~~qI~k 44 (78)
T 2rpa_A 5 MTMSLQMIVE----NVKLAREYALLGNYDSAMVYYQGVLDQMNK 44 (78)
T ss_dssp CSSSSHHHHH----HHHHHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHH----HHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 3345444433 346777888889999999999999987643
No 325
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=58.50 E-value=17 Score=35.20 Aligned_cols=53 Identities=13% Similarity=0.145 Sum_probs=41.2
Q ss_pred HHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 024531 140 MAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGK 196 (266)
Q Consensus 140 ~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~ 196 (266)
++..+...+.++-| ...+..-|.++..-|-+|.+|...|++++|..+|++|-.
T Consensus 816 l~~~L~~~~~~~~a----~eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~ 868 (950)
T 4gq2_M 816 LVEKLFLFKQYNAC----MQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSL 868 (950)
T ss_dssp HHHHHHHTTCHHHH----HHHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCC
T ss_pred HHHHHHHhcHHHHH----HHHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhh
Confidence 44455566666644 345677778888889999999999999999999998763
No 326
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=58.04 E-value=11 Score=34.79 Aligned_cols=48 Identities=17% Similarity=0.084 Sum_probs=43.2
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCC
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQ 183 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~ 183 (266)
.....|...+..|+|..|...++.++..+|+|..|...++.+|.++|.
T Consensus 451 ~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~ 498 (658)
T 2cfu_A 451 RLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGY 498 (658)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 456778888899999999999999999999999999999999988774
No 327
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=57.25 E-value=96 Score=26.86 Aligned_cols=72 Identities=7% Similarity=-0.094 Sum_probs=53.1
Q ss_pred HHHHHHHHHhHHHHhhccHHHHHHHHHHHHh-hhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHh
Q 024531 81 GAADRRKMDGNALFKEEKLEEAMQQYEMAIA-YMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 159 (266)
Q Consensus 81 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~-~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~ 159 (266)
..++.+..+...++..++|..|...+.++.. ..+.... ..+....+...|..+...++|.+|..+|..
T Consensus 175 ~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~-----------~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e 243 (445)
T 4b4t_P 175 EKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKY-----------ESLKLEYYNLLVKISLHKREYLEVAQYLQE 243 (445)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCC-----------HHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCc-----------HHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 4466667788889999999999999998753 2221111 233455677889999999999999999988
Q ss_pred HhcC
Q 024531 160 VLGE 163 (266)
Q Consensus 160 al~l 163 (266)
++..
T Consensus 244 ~~~~ 247 (445)
T 4b4t_P 244 IYQT 247 (445)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 8743
No 328
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=53.59 E-value=20 Score=24.01 Aligned_cols=27 Identities=11% Similarity=0.123 Sum_probs=15.7
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 024531 174 RGKARAELGQTDAAREDFLKAGKFAPE 200 (266)
Q Consensus 174 ~g~~~~~~g~~~~A~~~~~~al~l~p~ 200 (266)
+|..+...|+++.|+.+|-+|+..-|.
T Consensus 26 lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 26 LGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 455555556666666655556655554
No 329
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.92 E-value=21 Score=24.83 Aligned_cols=44 Identities=16% Similarity=0.157 Sum_probs=29.3
Q ss_pred CHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 024531 149 RYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPE 200 (266)
Q Consensus 149 ~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~ 200 (266)
.+++|..+.++||.+|.. |.-...+..|.+.+..+.+++.+..+
T Consensus 18 ~h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISSK 61 (116)
T ss_dssp HHHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhcccccc
Confidence 367788888888877642 33344455566677777778877663
No 330
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=50.26 E-value=43 Score=22.24 Aligned_cols=63 Identities=11% Similarity=-0.011 Sum_probs=39.3
Q ss_pred HHHhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 87 KMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 87 ~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
...|..+|+.|+|-+|-+.+...-...|.... .. +..-+....|..+...|+. |...+.+++.
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~--------~~---~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKATGEER--------RL---LQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCHHHH--------HH---HHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhCCCchH--------HH---HHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 35788899999999999998888766543111 11 1111333445555556666 7777777654
No 331
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=48.90 E-value=1.2e+02 Score=25.40 Aligned_cols=26 Identities=19% Similarity=0.220 Sum_probs=23.0
Q ss_pred CchHHHHHHHHHHHHcCCHHHHHHHH
Q 024531 166 NNVKALFRRGKARAELGQTDAAREDF 191 (266)
Q Consensus 166 ~~~~a~~~~g~~~~~~g~~~~A~~~~ 191 (266)
.++..+..+|..|.+-++|.+|..+|
T Consensus 134 Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 134 GDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 46788889999999999999998887
No 332
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=47.29 E-value=32 Score=26.44 Aligned_cols=34 Identities=15% Similarity=-0.013 Sum_probs=29.3
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 024531 168 VKALFRRGKARAELGQTDAAREDFLKAGKFAPED 201 (266)
Q Consensus 168 ~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~ 201 (266)
...+|.+|..++..++|.+|.+++..|+..-|.+
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~ 47 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRS 47 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHh
Confidence 3467789999999999999999999999988864
No 333
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=46.74 E-value=1.6e+02 Score=26.80 Aligned_cols=117 Identities=10% Similarity=-0.172 Sum_probs=64.8
Q ss_pred HhHHHHhhccHHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCch
Q 024531 89 DGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNV 168 (266)
Q Consensus 89 ~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~ 168 (266)
.+...+...+.+.|...|.......+-+... ...+...+|.-.+..+...++...+..+....+++.
T Consensus 220 ~~~~rlar~d~~~A~~~~~~~~~~~~~~~~~-------------~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (618)
T 1qsa_A 220 VAFASVARQDAENARLMIPSLAQAQQLNEDQ-------------IQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTS 286 (618)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHTTCCHHH-------------HHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHH
T ss_pred HHHHHHHhcCHHHHHHHHHhhhhccCCCHHH-------------HHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChH
Confidence 3444455567777777776654422111110 111223344444445534455666666655444444
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHH
Q 024531 169 KALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVY 219 (266)
Q Consensus 169 ~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~ 219 (266)
..-++.+.+ ...|++..|...|.+.-.-.+.......-+++.....++..
T Consensus 287 ~~e~~~r~A-lr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~ 336 (618)
T 1qsa_A 287 LIERRVRMA-LGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREA 336 (618)
T ss_dssp HHHHHHHHH-HHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHH-HHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHH
Confidence 444445555 46799999999998765533355777777887755544443
No 334
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=46.62 E-value=1.2e+02 Score=24.96 Aligned_cols=27 Identities=15% Similarity=-0.036 Sum_probs=23.8
Q ss_pred CchHHHHHHHHHHHHcCCHHHHHHHHH
Q 024531 166 NNVKALFRRGKARAELGQTDAAREDFL 192 (266)
Q Consensus 166 ~~~~a~~~~g~~~~~~g~~~~A~~~~~ 192 (266)
.++..|..+|..|..-+++.+|..+|-
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 467889999999999999999999874
No 335
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=42.73 E-value=49 Score=28.79 Aligned_cols=100 Identities=13% Similarity=0.010 Sum_probs=55.6
Q ss_pred HHHHHHHhHHHHhhccHHHHHHHHHHHHhhhccchh--h-hhc--hhHH-HHHHHhhhhhhhhHHHHHHHhhCHHHHHHH
Q 024531 83 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM--F-QLF--GKYR-DMALAVKNPCHLNMAACLLKLKRYEEAIGQ 156 (266)
Q Consensus 83 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~--~-~~~--~~~~-~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~ 156 (266)
...+..+++.+...++|.+|.-.+.....+..-+.. . ... +... ....++...++...+..+.+.+.|+.|+..
T Consensus 35 i~~l~~L~~~h~~~~ny~EAa~~l~lhA~l~~w~~~~~~~~~~~~~~~~~qt~~~~ke~L~~~~i~~f~kg~~~E~ai~l 114 (436)
T 2yin_A 35 IRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTHRQLKETLYETIIGYFDKGKMWEEAISL 114 (436)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSCCC--------------CHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHHHHHHHHhCCCccccCcccccCCCCccccHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 444567799999999999999887544433221100 0 000 0000 111122333455566666677789999999
Q ss_pred HHhHhcCCCCchHHHHHHHHHHHHcC
Q 024531 157 CSLVLGEDENNVKALFRRGKARAELG 182 (266)
Q Consensus 157 ~~~al~l~p~~~~a~~~~g~~~~~~g 182 (266)
|+.++.....+..-|-.++.+|..+.
T Consensus 115 ~k~L~~~yE~~~~Dy~~Ls~~~~~~a 140 (436)
T 2yin_A 115 CKELAEQYEMEIFDYELLSQNLIQQA 140 (436)
T ss_dssp HHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99887554333233555666665543
No 336
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=42.14 E-value=72 Score=21.05 Aligned_cols=31 Identities=26% Similarity=0.201 Sum_probs=21.7
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 024531 168 VKALFRRGKARAELGQTDAAREDFLKAGKFA 198 (266)
Q Consensus 168 ~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~ 198 (266)
+......|.-++..++|.+|...|+++..+.
T Consensus 53 ~r~~i~eak~~y~~~ny~ea~~l~~k~~n~t 83 (106)
T 2vkj_A 53 ARSLIAEGKDLFETANYGEALVFFEKALNLS 83 (106)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHccc
Confidence 3444555666778888888888888887654
No 337
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=40.17 E-value=33 Score=26.81 Aligned_cols=62 Identities=13% Similarity=0.009 Sum_probs=41.5
Q ss_pred HHHHHHHHHhHhcCCCCchH-------HHH-HHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 024531 150 YEEAIGQCSLVLGEDENNVK-------ALF-RRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLL 211 (266)
Q Consensus 150 ~~~A~~~~~~al~l~p~~~~-------a~~-~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l 211 (266)
.+-|+..++..-+-.|-..+ ..- ..-.+++..|.|++|.+.+++.+.-+|.+...+..|..+
T Consensus 88 LESAl~v~~~I~~e~~l~~~l~e~i~~llk~qAV~VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~~I 157 (235)
T 3bu8_A 88 LESAINVLEMIKTEFTLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNI 157 (235)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 55677766665443332111 111 223456789999999999999999888888777777765
No 338
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=39.37 E-value=80 Score=20.77 Aligned_cols=14 Identities=21% Similarity=0.064 Sum_probs=7.1
Q ss_pred HHHHHHHHHhhCCC
Q 024531 187 AREDFLKAGKFAPE 200 (266)
Q Consensus 187 A~~~~~~al~l~p~ 200 (266)
|++.|..++...|+
T Consensus 41 Aie~l~~alk~e~~ 54 (93)
T 1wfd_A 41 GIDMLLQVLKGTKE 54 (93)
T ss_dssp HHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHCCC
Confidence 44445555555655
No 339
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=39.32 E-value=52 Score=29.03 Aligned_cols=27 Identities=15% Similarity=0.117 Sum_probs=23.3
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
++..+|.+|+-.++|++|+..+++++.
T Consensus 205 A~allArvyL~~~~~~~A~~~a~~vi~ 231 (495)
T 3lew_A 205 VLGILSRACLYARQWEKAKTYSDKLLA 231 (495)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 667788999999999999999998874
No 340
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=37.73 E-value=59 Score=28.23 Aligned_cols=27 Identities=11% Similarity=0.071 Sum_probs=23.3
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
++..+|.+|+-.++|++|+..++.++.
T Consensus 192 a~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 192 ARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 677788999999999999999998874
No 341
>3ph0_C ASCG; type III secretion system, chapero; 2.40A {Aeromonas hydrophila}
Probab=37.38 E-value=66 Score=19.23 Aligned_cols=50 Identities=16% Similarity=0.027 Sum_probs=25.7
Q ss_pred hhHHHHHHHhhCHHHHHHHHHhHhcCCCCc-hHHHHHHHHHHHHcCCHHHHH
Q 024531 138 LNMAACLLKLKRYEEAIGQCSLVLGEDENN-VKALFRRGKARAELGQTDAAR 188 (266)
Q Consensus 138 ~n~a~~~~~~~~~~~A~~~~~~al~l~p~~-~~a~~~~g~~~~~~g~~~~A~ 188 (266)
-.+|..-....+.++|....+- |...+.. .-+-.-+...+++.|+|++|+
T Consensus 10 Ae~AL~~TG~HcH~EA~tIA~~-L~~~~~~eE~v~mIr~~SLmNrG~Yq~Al 60 (61)
T 3ph0_C 10 AELALAGTGHHCHQEAASIADW-LAQEECMAECVTLIRLSSLMNQGDYQRAL 60 (61)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHH-HHTSSTTHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHccchHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHccchHhHhh
Confidence 3344444445567777766644 4444553 344556778899999999986
No 342
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=36.27 E-value=1.1e+02 Score=22.06 Aligned_cols=43 Identities=14% Similarity=0.127 Sum_probs=36.5
Q ss_pred CCCCCHHHHHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhh
Q 024531 71 RSDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYM 113 (266)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~ 113 (266)
....++..-+..+..+...|..+...|+++.|--.|.+.+.+.
T Consensus 28 ~~~i~l~~ylrta~~llr~A~~y~~egd~e~AYily~R~~~L~ 70 (146)
T 2xze_A 28 NEDIPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLF 70 (146)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 3445677788999999999999999999999999999976544
No 343
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=35.26 E-value=69 Score=27.86 Aligned_cols=27 Identities=15% Similarity=0.153 Sum_probs=22.9
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
++..+|.+|+-.++|++|+..++.++.
T Consensus 198 a~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 198 AMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 567788888889999999999988874
No 344
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=34.79 E-value=78 Score=27.47 Aligned_cols=46 Identities=11% Similarity=-0.177 Sum_probs=33.9
Q ss_pred HHHHHHHHhHhcCCC--------CchHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 024531 151 EEAIGQCSLVLGEDE--------NNVKALFRRGKARAELGQTDAAREDFLKAGK 196 (266)
Q Consensus 151 ~~A~~~~~~al~l~p--------~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~ 196 (266)
+..+.+++.|+.+=| +..-|+-.+|.+|+.+++|++|....+.++.
T Consensus 165 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 165 DFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 445555555554323 2345788899999999999999999999885
No 345
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=34.79 E-value=1.1e+02 Score=26.74 Aligned_cols=49 Identities=16% Similarity=0.087 Sum_probs=38.1
Q ss_pred HHHHHHHHHhHhcCCCC--------chHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 024531 150 YEEAIGQCSLVLGEDEN--------NVKALFRRGKARAELGQTDAAREDFLKAGKFA 198 (266)
Q Consensus 150 ~~~A~~~~~~al~l~p~--------~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~ 198 (266)
|+..+.+++.|+.+=|. ..-|+-.+|.+|+.+++|++|....++++...
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 56667777777765443 24577789999999999999999999998753
No 346
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=40.69 E-value=8.4 Score=35.73 Aligned_cols=52 Identities=17% Similarity=0.118 Sum_probs=44.3
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHH
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAA 187 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A 187 (266)
.....|...+..|+|..|...++.++..+|+|..|...++.+|.++|.-.+.
T Consensus 463 ~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~~ 514 (668)
T 2yhe_A 463 AVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTEN 514 (668)
Confidence 4556778888899999999999999999999999999999999998866444
No 347
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=33.96 E-value=98 Score=20.24 Aligned_cols=38 Identities=11% Similarity=-0.023 Sum_probs=31.0
Q ss_pred CHHHHHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhh
Q 024531 75 TVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAY 112 (266)
Q Consensus 75 ~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~ 112 (266)
...+.++.+..+.+.|..++..||+..|+..+.-+-..
T Consensus 31 ~a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~Gw 68 (87)
T 2pmr_A 31 DEEAVVERALNYRDDSVYYLEKGDHITSFGCITYAHGL 68 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 44566788999999999999999999999887665544
No 348
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=33.89 E-value=1e+02 Score=20.30 Aligned_cols=64 Identities=13% Similarity=0.024 Sum_probs=34.2
Q ss_pred HHHHHHHHhHHHHhh---ccHHHHHHHHHHHHhhhccchhh--hhchhHHHHHHHhhhhhhhhHHHHHH
Q 024531 82 AADRRKMDGNALFKE---EKLEEAMQQYEMAIAYMGDDFMF--QLFGKYRDMALAVKNPCHLNMAACLL 145 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~---g~~~~A~~~y~~al~~~~~~~~~--~~~~~~~~~~~~l~~~~~~n~a~~~~ 145 (266)
.+=.+...|...-.. |+-+.|+..|.+++......... ...++.++....+..+-..|+..+-.
T Consensus 15 ~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~LQ~KM~~nL~~v~~ 83 (89)
T 3eab_A 15 QAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAKMMTNLVMAKD 83 (89)
T ss_dssp HHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHHHHHHHHHHHHHHHH
Confidence 344455566666566 77778888888877654322111 11344455544444444445544443
No 349
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=33.86 E-value=99 Score=20.19 Aligned_cols=36 Identities=17% Similarity=0.141 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhh
Q 024531 77 EERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAY 112 (266)
Q Consensus 77 ~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~ 112 (266)
.+.++.+..+.+.|..++..||+..|+..+.-+-..
T Consensus 29 ~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~Gw 64 (86)
T 2oo2_A 29 EGFMRNIEAYISDSRYFLEKGDLVRAFECVVWAWAW 64 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 566788999999999999999999999987766544
No 350
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=33.37 E-value=73 Score=27.80 Aligned_cols=55 Identities=13% Similarity=0.173 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHhhhccchhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 99 LEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 99 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
|+.-+..+..|+...|..... + ..-...++..+|.+|+-.++|++|+..++.++.
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~---g------r~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 230 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSN---G------YINYWAAQALLSRVYLNMGEYQKAYDAATDVIK 230 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCT---T------SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccC---C------cCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 555566666666666542110 0 000223677889999999999999999999985
No 351
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=32.57 E-value=1.1e+02 Score=20.27 Aligned_cols=30 Identities=10% Similarity=0.124 Sum_probs=19.8
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 024531 183 QTDAAREDFLKAGKFAPEDKSIARELRLLA 212 (266)
Q Consensus 183 ~~~~A~~~~~~al~l~p~~~~~~~~l~~l~ 212 (266)
+..+++..-..+++.+|+||.++..+....
T Consensus 31 ~~~~~l~~Al~~L~~~psNPa~LAe~Qa~l 60 (92)
T 2g0u_A 31 DLNKQLQDAQANLTKNPSDPTALANYQMIM 60 (92)
T ss_dssp HHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 344555555666677888888876666543
No 352
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=32.12 E-value=28 Score=26.80 Aligned_cols=62 Identities=15% Similarity=0.050 Sum_probs=35.9
Q ss_pred HHHHHHHHHhHhcCCCCch---HH--HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 024531 150 YEEAIGQCSLVLGEDENNV---KA--LFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLL 211 (266)
Q Consensus 150 ~~~A~~~~~~al~l~p~~~---~a--~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l 211 (266)
.+-|+..++..-+-.+.-. .- --..-.+++..|.|++|.+.+++.+.-+|.+...+..|..+
T Consensus 94 LESAl~v~~~I~~e~~~lheei~~Llk~qAV~VCiekg~Fk~A~eiLkr~f~~~~~~~~lr~kL~~I 160 (211)
T 3bqo_A 94 LESALMIWGSIEKEHDKLHEEIQNLIKIQAIAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMI 160 (211)
T ss_dssp HHHHHHHHTTSCSCCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHC-----CCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 5566666655433332111 11 11234578899999999999999999888877776666655
No 353
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=31.34 E-value=1e+02 Score=19.66 Aligned_cols=17 Identities=12% Similarity=0.077 Sum_probs=9.5
Q ss_pred HcCCHHHHHHHHHHHHh
Q 024531 180 ELGQTDAAREDFLKAGK 196 (266)
Q Consensus 180 ~~g~~~~A~~~~~~al~ 196 (266)
..|+|++|+..|..+++
T Consensus 25 ~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 25 TATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHH
Confidence 45666555555555544
No 354
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=31.26 E-value=93 Score=27.37 Aligned_cols=30 Identities=17% Similarity=-0.233 Sum_probs=26.8
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 024531 168 VKALFRRGKARAELGQTDAAREDFLKAGKF 197 (266)
Q Consensus 168 ~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 197 (266)
.-|+-.+|.+|+.+++|++|....++++..
T Consensus 203 ~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 203 EVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 457788999999999999999999999875
No 355
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=30.56 E-value=88 Score=27.18 Aligned_cols=48 Identities=19% Similarity=-0.038 Sum_probs=35.0
Q ss_pred HHHHHHHHHhHhcCCC--------CchHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 024531 150 YEEAIGQCSLVLGEDE--------NNVKALFRRGKARAELGQTDAAREDFLKAGKF 197 (266)
Q Consensus 150 ~~~A~~~~~~al~l~p--------~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 197 (266)
|+..+.+++.|+.+=| +..-|+-.+|.+|+.+|+|++|....+.++..
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 3455555666554333 23457788999999999999999999999863
No 356
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=29.47 E-value=2.4e+02 Score=24.49 Aligned_cols=48 Identities=13% Similarity=0.144 Sum_probs=36.9
Q ss_pred CchHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCCHHHHHHHHHHHH
Q 024531 166 NNVKALFRRGKARAELGQTDAAREDFLKAGKF------APEDKSIARELRLLAE 213 (266)
Q Consensus 166 ~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l------~p~~~~~~~~l~~l~~ 213 (266)
.+.-.|..+|-.++..++|.+|+..+..+-.. .-+|.++.+++..+..
T Consensus 301 ~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~~eIan 354 (489)
T 4gq4_A 301 EHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVAN 354 (489)
T ss_dssp CCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHHHHHHH
T ss_pred CcccceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccccchHHHHHHHHHHHH
Confidence 45566778899999999999999999887552 4567888888776643
No 357
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=29.23 E-value=12 Score=30.24 Aligned_cols=38 Identities=18% Similarity=0.129 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhHHHHhhccHHHHHHHHHHHHhhhcc
Q 024531 78 ERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 115 (266)
Q Consensus 78 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~ 115 (266)
.....|-.+..+|..+-+.|+|.+|+..|..|+++.-.
T Consensus 18 p~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~ 55 (257)
T 2ymb_A 18 PQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQ 55 (257)
T ss_dssp --------------------------------------
T ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 34455677778888899999999999999999987643
No 358
>2lj4_A Peptidyl-prolyl CIS-trans isomerase/rotamase, PUT; tbpin1; NMR {Trypanosoma brucei}
Probab=29.08 E-value=24 Score=24.41 Aligned_cols=20 Identities=20% Similarity=0.270 Sum_probs=18.0
Q ss_pred ccchhHHHHhhcCCCCcEEE
Q 024531 8 KEMTGLAIGVSSMKAGEHAL 27 (266)
Q Consensus 8 ~~~~gl~~~l~~m~~gE~~~ 27 (266)
+.++-|+.++..|++||++.
T Consensus 81 ~~~~~f~~a~~~l~~GeiS~ 100 (115)
T 2lj4_A 81 EMMKPFEDAVRALKIGDISP 100 (115)
T ss_dssp SSCHHHHHHHTTSCBTCBCC
T ss_pred CCCchHHHHHhcCCCCCCCC
Confidence 67899999999999999875
No 359
>4abx_A DNA repair protein RECN; DNA binding protein, ATP binding protein, double break repair, coiled-coil; HET: DNA; 2.04A {Deinococcus radiodurans}
Probab=27.13 E-value=1.3e+02 Score=22.23 Aligned_cols=69 Identities=16% Similarity=0.088 Sum_probs=47.3
Q ss_pred HHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 024531 150 YEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKE 224 (266)
Q Consensus 150 ~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~~~~~~~ 224 (266)
...|...+..+...+|......-++..++..+.+....+..|..-+..||. .|..+..++.....=.++
T Consensus 72 L~~a~~~L~~l~~~d~~l~~~~e~l~~a~~~l~d~~~~L~~y~~~le~DP~------rL~~ie~RL~~l~~L~RK 140 (175)
T 4abx_A 72 IGEAVRALNAGAKYDETVMQLQNELRAALESVQAIAGELRDVAEGSAADPE------ALDRVEARLSALSKLKNK 140 (175)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHH------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHHHH
Confidence 345666666677788877778888899999998888888888777777763 244444555554444333
No 360
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=27.10 E-value=95 Score=26.42 Aligned_cols=61 Identities=7% Similarity=-0.222 Sum_probs=44.5
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhc-------CCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLG-------EDEN-NVKALFRRGKARAELGQTDAAREDFLKAGK 196 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~-------l~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~ 196 (266)
+....+..|+..++...|..+.+++-. .+|. +...|...+..|...++|..+..+.-..+.
T Consensus 129 i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 129 IDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 345678889999999999998887752 2332 234455567778889999998888777775
No 361
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=26.92 E-value=1.9e+02 Score=21.15 Aligned_cols=29 Identities=10% Similarity=0.014 Sum_probs=25.0
Q ss_pred hhhhhHHHHHHHhhCHHHHHHHHHhHhcC
Q 024531 135 PCHLNMAACLLKLKRYEEAIGQCSLVLGE 163 (266)
Q Consensus 135 ~~~~n~a~~~~~~~~~~~A~~~~~~al~l 163 (266)
+.+..+|.+|-+.|+..+|-+...+|.+-
T Consensus 126 ~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 126 SILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 36889999999999999999988888754
No 362
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=25.68 E-value=1.3e+02 Score=26.36 Aligned_cols=27 Identities=11% Similarity=0.096 Sum_probs=24.0
Q ss_pred hhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 136 CHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 136 ~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
++..+|.+|+-.++|++|+..++.++.
T Consensus 182 A~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 182 AYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 677789999999999999999999874
No 363
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=25.16 E-value=1.5e+02 Score=25.70 Aligned_cols=31 Identities=19% Similarity=-0.159 Sum_probs=27.3
Q ss_pred chHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 024531 167 NVKALFRRGKARAELGQTDAAREDFLKAGKF 197 (266)
Q Consensus 167 ~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 197 (266)
..-|+-.+|.+|+.+++|++|....+.++..
T Consensus 190 k~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 190 TDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 4457888999999999999999999999864
No 364
>3s6n_M SurviVal motor neuron protein; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2leh_B
Probab=25.02 E-value=54 Score=17.41 Aligned_cols=16 Identities=31% Similarity=0.152 Sum_probs=10.6
Q ss_pred CHHHHHHHHHHHHhhC
Q 024531 183 QTDAAREDFLKAGKFA 198 (266)
Q Consensus 183 ~~~~A~~~~~~al~l~ 198 (266)
-|++|+..|+.++..+
T Consensus 17 ayDKAVaSfk~alk~~ 32 (37)
T 3s6n_M 17 AYDKAVASFKHALKNG 32 (37)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 3677777777776543
No 365
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=24.87 E-value=1.3e+02 Score=26.04 Aligned_cols=28 Identities=18% Similarity=0.039 Sum_probs=25.0
Q ss_pred hhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 135 PCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 135 ~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
.++..+|.+|+-+++|++|...++.++.
T Consensus 192 aA~aLlARvyL~~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 192 VVNGLMARAYLLTGQWGEAAKAAEAARK 219 (460)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 3677889999999999999999999985
No 366
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=24.55 E-value=1.3e+02 Score=26.51 Aligned_cols=50 Identities=20% Similarity=0.215 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhhcc--------chhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHHhHhc
Q 024531 99 LEEAMQQYEMAIAYMGD--------DFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 162 (266)
Q Consensus 99 ~~~A~~~y~~al~~~~~--------~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~~al~ 162 (266)
|+.-+..+..|+...|. ... ...++..+|.+|+-.++|++|...+++++.
T Consensus 153 ~~~I~~dL~~A~~~Lp~~~~~~~~gr~t--------------k~aA~allarv~L~~~~~~~A~~~a~~vi~ 210 (517)
T 3qnk_A 153 YDFILEDLKKATEMLPASYGSREKGRAT--------------KGAAYALKSRVELYDKRYEDVIKSCAEVYK 210 (517)
T ss_dssp HHHHHHHHHHHHHHSCSCCCSTTTTSCC--------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCccccCCcccCccc--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 367
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=24.43 E-value=2.4e+02 Score=24.11 Aligned_cols=59 Identities=12% Similarity=0.113 Sum_probs=0.0
Q ss_pred HHHHHHhHhcC-----CCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCCHHHHHHHHHH
Q 024531 153 AIGQCSLVLGE-----DENNVKALFRRGKARAELGQTDAAREDFLKAGKF------APEDKSIARELRLL 211 (266)
Q Consensus 153 A~~~~~~al~l-----~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l------~p~~~~~~~~l~~l 211 (266)
++..|.+|+.. ...+.-.|..+|-.+++.+++.+|+..+-.+-.. .-+|.++.+++-.+
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eI 345 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGYVAGKYNYSKDDEEMYKEFHEI 345 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHH
No 368
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=24.07 E-value=1.5e+02 Score=18.95 Aligned_cols=25 Identities=20% Similarity=0.154 Sum_probs=14.6
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHh
Q 024531 172 FRRGKARAELGQTDAAREDFLKAGK 196 (266)
Q Consensus 172 ~~~g~~~~~~g~~~~A~~~~~~al~ 196 (266)
..+|.=|..+|+|+.|+.+|+-++.
T Consensus 16 ~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 16 VKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHH
Confidence 3455555566666666666665554
No 369
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=29.66 E-value=17 Score=33.76 Aligned_cols=51 Identities=14% Similarity=-0.053 Sum_probs=43.4
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHH
Q 024531 168 VKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAV 218 (266)
Q Consensus 168 ~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l~~l~~~~~~~ 218 (266)
.......|...+..|+|.-|.+..+.++..+|+|.+++..++...+.+...
T Consensus 461 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~ 511 (668)
T 2yhe_A 461 ADAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQ 511 (668)
Confidence 346777888889999999999999999999999999999888876665543
No 370
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=22.94 E-value=1.9e+02 Score=19.76 Aligned_cols=49 Identities=16% Similarity=0.076 Sum_probs=30.2
Q ss_pred hhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHH
Q 024531 138 LNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDF 191 (266)
Q Consensus 138 ~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~ 191 (266)
.-+...++..|+|++|....+..- .+..--.++.|--++|--+++...+
T Consensus 44 lIR~sSLmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce~rlGl~s~le~rL 92 (116)
T 2p58_C 44 LIRLSSLMNRGDYASALQQGNKLA-----YPDLEPWLALCEYRLGLGSALESRL 92 (116)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTTSC-----CGGGHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHcchhHHHHHHhcCCCC-----CchHHHHHHHHHHhcccHHHHHHHH
Confidence 345566677777777777554433 3333444566666777777777665
No 371
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=22.86 E-value=2.7e+02 Score=21.66 Aligned_cols=49 Identities=12% Similarity=0.086 Sum_probs=35.4
Q ss_pred HHHHHHHhHhcCC--CCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 024531 152 EAIGQCSLVLGED--ENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPE 200 (266)
Q Consensus 152 ~A~~~~~~al~l~--p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~ 200 (266)
.+...|....... -..+..|-..|..+...|+|.+|...|+..++..-.
T Consensus 132 ~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 182 (223)
T 4aez_C 132 EPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAK 182 (223)
T ss_dssp CHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCB
T ss_pred CHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 4445555444332 234556667899999999999999999999997644
No 372
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=22.44 E-value=1.3e+02 Score=20.46 Aligned_cols=29 Identities=17% Similarity=0.156 Sum_probs=21.9
Q ss_pred CchHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 024531 166 NNVKALFRRGKARAELGQTDAAREDFLKA 194 (266)
Q Consensus 166 ~~~~a~~~~g~~~~~~g~~~~A~~~~~~a 194 (266)
.+.+..+.-|.-..+.|+|++|.+.++.+
T Consensus 18 G~ArS~~~eAl~~Ak~g~fe~A~~~l~eA 46 (105)
T 2e2a_A 18 GDARSKLLEALKAAENGDFAKADSLVVEA 46 (105)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 35566666677777899999999888765
No 373
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=22.29 E-value=1.8e+02 Score=19.84 Aligned_cols=50 Identities=18% Similarity=0.016 Sum_probs=34.0
Q ss_pred hhhHHHHHHHhhCHHHHHHHHHhHhcCCCCchHHHHHHHHHHHHcCCHHHHHHHH
Q 024531 137 HLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDF 191 (266)
Q Consensus 137 ~~n~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~ 191 (266)
-.-+...++..|+|++|....+..- .+..--.++.|--++|--+++...+
T Consensus 42 ~lIR~sSLmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce~rlGl~s~le~rL 91 (115)
T 2uwj_G 42 RLIRISSLANQGRYQEALAFAHGNP-----WPALEPWFALCEWHLGLGAALDRRL 91 (115)
T ss_dssp HHHHHHHHHHTTCHHHHHGGGTTCC-----CGGGHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHcchhHHHHHHhcCCCC-----CchHHHHHHHHHHhcccHHHHHHHH
Confidence 3345667778888888876543332 4444455677778888888888777
No 374
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=21.75 E-value=1.3e+02 Score=20.26 Aligned_cols=29 Identities=17% Similarity=0.180 Sum_probs=20.7
Q ss_pred CchHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 024531 166 NNVKALFRRGKARAELGQTDAAREDFLKA 194 (266)
Q Consensus 166 ~~~~a~~~~g~~~~~~g~~~~A~~~~~~a 194 (266)
.+.+..+.-|.-..+.|+|++|.+.++.+
T Consensus 16 G~Ars~~~eAl~~Ak~g~fe~A~~~l~eA 44 (103)
T 1wcr_A 16 GQARSLAYAALKQAKQGDFAAAKAMMDQS 44 (103)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 34556666666777888888888887655
No 375
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=20.71 E-value=3e+02 Score=24.00 Aligned_cols=59 Identities=8% Similarity=0.100 Sum_probs=0.0
Q ss_pred HHHHHHhHhcC-----CCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCCHHHHHHHHHH
Q 024531 153 AIGQCSLVLGE-----DENNVKALFRRGKARAELGQTDAAREDFLKAGKF------APEDKSIARELRLL 211 (266)
Q Consensus 153 A~~~~~~al~l-----~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l------~p~~~~~~~~l~~l 211 (266)
++..|.+|+.. ...+.-.|..+|-.|++.++|.+|+..+-.+-.. .-+|.++.+++-.+
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eI 367 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEV 367 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHH
No 376
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=20.51 E-value=1.7e+02 Score=25.36 Aligned_cols=49 Identities=20% Similarity=0.071 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhhcc--------------------chhhhhchhHHHHHHHhhhhhhhhHHHHHHHhhCHHHHHHHHH
Q 024531 99 LEEAMQQYEMAIAYMGD--------------------DFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCS 158 (266)
Q Consensus 99 ~~~A~~~y~~al~~~~~--------------------~~~~~~~~~~~~~~~~l~~~~~~n~a~~~~~~~~~~~A~~~~~ 158 (266)
|+.-+..+..|+...|. ... ...++..+|.+|+-.++|++|+..++
T Consensus 156 y~~I~~DL~~A~~~Lp~~~~~~~~~~~~~~~~~~~~~r~t--------------k~aA~allarvyL~~~~~~~A~~~a~ 221 (478)
T 3hdx_A 156 LSYAKAELLTAIEDLPYQYGTQTNLYYGSYGAQWQGKLFN--------------KLSAYSVLAHICAWQGNYAEAETYSA 221 (478)
T ss_dssp HHHHHHHHHHHHHHCCSSCCCSSSCBTTBCGGGGTTTSCC--------------HHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCcccccccccccccccccc--------------HHHHHHHHHHHHHHHhhHHHHHHHHH
Q ss_pred hHh
Q 024531 159 LVL 161 (266)
Q Consensus 159 ~al 161 (266)
+++
T Consensus 222 ~vi 224 (478)
T 3hdx_A 222 FII 224 (478)
T ss_dssp HHH
T ss_pred HHH
No 377
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=20.46 E-value=2.2e+02 Score=20.42 Aligned_cols=29 Identities=17% Similarity=0.080 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 024531 169 KALFRRGKARAELGQTDAAREDFLKAGKF 197 (266)
Q Consensus 169 ~a~~~~g~~~~~~g~~~~A~~~~~~al~l 197 (266)
.-+++.|.+|..-|+.+.|.-.|.+...+
T Consensus 41 ~~llr~A~~y~~egd~e~AYily~R~~~L 69 (146)
T 2xze_A 41 VEIIRMASIYSEEGNIEHAFILYNKYITL 69 (146)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 44666789999999999999999886554
Done!